PeakID (cmd=annotatePeaks.pl mergeGS404-GS430_IP_BG4_m1_F2L0_peaks.txt hg38) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type Merged-chrM-3551-2 chrM 3387 3715 0 1304.199951 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_137295) TTS (NR_137295) 1880 NR_137295 Merged-chrM-15723-2 chrM 15618 15828 0 1093.449951 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 14052 NR_137295 Merged-chrM-16398-2 chrM 16295 16502 0 1060.349976 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 14727 NR_137295 Merged-chrM-12578-2 chrM 12459 12697 0 1056.050049 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 10907 NR_137295 Merged-chrM-11353-2 chrM 11246 11460 0 1029.099976 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 9682 NR_137295 Merged-chrM-2776-2 chrM 2675 2877 0 977.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_137295, exon 1 of 1) non-coding (NR_137295, exon 1 of 1) 1105 NR_137295 Merged-chrM-595-1 chrM 495 695 0 951.900024 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_137294) promoter-TSS (NR_137294) -53 NR_137294 Merged-chrM-13914-2 chrM 13790 14038 0 890.349976 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 12243 NR_137295 Merged-chrM-9879-2 chrM 9773 9985 0 890.199951 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 8208 NR_137295 Merged-chrM-2342-2 chrM 2237 2448 0 567.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_137294) TTS (NR_137294) 671 NR_137295 Merged-chrM-14380-1 chrM 14280 14480 0 476.399994 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 12709 NR_137295 Merged-chrM-1725-2 chrM 1623 1828 0 454.549988 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_137295) promoter-TSS (NR_137295) 54 NR_137295 Merged-chrM-8166-2 chrM 8066 8267 0 239.199997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 6495 NR_137295 Merged-chrM-1392-1 chrM 1292 1492 0 229.800003 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_137295) promoter-TSS (NR_137295) -279 NR_137295 Merged-chrM-5470-2 chrM 5370 5571 0 150.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 3799 NR_137295 Merged-chrM-4935-2 chrM 4832 5038 0 143.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 3264 NR_137295 Merged-chr12-95217649-2 chr12 95217509 95217790 0 139.199997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_018351) promoter-TSS (NM_018351) -97 NR_038241 55591 Hs.24135 NM_017599 ENSG00000028203 VEZT VEZATIN vezatin, adherens junctions transmembrane protein protein-coding Merged-chr12-68686816-2 chr12 68686694 68686939 0 128.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_038930) promoter-TSS (NR_038930) 43 NR_038930 100507250 Hs.600731 NR_038930 ENSG00000247363 LOC100507250 -0 uncharacterized LOC100507250 ncRNA Merged-chr12-74537779-2 chr12 74537677 74537882 0 126.800003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001136262) promoter-TSS (NM_001136262) 8 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding Merged-chr12-57752466-2 chr12 57752341 57752591 0 116.550003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_000075) promoter-TSS (NM_000075) -19 NM_000075 1019 Hs.95577 NM_000075 ENSG00000135446 CDK4 CMM3|PSK-J3 cyclin dependent kinase 4 protein-coding Merged-chr12-95103359-2 chr12 95103255 95103464 0 105.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 14 of 20) intron (NM_018351, intron 14 of 20) -29731 NM_001032287 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding Merged-chr21-26140313-2 chr21 26140206 26140420 0 103.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001136016) promoter-TSS (NM_001136016) 77 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chrM-6368-2 chrM 6266 6470 0 102.550003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 4697 NR_137295 Merged-chr12-68808063-2 chr12 68807963 68808164 0 101.449997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001278462) promoter-TSS (NM_001278462) -109 NM_001145339 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding Merged-chr12-68899354-1 chr12 68899254 68899454 0 100.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001005502, intron 2 of 8) MamGypsy2-I|LTR|Gypsy 33845 NM_001005502 1368 Hs.654387 NM_001874 ENSG00000135678 CPM -0 carboxypeptidase M protein-coding Merged-chrM-8699-1 chrM 8599 8799 0 99.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 7028 NR_137295 Merged-chr12-68830414-1 chr12 68830314 68830514 0 96.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145339, intron 6 of 8) intron (NM_001145339, intron 6 of 8) 21397 NM_001278462 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding Merged-chr12-60148237-1 chr12 60148137 60148337 0 93.699997 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 458900 NR_073056 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding Merged-chr15-98442638-1 chr15 98442538 98442738 0 92.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182562, intron 5 of 6) intron (NM_182562, intron 5 of 6) 71744 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-65649257-2 chr12 65649140 65649374 0 91.800003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6885 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr15-100602308-2 chr15 100602202 100602415 0 89.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001040616) promoter-TSS (NM_001040616) -68 NM_001040616 55180 Hs.105633 NM_018148 ENSG00000140471 LINS1 LINS|MRT27|WINS1 lines homolog 1 protein-coding Merged-chr12-65631791-2 chr12 65631675 65631908 0 88.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120432, intron 1 of 4) intron (NR_120432, intron 1 of 4) 10581 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr12-95204580-2 chr12 95204463 95204698 0 86.550003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 2 of 20) intron (NM_018351, intron 2 of 20) 12884 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding Merged-chr12-68746092-2 chr12 68745985 68746199 0 85.649994 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_018656) promoter-TSS (NM_018656) -64 NM_018656 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding Merged-chr12-69070525-1 chr12 69070425 69070625 0 82.300003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -107285 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM -0 carboxypeptidase M protein-coding Merged-chr20-14477298-1 chr20 14477198 14477398 0 77.900002 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 3 of 16) intron (NM_080676, intron 3 of 16) -77086 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA Merged-chr1-185973858-2 chr1 185973753 185973963 0 77.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 15 of 106) intron (NM_031935, intron 15 of 106) 239307 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr12-65657125-2 chr12 65657022 65657228 0 75.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -14753 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr12-68808961-1 chr12 68808861 68809061 0 75.300003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278462) promoter-TSS (NM_001278462) -56 NM_001145340 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding Merged-chr12-79452190-2 chr12 79452080 79452301 0 75.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_001291901) TTS (NM_001291901) 32933 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr12-74043572-2 chr12 74043468 74043676 0 74.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 249059 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 -0 uncharacterized LOC100507377 ncRNA Merged-chr12-92760045-2 chr12 92759935 92760156 0 74.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001004330, intron 8 of 11) MLT1J|LTR|ERVL-MaLR 23556 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr12-92746361-2 chr12 92746260 92746463 0 73.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001004330, intron 5 of 11) intron (NM_001004330, intron 5 of 11) 9872 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr12-92561769-2 chr12 92561667 92561871 0 73.449997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 95090 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr12-69053198-2 chr12 69053096 69053301 0 73.399994 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -89958 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM -0 carboxypeptidase M protein-coding Merged-chr5-41527348-2 chr5 41527244 41527452 0 72.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER41B|LTR|ERV1 -16720 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 -0 phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding Merged-chr12-70543639-2 chr12 70543534 70543745 0 71.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330204, intron 21 of 32) intron (NM_001330204, intron 21 of 32) 66385 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr12-75480779-2 chr12 75480676 75480882 0 71.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006851) promoter-TSS (NM_006851) 46 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding Merged-chr12-57633253-2 chr12 57633121 57633386 0 69.800003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001276468) promoter-TSS (NM_001276468) -14 NM_001478 2583 Hs.159481 NM_001478 ENSG00000135454 B4GALNT1 GALGT|GALNACT|GalNAc-T|SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 protein-coding Merged-chr12-95205796-2 chr12 95205668 95205924 0 69.300003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 2 of 20) intron (NM_018351, intron 2 of 20) 11668 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding Merged-chr12-69059634-2 chr12 69059527 69059742 0 68.699997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -96394 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM -0 carboxypeptidase M protein-coding Merged-chr12-69360203-2 chr12 69360056 69360350 0 67.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006530, intron 1 of 6) CpG 493 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr12-68746767-1 chr12 68746667 68746867 0 67.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_020401) TTS (NM_020401) 611 NM_018656 55508 Hs.506011 NM_018656 ENSG00000175782 SLC35E3 BLOV1 solute carrier family 35 member E3 protein-coding Merged-chr1-188782426-2 chr1 188782323 188782530 0 66.449997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F2|LTR|ERVL-MaLR 1338798 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-65537145-2 chr12 65537015 65537275 0 64.699997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120432, intron 4 of 4) MER125|DNA|DNA 20166 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr12-75334479-1 chr12 75334379 75334579 0 64.699997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304964) promoter-TSS (NM_001304964) -160 NM_152779 256710 Hs.567788 NM_152779 ENSG00000173401 GLIPR1L1 ALKN2972|PRO7434 GLI pathogenesis related 1 like 1 protein-coding Merged-chr1-188706922-2 chr1 188706814 188707030 0 64.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger7|DNA|TcMar-Tigger 1263294 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-92650096-2 chr12 92649956 92650236 0 63.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -52747 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr12-82124906-2 chr12 82124786 82125027 0 63.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PREC2|LINE|L1 171187 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr12-95169522-2 chr12 95169416 95169628 0 62.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 3 of 20) Plat_L3|LINE|CR1 47942 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding Merged-chr1-172532889-2 chr1 172532769 172533010 0 61.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014283) promoter-TSS (NM_014283) -229 NM_001282751 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr12-92552080-1 chr12 92551980 92552180 0 60.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 85401 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr12-92735240-1 chr12 92735140 92735340 0 59.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1249 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr12-58148641-2 chr12 58148506 58148776 0 58.449997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 60749 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LOC105369785 -0 uncharacterized LOC105369785 ncRNA Merged-chr10-10782781-1 chr10 10782681 10782881 0 58.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 2 of 16) intron (NM_001326319, intron 2 of 16) 12133 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr12-92539333-1 chr12 92539233 92539433 0 57.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 72654 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr1-183881831-1 chr1 183881731 183881931 0 57.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001297672, intron 5 of 16) intron (NM_001297672, intron 5 of 16) 76750 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding Merged-chr12-79420373-1 chr12 79420273 79420473 0 56.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001135806, intron 8 of 9) intron (NM_001135806, intron 8 of 9) 1116 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr16-56246181-2 chr16 56246073 56246289 0 55.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_037499) TTS (NR_037499) 661 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr15-99123829-2 chr15 99123712 99123947 0 55.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_145728, intron 2 of 3) intron (NM_145728, intron 2 of 3) 18749 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr15-98428526-2 chr15 98428423 98428629 0 55.199997 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG 85856 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-83823871-2 chr12 83823752 83823990 0 54.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR28C|LTR|ERV1 1088958 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr12-75330344-1 chr12 75330244 75330444 0 54.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286547) promoter-TSS (NM_001286547) -288 NM_001286547 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding Merged-chr10-10795049-2 chr10 10794946 10795153 0 53.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_027082) promoter-TSS (NR_027082) -135 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr12-92594074-2 chr12 92593972 92594177 0 53.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -108769 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr12-79424230-1 chr12 79424130 79424330 0 52.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001135806, intron 8 of 9) intron (NM_001135806, intron 8 of 9) 4973 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr12-69359697-2 chr12 69359595 69359800 0 51.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001300950) promoter-TSS (NM_001300950) -13 NM_001300950 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr12-65532945-2 chr12 65532824 65533067 0 50.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120432, intron 4 of 4) intron (NR_120432, intron 4 of 4) 24366 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr15-100559465-2 chr15 100559315 100559615 0 49.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_073405) promoter-TSS (NR_073405) -182 NR_073405 441733 Hs.12250 NR_073405 PRKXP1 -0 protein kinase, X-linked, pseudogene 1 pseudo Merged-chr16-62805426-1 chr16 62805326 62805526 0 49.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1M3b|LINE|L1 -768591 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding Merged-chr15-84912428-2 chr15 84912300 84912557 0 49.300003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321722, intron 9 of 18) intron (NM_001321722, intron 9 of 18) 27767 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr1-186082445-1 chr1 186082345 186082545 0 49.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031935, intron 56 of 106) MLT1H|LTR|ERVL-MaLR -213828 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr12-69357715-2 chr12 69357606 69357824 0 49.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1995 NM_001300950 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr15-98548287-2 chr15 98548182 98548393 0 48.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -33905 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr1-172588902-1 chr1 172588802 172589002 0 48.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_014283, exon 18 of 24) exon (NM_014283, exon 18 of 24) 55784 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr1-186102661-1 chr1 186102561 186102761 0 47.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031935, intron 68 of 106) intron (NM_031935, intron 68 of 106) -193612 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr1-186212795-2 chr1 186212689 186212901 0 47.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -83478 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr12-69689286-2 chr12 69689179 69689394 0 46.650002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_152439) promoter-TSS (NM_152439) -9 NR_104220 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding Merged-chr12-78802773-2 chr12 78802649 78802898 0 46.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -61220 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 P65|SVP65|SYT synaptotagmin 1 protein-coding Merged-chr12-70449593-1 chr12 70449493 70449693 0 45.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 83311 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr1-171781488-2 chr1 171781333 171781643 0 45.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014955) promoter-TSS (NM_014955) -133 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr12-54993403-2 chr12 54993297 54993509 0 45.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger3b|DNA|TcMar-Tigger -8657 NM_001136030 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding Merged-chr15-99251279-2 chr15 99251164 99251394 0 45.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001288616) promoter-TSS (NM_001288616) -53 NM_001288616 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding Merged-chr12-65495419-2 chr12 65495285 65495553 0 45.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120431, intron 3 of 3) intron (NR_120431, intron 3 of 3) 61892 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr10-3227141-1 chr10 3227041 3227241 0 44.900002 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -54300 NR_144639 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding Merged-chr12-92598162-1 chr12 92598062 92598262 0 44.900002 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -104681 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr12-95173870-1 chr12 95173770 95173970 0 44.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018351, intron 2 of 20) intron (NM_018351, intron 2 of 20) 43594 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding Merged-chr12-57694004-2 chr12 57693880 57694128 0 44.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006812) promoter-TSS (NM_006812) 49 NM_001261421 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9, endoplasmic reticulum lectin protein-coding Merged-chr12-65526084-2 chr12 65525972 65526197 0 44.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120432, intron 4 of 4) MLT1G3|LTR|ERVL-MaLR 31227 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr1-172746477-2 chr1 172746367 172746587 0 44.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 87469 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-98954628-1 chr15 98954528 98954728 0 44.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 20 of 20) intron (NM_001291858, intron 20 of 20) 51028 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr12-75511731-2 chr12 75511620 75511842 0 43.349998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_007043) promoter-TSS (NM_007043) -93 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding Merged-chr16-56245393-2 chr16 56245284 56245502 0 43.300003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_037499) promoter-TSS (NR_037499) -127 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr12-83819019-1 chr12 83818919 83819119 0 42.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1H2|LTR|ERVL-MaLR 1093810 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr15-84915141-2 chr15 84915020 84915262 0 42.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321722, intron 9 of 18) intron (NM_001321722, intron 9 of 18) 30480 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr15-98519269-1 chr15 98519169 98519369 0 42.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4887 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-92608627-1 chr12 92608527 92608727 0 42.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -94216 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr15-99249605-1 chr15 99249505 99249705 0 42.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001288615) promoter-TSS (NM_001288615) 14 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding Merged-chr13-74316771-1 chr13 74316671 74316871 0 42.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 85327 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr12-69585363-2 chr12 69585245 69585481 0 42.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006431) promoter-TSS (NM_006431) -65 NM_006431 10576 Hs.189772 NM_006431 ENSG00000166226 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1 subunit 2 protein-coding Merged-chr1-188689749-1 chr1 188689649 188689849 0 41.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR40A1|LTR|ERVL 1246121 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-92570516-1 chr12 92570416 92570616 0 41.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 103837 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr1-186188404-1 chr1 186188304 186188504 0 41.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031935, intron 106 of 106) intron (NM_031935, intron 106 of 106) -107869 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr13-75549443-2 chr13 75549335 75549552 0 41.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001270952) promoter-TSS (NM_001270952) -4 NM_001287394 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding Merged-chr21-41069173-1 chr21 41069073 41069273 0 41.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 78891 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Merged-chr12-83701049-1 chr12 83700949 83701149 0 41.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (CA)n|Simple_repeat|Simple_repeat 1013894 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr12-69284255-1 chr12 69284155 69284355 0 40.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11037 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA Merged-chr12-57744915-2 chr12 57744800 57745031 0 40.549999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001330168) promoter-TSS (NM_001330168) -74 NM_005981 6302 Hs.632708 NM_005981 ENSG00000135452 TSPAN31 SAS tetraspanin 31 protein-coding Merged-chr4-24210641-2 chr4 24210487 24210795 0 40.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) intron (NM_001330751, intron 2 of 14) 262188 NM_001330751 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr13-73677471-1 chr13 73677371 73677571 0 40.099998 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 113227 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 -0 long intergenic non-protein coding RNA 392 ncRNA Merged-chr5-41835816-2 chr5 41835694 41835939 0 39.800003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000436, intron 7 of 16) intron (NM_000436, intron 7 of 16) -34214 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 -0 OXCT1 antisense RNA 1 ncRNA Merged-chr12-95073673-2 chr12 95073540 95073806 0 39.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003297) promoter-TSS (NM_003297) -45 NM_001032287 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding Merged-chr10-10606023-1 chr10 10605923 10606123 0 39.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 143508 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr5-912635-2 chr5 912483 912787 0 39.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_004237, intron 10 of 12) CpG 19781 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr12-69534617-2 chr12 69534500 69534734 0 39.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001278356, intron 3 of 8) intron (NM_001278356, intron 3 of 8) -50106 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA Merged-chr12-95098405-1 chr12 95098305 95098505 0 38.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018351, intron 14 of 20) L2b|LINE|L2 -24777 NM_001032287 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding Merged-chr12-92624396-1 chr12 92624296 92624496 0 38.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -78447 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr12-58540655-2 chr12 58540520 58540791 0 38.550003 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -51047 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 -0 uncharacterized LOC100506869 ncRNA Merged-chr10-3249060-2 chr10 3248956 3249164 0 38.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -69635 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr20-14623051-1 chr20 14622951 14623151 0 38.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_104193, intron 3 of 4) LTR16|LTR|ERVL 68667 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA Merged-chr1-188652892-2 chr1 188652768 188653016 0 38.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AmnSINE1|SINE|5S-Deu-L2 1209264 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr13-73677091-1 chr13 73676991 73677191 0 38.099998 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 112847 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 -0 long intergenic non-protein coding RNA 392 ncRNA Merged-chr1-186059528-1 chr1 186059428 186059628 0 37.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 46 of 106) intron (NM_031935, intron 46 of 106) -236745 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr15-100430559-1 chr15 100430459 100430659 0 37.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120374, intron 4 of 4) intron (NR_120374, intron 4 of 4) 57620 NR_120374 102723320 Hs.416099 NR_120374 CERS3-AS1 -0 CERS3 antisense RNA 1 ncRNA Merged-chr15-100593094-1 chr15 100592994 100593194 0 37.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001040616, intron 1 of 6) intron (NM_001040616, intron 1 of 6) 9146 NM_001040616 55180 Hs.105633 NM_018148 ENSG00000140471 LINS1 LINS|MRT27|WINS1 lines homolog 1 protein-coding Merged-chr20-1470225-2 chr20 1470068 1470383 0 37.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR60|LTR|ERV1 -2533 NR_038164 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr12-65602696-2 chr12 65602583 65602810 0 36.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 2 of 4) intron (NR_120434, intron 2 of 4) 39676 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr1-185917025-1 chr1 185916925 185917125 0 36.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031935, intron 6 of 106) MLT1J1|LTR|ERVL-MaLR 182474 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr15-100627949-1 chr15 100627849 100628049 0 36.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_198243, intron 4 of 5) intron (NM_198243, intron 4 of 5) 25399 NM_198243 140460 Hs.31845 NM_024708 ENSG00000183475 ASB7 -0 ankyrin repeat and SOCS box containing 7 protein-coding Merged-chr9-84343312-1 chr9 84343212 84343412 0 36.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022127, intron 1 of 18) LTR23|LTR|ERV1 -2533 NR_037638 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr12-57765146-1 chr12 57765046 57765246 0 36.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_000785, exon 4 of 9) exon (NM_000785, exon 4 of 9) 2047 NM_000785 1594 Hs.524528 NM_000785 ENSG00000111012 CYP27B1 CP2B|CYP1|CYP1alpha|CYP27B|P450c1|PDDR|VDD1|VDDR|VDDRI|VDR cytochrome P450 family 27 subfamily B member 1 protein-coding Merged-chr15-90717259-2 chr15 90717155 90717364 0 36.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_120372) promoter-TSS (NR_120372) -68 NM_001287248 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|RECQ2|RECQL2|RECQL3 Bloom syndrome RecQ like helicase protein-coding Merged-chr6-113879669-1 chr6 113879569 113879769 0 36.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6322 NR_038863 285758 Hs.359399 NR_038863 ENSG00000227502 LINC01268 -0 long intergenic non-protein coding RNA 1268 ncRNA Merged-chr12-75178197-1 chr12 75178097 75178297 0 36.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153748, intron 2 of 4) intron (NM_153748, intron 2 of 4) 31551 NM_001260498 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding Merged-chr12-65524801-1 chr12 65524701 65524901 0 35.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120432, intron 4 of 4) intron (NR_120432, intron 4 of 4) 32510 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr1-186183408-2 chr1 186183303 186183514 0 35.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 105 of 106) intron (NM_031935, intron 105 of 106) -112865 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr12-69157225-2 chr12 69157115 69157335 0 35.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR50|LTR|ERVL -82312 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr12-73935925-1 chr12 73935825 73936025 0 35.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR41|LTR|ERVL 356706 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 -0 uncharacterized LOC100507377 ncRNA Merged-chr12-65668846-1 chr12 65668746 65668946 0 35.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -26474 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr12-65566108-1 chr12 65566008 65566208 0 35.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120434, intron 4 of 4) intron (NR_120434, intron 4 of 4) -8797 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr10-10605620-2 chr10 10605502 10605739 0 35.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 143105 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr9-80062077-2 chr9 80061950 80062205 0 35.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LFSINE_Vert|SINE|tRNA 87054 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr12-69639564-1 chr12 69639464 69639664 0 34.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -28402 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr10-10589795-1 chr10 10589695 10589895 0 34.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) MIRb|SINE|MIR 127280 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-84948518-2 chr15 84948388 84948649 0 34.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321722, intron 18 of 18) intron (NM_001321722, intron 18 of 18) -31995 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr20-1435045-1 chr20 1434945 1435145 0 34.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER66C|LTR|ERV1 32647 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr12-57632376-1 chr12 57632276 57632476 0 34.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001276469, intron 1 of 5) CpG-5728 305 NM_001276468 2583 Hs.159481 NM_001478 ENSG00000135454 B4GALNT1 GALGT|GALNACT|GalNAc-T|SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 protein-coding Merged-chr12-75453114-1 chr12 75453014 75453214 0 34.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 -27619 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding Merged-chr12-74088360-1 chr12 74088260 74088460 0 33.900002 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER54A|LTR|ERVL 204271 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 -0 uncharacterized LOC100507377 ncRNA Merged-chr12-65565701-2 chr12 65565600 65565803 0 33.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 4 of 4) intron (NR_120434, intron 4 of 4) -8390 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr10-10891531-1 chr10 10891431 10891631 0 33.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326325, intron 2 of 15) MIRb|SINE|MIR 60632 NR_024410 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 -0 long intergenic non-protein coding RNA 710 ncRNA Merged-chr12-69879559-1 chr12 69879459 69879659 0 33.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182530, intron 4 of 24) intron (NM_182530, intron 4 of 24) 54236 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr1-172286960-2 chr1 172286854 172287067 0 33.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) intron (NM_015569, intron 15 of 20) -133728 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr15-99213393-1 chr15 99213293 99213493 0 33.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288616, intron 6 of 11) intron (NM_001288616, intron 6 of 11) 36226 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding Merged-chr21-41642088-2 chr21 41641981 41642195 0 32.450001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -37214 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr12-75489734-2 chr12 75489589 75489879 0 32.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006851, intron 2 of 5) L2a|LINE|L2 9001 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding Merged-chr1-186237084-1 chr1 186236984 186237184 0 32.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -59189 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr15-98945906-1 chr15 98945806 98946006 0 32.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 19 of 20) intron (NM_001291858, intron 19 of 20) 59750 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-98548836-1 chr15 98548736 98548936 0 32.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -34454 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-92750799-1 chr12 92750699 92750899 0 31.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001004330, intron 5 of 11) intron (NM_001004330, intron 5 of 11) 14310 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr15-92077519-2 chr15 92077414 92077625 0 31.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 223219 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr20-462654-1 chr20 462554 462754 0 31.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144628) promoter-TSS (NM_144628) -101 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr1-172745171-1 chr1 172745071 172745271 0 31.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 86163 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr16-56241789-1 chr16 56241689 56241889 0 31.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) intron (NM_020988, intron 2 of 8) -3731 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr1-186375424-2 chr1 186375257 186375591 0 31.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_017847) promoter-TSS (NM_017847) -99 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR -0 translocated promoter region, nuclear basket protein protein-coding Merged-chr1-172444111-2 chr1 172444006 172444216 0 31.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_153747) promoter-TSS (NM_153747) -21 NM_002642 5279 Hs.188456 NM_002642 ENSG00000135845 PIGC GPI2 phosphatidylinositol glycan anchor biosynthesis class C protein-coding Merged-chr12-92717434-1 chr12 92717334 92717534 0 31.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 14591 NM_001178097 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr1-183868824-1 chr1 183868724 183868924 0 31.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001297672, intron 4 of 16) intron (NM_001297672, intron 4 of 16) 63743 NM_001297672 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding Merged-chr20-1325352-2 chr20 1325242 1325462 0 30.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_040047) promoter-TSS (NR_040047) 9 NR_040047 100507495 Hs.655785 NR_040047 ENSG00000234684 SDCBP2-AS1 -0 SDCBP2 antisense RNA 1 ncRNA Merged-chr15-98897212-2 chr15 98897098 98897326 0 30.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 4 of 20) intron (NM_001291858, intron 4 of 20) 108444 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr5-42057424-1 chr5 42057324 42057524 0 30.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 117921 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr12-92632206-1 chr12 92632106 92632306 0 30.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -70637 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr1-189021796-1 chr1 189021696 189021896 0 30.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER70C|LTR|ERVL 1454214 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding Merged-chr12-92708452-1 chr12 92708352 92708552 0 30.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_001037671) TTS (NM_001037671) 5609 NM_001178097 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr9-76688136-1 chr9 76688036 76688236 0 29.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001308049, intron 1 of 11) intron (NM_001308049, intron 1 of 11) 4279 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr12-75527148-1 chr12 75527048 75527248 0 29.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15510 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding Merged-chr21-41630453-2 chr21 41630348 41630559 0 29.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -48849 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr12-94983968-1 chr12 94983868 94984068 0 29.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258338, intron 2 of 2) intron (NM_001258338, intron 2 of 2) 19745 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr15-98519476-1 chr15 98519376 98519576 0 29.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -5094 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-92719823-1 chr12 92719723 92719923 0 29.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -16666 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr12-69656109-1 chr12 69656009 69656209 0 29.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032735, intron 9 of 9) Charlie1|DNA|hAT-Charlie 33168 NM_152439 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding Merged-chr15-91456424-2 chr15 91456324 91456525 0 29.199999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PB1|LINE|L1 -6915 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 CRAT37 -0 cervical cancer-associated transcript 37 ncRNA Merged-chr5-1247044-2 chr5 1246943 1247145 0 29.199999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_182632) TTS (NM_182632) 21689 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr15-98727800-2 chr15 98727689 98727911 0 28.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -56626 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr12-57736065-1 chr12 57735965 57736165 0 28.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014770, intron 1 of 17) CpG 2181 NM_001122772 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding Merged-chr10-3239820-2 chr10 3239718 3239922 0 28.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -66979 NR_144639 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding Merged-chr1-171817878-2 chr1 171817774 171817982 0 28.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -23600 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr4-23935104-2 chr4 23934977 23935231 0 28.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -45027 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr15-99212113-2 chr15 99211986 99212241 0 28.349998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001288616, intron 6 of 11) intron (NM_001288616, intron 6 of 11) 37506 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding Merged-chr12-54988562-2 chr12 54988462 54988662 0 28.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -3816 NM_001136030 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding Merged-chr9-76818451-2 chr9 76818350 76818553 0 28.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) intron (NR_131751, intron 5 of 15) 54015 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr2-157875204-1 chr2 157875104 157875304 0 28.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001105) promoter-TSS (NM_001105) -93 NM_001105 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr12-92596657-1 chr12 92596557 92596757 0 28.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -106186 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 -0 chromosome 12 open reading frame 74 protein-coding Merged-chr1-171645056-2 chr1 171644931 171645181 0 28.150000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000261, intron 1 of 2) LTR41B|LTR|ERVL 7577 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding Merged-chr2-157792894-1 chr2 157792794 157792994 0 28.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001347663, intron 3 of 10) intron (NM_001347663, intron 3 of 10) 45384 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr12-78470810-1 chr12 78470710 78470910 0 27.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1K|LTR|ERVL-MaLR -111064 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr20-14566713-1 chr20 14566613 14566813 0 27.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_104193, intron 1 of 4) LTR16|LTR|ERVL 12329 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA Merged-chr12-79422274-1 chr12 79422174 79422374 0 27.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001135806, intron 8 of 9) L1ME3C|LINE|L1 3017 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr1-172639003-1 chr1 172638903 172639103 0 27.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -20005 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-98292624-2 chr15 98292507 98292741 0 27.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -203871 NR_120325 101927332 NR_120325 LINC01582 -0 long intergenic non-protein coding RNA 1582 ncRNA Merged-chr9-83432415-1 chr9 83432315 83432515 0 27.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 35327 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr1-172639475-1 chr1 172639375 172639575 0 27.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19533 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr12-69356564-1 chr12 69356464 69356664 0 27.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC4|LINE|L1 -3146 NM_001300950 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr6-46453394-1 chr6 46453294 46453494 0 27.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) 37929 NM_001251974 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding Merged-chr12-94994471-1 chr12 94994371 94994571 0 26.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018838, intron 2 of 3) intron (NM_018838, intron 2 of 3) 9242 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr12-65603696-2 chr12 65603590 65603802 0 26.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 2 of 4) intron (NR_120434, intron 2 of 4) 38676 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr12-83713138-2 chr12 83713029 83713247 0 26.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 1025983 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr15-98568185-2 chr15 98568062 98568309 0 26.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic BLACKJACK|DNA|hAT-Blackjack -53803 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr15-98852472-2 chr15 98852368 98852577 0 26.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) CpG 68046 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr1-186662924-1 chr1 186662824 186663024 0 26.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L4_C_Mam|LINE|RTE-X 17503 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr4-8158994-1 chr4 8158894 8159094 0 26.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130083) promoter-TSS (NM_001130083) -162 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 -0 actin binding LIM protein family member 2 protein-coding Merged-chr15-98865496-1 chr15 98865396 98865596 0 26.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 81070 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr20-14434631-1 chr20 14434531 14434731 0 25.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 3 of 16) L2|LINE|L2 -96964 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding Merged-chr1-188642996-1 chr1 188642896 188643096 0 25.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER50C|LTR|ERV1 1199368 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr15-92011787-2 chr15 92011650 92011925 0 25.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 157487 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-70430515-1 chr12 70430415 70430615 0 25.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_014505, exon 3 of 3) exon (NM_014505, exon 3 of 3) 64233 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr15-98928150-1 chr15 98928050 98928250 0 25.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 13 of 20) L2|LINE|L2 77506 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-92091331-2 chr15 92091201 92091462 0 25.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 237031 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-99156247-1 chr15 99156147 99156347 0 25.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001288615, exon 12 of 14) exon (NM_001288615, exon 12 of 14) 51167 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr15-92069747-1 chr15 92069647 92069847 0 25.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 215447 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-8183470-2 chr4 8183361 8183579 0 25.599998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -15774 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr20-1437529-1 chr20 1437429 1437629 0 25.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 30163 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr12-71070935-1 chr12 71070835 71071035 0 25.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 87064 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr15-98779762-1 chr15 98779662 98779862 0 25.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -4664 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr13-73754934-1 chr13 73754834 73755034 0 25.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007249, intron 6 of 7) intron (NM_007249, intron 6 of 7) 190690 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 -0 long intergenic non-protein coding RNA 392 ncRNA Merged-chr15-98823208-1 chr15 98823108 98823308 0 25.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 38782 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-99212570-1 chr15 99212470 99212670 0 25.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288616, intron 6 of 11) intron (NM_001288616, intron 6 of 11) 37049 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding Merged-chr1-172654744-2 chr1 172654625 172654864 0 25.350000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4264 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-98914792-2 chr15 98914688 98914897 0 25.349998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 8 of 20) intron (NM_001291858, intron 8 of 20) 90864 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr12-69239554-1 chr12 69239454 69239654 0 25.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300947) promoter-TSS (NM_001300947) 17 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr12-69648713-1 chr12 69648613 69648813 0 25.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282614, intron 9 of 9) intron (NM_001282614, intron 9 of 9) -37551 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr15-98475908-1 chr15 98475808 98476008 0 25.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182562, intron 4 of 6) L1M4a1|LINE|L1 38474 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-69415905-1 chr12 69415805 69416005 0 25.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -54444 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr1-171841403-1 chr1 171841303 171841503 0 25.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278252) promoter-TSS (NM_001278252) -75 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr9-80874602-1 chr9 80874502 80874702 0 25.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 814933 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr1-172637686-1 chr1 172637586 172637786 0 25.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1H1|LTR|ERVL-MaLR -21322 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr12-65617136-1 chr12 65617036 65617236 0 25.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120434, intron 1 of 4) AluJb|SINE|Alu 25236 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr15-92082463-1 chr15 92082363 92082563 0 24.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 228163 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-186181196-1 chr1 186181096 186181296 0 24.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 104 of 106) intron (NM_031935, intron 104 of 106) -115077 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr15-100435285-1 chr15 100435185 100435385 0 24.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120374, intron 4 of 4) intron (NR_120374, intron 4 of 4) 62346 NR_120374 102723320 Hs.416099 NR_120374 CERS3-AS1 -0 CERS3 antisense RNA 1 ncRNA Merged-chr12-92466449-1 chr12 92466349 92466549 0 24.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_144532) promoter-TSS (NR_144532) -230 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr1-172399554-2 chr1 172399385 172399723 0 24.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 20 of 20) intron (NM_015569, intron 20 of 20) -21134 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr16-56215732-1 chr16 56215632 56215832 0 24.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) intron (NM_020988, intron 2 of 8) -21207 NR_026889 26077 Hs.721567 NR_026889 ENSG00000261439 DKFZP434H168 -0 uncharacterized LOC26077 ncRNA Merged-chr10-12448888-2 chr10 12448782 12448995 0 24.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) MIR|SINE|MIR 99345 NM_153498 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding Merged-chr12-92729518-1 chr12 92729418 92729618 0 24.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6971 NM_001004330 440107 Hs.591013 NM_001004330 ENSG00000187510 PLEKHG7 -0 pleckstrin homology and RhoGEF domain containing G7 protein-coding Merged-chr15-92803948-2 chr15 92803836 92804060 0 24.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 8464 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr16-49770183-1 chr16 49770083 49770283 0 24.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015069, intron 2 of 7) (TGAA)n|Simple_repeat|Simple_repeat 52555 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding Merged-chr15-92097745-1 chr15 92097645 92097845 0 24.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 3 of 9) intron (NM_013272, intron 3 of 9) 243445 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr21-26613442-1 chr21 26613342 26613542 0 24.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -40038 NM_052954 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding Merged-chr16-62743579-1 chr16 62743479 62743679 0 23.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -706744 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding Merged-chr15-91802065-1 chr15 91801965 91802165 0 23.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -51643 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-70590105-1 chr12 70590005 70590205 0 23.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001206972, exon 6 of 31) exon (NM_001206972, exon 6 of 31) 19919 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr1-186396119-1 chr1 186396019 186396219 0 23.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001164246, intron 8 of 12) intron (NM_001164246, intron 8 of 12) -4453 NM_022375 10896 Hs.679230 NM_022375 ENSG00000262180 OCLM TISR oculomedin protein-coding Merged-chr12-69154778-1 chr12 69154678 69154878 0 23.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger8|DNA|TcMar-Tigger -84759 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr1-172578249-1 chr1 172578149 172578349 0 23.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282751, intron 13 of 21) intron (NM_001282751, intron 13 of 21) 45131 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr16-56236143-1 chr16 56236043 56236243 0 23.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) intron (NM_020988, intron 2 of 8) -9377 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr15-90932623-1 chr15 90932523 90932723 0 23.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286451) promoter-TSS (NM_001286451) -54 NM_001286451 374659 Hs.349979 NM_198527 ENSG00000184508 HDDC3 (ppGpp)ase|MESH1 HD domain containing 3 protein-coding Merged-chr12-79470796-1 chr12 79470696 79470896 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic SATR2|Satellite|Satellite 51539 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr12-92575303-1 chr12 92575203 92575403 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 108624 NR_144532 100507616 Hs.339918 NR_144532 LOC100507616 -0 uncharacterized LOC100507616 ncRNA Merged-chr5-42094179-1 chr5 42094079 42094279 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1A0|LTR|ERVL-MaLR 81166 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr16-56230873-1 chr16 56230773 56230973 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) MIR3|SINE|MIR -14647 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr21-41641382-1 chr21 41641282 41641482 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -37920 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr12-54998708-1 chr12 54998608 54998808 0 23.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13962 NM_001136030 9840 Hs.33187 NM_014796 ENSG00000135426 TESPA1 HSPC257|KIAA0748 thymocyte expressed, positive selection associated 1 protein-coding Merged-chr1-172358502-2 chr1 172358355 172358649 0 23.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -62186 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr3-196942502-2 chr3 196942382 196942623 0 23.150000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001308036) promoter-TSS (NM_001308036) -62 NM_001308036 22916 Hs.591671 NM_007362 ENSG00000114503 NCBP2 CBC2|CBP20|NIP1|PIG55 nuclear cap binding protein subunit 2 protein-coding Merged-chr5-1276830-1 chr5 1276730 1276930 0 23.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_198253, intron 6 of 15) L1M5|LINE|L1 18217 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding Merged-chr20-1393175-1 chr20 1393075 1393275 0 23.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000801) promoter-TSS (NM_000801) -3 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr12-70154324-1 chr12 70154224 70154424 0 23.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR8|LTR|ERV1 -88670 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr1-186621295-1 chr1 186621195 186621395 0 23.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT2F|LTR|ERVL 59132 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr12-95003783-2 chr12 95003672 95003894 0 22.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001258338) promoter-TSS (NM_001258338) -70 NM_001258338 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr12-57657901-1 chr12 57657801 57658001 0 22.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER57-int|LTR|ERV1 -24662 NM_001478 2583 Hs.159481 NM_001478 ENSG00000135454 B4GALNT1 GALGT|GALNACT|GalNAc-T|SPG26 beta-1,4-N-acetyl-galactosaminyltransferase 1 protein-coding Merged-chr10-10686100-1 chr10 10686000 10686200 0 22.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 2 of 16) intron (NM_001326319, intron 2 of 16) 108814 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr12-69555666-2 chr12 69555562 69555771 0 22.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006654, intron 4 of 9) MER8|DNA|TcMar-Tigger -29057 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA Merged-chr9-84182348-2 chr9 84182245 84182452 0 22.