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["gene","desc","isHousekeeper","median.logFC","nsdiff.pVal","nsdiff.pValAdj","nsdiff.sigStatus","relapse.upReg","relapse.downReg","relapse.upReg.perc","relapse.downReg.perc","rawCounts.percentile","rawCounts.sum"]
["S100A8","S100 calcium binding protein A8","no",1.513,0,0.004,"qvalue <= 0.05",11,3,78.57,21.43,"81%",17298]
["FN1","fibronectin 1","no",1.395,0.003,0.032,"qvalue <= 0.05",11,3,78.57,21.43,"94%",43579]
["IL8",null,"no",1.3439999999999999,0.005,0.037,"qvalue <= 0.05",10,4,71.43,28.57,"45%",3944]
["IL6","interleukin 6","no",1.204,0,0,"qvalue <= 0.05",11,3,78.57,21.43,"37%",2997]
["S100A9","S100 calcium binding protein A9","no",1.027,0.006,0.048,"qvalue <= 0.05",11,3,78.57,21.43,"91%",30673]
["GPR183","G protein-coupled receptor 183","no",0.719,0.003,0.025,"qvalue <= 0.05",11,3,78.57,21.43,"56%",6153]
["NFIL3","nuclear factor, interleukin 3 regulated","no",0.586,0.001,0.014,"qvalue <= 0.05",11,3,78.57,21.43,"38%",3059]
["IL1RL1","interleukin 1 receptor like 1","no",0.452,0.004,0.035,"qvalue <= 0.05",8,6,57.14,42.86,"15%",542]
["AHR","aryl hydrocarbon receptor","no",0.439,0.004,0.034,"qvalue <= 0.05",12,2,85.71,14.29,"83%",18936]
["CR2","complement C3d receptor 2","no",0.379,0,0,"qvalue <= 0.05",10,4,71.43,28.57,"51%",4843]
["PAX5","paired box 5","no",0.331,0,0,"qvalue <= 0.05",9,5,64.29,35.71,"54%",5917]
["SYK","spleen associated tyrosine kinase","no",0.303,0.001,0.009,"qvalue <= 0.05",11,3,78.57,21.43,"61%",7633]
["PPARG","peroxisome proliferator activated receptor gamma","no",0.147,0,0,"qvalue <= 0.05",8,6,57.14,42.86,"17%",683]
["IL12A","interleukin 12A","no",0.139,0.002,0.024,"qvalue <= 0.05",8,6,57.14,42.86,"10%",310]
["DPP4","dipeptidyl peptidase 4","no",0.136,0.006,0.047,"qvalue <= 0.05",8,6,57.14,42.86,"31%",2043]
["C9","complement C9","no",0.109,0.002,0.022,"qvalue <= 0.05",7,7,50,50,"1%",118]
["RAG1","recombination activating 1","no",0.06,0,0,"qvalue <= 0.05",8,6,57.14,42.86,"16%",624]
["MS4A1","membrane spanning 4-domains A1","no",0.036,0,0,"qvalue <= 0.05",7,7,50,50,"84%",20276]
["CCL7","C-C motif chemokine ligand 7","no",-0.045,0.002,0.021,"qvalue <= 0.05",7,7,50,50,"3%",130]
["HAVCR2","hepatitis A virus cellular receptor 2","no",-0.058,0,0,"qvalue <= 0.05",7,7,50,50,"44%",3735]
["RAG2","recombination activating 2","no",-0.08,0,0,"qvalue <= 0.05",6,8,42.86,57.14,"11%",334]
["KIR_Activating_Subgroup_2",null,"no",-0.108,0.001,0.013,"qvalue <= 0.05",5,9,35.71,64.29,"6%",187]
["KLRC4","killer cell lectin like receptor C4","no",-0.131,0,0,"qvalue <= 0.05",6,8,42.86,57.14,"20%",952]
["NCR1","natural cytotoxicity triggering receptor 1","no",-0.134,0,0,"qvalue <= 0.05",6,8,42.86,57.14,"15%",575]
["TRAF3","TNF receptor associated factor 3","no",-0.148,0.002,0.024,"qvalue <= 0.05",2,12,14.29,85.71,"63%",7930]
["IL17A","interleukin 17A","no",-0.174,0,0,"qvalue <= 0.05",7,7,50,50,"10%",310]
["CD80","CD80 molecule","no",-0.228,0.003,0.029,"qvalue <= 0.05",3,11,21.43,78.57,"39%",3188]
