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[null,"Functional Type","group","Species","Reference"]
[null,"Phyto+Zooplankton","natural community","not specified","Fasham, M.J.R., Flynn, K.J., Pondaven, P., Anderson, T.R., Boyd, P.W. (2006). Development of a robust ecosystem model to predict the role of iron on biogeochemical cycles: a comparison of results for iron-replete and iron-limited areas, and the SOIREE iron-enrichment experiment. Deep-Sea Research I 53; 333-366. "]
[null,"Phyto+Zooplankton","natural community","not specified","Mitra A, Flynn KJ, Fasham MJR (2007). Accounting correctly for grazing dynamics in Nutrient-Phytoplankton-Zooplankton models. Limnology & Oceanography 52; 649-661"]
[null,"Phytoplankton","chlorophyte","Dunaliella primolecta","Mitra A, Flynn KJ, (2006). Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199; 82-92."]
[null,"Phytoplankton","chlorophyte","Scenedesmus ","Flynn KJ (2001) A mechanistic model for describing dynamic multi-nutrient, light, temperature interactions in phytoplankton. Journal of Plankton Research 23; 977-997."]
[null,"Phytoplankton","chlorophyte","Selenastrum minutum","Flynn KJ (2008) The importance of the form of the quota curve and control of non-limiting nutrient transport in phytoplankton models. Journal of Plankton Research 30; 423–438 DOI: 10.1093/plankt/fbn007"]
[null,"Phytoplankton","chlorophyte","Stichococcus bacillaris","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","cryptophyte","Rhodomonas","Flynn KJ, Clark DR, Mitra A, Fabian H, Hansen PJ, Glibert PM, Wheeler GL, Stoecker DK, Blackford JC, Brownlee C (2015) Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession. Proceedings of the Royal Society B 282: 20142604 http://dx.doi.org/10.1098/rspb.2014.2604"]
[null,"Phytoplankton","cyanobacteria","Synechococcus","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","diatom","Pseudo-nitzschia seriata ","Flynn KJ (2010) Ecological modelling in a sea of variable stoichiometry; dysfunctionality and the legacy of Redfield and Monod. Progress in Oceanography 84; 52-65 DOI: 10.1016/j.pocean.2009.09.006"]
[null,"Phytoplankton","diatom","Skeletonema costatum","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","diatom","Skeletonema costatum","Flynn KJ, Marshall H, Geider RJ (2001) A comparison of two N-irradiance models of phytoplankton growth. Limnology and Oceanography 46; 1794-1802."]
[null,"Phytoplankton","diatom","Thalassiosira pseudonana","Flynn KJ, Berry LS (1999) The loss of organic nitrogen during marine primary production may be overestimated significantly when estimated using 15N substrates. Proceedings of the Royal Society Lond. B 266; 641-647."]
[null,"Phytoplankton","diatom","Thalassiosira pseudonana","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","diatom","Thalassiosira weissflogii","Flynn KJ, Clark DR, Mitra A, Fabian H, Hansen PJ, Glibert PM, Wheeler GL, Stoecker DK, Blackford JC, Brownlee C (2015) Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession. Proceedings of the Royal Society B 282: 20142604 http://dx.doi.org/10.1098/rspb.2014.2604"]
[null,"Phytoplankton","diatom","Thalassiosira weissflogii","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","dinoflagellate","Alexandrium fundyense ","Flynn KJ (2010) Ecological modelling in a sea of variable stoichiometry; dysfunctionality and the legacy of Redfield and Monod. Progress in Oceanography 84; 52-65 DOI: 10.1016/j.pocean.2009.09.006"]
[null,"Phytoplankton","dinoflagellate","Alexandrium fundyense ","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","dinoflagellate","Alexandrium fundyense ","John EH, Flynn KJ (2002) Modelling changes in paralytic shellfish toxin content of dinoflagellates in response to nitrogen and phosphorus supply. Marine Ecology Progress Series 225; 147-160"]
[null,"Phytoplankton","dinoflagellate","Scrippisella troichidea","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","prasinophyte","Mantoniella squamata","Flynn KJ, Berry LS (1999) The loss of organic nitrogen during marine primary production may be overestimated significantly when estimated using 15N substrates. Proceedings of the Royal Society Lond. B 266; 641-647."]
