> SA1 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSQ010000002.1 238651 239277 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSQ010000002.1 238651 239277 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_JBBJSQ010000001.1 486856 487545 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_JBBJSQ010000001.1 487566 488234 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase I (EC 4.2.1.10) NZ_JBBJSQ010000002.1 349102 349887 13 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSQ010000001.1 418516 418953 Metabolism of Aromatic Compounds Quinate degradation Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) NZ_JBBJSQ010000001.1 1214459 1215223 Metabolism of Aromatic Compounds Biphenyl Degradation 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) NZ_JBBJSQ010000003.1 33952 34911 Metabolism of Aromatic Compounds Biphenyl Degradation biphenyl-2,3-diol 1,2-dioxygenase III-related protein NZ_JBBJSQ010000001.1 1269059 1268679 Metabolism of Aromatic Compounds Benzoate degradation benzoate MFS transporter BenK NZ_JBBJSQ010000003.1 182029 180809 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) NZ_JBBJSQ010000007.1 188633 190054 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) NZ_JBBJSQ010000007.1 188049 188630 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) NZ_JBBJSQ010000007.1 190071 190295 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_JBBJSQ010000008.1 259475 260956 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_JBBJSQ010000008.1 254905 259458 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) NZ_JBBJSQ010000002.1 548235 549815 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II NZ_JBBJSQ010000004.1 378443 378805 9 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_JBBJSQ010000001.1 810219 811553 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_JBBJSQ010000004.1 377202 378428 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSQ010000009.1 105043 104594 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_JBBJSQ010000005.1 359450 358560 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_JBBJSQ010000005.1 358548 356632 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase Phosphoenolpyruvate phosphomutase (EC 5.4.2.9) NZ_JBBJSQ010000002.1 168539 170056 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) NZ_JBBJSQ010000002.1 171172 173013 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase Phosphonopyruvate decarboxylase (EC 4.1.1.82) NZ_JBBJSQ010000002.1 170049 171179 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSQ010000003.1 422642 421116 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSQ010000003.1 421042 418919 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSQ010000001.1 348247 349221 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSQ010000001.1 195608 196606 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSQ010000001.1 136661 137377 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_JBBJSQ010000001.1 383538 384197 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSQ010000003.1 421042 418919 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSQ010000001.1 137370 139142 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSQ010000003.1 232682 231426 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSQ010000003.1 422642 421116 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase like protein NZ_JBBJSQ010000003.1 96996 98288 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSQ010000003.1 378954 377626 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSQ010000007.1 308315 309241 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) NZ_JBBJSQ010000001.1 578464 579489 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) NZ_JBBJSQ010000001.1 582060 582875 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) NZ_JBBJSQ010000001.1 580859 582073 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) NZ_JBBJSQ010000001.1 580236 580862 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSQ010000001.1 804709 804933 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSQ010000015.1 44570 44902 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSQ010000015.1 44899 45384 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSQ010000003.1 197728 198870 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSQ010000003.1 37912 37481 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSQ010000015.1 45350 46144 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSQ010000015.1 42725 43081 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSQ010000002.1 36301 37506 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSQ010000005.1 227070 226210 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSQ010000001.1 1061832 1063547 Stress Response Bacterial hemoglobins Cyanoglobin NZ_JBBJSQ010000005.1 101437 101075 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSQ010000002.1 106422 106012 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSQ010000006.1 315876 317684 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSQ010000006.1 181480 181250 Stress Response Uptake of selenate and selenite Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) NZ_JBBJSQ010000008.1 283853 284926 Stress Response Glutathionylspermidine and Trypanothione Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2 NZ_JBBJSQ010000004.1 279304 280563 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSQ010000005.1 388099 387509 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSQ010000005.1 248262 247843 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSQ010000001.1 377747 378355 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSQ010000002.1 388239 388781 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSQ010000009.1 105043 104594 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSQ010000001.1 491664 492116 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSQ010000009.1 153954 154388 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSQ010000007.1 91380 92264 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSQ010000005.1 247330 247779 Stress Response Glutathione: Non-redox reactions Lactoylglutathione lyase (EC 4.4.1.5) NZ_JBBJSQ010000003.1 16487 16059 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSQ010000007.1 91380 92264 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSQ010000005.1 388099 387509 36 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSQ010000008.1 145712 146188 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSQ010000001.1 981187 982137 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) NZ_JBBJSQ010000006.1 177716 179200 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSQ010000001.1 982137 983660 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSQ010000001.1 982137 983660 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) NZ_JBBJSQ010000006.1 179222 180424 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSQ010000003.1 389023 390543 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSQ010000010.1 58863 59690 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_JBBJSQ010000005.1 126613 124871 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSQ010000001.1 