["IFNB1","interferon beta 1","no",-0.252,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"4%",146]
["IFNG","interferon gamma","no",-0.284,0,0,"qvalue <= 0.05",6,8,42.86,57.14,"30%",1918]
["IKBKE","inhibitor of nuclear factor kappa B kinase subunit epsilon","no",-0.291,0.006,0.045,"qvalue <= 0.05",5,9,35.71,64.29,"74%",12563]
["MBP","myelin basic protein","no",-0.304,0.004,0.032,"qvalue <= 0.05",4,10,28.57,71.43,"49%",4511]
["IL2RB","interleukin 2 receptor subunit beta","no",-0.329,0.001,0.013,"qvalue <= 0.05",5,9,35.71,64.29,"79%",15178]
["CCND3","cyclin D3","no",-0.33,0.001,0.01,"qvalue <= 0.05",3,11,21.43,78.57,"64%",8144]
["C8G","complement C8 gamma chain","no",-0.336,0.006,0.045,"qvalue <= 0.05",5,9,35.71,64.29,"12%",359]
["SELPLG","selectin P ligand","no",-0.343,0.002,0.018,"qvalue <= 0.05",4,10,28.57,71.43,"27%",1538]
["TNFSF8","TNF superfamily member 8","no",-0.362,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"24%",1271]
["IL6R","interleukin 6 receptor","no",-0.38,0.002,0.018,"qvalue <= 0.05",3,11,21.43,78.57,"51%",5048]
["XCR1","X-C motif chemokine receptor 1","no",-0.391,0.002,0.017,"qvalue <= 0.05",4,10,28.57,71.43,"25%",1343]
["TNF","tumor necrosis factor","no",-0.41,0.003,0.029,"qvalue <= 0.05",5,9,35.71,64.29,"40%",3266]
["CASP8","caspase 8","no",-0.413,0.001,0.013,"qvalue <= 0.05",4,10,28.57,71.43,"79%",14813]
["CD3EAP","CD3e molecule associated protein","no",-0.446,0.004,0.036,"qvalue <= 0.05",4,10,28.57,71.43,"20%",908]
["FYN","FYN proto-oncogene, Src family tyrosine kinase","no",-0.48,0,0.006,"qvalue <= 0.05",3,11,21.43,78.57,"82%",18205]
["C8A","complement C8 alpha chain","no",-0.5,0.002,0.018,"qvalue <= 0.05",5,9,35.71,64.29,"4%",148]
["IRF3","interferon regulatory factor 3","no",-0.525,0.004,0.036,"qvalue <= 0.05",5,9,35.71,64.29,"24%",1219]
["CRADD","CASP2 and RIPK1 domain containing adaptor with death domain","no",-0.54,0.004,0.033,"qvalue <= 0.05",3,11,21.43,78.57,"26%",1410]
["FADD","Fas associated via death domain","no",-0.576,0,0,"qvalue <= 0.05",3,11,21.43,78.57,"21%",956]
["DEFB1","defensin beta 1","no",-0.584,0.001,0.008,"qvalue <= 0.05",4,10,28.57,71.43,"4%",149]
["ITLN1","intelectin 1","no",-0.605,0.001,0.017,"qvalue <= 0.05",6,8,42.86,57.14,"7%",205]
["ITGAL","integrin subunit alpha L","no",-0.611,0,0,"qvalue <= 0.05",3,11,21.43,78.57,"88%",24524]
["CEACAM8","carcinoembryonic antigen related cell adhesion molecule 8","no",-0.616,0,0.001,"qvalue <= 0.05",4,10,28.57,71.43,"4%",151]
["IL12RB1","interleukin 12 receptor subunit beta 1","no",-0.621,0.001,0.012,"qvalue <= 0.05",5,9,35.71,64.29,"48%",4467]
["C5","complement C5","no",-0.632,0,0.001,"qvalue <= 0.05",3,11,21.43,78.57,"17%",688]
["IFNA2","interferon alpha 2","no",-0.663,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"5%",169]
["CD247","CD247 molecule","no",-0.672,0.001,0.013,"qvalue <= 0.05",4,10,28.57,71.43,"62%",7895]
["MAF","MAF bZIP transcription factor","no",-0.675,0.005,0.037,"qvalue <= 0.05",4,10,28.57,71.43,"28%",1702]
["EOMES","eomesodermin","no",-0.686,0,0.004,"qvalue <= 0.05",4,10,28.57,71.43,"16%",644]