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 118905 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr1-172449216-1 chr1 172449116 172449316 0 22.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139240, intron 3 of 6) intron (NM_139240, intron 3 of 6) -3677 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr15-100569691-2 chr15 100569565 100569817 0 22.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001040616, exon 7 of 7) exon (NM_001040616, exon 7 of 7) -10408 NR_073405 441733 Hs.12250 NR_073405 PRKXP1 -0 protein kinase, X-linked, pseudogene 1 pseudo Merged-chr12-69372988-1 chr12 69372888 69373088 0 22.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006530, intron 6 of 6) L1MA3|LINE|L1 13278 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr15-98926995-1 chr15 98926895 98927095 0 22.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 13 of 20) intron (NM_001291858, intron 13 of 20) 78661 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-100505630-1 chr15 100505530 100505730 0 22.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001290341, intron 3 of 13) L1MB8|LINE|L1 38656 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding Merged-chr13-69274418-1 chr13 69274318 69274518 0 22.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_125752, intron 1 of 3) intron (NR_125752, intron 1 of 3) 52072 NR_125752 103689913 Hs.585628 NR_125752 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA Merged-chr1-172719896-1 chr1 172719796 172719996 0 22.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 60888 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr12-66169704-1 chr12 66169604 66169804 0 22.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282606, intron 1 of 7) CpG 368 NM_001282610 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding Merged-chr20-431611-1 chr20 431511 431711 0 22.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_136659, exon 12 of 12) non-coding (NR_136659, exon 12 of 12) 23561 NM_001323960 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding Merged-chr15-98939986-1 chr15 98939886 98940086 0 22.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 18 of 20) intron (NM_001291858, intron 18 of 20) 65670 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr10-10755736-1 chr10 10755636 10755836 0 22.299999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 2 of 16) intron (NM_001326319, intron 2 of 16) 39178 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr21-41361898-1 chr21 41361798 41361998 0 22.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002463) promoter-TSS (NM_002463) -125 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr20-543783-2 chr20 543676 543890 0 22.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001895) promoter-TSS (NM_001895) 55 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr15-98874015-2 chr15 98873890 98874141 0 22.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 89589 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-90931874-2 chr15 90931737 90932012 0 22.099998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001286451, exon 3 of 4) exon (NM_001286451, exon 3 of 4) 695 NM_198527 374659 Hs.349979 NM_198527 ENSG00000184508 HDDC3 (ppGpp)ase|MESH1 HD domain containing 3 protein-coding Merged-chr15-100494908-1 chr15 100494808 100495008 0 22.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_178842, intron 4 of 12) L1M4|LINE|L1 49378 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding Merged-chr6-113859162-1 chr6 113859062 113859262 0 22.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002356, intron 1 of 1) CpG 1827 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding Merged-chr15-92831888-2 chr15 92831776 92832000 0 21.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 36404 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr13-74211113-2 chr13 74210963 74211263 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -20331 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr10-10677701-1 chr10 10677601 10677801 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 117213 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr1-172662894-1 chr1 172662794 172662994 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000639, intron 2 of 3) intron (NM_000639, intron 2 of 3) 3886 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr1-172451324-1 chr1 172451224 172451424 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139240, intron 3 of 6) intron (NM_139240, intron 3 of 6) -1569 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr4-23945884-1 chr4 23945784 23945984 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -55807 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr12-69569494-1 chr12 69569394 69569594 0 21.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006654, intron 6 of 9) intron (NM_006654, intron 6 of 9) -15229 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA Merged-chr5-911841-2 chr5 911729 911953 0 21.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_004237, intron 9 of 12) intron (NM_004237, intron 9 of 12) 18987 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr4-26788121-2 chr4 26788001 26788241 0 21.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 72123 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr15-98335151-1 chr15 98335051 98335251 0 21.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 179231 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-69382529-1 chr12 69382429 69382629 0 21.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006530, intron 6 of 6) L1MA3|LINE|L1 22819 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr10-10798343-1 chr10 10798243 10798443 0 21.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001326327) promoter-TSS (NM_001326327) -368 NM_001326328 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr1-172429471-1 chr1 172429371 172429571 0 21.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_139240, intron 1 of 6) intron (NM_139240, intron 1 of 6) 8783 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr15-91982621-1 chr15 91982521 91982721 0 21.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 128321 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr21-41366891-2 chr21 41366770 41367012 0 21.650002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002463, intron 1 of 13) intron (NM_002463, intron 1 of 13) 4868 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr15-90845350-2 chr15 90845218 90845482 0 21.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -23242 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr5-1260942-1 chr5 1260842 1261042 0 21.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001193376, intron 10 of 14) intron (NM_001193376, intron 10 of 14) 34105 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding Merged-chr15-73700401-1 chr15 73700301 73700501 0 21.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024736, intron 2 of 9) intron (NM_001024736, intron 2 of 9) 15670 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr15-98851055-1 chr15 98850955 98851155 0 21.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 66629 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-84845736-1 chr15 84845636 84845836 0 21.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020778, intron 5 of 13) L1MEf|LINE|L1 29056 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr9-76817614-2 chr9 76817469 76817760 0 21.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) MLT1J1|LTR|ERVL-MaLR 53178 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr12-69470289-2 chr12 69470168 69470410 0 21.450001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001042555) promoter-TSS (NM_001042555) -60 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr20-1325879-2 chr20 1325775 1325983 0 21.350000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001199784) promoter-TSS (NM_001199784) -10 NM_001199784 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr9-76810535-1 chr9 76810435 76810635 0 21.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) intron (NR_131751, intron 5 of 15) 46099 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr21-26841077-1 chr21 26840977 26841177 0 21.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_006988, exon 4 of 9) exon (NM_006988, exon 4 of 9) 4332 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding Merged-chr15-98304523-1 chr15 98304423 98304623 0 21.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 209859 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr1-172644068-1 chr1 172643968 172644168 0 21.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14940 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr13-75538077-2 chr13 75537931 75538223 0 21.150002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_203497) promoter-TSS (NM_203497) -205 NM_203495 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding Merged-chr1-171788861-2 chr1 171788751 171788972 0 21.150000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001007239, intron 4 of 7) intron (NM_001007239, intron 4 of 7) 7240 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr15-73697148-2 chr15 73697032 73697264 0 21.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001329628, intron 1 of 7) intron (NM_001329628, intron 1 of 7) 12417 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr15-100466236-1 chr15 100466136 100466336 0 21.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_178842, intron 11 of 12) X6A_LINE|LINE|CR1 78050 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding Merged-chr10-8443190-1 chr10 8443090 8443290 0 21.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L3|LINE|CR1 151201 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr21-41346340-1 chr21 41346240 41346440 0 21.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_206964, intron 4 of 6) intron (NM_206964, intron 4 of 6) -15683 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr4-24222291-1 chr4 24222191 24222391 0 21.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) intron (NM_001330751, intron 2 of 14) 250538 NM_001330751 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr12-69405657-2 chr12 69405525 69405789 0 20.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER44C|DNA|TcMar-Tigger 45947 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr20-1323047-2 chr20 1322938 1323157 0 20.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_037661, intron 2 of 9) MER102b|DNA|hAT-Charlie -2296 NR_040048 100507495 Hs.655785 NR_040047 ENSG00000234684 SDCBP2-AS1 -0 SDCBP2 antisense RNA 1 ncRNA Merged-chr1-172358949-1 chr1 172358849 172359049 0 20.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -61739 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr15-92012482-1 chr15 92012382 92012582 0 20.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 158182 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr21-41680750-1 chr21 41680650 41680850 0 20.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_024367, intron 1 of 2) L2b|LINE|L2 1448 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr12-69631525-1 chr12 69631425 69631625 0 20.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -20363 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr13-79481285-1 chr13 79481185 79481385 0 20.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_046685) promoter-TSS (NR_046685) -54 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 -0 NDFIP2 antisense RNA 1 ncRNA Merged-chr4-28444486-1 chr4 28444386 28444586 0 20.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -375096 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr5-1397945-1 chr5 1397845 1398045 0 20.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001044, intron 14 of 14).2 L1MEc|LINE|L1 -17872 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr5-1231447-1 chr5 1231347 1231547 0 20.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182632, intron 1 of 11) intron (NM_182632, intron 1 of 11) 6092 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr15-98952229-1 chr15 98952129 98952329 0 20.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 20 of 20) MLT1F|LTR|ERVL-MaLR 53427 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-91867849-2 chr15 91867722 91867977 0 20.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 13549 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-94984433-2 chr12 94984333 94984534 0 20.549999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001258338, intron 2 of 2) AluSx|SINE|Alu 19280 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr15-98889022-2 chr15 98888918 98889126 0 20.549999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) MLT1J|LTR|ERVL-MaLR 104596 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr9-84261270-2 chr9 84261170 84261370 0 20.400002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 79509 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr1-186168627-1 chr1 186168527 186168727 0 20.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 100 of 106) intron (NM_031935, intron 100 of 106) -127646 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr20-14633725-1 chr20 14633625 14633825 0 20.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 4 of 16) intron (NM_080676, intron 4 of 16) 79341 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA Merged-chr12-71064943-1 chr12 71064843 71065043 0 20.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 93056 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr12-69153213-1 chr12 69153113 69153313 0 20.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -86324 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr1-172538027-1 chr1 172537927 172538127 0 20.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282751, intron 1 of 21) intron (NM_001282751, intron 1 of 21) 4909 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr1-172322384-2 chr1 172322244 172322524 0 20.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001136127, intron 16 of 19) intron (NM_001136127, intron 16 of 19) -98304 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr15-91764190-1 chr15 91764090 91764290 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2B4|LTR|ERVL -89518 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr5-42123833-1 chr5 42123733 42123933 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic ERV3-16A3_I-int|LTR|ERVL 51512 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr12-95099198-1 chr12 95099098 95099298 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 14 of 20) L2b|LINE|L2 -25570 NM_001032287 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding Merged-chr1-186219570-1 chr1 186219470 186219670 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -76703 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr15-98514263-1 chr15 98514163 98514363 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182562, intron 1 of 6) intron (NM_182562, intron 1 of 6) 119 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr15-98331572-1 chr15 98331472 98331672 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Charlie4z|DNA|hAT-Charlie 182810 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr1-172518488-1 chr1 172518388 172518588 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13861 NM_016227 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr12-66130812-2 chr12 66130712 66130913 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_032338) promoter-TSS (NM_032338) -59 NM_032338 84298 Hs.504820 NM_032338 ENSG00000139233 LLPH C12orf31|hLLP LLP homolog, long-term synaptic facilitation protein-coding Merged-chr20-496626-2 chr20 496489 496763 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_177560, intron 5 of 11) intron (NM_177560, intron 5 of 11) -34073 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr12-65560789-1 chr12 65560689 65560889 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 4 of 4) intron (NR_120434, intron 4 of 4) -3478 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr12-69686034-1 chr12 69685934 69686134 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282616, intron 3 of 3) intron (NM_001282616, intron 3 of 3) 3243 NM_152439 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding Merged-chr12-83573843-2 chr12 83573741 83573946 0 20.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 886688 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr5-1255442-1 chr5 1255342 1255542 0 20.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_198253, intron 13 of 15) intron (NM_198253, intron 13 of 15) 30087 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr20-1417458-2 chr20 1417291 1417625 0 19.900002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -24286 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr15-90934478-2 chr15 90934359 90934598 0 19.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001323620) promoter-TSS (NM_001323620) -142 NM_001323619 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr12-70242874-2 chr12 70242757 70242991 0 19.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014515) promoter-TSS (NM_014515) -120 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr12-70661024-2 chr12 70660909 70661140 0 19.849998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_130846, exon 8 of 10) exon (NM_130846, exon 8 of 10) -23584 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr12-70889998-1 chr12 70889898 70890098 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) 30806 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr12-83183103-1 chr12 83183003 83183203 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1A0|LTR|ERVL-MaLR 495948 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr12-69725335-1 chr12 69725235 69725435 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_110072, exon 3 of 4) non-coding (NR_110072, exon 3 of 4) 13233 NR_110072 101928002 Hs.569096 NR_110072 ENSG00000247131 LOC101928002 -0 uncharacterized LOC101928002 ncRNA Merged-chr1-172356733-1 chr1 172356633 172356833 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -63955 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr10-10488953-1 chr10 10488853 10489053 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 26438 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr21-41030184-1 chr21 41030084 41030284 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA15|LINE|L1 117880 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Merged-chr15-98468844-1 chr15 98468744 98468944 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182562, intron 4 of 6) L1M4|LINE|L1 45538 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr12-83541587-1 chr12 83541487 83541687 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 854432 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr12-70648337-1 chr12 70648237 70648437 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073474, intron 9 of 10) intron (NR_073474, intron 9 of 10) -10897 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr12-70053118-1 chr12 70053018 70053218 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16A|LTR|ERVL -189876 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr10-10473515-1 chr10 10473415 10473615 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 11000 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr16-49720633-1 chr16 49720533 49720733 0 19.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015069, intron 3 of 7) intron (NM_015069, intron 3 of 7) -56402 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding Merged-chr12-65556859-2 chr12 65556734 65556985 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_135033, exon 2 of 3) non-coding (NR_135033, exon 2 of 3) 452 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr12-82177290-1 chr12 82177190 82177390 0 19.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 181130 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr1-185719203-2 chr1 185719070 185719336 0 19.650002 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -15348 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr12-57726223-2 chr12 57726116 57726330 0 19.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_027032) promoter-TSS (NR_027032) -17 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA Merged-chr4-28287965-2 chr4 28287863 28288067 0 19.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -531617 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-98853399-2 chr15 98853297 98853501 0 19.549999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 68973 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-91056007-2 chr15 91055892 91056122 0 19.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 33385 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 LOC101926911 -0 uncharacterized LOC101926911 ncRNA Merged-chr15-73683771-1 chr15 73683671 73683871 0 19.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025240) promoter-TSS (NM_025240) -510 NM_001329629 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr15-91807131-1 chr15 91807031 91807231 0 19.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -46577 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-172255087-1 chr1 172254987 172255187 0 19.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) intron (NM_015569, intron 15 of 20) -110252 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr2-157801364-1 chr2 157801264 157801464 0 19.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001347663, intron 2 of 10) Charlie7|DNA|hAT-Charlie 36914 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr12-69235038-1 chr12 69234938 69235138 0 19.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic FRAM|SINE|Alu -4499 NM_001300947 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr15-99153376-1 chr15 99153276 99153476 0 19.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_109947, intron 11 of 12) intron (NR_109947, intron 11 of 12) 48296 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr15-96553186-2 chr15 96553070 96553302 0 19.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F2|LTR|ERVL-MaLR 219846 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding Merged-chr5-1247640-1 chr5 1247540 1247740 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 22285 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr12-83699749-1 chr12 83699649 83699849 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 1012594 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr12-82139780-1 chr12 82139680 82139880 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 186061 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr12-57732400-1 chr12 57732300 57732500 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014770, intron 7 of 17) intron (NM_014770, intron 7 of 17) 5846 NM_001122772 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding Merged-chr5-41808340-1 chr5 41808240 41808440 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000436, intron 7 of 16) intron (NM_000436, intron 7 of 16) -61690 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 -0 OXCT1 antisense RNA 1 ncRNA Merged-chr15-95757035-1 chr15 95756935 95757135 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME3B|LINE|L1 323942 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr4-23877921-1 chr4 23877821 23878021 0 19.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 3371 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr1-172359178-1 chr1 172359078 172359278 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -61510 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr10-8183371-1 chr10 8183271 8183471 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 84934 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr12-69252100-1 chr12 69252000 69252200 0 19.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007007, intron 2 of 9) intron (NM_007007, intron 2 of 9) 12563 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr12-74509086-1 chr12 74508986 74509186 0 19.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA3|LINE|L1 -28685 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding Merged-chr12-69585861-2 chr12 69585753 69585969 0 19.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_001198842, exon 1 of 16) 5' UTR (NM_001198842, exon 1 of 16) 179 NM_001198842 10576 Hs.189772 NM_006431 ENSG00000166226 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1 subunit 2 protein-coding Merged-chr4-8199172-2 chr4 8199049 8199295 0 18.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001318480) promoter-TSS (NM_001318480) -72 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr20-1402386-2 chr20 1402282 1402490 0 18.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR3A|LTR|ERVK -9214 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr1-186680414-1 chr1 186680314 186680514 0 18.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125801) promoter-TSS (NR_125801) 13 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr15-73691571-1 chr15 73691471 73691671 0 18.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329628, intron 1 of 7) MLT1K|LTR|ERVL-MaLR 6840 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr20-1416170-2 chr20 1416065 1416276 0 18.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -22998 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr1-172660926-1 chr1 172660826 172661026 0 18.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000639, intron 2 of 3) intron (NM_000639, intron 2 of 3) 1918 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-98983577-2 chr15 98983471 98983684 0 18.750000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001167902, intron 2 of 4) intron (NM_001167902, intron 2 of 4) 22079 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr10-10591804-1 chr10 10591704 10591904 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 129289 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr20-1378266-1 chr20 1378166 1378366 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_040047, exon 3 of 3) non-coding (NR_040047, exon 3 of 3) 14695 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr1-172520784-1 chr1 172520684 172520884 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -11565 NM_016227 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr12-69815773-1 chr12 69815673 69815873 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_103519, exon 9 of 9) non-coding (NR_103519, exon 9 of 9) -9550 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr15-95773049-1 chr15 95772949 95773149 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 339956 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr12-82144726-1 chr12 82144626 82144826 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1H2|LTR|ERVL-MaLR 191007 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr12-65588129-1 chr12 65588029 65588229 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 2 of 4) intron (NR_120434, intron 2 of 4) -30818 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr1-186621082-1 chr1 186620982 186621182 0 18.700001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2F|LTR|ERVL 59345 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr15-98866657-2 chr15 98866528 98866786 0 18.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 82231 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr12-83537540-1 chr12 83537440 83537640 0 18.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 850385 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr15-91943240-1 chr15 91943140 91943340 0 18.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) L1MB2|LINE|L1 88940 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-92066992-1 chr15 92066892 92067092 0 18.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 212692 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr20-1467004-2 chr20 1466886 1467123 0 18.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_038164, exon 1 of 8) non-coding (NR_038164, exon 1 of 8) 688 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr6-113884222-1 chr6 113884122 113884322 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -10875 NR_038863 285758 Hs.359399 NR_038863 ENSG00000227502 LINC01268 -0 long intergenic non-protein coding RNA 1268 ncRNA Merged-chr12-83827630-1 chr12 83827530 83827730 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PB3|LINE|L1 1085199 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr12-69898021-1 chr12 69897921 69898121 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182530, intron 10 of 24) intron (NM_182530, intron 10 of 24) 72698 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr1-186193846-1 chr1 186193746 186193946 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -102427 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr6-113809917-1 chr6 113809817 113810017 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -47418 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding Merged-chr15-99157680-1 chr15 99157580 99157780 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001288616, intron 9 of 11) intron (NM_001288616, intron 9 of 11) 52600 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr9-84334908-1 chr9 84334808 84335008 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_022127, intron 2 of 18) intron (NM_022127, intron 2 of 18) 5871 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr5-1263197-1 chr5 1263097 1263297 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001193376, intron 10 of 14) intron (NM_001193376, intron 10 of 14) 31850 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding Merged-chr12-95165808-1 chr12 95165708 95165908 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018351, intron 3 of 20) AluJb|SINE|Alu 51656 NM_018351 55785 Hs.506381 NM_018351 ENSG00000180263 FGD6 ZFYVE24 FYVE, RhoGEF and PH domain containing 6 protein-coding Merged-chr10-10879496-1 chr10 10879396 10879596 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326325, intron 2 of 15) L3b|LINE|CR1 72667 NR_024410 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 -0 long intergenic non-protein coding RNA 710 ncRNA Merged-chr20-14406707-1 chr20 14406607 14406807 0 18.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 3 of 16) L2c|LINE|L2 -69040 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding Merged-chr5-923646-2 chr5 923528 923765 0 18.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 30792 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr1-172352031-1 chr1 172351931 172352131 0 18.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -68657 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr10-7827200-1 chr10 7827100 7827300 0 18.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 8696 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr12-84015162-1 chr12 84015062 84015262 0 18.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PB3|LINE|L1 897667 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr12-78532755-1 chr12 78532655 78532855 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -173009 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr12-78472877-1 chr12 78472777 78472977 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -113131 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr15-98933763-1 chr15 98933663 98933863 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 15 of 20) intron (NM_001291858, intron 15 of 20) 71893 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-98288277-1 chr15 98288177 98288377 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -199524 NR_120325 101927332 NR_120325 LINC01582 -0 long intergenic non-protein coding RNA 1582 ncRNA Merged-chr15-98305007-1 chr15 98304907 98305107 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 209375 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr15-95744280-1 chr15 95744180 95744380 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 311187 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr12-69443035-2 chr12 69442889 69443182 0 18.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F2|LTR|ERVL-MaLR -27314 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr13-74521718-1 chr13 74521618 74521818 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -31125 NR_034025 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 -0 long intergenic non-protein coding RNA 347 ncRNA Merged-chr5-1263872-1 chr5 1263772 1263972 0 18.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001193376, intron 10 of 14) intron (NM_001193376, intron 10 of 14) 31175 NM_198253 7015 Hs.492203 NM_198253 ENSG00000164362 TERT CMM9|DKCA2|DKCB4|EST2|PFBMFT1|TCS1|TP2|TRT|hEST2|hTRT telomerase reverse transcriptase protein-coding Merged-chr15-99076811-2 chr15 99076677 99076946 0 18.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -28269 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr1-171784951-1 chr1 171784851 171785051 0 17.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015935, intron 2 of 7) intron (NM_015935, intron 2 of 7) 3330 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr12-69738774-1 chr12 69738674 69738874 0 17.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022456) promoter-TSS (NM_022456) 88 NM_022456 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding Merged-chr1-172728189-1 chr1 172728089 172728289 0 17.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA15-16|LINE|L1 69181 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr12-69900803-1 chr12 69900703 69900903 0 17.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182530, intron 10 of 24) intron (NM_182530, intron 10 of 24) 75480 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr12-75378975-1 chr12 75378875 75379075 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001286548, intron 2 of 17) intron (NM_001286548, intron 2 of 17) 11947 NM_001286548 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding Merged-chr4-28102831-1 chr4 28102731 28102931 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -716751 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr12-83535603-1 chr12 83535503 83535703 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Arthur1|DNA|hAT-Tip100 848448 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr10-71860570-2 chr10 71860464 71860676 0 17.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -9195 NM_001042466 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding Merged-chr12-69705998-1 chr12 69705898 69706098 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -6582 NM_001282615 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding Merged-chr1-186651369-1 chr1 186651269 186651469 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 29058 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr12-75231477-1 chr12 75231377 75231577 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1M3a|LINE|L1 -21729 NM_001260497 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding Merged-chr1-172698783-1 chr1 172698683 172698883 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 39775 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr10-10905082-1 chr10 10904982 10905182 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326325, intron 2 of 15) MIRb|SINE|MIR 47081 NR_024410 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 -0 long intergenic non-protein coding RNA 710 ncRNA Merged-chr21-27269807-1 chr21 27269707 27269907 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -302687 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr15-92009691-1 chr15 92009591 92009791 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) MIRb|SINE|MIR 155391 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr16-56214233-1 chr16 56214133 56214333 0 17.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) intron (NM_020988, intron 2 of 8) -19708 NR_026889 26077 Hs.721567 NR_026889 ENSG00000261439 DKFZP434H168 -0 uncharacterized LOC26077 ncRNA Merged-chr10-10831315-2 chr10 10831177 10831453 0 17.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) intron (NM_001326326, intron 1 of 14) 32604 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr10-12220533-2 chr10 12220420 12220647 0 17.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006023, intron 6 of 12) intron (NM_006023, intron 6 of 12) -24389 NM_001321647 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding Merged-chr15-92105660-1 chr15 92105560 92105760 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 4 of 9) intron (NM_013272, intron 4 of 9) 251360 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-10554687-1 chr10 10554587 10554787 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) LTR33A_|LTR|ERVL 92172 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr4-11773975-1 chr4 11773875 11774075 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -345062 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding Merged-chr12-69966599-1 chr12 69966499 69966699 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 141276 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr1-171814897-1 chr1 171814797 171814997 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -26581 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr1-172703016-1 chr1 172702916 172703116 0 17.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 44008 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr1-186245559-1 chr1 186245459 186245659 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER51C|LTR|ERV1 -50714 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr1-172557143-1 chr1 172557043 172557243 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282751, intron 4 of 21) intron (NM_001282751, intron 4 of 21) 24025 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr4-24213630-1 chr4 24213530 24213730 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) intron (NM_001330751, intron 2 of 14) 259199 NM_001330751 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr1-172530304-1 chr1 172530204 172530404 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -2045 NM_016227 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr15-92073146-1 chr15 92073046 92073246 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) MIRb|SINE|MIR 218846 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-28648327-1 chr4 28648227 28648427 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -171255 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-84882207-1 chr15 84882107 84882307 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -2454 NM_001321721 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr15-91780754-1 chr15 91780654 91780854 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F2|LTR|ERVL-MaLR -72954 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-8384168-1 chr4 8384068 8384268 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001101667, intron 13 of 16) intron (NM_001101667, intron 13 of 16) 56557 NM_001101667 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 -0 acyl-CoA oxidase 3 pristanoyl protein-coding Merged-chr12-69688227-1 chr12 69688127 69688327 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282616, intron 3 of 3) intron (NM_001282616, intron 3 of 3) 1050 NM_152439 144453 Hs.280782 NM_032735 ENSG00000127325 BEST3 VMD2L3 bestrophin 3 protein-coding Merged-chr4-28489474-1 chr4 28489374 28489574 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 -330108 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr20-1375729-1 chr20 1375629 1375829 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_054014, intron 2 of 3) intron (NM_054014, intron 2 of 3) 17232 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr10-10538731-1 chr10 10538631 10538831 0 17.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 76216 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-91067260-2 chr15 91067132 91067389 0 17.450001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -32328 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding Merged-chr4-12633204-2 chr4 12633103 12633305 0 17.450001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 409753 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-84600955-2 chr9 84600827 84601084 0 17.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -67503 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr12-70756362-2 chr12 70756226 70756499 0 17.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 4 of 13) intron (NM_002849, intron 4 of 13) -1603 NM_001207016 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr15-92820472-2 chr15 92820369 92820576 0 17.349998 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 24988 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr13-88750837-1 chr13 88750737 88750937 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 123984 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr12-57738142-1 chr12 57738042 57738242 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001122772, exon 1 of 19) exon (NM_001122772, exon 1 of 19) 104 NM_001122772 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding Merged-chr15-91852809-1 chr15 91852709 91852909 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145044) promoter-TSS (NM_001145044) -899 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-8228730-1 chr4 8228630 8228830 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 10 of 14) intron (NR_134639, intron 10 of 14) 29486 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr12-94941653-1 chr12 94941553 94941753 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 62060 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr4-8378138-1 chr4 8378038 8378238 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001101667, intron 14 of 16) intron (NM_001101667, intron 14 of 16) 62587 NM_001101667 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 -0 acyl-CoA oxidase 3 pristanoyl protein-coding Merged-chr10-8306870-1 chr10 8306770 8306970 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -38565 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr12-70719996-1 chr12 70719896 70720096 0 17.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 34612 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr15-100519755-1 chr15 100519655 100519855 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001290341, intron 3 of 13) intron (NM_001290341, intron 3 of 13) 24531 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding Merged-chr15-98856737-1 chr15 98856637 98856837 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) L2b|LINE|L2 72311 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-95743514-1 chr15 95743414 95743614 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 310421 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr5-41764227-1 chr5 41764127 41764327 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000436, intron 13 of 16) MIRc|SINE|MIR -105803 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 -0 OXCT1 antisense RNA 1 ncRNA Merged-chr13-74177009-1 chr13 74176909 74177109 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -43080 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr15-98480653-1 chr15 98480553 98480753 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_182562, exon 4 of 7) exon (NM_182562, exon 4 of 7) 33729 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr21-41674019-1 chr21 41673919 41674119 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic BLACKJACK|DNA|hAT-Blackjack -5283 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr1-172523180-1 chr1 172523080 172523280 0 17.100000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HAL1|LINE|L1 -9169 NM_016227 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr20-1357994-2 chr20 1357837 1358151 0 17.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) L1MDa|LINE|L1 -28759 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr1-189619902-2 chr1 189619789 189620015 0 17.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 856108 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding Merged-chr10-8240620-1 chr10 8240520 8240720 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 27685 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr1-188444905-1 chr1 188444805 188445005 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 1001277 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr15-84828600-1 chr15 84828500 84828700 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020778, intron 3 of 13) intron (NM_020778, intron 3 of 13) 11920 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr15-92149372-1 chr15 92149272 92149472 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 8 of 9) intron (NM_013272, intron 8 of 9) -244515 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr15-99106639-1 chr15 99106539 99106739 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_145728, intron 1 of 3) intron (NM_145728, intron 1 of 3) 1559 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr16-56267559-1 chr16 56267459 56267659 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020988, intron 2 of 8) L2a|LINE|L2 22039 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 -0 microRNA 3935 ncRNA Merged-chr2-157876384-1 chr2 157876284 157876484 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001111067) promoter-TSS (NM_001111067) -522 NM_001347664 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr10-8721971-1 chr10 8721871 8722071 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -127580 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr9-80077241-1 chr9 80077141 80077341 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 102218 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr21-41006505-1 chr21 41006405 41006605 0 17.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 141559 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Merged-chr10-12195860-2 chr10 12195744 12195977 0 16.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006023) promoter-TSS (NM_006023) -102 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding Merged-chr12-57728713-1 chr12 57728613 57728813 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_027032) TTS (NR_027032) 2473 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA Merged-chr1-171133170-1 chr1 171133070 171133270 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA9|LINE|L1 -4570 NR_002601 388714 Hs.448988 NR_002601 ENSG00000117507 FMO6P FMO6 flavin containing monooxygenase 6 pseudogene pseudo Merged-chr12-66170031-1 chr12 66169931 66170131 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001282606) promoter-TSS (NM_001282606) 41 NM_001282610 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding Merged-chr1-172331386-1 chr1 172331286 172331486 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 17 of 20) intron (NM_015569, intron 17 of 20) -89302 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr10-9458828-1 chr10 9458728 9458928 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -163235 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr1-172607401-1 chr1 172607301 172607501 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282751, intron 20 of 21) L1ME3Cz|LINE|L1 -51607 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-98669072-1 chr15 98668972 98669172 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 1 of 20) intron (NM_001291858, intron 1 of 20) -17851 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA Merged-chr16-66508366-1 chr16 66508266 66508466 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_073520, exon 9 of 9) non-coding (NR_073520, exon 9 of 9) -31964 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA Merged-chr15-92121434-1 chr15 92121334 92121534 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 5 of 9) L2b|LINE|L2 267134 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-9579457-2 chr10 9579351 9579564 0 16.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -283864 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr15-91979088-1 chr15 91978988 91979188 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) MIRb|SINE|MIR 124788 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-172273886-1 chr1 172273786 172273986 0 16.799999 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) intron (NM_015569, intron 15 of 20) -129051 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr21-41615831-2 chr21 41615710 41615953 0 16.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L4_C_Mam|LINE|RTE-X -63471 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr15-91760331-1 chr15 91760231 91760431 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -93377 NM_001145044 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-189617036-2 chr1 189616922 189617150 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1A0|LTR|ERVL-MaLR 858974 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding Merged-chr10-8332499-1 chr10 8332399 8332599 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -64194 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr1-171824271-1 chr1 171824171 171824371 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -17207 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr1-172773889-1 chr1 172773789 172773989 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 114881 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-91984036-1 chr15 91983936 91984136 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 129736 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-98648132-1 chr15 98648032 98648232 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000875) promoter-TSS (NM_000875) -407 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding Merged-chr15-84892696-1 chr15 84892596 84892796 0 16.700001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321722, intron 5 of 18) intron (NM_001321722, intron 5 of 18) 8035 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr5-134904683-2 chr5 134904548 134904818 0 16.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_032151) promoter-TSS (NM_032151) -437 NM_032151 84105 Hs.710014 NM_032151 ENSG00000132570 PCBD2 DCOH2|DCOHM|PHS2 pterin-4 alpha-carbinolamine dehydratase 2 protein-coding Merged-chr5-1256016-1 chr5 1255916 1256116 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_198253, intron 13 of 15) AluJb|SINE|Alu 30661 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr12-75295672-1 chr12 75295572 75295772 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001286549, intron 5 of 10) L2a|LINE|L2 34384 NM_032606 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding Merged-chr5-41797820-1 chr5 41797720 41797920 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000436, intron 11 of 16) MER5A|DNA|hAT-Charlie -72210 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 -0 OXCT1 antisense RNA 1 ncRNA Merged-chr4-26779890-1 chr4 26779790 26779990 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 80354 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr1-172263150-1 chr1 172263050 172263250 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) intron (NM_015569, intron 15 of 20) -118315 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr21-41348779-1 chr21 41348679 41348879 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_206964, intron 6 of 6) intron (NM_206964, intron 6 of 6) -13244 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr1-188464096-1 chr1 188463996 188464196 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 1020468 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr21-40788285-1 chr21 40788185 40788385 0 16.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001389, intron 1 of 32) intron (NM_001389, intron 1 of 32) 58828 NM_001389 1826 Hs.397800 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding Merged-chr12-69510585-1 chr12 69510485 69510685 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278354, intron 2 of 9) intron (NM_001278354, intron 2 of 9) 40236 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr1-186605904-1 chr1 186605804 186606004 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1M1|LINE|L1 74523 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr13-75534382-1 chr13 75534282 75534482 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001287394, intron 1 of 2) intron (NM_001287394, intron 1 of 2) 3490 NM_001287392 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding Merged-chr1-171805875-1 chr1 171805775 171805975 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 24254 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr2-157848072-1 chr2 157847972 157848172 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001347664, intron 1 of 11) L1MC3|LINE|L1 -9794 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr15-73704972-1 chr15 73704872 73705072 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024736, intron 6 of 9) intron (NM_001024736, intron 6 of 9) 20241 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr3-196978879-1 chr3 196978779 196978979 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10008 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding Merged-chr4-8385328-1 chr4 8385228 8385428 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001101667, intron 13 of 16) intron (NM_001101667, intron 13 of 16) 55397 NM_001101667 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 -0 acyl-CoA oxidase 3 pristanoyl protein-coding Merged-chr21-41362474-1 chr21 41362374 41362574 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002463, intron 1 of 13) intron (NM_002463, intron 1 of 13) 451 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr1-188565636-1 chr1 188565536 188565736 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16A2|LTR|ERVL 1122008 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-69438565-1 chr12 69438465 69438665 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -31784 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr21-41061388-1 chr21 41061288 41061488 0 16.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER44B|DNA|TcMar-Tigger 86676 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Merged-chr13-73741272-1 chr13 73741172 73741372 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007249, intron 6 of 7) intron (NM_007249, intron 6 of 7) 177028 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 -0 long intergenic non-protein coding RNA 392 ncRNA Merged-chr4-28467547-1 chr4 28467447 28467647 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA9|LINE|L1 -352035 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr20-1327370-2 chr20 1327269 1327471 0 16.