532099 533070 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSQ010000002.1 388239 388781 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSQ010000009.1 153217 153687 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSQ010000001.1 105816 106310 > SA6 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Salicylate hydroxylase (EC 1.14.13.1) NZ_JBBJSP010000004.1 146601 146362 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSP010000003.1 201644 202549 11 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_JBBJSP010000001.1 225974 226624 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_JBBJSP010000001.1 225261 225977 Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSP010000003.1 201644 202549 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSP010000002.1 405826 405380 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase I (EC 4.2.1.10) NZ_JBBJSP010000002.1 279060 278293 Metabolism of Aromatic Compounds Salicylate ester degradation Salicylate hydroxylase (EC 1.14.13.1) NZ_JBBJSP010000004.1 146601 146362 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) NZ_JBBJSP010000005.1 227388 225967 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) NZ_JBBJSP010000005.1 228005 227391 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) NZ_JBBJSP010000005.1 225726 225262 Nitrogen Metabolism Denitrifying reductase gene clusters Respiratory nitrate reductase gamma chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 403331 404002 Nitrogen Metabolism Denitrifying reductase gene clusters Respiratory nitrate reductase delta chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 402780 403334 Nitrogen Metabolism Denitrifying reductase gene clusters Respiratory nitrate reductase beta chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 401291 402754 Nitrogen Metabolism Denitrifying reductase gene clusters Respiratory nitrate reductase alpha chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 397615 401301 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_JBBJSP010000002.1 113762 111846 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_JBBJSP010000002.1 114663 113773 19 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSP010000003.1 62494 62054 Nitrogen Metabolism Nitrate and nitrite ammonification Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) NZ_JBBJSP010000006.1 26665 29082 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase gamma chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 403331 404002 Nitrogen Metabolism Nitrate and nitrite ammonification Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) NZ_JBBJSP010000006.1 29114 29434 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase alpha chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 397615 401301 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase beta chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 401291 402754 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase delta chain (EC 1.7.99.4) NZ_JBBJSP010000001.1 402780 403334 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_JBBJSP010000001.1 470841 469627 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_JBBJSP010000003.1 928985 930319 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II NZ_JBBJSP010000001.1 469615 469265 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_JBBJSP010000002.1 18667 14105 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_JBBJSP010000002.1 14088 12607 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) NZ_JBBJSP010000004.1 215584 217161 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSP010000002.1 859105 857366 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSP010000003.1 67102 65726 Phosphorus Metabolism Phosphate metabolism Pyrophosphatase PpaX (EC 3.6.1.1) NZ_JBBJSP010000001.1 651664 652314 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSP010000002.1 480061 479102 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSP010000003.1 402364 401363 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSP010000002.1 859820 859098 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSP010000003.1 600018 601346 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSP010000001.1 55849 54920 Phosphorus Metabolism Phosphate metabolism Sodium-dependent phosphate transporter NZ_JBBJSP010000002.1 485323 486246 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSP010000006.1 62596 61748 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) NZ_JBBJSP010000001.1 1059262 1060734 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, permease protein OpuBB NZ_JBBJSP010000001.1 774778 775431 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, permease protein OpuBD NZ_JBBJSP010000001.1 776380 777069 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, choline-binding protein OpuBC NZ_JBBJSP010000001.1 775445 776362 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSP010000006.1 61748 60867 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSP010000006.1 63854 62598 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSP010000002.1 958128 959666 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, ATP-binding protein OpuBA NZ_JBBJSP010000001.1 773613 774755 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) NZ_JBBJSP010000001.1 1060751 1061959 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSP010000003.1 51140 51964 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSP010000004.1 2241 1804 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSP010000002.1 104068 104913 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSP010000003.1 433802 433359 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSP010000003.1 432902 433327 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSP010000002.1 451674 451066 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSP010000002.1 115340 114750 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSP010000002.1 315907 315458 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSP010000003.1 542814 543356 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSP010000003.1 62494 62054 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSP010000002.1 170616 170134 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSP010000002.1 104068 104913 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSP010000002.1 115340 114750 Stress Response Periplasmic Stress Response Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage NZ_JBBJSP010000003.1 774562 775824 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSP010000003.1 917932 918153 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSP010000001.1 743166 741955 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSP010000005.1 118177 117695 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSP010000005.1 118503 118174 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSP010000005.1 119985 119584 Stress Response SigmaB stress responce regulation RsbR, positive regulator of sigma-B NZ_JBBJSP010000002.1 429428 428592 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSP010000005.1 120354 119989 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSP010000005.1 