["FCAR","Fc fragment of IgA receptor","no",-0.718,0,0.003,"qvalue <= 0.05",2,12,14.29,85.71,"2%",126]
["PDCD1","programmed cell death 1","no",-0.722,0,0.004,"qvalue <= 0.05",4,10,28.57,71.43,"19%",884]
["IL17F","interleukin 17F","no",-0.738,0,0,"qvalue <= 0.05",5,9,35.71,64.29,"26%",1391]
["IL21","interleukin 21","no",-0.758,0,0,"qvalue <= 0.05",3,11,21.43,78.57,"33%",2409]
["IL28A",null,"no",-0.76,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"8%",256]
["FOXP3","forkhead box P3","no",-0.764,0,0,"qvalue <= 0.05",1,13,7.14,92.86,"25%",1328]
["TNFRSF13B","TNF receptor superfamily member 13B","no",-0.775,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"22%",1132]
["ATM","ATM serine/threonine kinase","no",-0.78,0.005,0.037,"qvalue <= 0.05",5,9,35.71,64.29,"18%",797]
["CD3E","CD3e molecule","no",-0.81,0.003,0.025,"qvalue <= 0.05",3,11,21.43,78.57,"78%",14659]
["IL27","interleukin 27","no",-0.837,0.004,0.036,"qvalue <= 0.05",3,11,21.43,78.57,"11%",326]
["KIR3DL3","killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 3","no",-0.837,0,0.004,"qvalue <= 0.05",4,10,28.57,71.43,"1%",100]
["CD27","CD27 molecule","no",-0.841,0,0,"qvalue <= 0.05",2,12,14.29,85.71,"68%",9895]
["CXCR3","C-X-C motif chemokine receptor 3","no",-0.86,0,0,"qvalue <= 0.05",1,13,7.14,92.86,"37%",2921]
["CD6","CD6 molecule","no",-0.892,0.001,0.014,"qvalue <= 0.05",4,10,28.57,71.43,"69%",10094]
["ITLN2","intelectin 2","no",-0.95,0,0,"qvalue <= 0.05",3,11,21.43,78.57,"3%",141]
["CD40LG","CD40 ligand","no",-1.008,0,0.006,"qvalue <= 0.05",3,11,21.43,78.57,"31%",2108]
["TCF7","transcription factor 7","no",-1.015,0,0.004,"qvalue <= 0.05",4,10,28.57,71.43,"85%",21042]
["CD7","CD7 molecule","no",-1.05,0,0.003,"qvalue <= 0.05",2,12,14.29,85.71,"65%",8676]
["CD160","CD160 molecule","no",-1.063,0,0.003,"qvalue <= 0.05",2,12,14.29,85.71,"16%",655]
["CCR10","C-C motif chemokine receptor 10","no",-1.125,0.001,0.01,"qvalue <= 0.05",4,10,28.57,71.43,"10%",317]
["CASP10","caspase 10","no",-1.179,0.004,0.036,"qvalue <= 0.05",5,9,35.71,64.29,"9%",284]
["DEFB103A","defensin beta 103A","no",-1.37,0,0,"qvalue <= 0.05",4,10,28.57,71.43,"5%",162]
["Supplementary table 1C (differentially expressed genes): gene: gene name, desc: description of gene, isHouskeeper: use of gene as housekeeper, median.logFC: median logFC per gene over all pairs of biopsies, nsdiff.pVal: (unadjusted) P-value of differential expression by analysis with NanoStringDiff, nsdiff.pValAdj: adjusted P-value (q value), nsdiff.sigStatus: p-valued categories as indicated as ≤ 0.05 of >0.05., relapse.upReg: number of pairs of biopsies (patients) with gene up-regulated at relapse , relapse.downReg: number of pairs of biopsies (patients) with gene down-regulated at relapse, relapse.upReg.perc: percentage of pairs/patients of \"relapse.upReg\", relapse.downReg.perc: percentage of pairs/patients of \"relapse.downReg\", rawCounts.percentile: percentile of \"rawCounts.sum\" (high value, reflects high overall expression), rawCounts.sum:  sum of raw counts per gene over all samples."]