[null,"Phytoplankton","prasinophyte","Micromonas pusila","Mitra A, Flynn KJ, (2006). Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199; 82-92."]
[null,"Phytoplankton","prymnesiophyte","Emiliania huxleyi","Flynn KJ, Clark DR, Mitra A, Fabian H, Hansen PJ, Glibert PM, Wheeler GL, Stoecker DK, Blackford JC, Brownlee C (2015) Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession. Proceedings of the Royal Society B 282: 20142604 http://dx.doi.org/10.1098/rspb.2014.2604"]
[null,"Phytoplankton","prymnesiophyte","Emiliania huxleyi","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","prymnesiophyte","Isochrysis galbana","Mitra A, Flynn KJ, (2006). Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199; 82-92."]
[null,"Phytoplankton","prymnesiophyte","Phaeocystis","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","raphidophyte","Heterosigma akashiwo","Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[null,"Phytoplankton","raphidophyte","Heterosigma carterae","Flynn KJ, Berry LS (1999) The loss of organic nitrogen during marine primary production may be overestimated significantly when estimated using 15N substrates. Proceedings of the Royal Society Lond. B 266; 641-647."]
[null,"Zooplankton + generic phytoplankon","cladocera","Daphnia magna ","Mitra A, Flynn KJ, (2007). Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169; 632-646."]
[null,"Zooplankton + generic phytoplankon","copepod","Acartia clausi ","Mitra A, Flynn KJ, (2007). Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169; 632-646."]
[null,"Zooplankton + generic phytoplankon","copepod","Acartia tonsa ","Mitra A, Flynn KJ, (2007). Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169; 632-646."]
[null,"Zooplankton + generic phytoplankon","copepod","Acartia tonsa ","Mitra A. 2006 A multi-nutrient model for the description of stoichiometric modulation of predation in micro- and mesozooplankton. J. Plankton Res. 28, 597–611. (doi:10.1093/plankt/fbi144)"]
[null,"Zooplankton + generic phytoplankon","copepod","Paracalanus parvus ","Mitra A, Flynn KJ, (2007). Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169; 632-646."]
[null,"Zooplankton + generic phytoplankon","copepod","Paracalanus parvus ","Mitra A. 2006 A multi-nutrient model for the description of stoichiometric modulation of predation in micro- and mesozooplankton. J. Plankton Res. 28, 597–611. (doi:10.1093/plankt/fbi144)"]
[null,"Zooplankton + various phytoplankon","dinoflagellate + chlorophyte+\nprymnesiopphyte+prasinophyte","Oxyrrhis marina + Dunaliella+\nIsochrysis+Micromonas","Mitra A, Flynn KJ, (2006). Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199; 82-92."]
[null,"Zooplankton + generic phytoplankon","dinoflagellate","Oxyrrhis marina","Mitra A. 2006 A multi-nutrient model for the description of stoichiometric modulation of predation in micro- and mesozooplankton. J. Plankton Res. 28, 597–611. (doi:10.1093/plankt/fbi144)"]

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[null,null,"Nutrition",{"$nulls":10},"Interactivity",{"$nulls":5},"Reference"]
[null,null,"Cfix & Chl","N","P","Si","Fe","DOM","Mixotrophy","Cell","Toxin","Temperature\npH",null,"Competition\nSuccession","Predator-prey","HAB","Commercial",null,"Date"]
[null,null,"ü","ü",{"$nulls":7},"ü",null,"ü",{"$nulls":4},2015,"Flynn KJ, Clark DR, Mitra A, Fabian H, Hansen PJ, Glibert PM, Wheeler GL, Stoecker DK, Blackford JC, Brownlee C (2015) Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession. Proceedings of the Royal Society B 282: 20142604 http://dx.doi.org/10.1098/rspb.2014.2604"]
[null,null,"ü","ü","ü",{"$nulls":11},"ü",null,2014,"Kenny P, Flynn KJ (2014) In silico optimization for production of biomass and biofuel feedstocks from microalgae Journal of Applied Phycology DOI 10.1007/s10811-014-0342-2"]
[null,null,"ü","ü",{"$nulls":4},"ü","ü",{"$nulls":3},"ü","ü",{"$nulls":3},2014,"Mitra A, Flynn KJ, Burkholder JM, Berge T, Calbet A, Raven JA, Granéli E, Hansen PJ, Stoecker DK, Thingstad F, Tillmann U, Våge S, Wilken S, Glibert PM, Zubkov MV (2014) The role of mixotrophic protists in the biological carbon pump. Biogeosciences, 11, 1–11 doi: 10.5194/bg-11-995-2014."]