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) intron (NR_040047, intron 1 of 2) -1501 NM_001199784 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr21-27063037-1 chr21 27062937 27063137 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA16|LINE|L1 -95917 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chrM-9074-1 chrM 8974 9174 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 7403 NR_137295 Merged-chr12-69835118-1 chr12 69835018 69835218 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182530, intron 1 of 24) intron (NM_182530, intron 1 of 24) 9795 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr1-181937167-1 chr1 181937067 181937267 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 124545 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr16-49728396-1 chr16 49728296 49728496 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015069, intron 3 of 7) intron (NM_015069, intron 3 of 7) -64165 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding Merged-chr1-171107790-1 chr1 171107690 171107890 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001002294, exon 4 of 9) exon (NM_001002294, exon 4 of 9) -5984 NR_031627 100302178 NR_031627 ENSG00000221390 MIR1295A MIR1295|MIRN1295|hsa-mir-1295|hsa-mir-1295a|mir-1295a microRNA 1295a ncRNA Merged-chr15-92049883-1 chr15 92049783 92049983 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 195583 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-28498878-1 chr4 28498778 28498978 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTA-int|LTR|ERVL-MaLR -320704 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr5-1240905-1 chr5 1240805 1241005 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182632, intron 7 of 11) MLT1C|LTR|ERVL-MaLR 15550 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr12-69466759-1 chr12 69466659 69466859 0 16.200001 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -3590 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr9-80878763-2 chr9 80878636 80878890 0 16.150000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER58A|DNA|hAT-Charlie 810772 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr12-69494628-1 chr12 69494528 69494728 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278354, intron 2 of 9) MER20|DNA|hAT-Charlie 24279 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr15-84905038-1 chr15 84904938 84905138 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321722, intron 7 of 18) intron (NM_001321722, intron 7 of 18) 20377 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr15-73686636-1 chr15 73686536 73686736 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329628, intron 1 of 7) intron (NM_001329628, intron 1 of 7) 1905 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr4-23856329-2 chr4 23856154 23856505 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 24963 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr15-92009163-1 chr15 92009063 92009263 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 154863 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-9596677-2 chr10 9596552 9596802 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -301084 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr15-98890118-1 chr15 98890018 98890218 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 105692 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr4-28120615-1 chr4 28120515 28120715 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER1B|DNA|hAT-Charlie -698967 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr9-84318513-1 chr9 84318413 84318613 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022127, intron 2 of 18) intron (NM_022127, intron 2 of 18) 22266 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr1-189607359-1 chr1 189607259 189607459 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 868651 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding Merged-chr1-172623893-1 chr1 172623793 172623993 0 16.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2-1_AMi|LINE|L2 -35115 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-90869906-2 chr15 90869803 90870010 0 16.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002569, intron 1 of 15) intron (NM_002569, intron 1 of 15) 1314 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr13-65497454-2 chr13 65497315 65497593 0 15.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -368593 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr15-90949766-2 chr15 90949652 90949881 0 15.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001323619, intron 16 of 20) intron (NM_001323619, intron 16 of 20) -5110 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 -0 RCC1 domain containing 1 protein-coding Merged-chr1-172565718-1 chr1 172565618 172565818 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282751, intron 6 of 21) MER66-int|LTR|ERV1 32600 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr12-70662079-1 chr12 70661979 70662179 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 11 of 13) intron (NM_002849, intron 11 of 13) -24639 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr4-26780665-1 chr4 26780565 26780765 0 15.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 79579 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr12-69414142-1 chr12 69414042 69414242 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 54432 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr12-82164794-1 chr12 82164694 82164894 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 193626 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr4-23957173-1 chr4 23957073 23957273 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) L2b|LINE|L2 -67096 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr13-79485186-2 chr13 79485085 79485287 0 15.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_019080, intron 1 of 7) intron (NM_019080, intron 1 of 7) -3955 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 -0 NDFIP2 antisense RNA 1 ncRNA Merged-chr12-70733634-1 chr12 70733534 70733734 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 20974 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr10-10533603-1 chr10 10533503 10533703 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) MIRb|SINE|MIR 71088 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr10-10807880-1 chr10 10807780 10807980 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) MER31-int|LTR|ERV1 9169 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-99132989-1 chr15 99132889 99133089 0 15.800000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_015286, exon 5 of 5) exon (NM_015286, exon 5 of 5) 27909 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr12-65609431-2 chr12 65609296 65609566 0 15.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 2 of 4) CR1-13_AMi|LINE|CR1 32941 NR_120433 100507065 Hs.591038 NR_120431 LOC100507065 -0 uncharacterized LOC100507065 ncRNA Merged-chr4-8185491-2 chr4 8185346 8185636 0 15.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13753 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr4-8177058-1 chr4 8176958 8177158 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -18226 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 -0 actin binding LIM protein family member 2 protein-coding Merged-chr1-171226971-1 chr1 171226871 171227071 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -21500 NM_002021 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 -0 flavin containing monooxygenase 1 protein-coding Merged-chr12-78580029-1 chr12 78579929 78580129 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -220283 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr15-84878876-1 chr15 84878776 84878976 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -5785 NM_001321721 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr1-186291910-1 chr1 186291810 186292010 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4363 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr12-70278785-1 chr12 70278685 70278885 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001199303, intron 2 of 15) intron (NM_001199303, intron 2 of 15) 35071 NR_037615 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr1-171879872-1 chr1 171879772 171879972 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) LTR67B|LTR|ERVL 15680 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr16-49721298-1 chr16 49721198 49721398 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015069, intron 3 of 7) intron (NM_015069, intron 3 of 7) -57067 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding Merged-chr9-84297362-1 chr9 84297262 84297462 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022127, intron 8 of 18) intron (NM_022127, intron 8 of 18) 43417 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr15-90873033-1 chr15 90872933 90873133 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001289824, exon 1 of 16) 5' UTR (NM_001289824, exon 1 of 16) 155 NM_001289824 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr20-1458462-1 chr20 1458362 1458562 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_038164, intron 1 of 7) intron (NR_038164, intron 1 of 7) 9230 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr12-91277110-1 chr12 91277010 91277210 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -93986 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding Merged-chr15-91966116-2 chr15 91966005 91966228 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 111816 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-92028000-1 chr15 92027900 92028100 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 173700 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-171801529-1 chr1 171801429 171801629 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 19908 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr4-28648841-1 chr4 28648741 28648941 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA14|LINE|L1 -170741 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-90930163-1 chr15 90930063 90930263 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001039675) promoter-TSS (NM_001039675) -17 NM_001039675 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr10-8313047-1 chr10 8312947 8313147 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -44742 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr13-74203845-1 chr13 74203745 74203945 0 15.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -27599 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr10-8279630-1 chr10 8279530 8279730 0 15.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -11325 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr20-1418482-2 chr20 1418284 1418680 0 15.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1K|LTR|ERVL-MaLR -25310 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr5-41925250-2 chr5 41925145 41925355 0 15.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_033484) promoter-TSS (NM_033484) -2 NM_001297437 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr13-74564721-1 chr13 74564621 74564821 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC5a|LINE|L1 11878 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 -0 long intergenic non-protein coding RNA 347 ncRNA Merged-chr1-194979381-1 chr1 194979281 194979481 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA15|LINE|L1 1603100 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 -0 microRNA 4735 ncRNA Merged-chr15-92020567-1 chr15 92020467 92020667 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 166267 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-94983735-1 chr12 94983635 94983835 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001258338, intron 2 of 2) L2|LINE|L2 19978 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr15-98903784-1 chr15 98903684 98903884 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 5 of 20) L1ME1|LINE|L1 101872 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-73689356-1 chr15 73689256 73689456 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329628, intron 1 of 7) intron (NM_001329628, intron 1 of 7) 4625 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr1-172713256-1 chr1 172713156 172713356 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 54248 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-91992222-1 chr15 91992122 91992322 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 137922 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr21-41659329-1 chr21 41659229 41659429 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19973 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr13-74547645-1 chr13 74547545 74547745 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJr|SINE|Alu -5198 NR_034025 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 -0 long intergenic non-protein coding RNA 347 ncRNA Merged-chr15-84862382-1 chr15 84862282 84862482 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020778, intron 9 of 13) intron (NM_020778, intron 9 of 13) -22279 NM_001321721 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr1-172496810-1 chr1 172496710 172496910 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -35539 NM_016227 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr1-186716074-1 chr1 186715974 186716174 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 35420 NR_125801 103752588 Hs.441636 NR_125801 ENSG00000273129 PACERR PACER|PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA ncRNA Merged-chr20-1342077-1 chr20 1341977 1342177 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) intron (NR_040047, intron 1 of 2) -12842 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr15-98609659-1 chr15 98609559 98609759 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER5B|DNA|hAT-Charlie -38880 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding Merged-chr12-70243385-1 chr12 70243285 70243485 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120460) promoter-TSS (NR_120460) -25 NR_120460 101928062 Hs.568059 NR_120459 ENSG00000257815 LINC01481 -0 long intergenic non-protein coding RNA 1481 ncRNA Merged-chr1-172643191-1 chr1 172643091 172643291 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15817 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr12-75387804-1 chr12 75387704 75387904 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001286548, intron 2 of 17) MSTC|LTR|ERVL-MaLR 3118 NM_001286548 84698 Hs.733835 NM_032606 ENSG00000180881 CAPS2 UG0636c06 calcyphosine 2 protein-coding Merged-chr20-1391956-1 chr20 1391856 1392056 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_106929) TTS (NR_106929) 1005 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr1-186572506-1 chr1 186572406 186572606 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 107921 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr1-186578636-1 chr1 186578536 186578736 0 15.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 101791 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr20-472372-1 chr20 472272 472472 0 15.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HERVK22-int|LTR|ERVK -9819 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr10-71851303-1 chr10 71851203 71851403 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002778) promoter-TSS (NM_002778) 72 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding Merged-chr12-82161534-1 chr12 82161434 82161634 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 196886 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr21-41002534-1 chr21 41002434 41002634 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MCa|LINE|L1 145530 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Merged-chr10-7872157-1 chr10 7872057 7872257 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 53653 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr21-41662846-1 chr21 41662746 41662946 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -16456 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr6-46719176-1 chr6 46719076 46719276 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005084, intron 2 of 11) intron (NM_005084, intron 2 of 11) 16238 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding Merged-chr15-92076870-2 chr15 92076702 92077038 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 222570 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-65830084-1 chr12 65829984 65830184 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330190, intron 2 of 3) intron (NM_001330190, intron 2 of 3) -3110 NR_026825 204010 Hs.558686 NR_026825 ENSG00000241749 RPSAP52 RPSA_17_1251 ribosomal protein SA pseudogene 52 pseudo Merged-chr9-84231116-1 chr9 84231016 84231216 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT2F|LTR|ERVL 109663 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr1-171742347-1 chr1 171742247 171742447 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001185127) promoter-TSS (NM_001185127) -108 NM_003762 8674 Hs.6651 NM_003762 ENSG00000117533 VAMP4 VAMP-4|VAMP24 vesicle associated membrane protein 4 protein-coding Merged-chr12-70774186-1 chr12 70774086 70774286 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) 14744 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr12-69481980-1 chr12 69481880 69482080 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001042555, intron 2 of 9) intron (NM_001042555, intron 2 of 9) 11631 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr15-92188208-1 chr15 92188108 92188308 0 14.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -205679 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr10-8616935-1 chr10 8616835 8617035 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MARNA|DNA|TcMar-Mariner -22544 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr2-157848559-1 chr2 157848459 157848659 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001347664, intron 1 of 11) MLT1G3|LTR|ERVL-MaLR -10281 NM_001347667 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding Merged-chr15-92057514-1 chr15 92057414 92057614 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 203214 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr20-14457191-1 chr20 14457091 14457291 0 14.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 3 of 16) intron (NM_080676, intron 3 of 16) -97193 NR_104193 140848 Hs.570367 NR_104193 ENSG00000227927 MACROD2-IT1 C20orf68|NCRNA00227|bA467D7.4 MACROD2 intronic transcript 1 ncRNA Merged-chr21-27246930-2 chr21 27246795 27247065 0 14.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER44C|DNA|TcMar-Tigger -279810 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr1-186482845-1 chr1 186482745 186482945 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -21737 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr1-171779250-1 chr1 171779150 171779350 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2371 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr9-84300211-1 chr9 84300111 84300311 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022127, intron 6 of 18) intron (NM_022127, intron 6 of 18) 40568 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr12-69845584-1 chr12 69845484 69845684 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182530, intron 1 of 24) L1M5|LINE|L1 20261 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr21-27248947-1 chr21 27248847 27249047 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -281827 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr12-70661727-1 chr12 70661627 70661827 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 11 of 13) intron (NM_002849, intron 11 of 13) -24287 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr9-84221745-1 chr9 84221645 84221845 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 119034 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr15-92032756-1 chr15 92032656 92032856 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 178456 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-96560482-1 chr15 96560382 96560582 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 221172 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 -0 SPATA8 antisense RNA 1 (head to head) ncRNA Merged-chr12-69421652-1 chr12 69421552 69421752 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -48697 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr15-92111179-1 chr15 92111079 92111279 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 4 of 9) (CTCATGC)n|Simple_repeat|Simple_repeat 256879 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr9-76761616-1 chr9 76761516 76761716 0 14.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) intron (NR_131751, intron 5 of 15) -2820 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr15-99372040-1 chr15 99371940 99372140 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321675, intron 9 of 9) intron (NM_001321675, intron 9 of 9) 114515 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr4-8607764-1 chr4 8607664 8607864 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003652, intron 6 of 9) intron (NM_003652, intron 6 of 9) 15104 NM_003652 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ -0 carboxypeptidase Z protein-coding Merged-chr1-172665516-1 chr1 172665416 172665616 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000639, intron 3 of 3) intron (NM_000639, intron 3 of 3) 6508 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr6-46776348-1 chr6 46776248 46776448 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Charlie4a|DNA|hAT-Charlie -17009 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding Merged-chr15-92010838-1 chr15 92010738 92010938 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) L2a|LINE|L2 156538 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-186227821-1 chr1 186227721 186227921 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER41A|LTR|ERV1 -68452 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr15-90935209-2 chr15 90935077 90935341 0 14.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_001039675, exon 4 of 23) 5' UTR (NM_001039675, exon 4 of 23) 323 NM_018671 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr15-98897758-1 chr15 98897658 98897858 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 4 of 20) intron (NM_001291858, intron 4 of 20) 107898 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr1-186618585-1 chr1 186618485 186618685 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 61842 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr13-73137019-1 chr13 73136919 73137119 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 78227 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding Merged-chr13-74187749-1 chr13 74187649 74187849 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -43695 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr15-92090631-1 chr15 92090531 92090731 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 236331 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr9-84110329-1 chr9 84110229 84110429 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 46886 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr1-172742568-1 chr1 172742468 172742668 0 14.500000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 83560 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-99014914-2 chr15 99014814 99015015 0 14.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_126487, intron 1 of 3) CpG 210 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 -0 leukemia-associated non-coding IGF1R activator RNA 1 ncRNA Merged-chr4-8221755-2 chr4 8221619 8221892 0 14.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_134639, intron 7 of 14) L1MC4|LINE|L1 22511 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr9-84584048-2 chr9 84583930 84584167 0 14.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -84410 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr1-171869340-1 chr1 171869240 171869440 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) intron (NM_015569, intron 1 of 20) 5148 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr6-46285446-1 chr6 46285346 46285546 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125838, intron 1 of 3) MER5A|DNA|hAT-Charlie 9122 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr4-23913913-1 chr4 23913813 23914013 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) L2c|LINE|L2 -23836 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr12-70272816-1 chr12 70272716 70272916 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_037615, intron 1 of 16) L2|LINE|L2 29102 NR_037615 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr1-172562866-1 chr1 172562766 172562966 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282751, intron 6 of 21) MSTA|LTR|ERVL-MaLR 29748 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr12-70647001-1 chr12 70646901 70647101 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073474, intron 9 of 10) intron (NR_073474, intron 9 of 10) -9561 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr15-98971794-1 chr15 98971694 98971894 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001167902, intron 2 of 4) L1MA4|LINE|L1 33862 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-98734593-1 chr15 98734493 98734693 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -49833 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr12-71046434-1 chr12 71046334 71046534 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 111565 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr15-98866215-1 chr15 98866115 98866315 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 81789 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr12-69580904-1 chr12 69580804 69581004 0 14.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1H|LTR|ERVL-MaLR -3819 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA Merged-chr12-65851970-1 chr12 65851870 65852070 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001292024, intron 2 of 2) MIRc|SINE|MIR -24996 NR_026825 204010 Hs.558686 NR_026825 ENSG00000241749 RPSAP52 RPSA_17_1251 ribosomal protein SA pseudogene 52 pseudo Merged-chr4-28125294-1 chr4 28125194 28125394 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PB4|LINE|L1 -694288 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-99279432-1 chr15 99279332 99279532 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321675, intron 3 of 9) L1M4|LINE|L1 21907 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr5-932845-1 chr5 932745 932945 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 39991 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr15-98977954-1 chr15 98977854 98978054 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001167902, intron 2 of 4) intron (NM_001167902, intron 2 of 4) 27702 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr15-98578930-1 chr15 98578830 98579030 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluJo|SINE|Alu -64548 NM_182562 283777 Hs.668070 NM_182562 ENSG00000185087 FAM169B -0 family with sequence similarity 169 member B protein-coding Merged-chr1-171985849-1 chr1 171985749 171985949 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) intron (NM_015569, intron 2 of 20) 121657 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr13-81358408-1 chr13 81358308 81358508 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -131425 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 -0 long intergenic non-protein coding RNA 564 ncRNA Merged-chr12-65576998-1 chr12 65576898 65577098 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120434, intron 3 of 4) L1ME1|LINE|L1 -19687 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr12-69758004-1 chr12 69757904 69758104 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_103520, intron 3 of 8) intron (NR_103520, intron 3 of 8) 18614 NR_103520 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding Merged-chr4-26782401-1 chr4 26782301 26782501 0 14.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR52|LTR|ERVL 77843 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr15-99100740-2 chr15 99100631 99100849 0 14.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -4340 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr12-69240350-1 chr12 69240250 69240450 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_007007, intron 1 of 9) intron (NM_007007, intron 1 of 9) 813 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding Merged-chr1-181898947-1 chr1 181898847 181899047 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L3b|LINE|CR1 162765 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr4-12555107-1 chr4 12555007 12555207 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 331656 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr10-3238703-1 chr10 3238603 3238803 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -65862 NR_144639 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding Merged-chr1-178324430-1 chr1 178324330 178324530 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_170692, intron 3 of 17) AluJr|SINE|Alu -17041 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding Merged-chr15-98883455-1 chr15 98883355 98883555 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 99029 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr4-8378918-1 chr4 8378818 8379018 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001101667, intron 14 of 16) intron (NM_001101667, intron 14 of 16) 61807 NM_001101667 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 -0 acyl-CoA oxidase 3 pristanoyl protein-coding Merged-chr10-10617237-1 chr10 10617137 10617337 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 154722 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr1-172002950-1 chr1 172002850 172003050 0 14.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 4 of 20) intron (NM_015569, intron 4 of 20) -135858 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr12-69987871-2 chr12 69987744 69987998 0 13.950001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 162548 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr15-92062896-1 chr15 92062796 92062996 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 208596 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr5-1395517-1 chr5 1395417 1395617 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001044, intron 14 of 14).2 intron (NM_001044, intron 14 of 14).2 -15444 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr12-69642619-1 chr12 69642519 69642719 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_001282614) TTS (NM_001282614) -31457 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr1-172040701-1 chr1 172040601 172040801 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 7 of 20) L2c|LINE|L2 -98107 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr1-188569622-1 chr1 188569522 188569722 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MB7|LINE|L1 1125994 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr5-1413635-1 chr5 1413535 1413735 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001044, intron 8 of 14).2 intron (NM_001044, intron 8 of 14).2 31793 NM_001044 6531 Hs.406 NM_001044 ENSG00000142319 SLC6A3 DAT|DAT1|PKDYS solute carrier family 6 member 3 protein-coding Merged-chr4-28686840-1 chr4 28686740 28686940 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Charlie17b|DNA|hAT-Charlie -132742 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr6-46673706-1 chr6 46673606 46673806 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001204051, intron 8 of 8) L2c|LINE|L2 -6562 NR_144468 221400 Hs.656983 NM_001010870 ENSG00000180113 TDRD6 CT41.2|NY-CO-45|SPATA36|TDR2|bA446F17.4 tudor domain containing 6 protein-coding Merged-chr10-8461616-1 chr10 8461516 8461716 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 132775 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr12-75444608-1 chr12 75444508 75444708 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16B1|LTR|ERVL -36125 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding Merged-chr3-196990061-1 chr3 196989961 196990161 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -12845 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA Merged-chr5-42170877-1 chr5 42170777 42170977 0 13.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_104635, intron 1 of 3) intron (NR_104635, intron 1 of 3) 4468 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr4-26765794-1 chr4 26765694 26765894 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 94450 NR_134675 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr21-41667042-1 chr21 41666942 41667142 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -12260 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr21-26868317-1 chr21 26868217 26868417 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT2B4|LTR|ERVL -22908 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding Merged-chr12-70620065-1 chr12 70619965 70620165 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330204, intron 3 of 32) intron (NM_001330204, intron 3 of 32) -10041 NM_001206972 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr12-91259427-1 chr12 91259327 91259527 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16B1|LTR|ERVL -76303 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding Merged-chr15-99371297-1 chr15 99371197 99371397 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321675, intron 9 of 9) intron (NM_001321675, intron 9 of 9) 113772 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr6-46279800-1 chr6 46279700 46279900 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125838, intron 1 of 3) MIRb|SINE|MIR 3476 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr10-3313917-1 chr10 3313817 3314017 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MD3|LINE|L1 -4778 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr6-46731209-1 chr6 46731109 46731309 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001168357, intron 1 of 11) intron (NM_001168357, intron 1 of 11) 4205 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding Merged-chr15-90836490-1 chr15 90836390 90836590 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -32102 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr15-90711492-1 chr15 90711392 90711592 0 13.700000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120372, intron 2 of 3) intron (NR_120372, intron 2 of 3) 5648 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 -0 CRTC3 antisense RNA 1 ncRNA Merged-chr15-73674598-1 chr15 73674498 73674698 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 -9683 NM_001329629 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr1-186519310-1 chr1 186519210 186519410 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic ERV24B_Prim-int|LTR|ERV1 -58202 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr13-69379920-1 chr13 69379820 69380020 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA3|LINE|L1 157574 NR_125752 103689913 Hs.585628 NR_125752 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA Merged-chr10-10637708-1 chr10 10637608 10637808 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 157206 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chrM-6936-1 chrM 6836 7036 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 5265 NR_137295 Merged-chr10-8328190-1 chr10 8328090 8328290 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MamRTE1|LINE|RTE-BovB -59885 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr13-90352807-1 chr13 90352707 90352907 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 121625 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr10-10644262-1 chr10 10644162 10644362 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 150652 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr4-8215275-1 chr4 8215175 8215375 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_134639, intron 4 of 14) intron (NR_134639, intron 4 of 14) 16031 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr5-41962083-1 chr5 41961983 41962183 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 36829 NM_033484 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr10-10519653-1 chr10 10519553 10519753 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 57138 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr6-46677652-1 chr6 46677552 46677752 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_001204051, exon 9 of 9) 3' UTR (NM_001204051, exon 9 of 9) -2616 NR_144468 221400 Hs.656983 NM_001010870 ENSG00000180113 TDRD6 CT41.2|NY-CO-45|SPATA36|TDR2|bA446F17.4 tudor domain containing 6 protein-coding Merged-chr12-69447604-1 chr12 69447504 69447704 0 13.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -22745 NM_001278354 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr15-85047333-1 chr15 85047233 85047433 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 65359 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr9-84589577-1 chr9 84589477 84589677 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -78881 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr15-98891230-1 chr15 98891130 98891330 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 106804 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr9-83442873-1 chr9 83442773 83442973 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 24869 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr15-85047729-1 chr15 85047629 85047829 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) MamSINE1|SINE|tRNA-RTE 65755 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr16-48584155-1 chr16 48584055 48584255 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153029, intron 1 of 6) LTR37-int|LTR|ERV1 26054 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 -0 NEDD4 binding protein 1 protein-coding Merged-chr13-75935125-1 chr13 75935025 75935225 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 58239 NR_126373 104326189 Hs.671216 NR_126373 ENSG00000223458 LMO7DN-IT1 C13orf45-IT1|TCONS_00021569 LMO7DN intronic transcript 1 ncRNA Merged-chr12-70744397-1 chr12 70744297 70744497 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 10211 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr1-181950767-1 chr1 181950667 181950867 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MEg|LINE|L1 110945 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr6-46686884-1 chr6 46686784 46686984 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001168359) promoter-TSS (NM_001168359) 949 NR_134644 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 -0 uncharacterized LOC101926934 ncRNA Merged-chr10-7953735-1 chr10 7953635 7953835 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) L2c|LINE|L2 98756 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr10-3262232-1 chr10 3262132 3262332 0 13.400000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR -56463 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr12-70683739-1 chr12 70683639 70683839 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_073474, intron 5 of 10) L2a|LINE|L2 -46299 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr10-10663829-1 chr10 10663729 10663929 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 131085 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr5-39840700-1 chr5 39840600 39840800 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1C|LTR|ERVL-MaLR -211591 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 -0 long intergenic non-protein coding RNA 603 ncRNA Merged-chr21-26536352-1 chr21 26536252 26536452 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_135515, intron 2 of 3) intron (NR_135515, intron 2 of 3) 37052 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding Merged-chr12-70271057-1 chr12 70270957 70271157 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_037615, intron 1 of 16) MLT1L|LTR|ERVL-MaLR 27343 NR_037615 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr4-28710139-1 chr4 28710039 28710239 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -109443 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-98749552-1 chr15 98749452 98749652 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -34874 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr1-181936143-1 chr1 181936043 181936243 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 125569 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr1-171819579-1 chr1 171819479 171819679 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -21899 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr1-186485476-1 chr1 186485376 186485576 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -24368 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr12-69609950-1 chr12 69609850 69610050 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_201550, exon 1 of 1) 3' UTR (NM_201550, exon 1 of 1) 1212 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr20-1323452-1 chr20 1323352 1323552 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_037661, intron 2 of 9) intron (NR_037661, intron 2 of 9) -1891 NR_040048 100507495 Hs.655785 NR_040047 ENSG00000234684 SDCBP2-AS1 -0 SDCBP2 antisense RNA 1 ncRNA Merged-chr9-84585307-1 chr9 84585207 84585407 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -83151 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr13-90357449-1 chr13 90357349 90357549 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 126267 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr1-189589203-1 chr1 189589103 189589303 0 13.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 886807 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding Merged-chr15-99088038-1 chr15 99087938 99088138 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -17042 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr10-12190989-1 chr10 12190889 12191089 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321647, intron 1 of 8) intron (NM_001321647, intron 1 of 8) -4973 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding Merged-chr9-76654875-1 chr9 76654775 76654975 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330680, intron 2 of 10) intron (NM_001330680, intron 2 of 10) 37540 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr9-83334490-1 chr9 83334390 83334590 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 6 of 13) intron (NM_174938, intron 6 of 13) -2529 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr12-69583724-1 chr12 69583624 69583824 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_037476) promoter-TSS (NR_037476) -999 NR_037476 100500868 NR_037476 ENSG00000283677 MIR3913-2 mir-3913-2 microRNA 3913-2 ncRNA Merged-chr20-1444510-1 chr20 1444410 1444610 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038164, intron 7 of 7) intron (NR_038164, intron 7 of 7) 23182 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr21-41612894-1 chr21 41612794 41612994 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -66408 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr10-8246476-1 chr10 8246376 8246576 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR 21829 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr15-91930359-1 chr15 91930259 91930459 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 76059 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-171245561-1 chr1 171245461 171245661 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1I|LTR|ERVL-MaLR -2910 NM_002021 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 -0 flavin containing monooxygenase 1 protein-coding Merged-chr1-172559533-1 chr1 172559433 172559633 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282751, intron 6 of 21) MER66B|LTR|ERV1 26415 NM_001282750 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding Merged-chr15-92696677-1 chr15 92696577 92696777 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR -40876 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr1-171867098-1 chr1 171866998 171867198 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) intron (NM_015569, intron 1 of 20) 2906 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr15-95579822-1 chr15 95579722 95579922 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 146729 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr1-186531941-1 chr1 186531841 186532041 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA11|LINE|L1 -70833 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr12-69794204-1 chr12 69794104 69794304 0 13.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278402, intron 2 of 8) intron (NM_001278402, intron 2 of 8) 15252 NM_001024647 117177 Hs.258209 NM_022456 ENSG00000127328 RAB3IP RABIN3|RABIN8 RAB3A interacting protein protein-coding Merged-chr21-25935034-2 chr21 25934914 25935154 0 13.050000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001136131, intron 11 of 15) intron (NM_001136131, intron 11 of 15) -199380 NM_001685 522 Hs.246310 NM_001685 ENSG00000154723 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 protein-coding Merged-chr15-92099057-1 chr15 92098957 92099157 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 3 of 9) intron (NM_013272, intron 3 of 9) 244757 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-10808484-1 chr10 10808384 10808584 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) MER31-int|LTR|ERV1 9773 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr1-186126933-1 chr1 186126833 186127033 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 82 of 106) L2a|LINE|L2 -169340 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr10-10875576-1 chr10 10875476 10875676 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326325, intron 2 of 15) intron (NM_001326325, intron 2 of 15) 76587 NR_024410 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 -0 long intergenic non-protein coding RNA 710 ncRNA Merged-chr13-75583212-1 chr13 75583112 75583312 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006002, intron 6 of 8) intron (NM_006002, intron 6 of 8) 33462 NM_006002 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding Merged-chr15-92124132-1 chr15 92124032 92124232 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 5 of 9) intron (NM_013272, intron 5 of 9) -269755 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr1-186626740-1 chr1 186626640 186626840 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 53687 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr16-62948239-1 chr16 62948139 62948339 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -911404 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding Merged-chr1-172392386-1 chr1 172392286 172392486 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 20 of 20) intron (NM_015569, intron 20 of 20) -28302 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr13-75536527-1 chr13 75536427 75536627 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001287394, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 1345 NM_001287392 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding Merged-chr13-79478023-1 chr13 79477923 79478123 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_046685, intron 2 of 2) ERV3-16A3_LTR|LTR|ERVL -3101 NM_001161407 54602 Hs.525093 NM_019080 ENSG00000102471 NDFIP2 N4WBP5A Nedd4 family interacting protein 2 protein-coding Merged-chr4-28673887-1 chr4 28673787 28673987 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -145695 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr1-194969729-1 chr1 194969629 194969829 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 1612752 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 -0 microRNA 4735 ncRNA Merged-chr9-83430023-1 chr9 83429923 83430123 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 37719 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr15-84836123-1 chr15 84836023 84836223 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020778, intron 3 of 13) L2a|LINE|L2 19443 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr15-92095396-1 chr15 92095296 92095496 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 3 of 9) intron (NM_013272, intron 3 of 9) 241096 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr6-46675900-1 chr6 46675800 46676000 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001204051, intron 8 of 8) MamRep605|LTR?|LTR? -4368 NR_144468 221400 Hs.656983 NM_001010870 ENSG00000180113 TDRD6 CT41.2|NY-CO-45|SPATA36|TDR2|bA446F17.4 tudor domain containing 6 protein-coding Merged-chr13-74176122-1 chr13 74176022 74176222 0 12.900000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -42193 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr12-66145190-2 chr12 66145018 66145362 0 12.850000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_016056, intron 5 of 6) intron (NM_016056, intron 5 of 6) -14437 NM_032338 84298 Hs.504820 NM_032338 ENSG00000139233 LLPH C12orf31|hLLP LLP homolog, long-term synaptic facilitation protein-coding Merged-chr5-1402097-1 chr5 1401997 1402197 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001044, intron 13 of 14).2 intron (NM_001044, intron 13 of 14).2 -22024 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr15-85024819-1 chr15 85024719 85024919 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 42845 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr13-88810195-1 chr13 88810095 88810295 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 183342 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr15-92123870-1 chr15 92123770 92123970 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 5 of 9) intron (NM_013272, intron 5 of 9) 269570 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr21-27219281-1 chr21 27219181 27219381 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -252161 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr12-69387105-1 chr12 69387005 69387205 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006530, intron 6 of 6) MER44A|DNA|TcMar-Tigger 27395 NM_006530 8089 Hs.4029 NM_006530 ENSG00000127337 YEATS4 4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9 YEATS domain containing 4 protein-coding Merged-chr6-45946650-1 chr6 45946550 45946750 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001256023, intron 3 of 5) intron (NM_001256023, intron 3 of 5) -9053 NR_045673 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding Merged-chr4-11904229-1 chr4 11904129 11904329 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR -319222 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr20-1374495-1 chr20 1374395 1374595 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_040048, exon 3 of 4) non-coding (NR_040048, exon 3 of 4) 18466 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr9-76850497-1 chr9 76850397 76850597 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001308047, exon 3 of 18) exon (NM_001308047, exon 3 of 18) 55590 NM_015225 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr9-84230471-1 chr9 84230371 84230571 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 110308 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr5-134875361-1 chr5 134875261 134875461 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024715, intron 1 of 4) intron (NM_024715, intron 1 of 4) 1591 NM_024715 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding Merged-chr12-70837459-1 chr12 70837359 70837559 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) MER21B|LTR|ERVL -48529 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr12-78556330-1 chr12 78556230 78556430 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -196584 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr9-76782813-1 chr9 76782713 76782913 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_132312, exon 2 of 4) non-coding (NR_132312, exon 2 of 4) 18377 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr1-188667022-1 chr1 188666922 188667122 0 12.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HERV4_I-int|LTR|ERV1 1223394 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-71045892-2 chr12 71045743 71046041 0 12.650000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 112107 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr4-28212180-1 chr4 28212080 28212280 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTA1|LTR|ERVL-MaLR -607402 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr12-70094594-1 chr12 70094494 70094694 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -148400 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr10-8300892-1 chr10 8300792 8300992 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -32587 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr1-188665708-1 chr1 188665608 188665808 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 1222080 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr13-103965812-1 chr13 103965712 103965912 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 540612 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA Merged-chr12-70285687-1 chr12 70285587 70285787 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001199303, intron 2 of 15) HAL1M8|LINE|L1 41973 NR_037615 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr1-188066134-1 chr1 188066034 188066234 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1M4c|LINE|L1 622506 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr1-186683779-1 chr1 186683679 186683879 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 3125 NR_125801 103752588 Hs.441636 NR_125801 ENSG00000273129 PACERR PACER|PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA ncRNA Merged-chr12-70131219-1 chr12 70131119 70131319 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PB4|LINE|L1 -111775 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr12-66169369-1 chr12 66169269 66169469 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282606, intron 1 of 7) intron (NM_001282606, intron 1 of 7) 703 NM_001282610 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding Merged-chr15-95593964-1 chr15 95593864 95594064 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L4_A_Mam|LINE|RTE-X 160871 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr10-8187146-1 chr10 8187046 8187246 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MamSINE1|SINE|tRNA-RTE 81159 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr4-12682721-1 chr4 12682621 12682821 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 459270 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr20-1391388-1 chr20 1391288 1391488 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_054014, intron 2 of 3) intron (NM_054014, intron 2 of 3) 1573 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr21-41623674-1 chr21 41623574 41623774 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -55628 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr10-8323492-1 chr10 8323392 8323592 0 12.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic UCON8|DNA|DNA -55187 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr17-82023179-1 chr17 82023079 82023279 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001271006) promoter-TSS (NM_001271006) -123 NM_144999 201255 Hs.143774 NM_144999 ENSG00000169683 LRRC45 -0 leucine rich repeat containing 45 protein-coding Merged-chr4-8192927-2 chr4 8192791 8193064 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6317 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr5-1385835-2 chr5 1385723 1385947 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -5762 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr10-7854223-1 chr10 7854123 7854323 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 35719 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr15-98649981-1 chr15 98649881 98650081 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_126453, exon 1 of 1) non-coding (NR_126453, exon 1 of 1) 1240 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA Merged-chr12-70685808-1 chr12 70685708 70685908 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 8 of 13) MIR|SINE|MIR -48368 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr15-92521689-2 chr15 92521544 92521835 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR26C|LTR|ERV1 50012 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr15-98835260-1 chr15 98835160 98835360 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 50834 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr10-7983055-1 chr10 7982955 7983155 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 4 of 6) intron (NM_031923, intron 4 of 6) 69436 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr12-57721480-1 chr12 57721380 57721580 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_006812) TTS (NM_006812) -4760 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA Merged-chr1-188540022-1 chr1 188539922 188540122 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 1096394 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr9-84588981-1 chr9 84588881 84589081 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1O|LTR|ERVL-MaLR -79477 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr1-171850542-1 chr1 171850442 171850642 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) intron (NM_015569, intron 1 of 20) 9064 NM_001136127 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr21-26851437-2 chr21 26851328 26851546 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6028 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding Merged-chr15-85083543-1 chr15 85083443 85083643 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 5 of 21) intron (NM_002605, intron 5 of 21) 101569 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr21-27261869-1 chr21 27261769 27261969 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -294749 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr4-28357122-1 chr4 28357022 28357222 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -462460 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr21-26186697-1 chr21 26186597 26186797 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15569 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr10-10864475-1 chr10 10864375 10864575 0 12.