NCBI Blast:gb|KC477229|

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Search Parameters
Search parameter name	Search parameter value
Program	blastn
Word size	28
Expect value	10
Hitlist size	100
Match/Mismatch scores	1,-2
Gapcosts	0,2.5
Low Complexity Filter	Yes
Filter string	L;m;
Genetic Code	1

Database
Database parameter name	Database parameter value
Posted date	Oct 3, 2019 5:47 AM
Number of letters	253,942,268,922
Number of sequences	56,496,701
Entrez query	Includes: Excludes: None

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	1.33271	1.28
K	0.620991	0.46
H	1.12409	0.85

Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	35
Effective length of query	520
Effective length of database	251964884387
Effective search space	131021739881240
Effective search space used	131021739881240

Job Title

gb|KC477229| ...

RID

UUVPVA0V015 Search expires on 10-22 16:39 pm

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Results for

Program

BLASTN

Citation
Reference
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14.
Reference - database indexing
Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala, Alejandro A. Schäffer (2008), "Database Indexing for Production MegaBLAST Searches", Bioinformatics 24:1757-1764.

Database

See details

Query ID

KC477229.1

Description

Hypoxylon fragiforme strain MUCL 51264 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence ...

Molecule type

nucleic acid

Query Length

555

Other reports

Distance tree of results

Filter Results

Descriptions

select all
100 sequences selected

, Reading indexes 1-5, displaying indexes 1-5

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Max Score	Total Score	Query Cover	E value	Per. Ident	Accession
1Select seq KC477229.1	Hypoxylon fragiforme strain MUCL 51264 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1026	1026	100%	0.0	100.00%	KC477229.1
2Select seq MH855287.1	Hypoxylon fragiforme strain CBS 204.32 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	MH855287.1
3Select seq MH855188.1	Hypoxylon fragiforme strain CBS 206.31 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	MH855188.1
4Select seq MG098276.1	Hypoxylon fragiforme strain NW-FVA2331 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	MG098276.1
5Select seq KU684022.1	Hypoxylon fragiforme isolate CBS 206.31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	KU684022.1
6Select seq KT695333.1	Hypoxylon fragiforme voucher BIOUG24047-A11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	KT695333.1
7Select seq JN979419.1	Hypoxylon fragiforme 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	JN979419.1
8Select seq EF155528.1	Hypoxylon fragiforme isolate Z31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155528.1
9Select seq EF155523.1	Hypoxylon fragiforme isolate BO390 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155523.1
10Select seq EF155519.1	Hypoxylon fragiforme isolate BO293 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155519.1
11Select seq EF155518.1	Hypoxylon fragiforme isolate BO166 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155518.1
12Select seq EF155517.1	Hypoxylon fragiforme isolate BO132 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155517.1
13Select seq EF155515.1	Hypoxylon fragiforme isolate BI38 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155515.1
14Select seq EF155508.1	Hypoxylon fragiforme isolate BI9 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155508.1
15Select seq EF155507.1	Hypoxylon fragiforme isolate BF546 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	1009	100%	0.0	99.46%	EF155507.1
16Select seq AJ390402.1	Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS 1 and 2, isolate H13C	1007	1007	99%	0.0	99.46%	AJ390402.1
17Select seq MH860609.1	Hypoxylon fragiforme strain CBS 801.72 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1003	1003	100%	0.0	99.28%	MH860609.1
18Select seq KX869947.1	Hypoxylon fragiforme isolate ARSL_071114.22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1003	1003	100%	0.0	99.28%	KX869947.1
19Select seq LC015715.1	Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: MOTU1	1003	1003	100%	0.0	99.28%	LC015715.1
20Select seq EF155529.1	Hypoxylon fragiforme isolate Z36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	1003	100%	0.0	99.28%	EF155529.1
21Select seq EF155511.1	Hypoxylon fragiforme isolate BI25 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	1003	99%	0.0	99.46%	EF155511.1
22Select seq EF155509.1	Hypoxylon fragiforme isolate BI11 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	1003	100%	0.0	99.28%	EF155509.1
23Select seq KJ468769.1	Hypoxylon fragiforme strain EXF-5882 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	1002	1002	99%	0.0	99.46%	KJ468769.1
24Select seq FN539046.1	Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 5.8S rRNA gene (partial), ITS1 and ITS2, isolate st59	1002	1002	100%	0.0	99.28%	FN539046.1