[null,null,"ü",{"$nulls":5},"ü","ü",{"$nulls":3},"ü","ü",{"$nulls":3},2013,"Flynn KJ, Hansen PJ (2013) Cutting the canopy to defeat the “selfish gene”; conflicting selection pressures for the integration of phototrophy in mixotrophic protists. Protist 164; 811-823 doi: 10.1016/j.protis.2013.09.002"]
[null,null,"ü","ü","ü",{"$nulls":8},"ü",null,null,"ü",null,2013,"Flynn KJ, Mitra A, Greenwell HC, Sui J (2013) Monster potential meets potential monster; the pros and cons of deploying genetically modified microalgae for biofuels production. Royal Society Interface Focus doi: 10.1098/rsfs.2012.0037"]
[null,null,"ü","ü",{"$nulls":5},"ü",null,"ü",null,null,"ü",{"$nulls":3},2012,"Flynn KJ, Blackford JC, Baird ME, Raven JA, Clark DR, Beardall J, Brownlee C, Fabian H, Wheeler GL (2012) Changes in pH at the exterior surface of plankton with ocean acidification. Nature Climate Change  2, 510–513 doi: 10.1038/NCLIMATE1489"]
[{"$nulls":3},"ü","ü",{"$nulls":8},"ü",null,"ü",null,null,2010,"Flynn KJ (2010) Do external resource ratios matter? -  implications for modelling eutrophication events and controlling harmful algal blooms. Journal of Marine Systems 83; 170-180 DOI: 10.1016/j.jmarsys.2010.04.007"]
[null,null,"ü","ü",{"$nulls":4},"ü",{"$nulls":5},"ü","ü",null,null,2010,"Mitra A, Flynn KJ (2010) Modelling mixotrophy in harmful algal blooms: More or less the sum of the parts? Journal of Marine Systems 83; 158-169 DOI: 10.1016/j.jmarsys.2010.04.006"]
[null,null,"ü","ü","ü",{"$nulls":8},"ü",null,null,"ü",null,2010,"Flynn KJ, Greenwell HC, Lovitt RW, Shields RJ (2010) Selection for fitness at the individual or population levels: modeling effects of genetic modifications in microalgae on productivity and environmental safety. Journal of Theoretical Biology 263; 269-280 DOI: 10.1016/j.jtbi.2009.12.021"]
[null,null,"ü","ü",{"$nulls":9},"ü",{"$nulls":4},2009,"Flynn KJ, (2009) Going for the slow burn: why should possession of a low maximum growth rate be advantageous for microalgae? Plant Ecology & Diversity 2; 179-189 DOI: 10.1080/17550870903207268"]
[null,null,"ü","ü","ü",{"$nulls":3},"ü","ü",{"$nulls":4},"ü",{"$nulls":3},2009,"Flynn KJ, Mitra A (2009) Building the “perfect beast”: modelling mixotrophic plankton. Journal of Plankton Research 31; 965-992 DOI: 10.1093/plankt/fbp044"]
[null,null,"ü","ü",{"$nulls":5},"ü","ü",null,null,"ü","ü","ü",null,null,2009,"Flynn KJ, Irigoien X (2009) Why aldehyde-induced insidious effects cannot be considered as a diatom defence mechanism against copepods. Marine Ecology Progress Series 377, 79–89 DOI: 10.3354/meps07865"]
[null,null,"ü","ü",{"$nulls":10},"ü",{"$nulls":3},2009,"Flynn KJ (2009) Food-density dependent inefficiency in animals with a gut as a stabilising mechanism in trophic dynamics. Proceedings of the Royal Society Lond. B 276, 1147–1152 DOI: 10.1098/rspb.2008.1575"]
[null,null,"ü","ü",{"$nulls":6},"ü",null,null,"ü","ü","ü",null,null,2008,"Flynn KJ (2008) Attack is not the best form of defense; lessons from harmful algal bloom dynamics. Harmful Algae 8; 129-139 DOI: 10.1016/j.hal.2008.08.007"]