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326325, intron 2 of 15) MLT1A|LTR|ERVL-MaLR 65764 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-98717149-1 chr15 98717049 98717249 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -65928 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA Merged-chr1-186134984-1 chr1 186134884 186135084 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 86 of 106) intron (NM_031935, intron 86 of 106) -161289 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr13-88676144-1 chr13 88676044 88676244 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 49291 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr15-73678206-1 chr15 73678106 73678306 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6075 NM_001329629 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr12-70823990-1 chr12 70823890 70824090 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) -35060 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr12-70047742-1 chr12 70047642 70047842 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -195252 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr6-46255314-1 chr6 46255214 46255414 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) -21010 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr15-84871331-1 chr15 84871231 84871431 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_020778, exon 14 of 14) 3' UTR (NM_020778, exon 14 of 14) -13330 NM_001321721 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr10-10830857-1 chr10 10830757 10830957 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) intron (NM_001326326, intron 1 of 14) 32146 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-90767732-1 chr15 90767632 90767832 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001287248, intron 10 of 21) L1MC4|LINE|L1 50405 NM_001287246 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|RECQ2|RECQL2|RECQL3 Bloom syndrome RecQ like helicase protein-coding Merged-chr4-28617809-1 chr4 28617709 28617909 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -201773 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr1-171885998-1 chr1 171885898 171886098 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) MER115|DNA|hAT-Tip100 21806 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr10-8248848-1 chr10 8248748 8248948 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 19457 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr15-92681575-1 chr15 92681475 92681675 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -25774 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr10-8674312-1 chr10 8674212 8674412 0 12.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -79921 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr20-529452-2 chr20 529344 529560 0 12.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_177559, intron 1 of 13) MER44C|DNA|TcMar-Tigger 14386 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr1-186325383-2 chr1 186325256 186325511 0 12.150000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003292, intron 42 of 50) intron (NM_003292, intron 42 of 50) 29110 NM_001127708 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding Merged-chr10-8329360-1 chr10 8329260 8329460 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -61055 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr10-10526611-1 chr10 10526511 10526711 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) L2|LINE|L2 64096 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr21-41586309-1 chr21 41586209 41586409 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -78151 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr12-65815438-1 chr12 65815338 65815538 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026825, intron 1 of 1) L1PB1|LINE|L1 -9022 NM_003484 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding Merged-chr21-26561348-1 chr21 26561248 26561448 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135515, intron 3 of 3) intron (NR_135515, intron 3 of 3) 12056 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding Merged-chr15-91908553-1 chr15 91908453 91908653 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 54253 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr9-84292191-1 chr9 84292091 84292291 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022127, intron 11 of 18) intron (NM_022127, intron 11 of 18) 48588 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr15-98695298-1 chr15 98695198 98695398 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 1 of 20) intron (NM_001291858, intron 1 of 20) -44077 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA Merged-chr1-186484669-1 chr1 186484569 186484769 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -23561 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr12-82148193-1 chr12 82148093 82148293 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1B|LTR|ERVL-MaLR 194474 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr9-76286560-1 chr9 76286460 76286660 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001190482, intron 24 of 36) intron (NM_001190482, intron 24 of 36) 107968 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding Merged-chr1-171876594-1 chr1 171876494 171876694 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) L2b|LINE|L2 12402 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr21-26163630-1 chr21 26163530 26163730 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 7190 NM_000484 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr9-84593281-1 chr9 84593181 84593381 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -75177 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr15-85030375-1 chr15 85030275 85030475 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 48401 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr1-172041585-1 chr1 172041485 172041685 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 7 of 20) L2c|LINE|L2 -97223 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr4-8388568-1 chr4 8388468 8388668 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001101667, intron 13 of 16) intron (NM_001101667, intron 13 of 16) 52157 NM_001101667 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 -0 acyl-CoA oxidase 3 pristanoyl protein-coding Merged-chr1-186480457-1 chr1 186480357 186480557 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19349 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr1-171951267-1 chr1 171951167 171951367 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) intron (NM_015569, intron 2 of 20) 87075 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr9-83449402-1 chr9 83449302 83449502 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 18340 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr5-32313166-1 chr5 32313066 32313266 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001040446) promoter-TSS (NM_001040446) -158 NM_001294343 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding Merged-chr9-84555410-1 chr9 84555310 84555510 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -113048 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr12-69637229-1 chr12 69637129 69637329 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluSz|SINE|Alu -26067 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding Merged-chr13-75557242-1 chr13 75557142 75557342 0 12.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006002, intron 2 of 8) MIRc|SINE|MIR 7492 NM_006002 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding Merged-chr10-3310847-1 chr10 3310747 3310947 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -7848 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr1-186577539-1 chr1 186577439 186577639 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 102888 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr9-84215806-1 chr9 84215706 84215906 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HAL1|LINE|L1 124973 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr20-1368593-1 chr20 1368493 1368693 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_000801) TTS (NM_000801) 24368 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr13-79479830-1 chr13 79479730 79479930 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_046685, intron 2 of 2) intron (NR_046685, intron 2 of 2) -1294 NM_001161407 54602 Hs.525093 NM_019080 ENSG00000102471 NDFIP2 N4WBP5A Nedd4 family interacting protein 2 protein-coding Merged-chr13-75982008-1 chr13 75981908 75982108 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 105122 NR_126373 104326189 Hs.671216 NR_126373 ENSG00000223458 LMO7DN-IT1 C13orf45-IT1|TCONS_00021569 LMO7DN intronic transcript 1 ncRNA Merged-chr1-172275257-1 chr1 172275157 172275357 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) intron (NM_015569, intron 15 of 20) -130422 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr6-46694934-1 chr6 46694834 46695034 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001010870, intron 1 of 3) intron (NM_001010870, intron 1 of 3) -6769 NR_134643 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 -0 uncharacterized LOC101926934 ncRNA Merged-chr20-14402598-1 chr20 14402498 14402698 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_080676, intron 3 of 16) intron (NM_080676, intron 3 of 16) -64931 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding Merged-chr13-65506828-1 chr13 65506728 65506928 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -359219 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr13-65451824-1 chr13 65451724 65451924 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -414223 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr20-1446462-1 chr20 1446362 1446562 0 12.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_038164, intron 6 of 7) intron (NR_038164, intron 6 of 7) 21230 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr12-94973377-1 chr12 94973277 94973477 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258338, intron 2 of 2) intron (NM_001258338, intron 2 of 2) 30336 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr12-70655301-1 chr12 70655201 70655401 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073474, intron 9 of 10) L1MB2|LINE|L1 -17861 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr9-84214864-1 chr9 84214764 84214964 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1D|LTR|ERVL-MaLR 125915 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr15-99298246-1 chr15 99298146 99298346 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135759, intron 4 of 7) intron (NR_135759, intron 4 of 7) 40721 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr12-69495776-1 chr12 69495676 69495876 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278354, intron 2 of 9) AluJr|SINE|Alu 25427 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr5-41951895-1 chr5 41951795 41951995 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 26641 NM_033484 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr13-69456196-1 chr13 69456096 69456296 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HSMAR2|DNA|TcMar-Mariner 233850 NR_125752 103689913 Hs.585628 NR_125752 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA Merged-chr19-58544165-1 chr19 58544065 58544265 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005762) promoter-TSS (NM_005762) -304 NM_005762 10155 Hs.467408 NM_005762 ENSG00000130726 TRIM28 KAP1|PPP1R157|RNF96|TF1B|TIF1B tripartite motif containing 28 protein-coding Merged-chr21-27238361-1 chr21 27238261 27238461 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -271241 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr4-11766138-1 chr4 11766038 11766238 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -337225 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding Merged-chr4-12556987-1 chr4 12556887 12557087 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR79|LTR|ERVL 333536 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr6-46721897-1 chr6 46721797 46721997 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005084, intron 2 of 11) intron (NM_005084, intron 2 of 11) 13517 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding Merged-chr15-92175862-1 chr15 92175762 92175962 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER1B|DNA|hAT-Charlie -218025 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr1-185734027-1 chr1 185733927 185734127 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031935) promoter-TSS (NM_031935) -524 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr4-28684721-1 chr4 28684621 28684821 0 11.800000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -134861 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr1-171217889-1 chr1 171217789 171217989 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER61-int|LTR|ERV1 -30582 NM_002021 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 -0 flavin containing monooxygenase 1 protein-coding Merged-chr12-70837878-1 chr12 70837778 70837978 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) MER21B|LTR|ERVL -48948 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr6-46714209-1 chr6 46714109 46714309 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005084, intron 5 of 11) intron (NM_005084, intron 5 of 11) 21205 NM_005084 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding Merged-chr5-42051043-1 chr5 42050943 42051143 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 124302 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr1-171808196-1 chr1 171808096 171808296 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 26575 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr15-84821164-1 chr15 84821064 84821264 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020778, intron 1 of 13) intron (NM_020778, intron 1 of 13) 4484 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr12-70803489-1 chr12 70803389 70803589 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) -14559 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr4-23851822-1 chr4 23851722 23851922 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 29470 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr6-46811084-1 chr6 46810984 46811184 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005588, intron 6 of 13) L1PB1|LINE|L1 17727 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding Merged-chr4-11829042-1 chr4 11828942 11829142 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2B1|LTR|ERVL -394409 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-84190686-1 chr9 84190586 84190786 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 127243 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr1-185740275-1 chr1 185740175 185740375 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031935, intron 1 of 106) L2a|LINE|L2 5724 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr10-8596164-1 chr10 8596064 8596264 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1773 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr15-98886417-1 chr15 98886317 98886517 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 101991 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr4-12678285-1 chr4 12678185 12678385 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 454834 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr4-28704279-1 chr4 28704179 28704379 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -115303 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr10-12516575-1 chr10 12516475 12516675 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) L1ME1|LINE|L1 -62178 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr10-9449344-1 chr10 9449244 9449444 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -153751 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr15-99337320-1 chr15 99337220 99337420 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321675, intron 6 of 9) intron (NM_001321675, intron 6 of 9) 79795 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr12-66171732-1 chr12 66171632 66171832 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1660 NM_001282609 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding Merged-chr13-74218380-1 chr13 74218280 74218480 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13064 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr10-8005898-1 chr10 8005798 8005998 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 4 of 6) MIR|SINE|MIR 46593 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr12-84291521-1 chr12 84291421 84291621 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 621308 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr15-92627736-1 chr15 92627636 92627836 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_207446, intron 2 of 2) intron (NM_207446, intron 2 of 2) 28065 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr4-11909003-1 chr4 11908903 11909103 0 11.600000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -314448 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr4-8200693-2 chr4 8200564 8200822 0 11.514999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_134639, intron 1 of 14) intron (NR_134639, intron 1 of 14) 1449 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr10-10644893-1 chr10 10644793 10644993 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 150021 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr13-90197922-1 chr13 90197822 90198022 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33260 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr10-71868395-1 chr10 71868295 71868495 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -17020 NM_001042466 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding Merged-chr15-98976490-1 chr15 98976390 98976590 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001167902, intron 2 of 4) intron (NM_001167902, intron 2 of 4) 29166 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr22_KI270733v1_random-168867-1 chr22_KI270733v1_random 168767 168967 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1348 NR_128714 103504728 NR_128714 ENSG00000264063 MIR3687-2 hsa-mir-3687-2 microRNA 3687-2 ncRNA Merged-chr1-186607598-1 chr1 186607498 186607698 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 72829 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr21-41600090-1 chr21 41599990 41600190 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -79212 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr10-10614530-1 chr10 10614430 10614630 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 152015 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr12-70691568-1 chr12 70691468 70691668 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 8 of 13) L2c|LINE|L2 -54128 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr4-12604870-1 chr4 12604770 12604970 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 381419 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr13-112066764-1 chr13 112066664 112066864 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005986) promoter-TSS (NM_005986) -835 NM_005986 6656 Hs.202526 NM_005986 ENSG00000182968 SOX1 -0 SRY-box 1 protein-coding Merged-chr5-42174359-1 chr5 42174259 42174459 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_104635, intron 1 of 3) intron (NR_104635, intron 1 of 3) 986 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 -0 uncharacterized LOC101926960 ncRNA Merged-chr21-41679009-1 chr21 41678909 41679109 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024367) promoter-TSS (NR_024367) -293 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr1-194878268-1 chr1 194878168 194878368 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 1573523 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr20-1336320-1 chr20 1336220 1336420 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) MIRb|SINE|MIR -7085 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr21-26170842-1 chr21 26170742 26170942 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000484) promoter-TSS (NM_000484) -22 NM_001204301 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr12-83158915-1 chr12 83158815 83159015 0 11.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 471760 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr21-26967766-2 chr21 26967659 26967873 0 11.450000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_007038) promoter-TSS (NM_007038) -646 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr6-46253277-1 chr6 46253177 46253377 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001251973, intron 2 of 4) Charlie1a|DNA|hAT-Charlie -23047 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr9-76763506-1 chr9 76763406 76763606 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_015342) promoter-TSS (NR_015342) -930 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr12-71092470-1 chr12 71092370 71092570 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA2|LINE|L1 65529 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr4-12578530-1 chr4 12578430 12578630 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 355079 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr20-1465500-1 chr20 1465400 1465600 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018839, intron 1 of 7) intron (NM_018839, intron 1 of 7) 2192 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr1-171941265-1 chr1 171941165 171941365 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) intron (NM_015569, intron 2 of 20) 77073 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr5-42021642-1 chr5 42021542 42021742 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 96388 NM_033484 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr6-113797073-1 chr6 113796973 113797173 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -60262 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding Merged-chr13-88682374-1 chr13 88682274 88682474 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic ERVL-B4-int|LTR|ERVL 55521 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr16-62943845-1 chr16 62943745 62943945 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -907010 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding Merged-chr9-84220047-1 chr9 84219947 84220147 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 120732 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr10-9592185-1 chr10 9592085 9592285 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -296592 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr20-1389810-1 chr20 1389710 1389910 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_054014, intron 2 of 3) intron (NM_054014, intron 2 of 3) 3151 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr4-11769836-1 chr4 11769736 11769936 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -340923 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding Merged-chr4-12623841-1 chr4 12623741 12623941 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 400390 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr15-99062910-1 chr15 99062810 99063010 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -42170 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr12-66132420-1 chr12 66132320 66132520 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_125724, intron 1 of 1) intron (NR_125724, intron 1 of 1) -1667 NM_032338 84298 Hs.504820 NM_032338 ENSG00000139233 LLPH C12orf31|hLLP LLP homolog, long-term synaptic facilitation protein-coding Merged-chr10-7940077-1 chr10 7939977 7940177 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) HAL1|LINE|L1 112414 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr5-1337334-1 chr5 1337234 1337434 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_030782, intron 5 of 16) intron (NM_030782, intron 5 of 16) 7736 NM_030782 81037 Hs.444673 NM_030782 ENSG00000049656 CLPTM1L CRR9 CLPTM1 like protein-coding Merged-chr15-91867273-1 chr15 91867173 91867373 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 12973 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-186608102-1 chr1 186608002 186608202 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic PRIMAX-int|LTR|ERV1 72325 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding Merged-chr21-27260425-1 chr21 27260325 27260525 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -293305 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr10-3296905-1 chr10 3296805 3297005 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA17|LINE|L1 -21790 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr15-84827401-1 chr15 84827301 84827501 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_020778, intron 2 of 13) intron (NM_020778, intron 2 of 13) 10721 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr13-90108355-1 chr13 90108255 90108455 0 11.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_047489, exon 2 of 6) non-coding (NR_047489, exon 2 of 6) 11362 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 -0 long intergenic non-protein coding RNA 559 ncRNA Merged-chr6-46881553-2 chr6 46881407 46881699 0 11.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001098518, exon 8 of 21) exon (NM_001098518, exon 8 of 21) -21918 NR_110658 101926962 Hs.680113 NR_110658 LOC101926962 -0 uncharacterized LOC101926962 ncRNA Merged-chr20-561880-2 chr20 561742 562019 0 11.200001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -18042 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr9-84570701-1 chr9 84570601 84570801 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -97757 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr10-7952187-1 chr10 7952087 7952287 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 100304 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr15-98912720-1 chr15 98912620 98912820 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 7 of 20) intron (NM_001291858, intron 7 of 20) 92936 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr10-8196604-1 chr10 8196504 8196704 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 71701 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr20-470182-1 chr20 470082 470282 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HERVK22-int|LTR|ERVK -7629 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr1-171820404-1 chr1 171820304 171820504 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -21074 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr4-12686401-1 chr4 12686301 12686501 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 462950 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr13-74214005-1 chr13 74213905 74214105 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HAL1|LINE|L1 -17439 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr12-83971933-1 chr12 83971833 83972033 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Arthur1B|DNA|hAT-Tip100 940896 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr1-171986762-1 chr1 171986662 171986862 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) intron (NM_015569, intron 2 of 20) 122570 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr12-70112947-1 chr12 70112847 70113047 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MA4A|LINE|L1 -130047 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr9-84223399-1 chr9 84223299 84223499 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 117380 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr12-57671111-1 chr12 57671011 57671211 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Charlie1a|DNA|hAT-Charlie -22844 NM_001017956 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9, endoplasmic reticulum lectin protein-coding Merged-chr17-410160-1 chr17 410060 410260 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001013672) promoter-TSS (NM_001013672) -167 NM_001013672 400566 Hs.499607 NM_001013672 ENSG00000187624 C17orf97 CK20|LIAT1 chromosome 17 open reading frame 97 protein-coding Merged-chr13-74251002-1 chr13 74250902 74251102 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_144451, intron 1 of 1) intron (NR_144451, intron 1 of 1) 19558 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr15-84922791-1 chr15 84922691 84922891 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321722, intron 11 of 18) L2a|LINE|L2 38130 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr12-70623175-1 chr12 70623075 70623275 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330204, intron 2 of 32) intron (NM_001330204, intron 2 of 32) -13151 NM_001206972 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr15-96592947-1 chr15 96592847 96593047 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 188707 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 -0 SPATA8 antisense RNA 1 (head to head) ncRNA Merged-chr4-12639988-1 chr4 12639888 12640088 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 416537 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr6-46849135-1 chr6 46849035 46849235 0 11.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -54336 NR_110658 101926962 Hs.680113 NR_110658 LOC101926962 -0 uncharacterized LOC101926962 ncRNA Merged-chr4-12720025-2 chr4 12719888 12720163 0 11.100000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 496574 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr10-10676586-2 chr10 10676435 10676737 0 11.050000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) L1MC1|LINE|L1 118328 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr15-99104899-2 chr15 99104762 99105037 0 11.049999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_015286) promoter-TSS (NM_015286) -181 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr15-92715037-1 chr15 92714937 92715137 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -59236 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr1-171949482-1 chr1 171949382 171949582 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) AluJo|SINE|Alu 85290 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr12-84305328-1 chr12 84305228 84305428 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER54A|LTR|ERVL 607501 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr20-547619-1 chr20 547519 547719 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -3781 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr21-26205677-1 chr21 26205577 26205777 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2B3|LTR|ERVL -34549 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr1-181919429-1 chr1 181919329 181919529 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 142283 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr20-1410535-1 chr20 1410435 1410635 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1L|LTR|ERVL-MaLR -17363 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr15-91069415-1 chr15 91069315 91069515 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Charlie25|DNA|hAT-Charlie -30173 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding Merged-chr15-92801827-1 chr15 92801727 92801927 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 6343 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr13-91229793-1 chr13 91229693 91229893 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -18095 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 -0 long intergenic non-protein coding RNA 379 ncRNA Merged-chr13-74243854-1 chr13 74243754 74243954 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_144451, intron 1 of 1) L2c|LINE|L2 12410 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr15-92401029-1 chr15 92400929 92401129 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) intron (NM_001330416, intron 1 of 4) 7119 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr10-10611431-1 chr10 10611331 10611531 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 148916 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr15-90708508-1 chr15 90708408 90708608 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120372, intron 2 of 3) L1MEc|LINE|L1 8632 NR_120372 101926895 Hs.564760 NR_120372 ENSG00000259736 CRTC3-AS1 -0 CRTC3 antisense RNA 1 ncRNA Merged-chr15-90968985-1 chr15 90968885 90969085 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001267580, intron 12 of 12) intron (NM_001267580, intron 12 of 12) 2616 NR_051984 100507118 Hs.366401 NR_051984 ENSG00000258725 PRC1-AS1 -0 PRC1 antisense RNA 1 ncRNA Merged-chr20-503501-1 chr20 503401 503601 0 11.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_177560, intron 2 of 11) MER119|DNA|hAT-Charlie 40337 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr9-76737195-1 chr9 76737095 76737295 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) intron (NR_131751, intron 5 of 15) -27241 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr13-88816593-1 chr13 88816493 88816693 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu 189740 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr10-3302268-1 chr10 3302168 3302368 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16E1|LTR|ERVL -16427 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr21-26161147-1 chr21 26161047 26161247 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 9673 NM_000484 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr5-41976956-1 chr5 41976856 41977056 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MSTB-int|LTR|ERVL-MaLR 51702 NM_033484 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr1-181915155-1 chr1 181915055 181915255 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 146557 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr21-41632133-1 chr21 41632033 41632233 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -47169 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr9-83406718-1 chr9 83406618 83406818 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 61024 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr13-65477854-1 chr13 65477754 65477954 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -388193 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr1-171849069-1 chr1 171848969 171849169 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) intron (NM_015569, intron 1 of 20) 7591 NM_001136127 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr4-12546149-1 chr4 12546049 12546249 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT2B3|LTR|ERVL 322698 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr5-1367210-1 chr5 1367110 1367310 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125810, intron 1 of 1) L1MC1|LINE|L1 12863 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr21-36730184-1 chr21 36730084 36730284 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_009586, intron 6 of 9) intron (NM_009586, intron 6 of 9) 31051 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Merged-chr15-84895111-1 chr15 84895011 84895211 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_201651, exon 6 of 7) exon (NM_201651, exon 6 of 7) 10450 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr12-65558595-1 chr12 65558495 65558695 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_120434, exon 5 of 5) non-coding (NR_120434, exon 5 of 5) -1284 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 -0 uncharacterized LOC105369187 ncRNA Merged-chr3-196992130-1 chr3 196992030 196992230 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10776 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA Merged-chr10-7941758-1 chr10 7941658 7941858 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) intron (NM_031923, intron 2 of 6) 110733 NR_104329 399717 Hs.158992 NM_207423 ENSG00000197308 GATA3-AS1 -0 GATA3 antisense RNA 1 ncRNA Merged-chr10-8746313-1 chr10 8746213 8746413 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -151676 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LOC105755953 -0 uncharacterized LOC105755953 ncRNA Merged-chr4-28226632-1 chr4 28226532 28226732 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -592950 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr9-76704723-1 chr9 76704623 76704823 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 7 of 15) intron (NR_131751, intron 7 of 15) -12308 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr1-171789392-1 chr1 171789292 171789492 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001007239, intron 4 of 7) intron (NM_001007239, intron 4 of 7) 7771 NM_001007239 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr6-46868154-1 chr6 46868054 46868254 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015234, intron 12 of 20) intron (NM_015234, intron 12 of 20) -35317 NR_110658 101926962 Hs.680113 NR_110658 LOC101926962 -0 uncharacterized LOC101926962 ncRNA Merged-chr15-91938197-1 chr15 91938097 91938297 0 10.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) MIRb|SINE|MIR 83897 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-12129578-2 chr10 12129389 12129768 0 10.865000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001142628) promoter-TSS (NM_001142628) -63 NM_018144 55176 Hs.112955 NM_018144 ENSG00000065665 SEC61A2 -0 Sec61 translocon alpha 2 subunit protein-coding Merged-chr15-73690927-2 chr15 73690749 73691105 0 10.799999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001329628, intron 1 of 7) L2b|LINE|L2 6196 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr9-84222403-1 chr9 84222303 84222503 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR40b|LTR|ERVL 118376 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr5-24703175-1 chr5 24703075 24703275 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -58197 NM_006727 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 -0 cadherin 10 protein-coding Merged-chr15-91074889-1 chr15 91074789 91074989 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -24699 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding Merged-chr21-27275915-1 chr21 27275815 27276015 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -308795 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr3-196988722-1 chr3 196988622 196988822 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -14184 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA Merged-chr15-92613204-1 chr15 92613104 92613304 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -40941 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr9-76303129-1 chr9 76303029 76303229 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001190482, intron 27 of 36) intron (NM_001190482, intron 27 of 36) 91399 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding Merged-chr13-78912419-1 chr13 78912319 78912519 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -72369 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA Merged-chr12-69827973-1 chr12 69827873 69828073 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182530, intron 1 of 24) L1ME4a|LINE|L1 2650 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr4-11903286-1 chr4 11903186 11903386 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -320165 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr1-186350328-1 chr1 186350228 186350428 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_003292, exon 21 of 51) exon (NM_003292, exon 21 of 51) 24997 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR -0 translocated promoter region, nuclear basket protein protein-coding Merged-chr13-65433061-1 chr13 65432961 65433161 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -432986 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr15-100552455-1 chr15 100552355 100552555 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_073405, exon 1 of 1) non-coding (NR_073405, exon 1 of 1) -6211 NR_135693 102723335 Hs.587819 NR_135693 ENSG00000259540 LOC102723335 -0 uncharacterized LOC102723335 ncRNA Merged-chr4-23881770-1 chr4 23881670 23881870 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001330753) promoter-TSS (NM_001330753) -478 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr1-186468470-1 chr1 186468370 186468570 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_126002, intron 4 of 4) L1M3|LINE|L1 -7362 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr15-98969198-1 chr15 98969098 98969298 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001167902, intron 4 of 4) intron (NM_001167902, intron 4 of 4) 36458 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr10-10647516-1 chr10 10647416 10647616 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) intron (NM_001326319, intron 1 of 16) 147398 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr10-9393260-1 chr10 9393160 9393360 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -97667 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr13-109157694-1 chr13 109157594 109157794 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001198950, intron 32 of 34) intron (NM_001198950, intron 32 of 34) 9609 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 -0 MYO16 antisense RNA 1 ncRNA Merged-chr4-12709134-1 chr4 12709034 12709234 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 485683 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-84284141-1 chr9 84284041 84284241 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_022127, intron 15 of 18) intron (NM_022127, intron 15 of 18) 56638 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr20-1362432-1 chr20 1362332 1362532 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) L2|LINE|L2 30529 NR_106929 102465524 NR_106929 ENSG00000088832 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA Merged-chr15-98787800-1 chr15 98787700 98787900 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 3374 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr9-83330774-1 chr9 83330674 83330874 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 6 of 13) MER58A|DNA|hAT-Charlie 1187 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr15-92619407-1 chr15 92619307 92619507 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_207446, exon 3 of 3) 3' UTR (NM_207446, exon 3 of 3) 36394 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr1-186349117-1 chr1 186349017 186349217 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003292, intron 21 of 50) MER47A|DNA|TcMar-Tigger 26208 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR -0 translocated promoter region, nuclear basket protein protein-coding Merged-chr12-78519581-1 chr12 78519481 78519681 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA8|LINE|L1 -159835 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LOC105369860 -0 uncharacterized LOC105369860 ncRNA Merged-chr15-84784756-1 chr15 84784656 84784856 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_014630, exon 4 of 11) exon (NM_014630, exon 4 of 11) -31924 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 MAK|MIDORI alpha kinase 3 protein-coding Merged-chr4-8610411-1 chr4 8610311 8610511 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003652, intron 6 of 9) intron (NM_003652, intron 6 of 9) 17751 NM_003652 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ -0 carboxypeptidase Z protein-coding Merged-chr1-171815453-1 chr1 171815353 171815553 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -26025 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr15-99277414-1 chr15 99277314 99277514 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321675, intron 3 of 9) L1MC4|LINE|L1 19889 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr9-83451415-1 chr9 83451315 83451515 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) (CA)n|Simple_repeat|Simple_repeat 16327 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr4-12643879-1 chr4 12643779 12643979 0 10.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 420428 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-84566077-1 chr9 84565977 84566177 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -102381 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr12-70730164-1 chr12 70730064 70730264 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 24444 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr9-84612501-1 chr9 84612401 84612601 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -55957 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr9-84560107-1 chr9 84560007 84560207 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR78|LTR|ERV1 -108351 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr5-134886291-1 chr5 134886191 134886391 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024715, intron 1 of 4) intron (NM_024715, intron 1 of 4) 12521 NM_024715 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding Merged-chr9-76687588-1 chr9 76687488 76687688 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 8 of 15) intron (NR_131751, intron 8 of 15) 4827 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr15-98861156-1 chr15 98861056 98861256 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 76730 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-91905079-1 chr15 91904979 91905179 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) L4_B_Mam|LINE|RTE-X 50779 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-57684140-1 chr12 57684040 57684240 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PB2|LINE|L1 -9815 NM_001017956 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9, endoplasmic reticulum lectin protein-coding Merged-chr10-8847338-1 chr10 8847238 8847438 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L3|LINE|CR1 -50651 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LOC105755953 -0 uncharacterized LOC105755953 ncRNA Merged-chr9-84617531-1 chr9 84617431 84617631 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -50927 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr12-83411451-1 chr12 83411351 83411551 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Charlie2a|DNA|hAT-Charlie 724296 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr12-66173194-1 chr12 66173094 66173294 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER45B|DNA|hAT-Tip100 -3122 NM_001282609 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding Merged-chr10-9417005-1 chr10 9416905 9417105 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -121412 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr5-936024-1 chr5 935924 936124 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 43170 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr13-73153730-1 chr13 73153630 73153830 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 94938 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding Merged-chr9-79952063-1 chr9 79951963 79952163 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) -22960 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr21-27040591-1 chr21 27040491 27040691 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -73471 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr15-99029167-1 chr15 99029067 99029267 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_126487, intron 3 of 3) intron (NR_126487, intron 3 of 3) 14463 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 -0 leukemia-associated non-coding IGF1R activator RNA 1 ncRNA Merged-chr10-12225538-1 chr10 12225438 12225638 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006023, intron 6 of 12) intron (NM_006023, intron 6 of 12) -29394 NM_001321647 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding Merged-chr15-90953577-1 chr15 90953477 90953677 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001039675, exon 23 of 23) exon (NM_001039675, exon 23 of 23) -1299 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 -0 RCC1 domain containing 1 protein-coding Merged-chr15-95727682-1 chr15 95727582 95727782 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 294589 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr4-23875228-1 chr4 23875128 23875328 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 6064 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr15-90925391-1 chr15 90925291 90925491 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4789 NM_001039675 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr5-1381748-1 chr5 1381648 1381848 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (CA)n|Simple_repeat|Simple_repeat -1675 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr4-23874187-1 chr4 23874087 23874287 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 7105 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr15-99062317-1 chr15 99062217 99062417 0 10.