25Select seq EF155524.1	Hypoxylon fragiforme isolate BO439 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1002	1002	100%	0.0	99.28%	EF155524.1
26Select seq EF155513.1	Hypoxylon fragiforme isolate BI36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1002	1002	100%	0.0	99.28%	EF155513.1
27Select seq AJ390401.1	Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS 1 and 2, isolate H12C	1002	1002	99%	0.0	99.28%	AJ390401.1
28Select seq FN435711.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR124	998	998	98%	0.0	99.45%	FN435711.1
29Select seq KM044079.1	Hypoxylon fragiforme isolate 9_1_1_2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	992	98%	0.0	99.27%	KM044079.1
30Select seq EF155521.1	Hypoxylon fragiforme isolate BO352 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	992	100%	0.0	98.92%	EF155521.1
31Select seq EF155516.1	Hypoxylon fragiforme isolate BO51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	992	99%	0.0	99.27%	EF155516.1
32Select seq EF155530.1	Hypoxylon fragiforme isolate Z38 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	989	989	100%	0.0	98.92%	EF155530.1
33Select seq EF155514.1	Hypoxylon fragiforme isolate BI37 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	989	989	98%	0.0	99.45%	EF155514.1
34Select seq FN435821.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR224	983	983	97%	0.0	99.45%	FN435821.1
35Select seq FN435782.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR263	979	979	97%	0.0	99.44%	FN435782.1
36Select seq FN435682.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR080	977	977	97%	0.0	99.26%	FN435682.1
37Select seq FN435637.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR019	976	976	97%	0.0	99.26%	FN435637.1
38Select seq EF155512.1	Hypoxylon fragiforme isolate BI31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	976	976	97%	0.0	99.26%	EF155512.1
39Select seq FN435781.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR259	974	974	97%	0.0	99.26%	FN435781.1
40Select seq FN435772.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR243	974	974	97%	0.0	99.26%	FN435772.1
41Select seq KX618654.1	Hypoxylon fragiforme voucher KC2-023D4 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	970	970	96%	0.0	99.26%	KX618654.1
42Select seq FN435833.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR273	968	968	97%	0.0	99.07%	FN435833.1
43Select seq FN435630.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR007	965	965	98%	0.0	98.54%	FN435630.1
44Select seq FN435835.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR280	959	959	96%	0.0	98.88%	FN435835.1
45Select seq AY616689.1	Hypoxylon fragiforme isolate agrD466 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	959	959	95%	0.0	99.25%	AY616689.1
46Select seq FN435643.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR026	955	955	97%	0.0	98.70%	FN435643.1
47Select seq AY616690.1	Hypoxylon fragiforme isolate agrD459 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	955	955	95%	0.0	99.25%	AY616690.1
48Select seq FN435834.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR278	953	953	95%	0.0	99.06%	FN435834.1
49Select seq EU686087.1	Fungal endophyte sp. ECD-2008 isolate 183 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence	950	950	94%	0.0	99.24%	EU686087.1
50Select seq MH935038.1	Hypoxylon fragiforme isolate N1_T11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	948	948	94%	0.0	99.43%	MH935038.1
51Select seq MG021164.1	Hypoxylon fragiforme strain 21big cmik hzi small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	948	948	100%	0.0	97.19%	MG021164.1
52Select seq AF201709.1	Hypoxylon fragiforme 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	948	948	100%	0.0	97.19%	AF201709.1
53Select seq FN435709.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR121	941	941	98%	0.0	97.33%	FN435709.1
54Select seq FN435683.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR083	941	941	95%	0.0	98.50%	FN435683.1
55Select seq FN435793.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR276	941	941	95%	0.0	98.68%	FN435793.1
56Select seq FN435823.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR247	937	937	97%	0.0	98.15%	FN435823.1
57Select seq FN435770.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR236	937	937	98%	0.0	97.80%	FN435770.1
58Select seq FN435765.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR220	937	937	95%	0.0	98.68%	FN435765.1
59Select seq FN435750.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR187	937	937	96%	0.0	97.96%	FN435750.1
60Select seq AY618235.1	Hypoxylon fragiforme internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	928	928	92%	0.0	99.41%	AY618235.1
61Select seq FN435771.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR237	926	926	94%	0.0	98.48%	FN435771.1
62Select seq FN435638.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR020	922	922	92%	0.0	99.22%	FN435638.1
63Select seq FN435797.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR283	915	915	96%	0.0	97.59%	FN435797.1