[null,null,"ü","ü","ü","ü",{"$nulls":3},"ü",{"$nulls":8},2008,"Flynn KJ (2008) Use, abuse, misconceptions and insights from quota models: the Droop cell-quota model 40 years on. Oceanography & Marine Biology: An Annual Review 46; 1-23. ISSN: 0078-3218"]
[null,null,"ü","ü",{"$nulls":3},"ü",{"$nulls":10},2008,"Flynn KJ, Clark DR, Xue Y (2008) Modelling the release of dissolved organic matter by phytoplankton. J.Phycol. 44; 1171-1187 DOI: 10.1111/j.1529-8817.2008.00562.x"]
[{"$nulls":3},"ü","ü",{"$nulls":9},"ü","ü",null,null,2007,"Mitra A, Flynn KJ, (2007). Importance of interactions between food quality, quantity, and gut transit time on consumer feeding, growth, and trophic dynamics. American Naturalist 169; 632-646."]
[null,null,"ü","ü",{"$nulls":10},"ü",{"$nulls":3},2007,"Mitra A, Flynn KJ, Fasham MJR (2007). Accounting correctly for grazing dynamics in Nutrient-Phytoplankton-Zooplankton models. Limnology & Oceanography 52; 649-661"]
[{"$nulls":14},"ü",{"$nulls":3},2006,"Mitra A, Flynn KJ, (2006). Accounting for variation in prey selectivity by zooplankton. Ecological Modelling 199; 82-92."]
[null,null,"ü","ü",null,"ü","ü",{"$nulls":11},2006,"Fasham, M.J.R., Flynn, K.J., Pondaven, P., Anderson, T.R., Boyd, P.W. (2006). Development of a robust ecosystem model to predict the role of iron on biogeochemical cycles: a comparison of results for iron-replete and iron-limited areas, and the SOIREE iron-enrichment experiment. Deep-Sea Research I 53; 333-366. "]
[{"$nulls":3},"ü",{"$nulls":6},"ü",null,null,"ü","ü","ü",null,null,2006,"Mitra A, Flynn KJ (2006) Promotion of harmful algal blooms by zooplankton predatory activity. Biology Letters 2; 194-197"]
[null,null,"ü","ü","ü","ü","ü",{"$nulls":9},"ü",null,2006,"Flynn KJ (2006) Mechanistic Models of Algal Physiology. In Algal Cultures, Analogues of blooms and Applications, ed. DV Subba Rao, Science Publishers, Enfield USA, pp501-532"]
[{"$nulls":3},"ü","ü","ü",{"$nulls":7},"ü",{"$nulls":4},2005,"Flynn KJ (2005) Modelling marine phytoplankton growth under eutrophic conditions. Journal of Sea Research 54; 92-103."]
[{"$nulls":3},"ü",{"$nulls":14},2003,"Stephens N, Flynn KJ, Gallon JR (2003) Interrelationships between the pathways of inorganic nitrogen assimilation in the cyanobacterium Gloeothece can be described using a mechanistic mathematical model. New Phytologist 160; 545-555."]
[null,null,"ü",{"$nulls":15},2003,"Flynn KJ (2003) Do we need complex mechanistic photoacclimation models for phytoplankton? Limnology & Oceanography 48; 2243-2249."]
[null,null,"ü",{"$nulls":15},2003,"Flynn KJ, Fasham MJR (2003) Operation of light-dark cycles within simple ecosystem models of primary production and the consequences of using phytoplankton models with different abilities to assimilate N in darkness.  Journal of Plankton Research 25; 83-92."]
[{"$nulls":3},"ü","ü",{"$nulls":8},"ü",{"$nulls":4},2002,"Flynn KJ (2002) How critical is the critical N:P ratio? Journal of Phycology 38; 961-970."]