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER63A|DNA|hAT-Blackjack -42763 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr10-10837071-1 chr10 10836971 10837171 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) intron (NM_001326326, intron 1 of 14) 38360 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr5-41968101-1 chr5 41968001 41968201 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 42847 NM_033484 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding Merged-chr21-26958792-1 chr21 26958692 26958892 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007038, intron 1 of 7) L2c|LINE|L2 4831 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 -0 microRNA 4759 ncRNA Merged-chr1-172863337-1 chr1 172863237 172863437 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 187626 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL tumor necrosis factor superfamily member 18 protein-coding Merged-chr10-3304025-1 chr10 3303925 3304125 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -14670 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chrX-20141959-1 chrX 20141859 20142059 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001412) promoter-TSS (NM_001412) -111 NM_001412 1964 Hs.522590 NM_001412 ENSG00000173674 EIF1AX EIF1A|EIF1AP1|EIF4C|eIF-1A|eIF-4C eukaryotic translation initiation factor 1A, X-linked protein-coding Merged-chr9-80103290-1 chr9 80103190 80103390 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME2z|LINE|L1 128267 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr21-41361373-1 chr21 41361273 41361473 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002463) promoter-TSS (NM_002463) -650 NM_002463 4600 Hs.926 NM_002463 ENSG00000183486 MX2 MXB MX dynamin like GTPase 2 protein-coding Merged-chr6-46287291-1 chr6 46287191 46287391 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_125838, intron 1 of 3) intron (NR_125838, intron 1 of 3) 10967 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr12-66182615-1 chr12 66182515 66182715 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6583 NM_001142523 11213 Hs.369265 NM_007199 ENSG00000090376 IRAK3 ASRT5|IRAKM interleukin 1 receptor associated kinase 3 protein-coding Merged-chr15-92422086-1 chr15 92421986 92422186 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) MER58D|DNA|hAT-Charlie 28176 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr13-90112839-1 chr13 90112739 90112939 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_047489, intron 1 of 5) intron (NR_047489, intron 1 of 5) 6878 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 -0 long intergenic non-protein coding RNA 559 ncRNA Merged-chr4-11825775-1 chr4 11825675 11825875 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -396862 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding Merged-chr9-76808949-1 chr9 76808849 76809049 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) intron (NR_131751, intron 5 of 15) 44513 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr1-171457276-1 chr1 171457176 171457376 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -28251 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding Merged-chr10-8755906-1 chr10 8755806 8756006 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -142083 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LOC105755953 -0 uncharacterized LOC105755953 ncRNA Merged-chr12-83768960-1 chr12 83768860 83769060 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 1081805 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr9-84072084-1 chr9 84071984 84072184 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_110995, intron 2 of 8) L1MEf|LINE|L1 8641 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr15-99110902-1 chr15 99110802 99111002 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_145728, intron 1 of 3) intron (NM_145728, intron 1 of 3) 5822 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr12-70830585-1 chr12 70830485 70830685 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 2 of 13) intron (NM_002849, intron 2 of 13) -41655 NM_001207015 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr15-92261137-1 chr15 92261037 92261237 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME3F|LINE|L1 -132750 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr15-99027653-1 chr15 99027553 99027753 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_126487, exon 3 of 4) non-coding (NR_126487, exon 3 of 4) 12949 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 -0 leukemia-associated non-coding IGF1R activator RNA 1 ncRNA Merged-chr4-12724101-1 chr4 12724001 12724201 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 500650 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr10-7843978-1 chr10 7843878 7844078 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) AmnSINE1|SINE|5S-Deu-L2 25474 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr13-112066143-1 chr13 112066043 112066243 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120392, intron 1 of 3) intron (NR_120392, intron 1 of 3) -1456 NM_005986 6656 Hs.202526 NM_005986 ENSG00000182968 SOX1 -0 SRY-box 1 protein-coding Merged-chr12-66122282-1 chr12 66122182 66122382 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_032338) TTS (NM_032338) -8469 NR_125724 103625681 Hs.504820 NR_125724 ENSG00000239335 LLPH-AS1 -0 LLPH antisense RNA 1 (head to head) ncRNA Merged-chr13-75591220-1 chr13 75591120 75591320 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006002, intron 6 of 8) intron (NM_006002, intron 6 of 8) -29214 NM_005358 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LOMP LIM domain 7 protein-coding Merged-chr21-26982964-1 chr21 26982864 26983064 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -15844 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr6-46288370-1 chr6 46288270 46288470 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_125838, intron 1 of 3) intron (NR_125838, intron 1 of 3) 12046 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr15-98910525-1 chr15 98910425 98910625 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 6 of 20) intron (NM_001291858, intron 6 of 20) 95131 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L -0 pyroglutamyl-peptidase I-like protein-coding Merged-chr9-77937023-1 chr9 77936923 77937123 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 94426 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding Merged-chr10-9482770-1 chr10 9482670 9482870 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger1|DNA|TcMar-Tigger -187177 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr12-83262150-1 chr12 83262050 83262250 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 574995 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr15-92399383-1 chr15 92399283 92399483 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) intron (NM_001330416, intron 1 of 4) 5473 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr12-70734045-1 chr12 70733945 70734145 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 20563 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr4-23892732-1 chr4 23892632 23892832 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -2655 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr4-12649588-1 chr4 12649488 12649688 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 426137 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr13-65486385-1 chr13 65486285 65486485 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC2|LINE|L1 -379662 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr1-171990000-1 chr1 171989900 171990100 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 4 of 20) HAL1|LINE|L1 125808 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr10-3327312-1 chr10 3327212 3327412 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131187, intron 1 of 1) L1MD2|LINE|L1 8617 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr15-91931191-1 chr15 91931091 91931291 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 76891 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-99346128-1 chr15 99346028 99346228 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321675, intron 6 of 9) AluJo|SINE|Alu 88603 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr4-12645138-1 chr4 12645038 12645238 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTC|LTR|ERVL-MaLR 421687 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-76771881-1 chr9 76771781 76771981 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_132313, intron 1 of 2) intron (NR_132313, intron 1 of 2) 7445 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr12-70580248-1 chr12 70580148 70580348 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001109754, intron 10 of 33) intron (NM_001109754, intron 10 of 33) 29776 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr15-91012247-1 chr15 91012147 91012347 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018668, intron 5 of 22) intron (NM_018668, intron 5 of 22) 10374 NM_001289148 26276 Hs.745007 NM_018668 ENSG00000184056 VPS33B -0 VPS33B, late endosome and lysosome associated protein-coding Merged-chr12-57726736-1 chr12 57726636 57726836 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001122772, exon 19 of 19) exon (NM_001122772, exon 19 of 19) 496 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA Merged-chr15-90810663-1 chr15 90810563 90810763 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001287248, intron 20 of 21) intron (NM_001287248, intron 20 of 21) -57929 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr17-42388644-1 chr17 42388544 42388744 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_139276) promoter-TSS (NM_139276) -149 NM_139276 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding Merged-chr9-84573637-1 chr9 84573537 84573737 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -94821 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr9-80832802-1 chr9 80832702 80832902 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME1|LINE|L1 856733 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr4-28602009-1 chr4 28601909 28602109 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1D|LTR|ERVL-MaLR -217573 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr21-27253947-1 chr21 27253847 27254047 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME3E|LINE|L1 -286827 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr10-9495292-1 chr10 9495192 9495392 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MEc|LINE|L1 -199699 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr15-91883879-1 chr15 91883779 91883979 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 29579 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr13-74155881-1 chr13 74155781 74155981 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MamGypLTR2c|LTR|Gypsy -21952 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr19-58401347-1 chr19 58401247 58401447 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 5257 NM_001195135 646862 Hs.728121 NM_001195135 ENSG00000269855 RNF225 -0 ring finger protein 225 protein-coding Merged-chr12-83771541-1 chr12 83771441 83771641 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 1084386 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr20-1454866-1 chr20 1454766 1454966 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038164, intron 3 of 7) intron (NR_038164, intron 3 of 7) 12826 NM_016143 55968 Hs.12865 NM_016143 ENSG00000088833 NSFL1C P47|UBX1|UBXD10|UBXN2C|dJ776F14.1 NSFL1 cofactor protein-coding Merged-chr1-171942805-1 chr1 171942705 171942905 0 10.300000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) L2a|LINE|L2 78613 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr21-26426022-1 chr21 26425922 26426122 0 10.300000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135515, intron 1 of 3) MER54A|LTR|ERVL 20079 NR_135515 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 -0 cysteine and tyrosine rich 1 antisense RNA 1 ncRNA Merged-chr9-76634532-2 chr9 76634365 76634700 0 10.010000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330680, intron 7 of 10) MER57C2|LTR|ERV1 57883 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr9-84213200-1 chr9 84213100 84213300 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 127579 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr13-91225792-1 chr13 91225692 91225892 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HERVL40-int|LTR|ERVL -14094 NR_047004 100874150 Hs.711947 NR_047004 LINC00379 -0 long intergenic non-protein coding RNA 379 ncRNA Merged-chr20-553664-1 chr20 553564 553764 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MC4|LINE|L1 -9826 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr1-171963920-1 chr1 171963820 171964020 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) MER4D1|LTR|ERV1 99728 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr20-1340876-1 chr20 1340776 1340976 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_040047, intron 1 of 2) intron (NR_040047, intron 1 of 2) -11641 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2 syndecan binding protein 2 protein-coding Merged-chr1-171217377-1 chr1 171217277 171217477 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER61-int|LTR|ERV1 -31094 NM_002021 2326 Hs.1424 NM_002021 ENSG00000010932 FMO1 -0 flavin containing monooxygenase 1 protein-coding Merged-chr15-90765585-1 chr15 90765485 90765685 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001287248, intron 9 of 21) intron (NM_001287248, intron 9 of 21) 48258 NM_001287246 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|RECQ2|RECQL2|RECQL3 Bloom syndrome RecQ like helicase protein-coding Merged-chr21-27216483-1 chr21 27216383 27216583 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Charlie20a|DNA|hAT-Charlie -249363 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr10-10620278-1 chr10 10620178 10620378 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) AluYg6|SINE|Alu 157763 NM_001326321 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr13-65419675-1 chr13 65419575 65419775 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJo|SINE|Alu -446372 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr4-12567654-1 chr4 12567554 12567754 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 344203 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr4-12582272-1 chr4 12582172 12582372 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 358821 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr17-42998272-1 chr17 42998172 42998372 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000988) promoter-TSS (NM_000988) -157 NM_000988 6155 Hs.514196 NM_000988 ENSG00000131469 RPL27 L27 ribosomal protein L27 protein-coding Merged-chr17-58518063-1 chr17 58517963 58518163 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004687) promoter-TSS (NM_004687) -173 NM_004687 9110 Hs.514373 NM_004687 ENSG00000108389 MTMR4 FYVE-DSP2|ZFYVE11 myotubularin related protein 4 protein-coding Merged-chr12-57722141-1 chr12 57722041 57722241 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_006812) TTS (NM_006812) -4099 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA Merged-chr4-28602474-1 chr4 28602374 28602574 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -217108 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr9-76775179-1 chr9 76775079 76775279 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_132313, intron 1 of 2) intron (NR_132313, intron 1 of 2) 10743 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr9-79979882-1 chr9 79979782 79979982 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_121212, intron 2 of 4) intron (NR_121212, intron 2 of 4) 4859 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr1-194908016-1 chr1 194907916 194908116 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger3b|DNA|TcMar-Tigger 1603271 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr9-84540310-1 chr9 84540210 84540410 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME4a|LINE|L1 -128148 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr17-76265021-1 chr17 76264921 76265121 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_182565) promoter-TSS (NM_182565) -184 NM_182565 283991 Hs.744981 NM_182565 ENSG00000185262 UBALD2 FAM100B UBA like domain containing 2 protein-coding Merged-chr13-88755512-1 chr13 88755412 88755612 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MEc|LINE|L1 128659 NR_047490 100861553 Hs.560132 NR_047490 LINC00560 -0 long intergenic non-protein coding RNA 560 ncRNA Merged-chr10-8703038-1 chr10 8702938 8703138 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -108647 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr4-8213479-1 chr4 8213379 8213579 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 3 of 14) MIRb|SINE|MIR 14235 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr10-12470281-1 chr10 12470181 12470381 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) intron (NM_153498, intron 1 of 10) -108472 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr6-45946934-1 chr6 45946834 45947034 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001256023, intron 3 of 5) intron (NM_001256023, intron 3 of 5) -9337 NR_045673 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding Merged-chr4-28265869-1 chr4 28265769 28265969 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -553713 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr1-172261801-1 chr1 172261701 172261901 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) L1MA4A|LINE|L1 -116966 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr15-92450966-1 chr15 92450866 92451066 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006011, intron 5 of 5) intron (NM_006011, intron 5 of 5) 20580 NR_126501 104613533 Hs.97584 NR_126501 ENSG00000259170 LOC104613533 -0 uncharacterized LOC104613533 ncRNA Merged-chr1-171767166-1 chr1 171767066 171767266 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -14455 NM_015935 51603 Hs.494705 NM_014955 ENSG00000010165 METTL13 5630401D24Rik|CGI-01|KIAA0859|feat methyltransferase like 13 protein-coding Merged-chr13-65471855-1 chr13 65471755 65471955 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -394192 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr6-46274375-1 chr6 46274275 46274475 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) -1949 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 -0 uncharacterized LOC101926915 ncRNA Merged-chr11-44862428-1 chr11 44862328 44862528 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_130783, intron 2 of 8) intron (NM_130783, intron 2 of 8) 87780 NM_001318384 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding Merged-chr13-74263762-1 chr13 74263662 74263862 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 32318 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr9-80025828-1 chr9 80025728 80025928 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_121212, intron 3 of 4) intron (NR_121212, intron 3 of 4) 50805 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr4-8216400-1 chr4 8216300 8216500 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 5 of 14) intron (NR_134639, intron 5 of 14) 17156 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr9-84104238-1 chr9 84104138 84104338 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 40795 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr10-10635089-1 chr10 10634989 10635189 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326319, intron 1 of 16) MLT1I|LTR|ERVL-MaLR 159825 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1 pseudogene pseudo Merged-chr12-70095214-1 chr12 70095114 70095314 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -147780 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr13-74218587-1 chr13 74218487 74218687 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -12857 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr20-1401587-1 chr20 1401487 1401687 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HERVK3-int|LTR|ERVK -8415 NM_000801 2280 Hs.471933 NM_000801 ENSG00000088832 FKBP1A FKBP-12|FKBP-1A|FKBP1|FKBP12|PKC12|PKCI2|PPIASE FK506 binding protein 1A protein-coding Merged-chr12-95037339-1 chr12 95037239 95037439 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001127362, intron 10 of 11) intron (NM_001127362, intron 10 of 11) -33626 NM_001258338 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr3-196992361-1 chr3 196992261 196992461 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -10545 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA Merged-chr17-43401508-1 chr17 43401408 43401608 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001661) TTS (NM_001661) 2523 NM_001661 379 Hs.183153 NM_001661 ENSG00000175906 ARL4D ARF4L|ARL6 ADP ribosylation factor like GTPase 4D protein-coding Merged-chr12-69934932-1 chr12 69934832 69935032 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182530, intron 16 of 24) LTR28B|LTR|ERV1 109609 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr1-194894726-1 chr1 194894626 194894826 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MC|LINE|L1 1589981 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr1-27725763-1 chr1 27725663 27725863 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001143912) promoter-TSS (NM_001143912) -216 NM_152660 199870 Hs.469359 NM_152660 ENSG00000009780 FAM76A -0 family with sequence similarity 76 member A protein-coding Merged-chr17-75405806-1 chr17 75405706 75405906 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002086) promoter-TSS (NM_002086) -97 NM_203506 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding Merged-chr4-12616376-1 chr4 12616276 12616476 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic ERV3-16A3_I-int|LTR|ERVL 392925 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr1-181937656-1 chr1 181937556 181937756 0 10.000000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Charlie1b|DNA|hAT-Charlie 124056 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr15-92592937-1 chr15 92592837 92593037 0 10.000000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Charlie21a|DNA|hAT-Charlie -20674 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr12-70650798-2 chr12 70650675 70650922 0 9.940001 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_073474, intron 9 of 10) MADE1|DNA|TcMar-Mariner -13358 NM_001109754 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr13-65468448-1 chr13 65468348 65468548 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR73|LTR|ERV1 -397599 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr19-5904537-1 chr19 5904437 5904637 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001193375) promoter-TSS (NM_001193375) -304 NM_001017921 400673 Hs.620821 NM_001017921 ENSG00000187650 VMAC -0 vimentin-type intermediate filament associated coiled-coil protein protein-coding Merged-chr4-8199754-1 chr4 8199654 8199854 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 1 of 14) intron (NR_134639, intron 1 of 14) 510 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr10-12162555-1 chr10 12162455 12162655 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001142627, intron 11 of 11) MER5B|DNA|hAT-Charlie -31739 NR_039699 100616488 NR_039699 ENSG00000265653 MIR548AK -0 microRNA 548ak ncRNA Merged-chr9-84494174-1 chr9 84494074 84494274 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJo|SINE|Alu -125676 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr21-41489100-1 chr21 41489000 41489200 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005656, intron 4 of 13) intron (NM_005656, intron 4 of 13) 18965 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr21-41480309-1 chr21 41480209 41480409 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005656, intron 6 of 13) intron (NM_005656, intron 6 of 13) 27756 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr15-99344059-1 chr15 99343959 99344159 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321675, intron 6 of 9) intron (NM_001321675, intron 6 of 9) 86534 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr21-41585437-1 chr21 41585337 41585537 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (AC)n|Simple_repeat|Simple_repeat -77279 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr21-27265711-1 chr21 27265611 27265811 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -298591 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr1-194931653-1 chr1 194931553 194931753 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1G|LTR|ERVL-MaLR 1626908 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr13-75570616-1 chr13 75570516 75570716 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006002, intron 6 of 8) intron (NM_006002, intron 6 of 8) 20866 NM_006002 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding Merged-chr13-68837415-1 chr13 68837315 68837515 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 47910 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 -0 long intergenic non-protein coding RNA 550 ncRNA Merged-chr10-12229395-1 chr10 12229295 12229495 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006023, intron 6 of 12) intron (NM_006023, intron 6 of 12) -33251 NM_001321647 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding Merged-chr15-92349339-1 chr15 92349239 92349439 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -44548 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr15-90796956-1 chr15 90796856 90797056 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001287248, intron 16 of 21) L2a|LINE|L2 -71636 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr12-65825067-1 chr12 65824967 65825167 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001300919, exon 1 of 4) 5' UTR (NM_001300919, exon 1 of 4) 607 NM_001300918 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding Merged-chr13-74197826-1 chr13 74197726 74197926 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33618 NR_144451 100507612 Hs.447508 NR_144451 LINC00402 -0 long intergenic non-protein coding RNA 402 ncRNA Merged-chr15-73709636-1 chr15 73709536 73709736 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024736, intron 7 of 9) intron (NM_001024736, intron 7 of 9) 24905 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr5-33440853-1 chr5 33440753 33440953 0 9.720000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152295) promoter-TSS (NM_152295) 77 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding Merged-chr12-79375297-1 chr12 79375197 79375397 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001135806, intron 8 of 9) L2b|LINE|L2 -43960 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr10-9434189-1 chr10 9434089 9434289 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -138596 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr13-65571208-1 chr13 65571108 65571308 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -294839 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr1-186512265-1 chr1 186512165 186512365 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 -51157 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr10-12172503-1 chr10 12172403 12172603 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321648, intron 8 of 10) intron (NM_001321648, intron 8 of 10) -23459 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding Merged-chr10-9441821-1 chr10 9441721 9441921 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -146228 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr21-26114790-1 chr21 26114690 26114890 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 25600 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr15-84857982-1 chr15 84857882 84858082 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_020778, exon 6 of 14) exon (NM_020778, exon 6 of 14) -26679 NM_001321721 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding Merged-chr15-91002035-1 chr15 91001935 91002135 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018668, intron 18 of 22) intron (NM_018668, intron 18 of 22) -7384 NM_199413 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding Merged-chr12-82101298-1 chr12 82101198 82101398 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 147579 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr1-186383637-1 chr1 186383537 186383737 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001164246, intron 3 of 12) intron (NM_001164246, intron 3 of 12) 7879 NM_001164245 54953 Hs.371210 NM_017847 ENSG00000157181 C1orf27 ODR4|TTG1|odr-4 chromosome 1 open reading frame 27 protein-coding Merged-chr15-96581781-1 chr15 96581681 96581881 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 199873 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 -0 SPATA8 antisense RNA 1 (head to head) ncRNA Merged-chr9-83406112-1 chr9 83406012 83406212 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 61630 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr12-82299706-1 chr12 82299606 82299806 0 9.700000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 58714 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr15-92683657-1 chr15 92683557 92683757 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -27856 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr17-57663106-1 chr17 57663006 57663206 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138962, intron 11 of 13) intron (NM_138962, intron 11 of 13) -54694 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 -0 uncharacterized LOC101927539 ncRNA Merged-chr5-36242159-1 chr5 36242059 36242259 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001287340) promoter-TSS (NM_001287340) 120 NM_001287341 133686 Hs.81907 NM_153013 ENSG00000152620 NADK2 C5orf33|DECRD|MNADK|NADKD1 NAD kinase 2 mitochondrial protein-coding Merged-chr20-441429-1 chr20 441329 441529 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_111901, intron 5 of 9) intron (NR_111901, intron 5 of 9) 21124 NR_111901 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr15-99074801-1 chr15 99074701 99074901 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -30279 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr12-71040248-1 chr12 71040148 71040348 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 117751 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr21-41593068-1 chr21 41592968 41593168 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -84910 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr1-172143674-1 chr1 172143574 172143774 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_029618) TTS (NR_029618) 970 NR_029618 406977 NR_029618 ENSG00000208024 MIR199A2 MIR-199-s|MIRN199A2|mir-199a-2 microRNA 199a-2 ncRNA Merged-chr12-94954498-1 chr12 94954398 94954598 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49215 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr9-76647334-1 chr9 76647234 76647434 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330680, intron 3 of 10) L1MC1|LINE|L1 45081 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr12-57520606-1 chr12 57520506 57520706 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195057) promoter-TSS (NM_001195057) -89 NM_001195057 1649 Hs.505777 NM_004083 ENSG00000175197 DDIT3 CEBPZ|CHOP|CHOP-10|CHOP10|GADD153 DNA damage inducible transcript 3 protein-coding Merged-chr10-12170885-1 chr10 12170785 12170985 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001142627) TTS (NM_001142627) -25077 NM_006023 8872 Hs.412842 NM_006023 ENSG00000151465 CDC123 C10orf7|D123 cell division cycle 123 protein-coding Merged-chr12-48682321-1 chr12 48682221 48682421 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017822) promoter-TSS (NM_017822) -69 NM_017822 54934 Hs.505412 NM_017822 ENSG00000139620 KANSL2 C12orf41|NSL2 KAT8 regulatory NSL complex subunit 2 protein-coding Merged-chr15-92559287-1 chr15 92559187 92559387 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MB5|LINE|L1 12976 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr9-84568227-1 chr9 84568127 84568327 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -100231 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr1-185715212-1 chr1 185715112 185715312 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19339 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding Merged-chr5-1384140-1 chr5 1384040 1384240 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4067 NR_125810 100506791 Hs.146092 NR_125810 ENSG00000250584 LINC01511 -0 long intergenic non-protein coding RNA 1511 ncRNA Merged-chr1-186696176-1 chr1 186696076 186696276 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 15522 NR_125801 103752588 Hs.441636 NR_125801 ENSG00000273129 PACERR PACER|PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA ncRNA Merged-chr1-186365527-1 chr1 186365427 186365627 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003292, intron 4 of 50) Tigger2|DNA|TcMar-Tigger 9798 NM_003292 7175 Hs.279640 NM_003292 ENSG00000047410 TPR -0 translocated promoter region, nuclear basket protein protein-coding Merged-chr16-49782805-1 chr16 49782705 49782905 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015069, intron 2 of 7) intron (NM_015069, intron 2 of 7) 39933 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding Merged-chr16-84851366-1 chr16 84851266 84851466 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031476, intron 5 of 14) intron (NM_031476, intron 5 of 14) 31385 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding Merged-chr17-45148241-1 chr17 45148141 45148341 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 924 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 hexamethylene bisacetamide inducible 1 protein-coding Merged-chr13-75613845-1 chr13 75613745 75613945 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_120412, intron 1 of 1) L1MA3|LINE|L1 -6589 NM_005358 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LOMP LIM domain 7 protein-coding Merged-chr13-68908521-1 chr13 68908421 68908621 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MA3|LINE|L1 -23196 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 -0 long intergenic non-protein coding RNA 550 ncRNA Merged-chr9-83339567-1 chr9 83339467 83339667 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 5 of 13) intron (NM_174938, intron 5 of 13) -7606 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr10-3317074-1 chr10 3316974 3317174 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -1621 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr5-43313588-1 chr5 43313488 43313688 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324219) promoter-TSS (NM_001324219) -76 NM_001098272 3157 Hs.397729 NM_002130 ENSG00000112972 HMGCS1 HMGCS 3-hydroxy-3-methylglutaryl-CoA synthase 1 protein-coding Merged-chr13-65584276-1 chr13 65584176 65584376 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER67D|LTR|ERV1 -281771 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr16-49971875-1 chr16 49971775 49971975 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -53331 NM_153261 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding Merged-chr15-91038508-1 chr15 91038408 91038608 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR 15886 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 LOC101926911 -0 uncharacterized LOC101926911 ncRNA Merged-chr9-76291339-1 chr9 76291239 76291439 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001190482, intron 24 of 36) intron (NM_001190482, intron 24 of 36) 103189 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding Merged-chr10-12098021-1 chr10 12097921 12098121 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018706, intron 8 of 16) intron (NM_018706, intron 8 of 16) 29104 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding Merged-chr4-12625949-1 chr4 12625849 12626049 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA16|LINE|L1 402498 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr15-95581386-1 chr15 95581286 95581486 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR86B2|LTR|ERVL 148293 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr4-23897724-1 chr4 23897624 23897824 0 9.420000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -7647 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr4-28456237-1 chr4 28456137 28456337 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluSz|SINE|Alu -363345 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr12-70578750-1 chr12 70578650 70578850 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001109754, intron 10 of 33) intron (NM_001109754, intron 10 of 33) 31274 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr13-68826060-1 chr13 68825960 68826160 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA13|LINE|L1 59265 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 -0 long intergenic non-protein coding RNA 550 ncRNA Merged-chr1-170887435-1 chr1 170887335 170887535 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -48036 NM_001163629 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding Merged-chr21-26220821-1 chr21 26220721 26220921 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC2|LINE|L1 -49693 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr21-27282289-1 chr21 27282189 27282389 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic U6|snRNA|snRNA -315169 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr4-11929020-1 chr4 11928920 11929120 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16C|LTR|ERVL -294431 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr15-91925033-1 chr15 91924933 91925133 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 70733 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-92833578-1 chr15 92833478 92833678 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2D|LTR|ERVL 38094 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr1-186484978-1 chr1 186484878 186485078 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -23870 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr4-12710209-1 chr4 12710109 12710309 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1J1-int|LTR|ERVL-MaLR 486758 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr12-70240623-1 chr12 70240523 70240723 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120461, intron 3 of 4) L2a|LINE|L2 -2371 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr16-62986329-1 chr16 62986229 62986429 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -949494 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding Merged-chr13-103961948-1 chr13 103961848 103962048 0 9.370000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 536748 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA Merged-chr12-71095508-1 chr12 71095408 71095608 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1A0|LTR|ERVL-MaLR 62491 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding Merged-chr7-768285-1 chr7 768185 768385 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_075098, intron 8 of 12) CpG -40609 NM_001164759 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding Merged-chr15-92608699-1 chr15 92608599 92608799 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -36436 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr6-46689088-1 chr6 46688988 46689188 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134643) promoter-TSS (NR_134643) -923 NR_134643 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 -0 uncharacterized LOC101926934 ncRNA Merged-chr12-66136878-1 chr12 66136778 66136978 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001282606) TTS (NM_001282606) -6125 NM_032338 84298 Hs.504820 NM_032338 ENSG00000139233 LLPH C12orf31|hLLP LLP homolog, long-term synaptic facilitation protein-coding Merged-chr1-171213804-1 chr1 171213704 171213904 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 28596 NM_001460 2327 Hs.144912 NM_001460 ENSG00000094963 FMO2 FMO1B1 flavin containing monooxygenase 2 protein-coding Merged-chr15-85099628-1 chr15 85099528 85099728 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 9 of 21) intron (NM_002605, intron 9 of 21) 105659 NR_049748 642423 Hs.681665 NR_049748 LOC642423 -0 golgin A2 pseudogene pseudo Merged-chr4-12700415-1 chr4 12700315 12700515 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 476964 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr21-41568498-1 chr21 41568398 41568598 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -60340 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr15-92366254-1 chr15 92366154 92366354 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -27633 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr1-28236005-1 chr1 28235905 28236105 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178191) promoter-TSS (NM_178191) -86 NM_178190 93974 Hs.744914 NM_016311 ENSG00000130770 ATPIF1 ATPI|ATPIP|IP ATPase inhibitory factor 1 protein-coding Merged-chr12-71026556-1 chr12 71026456 71026656 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -105752 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr21-26181035-1 chr21 26180935 26181135 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT2B2|LTR|ERVL -9907 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr4-23938753-1 chr4 23938653 23938853 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -48676 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr1-181948759-1 chr1 181948659 181948859 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1C-int|LTR|ERVL-MaLR 112953 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 -0 zinc finger protein 648 protein-coding Merged-chr17-41688763-1 chr17 41688663 41688863 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005801) promoter-TSS (NM_005801) -112 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding Merged-chr4-23869020-1 chr4 23868920 23869120 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 12272 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr20-559517-1 chr20 559417 559617 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER20B|DNA|hAT-Charlie -15679 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr15-92519492-1 chr15 92519392 92519592 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 47815 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr15-98607975-1 chr15 98607875 98608075 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -40564 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding Merged-chr17-78822764-1 chr17 78822664 78822864 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321291, intron 6 of 20) intron (NM_001321291, intron 6 of 20) 17763 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding Merged-chr19-55461822-1 chr19 55461722 55461922 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001136201) promoter-TSS (NM_001136201) -140 NM_001136202 79763 Hs.467306 NM_024710 ENSG00000063241 ISOC2 -0 isochorismatase domain containing 2 protein-coding Merged-chr12-83167786-1 chr12 83167686 83167886 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 480631 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr1-23562477-1 chr1 23562377 23562577 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2683 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3 HLH protein protein-coding Merged-chr20-499012-1 chr20 498912 499112 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_177560, intron 4 of 11) intron (NM_177560, intron 4 of 11) -36459 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr15-84771844-1 chr15 84771744 84771944 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014630, intron 2 of 10) intron (NM_014630, intron 2 of 10) 23257 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding Merged-chr15-92787365-1 chr15 92787265 92787465 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -8119 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr15-91892900-1 chr15 91892800 91893000 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) MIR|SINE|MIR 38600 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-94982109-1 chr12 94982009 94982209 0 9.110000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258338, intron 2 of 2) LTR87|LTR|ERVL? 21604 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr4-28326646-1 chr4 28326546 28326746 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -492936 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-90906817-1 chr15 90906717 90906917 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001320977, exon 8 of 25) exon (NM_001320977, exon 8 of 25) 2627 NR_135504 4122 Hs.116459 NM_006122 ENSG00000196547 MAN2A2 MANA2X mannosidase alpha class 2A member 2 protein-coding Merged-chr1-172053179-1 chr1 172053079 172053279 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 10 of 20) L2c|LINE|L2 -85629 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr9-80005596-1 chr9 80005496 80005696 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_121212, intron 3 of 4) intron (NR_121212, intron 3 of 4) 30573 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr4-28202870-1 chr4 28202770 28202970 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16A|LTR|ERVL -616712 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr13-78876665-1 chr13 78876565 78876765 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR2752|LTR|ERV1 -36615 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA Merged-chr12-69976024-1 chr12 69975924 69976124 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 150701 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr9-76298029-1 chr9 76297929 76298129 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001190482, intron 27 of 36) intron (NM_001190482, intron 27 of 36) 96499 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding Merged-chr9-79981979-1 chr9 79981879 79982079 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_121212, intron 2 of 4) LTR101_Mam|LTR|ERVL 6956 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr9-83344707-1 chr9 83344607 83344807 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 4 of 13) MLT2B1|LTR|ERVL -12746 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr9-76796857-1 chr9 76796757 76796957 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) MLT2B4|LTR|ERVL 32421 NR_015342 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr21-26975314-1 chr21 26975214 26975414 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -8194 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr13-65480441-1 chr13 65480341 65480541 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -385606 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr9-84065662-1 chr9 84065562 84065762 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_110995, intron 1 of 8) intron (NR_110995, intron 1 of 8) 2219 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr4-11965355-1 chr4 11965255 11965455 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA9|LINE|L1 -258096 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr5-1338105-1 chr5 1338005 1338205 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_030782, intron 4 of 16) intron (NM_030782, intron 4 of 16) 6965 NM_030782 81037 Hs.444673 NM_030782 ENSG00000049656 CLPTM1L CRR9 CLPTM1 like protein-coding Merged-chr12-82191741-1 chr12 82191641 82191841 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA4|LINE|L1 166679 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr1-194890911-1 chr1 194890811 194891011 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LOR1-int|LTR|ERV1 1586166 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr9-84293891-1 chr9 84293791 84293991 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_022127, intron 10 of 18) intron (NM_022127, intron 10 of 18) 46888 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding Merged-chr13-90155367-1 chr13 90155267 90155467 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HERVL-int|LTR|ERVL -35650 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 -0 long intergenic non-protein coding RNA 559 ncRNA Merged-chr12-95034584-1 chr12 95034484 95034684 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001127362, intron 10 of 11) L1ME3G|LINE|L1 -30871 NM_001258338 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr15-98834571-1 chr15 98834471 98834671 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 50145 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 -0 microRNA 4714 ncRNA Merged-chr15-99335744-1 chr15 99335644 99335844 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321675, intron 6 of 9) intron (NM_001321675, intron 6 of 9) 78219 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr12-70706195-1 chr12 70706095 70706295 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002849, intron 6 of 13) intron (NM_002849, intron 6 of 13) 48413 NR_073474 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr16-49967854-1 chr16 49967754 49967954 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -57352 NM_153261 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding Merged-chr15-91942556-1 chr15 91942456 91942656 0 9.050000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) Charlie15a|DNA|hAT-Charlie 88256 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr4-12642004-1 chr4 12641904 12642104 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1D|LTR|ERVL-MaLR 418553 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr1-172166457-1 chr1 172166357 172166557 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) intron (NM_015569, intron 14 of 20) -21622 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr15-91934307-1 chr15 91934207 91934407 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) LTR40c|LTR|ERVL 80007 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-90970079-1 chr15 90969979 90970179 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_199413, intron 12 of 13) intron (NM_199413, intron 12 of 13) 3710 NR_051984 100507118 Hs.366401 NR_051984 ENSG00000258725 PRC1-AS1 -0 PRC1 antisense RNA 1 ncRNA Merged-chr15-92197816-1 chr15 92197716 92197916 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MamRep4096|DNA|hAT-Tip100 -196071 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr21-41476181-1 chr21 41476081 41476281 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005656, intron 8 of 13) intron (NM_005656, intron 8 of 13) 31884 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr15-92242464-1 chr15 92242364 92242564 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER47A|DNA|TcMar-Tigger -151423 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr21-27032045-1 chr21 27031945 27032145 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -64925 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr16-48582972-1 chr16 48582872 48583072 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153029, intron 1 of 6) AluJr|SINE|Alu 27237 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 -0 NEDD4 binding protein 1 protein-coding Merged-chr4-11949613-1 chr4 11949513 11949713 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR8A|LTR|ERV1 -273838 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr10-8933679-1 chr10 8933579 8933779 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1B|LTR|ERVL-MaLR 35690 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LOC105755953 -0 uncharacterized LOC105755953 ncRNA Merged-chrX-16870396-1 chrX 16870296 16870496 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198719) promoter-TSS (NM_001198719) 15 NM_002893 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7 chromatin remodeling factor protein-coding Merged-chr8-25458492-1 chr8 25458392 25458592 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017634) promoter-TSS (NM_017634) -24 NM_017634 54793 Hs.72071 NM_017634 ENSG00000104756 KCTD9 BTBD27 potassium channel tetramerization domain containing 9 protein-coding Merged-chr4-12646132-1 chr4 12646032 12646232 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 422681 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr17-63842928-1 chr17 63842828 63843028 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001098426) promoter-TSS (NM_001098426) 63 NM_001098426 6603 Hs.250581 NM_003077 ENSG00000108604 SMARCD2 BAF60B|CRACD2|PRO2451|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding Merged-chr1-109426519-1 chr1 109426419 109426619 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199774) promoter-TSS (NM_001199774) -33 NM_001199774 5686 Hs.485246 NM_002790 ENSG00000143106 PSMA5 PSC5|ZETA proteasome subunit alpha 5 protein-coding Merged-chr9-84568931-1 chr9 84568831 84569031 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1D|LTR|ERVL-MaLR -99527 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr17-49414961-1 chr17 49414861 49415061 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001281497) promoter-TSS (NM_001281497) -56 NM_002634 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding Merged-chr15-90984048-1 chr15 90983948 90984148 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_003981, exon 3 of 15) exon (NM_003981, exon 3 of 15) 10603 NM_001267580 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding Merged-chrX-16719517-1 chrX 16719417 16719617 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032796) promoter-TSS (NM_032796) -67 NR_033181 94056 Hs.744256 NM_032796 ENSG00000169895 SYAP1 PRO3113 synapse associated protein 1 protein-coding Merged-chr9-84585894-1 chr9 84585794 84585994 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -82564 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr15-92319937-1 chr15 92319837 92320037 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR79|LTR|ERVL -73950 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr17-67491217-1 chr17 67491117 67491317 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -19632 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA Merged-chr12-69969833-1 chr12 69969733 69969933 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 144510 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr15-96518805-1 chr15 96518705 96518905 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HAL1|LINE|L1 185465 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding Merged-chr1-188063862-1 chr1 188063762 188063962 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA15|LINE|L1 620234 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr12-96427432-1 chr12 96427332 96427532 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic 7SK|RNA|RNA -26844 NM_001170464 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding Merged-chr17-49678136-1 chr17 49678036 49678236 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001007226) promoter-TSS (NM_001007226) 27 NM_001007229 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding Merged-chr17-76872656-1 chr17 76872556 76872756 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_198955) promoter-TSS (NM_198955) 9 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B protein-coding Merged-chr19-5622964-1 chr19 5622864 5623064 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014649) promoter-TSS (NM_014649) -37 NM_014649 9667 Hs.655392 NM_014649 ENSG00000130254 SAFB2 -0 scaffold attachment factor B2 protein-coding Merged-chr9-113275545-1 chr9 113275445 113275645 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001322267) promoter-TSS (NM_001322267) 44 NM_139286 246184 Hs.727648 NM_139286 ENSG00000176386 CDC26 ANAPC12|APC12|C9orf17 cell division cycle 26 protein-coding Merged-chr17-44186795-1 chr17 44186695 44186895 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_049729) promoter-TSS (NR_049729) -78 NR_049729 339201 Hs.656564 NM_178542 ENSG00000267080 ASB16-AS1 C17orf65 ASB16 antisense RNA 1 ncRNA Merged-chr17-45093201-1 chr17 45093101 45093301 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021079, intron 3 of 11) intron (NM_021079, intron 3 of 11) 21232 NR_106842 102465470 NR_106842 ENSG00000277249 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA Merged-chr4-12568988-1 chr4 12568888 12569088 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic FRAM|SINE|Alu 345537 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-81588340-1 chr9 81588240 81588440 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005077, intron 16 of 19) intron (NM_005077, intron 16 of 19) 101195 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr21-26210884-1 chr21 26210784 26210984 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16E1|LTR|ERVL -39756 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr10-12507149-1 chr10 12507049 12507249 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) intron (NM_153498, intron 1 of 10) -71604 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr15-92329716-1 chr15 92329616 92329816 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -64171 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr12-69491600-1 chr12 69491500 69491700 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001278351, exon 2 of 11) 5' UTR (NM_001278351, exon 2 of 11) 21251 NM_001278355 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding Merged-chr15-90863567-1 chr15 90863467 90863667 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -5025 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr1-171928325-1 chr1 171928225 171928425 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 2 of 20) L1PA12|LINE|L1 64133 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr17-77477586-1 chr17 77477486 77477686 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001113495, intron 1 of 9) intron (NM_001113495, intron 1 of 9) 2343 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr15-85007953-1 chr15 85007853 85008053 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 25979 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr10-63712468-1 chr10 63712368 63712568 0 8.810000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -190393 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding Merged-chrX-13653074-2 chrX 13652953 13653195 0 8.795000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001297563) promoter-TSS (NM_001297563) -32 NM_001297564 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC -0 transcription elongation factor A N-terminal and central domain containing protein-coding Merged-chr21-26973279-1 chr21 26973179 26973379 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6159 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr4-12620082-1 chr4 12619982 12620182 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16E1|LTR|ERVL 396631 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr4-12619098-1 chr4 12618998 12619198 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 395647 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr4-11913096-1 chr4 11912996 11913196 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2B3|LTR|ERVL -310355 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr20-596797-1 chr20 596697 596897 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 13469 NM_004609 6939 Hs.437 NM_004609 ENSG00000125878 TCF15 EC2|PARAXIS|bHLHa40 transcription factor 15 (basic helix-loop-helix) protein-coding Merged-chr12-70357254-1 chr12 70357154 70357354 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L3b|LINE|CR1 -9028 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr5-933386-1 chr5 933286 933486 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 40532 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr15-92304874-1 chr15 92304774 92304974 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -89013 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr4-12721382-1 chr4 12721282 12721482 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 497931 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr15-92594215-1 chr15 92594115 92594315 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME4a|LINE|L1 -21952 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr1-194848990-1 chr1 194848890 194849090 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 1544245 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA Merged-chr21-41618511-1 chr21 41618411 41618611 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -60791 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr4-11933847-1 chr4 11933747 11933947 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT2B1|LTR|ERVL -289604 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr15-92560756-1 chr15 92560656 92560856 0 8.730000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F1|LTR|ERVL-MaLR 11507 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr1-27112248-2 chr1 27112099 27112397 0 8.520000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_046474, intron 1 of 10) intron (NR_046474, intron 1 of 10) 42882 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding Merged-chr9-76612410-1 chr9 76612310 76612510 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_131751, exon 16 of 16) non-coding (NR_131751, exon 16 of 16) 80005 