64Select seq FN435768.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR234	915	915	96%	0.0	97.59%	FN435768.1
65Select seq EF155520.1	Hypoxylon fragiforme isolate BO337 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	915	915	91%	0.0	99.21%	EF155520.1
66Select seq LC015719.1	Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: MOTU27	902	902	99%	0.0	95.65%	LC015719.1
67Select seq FN435640.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR022	896	896	89%	0.0	99.20%	FN435640.1
68Select seq FN435660.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR046	887	887	98%	0.0	95.86%	FN435660.1
69Select seq HE774495.1	Hypoxylon howeanum genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain ZLVG 337, isolate JDG 23	883	883	100%	0.0	95.50%	HE774495.1
70Select seq MH425287.1	Hypoxylon howeanum voucher Hao & Guo & Han 060302 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	881	881	99%	0.0	95.50%	MH425287.1
71Select seq EF155527.1	Hypoxylon fragiforme isolate Z12 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	881	881	87%	0.0	99.38%	EF155527.1
72Select seq MH859700.1	Hypoxylon howeanum strain CBS 334.70 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	880	880	100%	0.0	95.34%	MH859700.1
73Select seq AM749928.1	Hypoxylon howeanum 5.8S rRNA gene, ITS1 and ITS2, strain MUCL 47599	880	880	99%	0.0	95.49%	AM749928.1
74Select seq MH791288.1	Hypoxylon fragiforme isolate 20PWS2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	876	876	87%	0.0	99.38%	MH791288.1
75Select seq FN435671.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR061	876	876	96%	0.0	95.96%	FN435671.1
76Select seq FN435710.1	Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR122	872	872	98%	0.0	95.45%	FN435710.1
77Select seq MK907737.1	Hypoxylon howeanum isolate Z136 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	869	869	99%	0.0	95.13%	MK907737.1
78Select seq FJ820835.1	Uncultured fungus clone S348 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	869	869	100%	0.0	94.97%	FJ820835.1
79Select seq FN435665.1	Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR052	869	869	98%	0.0	95.28%	FN435665.1
80Select seq FN435804.1	Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR127	867	867	98%	0.0	95.27%	FN435804.1
81Select seq MG712337.1	Hypoxylon fragiforme voucher 420526MF0324 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	859	859	99%	0.0	94.78%	MG712337.1
82Select seq FN435751.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR188	857	857	97%	0.0	95.23%	FN435751.1
83Select seq JQ009323.1	Hypoxylon howeanum voucher YMJ 388 (HAST) 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	856	856	100%	0.0	94.36%	JQ009323.1
84Select seq FN435633.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR013	850	850	93%	0.0	96.35%	FN435633.1
85Select seq FM200459.1	Fungal endophyte sp. AP074 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and partial ITS2, isolate AP074	843	843	84%	0.0	99.15%	FM200459.1
86Select seq AY974309.1	Fungal sp. VLam1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	808	808	79%	0.0	99.55%	AY974309.1
87Select seq FR668001.1	Hypoxylon howeanum genomic DNA containing ITS1, 5.8S rRNA gene and ITS2, isolate 4379	806	806	90%	0.0	95.63%	FR668001.1
88Select seq FN435769.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR235	802	802	96%	0.0	93.91%	FN435769.1
89Select seq EF155510.1	Hypoxylon fragiforme isolate BI24A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	795	795	84%	0.0	97.22%	EF155510.1
90Select seq FN435822.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR246	782	782	95%	0.0	93.33%	FN435822.1
91Select seq MH178719.1	Hypoxylon sp. isolate IUB:B.Whitaker:OTU50 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	771	771	96%	0.0	92.59%	MH178719.1
92Select seq FN435705.1	Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR114	723	723	87%	0.0	93.66%	FN435705.1
93Select seq LC015721.1	Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU52	678	678	74%	0.0	96.38%	LC015721.1
94Select seq FN435826.1	Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR250	678	678	75%	0.0	95.94%	FN435826.1
95Select seq LC015722.1	Uncultured Annulohypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU56	623	623	71%	3e-174	95.02%	LC015722.1
96Select seq LC015724.1	Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU72	597	597	61%	2e-166	98.25%	LC015724.1
97Select seq JN906615.1	Uncultured fungus clone MOTU_517_GOKCVWY06HFYGI 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence	497	497	49%	2e-136	99.63%	JN906615.1
98Select seq MK714964.1	Hypoxylon sp. isolate SW330 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	464	464	69%	2e-126	88.89%	MK714964.1
99Select seq MG457825.1	Hypoxylon fuscum isolate H.F-1006-L-102 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	442	442	71%	8e-120	87.34%	MG457825.1
100Select seq KC968938.1	Hypoxylon fraxinophilum culture-collection MUCL:54176 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	442	442	72%	8e-120	86.75%	KC968938.1