[null,null,"ü","ü","ü",{"$nulls":5},"ü",{"$nulls":4},"ü",null,null,2002,"Flynn KJ (2002) Toxin production in migrating dinoflagellates; a modelling study of PSP producing Alexandrium.  Harmful Algae 1; 147-155."]
[null,null,"ü","ü","ü",{"$nulls":10},"ü",null,null,2002,"Flynn KJ, Fasham MJR (2002) A modelling exploration of vertical migration by phytoplankton. Journal of Theoretical Biology 218; 471-484."]
[null,null,"ü","ü",{"$nulls":9},"ü",{"$nulls":4},2002,"Flynn KJ, Clark DR, Owens NJP (2002) Modelling suggests that optimization of dark nitrogen-assimilation need not be a critical selective feature in phytoplankton. New Phytologist 155; 109-119."]
[null,null,"ü","ü","ü",{"$nulls":5},"ü",{"$nulls":4},"ü",null,null,2002,"John EH, Flynn KJ (2002) Modelling changes in paralytic shellfish toxin content of dinoflagellates in response to nitrogen and phosphorus supply. Marine Ecology Progress Series 225; 147-160."]
[null,null,"ü","ü","ü","ü","ü",null,null,"ü",null,"ü",{"$nulls":6},2001,"Flynn KJ (2001) A mechanistic model for describing dynamic multi-nutrient, light, temperature interactions in phytoplankton. Journal of Plankton Research 23; 977-997."]
[null,null,"ü",{"$nulls":15},2001,"Flynn KJ, Marshall H, Geider RJ (2001) A comparison of two N-irradiance models of phytoplankton growth. Limnology and Oceanography 46; 1794-1802."]
[{"$nulls":3},"ü",null,"ü",{"$nulls":3},"ü",{"$nulls":3},"ü",{"$nulls":4},2000,"Flynn KJ, Martin-Jézéquel V (2000) Modelling Si-N limited growth of diatoms. Journal of Plankton Research 22; 447-472."]
[{"$nulls":4},"ü",{"$nulls":8},"ü",{"$nulls":4},2000,"John EH, Flynn KJ (2000) Modelling phosphate transport and assimilation in microalgae; how much complexity is warranted? Ecological Modelling 125; 145-157."]
[null,null,"ü","ü",null,null,"ü",{"$nulls":11},1999,"Flynn KJ, Hipkin CR (1999) Interactions between iron, light, ammonium and nitrate; insights from the construction of a dynamic model of algal physiology. Journal of Phycology 35; 1171-1190."]
[{"$nulls":3},"ü",{"$nulls":7},"ü",{"$nulls":6},1999,"Flynn KJ (1999) Nitrate transport and ammonium-nitrate interactions at high nitrate concentration and low temperature. Marine Ecology Progress Series 187; 283-287."]
[{"$nulls":3},"ü",{"$nulls":3},"ü",{"$nulls":10},1999,"Flynn KJ, Berry LS (1999) The loss of organic nitrogen during marine primary production may be overestimated significantly when estimated using 15N substrates. Proceedings of the Royal Society Lond. B 266; 641-647."]
[{"$nulls":3},"ü",{"$nulls":14},1998,"Flynn KJ (1998) Estimation of kinetic parameters for the transport of nitrate and ammonium into marine phytoplankton. Marine Ecology Progress Series 169; 13-28."]
[{"$nulls":3},"ü",{"$nulls":14},1998,"Flynn KJ, Flynn K. (1998) The release of nitrite by marine dinoflagellates - development of a mathematical simulation. Marine Biology 130; 455-470."]
[{"$nulls":3},"ü",{"$nulls":14},1997,"Flynn KJ, Fasham MJR (1997) A short version of the ammonium-nitrate interaction model. Journal of Plankton Research 19; 1881-1897."]
[{"$nulls":3},"ü",{"$nulls":14},1997,"Flynn KJ, Fasham MJR, Hipkin CR (1997) Modelling the interaction between ammonium and nitrate uptake in marine phytoplankton. Philosophical Transactions of the Royal Society 352; 1625-1645."]