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr14-91060908-1 chr14 91060808 91061008 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001322238) promoter-TSS (NM_001322238) -259 NM_004755 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding Merged-chr22-36776391-1 chr22 36776291 36776491 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001177701) promoter-TSS (NM_001177701) -258 NR_033531 11020 Hs.415172 NM_006860 ENSG00000100360 IFT27 BBS19|RABL4|RAYL intraflagellar transport 27 protein-coding Merged-chr15-92486272-1 chr15 92486172 92486372 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301106, intron 2 of 2) MLT1I|LTR|ERVL-MaLR 14595 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr12-94948214-1 chr12 94948114 94948314 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER20|DNA|hAT-Charlie 55499 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr5-914962-1 chr5 914862 915062 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004237, intron 11 of 12) intron (NM_004237, intron 11 of 12) 22108 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr6-46737598-1 chr6 46737498 46737698 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -1905 NM_001168357 7941 Hs.584823 NM_005084 ENSG00000146070 PLA2G7 LDL-PLA2|LP-PLA2|PAFAD|PAFAH phospholipase A2 group VII protein-coding Merged-chr13-65412165-1 chr13 65412065 65412265 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -453882 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr11-13216542-1 chr11 13216442 13216642 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -61185 NM_001030273 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding Merged-chr15-92328576-1 chr15 92328476 92328676 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Charlie22a|DNA|hAT-Charlie -65311 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr21-41598698-1 chr21 41598598 41598798 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1D|LTR|ERVL-MaLR -80604 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr9-84089694-1 chr9 84089594 84089794 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110995, intron 7 of 8) Tigger1|DNA|TcMar-Tigger 26251 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr9-79973077-1 chr9 79972977 79973177 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) -1946 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr5-108748859-1 chr5 108748759 108748959 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001308028) promoter-TSS (NM_001308028) -68 NM_001308038 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding Merged-chr7-4745068-1 chr7 4744968 4745168 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001037165, intron 2 of 8) intron (NM_001037165, intron 2 of 8) -30563 NM_014855 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 zeta 1 subunit protein-coding Merged-chr17-75289555-1 chr17 75289455 75289655 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001126122) promoter-TSS (NM_001126122) -106 NM_001126121 60386 Hs.514470 NM_021734 ENSG00000125454 SLC25A19 DNC|MCPHA|MUP1|THMD3|THMD4|TPC solute carrier family 25 member 19 protein-coding Merged-chr5-134877369-1 chr5 134877269 134877469 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024715, intron 1 of 4) L2b|LINE|L2 3599 NM_024715 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding Merged-chr21-26201997-1 chr21 26201897 26202097 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -30869 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr17-41930492-1 chr17 41930392 41930592 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031421) promoter-TSS (NM_031421) -131 NR_110662 83538 Hs.201134 NM_031421 ENSG00000204815 TTC25 CILD35 tetratricopeptide repeat domain 25 protein-coding Merged-chr15-92496406-1 chr15 92496306 92496506 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301106, intron 2 of 2) intron (NM_001301106, intron 2 of 2) 24729 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr21-41582052-1 chr21 41581952 41582152 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -73894 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr10-12510656-1 chr10 12510556 12510756 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) intron (NM_153498, intron 1 of 10) -68097 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr17-63622124-1 chr17 63622024 63622224 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002401) promoter-TSS (NM_002401) -301 NM_001330431 4215 Hs.29282 NM_002401 ENSG00000198909 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding Merged-chr9-76658718-1 chr9 76658618 76658818 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 8 of 15) intron (NR_131751, intron 8 of 15) 33697 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr9-84602857-1 chr9 84602757 84602957 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -65601 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr12-70367052-1 chr12 70366952 70367152 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_014505, exon 1 of 3) exon (NM_014505, exon 1 of 3) 770 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr12-71028784-1 chr12 71028684 71028884 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -107980 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase, receptor type R protein-coding Merged-chr19-7903628-1 chr19 7903528 7903728 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001297556) promoter-TSS (NM_001297556) -152 NM_001297555 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding Merged-chr12-70108585-1 chr12 70108485 70108685 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MA4A|LINE|L1 -134409 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr1-67685154-1 chr1 67685054 67685254 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001924) promoter-TSS (NM_001924) -23 NM_001199741 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding Merged-chr5-37371143-1 chr5 37371043 37371243 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004298) promoter-TSS (NM_004298) -17 NM_001278312 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding Merged-chr21-41580451-1 chr21 41580351 41580551 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -72293 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr1-2586509-1 chr1 2586409 2586609 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036637) promoter-TSS (NR_036637) 49 NR_036638 127281 Hs.462033 NM_152371 ENSG00000157870 FAM213B C1orf93 family with sequence similarity 213 member B protein-coding Merged-chr1-31065802-1 chr1 31065702 31065902 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001020658) promoter-TSS (NM_001020658) -85 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1 pumilio RNA binding family member 1 protein-coding Merged-chr15-90868327-1 chr15 90868227 90868427 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002569) promoter-TSS (NM_002569) -265 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding Merged-chr15-92415738-1 chr15 92415638 92415838 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) MER102c|DNA|hAT-Charlie 21828 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr12-84161488-1 chr12 84161388 84161588 0 8.500000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 751341 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr21-26249529-1 chr21 26249429 26249629 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluSz6|SINE|Alu -78401 NM_001136131 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2 amyloid beta precursor protein protein-coding Merged-chr15-92599703-1 chr15 92599603 92599803 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -27440 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr12-95066322-1 chr12 95066222 95066422 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001127362, intron 2 of 11) AluJo|SINE|Alu 7306 NM_003297 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding Merged-chr12-79360998-1 chr12 79360898 79361098 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001135806, intron 8 of 9) intron (NM_001135806, intron 8 of 9) -58259 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA Merged-chr13-90282390-1 chr13 90282290 90282490 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 51208 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr15-92709806-1 chr15 92709706 92709906 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -54005 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr1-171829964-1 chr1 171829864 171830064 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -11514 NM_001278252 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding Merged-chr4-23863220-1 chr4 23863120 23863320 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) L2a|LINE|L2 18072 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr12-83696108-1 chr12 83696008 83696208 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR12C|LTR|ERV1 1008953 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr15-98708619-1 chr15 98708519 98708719 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -57398 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA Merged-chr15-91925612-1 chr15 91925512 91925712 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 71312 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr10-10814548-1 chr10 10814448 10814648 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001326326, intron 1 of 14) intron (NM_001326326, intron 1 of 14) 15837 NM_001326327 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP, Elav-like family member 2 protein-coding Merged-chr1-172050229-1 chr1 172050129 172050329 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 10 of 20) intron (NM_015569, intron 10 of 20) -88579 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr10-8611322-1 chr10 8611222 8611422 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME3B|LINE|L1 -16931 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr1-172173968-1 chr1 172173868 172174068 0 8.400000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) intron (NM_015569, intron 14 of 20) -29133 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr17-48892547-2 chr17 48892434 48892660 0 8.299999 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001002027) promoter-TSS (NM_001002027) -239 NM_001002027 516 Hs.80986 NM_005175 ENSG00000159199 ATP5G1 ATP5A|ATP5G ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9) protein-coding Merged-chr17-59707497-2 chr17 59707341 59707654 0 8.285000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001329394) promoter-TSS (NM_001329394) 32 NM_001329397 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding Merged-chr1-27773133-1 chr1 27773033 27773233 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_177424) promoter-TSS (NM_177424) -50 NM_177424 23673 Hs.523855 NM_177424 ENSG00000117758 STX12 STX13|STX14 syntaxin 12 protein-coding Merged-chr15-92809359-1 chr15 92809259 92809459 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 13875 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr9-81562944-1 chr9 81562844 81563044 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 126591 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr13-90314584-1 chr13 90314484 90314684 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (AC)n|Simple_repeat|Simple_repeat 83402 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr4-24174768-1 chr4 24174668 24174868 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) intron (NM_001330751, intron 2 of 14) -284691 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr9-76759977-1 chr9 76759877 76760077 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 5 of 15) LTR1F1|LTR|ERV1 -4459 NR_132312 50652 Hs.663766 NR_015342 ENSG00000225937 PCA3 DD3|NCRNA00019|PCAT3 prostate cancer associated 3 (non-protein coding) ncRNA Merged-chr15-99285338-1 chr15 99285238 99285438 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321675, intron 3 of 9) intron (NM_001321675, intron 3 of 9) 27813 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2 pseudogene pseudo Merged-chr1-6785141-1 chr1 6785041 6785241 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195563) promoter-TSS (NM_001195563) -183 NM_015215 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding Merged-chr5-69093930-1 chr5 69093830 69094030 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001251969) promoter-TSS (NM_001251969) -19 NM_001251969 64924 Hs.631975 NM_022902 ENSG00000145740 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 member 5 protein-coding Merged-chr17-48972534-1 chr17 48972434 48972634 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3941 NM_004123 2695 Hs.1454 NM_004123 ENSG00000159224 GIP -0 gastric inhibitory polypeptide protein-coding Merged-chr1-19596926-1 chr1 19596826 19597026 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001032363) promoter-TSS (NM_001032363) -51 NM_001032363 440574 Hs.466662 NM_001032363 ENSG00000173436 MINOS1 C1orf151|MIO10|Mic10 mitochondrial inner membrane organizing system 1 protein-coding Merged-chr17-81860979-1 chr17 81860879 81861079 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000918) promoter-TSS (NM_000918) -311 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding Merged-chr4-39182390-1 chr4 39182290 39182490 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317924) promoter-TSS (NM_001317924) -14 NM_025132 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding Merged-chr17-76252155-1 chr17 76252055 76252255 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11844 NM_001330501 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 -0 ring finger protein 157 protein-coding Merged-chr4-8234996-1 chr4 8234896 8235096 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 12 of 14) intron (NR_134639, intron 12 of 14) -34769 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding Merged-chr21-27043323-1 chr21 27043223 27043423 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -76203 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr14-63543484-1 chr14 63543384 63543584 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_104104) promoter-TSS (NR_104104) -123 NM_006246 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E -0 protein phosphatase 2 regulatory subunit B'epsilon protein-coding Merged-chr15-91876736-1 chr15 91876636 91876836 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 22436 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-92269941-1 chr15 92269841 92270041 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -123946 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr17-50178613-1 chr17 50178513 50178713 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR -6137 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo Merged-chr16-9091488-1 chr16 9091388 9091588 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014117) promoter-TSS (NM_014117) -192 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding Merged-chr13-68940622-1 chr13 68940522 68940722 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -55297 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 -0 long intergenic non-protein coding RNA 550 ncRNA Merged-chr1-170074712-1 chr1 170074612 170074812 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001204514) promoter-TSS (NM_001204514) 26 NM_014970 22920 Hs.433442 NM_014970 ENSG00000075945 KIFAP3 FLA3|KAP-1|KAP-3|KAP3|SMAP|Smg-GDS|dJ190I16.1 kinesin associated protein 3 protein-coding Merged-chr20-487104-1 chr20 487004 487204 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_177560, intron 10 of 11) intron (NM_177560, intron 10 of 11) -24551 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr17-18039341-1 chr17 18039241 18039441 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145691) promoter-TSS (NM_145691) 44 NM_024052 79018 Hs.187422 NM_024052 ENSG00000141034 GID4 C17orf39|VID24 GID complex subunit 4 homolog protein-coding Merged-chr1-43650010-1 chr1 43649910 43650110 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014663) promoter-TSS (NM_014663) -116 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding Merged-chr17-59155510-1 chr17 59155410 59155610 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100595) promoter-TSS (NM_001100595) 11 NM_018304 55771 Hs.631750 NM_018304 ENSG00000068489 PRR11 -0 proline rich 11 protein-coding Merged-chr9-84559336-1 chr9 84559236 84559436 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR78|LTR|ERV1 -109122 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr9-89311045-1 chr9 89310945 89311145 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001827) promoter-TSS (NM_001827) -150 NM_001827 1164 Hs.83758 NM_001827 ENSG00000123975 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding Merged-chr12-55973929-1 chr12 55973829 55974029 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001252036) promoter-TSS (NM_001252036) 16 NM_001252036 5869 Hs.157659 NM_002868 ENSG00000111540 RAB5B -0 RAB5B, member RAS oncogene family protein-coding Merged-chr15-92370365-1 chr15 92370265 92370465 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR -23522 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr17-81095205-1 chr17 81095105 81095305 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006340, intron 6 of 14) intron (NM_006340, intron 6 of 14) 30168 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA Merged-chr10-6275369-1 chr10 6275269 6275469 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -51175 NR_040079 399715 NR_040079 ENSG00000215244 LOC399715 -0 uncharacterized LOC399715 ncRNA Merged-chr4-8232750-1 chr4 8232650 8232850 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 11 of 14) intron (NR_134639, intron 11 of 14) 33506 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr17-68378370-1 chr17 68378270 68378470 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001267727, intron 8 of 11) intron (NM_001267727, intron 8 of 11) -35253 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding Merged-chr10-118755247-1 chr10 118755147 118755347 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153810) promoter-TSS (NM_153810) -1 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding Merged-chr1-193059502-1 chr1 193059402 193059602 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015984) promoter-TSS (NM_015984) 80 NM_001331020 6738 Hs.288178 NM_004600 ENSG00000116747 TROVE2 RO60|RORNP|SSA2 TROVE domain family member 2 protein-coding Merged-chr15-90774390-1 chr15 90774290 90774490 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001287248, intron 12 of 21) L1MB7|LINE|L1 57063 NM_001287246 641 Hs.725208 NM_000057 ENSG00000197299 BLM BS|RECQ2|RECQL2|RECQL3 Bloom syndrome RecQ like helicase protein-coding Merged-chr12-70330870-1 chr12 70330770 70330970 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_037615, intron 7 of 16) intron (NR_037615, intron 7 of 16) -35412 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr15-99059182-1 chr15 99059082 99059282 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 44478 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 -0 leukemia-associated non-coding IGF1R activator RNA 1 ncRNA Merged-chr15-91947306-1 chr15 91947206 91947406 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 93006 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr9-76296151-1 chr9 76296051 76296251 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001190482, intron 26 of 36) FRAM|SINE|Alu 98377 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding Merged-chr5-35617841-1 chr5 35617741 35617941 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144722) promoter-TSS (NM_144722) -46 NM_144722 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding Merged-chr9-76586678-1 chr9 76586578 76586778 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 86045 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 core 2 protein-coding Merged-chr12-78734710-1 chr12 78734610 78734810 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -129283 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 P65|SVP65|SYT synaptotagmin 1 protein-coding Merged-chr15-91942818-1 chr15 91942718 91942918 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) AluSz|SINE|Alu 88518 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr17-21287983-1 chr17 21287883 21288083 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002756) promoter-TSS (NM_002756) -53 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Merged-chr1-28882315-1 chr1 28882215 28882415 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4776 NM_001166005 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding Merged-chr13-65450979-1 chr13 65450879 65451079 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluSx|SINE|Alu -415068 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 -0 long intergenic non-protein coding RNA 1052 ncRNA Merged-chr17-42609453-1 chr17 42609353 42609553 0 8.200000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178126) promoter-TSS (NM_178126) -26 NM_178126 162427 Hs.632262 NM_178126 ENSG00000141699 FAM134C -0 family with sequence similarity 134 member C protein-coding Merged-chr12-84299991-1 chr12 84299891 84300091 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 612838 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr15-92507613-1 chr15 92507513 92507713 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1M5|LINE|L1 35936 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr4-23860269-1 chr4 23860169 23860369 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) AluJr|SINE|Alu 21023 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr13-73131373-1 chr13 73131273 73131473 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 72581 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding Merged-chr4-28246830-1 chr4 28246730 28246930 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR -572752 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-85071969-1 chr15 85071869 85072069 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002605, intron 3 of 21) intron (NM_002605, intron 3 of 21) 89995 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr10-7908234-1 chr10 7908134 7908334 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) MER102b|DNA|hAT-Charlie 89730 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr12-70597412-1 chr12 70597312 70597512 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330204, intron 4 of 32) intron (NM_001330204, intron 4 of 32) 12612 NM_002837 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr4-8156512-1 chr4 8156412 8156612 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001130088, intron 1 of 13) intron (NM_001130088, intron 1 of 13) 2320 NM_001130083 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 -0 actin binding LIM protein family member 2 protein-coding Merged-chr15-92317276-1 chr15 92317176 92317376 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -76611 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr13-74088390-1 chr13 74088290 74088490 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007249, intron 1 of 7) AluSz|SINE|Alu 45539 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr21-41568981-1 chr21 41568881 41569081 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -60823 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr15-98598610-1 chr15 98598510 98598710 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -49929 NM_000875 3480 Hs.643120 NM_000875 ENSG00000140443 IGF1R CD221|IGFIR|IGFR|JTK13 insulin like growth factor 1 receptor protein-coding Merged-chr12-70328123-1 chr12 70328023 70328223 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_037615, intron 5 of 16) intron (NR_037615, intron 5 of 16) -38159 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr12-84345072-1 chr12 84344972 84345172 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA16|LINE|L1 567757 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr15-99074069-1 chr15 99073969 99074169 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -31011 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr20-505150-1 chr20 505050 505250 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001895, exon 3 of 13) exon (NM_001895, exon 3 of 13) 38688 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr1-186523947-1 chr1 186523847 186524047 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic THE1D-int|LTR|ERVL-MaLR -62839 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding Merged-chr15-92495021-1 chr15 92494921 92495121 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001301106, intron 2 of 2) intron (NM_001301106, intron 2 of 2) 23344 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr10-9544494-1 chr10 9544394 9544594 0 8.080000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER65-int|LTR|ERV1 -248901 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 -0 uncharacterized LOC101928272 ncRNA Merged-chr21-25926078-1 chr21 25925978 25926178 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136131, intron 11 of 15) intron (NM_001136131, intron 11 of 15) -190424 NM_001685 522 Hs.246310 NM_001685 ENSG00000154723 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 protein-coding Merged-chr9-83404111-1 chr9 83404011 83404211 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) 63631 NM_001244960 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr12-2890753-1 chr12 2890653 2890853 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001160408) promoter-TSS (NM_001160408) -114 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 tubby like protein 3 protein-coding Merged-chr17-38752604-1 chr17 38752504 38752704 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002795) promoter-TSS (NM_002795) -109 NR_104194 5691 Hs.82793 NM_002795 ENSG00000277791 PSMB3 HC10-II proteasome subunit beta 3 protein-coding Merged-chr4-11939798-1 chr4 11939698 11939898 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1ME1|LINE|L1 -283653 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr14-103334106-1 chr14 103334006 103334206 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_183004) promoter-TSS (NM_183004) 104 NM_001969 1983 Hs.433702 NM_001969 ENSG00000100664 EIF5 EIF-5|EIF-5A eukaryotic translation initiation factor 5 protein-coding Merged-chr4-28280635-1 chr4 28280535 28280735 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PB1|LINE|L1 -538947 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr4-83035061-1 chr4 83034961 83035161 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001258006) promoter-TSS (NM_001258006) -25 NM_016129 51138 Hs.190384 NM_016129 ENSG00000138663 COPS4 CSN4|SGN4 COP9 signalosome subunit 4 protein-coding Merged-chr15-91075172-1 chr15 91075072 91075272 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24416 NM_001323031 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding Merged-chr15-92406279-1 chr15 92406179 92406379 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) MER5A|DNA|hAT-Charlie 12369 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr12-84255987-1 chr12 84255887 84256087 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 656842 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr3-129440209-1 chr3 129440109 129440309 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001276270) promoter-TSS (NM_001276270) -30 NM_001276272 8930 Hs.35947 NM_003925 ENSG00000129071 MBD4 MED1 methyl-CpG binding domain 4 DNA glycosylase protein-coding Merged-chr3-179562824-1 chr3 179562724 179562924 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004301) promoter-TSS (NM_004301) -56 NM_004301 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding Merged-chr1-172155676-1 chr1 172155576 172155776 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) L2c|LINE|L2 -10841 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr9-80026794-1 chr9 80026694 80026894 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_121212, intron 3 of 4) L1MB3|LINE|L1 51771 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr6-144095764-1 chr6 144095664 144095864 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031287) promoter-TSS (NM_031287) -147 NM_031287 83443 Hs.110695 NM_031287 ENSG00000169976 SF3B5 SF3b10|Ysf3 splicing factor 3b subunit 5 protein-coding Merged-chr1-225735974-1 chr1 225735874 225736074 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -41839 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding Merged-chr5-138575829-1 chr5 138575729 138575929 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004134) promoter-TSS (NM_004134) -200 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding Merged-chr17-8154475-1 chr17 8154375 8154575 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2040 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian clock 1 protein-coding Merged-chr12-108838581-1 chr12 108838481 108838681 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001161330, intron 2 of 13) intron (NM_001161330, intron 2 of 13) -1575 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA Merged-chr15-89088041-1 chr15 89087941 89088141 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007011) promoter-TSS (NM_007011) -109 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding Merged-chr15-95729878-1 chr15 95729778 95729978 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16A|LTR|ERVL 296785 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 -0 long intergenic non-protein coding RNA 924 ncRNA Merged-chr15-92422804-1 chr15 92422704 92422904 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) intron (NM_001330416, intron 1 of 4) 28894 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr16-19555484-1 chr16 19555384 19555584 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300743) promoter-TSS (NM_001300743) 69 NM_020314 57020 Hs.654964 NM_020314 ENSG00000103544 C16orf62 -0 chromosome 16 open reading frame 62 protein-coding Merged-chr5-134892929-1 chr5 134892829 134893029 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024715, intron 2 of 4) Tigger1|DNA|TcMar-Tigger -12191 NM_032151 84105 Hs.710014 NM_032151 ENSG00000132570 PCBD2 DCOH2|DCOHM|PHS2 pterin-4 alpha-carbinolamine dehydratase 2 protein-coding Merged-chr15-92609896-1 chr15 92609796 92609996 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -37633 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr6-30752527-1 chr6 30752427 30752627 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7977 NM_003897 8870 Hs.76095 NM_003897 ENSG00000137331 IER3 DIF-2|DIF2|GLY96|IEX-1|IEX-1L|IEX1|PRG1 immediate early response 3 protein-coding Merged-chr4-11923588-1 chr4 11923488 11923688 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -299863 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr20-508575-1 chr20 508475 508675 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001895, exon 2 of 13) 5' UTR (NM_001895, exon 2 of 13) 35263 NM_177560 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr17-76716355-1 chr17 76716255 76716455 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001081461, exon 7 of 7) 3' UTR (NM_001081461, exon 7 of 7) -5350 NM_001008528 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 PS1TP1|TMAP1 matrix remodeling associated 7 protein-coding Merged-chr15-92336171-1 chr15 92336071 92336271 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -57716 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr1-185157071-1 chr1 185156971 185157171 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001202423) promoter-TSS (NM_001202423) 11 NM_001105518 54823 Hs.134183 NM_017673 ENSG00000116668 SWT1 C1orf26|HsSwt1 SWT1, RNA endoribonuclease homolog protein-coding Merged-chr3-172153452-1 chr3 172153352 172153552 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 112898 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding Merged-chr12-70335053-1 chr12 70334953 70335153 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_037615, intron 8 of 16) intron (NR_037615, intron 8 of 16) -31229 NM_014505 27345 Hs.525529 NM_014505 ENSG00000135643 KCNMB4 -0 potassium calcium-activated channel subfamily M regulatory beta subunit 4 protein-coding Merged-chr12-82204500-1 chr12 82204400 82204600 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HERVL-int|LTR|ERVL 153920 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr18-80010405-1 chr18 80010305 80010505 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001305564, intron 1 of 2) LTR25|LTR|ERV1 -21813 NR_131175 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding Merged-chr19-19063826-1 chr19 19063726 19063926 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178526) promoter-TSS (NM_178526) -135 NM_001321544 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 -0 solute carrier family 25 member 42 protein-coding Merged-chr13-61606987-1 chr13 61606887 61607087 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MSTB-int|LTR|ERVL-MaLR -179041 NR_134946 101926951 Hs.732367 NR_134946 ENSG00000279797 LOC101926951 -0 uncharacterized LOC101926951 ncRNA Merged-chr5-35313498-1 chr5 35313398 35313598 0 7.900000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -82909 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|hPRLrI prolactin receptor protein-coding Merged-chr1-171854860-1 chr1 171854760 171854960 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 1 of 20) AluSx1|SINE|Alu -9332 NR_046845 100874284 NR_046845 ENSG00000233540 DNM3-IT1 -0 DNM3 intronic transcript 1 ncRNA Merged-chr4-28298985-1 chr4 28298885 28299085 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MCa|LINE|L1 -520597 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr15-92344432-1 chr15 92344332 92344532 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -49455 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr9-81584446-1 chr9 81584346 81584546 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005077, intron 19 of 19) intron (NM_005077, intron 19 of 19) 105089 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr12-57689580-1 chr12 57689480 57689680 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluJo|SINE|Alu -4375 NM_001017956 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9, endoplasmic reticulum lectin protein-coding Merged-chr10-12087044-1 chr10 12086944 12087144 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018706, intron 3 of 16) intron (NM_018706, intron 3 of 16) 18127 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding Merged-chr9-80040304-1 chr9 80040204 80040404 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 65281 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA Merged-chr5-918521-1 chr5 918421 918621 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_004237) TTS (NM_004237) 25667 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr15-90940005-1 chr15 90939905 90940105 0 7.760000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001323619, intron 6 of 20) L2b|LINE|L2 5119 NM_018671 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr17-62066067-2 chr17 62065961 62066173 0 7.625000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_005121) promoter-TSS (NM_005121) -785 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding Merged-chr1-9428996-2 chr1 9428858 9429135 0 7.620000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_104623) promoter-TSS (NR_104623) 0 NR_104622 100506022 Hs.131775 NR_104622 LOC100506022 -0 uncharacterized LOC100506022 ncRNA Merged-chr17-45317457-2 chr17 45317300 45317614 0 7.605000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003954) promoter-TSS (NM_003954) -393 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding Merged-chr17-64145822-1 chr17 64145722 64145922 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_004380) promoter-TSS (NR_004380) -148 NR_132278 105376843 Hs.405444 NR_132278 ENSG00000266402 SNHG25 -0 small nucleolar RNA host gene 25 ncRNA Merged-chr10-12496126-1 chr10 12496026 12496226 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) intron (NM_153498, intron 1 of 10) -82627 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr17-69655047-1 chr17 69654947 69655147 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 61060 NR_109972 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 -0 long intergenic non-protein coding RNA 1483 ncRNA Merged-chr4-28256798-1 chr4 28256698 28256898 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR38B|LTR|ERV1 -562784 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr17-39461411-1 chr17 39461311 39461511 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015083) promoter-TSS (NM_015083) -100 NM_016507 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding Merged-chr3-128879495-1 chr3 128879395 128879595 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014049) promoter-TSS (NM_014049) 5 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 NPD002 acyl-CoA dehydrogenase family member 9 protein-coding Merged-chr21-37267520-1 chr21 37267420 37267620 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006052) promoter-TSS (NM_006052) 12 NM_006052 10311 Hs.369488 NM_006052 ENSG00000157538 DSCR3 DCRA|DSCRA DSCR3 arrestin fold containing protein-coding Merged-chr17-75784672-1 chr17 75784572 75784772 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038131) promoter-TSS (NR_038131) -65 NR_039892 100616282 NR_039892 ENSG00000132475 MIR4738 -0 microRNA 4738 ncRNA Merged-chr4-165327508-1 chr4 165327408 165327608 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006745) promoter-TSS (NM_006745) -158 NM_001017369 6307 Hs.105269 NM_006745 ENSG00000052802 MSMO1 DESP4|ERG25|MCCPD|SC4MOL methylsterol monooxygenase 1 protein-coding Merged-chr22-36388220-1 chr22 36388120 36388320 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002473) promoter-TSS (NM_002473) -153 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding Merged-chr15-99050990-1 chr15 99050890 99051090 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 36286 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 -0 leukemia-associated non-coding IGF1R activator RNA 1 ncRNA Merged-chr12-83872227-1 chr12 83872127 83872327 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1P1|LINE|L1 1040602 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr1-171461692-1 chr1 171461592 171461792 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -23835 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding Merged-chrX-19710313-1 chrX 19710213 19710413 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024666, intron 2 of 16) MER44D|DNA|TcMar-Tigger -39312 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3 domain containing kinase binding protein 1 protein-coding Merged-chr16-58629987-1 chr16 58629887 58630087 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -101 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding Merged-chr1-22832240-1 chr1 22832140 22832340 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001309192, intron 3 of 13) MIRb|SINE|MIR 30986 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 -0 microRNA 4253 ncRNA Merged-chr3-128680768-1 chr3 128680668 128680868 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -29892 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding Merged-chr5-140401701-1 chr5 140401601 140401801 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001197030) promoter-TSS (NM_001197030) -113 NM_001197030 54882 Hs.594084 NM_017747 ENSG00000131503 ANKHD1 MASK|MASK1|PP2500|VBARP ankyrin repeat and KH domain containing 1 protein-coding Merged-chr17-45135491-1 chr17 45135391 45135591 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135705) promoter-TSS (NM_001135705) -156 NM_001135707 79777 Hs.110298 NM_024722 ENSG00000181513 ACBD4 HMFT0700 acyl-CoA binding domain containing 4 protein-coding Merged-chr17-75035366-1 chr17 75035266 75035466 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110835, intron 3 of 7) intron (NR_110835, intron 3 of 7) 2799 NR_110835 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 -0 potassium channel tetramerization domain containing 2 protein-coding Merged-chr10-3311680-1 chr10 3311580 3311780 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7015 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr15-91898250-1 chr15 91898150 91898350 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 43950 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr1-27557482-1 chr1 27557382 27557582 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001029882, intron 3 of 6) intron (NM_001029882, intron 3 of 6) 46012 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding Merged-chr10-32980634-1 chr10 32980534 32980734 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -22269 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding Merged-chr1-30824099-1 chr1 30823999 30824199 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -66263 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding Merged-chr1-26432187-1 chr1 26432087 26432287 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243564) promoter-TSS (NM_001243564) -95 NM_001243565 79947 Hs.369385 NM_024887 ENSG00000117682 DHDDS CIT|CPT|DS|HDS|RP59 dehydrodolichyl diphosphate synthase subunit protein-coding Merged-chr1-54053384-1 chr1 54053284 54053484 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001305043) promoter-TSS (NM_001305043) 54 NM_001305066 9528 Hs.118947 NM_004872 ENSG00000116209 TMEM59 C1orf8|DCF1|HSPC001|PRO195|UNQ169 transmembrane protein 59 protein-coding Merged-chr16-18801723-1 chr16 18801623 18801823 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015161) promoter-TSS (NM_015161) -45 NM_015161 23204 Hs.634882 NM_015161 ENSG00000170540 ARL6IP1 AIP1|ARL6IP|ARMER|SPG61 ADP ribosylation factor like GTPase 6 interacting protein 1 protein-coding Merged-chr17-81395250-1 chr17 81395150 81395350 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -4471 NM_001291324 57597 Hs.514580 NM_024696 ENSG00000266074 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding Merged-chr19-18008131-1 chr19 18008031 18008231 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286826) promoter-TSS (NM_001286826) -37 NM_015683 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding Merged-chr2-219279229-1 chr2 219279129 219279329 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001039550) promoter-TSS (NM_001039550) -89 NM_001039550 3300 Hs.77768 NM_006736 ENSG00000135924 DNAJB2 CMT2T|DSMA5|HSJ-1|HSJ1|HSPF3 DnaJ heat shock protein family (Hsp40) member B2 protein-coding Merged-chr1-27418556-1 chr1 27418456 27418656 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006990, intron 3 of 8) intron (NM_006990, intron 3 of 8) 25912 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding Merged-chr10-14838194-1 chr10 14838094 14838294 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001029954) promoter-TSS (NM_001029954) 34 NR_103464 51182 Hs.534169 NM_016299 ENSG00000187522 HSPA14 HSP70-4|HSP70L1 heat shock protein family A (Hsp70) member 14 protein-coding Merged-chr9-127579209-1 chr9 127579109 127579309 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001035534) promoter-TSS (NM_001035534) -202 NM_001035534 64855 Hs.522401 NM_022833 ENSG00000136830 FAM129B C9orf88|MEG-3|MINERVA|OC58|bA356B19.6 family with sequence similarity 129 member B protein-coding Merged-chr1-17054123-1 chr1 17054023 17054223 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003000) promoter-TSS (NM_003000) 47 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding Merged-chr10-97689680-1 chr10 97689580 97689780 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2422 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding Merged-chr16-30658279-1 chr16 30658179 30658379 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1240 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding Merged-chr3-158571101-1 chr3 158571001 158571201 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195433) promoter-TSS (NM_001195433) -35 NR_104147 100996447 Hs.369810 NR_104147 ENSG00000243150 LOC100996447 -0 uncharacterized LOC100996447 ncRNA Merged-chr1-151198441-1 chr1 151198341 151198541 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135636) promoter-TSS (NM_001135636) -103 NM_001330689 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A -0 phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding Merged-chr14-21456222-1 chr14 21456122 21456322 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -18924 NM_020920 57680 Hs.530698 NM_020920 ENSG00000100888 CHD8 AUTS18|HELSNF1 chromodomain helicase DNA binding protein 8 protein-coding Merged-chr17-42677188-1 chr17 42677088 42677288 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024927) promoter-TSS (NM_024927) -158 NR_073573 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 -0 pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding Merged-chr17-42133177-1 chr17 42133077 42133277 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001252039, intron 1 of 6) Tigger19a|DNA|TcMar-Tigger 10439 NM_033194 94086 Hs.620611 NM_033194 ENSG00000260325 HSPB9 CT51 heat shock protein family B (small) member 9 protein-coding Merged-chr16-66522335-1 chr16 66522235 66522435 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001172643, intron 6 of 9) intron (NM_001172643, intron 6 of 9) 27490 NM_001272050 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 mitochondrial protein-coding Merged-chr17-77286909-1 chr17 77286809 77287009 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001113492) promoter-TSS (NM_001113492) -982 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr6-14744178-1 chr6 14744078 14744278 0 7.590000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -458724 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA Merged-chr10-16817668-2 chr10 16817496 16817840 0 7.510000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_012425) promoter-TSS (NM_012425) -214 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding Merged-chr17-40099326-2 chr17 40099143 40099510 0 7.455000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_021724, intron 1 of 7) CpG 1399 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding Merged-chr10-7888672-1 chr10 7888572 7888772 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031923, intron 2 of 6) Charlie7|DNA|hAT-Charlie 70168 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding Merged-chr9-84189292-1 chr9 84189192 84189392 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Tigger1|DNA|TcMar-Tigger 125849 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 -0 uncharacterized LOC101927575 ncRNA Merged-chr1-172800124-1 chr1 172800024 172800224 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HERV9N-int|LTR|ERV1 141116 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr15-91965013-1 chr15 91964913 91965113 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 110713 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr12-84146916-1 chr12 84146816 84147016 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PB3|LINE|L1 765913 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr4-12695917-1 chr4 12695817 12696017 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 472466 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr10-12503949-1 chr10 12503849 12504049 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) intron (NM_153498, intron 1 of 10) -74804 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr20-480835-1 chr20 480735 480935 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -18282 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding Merged-chr15-92361070-1 chr15 92360970 92361170 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR40c|LTR|ERVL -32817 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr4-12616955-1 chr4 12616855 12617055 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MSTA|LTR|ERVL-MaLR 393504 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr12-70614252-1 chr12 70614152 70614352 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330204, intron 3 of 32) intron (NM_001330204, intron 3 of 32) -4228 NM_001206972 5787 Hs.201030 NM_002837 ENSG00000127329 PTPRB HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP protein tyrosine phosphatase, receptor type B protein-coding Merged-chr9-76644887-1 chr9 76644787 76644987 0 7.430000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001308049, exon 5 of 12) exon (NM_001308049, exon 5 of 12) 47528 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr5-41904281-2 chr5 41904158 41904405 0 7.320000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_175921) promoter-TSS (NM_175921) -63 NM_175921 285636 Hs.29899 NM_175921 ENSG00000205765 C5orf51 -0 chromosome 5 open reading frame 51 protein-coding Merged-chr1-23368402-2 chr1 23368278 23368526 0 7.295000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_033690) promoter-TSS (NR_033690) -16 NM_030634 80818 Hs.293798 NM_030634 ENSG00000125945 ZNF436 ZNF|Zfp46 zinc finger protein 436 protein-coding Merged-chrX-16786352-2 chrX 16786214 16786491 0 7.295000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001168683) promoter-TSS (NM_001168683) -80 NM_001168683 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding Merged-chr4-86594209-1 chr4 86594109 86594309 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006264) promoter-TSS (NM_006264) -106 NM_006264 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase, non-receptor type 13 protein-coding Merged-chr2-3558384-1 chr2 3558284 3558484 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038431) promoter-TSS (NR_038431) -2 NR_038429 100506054 Hs.606550 NR_038429 ENSG00000234171 RNASEH1-AS1 -0 RNASEH1 antisense RNA 1 ncRNA Merged-chr19-11435550-1 chr19 11435450 11435650 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001302454) promoter-TSS (NM_001302454) -95 NM_002743 5589 Hs.610830 NM_002743 ENSG00000130175 PRKCSH AGE-R2|G19P1|GIIB|PCLD|PCLD1|PKCSH|PLD1|VASAP-60 protein kinase C substrate 80K-H protein-coding Merged-chr15-92604321-1 chr15 92604221 92604421 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -32058 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr17-47895978-1 chr17 47895878 47896078 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003110) promoter-TSS (NM_003110) -162 NR_135480 102724532 Hs.729067 NR_135480 ENSG00000264920 LOC102724532 -0 uncharacterized LOC102724532 ncRNA Merged-chr17-44689833-1 chr17 44689733 44689933 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001099225) promoter-TSS (NM_001099225) -36 NM_144609 124808 Hs.579115 NM_144609 ENSG00000180329 CCDC43 -0 coiled-coil domain containing 43 protein-coding Merged-chr9-71911274-1 chr9 71911174 71911374 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016014) promoter-TSS (NM_016014) -29 NM_016014 51104 Hs.380389 NM_016014 ENSG00000107362 ABHD17B C9orf77|CGI-67|FAM108B1 abhydrolase domain containing 17B protein-coding Merged-chr18-24076426-1 chr18 24076326 24076526 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001135993, intron 4 of 13) intron (NM_001135993, intron 4 of 13) -36927 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding Merged-chr5-43064988-1 chr5 43064888 43065088 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_034127) TTS (NR_034127) 1983 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 -0 uncharacterized LOC100132356 ncRNA Merged-chr5-43515166-1 chr5 43515066 43515266 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_198566) promoter-TSS (NM_198566) 5 NM_198566 375444 Hs.661641 NM_198566 ENSG00000172244 C5orf34 -0 chromosome 5 open reading frame 34 protein-coding Merged-chr5-132215558-1 chr5 132215458 132215658 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001142599, intron 5 of 15) intron (NM_001142599, intron 5 of 15) 2360 NR_106888 102465498 NR_106888 ENSG00000283678 MIR6830 hsa-mir-6830 microRNA 6830 ncRNA Merged-chr9-134503008-1 chr9 134502908 134503108 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 96426 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding Merged-chr1-9766961-1 chr1 9766861 9767061 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001009566, intron 2 of 18) intron (NM_001009566, intron 2 of 18) 57565 NM_001009566 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding Merged-chr1-28259398-1 chr1 28259298 28259498 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031459) promoter-TSS (NM_031459) -54 NM_031459 83667 Hs.469543 NM_031459 ENSG00000130766 SESN2 HI95|SES2|SEST2 sestrin 2 protein-coding Merged-chr14-73027095-1 chr14 73026995 73027195 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001281734, exon 1 of 12) 5' UTR (NM_001281734, exon 1 of 12) 117 NM_021260 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding Merged-chr16-74985226-1 chr16 74985126 74985326 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324172) promoter-TSS (NM_001324172) -80 NM_001324172 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding Merged-chr22-24894720-1 chr22 24894620 24894820 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001098497, intron 17 of 24) MLT1H|LTR|ERVL-MaLR 44627 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding Merged-chr15-58332354-1 chr15 58332254 58332454 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -99622 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding Merged-chr17-61863590-1 chr17 61863490 61863690 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032043) promoter-TSS (NM_032043) -31 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding Merged-chr12-84270233-1 chr12 84270133 84270333 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 642596 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr10-3256796-1 chr10 3256696 3256896 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -61899 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 -0 uncharacterized LOC105376360 ncRNA Merged-chr16-13919975-1 chr16 13919875 13920075 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005236) promoter-TSS (NM_005236) -182 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4 endonuclease catalytic subunit protein-coding Merged-chr22-17706721-1 chr22 17706621 17706821 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270733) promoter-TSS (NM_001270733) 63 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding Merged-chr16-28950756-1 chr16 28950656 28950856 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032815) promoter-TSS (NM_032815) -241 NM_032815 84901 Hs.513470 NM_032815 ENSG00000176953 NFATC2IP ESC2|NIP45|RAD60 nuclear factor of activated T-cells 2 interacting protein protein-coding Merged-chr1-9473259-1 chr1 9473159 9473359 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -44263 NR_104622 100506022 Hs.131775 NR_104622 LOC100506022 -0 uncharacterized LOC100506022 ncRNA Merged-chr12-92145978-1 chr12 92145878 92146078 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135036) promoter-TSS (NR_135036) -81 NM_001731 694 Hs.255935 NM_001731 ENSG00000133639 BTG1 APRO2 BTG anti-proliferation factor 1 protein-coding Merged-chr1-172837425-1 chr1 172837325 172837525 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 178417 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr6-157764680-1 chr6 157764580 157764780 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -58491 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding Merged-chr2-186486145-1 chr2 186486045 186486245 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018471) promoter-TSS (NM_018471) -13 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding Merged-chr17-68457748-1 chr17 68457648 68457848 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017983) promoter-TSS (NM_017983) -224 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding Merged-chr4-83013103-1 chr4 83013003 83013203 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001115007) promoter-TSS (NM_001115007) -162 NM_001115007 132660 Hs.96952 NM_194282 ENSG00000189308 LIN54 CXCDC1|JC8.6|MIP120|TCX1 lin-54 DREAM MuvB core complex component protein-coding Merged-chr4-12596951-1 chr4 12596851 12597051 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1B|LTR|ERVL-MaLR 373500 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr9-81583790-1 chr9 81583690 81583890 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001303103, exon 20 of 20) 3' UTR (NM_001303103, exon 20 of 20) 105745 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr17-57184512-1 chr17 57184412 57184612 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -71339 NM_001322250 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding Merged-chr13-90323122-1 chr13 90323022 90323222 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 91940 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr14-104973323-1 chr14 104973223 104973423 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138420, intron 1 of 6) intron (NM_138420, intron 1 of 6) 5034 NM_138420 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding Merged-chr17-60677815-1 chr17 60677715 60677915 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330413) promoter-TSS (NM_001330413) 4 NM_001099432 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3, microtubule associated cell migration factor protein-coding Merged-chr1-205478104-1 chr1 205478004 205478204 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -22018 NR_103783 101669762 Hs.666219 NR_103783 BLACAT1 LINC00912|linc-UBC1|onco-lncRNA-30 bladder cancer associated transcript 1 (non-protein coding) ncRNA Merged-chr19-17859680-1 chr19 17859580 17859780 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000980) promoter-TSS (NM_000980) -198 NM_000980 6142 Hs.337766 NM_000980 ENSG00000105640 RPL18A L18A ribosomal protein L18a protein-coding Merged-chr1-8873759-1 chr1 8873659 8873859 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001428, intron 2 of 11) intron (NM_001428, intron 2 of 11) -2183 NM_001201483 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding Merged-chr15-92598386-1 chr15 92598286 92598486 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -26123 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr5-35925033-1 chr5 35924933 35925133 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_144647, intron 1 of 4) intron (NM_144647, intron 1 of 4) 13602 NM_001042625 133690 Hs.55150 NM_144647 ENSG00000152611 CAPSL -0 calcyphosine like protein-coding Merged-chr7-41956118-1 chr7 41956018 41956218 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -253010 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin beta A subunit protein-coding Merged-chr15-85020138-1 chr15 85020038 85020238 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) intron (NM_002605, intron 1 of 21) 38164 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr1-27875399-1 chr1 27875299 27875499 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004848, intron 1 of 4) intron (NM_004848, intron 1 of 4) 2856 NM_001039477 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1 thymocyte selection associated family member 2 protein-coding Merged-chr17-57948826-1 chr17 57948726 57948926 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001271875, intron 1 of 10) L3b|LINE|CR1 6497 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 -0 CUE domain containing 1 protein-coding Merged-chr9-111631262-1 chr9 111631162 111631362 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001015882) promoter-TSS (NM_001015882) -90 NR_037148 548645 Hs.534196 NM_001015882 ENSG00000059769 DNAJC25 bA16L21.2.1 DnaJ heat shock protein family (Hsp40) member C25 protein-coding Merged-chr19-42268834-1 chr19 42268734 42268934 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001304815, intron 1 of 20) CpG 297 NM_001304815 23152 Hs.388236 NM_015125 ENSG00000079432 CIC -0 capicua transcriptional repressor protein-coding Merged-chr21-41479664-1 chr21 41479564 41479764 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005656, intron 6 of 13) intron (NM_005656, intron 6 of 13) 28401 NM_001135099 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr9-76668836-1 chr9 76668736 76668936 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 8 of 15) MLT1B|LTR|ERVL-MaLR 23579 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr12-69977564-1 chr12 69977464 69977664 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER115|DNA|hAT-Tip100 152241 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr15-92664481-1 chr15 92664381 92664581 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -8680 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr17-43724105-1 chr17 43724005 43724205 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 34683 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding Merged-chr17-55610081-1 chr17 55609981 55610181 0 7.