117729 116941 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSP010000002.1 819513 817717 38 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSP010000001.1 612082 612306 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSP010000001.1 82159 83364 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSP010000003.1 423796 422936 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSP010000006.1 10358 12079 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSP010000003.1 283767 283369 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_JBBJSP010000004.1 182529 182092 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSP010000003.1 542814 543356 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSP010000001.1 669949 670899 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSP010000004.1 2837 2364 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSP010000002.1 899498 898995 > SB1 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSS010000003.1 679137 678505 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_JBBJSS010000001.1 531533 530844 9 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_JBBJSS010000001.1 530823 530155 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSS010000003.1 679137 678505 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) NZ_JBBJSS010000004.1 36347 36928 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) NZ_JBBJSS010000004.1 38369 38593 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) NZ_JBBJSS010000004.1 36931 38352 Metabolism of Aromatic Compounds Benzoate degradation benzoate MFS transporter BenK NZ_JBBJSS010000008.1 215956 214736 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSS010000001.1 599759 599322 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_JBBJSS010000004.1 528626 527736 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_JBBJSS010000004.1 527724 525808 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_JBBJSS010000002.1 137127 138344 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_JBBJSS010000009.1 295285 296766 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_JBBJSS010000009.1 290715 295268 9 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) NZ_JBBJSS010000003.1 361034 359454 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_JBBJSS010000001.1 226524 225190 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II NZ_JBBJSS010000003.1 876931 876590 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSS010000011.1 50807 51256 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSS010000003.1 186086 184560 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSS010000003.1 184486 182363 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase like protein NZ_JBBJSS010000008.1 107192 108484 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSS010000003.1 186086 184560 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSS010000002.1 423069 424550 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSS010000004.1 154867 155793 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSS010000001.1 821670 820672 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSS010000001.1 880655 879939 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_JBBJSS010000001.1 633766 633107 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSS010000001.1 669072 668098 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSS010000003.1 184486 182363 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSS010000001.1 879946 878174 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSS010000003.1 285334 283679 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSS010000017.1 44948 45433 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSS010000008.1 231670 232809 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSS010000017.1 44619 44951 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSS010000008.1 59100 58669 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSS010000017.1 45399 46193 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSS010000017.1 42774 43130 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSS010000001.1 232025 231801 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSS010000007.1 180965 180735 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSS010000007.1 314120 315928 Stress Response Bacterial hemoglobins Cyanoglobin NZ_JBBJSS010000004.1 285207 284845 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSS010000003.1 800486 800896 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSS010000003.1 444266 441786 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSS010000003.1 870479 869274 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSS010000004.1 391999 391139 Stress Response Uptake of selenate and selenite Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) NZ_JBBJSS010000004.1 571843 570770 Stress Response Glutathione: Non-redox reactions Lactoylglutathione lyase (EC 4.4.1.5) NZ_JBBJSS010000008.1 44445 44011 Stress Response Glutathionylspermidine and Trypanothione Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2 NZ_JBBJSS010000005.1 530895 529636 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSS010000004.1 412901 413350 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSS010000005.1 41562 40678 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSS010000011.1 2229 1795 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSS010000001.1 526721 526269 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSS010000003.1 171803 171255 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSS010000011.1 50807 51256 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSS010000001.1 639587 638979 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSS010000004.1 413833 413414 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSS010000004.1 557082 556492 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSS010000004.1 557082 556492 36 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSS010000005.1 41562 40678 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSS010000009.1 172386 172862 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSS010000012.1 58006 58833 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSS010000001.1 50565 49042 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSS010000001.1 50565 49042 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) NZ_JBBJSS010000007.1 177203 178687 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSS010000001.1 51527 50565 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSS010000003.1 152474 153994 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) NZ_JBBJSS010000007.1 178709 179911 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSS010000001.1 911631 911137 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSS010000003.1 171803 171255 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSS010000001.1 486265 485294 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSS010000011.1 2954 2484 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_JBBJSS010000004.1 304031 302289 > SB8 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSR010000002.1 143622 144524 