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- Alignment Scores
- < 40
- 40 - 50
- 50 - 80
- 80 - 200
- >= 200
- Help
  The graphic is an overview of the database sequences aligned to the query sequence. These are represented horizontal bars colored coded by score and showing the extent of the alignment on the query sequence. Separate aligned regions on the same database sequence are connected by a thin grey line. Mousing over an alignment shows the database sequence title. Clicking an alignment displays a box with more details about the alignment and link to the sequence alignment itself in the Alignments section of the report.
- 100 sequences selected
- Help
Distribution of the top 100 Blast Hits on 100 subject sequences

Query

1
100
200
300
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500

Alignments

100 sequences selected
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Sequence ID: KC477229.1Length: 555Number of Matches: 1

Range 1: 1 to 555GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1026 bits(555)	0.0()	555/555(100%)	0/555(0%)	Plus/Plus

Query  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60

Query  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120

Query  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180

Query  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240

Query  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300

Query  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360

Query  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420

Query  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480

Query  481  CACAGTCTTTTTGTCTCGCTTTGGATATTCCCCGCCTCCACGCCGTAAAACCCCCCATAT  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  CACAGTCTTTTTGTCTCGCTTTGGATATTCCCCGCCTCCACGCCGTAAAACCCCCCATAT  540

Query  541  CAAATGTTGACCTCG  555
            |||||||||||||||
Sbjct  541  CAAATGTTGACCTCG  555

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Hypoxylon fragiforme strain CBS 204.32 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

Sequence ID: MH855287.1Length: 626Number of Matches: 1

Range 1: 34 to 588GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1009 bits(546)	0.0()	553/556(99%)	2/556(0%)	Plus/Plus

Query  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  34   TCATTAGAGGAATACCCAAAACCTCCCAACCCCT-GTGAACTTACCACTGTTTCCTCGGC  92

Query  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  93   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  152

