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["Supplementary Data 3a Differentially expressed genes between colon and ileum (linear regression, two-sided t-test, FDR < 0.001, |beta| > 1.5)"]
["beta >0, up regulated in ileum; beta <0, up regulated in colon"]
["Beta","SE","WaldTest P","Probe","FDR"]
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[2.219219,0.2099679,{"v":3.598572e-22,"d":"3.60E-22"},"ENSG00000174992",{"v":1.56686686931e-21,"d":"1.57E-21"}]
[1.642926,0.1572763,{"v":9.164554e-22,"d":"9.16E-22"},"ENSG00000118200",{"v":3.93141981436e-21,"d":"3.93E-21"}]
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[1.889753,0.1829244,{"v":2.18933e-21,"d":"2.19E-21"},"ENSG00000172410",{"v":9.25370977503e-21,"d":"9.25E-21"}]
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[2.790521,0.2846499,{"v":1.112536e-19,"d":"1.11E-19"},"ENSG00000203859",{"v":4.38035335653e-19,"d":"4.38E-19"}]
[1.51631,0.1546821,{"v":1.117382e-19,"d":"1.12E-19"},"ENSG00000163993",{"v":4.39822853238e-19,"d":"4.40E-19"}]
[1.565788,0.1604094,{"v":1.516535e-19,"d":"1.52E-19"},"ENSG00000254609",{"v":5.93119933469e-19,"d":"5.93E-19"}]
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[1.523123,0.1669323,{"v":1.513509e-17,"d":"1.51E-17"},"ENSG00000214814",{"v":5.43094865984e-17,"d":"5.43E-17"}]
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[1.688797,0.1970001,{"v":7.14809e-16,"d":"7.15E-16"},"ENSG00000159212",{"v":2.36074213166e-15,"d":"2.36E-15"}]
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[1.806649,0.2216509,{"v":1.243387e-14,"d":"1.24E-14"},"ENSG00000205364",{"v":3.84616406995e-14,"d":"3.85E-14"}]
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[1.670861,0.2516791,{"v":1.653632e-10,"d":"1.65E-10"},"ENSG00000214049",{"v":4.00600922569e-10,"d":"4.01E-10"}]
[-1.586659,0.2890089,{"v":9.062699e-08,"d":"9.06E-08"},"ENSG00000229807",{"v":1.81367547657e-07,"d":"1.81E-07"}]

{"sheet":"Supplementary Data 3.b","index":1,"n_rows":45,"n_cols":3,"rows_kept":45,"flags":["formulas_cached_only"]}
["Supplementary Data 3b, REACTOME top annotations for genes differentially expressed between colon and ileum (P values were obtained from two-sided Wilcoxon test)"]
["Up-regulated genes in colon"]
["gene_set_id","gene_set_name","p-value"]
["REACTOME:R-HSA-381753","Olfactory Signaling Pathway",{"v":4.40475057365643e-40,"d":"4.40E-40"}]
["REACTOME:R-HSA-68886","M Phase",{"v":7.60684704514669e-35,"d":"7.61E-35"}]
["REACTOME:R-HSA-3214847","HATs acetylate histones",{"v":1.04746361969863e-34,"d":"1.05E-34"}]
["REACTOME:R-HSA-1640170","Cell Cycle",{"v":3.0919343071169e-32,"d":"3.09E-32"}]
["REACTOME:R-HSA-4839726","Chromatin organization",{"v":1.95166735247075e-31,"d":"1.95E-31"}]
["REACTOME:R-HSA-3247509","Chromatin modifying enzymes",{"v":1.95166735247075e-31,"d":"1.95E-31"}]
["REACTOME:R-HSA-69278","Cell Cycle  Mitotic",{"v":2.47174797574765e-30,"d":"2.47E-30"}]
["REACTOME:R-HSA-5696398","Nucleotide Excision Repair",{"v":2.95589478533263e-30,"d":"2.96E-30"}]
["REACTOME:R-HSA-72203","Processing of Capped Intron-Containing Pre-mRNA",{"v":5.04390762811116e-30,"d":"5.04E-30"}]