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSR010000002.1 143622 144524 6 Metabolism of Aromatic Compounds Quinate degradation Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) NZ_JBBJSR010000006.1 314821 313922 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSR010000006.1 313896 313453 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase I (EC 4.2.1.10) NZ_JBBJSR010000003.1 131017 130253 Metabolism of Aromatic Compounds Benzoate degradation benzoate MFS transporter BenK NZ_JBBJSR010000005.1 206385 205165 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSR010000008.1 1731 2180 Nitrogen Metabolism Nitrate and nitrite ammonification Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) NZ_JBBJSR010000006.1 391111 390794 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase beta chain (EC 1.7.99.4) NZ_JBBJSR010000006.1 85626 87188 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase alpha chain (EC 1.7.99.4) NZ_JBBJSR010000006.1 81974 85636 Nitrogen Metabolism Nitrate and nitrite ammonification Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) NZ_JBBJSR010000006.1 393541 391130 Nitrogen Metabolism Nitrate and nitrite ammonification Nitrite transporter from formate/nitrite family NZ_JBBJSR010000006.1 390772 389930 Nitrogen Metabolism Nitrate and nitrite ammonification Respiratory nitrate reductase gamma chain (EC 1.7.99.4) NZ_JBBJSR010000006.1 87755 88444 11 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_JBBJSR010000001.1 119461 120798 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_JBBJSR010000001.1 443343 447896 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_JBBJSR010000001.1 447913 449403 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_JBBJSR010000001.1 763262 761997 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSR010000005.1 211375 209153 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSR010000004.1 610917 609160 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate regulon transcriptional regulatory protein PhoB (SphR) NZ_JBBJSR010000007.1 24600 23911 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate transport system regulatory protein PhoU NZ_JBBJSR010000006.1 110624 109965 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSR010000004.1 611628 610918 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSR010000005.1 211375 209153 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSR010000005.1 211616 212536 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSR010000005.1 211616 212536 Phosphorus Metabolism Phosphate metabolism Sodium-dependent phosphate transporter NZ_JBBJSR010000004.1 328322 329239 Phosphorus Metabolism Phosphate metabolism Phosphate regulon transcriptional regulatory protein PhoB (SphR) NZ_JBBJSR010000007.1 24600 23911 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_JBBJSR010000006.1 110624 109965 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSR010000004.1 611628 610918 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSR010000004.1 322850 321885 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSR010000004.1 610917 609160 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSR010000005.1 211375 209153 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSR010000002.1 610744 612084 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSR010000001.1 347489 348418 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSR010000002.1 51556 50558 Phosphorus Metabolism Phosphate metabolism Pyrophosphatase PpaX (EC 3.6.1.1) NZ_JBBJSR010000003.1 232577 231924 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSR010000002.1 7770 5551 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) NZ_JBBJSR010000001.1 747885 746668 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) NZ_JBBJSR010000001.1 746684 745905 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) NZ_JBBJSR010000001.1 748512 747904 Secondary Metabolism Auxin biosynthesis Monoamine oxidase (1.4.3.4) NZ_JBBJSR010000001.1 782067 780109 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) NZ_JBBJSR010000001.1 750325 749303 Stress Response Uptake of selenate and selenite Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) NZ_JBBJSR010000005.1 94733 93660 Stress Response Periplasmic Stress Response Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage NZ_JBBJSR010000002.1 767325 768593 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSR010000001.1 114676 114912 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSR010000009.1 140636 141433 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSR010000009.1 138015 138371 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSR010000009.1 138375 138776 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSR010000009.1 139856 140188 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSR010000003.1 393875 392673 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSR010000009.1 140185 140658 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSR010000001.1 436459 435602 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSR010000006.1 416938 418134 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSR010000002.1 219919 219536 Stress Response Bacterial hemoglobins Cyanoglobin NZ_JBBJSR010000001.1 47048 46686 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSR010000005.1 433851 436265 Stress Response Carbon Starvation Starvation sensing protein RspA NZ_JBBJSR010000001.1 863563 864762 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSR010000003.1 311603 311382 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSR010000003.1 771563 769758 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSR010000001.1 892995 892177 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSR010000002.1 523052 521814 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSR010000002.1 520964 520086 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSR010000002.1 521814 520969 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSR010000002.1 389712 391226 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSR010000002.1 585925 586467 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSR010000008.1 1731 2180 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSR010000004.1 179316 178867 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSR010000003.1 40833 40321 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSR010000002.1 394320 394940 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSR010000007.1 205450 205022 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSR010000004.1 159219 158326 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSR010000007.1 204222 204659 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSR010000007.1 1860 1408 35 Stress Response Glutathionylspermidine and Trypanothione Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2 NZ_JBBJSR010000003.1 523624 522395 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSR010000004.1 46958 46482 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSR010000004.1 159219 158326 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSR010000003.1 40833 40321 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSR010000004.1 644700 644200 