Query  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  212

Query  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  272

Query  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  273  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  332

Query  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  333  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  392

Query  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  452

Query  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  453  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  512

Query  481  CACAGTCTTTTTGTCTCGCTTTGGATATT-CCCCGCCTCCACGCCGTAAAACCCCCCATA  539
            |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  513  CACAATCTTTTTGTCTCGCTTTGGATATTGCCCCGCCTCCACGCCGTAAAACCCCCCATA  572

Query  540  TCAAATGTTGACCTCG  555
            ||||||||||||||||
Sbjct  573  TCAAATGTTGACCTCG  588

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Hypoxylon fragiforme strain CBS 206.31 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

Sequence ID: MH855188.1Length: 626Number of Matches: 1

Range 1: 34 to 588GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1009 bits(546)	0.0()	553/556(99%)	2/556(0%)	Plus/Plus

Query  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  34   TCATTAGAGGAATACCCAAAACCTCCCAACCCCT-GTGAACTTACCACTGTTTCCTCGGC  92

Query  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  93   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  152

Query  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  212

Query  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  272

Query  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  273  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  332

Query  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  333  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  392

Query  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  452

Query  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  453  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  512

Query  481  CACAGTCTTTTTGTCTCGCTTTGGATATT-CCCCGCCTCCACGCCGTAAAACCCCCCATA  539
            |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  513  CACAATCTTTTTGTCTCGCTTTGGATATTGCCCCGCCTCCACGCCGTAAAACCCCCCATA  572

Query  540  TCAAATGTTGACCTCG  555
            ||||||||||||||||
Sbjct  573  TCAAATGTTGACCTCG  588

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Hypoxylon fragiforme strain NW-FVA2331 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

Sequence ID: MG098276.1Length: 648Number of Matches: 1

Range 1: 54 to 608GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1009 bits(546)	0.0()	553/556(99%)	2/556(0%)	Plus/Plus

Query  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  54   TCATTAGAGGAATACCCAAAACCTCCCAACCCCT-GTGAACTTACCACTGTTTCCTCGGC  112

Query  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  113  GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  172

Query  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  173  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  232

Query  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  233  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  292

Query  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  293  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  352

Query  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  353  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  412

Query  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  413  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  472

Query  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  473  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  532

Query  481  CACAGTCTTTTTGTCTCGCTTTGGATATT-CCCCGCCTCCACGCCGTAAAACCCCCCATA  539
            |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  533  CACAATCTTTTTGTCTCGCTTTGGATATTGCCCCGCCTCCACGCCGTAAAACCCCCCATA  592

Query  540  TCAAATGTTGACCTCG  555
            ||||||||||||||||
Sbjct  593  TCAAATGTTGACCTCG  608

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Hypoxylon fragiforme isolate CBS 206.31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

Sequence ID: KU684022.1Length: 1135Number of Matches: 1

Range 1: 3 to 557GenBank Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Identities	Gaps	Strand	Frame
1009 bits(546)	0.0()	553/556(99%)	2/556(0%)	Plus/Plus

Query  1    TCATTAGAGGAATACCCAAAACCTCCCAACCCCTAGTGAACTTACCACTGTTTCCTCGGC  60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  3    TCATTAGAGGAATACCCAAAACCTCCCAACCCCT-GTGAACTTACCACTGTTTCCTCGGC  61

Query  61   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  62   GTGCGCACCTGGTTGCCCGCGGGGGATCCGAGCCTACCCTGTAGCTACCCTGTAGCTACC  121

Query  121  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  122  CTGTAGACCCGGGTCCTCAGCACACGGCGCCGCTCAAGGTCCCGCCGAAGTACCCTGAAC  181

Query  181  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  182  TCTGTTTAACGTGGAATTCTGAATGCTTCAACTAAATAAGTTAAAACTTTCAACAACGGA  241

Query  241  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  242  TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA  301

Query  301  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  302  GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGC  361

