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[]
[]
[{"$nulls":6},"Supplementary Data 3: Alternative splicing analysis at the level of individual splicing events and per category of event. "]
["Tables presenting the results of the rMATS analysis (one table per category of event). Categories are as follow: SE = skipped exons, MXE = mutually exclusive exons, RI = retained intron, A5SS = alternative 5’ splicing site and A3SS = alternative 3’ splicing site. For each type of event, the first three columns (A-C) indicate the two types of samples compared (S1 and S2) and are followed by the gene identifiers (Ensembl Gene ID and Gene symbol). The next four columns (F-I) provide the mean inclusion level in the first (S1) and in the second (S2) type of samples, their ratio and FDR (False Discovery Rate). They are followed by columns providing information about the event itself (genomic locations in hg19). Samples are as follow: C = control shRNA – no drug, Ccis = control shRNA + Cisplatin, D = RNF113A shRNA – no drug, Dcis = RNF113A shRNA + Cisplatin."]