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSR010000007.1 2659 2195 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSR010000002.1 585925 586467 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSR010000003.1 52028 53026 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_JBBJSR010000006.1 201452 199674 > WA5 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSO010000002.1 417251 417688 Metabolism of Aromatic Compounds Benzoate degradation benzoate MFS transporter BenK NZ_JBBJSO010000001.1 994087 995307 9 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) NZ_JBBJSO010000001.1 2079571 2079347 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) NZ_JBBJSO010000001.1 2081593 2081012 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) NZ_JBBJSO010000001.1 2081009 2079588 Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSO010000001.1 247559 248191 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSO010000001.1 247559 248191 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_JBBJSO010000001.1 1777276 1777938 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_JBBJSO010000001.1 1776618 1777274 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSO010000004.1 52715 53164 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_JBBJSO010000001.1 1472659 1474140 9 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_JBBJSO010000001.1 1468089 1472642 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) NZ_JBBJSO010000001.1 552302 553882 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_JBBJSO010000002.1 790628 791962 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II NZ_JBBJSO010000001.1 31927 32268 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_JBBJSO010000001.1 32306 33706 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_JBBJSO010000001.1 1536896 1538812 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_JBBJSO010000001.1 1535994 1536884 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate transport system regulatory protein PhoU NZ_JBBJSO010000002.1 383446 384105 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSO010000002.1 136591 137307 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate regulon transcriptional regulatory protein PhoB (SphR) NZ_JBBJSO010000002.1 1114753 1115436 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSO010000002.1 137300 139072 Phosphorus Metabolism High affinity phosphate transporter and control of PHO regulon Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSO010000001.1 727758 729881 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSO010000001.1 1959891 1958965 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSO010000001.1 769699 771027 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSO010000001.1 726158 727684 Phosphorus Metabolism Phosphate metabolism Phosphate regulon transcriptional regulatory protein PhoB (SphR) NZ_JBBJSO010000002.1 1114753 1115436 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSO010000002.1 137300 139072 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSO010000001.1 627078 628733 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSO010000001.1 727758 729881 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSO010000002.1 348160 349134 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_JBBJSO010000002.1 383446 384105 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSO010000002.1 136591 137307 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSO010000002.1 195538 196536 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSO010000001.1 726158 727684 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSO010000001.1 727758 729881 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) NZ_JBBJSO010000002.1 558875 559900 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) NZ_JBBJSO010000002.1 561270 562484 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) NZ_JBBJSO010000002.1 562471 563286 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) NZ_JBBJSO010000002.1 560647 561273 Stress Response Uptake of selenate and selenite Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) NZ_JBBJSO010000001.1 1497019 1498092 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSO010000002.1 785116 785340 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSO010000008.1 5376 5044 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSO010000001.1 978375 977233 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSO010000008.1 5047 4562 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSO010000008.1 7221 6865 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSO010000008.1 4596 3802 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSO010000001.1 1147790 1148221 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSO010000003.1 189413 189643 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSO010000003.1 56494 54686 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSO010000001.1 38379 39584 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSO010000001.1 1709326 1710186 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSO010000001.1 440909 442882 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSO010000001.1 108592 108182 Stress Response Bacterial hemoglobins Cyanoglobin NZ_JBBJSO010000001.1 1827118 1827480 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSO010000005.1 79705 78878 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) NZ_JBBJSO010000003.1 191669 190467 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSO010000001.1 759856 758336 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSO010000001.1 260346 259141 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) NZ_JBBJSO010000003.1 193175 191691 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSO010000001.1 259148 258303 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSO010000001.1 261245 260382 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSO010000001.1 2162624 2161740 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSO010000001.1 1507346 1507936 36 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSO010000001.1 1349563 1350039 Stress Response Glutathionylspermidine and Trypanothione Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2 NZ_JBBJSO010000002.1 1684024 1685283 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSO010000002.1 490193 490645 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSO010000004.1 52715 53164 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSO010000001.1 383559 384101 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSO010000002.1 377651 378259 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSO010000001.1 1687489 1687908 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSO010000001.1 1507346 1507936 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSO010000001.1 1688419 1687970 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_JBBJSO010000001.1 2162624 2161740 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSO010000004.1 2307 1873 Stress Response Glutathione: Non-redox reactions Lactoylglutathione lyase (EC 4.4.1.5) NZ_JBBJSO010000001.1 1172405 1172833 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_JBBJSO010000001.1 