Query  361  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  362  ATGCCTATTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGCGTTGGGAGTCTAC  421

Query  421  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  422  GGGTTACCCTGTAGTTCCTGAAAACCATTGGCGGAGTCAGGGAGCACTCTAAGCGTATTA  481

Query  481  CACAGTCTTTTTGTCTCGCTTTGGATATT-CCCCGCCTCCACGCCGTAAAACCCCCCATA  539
            |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  482  CACAATCTTTTTGTCTCGCTTTGGATATTGCCCCGCCTCCACGCCGTAAAACCCCCCATA  541

Query  540  TCAAATGTTGACCTCG  555
            ||||||||||||||||
Sbjct  542  TCAAATGTTGACCTCG  557

Taxonomy

100 sequences selected
Help

Lineage

Lineage Report
Organism	Blast Name	Score	Number of Hits	Description
Fungi	fungi		107
.Xylariales	ascomycetes		102
..Hypoxylaceae	ascomycetes		97
...Hypoxylon	ascomycetes		96
....Hypoxylon fragiforme	ascomycetes	1026	81	Hypoxylon fragiforme hits
....Hypoxylon howeanum	ascomycetes	883	11	Hypoxylon howeanum hits
....Hypoxylon sp.	ascomycetes	771	2	Hypoxylon sp. hits
....Hypoxylon fuscum	ascomycetes	442	1	Hypoxylon fuscum hits
....Hypoxylon fraxinophilum	ascomycetes	442	1	Hypoxylon fraxinophilum hits
...Annulohypoxylon truncatum	ascomycetes	1002	1	Annulohypoxylon truncatum hits
..uncultured Hypoxylon	ascomycetes	1003	4	uncultured Hypoxylon hits
..uncultured Annulohypoxylon	ascomycetes	623	1	uncultured Annulohypoxylon hits
.fungal endophyte sp. ECD-2008	fungi	950	1	fungal endophyte sp. ECD-2008 hits
.uncultured fungus	fungi	869	2	uncultured fungus hits
.fungal endophyte sp. AP074	fungi	843	1	fungal endophyte sp. AP074 hits
.fungal sp. VLam1	fungi	808	1	fungal sp. VLam1 hits