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 112783 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 -0 transmembrane protein 100 protein-coding Merged-chr1-12143774-2 chr1 12143613 12143936 0 7.220000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_001281430, exon 14 of 14) 3' UTR (NM_001281430, exon 14 of 14) -23169 NR_107000 102465836 NR_107000 ENSG00000028137 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA Merged-chr15-92796100-2 chr15 92795975 92796226 0 7.210000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_033769, exon 1 of 1) non-coding (NR_033769, exon 1 of 1) 616 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr17-47649707-2 chr17 47649579 47649836 0 7.190000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002265) promoter-TSS (NM_002265) -131 NM_002265 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding Merged-chr17-57893144-2 chr17 57892983 57893305 0 7.180000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 10245 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 -0 CUE domain containing 1 protein-coding Merged-chr1-26921660-2 chr1 26921549 26921772 0 7.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006600) promoter-TSS (NM_006600) -62 NM_006600 10726 Hs.263812 NM_006600 ENSG00000090273 NUDC HNUDC|MNUDC|NPD011 nuclear distribution C, dynein complex regulator protein-coding Merged-chrX-318944-2 chrX 318836 319052 0 7.120000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_027232) promoter-TSS (NR_027232) -125 NM_012227 8225 Hs.437145 NM_012227 ENSG00000178605 GTPBP6 PGPL GTP binding protein 6 (putative) protein-coding Merged-chr1-172144237-1 chr1 172144137 172144337 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_029618) TTS (NR_029618) 407 NR_029618 406977 NR_029618 ENSG00000208024 MIR199A2 MIR-199-s|MIRN199A2|mir-199a-2 microRNA 199a-2 ncRNA Merged-chr15-92530146-1 chr15 92530046 92530246 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic THE1-int|LTR|ERVL-MaLR 42117 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr15-92472854-1 chr15 92472754 92472954 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153040, intron 1 of 2) intron (NM_153040, intron 1 of 2) 1177 NM_001301106 145858 Hs.367879 NM_153040 C15orf32 -0 chromosome 15 open reading frame 32 protein-coding Merged-chr20-572393-1 chr20 572293 572493 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR -28555 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr15-100435955-1 chr15 100435855 100436055 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_120374, intron 4 of 4) L1PA8|LINE|L1 63016 NR_120374 102723320 Hs.416099 NR_120374 CERS3-AS1 -0 CERS3 antisense RNA 1 ncRNA Merged-chr10-12144068-1 chr10 12143968 12144168 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_024577, intron 5 of 13) AluJo|SINE|Alu -13252 NR_039699 100616488 NR_039699 ENSG00000265653 MIR548AK -0 microRNA 548ak ncRNA Merged-chr21-41626730-1 chr21 41626630 41626830 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -52572 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Merged-chr1-172150048-1 chr1 172149948 172150148 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) intron (NM_015569, intron 14 of 20) -5213 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr10-8707372-1 chr10 8707272 8707472 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -112981 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr20-564975-1 chr20 564875 565075 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -21137 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|CSNK2A3|OCNDS casein kinase 2 alpha 1 protein-coding Merged-chr4-28661406-1 chr4 28661306 28661506 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -158176 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr4-9054621-1 chr4 9054521 9054721 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 104870 NM_001040071 650293 Hs.535167 NM_001040071 LOC650293 -0 seven transmembrane helix receptor pseudo Merged-chr9-83342429-1 chr9 83342329 83342529 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_174938, intron 5 of 13) MIRb|SINE|MIR -10468 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Merged-chr1-172122826-1 chr1 172122726 172122926 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 13 of 20) intron (NM_015569, intron 13 of 20) -15982 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA Merged-chr15-92636384-1 chr15 92636284 92636484 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_207446, intron 1 of 2) MIRb|SINE|MIR 19417 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B -0 family with sequence similarity 174 member B protein-coding Merged-chr9-81568622-1 chr9 81568522 81568722 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MC1|LINE|L1 120913 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr13-90288981-1 chr13 90288881 90289081 0 7.110000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AluSc|SINE|Alu 57799 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chrX-13398659-2 chrX 13398532 13398787 0 7.040000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 63418 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 -0 long intergenic non-protein coding RNA 1203 ncRNA Merged-chr1-27914743-2 chr1 27914605 27914881 0 7.010000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002946) promoter-TSS (NM_002946) 54 NM_001297558 6118 Hs.79411 NM_002946 ENSG00000117748 RPA2 REPA2|RP-A p32|RP-A p34|RPA32 replication protein A2 protein-coding Merged-chr17-81683894-2 chr17 81683793 81683995 0 6.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004712) promoter-TSS (NM_004712) 30 NM_001040025 339231 Hs.658789 NM_001040025 ENSG00000214087 ARL16 -0 ADP ribosylation factor like GTPase 16 protein-coding Merged-chr7-47475246-1 chr7 47475146 47475346 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 106898 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Merged-chr13-78876429-1 chr13 78876329 78876529 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR2752|LTR|ERV1 -36379 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA Merged-chr10-119597069-1 chr10 119596969 119597169 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003252) promoter-TSS (NM_003252) -40 NR_136663 7073 Hs.501203 NM_003252 ENSG00000151923 TIAL1 TCBP|TIAR TIA1 cytotoxic granule associated RNA binding protein like 1 protein-coding Merged-chr6-155026673-1 chr6 155026573 155026773 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -63616 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T-cell lymphoma invasion and metastasis 2 protein-coding Merged-chr13-90287539-1 chr13 90287439 90287639 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic HERVP71A-int|LTR|ERV1 56357 NR_030754 693207 NR_030754 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA Merged-chr17-49192995-1 chr17 49192895 49193095 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 16386 NM_031498 2793 Hs.181781 NM_031498 ENSG00000167083 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 G protein subunit gamma transducin 2 protein-coding Merged-chr21-36736560-1 chr21 36736460 36736660 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_009586, intron 7 of 9) intron (NM_009586, intron 7 of 9) 37427 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Merged-chr19-15125800-1 chr19 15125700 15125900 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006844) promoter-TSS (NM_006844) -1 NM_006844 10994 Hs.78880 NM_006844 ENSG00000105135 ILVBL 209L8|AHAS|HACL1L|ILV2H ilvB acetolactate synthase like protein-coding Merged-chr4-18022211-1 chr4 18022111 18022311 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153686) promoter-TSS (NM_153686) -336 NM_153686 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding Merged-chr17-7932094-1 chr17 7931994 7932194 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_030684) promoter-TSS (NR_030684) -30 NM_053051 116840 Hs.348012 NM_053051 ENSG00000170037 CNTROB LIP8|PP1221 centrobin, centriole duplication and spindle assembly protein protein-coding Merged-chr22-39520202-1 chr22 39520102 39520302 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001675) promoter-TSS (NM_001675) -357 NM_001675 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding Merged-chr1-25247565-1 chr1 25247465 25247665 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135143) promoter-TSS (NR_135143) -46 NR_135786 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding Merged-chr4-23864073-1 chr4 23863973 23864173 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 4 of 14) intron (NM_001330751, intron 4 of 14) 17219 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr17-80147231-1 chr17 80147131 80147331 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014740) promoter-TSS (NM_014740) -48 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|MUK34|NMP265|NUK34|RCPS|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding Merged-chr10-8138664-1 chr10 8138564 8138764 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 83960 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding Merged-chr1-11805959-1 chr1 11805859 11806059 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_046428) promoter-TSS (NR_046428) -137 NM_001256959 1185 Hs.193043 NM_001286 ENSG00000011021 CLCN6 CLC-6 chloride voltage-gated channel 6 protein-coding Merged-chr1-153727822-1 chr1 153727722 153727922 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324475) promoter-TSS (NM_001324475) -245 NM_023015 65123 Hs.438723 NM_023015 ENSG00000143624 INTS3 C1orf193|C1orf60|INT3|SOSS-A|SOSSA integrator complex subunit 3 protein-coding Merged-chr14-39175097-1 chr14 39174997 39175197 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002687) promoter-TSS (NM_002687) -86 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding Merged-chr9-130712709-1 chr9 130712609 130712809 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1172 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1 non-receptor tyrosine kinase protein-coding Merged-chr1-24290089-1 chr1 24289989 24290189 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -29233 NM_198173 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding Merged-chr5-939330-1 chr5 939230 939430 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1B|LTR|ERVL-MaLR 46476 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr17-50935563-1 chr17 50935463 50935663 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -67585 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding Merged-chr19-39971062-1 chr19 39970962 39971162 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006503) promoter-TSS (NM_006503) 57 NM_006503 5704 Hs.211594 NM_006503 ENSG00000013275 PSMC4 MIP224|RPT3|S6|TBP-7|TBP7 proteasome 26S subunit, ATPase 4 protein-coding Merged-chr5-160165313-1 chr5 160165213 160165413 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -22054 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding Merged-chr15-75451873-1 chr15 75451773 75451973 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015477) promoter-TSS (NM_015477) -127 NM_001145358 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding Merged-chr9-128067969-1 chr9 128067869 128068069 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_197956) promoter-TSS (NM_197956) -231 NM_001006641 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding Merged-chr16-29790618-1 chr16 29790518 29790718 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256269) promoter-TSS (NM_001256269) -95 NM_001256269 3835 Hs.612151 NM_007317 ENSG00000079616 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding Merged-chr7-25125475-2 chr7 25125320 25125630 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_018947) promoter-TSS (NM_018947) -114 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding Merged-chr2-189661396-1 chr2 189661296 189661496 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019048) promoter-TSS (NM_019048) -3 NM_019048 54529 Hs.101364 NM_019048 ENSG00000138381 ASNSD1 NBLA00058|NS3TP1 asparagine synthetase domain containing 1 protein-coding Merged-chr17-80856613-1 chr17 80856513 80856713 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 12 of 33) intron (NM_020761, intron 12 of 33) -50981 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chr1-23344572-1 chr1 23344472 23344672 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001102397) promoter-TSS (NM_001102397) -208 NM_001102397 10236 Hs.373763 NM_005826 ENSG00000125944 HNRNPR HNRPR|hnRNP-R heterogeneous nuclear ribonucleoprotein R protein-coding Merged-chr11-65858353-1 chr11 65858253 65858453 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005507) promoter-TSS (NM_005507) -20 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding Merged-chr3-197960100-1 chr3 197960000 197960200 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001323028) promoter-TSS (NM_001323028) -81 NM_032263 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding Merged-chr5-91381081-1 chr5 91380981 91381181 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329670) promoter-TSS (NM_001329670) 734 NR_027435 100129716 Hs.116364 NR_027435 ENSG00000281357 ARRDC3-AS1 -0 ARRDC3 antisense RNA 1 ncRNA Merged-chr3-176767577-1 chr3 176767477 176767677 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1M1|LINE|L1 49424 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 -0 long intergenic non-protein coding RNA 1209 ncRNA Merged-chr17-75707177-1 chr17 75707077 75707277 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_126036, exon 10 of 10) non-coding (NR_126036, exon 10 of 10) -14151 NM_001005731 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding Merged-chr10-78925974-1 chr10 78925874 78926074 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR 141474 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 -0 ZMIZ1 antisense RNA 1 ncRNA Merged-chr9-76583109-1 chr9 76583009 76583209 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 82476 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 core 2 protein-coding Merged-chr1-22052627-1 chr1 22052527 22052727 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001791) promoter-TSS (NM_001791) 0 NM_001791 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding Merged-chr17-63773642-1 chr17 63773542 63773742 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020198) promoter-TSS (NM_020198) 86 NM_020198 57003 Hs.202011 NM_020198 ENSG00000108588 CCDC47 GK001|MSTP041 coiled-coil domain containing 47 protein-coding Merged-chr1-165393184-1 chr1 165393084 165393284 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 31800 NM_001256571 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding Merged-chr1-15526813-1 chr1 15526713 15526913 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_109898) promoter-TSS (NR_109898) 0 NM_001287811 23341 Hs.655410 NM_015291 ENSG00000116138 DNAJC16 -0 DnaJ heat shock protein family (Hsp40) member C16 protein-coding Merged-chr9-76613335-1 chr9 76613235 76613435 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_131751, exon 16 of 16) non-coding (NR_131751, exon 16 of 16) 79080 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr15-44427107-1 chr15 44427007 44427207 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016396) promoter-TSS (NM_016396) -274 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding Merged-chr14-96797292-1 chr14 96797192 96797392 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003384) promoter-TSS (NM_003384) -55 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A vaccinia related kinase 1 protein-coding Merged-chr3-139302357-1 chr3 139302257 139302457 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -41662 NM_020191 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|RPMS22 mitochondrial ribosomal protein S22 protein-coding Merged-chr1-218706319-1 chr1 218706219 218706419 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_031644, intron 4 of 6) intron (NR_031644, intron 4 of 6) 263693 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 -0 TGFB2 overlapping transcript 1 ncRNA Merged-chr17-4731324-1 chr17 4731224 4731424 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001001683) promoter-TSS (NM_001001683) -84 NM_001001683 400569 Hs.513885 NM_001001683 ENSG00000161920 MED11 HSPC296 mediator complex subunit 11 protein-coding Merged-chr1-16182070-1 chr1 16181970 16182170 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25961 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr11-66336939-1 chr11 66336839 66337039 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004292) promoter-TSS (NM_004292) -410 NM_004292 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 -0 Ras and Rab interactor 1 protein-coding Merged-chr2-69178480-1 chr2 69178380 69178580 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032208, intron 14 of 17) intron (NM_032208, intron 14 of 17) 74798 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA Merged-chr5-57173992-1 chr5 57173892 57174092 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001203246) promoter-TSS (NM_001203246) 44 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding Merged-chr18-9475330-1 chr18 9475230 9475430 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006788) promoter-TSS (NM_006788) -202 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding Merged-chr1-28736806-1 chr1 28736706 28736906 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001172828) promoter-TSS (NM_001172828) -134 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding Merged-chr1-33099530-2 chr1 33099364 33099697 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001301823, intron 7 of 8) intron (NM_001301823, intron 7 of 8) 17352 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding Merged-chr4-8182076-1 chr4 8181976 8182176 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -17168 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr1-155308733-1 chr1 155308633 155308833 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135822) promoter-TSS (NM_001135822) -15 NM_001242824 2224 Hs.335918 NM_002004 ENSG00000160752 FDPS FPPS|FPS|POROK9 farnesyl diphosphate synthase protein-coding Merged-chr1-204438816-1 chr1 204438716 204438916 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002646, intron 24 of 33) intron (NM_002646, intron 24 of 33) -26999 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding Merged-chr22-41448515-1 chr22 41448415 41448615 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1492 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding Merged-chrX-108091695-1 chrX 108091595 108091795 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321290) promoter-TSS (NM_001321290) 28 NM_001321288 115201 Hs.8763 NM_052936 ENSG00000101844 ATG4A APG4A|AUTL2 autophagy related 4A cysteine peptidase protein-coding Merged-chr2-118088351-1 chr2 118088251 118088451 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016133) promoter-TSS (NM_016133) -67 NM_001321330 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding Merged-chr15-92561970-1 chr15 92561870 92562070 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 10293 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr2-11744204-1 chr2 11744104 11744304 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001261427, intron 2 of 20) intron (NM_001261427, intron 2 of 20) -2392 NM_145693 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding Merged-chr7-1520777-1 chr7 1520677 1520877 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1G3|LTR|ERVL-MaLR -9955 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding Merged-chr11-57657635-1 chr11 57657535 57657735 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001142597) promoter-TSS (NM_001142597) -109 NM_001142597 10978 Hs.523687 NM_006831 ENSG00000172409 CLP1 HEAB|hClp1 cleavage and polyadenylation factor I subunit 1 protein-coding Merged-chr8-143936696-1 chr8 143936596 143936796 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_201382, intron 5 of 31) intron (NM_201382, intron 5 of 31) 2894 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding Merged-chr8-27774471-1 chr8 27774371 27774571 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017420) promoter-TSS (NM_001017420) -70 NM_001017420 157570 Hs.99480 NM_001017420 ENSG00000171320 ESCO2 2410004I17Rik|EFO2|RBS establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding Merged-chr8-22918429-1 chr8 22918329 22918529 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_144962, intron 3 of 6) intron (NM_144962, intron 3 of 6) 9479 NM_144962 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding Merged-chr2-97645965-1 chr2 97645865 97646065 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001862) promoter-TSS (NM_001862) -93 NM_001862 1329 Hs.1342 NM_001862 ENSG00000135940 COX5B COXVB cytochrome c oxidase subunit 5B protein-coding Merged-chr19-45370653-1 chr19 45370553 45370753 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130867) promoter-TSS (NM_001130867) -66 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2 TFIIH core complex helicase subunit protein-coding Merged-chr10-93445613-1 chr10 93445513 93445713 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_133337, intron 3 of 52) intron (NM_133337, intron 3 of 52) 36704 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding Merged-chr14-74619901-1 chr14 74619801 74620001 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7570 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding Merged-chr5-36151986-1 chr5 36151886 36152086 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032637) promoter-TSS (NM_032637) -57 NM_001243120 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding Merged-chr8-90859287-1 chr8 90859187 90859387 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022351, intron 3 of 12) LOR1a|LTR|ERV1 67594 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding Merged-chr12-120687037-1 chr12 120686937 120687137 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303628) promoter-TSS (NM_001303628) -87 NM_014730 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding Merged-chr15-74240200-1 chr15 74240100 74240300 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025055, intron 1 of 18) intron (NM_025055, intron 1 of 18) 3911 NM_025055 80125 Hs.383206 NM_025055 ENSG00000140481 CCDC33 CT61|HP11097 coiled-coil domain containing 33 protein-coding Merged-chr11-65487650-1 chr11 65487550 65487750 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10088 NR_144567 378938 Hs.621695 NR_002819 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA Merged-chr14-58244770-1 chr14 58244670 58244870 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152132) promoter-TSS (NM_152132) -35 NM_002788 5684 Hs.558799 NM_002788 ENSG00000100567 PSMA3 HC8|PSC3 proteasome subunit alpha 3 protein-coding Merged-chrX-1453165-1 chrX 1453065 1453265 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001173474) promoter-TSS (NM_001173474) -188 NM_004192 8623 Hs.533514 NM_004192 ENSG00000169093 ASMTL ASMTLX|ASMTLY|ASTML acetylserotonin O-methyltransferase-like protein-coding Merged-chr5-38607612-1 chr5 38607512 38607712 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_103553, exon 3 of 3) non-coding (NR_103553, exon 3 of 3) -12207 NM_002310 3977 Hs.133421 NM_002310 ENSG00000113594 LIFR CD118|LIF-R|SJS2|STWS|SWS leukemia inhibitory factor receptor alpha protein-coding Merged-chr2-127083950-1 chr2 127083850 127084050 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001320642, exon 1 of 19) 5' UTR (NM_001320642, exon 1 of 19) 600 NM_001320642 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|SH3P9 bridging integrator 1 protein-coding Merged-chr16-56932012-1 chr16 56931912 56932112 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001010989) promoter-TSS (NM_001010989) -78 NM_001272103 9709 Hs.146393 NM_014685 ENSG00000051108 HERPUD1 HERP|Mif1|SUP homocysteine inducible ER protein with ubiquitin like domain 1 protein-coding Merged-chr3-170870279-1 chr3 170870179 170870379 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320451) promoter-TSS (NM_001320451) -23 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 -0 ribosomal protein L22 like 1 protein-coding Merged-chr6-89080640-1 chr6 89080540 89080740 0 6.990000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006813) promoter-TSS (NM_006813) -70 NM_006813 10957 Hs.75969 NM_006813 ENSG00000146278 PNRC1 B4-2|PNAS-145|PROL2|PRR2 proline rich nuclear receptor coactivator 1 protein-coding Merged-chr8-103415271-2 chr8 103415158 103415385 0 6.960000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_030780) promoter-TSS (NM_030780) 64 NR_102338 81034 Hs.532265 NM_030780 ENSG00000164933 SLC25A32 MFT|MFTC|RREI solute carrier family 25 member 32 protein-coding Merged-chr1-21262985-2 chr1 21262873 21263098 0 6.815000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001397, intron 4 of 18) intron (NM_001397, intron 4 of 18) 16705 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding Merged-chr20-595074-1 chr20 594974 595174 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 15192 NM_004609 6939 Hs.437 NM_004609 ENSG00000125878 TCF15 EC2|PARAXIS|bHLHa40 transcription factor 15 (basic helix-loop-helix) protein-coding Merged-chr15-91940084-1 chr15 91939984 91940184 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 85784 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr15-85033399-1 chr15 85033299 85033499 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002605, intron 1 of 21) L1M7|LINE|L1 51425 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr15-90918449-1 chr15 90918349 90918549 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_135504, intron 20 of 21) intron (NR_135504, intron 20 of 21) -11731 NM_001039675 55898 Hs.389461 NM_017979 ENSG00000140553 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 myosin chaperone A protein-coding Merged-chr10-12083317-1 chr10 12083217 12083417 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018706, intron 2 of 16) MER30|DNA|hAT-Charlie 14400 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding Merged-chr17-31596752-1 chr17 31596652 31596852 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 21341 NR_029856 100126356 NR_029856 ENSG00000228768 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA Merged-chr4-8227423-1 chr4 8227323 8227523 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001318480, exon 12 of 18) exon (NM_001318480, exon 12 of 18) 28179 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr17-43171148-1 chr17 43171048 43171248 0 6.790000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_110868) promoter-TSS (NR_110868) 178 NM_001291571 4077 Hs.277721 NM_005899 ENSG00000188554 NBR1 1A1-3B|IAI3B|M17S2|MIG19 NBR1, autophagy cargo receptor protein-coding Merged-chrX-2677944-2 chrX 2677817 2678071 0 6.725000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1H|LTR|ERVL-MaLR -13189 NM_001321367 4267 Hs.653349 NM_002414 ENSG00000002586 CD99 HBA71|MIC2|MIC2X|MIC2Y|MSK5X CD99 molecule protein-coding Merged-chr17-59106985-2 chr17 59106842 59107129 0 6.725000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_015294) promoter-TSS (NM_015294) -64 NM_001005207 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding Merged-chr1-46132996-2 chr1 46132821 46133172 0 6.685000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001328652) promoter-TSS (NM_001328652) 40 NM_001114172 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding Merged-chr2-27370472-1 chr2 27370372 27370572 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001318965) promoter-TSS (NM_001318965) -15 NM_001318967 8890 Hs.169474 NM_015636 ENSG00000115211 EIF2B4 EIF-2B|EIF2B|EIF2Bdelta eukaryotic translation initiation factor 2B subunit delta protein-coding Merged-chr11-9460839-1 chr11 9460739 9460939 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036539) promoter-TSS (NR_036539) -126 NM_001282657 7702 Hs.523471 NM_003442 ENSG00000166478 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding Merged-chr19-58326948-1 chr19 58326848 58327048 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321116) promoter-TSS (NM_001321116) -71 NM_181846 342945 Hs.388162 NM_181846 ENSG00000182318 ZSCAN22 HKR2|ZNF50 zinc finger and SCAN domain containing 22 protein-coding Merged-chr4-8161825-1 chr4 8161725 8161925 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2993 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 -0 actin binding LIM protein family member 2 protein-coding Merged-chr1-23980474-1 chr1 23980374 23980574 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001191005) promoter-TSS (NM_001191005) -11 NM_006625 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding Merged-chr1-21324747-1 chr1 21324647 21324847 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 20794 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding Merged-chr6-158026679-1 chr6 158026579 158026779 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001178088, intron 1 of 25) intron (NM_001178088, intron 1 of 25) 9631 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding Merged-chr14-44897154-1 chr14 44897054 44897254 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017923) promoter-TSS (NM_001017923) -150 NM_001017923 122525 Hs.82098 NM_001017923 ENSG00000179476 C14orf28 DRIP-1|DRIP1|c14_5270 chromosome 14 open reading frame 28 protein-coding Merged-chr16-75517488-1 chr16 75517388 75517588 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 17682 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding Merged-chr12-56360423-1 chr12 56360323 56360523 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005419) promoter-TSS (NM_005419) -170 NM_005419 6773 Hs.530595 NM_005419 ENSG00000170581 STAT2 IMD44|ISGF-3|P113|STAT113 signal transducer and activator of transcription 2 protein-coding Merged-chr17-28951652-1 chr17 28951552 28951752 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033561) promoter-TSS (NM_001033561) -162 NM_001290131 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding Merged-chr1-18926770-1 chr1 18926670 18926870 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) -23971 NM_003748 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding Merged-chr11-64778891-1 chr11 64778791 64778991 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004630) promoter-TSS (NM_004630) -47 NM_201995 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding Merged-chr9-76642951-1 chr9 76642851 76643051 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 11 of 15) intron (NR_131751, intron 11 of 15) 49464 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr6-158060995-1 chr6 158060895 158061095 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001178088, intron 6 of 25) intron (NM_001178088, intron 6 of 25) 43947 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding Merged-chr1-24705489-1 chr1 24705389 24705589 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -39780 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding Merged-chr12-108691625-1 chr12 108691525 108691725 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014325, intron 2 of 10) intron (NM_014325, intron 2 of 10) 11373 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding Merged-chr2-237703813-1 chr2 237703713 237703913 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001137551, intron 1 of 11) intron (NM_001137551, intron 1 of 11) 11649 NM_001137553 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding Merged-chr1-8848946-1 chr1 8848846 8849046 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 17644 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA Merged-chr15-48811171-1 chr15 48811071 48811271 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001194998) promoter-TSS (NM_001194998) -25 NM_001194998 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding Merged-chr2-112764743-1 chr2 112764643 112764843 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304361) promoter-TSS (NM_001304361) -66 NM_152515 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L -0 cytoskeleton associated protein 2 like protein-coding Merged-chr11-28108345-1 chr11 28108245 28108445 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031217) promoter-TSS (NM_031217) 94 NM_001297775 196074 Hs.243326 NM_152636 ENSG00000169519 METTL15 METT5D1 methyltransferase like 15 protein-coding Merged-chr6-158853514-1 chr6 158853414 158853614 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_028496, intron 2 of 2) intron (NR_028496, intron 2 of 2) 4118 NR_028496 202459 Hs.487035 NM_145303 ENSG00000243775 OSTCP1 DC2L|OSTCL oligosaccharyltransferase complex subunit pseudogene 1 pseudo Merged-chr6-27473130-1 chr6 27473030 27473230 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001318893) promoter-TSS (NM_001318893) -12 NR_144687 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding Merged-chr17-59893088-1 chr17 59892988 59893188 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001193609) promoter-TSS (NM_001193609) 42 NM_001272043 6198 Hs.463642 NM_003161 ENSG00000108443 RPS6KB1 PS6K|S6K|S6K-beta-1|S6K1|STK14A|p70 S6KA|p70(S6K)-alpha|p70-S6K|p70-alpha ribosomal protein S6 kinase B1 protein-coding Merged-chr9-113221407-1 chr9 113221307 113221507 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015258) promoter-TSS (NM_015258) -46 NM_015258 23307 Hs.522351 NM_015258 ENSG00000119321 FKBP15 FKBP133|KIAA0674|PPP1R76 FK506 binding protein 15 protein-coding Merged-chr1-44674607-1 chr1 44674507 44674707 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300746) promoter-TSS (NM_001300746) 1 NM_024587 79639 Hs.22157 NM_024587 ENSG00000126106 TMEM53 NET4 transmembrane protein 53 protein-coding Merged-chr19-4634724-1 chr19 4634624 4634824 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4791 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding Merged-chr15-92571113-1 chr15 92571013 92571213 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_021493, intron 1 of 3) intron (NR_021493, intron 1 of 3) 1150 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr4-158672105-1 chr4 158672005 158672205 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004453) promoter-TSS (NM_004453) 4 NM_004453 2110 Hs.155729 NM_004453 ENSG00000171503 ETFDH ETFQO|MADD electron transfer flavoprotein dehydrogenase protein-coding Merged-chr1-113905053-1 chr1 113904953 113905153 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001253852) promoter-TSS (NM_001253852) 71 NM_006594 10717 Hs.515048 NM_006594 ENSG00000134262 AP4B1 BETA-4|CPSQ5|SPG47 adaptor related protein complex 4 beta 1 subunit protein-coding Merged-chr21-25932584-1 chr21 25932484 25932684 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136131, intron 11 of 15) intron (NM_001136131, intron 11 of 15) -196930 NM_001685 522 Hs.246310 NM_001685 ENSG00000154723 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 protein-coding Merged-chr1-23800835-1 chr1 23800735 23800935 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000403) promoter-TSS (NM_000403) -31 NM_001008216 2582 Hs.632380 NM_000403 ENSG00000117308 GALE SDR1E1 UDP-galactose-4-epimerase protein-coding Merged-chr17-49515347-1 chr17 49515247 49515447 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_002507) TTS (NM_002507) 4530 NR_106751 102465141 NR_106751 ENSG00000277478 MIR6165 hsa-mir-6165 microRNA 6165 ncRNA Merged-chr12-122527089-1 chr12 122526989 122527189 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_023012) promoter-TSS (NM_023012) -76 NR_036435 65117 Hs.432996 NM_023012 ENSG00000111011 RSRC2 -0 arginine and serine rich coiled-coil 2 protein-coding Merged-chr12-84293685-1 chr12 84293585 84293785 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 619144 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr10-62049240-1 chr10 62049140 62049340 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001244638) promoter-TSS (NM_001244638) 29 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding Merged-chr17-38558320-1 chr17 38558220 38558420 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_025248, exon 11 of 19) exon (NM_025248, exon 11 of 19) 47610 NM_025248 80725 Hs.448872 NM_025248 ENSG00000277363 SRCIN1 P140|SNIP SRC kinase signaling inhibitor 1 protein-coding Merged-chr9-76626660-1 chr9 76626560 76626760 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330680, intron 8 of 10) L2|LINE|L2 65755 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr1-201713639-1 chr1 201713539 201713739 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020443, intron 2 of 29) intron (NM_020443, intron 2 of 29) -5869 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 -0 microRNA 5191 ncRNA Merged-chr6-155314666-1 chr6 155314566 155314766 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016020) promoter-TSS (NM_016020) -183 NM_016020 51106 Hs.279908 NM_016020 ENSG00000029639 TFB1M CGI-75|CGI75|mtTFB|mtTFB1 transcription factor B1, mitochondrial protein-coding Merged-chr17-78883897-1 chr17 78883797 78883997 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 19320 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding Merged-chr19-41397481-1 chr19 41397381 41397581 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020158) promoter-TSS (NM_020158) -130 NM_020158 56915 Hs.283741 NM_020158 ENSG00000077348 EXOSC5 RRP41B|RRP46|Rrp46p|hRrp46p|p12B exosome component 5 protein-coding Merged-chr6-37257731-1 chr6 37257631 37257831 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145316) promoter-TSS (NM_145316) 27 NR_130108 55633 Hs.731702 NM_017772 ENSG00000065491 TBC1D22B C6orf197 TBC1 domain family member 22B protein-coding Merged-chr8-27892014-1 chr8 27891914 27892114 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173833, intron 7 of 8) intron (NM_173833, intron 7 of 8) -5898 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 -0 microRNA 4287 ncRNA Merged-chr17-3004368-1 chr17 3004268 3004468 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -38473 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 -0 uncharacterized LOC101927911 ncRNA Merged-chr15-82082656-1 chr15 82082556 82082756 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -5938 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 -0 long intergenic non-protein coding RNA 1583 ncRNA Merged-chr6-33249313-1 chr6 33249213 33249413 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_044997).7 promoter-TSS (NR_044997).7 -223 NR_044997 414765 Hs.675862 NR_044997 ENSG00000232940 HCG25 dJ1033B10.16 HLA complex group 25 (non-protein coding) ncRNA Merged-chr1-151311677-1 chr1 151311577 151311777 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002651, intron 3 of 12) intron (NM_002651, intron 3 of 12) 16038 NM_001198775 5298 Hs.632465 NM_002651 ENSG00000143393 PI4KB NPIK|PI4K-BETA|PI4K92|PI4KBETA|PI4KIIIBETA|PIK4CB phosphatidylinositol 4-kinase beta protein-coding Merged-chr11-6481445-1 chr11 6481345 6481545 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012192) promoter-TSS (NM_012192) -2 NM_012192 26515 Hs.54943 NM_012192 ENSG00000132286 TIMM10B FXC1|TIM10B|Tim9b translocase of inner mitochondrial membrane 10B protein-coding Merged-chr17-47970959-1 chr17 47970859 47971059 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278198) promoter-TSS (NM_001278198) 3 NM_001278217 80279 Hs.20157 NM_025197 ENSG00000108465 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding Merged-chr12-95028661-1 chr12 95028561 95028761 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003297, intron 11 of 13) AluJb|SINE|Alu -24948 NM_001258338 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr21-28993069-1 chr21 28992969 28993169 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015565) promoter-TSS (NM_015565) -110 NM_001320766 26046 Hs.288773 NM_015565 ENSG00000198862 LTN1 C21orf10|C21orf98|RNF160|ZNF294 listerin E3 ubiquitin protein ligase 1 protein-coding Merged-chr9-127919499-1 chr9 127919399 127919599 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2473 NM_175040 27090 Hs.3972 NM_014403 ENSG00000136840 ST6GALNAC4 IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein-coding Merged-chr19-44742062-1 chr19 44741962 44742162 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6659 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 B-cell CLL/lymphoma 3 protein-coding Merged-chr17-82003932-1 chr17 82003832 82004032 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330528, intron 6 of 14) intron (NM_001330528, intron 6 of 14) 18977 NM_144998 201254 Hs.37616 NM_144998 ENSG00000169689 CENPX CENP-X|D9|FAAP10|MHF2|STRA13 centromere protein X protein-coding Merged-chr10-110919281-1 chr10 110919181 110919381 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195306) promoter-TSS (NM_001195306) 85 NM_001195304 92482 Hs.232543 NM_001195304 ENSG00000214413 BBIP1 BBIP10|BBS18|NCRNA00081|bA348N5.3 BBSome interacting protein 1 protein-coding Merged-chr11-61972049-1 chr11 61971949 61972149 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4389 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding Merged-chr17-79797234-1 chr17 79797134 79797334 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020649) promoter-TSS (NM_020649) -118 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding Merged-chr6-158031557-1 chr6 158031457 158031657 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001178088, intron 2 of 25) intron (NM_001178088, intron 2 of 25) 14509 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding Merged-chr15-70099750-1 chr15 70099650 70099850 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG-8376 -1833 NM_001105192 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 transducin like enhancer of split 3 protein-coding Merged-chr6-84764774-1 chr6 84764674 84764874 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001080508) promoter-TSS (NM_001080508) -538 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box 18 protein-coding Merged-chr18-36309636-1 chr18 36309536 36309736 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025135, intron 1 of 24) intron (NM_025135, intron 1 of 24) 11940 NM_001281739 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding Merged-chr1-15836004-1 chr1 15835904 15836104 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_024279, exon 2 of 2) non-coding (NR_024279, exon 2 of 2) -11860 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding Merged-chr1-225999501-1 chr1 225999401 225999601 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152608) promoter-TSS (NM_152608) -136 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding Merged-chr20-3767866-1 chr20 3767766 3767966 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001039140) promoter-TSS (NM_001039140) -61 NM_001258430 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 -0 chromosome 20 open reading frame 27 protein-coding Merged-chr3-115239931-1 chr3 115239831 115240031 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -92651 NM_015642 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding Merged-chr12-82280943-1 chr12 82280843 82281043 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1C-int|LTR|ERVL-MaLR 77477 NM_014167 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding Merged-chr15-92240749-1 chr15 92240649 92240849 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PB3|LINE|L1 -153138 NM_001330416 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr1-7401931-1 chr1 7401831 7402031 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015215, intron 5 of 22) intron (NM_015215, intron 5 of 22) -369338 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding Merged-chr21-40719950-1 chr21 40719850 40720050 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001389, intron 1 of 32) L2c|LINE|L2 -89183 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA Merged-chr1-23197130-1 chr1 23197030 23197230 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2401 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding Merged-chr18-79679404-1 chr18 79679304 79679504 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001318511) promoter-TSS (NM_001318511) 341 NR_136643 284241 NR_136643 ENSG00000178412 LOC284241 -0 uncharacterized LOC284241 ncRNA Merged-chr1-20661498-1 chr1 20661398 20661598 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005216) promoter-TSS (NM_005216) 46 NM_005216 1650 Hs.523145 NM_005216 ENSG00000244038 DDOST AGER1|CDG1R|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit protein-coding Merged-chr16-57186150-1 chr16 57186050 57186250 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024946) promoter-TSS (NM_024946) -86 NM_024946 80011 Hs.396740 NM_024946 ENSG00000172775 FAM192A C16orf94|CDA018|CDA10|NIP30 family with sequence similarity 192 member A protein-coding Merged-chr1-16164401-1 chr1 16164301 16164501 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -8292 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr8-1963414-1 chr8 1963314 1963514 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7983 NR_126346 104266957 Hs.734498 NR_126346 ENSG00000253696 KBTBD11-OT1 -0 KBTBD11 overlapping transcript 1 ncRNA Merged-chr1-33127366-1 chr1 33127266 33127466 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 45188 NM_001301826 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding Merged-chr17-43760532-1 chr17 43760432 43760632 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1744 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding Merged-chr16-30650731-1 chr16 30650631 30650831 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024031) promoter-TSS (NM_024031) 29 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 -0 proline rich 14 protein-coding Merged-chr12-120087186-1 chr12 120087086 120087286 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_207311, intron 7 of 8) CpG 29653 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding Merged-chr12-84329219-1 chr12 84329119 84329319 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MD|LINE|L1 583610 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr6-152095406-1 chr6 152095306 152095506 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001122740, intron 8 of 8) MLT1K|LTR|ERVL-MaLR 72881 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding Merged-chr1-150364064-1 chr1 150363964 150364164 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001297674) promoter-TSS (NM_001297674) -47 NM_015203 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding Merged-chr15-67178726-1 chr15 67178626 67178826 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145102, intron 5 of 8) intron (NM_001145102, intron 5 of 8) 12571 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Merged-chr12-133037301-1 chr12 133037201 133037401 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110091) promoter-TSS (NR_110091) 15 NM_003428 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding Merged-chr1-212035601-1 chr1 212035501 212035701 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199809) promoter-TSS (NM_001199809) 48 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding Merged-chr17-78840899-1 chr17 78840799 78840999 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321291) promoter-TSS (NM_001321291) -372 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding Merged-chr19-37907156-1 chr19 37907056 37907256 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015073) promoter-TSS (NM_015073) -65 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding Merged-chr20-35305774-1 chr20 35305674 35305874 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_199487, intron 8 of 8) intron (NM_199487, intron 8 of 8) -13352 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding Merged-chr9-137086863-1 chr9 137086763 137086963 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016219) promoter-TSS (NM_016219) -46 NR_027447 100289341 Hs.593896 NR_027447 ENSG00000268996 MAN1B1-AS1 -0 MAN1B1 antisense RNA 1 (head to head) ncRNA Merged-chr17-77325451-1 chr17 77325351 77325551 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 5936 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr1-21587064-1 chr1 21586964 21587164 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 64791 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding Merged-chr17-63550375-1 chr17 63550275 63550475 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005828) promoter-TSS (NM_005828) -60 NM_005828 10238 Hs.410596 NM_005828 ENSG00000136485 DCAF7 AN11|HAN11|SWAN-1|WDR68 DDB1 and CUL4 associated factor 7 protein-coding Merged-chr1-35193295-1 chr1 35193195 35193395 0 6.