1800863 1802605 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSO010000002.1 105740 106234 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSO010000004.1 3033 2563 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSO010000001.1 383559 384101 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSO010000001.1 483597 484523 > WB3 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein JBBJSN010000013.1 56147 57052 4 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein JBBJSN010000013.1 56147 57052 Metabolism of Aromatic Compounds Quinate degradation Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) JBBJSN010000014.1 38669 37767 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) JBBJSN010000002.1 277545 277988 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD JBBJSN010000015.1 41622 43538 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ JBBJSN010000015.1 40732 41610 9 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR JBBJSN010000009.1 53486 53917 Nitrogen Metabolism Ammonia assimilation Ammonium transporter JBBJSN010000001.1 308677 309885 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) JBBJSN010000004.1 92489 90909 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) JBBJSN010000032.1 18697 20181 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) JBBJSN010000032.1 14109 18680 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) JBBJSN010000003.1 8601 7267 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II JBBJSN010000001.1 309904 310251 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase JBBJSN010000002.1 201969 202928 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP JBBJSN010000006.1 72099 71371 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter JBBJSN010000023.1 7936 6938 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) JBBJSN010000006.1 71378 69636 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) JBBJSN010000004.1 144583 143177 Phosphorus Metabolism Phosphate metabolism Pyrophosphatase PpaX (EC 3.6.1.1) JBBJSN010000001.1 148851 148201 Phosphorus Metabolism Phosphate metabolism Sodium-dependent phosphate transporter JBBJSN010000002.1 196454 195525 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH JBBJSN010000024.1 28453 29745 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) JBBJSN010000022.1 34516 33590 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) JBBJSN010000005.1 41340 41999 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) JBBJSN010000005.1 41980 43179 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) JBBJSN010000005.1 43176 43979 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) JBBJSN010000005.1 39567 40589 Secondary Metabolism Alkylpyrone synthase Type III polyketide sythase producing alkylpyrones (B. subtilis BpsA) JBBJSN010000034.1 2561 3661 Stress Response Osmoregulation Glycerol uptake facilitator protein JBBJSN010000009.1 65644 64829 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD JBBJSN010000018.1 18715 20247 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, ATP-binding protein OpuBA JBBJSN010000001.1 66959 65811 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) JBBJSN010000021.1 4131 2923 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC JBBJSN010000010.1 57459 56578 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) JBBJSN010000010.1 59583 58315 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, permease protein OpuBB JBBJSN010000001.1 65797 65144 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, permease protein OpuBD JBBJSN010000001.1 64191 63502 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Choline ABC transport system, choline-binding protein OpuBC JBBJSN010000001.1 65130 64213 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB JBBJSN010000010.1 58313 57459 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) JBBJSN010000021.1 5628 4159 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) JBBJSN010000015.1 49826 49005 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator JBBJSN010000023.1 51032 50586 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family JBBJSN010000049.1 2112 1675 Stress Response Oxidative stress Ferric uptake regulation protein FUR JBBJSN010000027.1 33256 32804 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR JBBJSN010000009.1 53486 53917 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein JBBJSN010000029.1 15310 15852 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) JBBJSN010000002.1 234978 235586 Stress Response Oxidative stress Organic hydroperoxide resistance protein JBBJSN010000023.1 50125 50553 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) JBBJSN010000015.1 40064 40642 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) JBBJSN010000015.1 49826 49005 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) JBBJSN010000015.1 40064 40642 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) JBBJSN010000034.1 17530 18012 Stress Response Periplasmic Stress Response Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage JBBJSN010000003.1 115660 114401 Stress Response Hfl operon RNA-binding protein Hfq JBBJSN010000003.1 19374 19153 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT JBBJSN010000011.1 78401 78000 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B JBBJSN010000011.1 78772 78404 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB JBBJSN010000011.1 76142 75354 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) JBBJSN010000011.1 76596 76108 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit JBBJSN010000011.1 77989 76982 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV JBBJSN010000011.1 76922 76593 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) JBBJSN010000023.1 38767 37886 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) JBBJSN010000001.1 83053 81860 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO JBBJSN010000019.1 14688 15086 37 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) JBBJSN010000017.1 51403 53826 Stress Response Carbon Starvation Carbon storage regulator JBBJSN010000001.1 199423 199199 Stress Response Carbon Starvation Carbon starvation protein A JBBJSN010000006.1 45538 43742 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) JBBJSN010000049.1 2738 2271 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein JBBJSN010000029.1 15310 15852 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) JBBJSN010000001.1 135269 134286 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) JBBJSN010000006.1 101557 101057 > WB8 Trait Subsystem Role Genomic Location Start Stop Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway mandelate racemase/muconate lactonizing enzyme family protein NZ_JBBJSM010000018.1 35163 34048 8 8.571428571 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_JBBJSM010000010.1 1931 2629 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_JBBJSM010000010.1 2644 3312 Metabolism of Aromatic Compounds Homogentisate pathway of aromatic compound degradation 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) NZ_JBBJSM010000019.1 10306 9191 Metabolism of Aromatic Compounds