Organism

Organism Report
Description	Score	E value	Accession
Hypoxylon fragiforme [ascomycetes] Next Previous First
Hypoxylon fragiforme strain MUCL 51264 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1026	0.0	KC477229
Hypoxylon fragiforme strain CBS 204.32 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	0.0	MH855287
Hypoxylon fragiforme strain CBS 206.31 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	0.0	MH855188
Hypoxylon fragiforme strain NW-FVA2331 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1009	0.0	MG098276
Hypoxylon fragiforme isolate CBS 206.31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	KU684022
Hypoxylon fragiforme voucher BIOUG24047-A11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	KT695333
Hypoxylon fragiforme 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	JN979419
Hypoxylon fragiforme 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	JN979420
Hypoxylon fragiforme isolate MUCL51264 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	KM186294
Hypoxylon fragiforme isolate Z31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155528
Hypoxylon fragiforme isolate BO390 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155523
Hypoxylon fragiforme isolate BO412 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155525
Hypoxylon fragiforme isolate Z8 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155526
Hypoxylon fragiforme isolate BO293 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155519
Hypoxylon fragiforme isolate BO166 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155518
Hypoxylon fragiforme isolate BO380 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155522
Hypoxylon fragiforme isolate BO132 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155517
Hypoxylon fragiforme isolate BI38 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155515
Hypoxylon fragiforme isolate BI9 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155508
Hypoxylon fragiforme isolate BF546 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1009	0.0	EF155507
Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS 1 and 2, isolate H13C	1007	0.0	AJ390402
Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS 1 and 2, isolate H14M	1007	0.0	AJ390403
Hypoxylon fragiforme strain CBS 801.72 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1003	0.0	MH860609
Hypoxylon fragiforme isolate ARSL_071114.22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	1003	0.0	KX869947
Hypoxylon fragiforme isolate Z36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	0.0	EF155529
Hypoxylon fragiforme isolate BI25 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	0.0	EF155511
Hypoxylon fragiforme isolate BI11 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1003	0.0	EF155509
Hypoxylon fragiforme strain EXF-5882 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	1002	0.0	KJ468769
Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 5.8S rRNA gene (partial), ITS1 and ITS2, isolate st59	1002	0.0	FN539046
Hypoxylon fragiforme isolate BO439 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1002	0.0	EF155524
Hypoxylon fragiforme isolate BI36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	1002	0.0	EF155513
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR124	998	0.0	FN435711
Hypoxylon fragiforme isolate 9_1_1_2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	0.0	KM044079
Hypoxylon fragiforme isolate BO352 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	0.0	EF155521
Hypoxylon fragiforme isolate BO51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	992	0.0	EF155516
Hypoxylon fragiforme isolate Z38 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	989	0.0	EF155530
Hypoxylon fragiforme isolate BI37 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	989	0.0	EF155514
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR224	983	0.0	FN435821
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR263	979	0.0	FN435782
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR252	979	0.0	FN435828
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR080	977	0.0	FN435682
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR019	976	0.0	FN435637
Hypoxylon fragiforme isolate BI31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	976	0.0	EF155512
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR259	974	0.0	FN435781
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR243	974	0.0	FN435772
Hypoxylon fragiforme voucher KC2-023D4 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	970	0.0	KX618654
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR273	968	0.0	FN435833
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR007	965	0.0	FN435630
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR280	959	0.0	FN435835
Hypoxylon fragiforme isolate agrD466 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	959	0.0	AY616689
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR026	955	0.0	FN435643
Hypoxylon fragiforme isolate agrD459 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	955	0.0	AY616690
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR278	953	0.0	FN435834
Hypoxylon fragiforme isolate N1_T11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	948	0.0	MH935038
Hypoxylon fragiforme strain 21big cmik hzi small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	948	0.0	MG021164
Hypoxylon fragiforme 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	948	0.0	AF201709
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR121	941	0.0	FN435709
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR083	941	0.0	FN435683
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR276	941	0.0	FN435793
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR247	937	0.0	FN435823
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR236	937	0.0	FN435770
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR220	937	0.0	FN435765
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR187	937	0.0	FN435750
Hypoxylon fragiforme internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	928	0.0	AY618235
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR237	926	0.0	FN435771
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR020	922	0.0	FN435638
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR283	915	0.0	FN435797
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR234	915	0.0	FN435768
Hypoxylon fragiforme isolate BO337 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	915	0.0	EF155520
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR022	896	0.0	FN435640
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR046	887	0.0	FN435660
Hypoxylon fragiforme isolate Z12 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	881	0.0	EF155527
Hypoxylon fragiforme isolate 20PWS2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	876	0.0	MH791288
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR061	876	0.0	FN435671
Hypoxylon fragiforme voucher 420526MF0324 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	859	0.0	MG712337
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR188	857	0.0	FN435751
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR013	850	0.0	FN435633
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR235	802	0.0	FN435769
Hypoxylon fragiforme isolate BI24A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	795	0.0	EF155510
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR246	782	0.0	FN435822
Hypoxylon fragiforme genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR114	723	0.0	FN435705
uncultured Hypoxylon [ascomycetes] Next Previous First
Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: MOTU1	1003	0.0	LC015715
Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: MOTU27	902	0.0	LC015719
Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU52	678	0.0	LC015721
Uncultured Hypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU72	597	2e-166	LC015724
Annulohypoxylon truncatum [ascomycetes] Next Previous First
Hypoxylon fragiforme 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS 1 and 2, isolate H12C	1002	0.0	AJ390401
fungal endophyte sp. ECD-2008 [fungi] Next Previous First
Fungal endophyte sp. ECD-2008 isolate 183 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence	950	0.0	EU686087
Hypoxylon howeanum [ascomycetes] Next Previous First
Hypoxylon howeanum genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain ZLVG 337, isolate JDG 23	883	0.0	HE774495
Hypoxylon howeanum voucher Hao & Guo & Han 060302 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	881	0.0	MH425287
Hypoxylon howeanum strain CBS 334.70 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	880	0.0	MH859700
Hypoxylon howeanum 5.8S rRNA gene, ITS1 and ITS2, strain MUCL 47599	880	0.0	AM749928
Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR122	872	0.0	FN435710
Hypoxylon howeanum isolate Z136 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	869	0.0	MK907737
Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR052	869	0.0	FN435665
Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR127	867	0.0	FN435804
Hypoxylon howeanum voucher YMJ 388 (HAST) 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	856	0.0	JQ009323
Hypoxylon howeanum genomic DNA containing ITS1, 5.8S rRNA gene and ITS2, isolate 4379	806	0.0	FR668001
Hypoxylon howeanum genomic DNA sequence containing ITS1, 5.8S rRNA gene and ITS2, strain agrAR250	678	0.0	FN435826
uncultured fungus [fungi] Next Previous First
Uncultured fungus clone S348 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	869	0.0	FJ820835
Uncultured fungus clone MOTU_517_GOKCVWY06HFYGI 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence	497	2e-136	JN906615
fungal endophyte sp. AP074 [fungi] Next Previous First
Fungal endophyte sp. AP074 partial 18S rRNA gene, ITS1, 5.8S rRNA gene and partial ITS2, isolate AP074	843	0.0	FM200459
fungal sp. VLam1 [fungi] Next Previous First
Fungal sp. VLam1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	808	0.0	AY974309
Hypoxylon sp. [ascomycetes] Next Previous First
Hypoxylon sp. isolate IUB:B.Whitaker:OTU50 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	771	0.0	MH178719
Hypoxylon sp. isolate SW330 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence	464	2e-126	MK714964
uncultured Annulohypoxylon [ascomycetes] Next Previous First
Uncultured Annulohypoxylon genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, note: SMOTU56	623	3e-174	LC015722
Hypoxylon fuscum [ascomycetes] Next Previous First
Hypoxylon fuscum isolate H.F-1006-L-102 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence	442	8e-120	MG457825
Hypoxylon fraxinophilum [ascomycetes] Next Previous First
Hypoxylon fraxinophilum culture-collection MUCL:54176 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence	442	8e-120	KC968938