["REACTOME:R-HSA-2672351","Stimuli-sensing channels",{"v":8.38717193963535e-30,"d":"8.39E-30"}]
["REACTOME:R-HSA-6807505","RNA polymerase II transcribes snRNA genes",{"v":1.76416988253588e-28,"d":"1.76E-28"}]
["REACTOME:R-HSA-382551","Transport of small molecules",{"v":4.40302655317735e-27,"d":"4.40E-27"}]
["REACTOME:R-HSA-72172","mRNA Splicing",{"v":4.25663701601842e-26,"d":"4.26E-26"}]
["REACTOME:R-HSA-5689880","Ub-specific processing proteases",{"v":6.60679877789744e-26,"d":"6.61E-26"}]
["REACTOME:R-HSA-5688426","Deubiquitination",{"v":2.97498084876885e-25,"d":"2.97E-25"}]
["REACTOME:R-HSA-212436","Generic Transcription Pathway",{"v":3.63338605557736e-25,"d":"3.63E-25"}]
["REACTOME:R-HSA-3108232","SUMO E3 ligases SUMOylate target proteins",{"v":3.645104830012e-25,"d":"3.65E-25"}]
["REACTOME:R-HSA-2990846","SUMOylation",{"v":1.5579546398276e-24,"d":"1.56E-24"}]
["REACTOME:R-HSA-72163","mRNA Splicing - Major Pathway",{"v":4.74799601770982e-24,"d":"4.75E-24"}]
["REACTOME:R-HSA-5362517","Signaling by Retinoic Acid",{"v":8.43952003297444e-24,"d":"8.44E-24"}]
["Up-regulated genes in ileum"]
["gene_set_id","gene_set_name","p-value"]
["REACTOME:R-HSA-6806667","Metabolism of fat-soluble vitamins",{"v":7.12525810377064e-71,"d":"7.13E-71"}]
["REACTOME:R-HSA-196854","Metabolism of vitamins and cofactors",{"v":1.04033337619239e-70,"d":"1.04E-70"}]
["REACTOME:R-HSA-425407","SLC-mediated transmembrane transport",{"v":1.09190706642608e-63,"d":"1.09E-63"}]
["REACTOME:R-HSA-211859","Biological oxidations",{"v":1.87076580687912e-63,"d":"1.87E-63"}]
["REACTOME:R-HSA-382551","Transport of small molecules",{"v":1.73886747802648e-62,"d":"1.74E-62"}]
["REACTOME:R-HSA-2187338","Visual phototransduction",{"v":3.63870058036259e-59,"d":"3.64E-59"}]
["REACTOME:R-HSA-5619102","SLC transporter disorders",{"v":2.72253958342948e-58,"d":"2.72E-58"}]
["REACTOME:R-HSA-189200","Cellular hexose transport",{"v":1.98625472427686e-56,"d":"1.99E-56"}]
["REACTOME:R-HSA-211945","Phase I - Functionalization of compounds",{"v":2.80388800145641e-49,"d":"2.80E-49"}]
["REACTOME:R-HSA-5423646","Aflatoxin activation and detoxification",{"v":1.44782492440991e-48,"d":"1.45E-48"}]
["REACTOME:R-HSA-2142753","Arachidonic acid metabolism",{"v":4.15200587239585e-47,"d":"4.15E-47"}]
["REACTOME:R-HSA-156580","Phase II - Conjugation of compounds",{"v":1.19280479801272e-46,"d":"1.19E-46"}]
["REACTOME:R-HSA-174824","Plasma lipoprotein assembly",{"v":4.32702941586775e-44,"d":"4.33E-44"}]
["REACTOME:R-HSA-212436","Generic Transcription Pathway",{"v":2.59175523654528e-43,"d":"2.59E-43"}]
["REACTOME:R-HSA-381753","Olfactory Signaling Pathway",{"v":9.15002121977486e-43,"d":"9.15E-43"}]
["REACTOME:R-HSA-556833","Metabolism of lipids",{"v":7.76527965150347e-42,"d":"7.77E-42"}]
["REACTOME:R-HSA-352230","Amino acid transport across the plasma membrane",{"v":8.93984749172349e-41,"d":"8.94E-41"}]
["REACTOME:R-HSA-425393","Transport of inorganic cations/anions and amino acids/oligopeptides",{"v":9.36828655916883e-39,"d":"9.37E-39"}]
["REACTOME:R-HSA-1430728","Metabolism",{"v":9.79079487830926e-39,"d":"9.79E-39"}]
["REACTOME:R-HSA-5663084","Diseases of carbohydrate metabolism",{"v":6.39326328247559e-38,"d":"6.39E-38"}]