Homogentisate pathway of aromatic compound degradation Homogentisate 1,2-dioxygenase (EC 1.13.11.5) NZ_JBBJSM010000019.1 7642 6497 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_JBBJSM010000001.1 400539 401315 Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_JBBJSM010000001.1 400539 401315 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_JBBJSM010000002.1 80994 80539 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSM010000011.1 86299 85865 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_JBBJSM010000001.1 292745 294670 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_JBBJSM010000001.1 291842 292732 3 10 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_JBBJSM010000002.1 122635 121976 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_JBBJSM010000002.1 383595 382876 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_JBBJSM010000002.1 166670 165711 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSM010000008.1 33653 31542 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_JBBJSM010000002.1 382883 381123 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSM010000008.1 35336 33810 Phosphorus Metabolism Phosphate metabolism Sodium-dependent phosphate transporter NZ_JBBJSM010000002.1 133850 132213 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_JBBJSM010000011.1 44368 45366 Phosphorus Metabolism Phosphate metabolism Pyrophosphatase PpaX (EC 3.6.1.1) NZ_JBBJSM010000003.1 15367 14726 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_JBBJSM010000001.1 195258 196658 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_JBBJSM010000004.1 87416 88351 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_JBBJSM010000001.1 781610 780282 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_JBBJSM010000008.1 33653 31542 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_JBBJSM010000008.1 35336 33810 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) NZ_JBBJSM010000001.1 5623 6639 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) NZ_JBBJSM010000001.1 7387 8043 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) NZ_JBBJSM010000001.1 8024 9253 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) NZ_JBBJSM010000001.1 9216 10037 Stress Response Hfl operon HflK protein NZ_JBBJSM010000002.1 380922 379942 Stress Response Hfl operon RNA-binding protein Hfq NZ_JBBJSM010000001.1 527354 527130 Stress Response Hfl operon HflC protein NZ_JBBJSM010000002.1 379952 379017 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_JBBJSM010000015.1 54094 54423 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_JBBJSM010000015.1 54420 54902 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_JBBJSM010000015.1 53023 54030 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_JBBJSM010000015.1 54868 55656 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_JBBJSM010000015.1 52242 52607 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_JBBJSM010000015.1 52610 53011 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_JBBJSM010000007.1 86331 85474 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_JBBJSM010000004.1 50977 49787 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_JBBJSM010000008.1 72840 70444 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_JBBJSM010000004.1 152174 151764 Stress Response Carbon Starvation Carbon starvation protein A NZ_JBBJSM010000006.1 74920 72845 Stress Response Carbon Starvation Carbon storage regulator NZ_JBBJSM010000003.1 76745 76521 Stress Response Periplasmic Stress Response Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage NZ_JBBJSM010000001.1 593384 592122 35.42857143 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_JBBJSM010000001.1 92420 92902 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_JBBJSM010000010.1 10986 11450 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_JBBJSM010000007.1 4048 4497 30 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSM010000008.1 12601 12059 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_JBBJSM010000011.1 86299 85865 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_JBBJSM010000007.1 3930 3517 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_JBBJSM010000002.1 131518 130910 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_JBBJSM010000001.1 284454 285008 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_JBBJSM010000012.1 60463 60900 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_JBBJSM010000001.1 817316 818857 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_JBBJSM010000007.1 74295 72775 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_JBBJSM010000007.1 74295 72775 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_JBBJSM010000007.1 75245 74292 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_JBBJSM010000011.1 63467 64282 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_JBBJSM010000002.1 419775 419275 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_JBBJSM010000008.1 12601 12059 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_JBBJSM010000003.1 5302 4352 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_JBBJSM010000012.1 58772 59245 > Pmega_ATCC Trait Subsystem Role Genomic Location Start Stop Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, permease protein OpuAB NZ_CP035094.1 855349 854504 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) NZ_CP035094.1 5160231 5161433 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC NZ_CP035094.1 857446 856583 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Betaine aldehyde dehydrogenase (EC 1.2.1.8) NZ_CP035094.1 5158725 5160209 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine transporter OpuD NZ_CP035094.1 1382026 1380506 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) NZ_CP035094.1 856547 855342 Stress Response Choline and Betaine Uptake and Betaine Biosynthesis Sarcosine oxidase alpha subunit (EC 1.5.3.1) NZ_CP035095.1 284866 286110 Stress Response Osmoregulation Glycerol uptake facilitator protein NZ_CP035094.1 519030 519857 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_CP035094.1 2854026 2853142 Stress Response Protection from Reactive Oxygen Species Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_CP035094.1 2165124 2165714 Stress Response Oxidative stress Organic hydroperoxide resistance protein NZ_CP035094.1 320882 321301 Stress Response Oxidative stress Superoxide dismutase [Fe] (EC 1.15.1.1) NZ_CP035094.1 2854026 2853142 Stress Response Oxidative stress Nitrite-sensitive transcriptional repressor NsrR NZ_CP035094.1 364002 363553 Stress Response Oxidative stress Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) NZ_CP035094.1 2165124 2165714 Stress Response Oxidative stress Ferric uptake regulation protein FUR NZ_CP035094.1 4436170 4435718 Stress Response Oxidative stress Superoxide dismutase [Mn] (EC 1.15.1.1) NZ_CP035094.1 4596813 4596205 Stress Response Oxidative stress Alkyl hydroperoxide reductase subunit C-like protein NZ_CP035094.1 993683 994225 Stress Response Oxidative stress Organic hydroperoxide resistance transcriptional regulator NZ_CP035094.1 2353783 2353334 Stress Response Oxidative stress Peroxide