Taxonomy

Taxonomy Report
Taxonomy	Number of hits	Number of Organisms	Description
Fungi	107	12
. Xylariales	102	8
.. Hypoxylaceae	97	6
... Hypoxylon	96	5
.... Hypoxylon fragiforme	81	1	Hypoxylon fragiforme hits
.... Hypoxylon howeanum	11	1	Hypoxylon howeanum hits
.... Hypoxylon sp.	2	1	Hypoxylon sp. hits
.... Hypoxylon fuscum	1	1	Hypoxylon fuscum hits
.... Hypoxylon fraxinophilum	1	1	Hypoxylon fraxinophilum hits
... Annulohypoxylon truncatum	1	1	Annulohypoxylon truncatum hits
.. uncultured Hypoxylon	4	1	uncultured Hypoxylon hits
.. uncultured Annulohypoxylon	1	1	uncultured Annulohypoxylon hits
. unclassified Fungi	3	3
.. fungal endophyte sp. ECD-2008	1	1	fungal endophyte sp. ECD-2008 hits
.. fungal endophyte sp. AP074	1	1	fungal endophyte sp. AP074 hits
.. fungal sp. VLam1	1	1	fungal sp. VLam1 hits
. uncultured fungus	2	1	uncultured fungus hits

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Sequences producing significant alignments