stress regulator PerR, FUR family NZ_CP035094.1 413003 413437 Stress Response Glutathione: Redox cycle Glutathione peroxidase (EC 1.11.1.9) NZ_CP035094.1 2012219 2012695 Stress Response Glutathionylspermidine and Trypanothione Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 2 NZ_CP035094.1 3190288 3189029 Stress Response Bacterial hemoglobins diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) NZ_CP035094.1 1045669 1047642 Stress Response Bacterial hemoglobins Hemoglobin-like protein HbO NZ_CP035094.1 711559 711149 Stress Response Bacterial hemoglobins Cyanoglobin NZ_CP035094.1 2493741 2494103 Stress Response Carbon Starvation Carbon storage regulator NZ_CP035094.1 5162489 5162259 Stress Response Carbon Starvation Carbon starvation protein A NZ_CP035094.1 5297181 5298989 Stress Response SigmaB stress responce regulation RsbS, negative regulator of sigma-B NZ_CP035094.1 202260 202616 Stress Response SigmaB stress responce regulation Serine-protein kinase RsbW (EC 2.7.11.1) NZ_CP035094.1 204434 204919 Stress Response SigmaB stress responce regulation RNA polymerase sigma factor SigB NZ_CP035094.1 204885 205679 Stress Response SigmaB stress responce regulation Anti-sigma B factor antagonist RsbV NZ_CP035094.1 204105 204437 Stress Response SigmaB stress responce regulation Serine phosphatase RsbU, regulator of sigma subunit NZ_CP035094.1 203035 204045 Stress Response SigmaB stress responce regulation Anti-sigma B factor RsbT NZ_CP035094.1 202620 203021 Stress Response Hfl operon RNA-binding protein Hfq NZ_CP035094.1 4141256 4141032 Stress Response Dimethylarginine metabolism NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) NZ_CP035094.1 2374063 2374923 Stress Response Dimethylarginine metabolism Ornithine aminotransferase (EC 2.6.1.13) NZ_CP035094.1 641593 642798 Stress Response Uptake of selenate and selenite Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) NZ_CP035094.1 2150363 2151436 Nitrogen Metabolism Nitrosative stress Nitrite-sensitive transcriptional repressor NsrR NZ_CP035094.1 364002 363553 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] small chain (EC 1.4.1.13) NZ_CP035094.1 2125986 2127467 Nitrogen Metabolism Ammonia assimilation Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) NZ_CP035094.1 1177409 1178989 Nitrogen Metabolism Ammonia assimilation Glutamate synthase [NADPH] large chain (EC 1.4.1.13) NZ_CP035094.1 2121416 2125969 Nitrogen Metabolism Ammonia assimilation Ammonium transporter NZ_CP035094.1 2756364 2755081 Nitrogen Metabolism Ammonia assimilation Glutamine synthetase type I (EC 6.3.1.2) NZ_CP035094.1 4135743 4134409 Nitrogen Metabolism Ammonia assimilation Nitrogen regulatory protein P-II NZ_CP035094.1 3089429 3089067 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorD NZ_CP035094.1 2194673 2196589 Nitrogen Metabolism Denitrifying reductase gene clusters Nitric oxide reductase activation protein NorQ NZ_CP035094.1 2193771 2194661 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Bcp-type (EC 1.11.1.15) NZ_CP035094.1 412278 412748 Sulfur Metabolism Thioredoxin-disulfide reductase Thiol peroxidase, Tpx-type (EC 1.11.1.15) NZ_CP035094.1 4868768 4868274 Sulfur Metabolism Thioredoxin-disulfide reductase Thioredoxin reductase (EC 1.8.1.9) NZ_CP035094.1 1087983 1088909 Sulfur Metabolism Thioredoxin-disulfide reductase Alkyl hydroperoxide reductase subunit C-like protein NZ_CP035094.1 993683 994225 Sulfur Metabolism Galactosylceramide and Sulfatide metabolism Arylsulfatase (EC 3.1.6.1) NZ_CP035094.1 2468566 2470308 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-) NZ_CP035094.1 2766177 2765596 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) NZ_CP035094.1 2764155 2763931 Metabolism of Aromatic Compounds Hydroxyaromatic decarboxylase family Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) NZ_CP035094.1 2765593 2764172 Metabolism of Aromatic Compounds Benzoate degradation benzoate MFS transporter BenK NZ_CP035094.1 1588150 1589370 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase I (EC 4.2.1.10) NZ_CP035094.1 954526 955311 Metabolism of Aromatic Compounds Quinate degradation Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) NZ_CP035094.1 971932 972828 Metabolism of Aromatic Compounds Quinate degradation 3-dehydroquinate dehydratase II (EC 4.2.1.10) NZ_CP035094.1 3660340 3659864 Metabolism of Aromatic Compounds Gentisate degradation Fumarylacetoacetate hydrolase family protein NZ_CP035094.1 843936 844568 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) NZ_CP035094.1 2443144 2443806 Metabolism of Aromatic Compounds Catechol branch of beta-ketoadipate pathway Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) NZ_CP035094.1 2442486 2443142 Metabolism of Aromatic Compounds Salicylate and gentisate catabolism Fumarylacetoacetate hydrolase family protein NZ_CP035094.1 843936 844568 Phosphorus Metabolism Polyphosphate Exopolyphosphatase (EC 3.6.1.11) NZ_CP035094.1 1348405 1349931 Phosphorus Metabolism Polyphosphate Polyphosphate kinase (EC 2.7.4.1) NZ_CP035094.1 1350005 1352128 Phosphorus Metabolism Phosphate metabolism Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) NZ_CP035094.1 2647412 2646486 Phosphorus Metabolism Phosphate metabolism Predicted ATPase related to phosphate starvation-inducible protein PhoH NZ_CP035094.1 1392094 1393422 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase like protein NZ_CP035094.1 1679927 1678635 Phosphorus Metabolism Phosphate metabolism Phosphate transport system regulatory protein PhoU NZ_CP035094.1 4591022 4590363 Phosphorus Metabolism Phosphate metabolism Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) NZ_CP035094.1 4837214 4835442 Phosphorus Metabolism Phosphate metabolism Exopolyphosphatase (EC 3.6.1.11) NZ_CP035094.1 1348405 1349931 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NZ_CP035094.1 4837923 4837207 Phosphorus Metabolism Phosphate metabolism Alkaline phosphatase (EC 3.1.3.1) NZ_CP035094.1 1252961 1254616 Phosphorus Metabolism Phosphate metabolism Probable low-affinity inorganic phosphate transporter NZ_CP035094.1 4778977 4777979 Phosphorus Metabolism Phosphate metabolism Phosphate starvation-inducible protein PhoH, predicted ATPase NZ_CP035094.1 4626315 4625341 Phosphorus Metabolism Phosphate metabolism Polyphosphate kinase (EC 2.7.4.1) NZ_CP035094.1 1350005 1352128 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase Phosphoenolpyruvate phosphomutase (EC 5.4.2.9) NZ_CP035094.1 773814 775331 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) NZ_CP035094.1 776447 778288 Phosphorus Metabolism Phosphoenolpyruvate phosphomutase Phosphonopyruvate decarboxylase (EC 4.1.1.82) NZ_CP035094.1 775324 776454 Secondary Metabolism Auxin biosynthesis Tryptophan synthase beta chain (EC 4.2.1.20) NZ_CP035094.1 4365092 4363878 Secondary Metabolism Auxin biosynthesis Phosphoribosylanthranilate isomerase (EC 5.3.1.24) NZ_CP035094.1 4365715 4365089 Secondary Metabolism Auxin biosynthesis Anthranilate phosphoribosyltransferase (EC 2.4.2.18) NZ_CP035094.1 4367487 4366462 Secondary Metabolism Auxin biosynthesis Tryptophan synthase alpha chain (EC 4.2.1.20) NZ_CP035094.1 4363891 4363076