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_136702) promoter-TSS (NR_136702) -150 NR_136703 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding Merged-chr5-134503630-2 chr5 134503504 134503756 0 6.675000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -2922 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 -0 long intergenic non-protein coding RNA 1843 ncRNA Merged-chrX-387309-2 chrX 387180 387438 0 6.675000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_013239) promoter-TSS (NM_013239) -354 NM_013239 28227 Hs.124942 NM_013239 ENSG00000167393 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2 regulatory subunit B''beta protein-coding Merged-chr17-75700573-2 chr17 75700441 75700706 0 6.585000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001301839, intron 4 of 9) intron (NM_001301839, intron 4 of 9) -20755 NM_001005731 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding Merged-chr1-28088666-2 chr1 28088543 28088790 0 6.570000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001282560) promoter-TSS (NM_001282560) -29 NM_001282560 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 -0 EYA transcriptional coactivator and phosphatase 3 protein-coding Merged-chr17-57850175-2 chr17 57850070 57850280 0 6.535000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_016070) promoter-TSS (NM_016070) -103 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding Merged-chr11-2400549-2 chr11 2400402 2400697 0 6.535000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001297658) promoter-TSS (NM_001297658) 61 NM_005706 10078 Hs.523424 NM_005706 ENSG00000184281 TSSC4 -0 tumor suppressing subtransferable candidate 4 protein-coding Merged-chr19-47515305-2 chr19 47515128 47515483 0 6.510000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_038456) promoter-TSS (NR_038456) -47 NM_003827 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding Merged-chr19-44890976-2 chr19 44890843 44891109 0 6.505000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001128916) promoter-TSS (NM_001128916) -244 NM_001128917 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding Merged-chr5-34915610-2 chr5 34915510 34915710 0 6.490000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_026591) promoter-TSS (NR_026591) 16 NR_026591 5810 Hs.38114 NM_002853 ENSG00000113456 RAD1 HRAD1|REC1 RAD1 checkpoint DNA exonuclease protein-coding Merged-chr21-45403390-1 chr21 45403290 45403490 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1747 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding Merged-chr1-188237785-1 chr1 188237685 188237885 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 794157 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr1-20575459-1 chr1 20575359 20575559 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13492 NM_001785 978 Hs.466910 NM_001785 ENSG00000158825 CDA CDD cytidine deaminase protein-coding Merged-chr4-8236834-1 chr4 8236734 8236934 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018986, intron 16 of 17) intron (NM_018986, intron 16 of 17) -32931 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding Merged-chr1-172619140-1 chr1 172619040 172619240 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic AmnSINE1|SINE|5S-Deu-L2 -39868 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr9-76705174-1 chr9 76705074 76705274 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001308047, exon 8 of 18) exon (NM_001308047, exon 8 of 18) -12759 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr15-92417254-1 chr15 92417154 92417354 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330416, intron 1 of 4) MIRb|SINE|MIR 23344 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Merged-chr12-84224841-1 chr12 84224741 84224941 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 687988 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr21-41565030-1 chr21 41564930 41565130 0 6.460000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -56872 NM_005656 7113 Hs.439309 NM_005656 ENSG00000184012 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Merged-chr21-33543000-2 chr21 33542889 33543112 0 6.410000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001291411) promoter-TSS (NM_001291411) -38 NM_001291411 6651 Hs.517262 NM_003103 ENSG00000159140 SON BASS1|C21orf50|DBP-5|NREBP|SON3|TOKIMS SON DNA binding protein protein-coding Merged-chr17-65106809-2 chr17 65106702 65106917 0 6.410000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_110801, intron 2 of 2) intron (NR_110801, intron 2 of 2) 5997 NR_110801 100507002 Hs.729924 NR_110801 LOC100507002 -0 uncharacterized LOC100507002 ncRNA Merged-chr17-81239128-2 chr17 81239016 81239241 0 6.390000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_144679) promoter-TSS (NM_144679) -37 NM_144679 146705 Hs.631761 NM_144679 ENSG00000167302 TEPSIN C17orf56|ENTHD2 TEPSIN, adaptor related protein complex 4 accessory protein protein-coding Merged-chr19-49640274-1 chr19 49640174 49640374 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006270) promoter-TSS (NM_006270) -131 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS -0 related RAS viral (r-ras) oncogene homolog protein-coding Merged-chr14-73724227-1 chr14 73724127 73724327 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001043318, intron 9 of 11) intron (NM_001043318, intron 9 of 11) -9802 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 paraneoplastic Ma antigen 1 protein-coding Merged-chr12-123383841-1 chr12 123383741 123383941 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324504) promoter-TSS (NM_001324504) -275 NM_001324505 387893 Hs.443735 NM_020382 ENSG00000183955 KMT5A PR-Set7|SET07|SET8|SETD8 lysine methyltransferase 5A protein-coding Merged-chr8-141026943-2 chr8 141026808 141027079 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -25630 NM_001316342 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding Merged-chr1-1764415-1 chr1 1764315 1764515 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001198994, intron 2 of 13) intron (NM_001198994, intron 2 of 13) -5773 NM_001198995 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding Merged-chr16-89490755-1 chr16 89490655 89490855 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256182) promoter-TSS (NM_001256182) -194 NM_001256182 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding Merged-chr1-225777642-1 chr1 225777542 225777742 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130440) promoter-TSS (NM_001130440) -171 NM_003133 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding Merged-chr17-49789132-1 chr17 49789032 49789232 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001346706, intron 1 of 13) CpG 513 NM_001346706 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding Merged-chr14-61762313-1 chr14 61762213 61762413 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003082) promoter-TSS (NM_003082) -44 NM_003082 6617 Hs.179312 NM_003082 ENSG00000023608 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex polypeptide 1 protein-coding Merged-chr16-2215115-1 chr16 2215015 2215215 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042371) promoter-TSS (NM_001042371) -294 NM_001042371 283871 Hs.442634 NM_001042371 ENSG00000184207 PGP AUM|G3PP|PGPase phosphoglycolate phosphatase protein-coding Merged-chr4-8206088-1 chr4 8205988 8206188 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134639, intron 2 of 14) L2b|LINE|L2 6844 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr19-45692572-1 chr19 45692472 45692672 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001163377) promoter-TSS (NM_001163377) 89 NM_017659 54814 Hs.631556 NM_017659 ENSG00000011478 QPCTL gQC glutaminyl-peptide cyclotransferase like protein-coding Merged-chr5-138543256-1 chr5 138543156 138543356 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004730) promoter-TSS (NM_004730) 44 NM_001291975 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding Merged-chr1-42682300-1 chr1 42682200 42682400 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004559) promoter-TSS (NM_004559) 65 NM_004559 4904 Hs.473583 NM_004559 ENSG00000065978 YBX1 BP-8|CBF-A|CSDA2|CSDB|DBPB|EFI-A|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 Y-box binding protein 1 protein-coding Merged-chr1-19210384-1 chr1 19210284 19210484 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020765) promoter-TSS (NM_020765) -2 NR_135114 101927895 Hs.660534 NR_135114 ENSG00000230424 LOC101927895 -0 uncharacterized LOC101927895 ncRNA Merged-chr17-75779889-1 chr17 75779789 75779989 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005324) promoter-TSS (NM_005324) 46 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding Merged-chr2-24793429-1 chr2 24793329 24793529 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001013663) promoter-TSS (NM_001013663) -47 NM_001013663 391356 Hs.406607 NM_001013663 ENSG00000184924 PTRHD1 C2orf79 peptidyl-tRNA hydrolase domain containing 1 protein-coding Merged-chr17-44775786-1 chr17 44775686 44775886 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318933, intron 17 of 26) CpG-11250 16607 NM_002390 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding Merged-chr19-50804991-1 chr19 50804891 50805091 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032712) promoter-TSS (NM_032712) -138 NM_001290155 84798 Hs.256301 NM_032712 ENSG00000167747 C19orf48 -0 chromosome 19 open reading frame 48 protein-coding Merged-chr1-9910578-1 chr1 9910478 9910678 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001012329) promoter-TSS (NM_001012329) -320 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding Merged-chr10-12068776-1 chr10 12068676 12068876 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018706) promoter-TSS (NM_018706) -141 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding Merged-chr17-47941414-1 chr17 47941314 47941514 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_103856) promoter-TSS (NR_103856) -10 NR_103856 100506325 Hs.656008 NR_103856 ENSG00000234494 SP2-AS1 -0 SP2 antisense RNA 1 ncRNA Merged-chr9-94783345-1 chr9 94783245 94783445 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001193329, intron 2 of 15) intron (NM_001193329, intron 2 of 15) 23696 NM_001193329 84909 Hs.434253 NM_032823 ENSG00000148120 C9orf3 AOPEP|AP-O|APO|C90RF3|ONPEP chromosome 9 open reading frame 3 protein-coding Merged-chr2-55050559-1 chr2 55050459 55050659 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_207520) promoter-TSS (NM_207520) 39 NM_207520 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding Merged-chr1-201955368-1 chr1 201955268 201955468 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006335) promoter-TSS (NM_006335) -123 NM_006335 10440 Hs.20716 NM_006335 ENSG00000134375 TIMM17A TIM17|TIM17A translocase of inner mitochondrial membrane 17 homolog A (yeast) protein-coding Merged-chr1-12132338-1 chr1 12132238 12132438 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001243, intron 12 of 14) L1MC3|LINE|L1 -34605 NR_107000 102465836 NR_107000 ENSG00000028137 MIR7846 hsa-mir-7846 microRNA 7846 ncRNA Merged-chr1-11980160-1 chr1 11980060 11980260 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001127660) promoter-TSS (NM_001127660) -21 NM_001127660 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding Merged-chr17-72407663-1 chr17 72407563 72407763 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_036488, intron 3 of 3) intron (NR_036488, intron 3 of 3) 64852 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 -0 long intergenic non-protein coding RNA 2003 ncRNA Merged-chr1-15886511-1 chr1 15886411 15886611 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015001, intron 3 of 14) intron (NM_015001, intron 3 of 14) 15362 NR_039973 100616427 NR_039973 ENSG00000266270 MIR5096 -0 microRNA 5096 ncRNA Merged-chr22-31399601-1 chr22 31399501 31399701 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004147) promoter-TSS (NM_004147) 48 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding Merged-chr16-1782739-1 chr16 1782639 1782839 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_080861) promoter-TSS (NM_080861) -159 NM_080861 90864 Hs.592080 NM_080861 ENSG00000162032 SPSB3 C16orf31|SSB3 splA/ryanodine receptor domain and SOCS box containing 3 protein-coding Merged-chr17-43546498-1 chr17 43546398 43546598 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001261438) promoter-TSS (NM_001261438) -66 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding Merged-chr19-42220205-1 chr19 42220105 42220305 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_133444) promoter-TSS (NM_133444) -53 NM_001270614 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding Merged-chr20-40506757-1 chr20 40506657 40506857 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 182483 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding Merged-chr14-64388248-1 chr14 64388148 64388348 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_005956, exon 1 of 28) 5' UTR (NM_005956, exon 1 of 28) 207 NM_005956 4522 Hs.652308 NM_005956 ENSG00000100714 MTHFD1 MTHFC|MTHFD methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 protein-coding Merged-chr1-70205626-1 chr1 70205526 70205726 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017768) promoter-TSS (NM_017768) 52 NM_017768 55631 Hs.147836 NM_017768 ENSG00000066557 LRRC40 dJ677H15.1 leucine rich repeat containing 40 protein-coding Merged-chr6-52504617-1 chr6 52504517 52504717 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_012288, exon 10 of 11) exon (NM_012288, exon 10 of 11) 72447 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 -0 translocation associated membrane protein 2 protein-coding Merged-chr17-36948894-1 chr17 36948794 36948994 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012138) promoter-TSS (NM_012138) 19 NM_012138 26574 Hs.195740 NM_012138 ENSG00000275700 AATF BFR2|CHE-1|CHE1|DED apoptosis antagonizing transcription factor protein-coding Merged-chr19-38711921-1 chr19 38711821 38712021 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322033, intron 8 of 20) intron (NM_001322033, intron 8 of 20) 32553 NM_144691 147968 Hs.731775 NM_144691 ENSG00000182472 CAPN12 -0 calpain 12 protein-coding Merged-chr16-75305511-1 chr16 75305411 75305611 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006324, intron 5 of 6) MIR|SINE|MIR -37458 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding Merged-chr17-46010166-1 chr17 46010066 46010266 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001203252, intron 8 of 10).3 intron (NM_001203252, intron 8 of 10).3 10916 NM_001007532 246744 Hs.661831 NM_001007532 ENSG00000256762 STH MAPTIT saitohin protein-coding Merged-chr12-53006316-1 chr12 53006216 53006416 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300821) promoter-TSS (NM_001300821) 58 NM_001300821 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding Merged-chr16-10862666-1 chr16 10862566 10862766 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -14532 NM_001286402 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding Merged-chr17-58007314-1 chr17 58007214 58007414 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001078166) promoter-TSS (NM_001078166) 32 NR_034041 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding Merged-chr4-120066926-1 chr4 120066826 120067026 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002358) promoter-TSS (NM_002358) -68 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 MAD2 mitotic arrest deficient-like 1 (yeast) protein-coding Merged-chrX-318238-1 chrX 318138 318338 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027232) promoter-TSS (NR_027232) 581 NM_012227 8225 Hs.437145 NM_012227 ENSG00000178605 GTPBP6 PGPL GTP binding protein 6 (putative) protein-coding Merged-chr10-120461009-1 chr10 120460909 120461109 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134516, intron 2 of 4) intron (NR_134516, intron 2 of 4) 4055 NM_001318169 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding Merged-chr12-49673742-1 chr12 49673642 49673842 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_198900, intron 1 of 24) intron (NM_198900, intron 1 of 24) 33672 NM_198900 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding Merged-chr3-129490384-1 chr3 129490284 129490484 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001280541, intron 16 of 29) intron (NM_001280541, intron 16 of 29) -38255 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding Merged-chr1-24417084-1 chr1 24416984 24417184 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322856, intron 2 of 12) intron (NM_001322856, intron 2 of 12) 1059 NM_001322857 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding Merged-chr22-42090863-1 chr22 42090763 42090963 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_034118) promoter-TSS (NR_034118) -70 NR_034118 100132273 Hs.709677 NR_034118 ENSG00000237037 NDUFA6-AS1 -0 NDUFA6 antisense RNA 1 (head to head) ncRNA Merged-chr18-11500679-1 chr18 11500579 11500779 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110778, intron 1 of 2) intron (NR_110778, intron 1 of 2) 10631 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 -0 long intergenic non-protein coding RNA 1255 ncRNA Merged-chr19-55339328-1 chr19 55339228 55339428 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032701) promoter-TSS (NM_032701) -525 NM_032701 84787 Hs.590982 NM_032701 ENSG00000133247 KMT5C SUV420H2|Suv4-20h2 lysine methyltransferase 5C protein-coding Merged-chr13-74154593-1 chr13 74154493 74154693 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -20664 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr4-13921141-1 chr4 13921041 13921241 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -190827 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 -0 long intergenic non-protein coding RNA 1085 ncRNA Merged-chr8-125430167-1 chr8 125430067 125430267 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025195) promoter-TSS (NM_025195) -154 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding Merged-chr2-73926798-1 chr2 73926698 73926898 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134894) promoter-TSS (NR_134894) -28 NM_001318859 1716 Hs.469022 NM_001929 ENSG00000114956 DGUOK MTDPS3|NCPH|PEOB4|dGK deoxyguanosine kinase protein-coding Merged-chr11-6683424-1 chr11 6683324 6683524 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022061) promoter-TSS (NM_022061) -23 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding Merged-chr11-30323022-1 chr11 30322922 30323122 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152316) promoter-TSS (NM_152316) -77 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding Merged-chr2-26033967-1 chr2 26033867 26034067 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_016131, exon 1 of 6) 5' UTR (NM_016131, exon 1 of 6) 107 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 -0 RAB10, member RAS oncogene family protein-coding Merged-chr1-205750364-1 chr1 205750264 205750464 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022731) promoter-TSS (NM_022731) -120 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding Merged-chr9-76590292-1 chr9 76590192 76590392 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER20|DNA|hAT-Charlie 89659 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 core 2 protein-coding Merged-chr1-150236164-1 chr1 150236064 150236264 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001136478) promoter-TSS (NM_001136478) -8 NM_001280560 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding Merged-chr6-24721316-1 chr6 24721216 24721416 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -2141 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding Merged-chr7-33722574-1 chr7 33722474 33722674 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -182337 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding Merged-chr17-42423355-1 chr17 42423255 42423455 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012232) promoter-TSS (NM_012232) -35 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 PTRF CAVIN|CAVIN1|CGL4|FKSG13|cavin-1 polymerase I and transcript release factor protein-coding Merged-chr17-74873357-1 chr17 74873257 74873457 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001258012) promoter-TSS (NM_001258012) -326 NR_047576 2232 Hs.69745 NM_004110 ENSG00000161513 FDXR ADXR ferredoxin reductase protein-coding Merged-chr2-44100619-1 chr2 44100519 44100719 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -68184 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding Merged-chr17-1716453-1 chr17 1716353 1716553 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_028502) promoter-TSS (NR_028502) -70 NM_152348 124997 Hs.234572 NM_152348 ENSG00000167716 WDR81 CAMRQ2|PPP1R166|SORF-2 WD repeat domain 81 protein-coding Merged-chr16-28846437-1 chr16 28846337 28846537 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003321) promoter-TSS (NM_003321) -29 NM_003321 7284 Hs.12084 NM_003321 ENSG00000178952 TUFM COXPD4|EF-TuMT|EFTU|P43 Tu translation elongation factor, mitochondrial protein-coding Merged-chr19-2785345-1 chr19 2785245 2785445 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003249) promoter-TSS (NM_003249) -115 NM_003249 7064 Hs.78769 NM_003249 ENSG00000172009 THOP1 EP24.15|MEPD_HUMAN|MP78|TOP thimet oligopeptidase 1 protein-coding Merged-chr1-24643091-1 chr1 24642991 24643191 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303448) promoter-TSS (NM_001303448) -12 NM_005839 10250 Hs.18192 NM_005839 ENSG00000133226 SRRM1 160-KD|POP101|SRM160 serine and arginine repetitive matrix 1 protein-coding Merged-chr6-170554251-1 chr6 170554151 170554351 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002793) promoter-TSS (NM_002793) -82 NM_001172085 6908 Hs.590872 NM_003194 ENSG00000112592 TBP GTF2D|GTF2D1|HDL4|SCA17|TFIID TATA-box binding protein protein-coding Merged-chr17-15651864-1 chr17 15651764 15651964 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_006470, exon 4 of 9) 5' UTR (NM_006470, exon 4 of 9) 31015 NM_006470 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding Merged-chr19-10380703-1 chr19 10380603 10380803 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003331) promoter-TSS (NM_003331) -131 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding Merged-chr2-9638708-1 chr2 9638608 9638808 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7653 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding Merged-chr4-127880808-1 chr4 127880708 127880908 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001190799) promoter-TSS (NM_001190799) -53 NM_001190799 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding Merged-chr1-19882263-1 chr1 19882163 19882363 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015207) promoter-TSS (NM_015207) -132 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding Merged-chr17-82283501-1 chr17 82283401 82283601 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 9313 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 -0 long intergenic non-protein coding RNA 1970 ncRNA Merged-chr6-154410705-1 chr6 154410605 154410805 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173515, intron 11 of 12) intron (NM_173515, intron 11 of 12) -53939 NM_001130700 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding Merged-chr1-109076066-1 chr1 109075966 109076166 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005645) promoter-TSS (NM_005645) -64 NM_005645 6884 Hs.632426 NM_005645 ENSG00000197780 TAF13 TAF(II)18|TAF2K|TAFII-18|TAFII18 TATA-box binding protein associated factor 13 protein-coding Merged-chr2-47034608-1 chr2 47034508 47034708 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020458, intron 15 of 19) intron (NM_020458, intron 15 of 19) -92753 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding Merged-chr11-18383799-1 chr11 18383699 18383899 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3988 NR_036116 100423016 NR_036116 ENSG00000264603 MIR3159 -0 microRNA 3159 ncRNA Merged-chr20-50510265-1 chr20 50510165 50510365 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002827) promoter-TSS (NM_002827) -56 NM_002827 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding Merged-chr21-45294917-1 chr21 45294817 45295017 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_026943, exon 3 of 3) non-coding (NR_026943, exon 3 of 3) 6865 NR_026943 642852 Hs.11637 NR_026943 LOC642852 -0 uncharacterized LOC642852 ncRNA Merged-chr11-65472248-1 chr11 65472148 65472348 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25490 NR_144567 378938 Hs.621695 NR_002819 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA Merged-chr1-16367138-1 chr1 16367038 16367238 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_073500, exon 1 of 2) non-coding (NR_073500, exon 1 of 2) 108 NR_073500 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding Merged-chr9-125126250-1 chr9 125126150 125126350 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173690, intron 2 of 18) MLT1F1|LTR|ERVL-MaLR 17309 NM_173690 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding Merged-chr12-95009341-1 chr12 95009241 95009441 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic FLAM_C|SINE|Alu -5628 NM_001258338 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13 NADH:ubiquinone oxidoreductase subunit A12 protein-coding Merged-chr9-129777356-1 chr9 129777256 129777456 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24291 NM_004878 9536 Hs.146688 NM_004878 ENSG00000148344 PTGES MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 prostaglandin E synthase protein-coding Merged-chr1-20614076-1 chr1 20613976 20614176 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001785, intron 3 of 3) intron (NM_001785, intron 3 of 3) -19379 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced putative kinase 1 protein-coding Merged-chr10-97882641-1 chr10 97882541 97882741 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001206528, intron 13 of 14) intron (NM_001206528, intron 13 of 14) 32403 NM_001010917 401647 Hs.567524 NM_001010917 ENSG00000155265 GOLGA7B C10orf132|C10orf133|bA451M19.3|bA459F3.4 golgin A7 family member B protein-coding Merged-chr19-1905235-1 chr19 1905135 1905335 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329533) promoter-TSS (NM_001329533) 21 NM_138422 113179 Hs.144980 NM_138422 ENSG00000213638 ADAT3 FWP005|MRT36|MST121|MSTP121|S863-5|TAD3 adenosine deaminase, tRNA specific 3 protein-coding Merged-chr6-32972027-1 chr6 32971927 32972127 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001291986, exon 2 of 14) 5' UTR (NM_001291986, exon 2 of 14) 432 NM_001199455 6046 Hs.75243 NM_005104 ENSG00000204256 BRD2 D6S113E|FSH|FSRG1|NAT|O27.1.1|RING3|RNF3 bromodomain containing 2 protein-coding Merged-chr10-73997954-1 chr10 73997854 73998054 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003373) promoter-TSS (NM_003373) -160 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding Merged-chr1-3313189-1 chr1 3313089 3313289 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_199454, intron 3 of 16) intron (NM_199454, intron 3 of 16) -141394 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding Merged-chr21-43728676-1 chr21 43728576 43728776 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003681, intron 1 of 10) CpG 9579 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal (pyridoxine, vitamin B6) kinase protein-coding Merged-chr12-10212484-1 chr12 10212384 10212584 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031412) promoter-TSS (NM_031412) -406 NM_031412 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding Merged-chr17-56699727-1 chr17 56699627 56699827 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 106028 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding Merged-chr21-25925459-1 chr21 25925359 25925559 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136131, intron 11 of 15) MER5A1|DNA|hAT-Charlie -189805 NM_001685 522 Hs.246310 NM_001685 ENSG00000154723 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 protein-coding Merged-chr5-910447-1 chr5 910347 910547 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004237, intron 9 of 12) intron (NM_004237, intron 9 of 12) 17593 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr4-75673554-1 chr4 75673454 75673654 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012297) promoter-TSS (NM_012297) -71 NM_203505 9908 Hs.303676 NM_012297 ENSG00000138757 G3BP2 -0 G3BP stress granule assembly factor 2 protein-coding Merged-chr8-119873676-1 chr8 119873576 119873776 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022783) promoter-TSS (NM_022783) 21 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding Merged-chr2-109351245-1 chr2 109351145 109351345 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001099289, intron 2 of 9) intron (NM_001099289, intron 2 of 9) -37620 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 -0 microRNA 4266 ncRNA Merged-chr21-26948322-1 chr21 26948222 26948422 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_007038, intron 2 of 7) intron (NM_007038, intron 2 of 7) -5639 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 -0 microRNA 4759 ncRNA Merged-chr17-48048166-2 chr17 48048056 48048276 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001330262) promoter-TSS (NM_001330262) -139 NM_001330261 4779 Hs.514284 NM_003204 ENSG00000082641 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2 like 1 protein-coding Merged-chr1-110964031-1 chr1 110963931 110964131 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001006945) promoter-TSS (NM_001006945) -87 NM_001006945 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding Merged-chr12-112125440-1 chr12 112125340 112125540 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006700) promoter-TSS (NM_006700) -105 NM_001143906 10906 Hs.5148 NM_006700 ENSG00000135148 TRAFD1 FLN29 TRAF-type zinc finger domain containing 1 protein-coding Merged-chr16-27203887-1 chr16 27203787 27203987 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145348) promoter-TSS (NM_001145348) -88 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding Merged-chr7-39949598-1 chr7 39949498 39949698 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031267) promoter-TSS (NM_031267) -762 NM_031267 8621 Hs.233552 NM_003718 ENSG00000065883 CDK13 CDC2L|CDC2L5|CHED|hCDK13 cyclin dependent kinase 13 protein-coding Merged-chr11-66336561-1 chr11 66336461 66336661 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004292) promoter-TSS (NM_004292) -32 NM_004292 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 -0 Ras and Rab interactor 1 protein-coding Merged-chr20-51750347-1 chr20 51750247 51750447 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006045, intron 1 of 27) intron (NM_006045, intron 1 of 27) 18064 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding Merged-chr1-36450491-1 chr1 36450391 36450591 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145047) promoter-TSS (NM_145047) -6 NM_001330493 127700 Hs.202207 NM_145047 ENSG00000116885 OSCP1 C1orf102|NOR1 organic solute carrier partner 1 protein-coding Merged-chr9-97633472-1 chr9 97633372 97633572 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002486) promoter-TSS (NM_002486) 49 NM_002486 4686 Hs.595669 NM_002486 ENSG00000136937 NCBP1 CBP80|NCBP|Sto1 nuclear cap binding protein subunit 1 protein-coding Merged-chrX-1591553-1 chrX 1591453 1591653 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027383) promoter-TSS (NR_027383) -40 NM_005088 8227 Hs.522572 NM_005088 ENSG00000197976 AKAP17A 721P|AKAP-17A|CCDC133|CXYorf3|DXYS155E|PRKA17A|SFRS17A|XE7|XE7Y A-kinase anchoring protein 17A protein-coding Merged-chr17-82698882-1 chr17 82698782 82698982 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006822) promoter-TSS (NM_006822) -160 NM_006822 10966 Hs.484068 NM_006822 ENSG00000141542 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding Merged-chr8-106060543-1 chr8 106060443 106060643 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125796) promoter-TSS (NR_125796) -40 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 -0 ZFPM2 antisense RNA 1 ncRNA Merged-chr10-102502169-1 chr10 102502069 102502269 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005736, intron 1 of 10) intron (NM_005736, intron 1 of 10) 586 NM_005736 10121 Hs.153961 NM_005736 ENSG00000138107 ACTR1A ARP1|Arp1A|CTRN1 ARP1 actin-related protein 1 homolog A, centractin alpha protein-coding Merged-chr6-36423387-1 chr6 36423287 36423487 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152990, intron 3 of 4) CpG -19380 NR_104480 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding Merged-chr12-2640885-1 chr12 2640785 2640985 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001129836, intron 31 of 46) intron (NM_001129836, intron 31 of 46) 31335 NR_046579 100874235 Hs.667644 NR_046579 ENSG00000256271 CACNA1C-AS2 -0 CACNA1C antisense RNA 2 ncRNA Merged-chr5-160119560-1 chr5 160119460 160119660 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001267035) promoter-TSS (NM_001267035) -115 NM_001267035 114825 Hs.744960 NM_052927 ENSG00000170234 PWWP2A MST101 PWWP domain containing 2A protein-coding Merged-chr5-173455443-1 chr5 173455343 173455543 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1F1|LTR|ERVL-MaLR 107988 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA Merged-chr14-74084573-1 chr14 74084473 74084673 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278593) promoter-TSS (NM_001278593) -80 NM_001278593 4329 Hs.293970 NM_005589 ENSG00000119711 ALDH6A1 MMSADHA|MMSDH aldehyde dehydrogenase 6 family member A1 protein-coding Merged-chr2-171922391-1 chr2 171922291 171922491 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003642) promoter-TSS (NM_003642) -34 NM_003642 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding Merged-chr1-55022216-1 chr1 55022116 55022316 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic G-rich|Low_complexity|Low_complexity -17260 NM_174936 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding Merged-chr18-75409028-1 chr18 75408928 75409128 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001037331) TTS (NM_001037331) 18675 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding Merged-chr1-202589387-1 chr1 202589287 202589487 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_002481) TTS (NM_002481) 49273 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding Merged-chr19-40465917-1 chr19 40465817 40466017 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000713) promoter-TSS (NM_000713) -99 NM_000713 645 Hs.515785 NM_000713 ENSG00000090013 BLVRB BVRB|FLR|HEL-S-10|SDR43U1 biliverdin reductase B protein-coding Merged-chr3-172750695-1 chr3 172750595 172750795 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001258316) promoter-TSS (NM_001258316) 10 NM_001258315 1894 Hs.518299 NM_018098 ENSG00000114346 ECT2 ARHGEF31 epithelial cell transforming 2 protein-coding Merged-chr3-121749861-1 chr3 121749761 121749961 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256487) promoter-TSS (NM_001256487) -94 NM_001256486 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding Merged-chr4-112231554-1 chr4 112231454 112231654 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018569) promoter-TSS (NM_018569) -185 NM_018569 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding Merged-chr1-89995030-1 chr1 89994930 89995130 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_182975) promoter-TSS (NM_182975) -64 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 -0 gem nuclear organelle associated protein 8 pseudogene 4 pseudo Merged-chr15-90985659-1 chr15 90985559 90985759 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_199413, intron 1 of 13) AluSg|SINE|Alu 8992 NM_001267580 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding Merged-chr3-126081801-1 chr3 126081701 126081901 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001008485, intron 1 of 11) intron (NM_001008485, intron 1 of 11) 2490 NM_017836 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding Merged-chr5-59793095-1 chr5 59792995 59793195 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -24483 NM_001197218 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding Merged-chr3-160565628-1 chr3 160565528 160565728 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002268) promoter-TSS (NM_002268) -40 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding Merged-chr17-16438840-1 chr17 16438740 16438940 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027179) promoter-TSS (NR_027179) -147 NR_045028 125144 Hs.368934 NM_152350 ENSG00000175061 LRRC75A-AS1 C17orf45|C17orf76-AS1|FAM211A-AS1|NCRNA00188|TSAP19 LRRC75A antisense RNA 1 ncRNA Merged-chr1-151790651-1 chr1 151790551 151790751 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006862) promoter-TSS (NM_006862) -117 NM_006862 11022 Hs.144439 NM_006862 ENSG00000182134 TDRKH TDRD2 tudor and KH domain containing protein-coding Merged-chr6-44011083-1 chr6 44010983 44011183 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) -7433 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 -0 uncharacterized LOC101929705 ncRNA Merged-chr11-66052230-1 chr11 66052130 66052330 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006842) promoter-TSS (NM_006842) -115 NM_006842 10992 Hs.406423 NM_006842 ENSG00000087365 SF3B2 Cus1|SAP145|SF3B145|SF3b1|SF3b150 splicing factor 3b subunit 2 protein-coding Merged-chr14-54312291-1 chr14 54312191 54312391 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -84577 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding Merged-chr6-14271115-1 chr6 14271015 14271215 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 14339 NR_108097 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA Merged-chr11-62599363-1 chr11 62599263 62599463 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330292, intron 3 of 17) intron (NM_001330292, intron 3 of 17) 1929 NM_001330292 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding Merged-chr2-42361546-1 chr2 42361446 42361646 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319038) promoter-TSS (NM_001319038) -303 NR_134947 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding Merged-chr2-88627817-1 chr2 88627717 88627917 0 6.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135540) promoter-TSS (NR_135540) -12 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 LOC101928403 -0 uncharacterized LOC101928403 ncRNA Merged-chr21-36430231-2 chr21 36430127 36430335 0 6.290000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 36210 NM_012130 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding Merged-chr19-49766562-2 chr19 49766446 49766678 0 6.260000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014203) promoter-TSS (NM_014203) -361 NM_130787 160 Hs.467125 NM_014203 ENSG00000196961 AP2A1 ADTAA|AP2-ALPHA|CLAPA1 adaptor related protein complex 2 alpha 1 subunit protein-coding Merged-chr17-67717777-2 chr17 67717646 67717909 0 6.260000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001303272) promoter-TSS (NM_001303272) -56 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 -0 nucleolar protein 11 protein-coding Merged-chr5-150036706-2 chr5 150036603 150036809 0 6.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_014983, exon 12 of 20) exon (NM_014983, exon 12 of 20) -35539 NM_030953 81789 Hs.169333 NM_030953 ENSG00000164296 TIGD6 -0 tigger transposable element derived 6 protein-coding Merged-chr17-45161581-2 chr17 45161475 45161687 0 6.240000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001303440) promoter-TSS (NM_001303440) -264 NM_001303441 124790 Hs.56382 NM_144608 ENSG00000168517 HEXIM2 L3 hexamethylene bisacetamide inducible 2 protein-coding Merged-chr17-50027800-2 chr17 50027680 50027921 0 6.240000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 27939 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 LOC284080 -0 uncharacterized LOC284080 ncRNA Merged-chr11-66958569-2 chr11 66958382 66958756 0 6.240000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_000920) promoter-TSS (NM_000920) -193 NM_000920 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding Merged-chr19-48469112-2 chr19 48468993 48469232 0 6.230000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004228) promoter-TSS (NM_004228) -96 NM_004228 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding Merged-chr1-8397185-2 chr1 8397083 8397288 0 6.230000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_012102, intron 13 of 23) MIR|SINE|MIR 26502 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding Merged-chr17-8156700-2 chr17 8156556 8156845 0 6.230000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -4265 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian clock 1 protein-coding Merged-chr17-50062561-2 chr17 50062407 50062716 0 6.220000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002204, intron 1 of 25) intron (NM_002204, intron 1 of 25) 6593 NM_002204 3675 Hs.265829 NM_002204 ENSG00000005884 ITGA3 CD49C|FRP-2|GAP-B3|GAPB3|ILNEB|MSK18|VCA-2|VL3A|VLA3a integrin subunit alpha 3 protein-coding Merged-chr19-49676742-2 chr19 49676597 49676888 0 6.210000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_198318) promoter-TSS (NM_198318) -410 NM_001207042 3276 Hs.20521 NM_001536 ENSG00000126457 PRMT1 ANM1|HCP1|HRMT1L2|IR1B4 protein arginine methyltransferase 1 protein-coding Merged-chr17-47279436-2 chr17 47279336 47279537 0 6.210000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000212, intron 2 of 14) intron (NM_000212, intron 2 of 14) 25594 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding Merged-chr7-23181939-2 chr7 23181822 23182056 0 6.145000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_007342, exon 1 of 7) 5' UTR (NM_007342, exon 1 of 7) 112 NM_007342 11097 Hs.408241 NM_007342 ENSG00000136243 NUPL2 CG1|NLP-1|NLP_1|hCG1 nucleoporin like 2 protein-coding Merged-chr1-172618590-1 chr1 172618490 172618690 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER61-int|LTR|ERV1 -40418 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding Merged-chr1-16173693-1 chr1 16173593 16173793 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -17584 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr21-25907726-1 chr21 25907626 25907826 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001136131, intron 12 of 15) intron (NM_001136131, intron 12 of 15) -172072 NM_001685 522 Hs.246310 NM_001685 ENSG00000154723 ATP5J ATP5|ATP5A|ATPM|CF6|F6 ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 protein-coding Merged-chr12-84341362-1 chr12 84341262 84341462 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 571467 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr4-24192280-1 chr4 24192180 24192380 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) MIRc|SINE|MIR 280549 NM_001330751 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr12-84290064-1 chr12 84289964 84290164 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 622765 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr21-26965381-1 chr21 26965281 26965481 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_007038, exon 1 of 8) exon (NM_007038, exon 1 of 8) 1739 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding Merged-chr10-8585242-1 chr10 8585142 8585342 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_134492, intron 1 of 1) intron (NR_134492, intron 1 of 1) 9149 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr9-76626401-1 chr9 76626301 76626501 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330680, intron 8 of 10) intron (NM_001330680, intron 8 of 10) 66014 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr1-172186096-1 chr1 172185996 172186196 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) intron (NM_015569, intron 14 of 20) -41261 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr21-22497016-1 chr21 22496916 22497116 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 398399 NR_038400 54143 Hs.352631 NR_038400 ENSG00000184856 LINC00308 C21orf74|NCRNA00308|PRED16 long intergenic non-protein coding RNA 308 ncRNA Merged-chr6-46851521-1 chr6 46851421 46851621 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_001098518) TTS (NM_001098518) -51950 NR_110658 101926962 Hs.680113 NR_110658 LOC101926962 -0 uncharacterized LOC101926962 ncRNA Merged-chr15-73699721-1 chr15 73699621 73699821 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001024736, intron 2 of 9) intron (NM_001024736, intron 2 of 9) 14990 NM_001329628 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding Merged-chr20-53949494-1 chr20 53949394 53949594 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001316361, intron 9 of 9) intron (NM_001316361, intron 9 of 9) -73785 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo Merged-chr5-34685715-1 chr5 34685615 34685815 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001145525, intron 2 of 19) MIR3|SINE|MIR 1208 NM_001145525 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr1-2140273-1 chr1 2140173 2140373 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001033581, intron 2 of 14) L1MEd|LINE|L1 35557 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding Merged-chr12-84336956-1 chr12 84336856 84337056 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 575873 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr19-55654503-1 chr19 55654403 55654603 0 6.140000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_001012478, exon 1 of 12) 5' UTR (NM_001012478, exon 1 of 12) 453 NM_001012478 11338 Hs.528007 NM_007279 ENSG00000063244 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding Merged-chr9-130860985-2 chr9 130860883 130861088 0 6.085000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005157, intron 3 of 10) intron (NM_005157, intron 3 of 10) 25730 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1 non-receptor tyrosine kinase protein-coding Merged-chr1-24018997-2 chr1 24018863 24019132 0 6.085000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -38534 NM_006625 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding Merged-chr20-35742397-2 chr20 35742233 35742562 0 6.080000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001242599) promoter-TSS (NM_001242599) -61 NM_004902 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding Merged-chr5-36657770-2 chr5 36657617 36657923 0 6.080000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001289940, intron 3 of 7) L3|LINE|CR1 51415 NM_001289940 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding Merged-chr11-57667773-1 chr11 57667673 57667873 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015457) promoter-TSS (NM_015457) -229 NM_015457 25921 Hs.27239 NM_015457 ENSG00000156599 ZDHHC5 DHHC5|ZNF375 zinc finger DHHC-type containing 5 protein-coding Merged-chr19-7943808-1 chr19 7943708 7943908 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006351) promoter-TSS (NM_006351) 15 NM_006351 10469 Hs.465784 NM_006351 ENSG00000104980 TIMM44 TIM44 translocase of inner mitochondrial membrane 44 protein-coding Merged-chr15-41774495-1 chr15 41774395 41774595 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001128608) promoter-TSS (NM_001128608) 61 NR_049761 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1 mitogen-activated protein kinase binding protein 1 protein-coding Merged-chr1-111449378-1 chr1 111449278 111449478 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317062) promoter-TSS (NM_001317062) -70 NM_001317062 79084 Hs.204773 NM_024102 ENSG00000116455 WDR77 HKMT1069|MEP-50|MEP50|Nbla10071|p44|p44/Mep50 WD repeat domain 77 protein-coding Merged-chr14-35341771-1 chr14 35341671 35341871 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49454 NM_002791 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding Merged-chr1-26234082-1 chr1 26233982 26234182 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001281517) promoter-TSS (NM_001281517) -71 NM_022778 64793 Hs.63795 NM_022778 ENSG00000130695 CEP85 CCDC21 centrosomal protein 85 protein-coding Merged-chr9-121201977-1 chr9 121201877 121202077 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_016322, exon 1 of 8) 5' UTR (NM_016322, exon 1 of 8) 110 NM_016322 51552 Hs.371563 NM_016322 ENSG00000119396 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding Merged-chr10-123154269-1 chr10 123154169 123154369 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004725) promoter-TSS (NM_004725) 25 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3, mitotic checkpoint protein protein-coding Merged-chr19-43596239-1 chr19 43596139 43596339 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001007561) promoter-TSS (NM_001007561) -104 NM_001007561 126298 Hs.6217 NM_001007561 ENSG00000167378 IRGQ FKSG27|IRGQ1 immunity related GTPase Q protein-coding Merged-chr10-97498548-1 chr10 97498448 97498648 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001289403) promoter-TSS (NM_001289403) 61 NM_001289403 64210 Hs.500721 NM_022362 ENSG00000155229 MMS19 MET18|MMS19L|hMMS19 MMS19 homolog, cytosolic iron-sulfur assembly component protein-coding Merged-chr2-127064986-1 chr2 127064886 127065086 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139349, intron 6 of 14) intron (NM_139349, intron 6 of 14) 17079 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|SH3P9 bridging integrator 1 protein-coding Merged-chr15-85380472-1 chr15 85380372 85380572 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_106993) promoter-TSS (NR_106993) -124 NR_106993 102465803 NR_106993 ENSG00000170776 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA Merged-chr1-162003262-1 chr1 162003162 162003362 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001347700, intron 4 of 7) intron (NM_001347700, intron 4 of 7) 21203 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B -0 olfactomedin like 2B protein-coding Merged-chr6-152381390-1 chr6 152381290 152381490 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_120501, exon 2 of 2) non-coding (NR_120501, exon 2 of 2) 860 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 -0 SYNE1 antisense RNA 1 ncRNA Merged-chr5-39425273-1 chr5 39425173 39425373 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001244871) promoter-TSS (NM_001244871) -40 NM_001244871 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB2, clathrin adaptor protein protein-coding Merged-chr14-36661778-1 chr14 36661678 36661878 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_006194, exon 2 of 5) 5' UTR (NM_006194, exon 2 of 5) 4210 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding Merged-chr1-212470253-1 chr1 212470153 212470353 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 37366 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding Merged-chr17-50482674-1 chr17 50482574 50482774 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_018346, exon 5 of 9) exon (NM_018346, exon 5 of 9) 3874 NR_130911 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 -0 radical S-adenosyl methionine domain containing 1 protein-coding Merged-chr17-80827065-1 chr17 80826965 80827165 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -21433 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chr10-68988677-1 chr10 68988577 68988777 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015634) promoter-TSS (NM_015634) -44 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding Merged-chr16-70428252-1 chr16 70428152 70428352 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006927, intron 1 of 6) intron (NM_006927, intron 1 of 6) 10836 NM_006927 6483 Hs.368611 NM_006927 ENSG00000157350 ST3GAL2 Gal-NAc6S|SIAT4B|ST3GALII|ST3GalA.2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 protein-coding Merged-chr5-32768227-1 chr5 32768127 32768327 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001204375, intron 3 of 7) intron (NM_001204375, intron 3 of 7) 56895 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding Merged-chr19-12890997-1 chr19 12890897 12891097 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_102316) promoter-TSS (NR_102316) -132 NM_013976 2639 Hs.532699 NM_000159 ENSG00000105607 GCDH ACAD5|GCD glutaryl-CoA dehydrogenase protein-coding Merged-chr5-1053544-1 chr5 1053444 1053644 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006598, intron 22 of 23).2 intron (NM_006598, intron 22 of 23).2 9430 NR_039778 100616479 NR_039778 ENSG00000263834 MIR4635 -0 microRNA 4635 ncRNA Merged-chrX-29662895-1 chrX 29662795 29662995 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014271, intron 5 of 10) intron (NM_014271, intron 5 of 10) 88617 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B -0 microRNA 4666b ncRNA Merged-chr11-60841968-1 chr11 60841868 60842068 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024098) promoter-TSS (NM_024098) 12 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 -0 coiled-coil domain containing 86 protein-coding Merged-chr6-110815434-1 chr6 110815334 110815534 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300960) promoter-TSS (NM_001300960) -118 NM_015076 23097 Hs.744895 NM_015076 ENSG00000155111 CDK19 CDC2L6|CDK11|bA346C16.3 cyclin dependent kinase 19 protein-coding Merged-chr12-126055745-1 chr12 126055645 126055845 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -40247 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000256342 LOC101927464 -0 uncharacterized LOC101927464 ncRNA Merged-chr14-99481293-1 chr14 99481193 99481393 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032233) promoter-TSS (NM_032233) -109 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4 cyclin K protein-coding Merged-chr17-40113295-1 chr17 40113195 40113395 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9242 NM_001012241 339287 Hs.532786 NM_001012241 ENSG00000188895 MSL1 MSL-1|hMSL1 male specific lethal 1 homolog protein-coding Merged-chr17-76562914-1 chr17 76562814 76563014 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038110, intron 2 of 2) intron (NR_038110, intron 2 of 2) 1281 NR_004395 677848 NR_004395 ENSG00000278261 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA Merged-chr1-1724381-1 chr1 1724281 1724481 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001199787) TTS (NM_001199787) 184 NR_132740 728642 Hs.651228 NM_024011 ENSG00000008128 CDK11A CDC2L2|CDC2L3|CDK11-p110|CDK11-p46|CDK11-p58|PITSLRE|p58GTA cyclin dependent kinase 11A protein-coding Merged-chr7-28358707-1 chr7 28358607 28358807 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182899, intron 1 of 9) AmnSINE1|SINE|5S-Deu-L2 -53818 NM_182898 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5 cAMP responsive element binding protein 5 protein-coding Merged-chr18-74496191-1 chr18 74496091 74496291 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018235) promoter-TSS (NM_018235) -74 NM_018235 55748 Hs.149185 NM_018235 ENSG00000133313 CNDP2 CN2|CPGL|HEL-S-13|HsT2298|PEPA CNDP dipeptidase 2 (metallopeptidase M20 family) protein-coding Merged-chr9-72525355-1 chr9 72525255 72525455 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 3554 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding Merged-chr5-151771480-1 chr5 151771380 151771580 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_132346) promoter-TSS (NR_132346) 28 NR_132346 100652758 Hs.587054 NM_001278082 LOC100652758 -0 uncharacterized LOC100652758 ncRNA Merged-chr1-6613634-1 chr1 6613534 6613734 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153812) promoter-TSS (NM_153812) -62 NM_153812 148479 Hs.516079 NM_153812 ENSG00000116273 PHF13 PHF5|SPOC1 PHD finger protein 13 protein-coding Merged-chr22-38705641-1 chr22 38705541 38705741 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004286) promoter-TSS (NM_004286) -161 NM_004286 9567 Hs.276925 NM_004286 ENSG00000100226 GTPBP1 GP-1|GP1|HSPC018 GTP binding protein 1 protein-coding Merged-chr1-36149734-1 chr1 36149634 36149834 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270897) promoter-TSS (NM_001270897) -220 NM_014408 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding Merged-chr17-68318488-1 chr17 68318388 68318588 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001267727, intron 2 of 11) intron (NM_001267727, intron 2 of 11) 26993 NM_001267727 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG -0 arylsulfatase G protein-coding Merged-chr1-6579913-1 chr1 6579813 6580013 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278648) promoter-TSS (NM_001278648) -78 NM_001278648 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding Merged-chr4-51843023-1 chr4 51842923 51843123 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001040402) promoter-TSS (NM_001040402) 23 NM_001040402 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 -0 defective in cullin neddylation 1 domain containing 4 protein-coding Merged-chr17_GL000205v2_random-3824-1 chr17_GL000205v2_random 3724 3924 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CER|Satellite|Satellite 54142 NR_003682 403340 Hs.572501 NR_003682 MGC70870 -0 C-terminal binding protein 2 pseudogene pseudo Merged-chr16-2905507-1 chr16 2905407 2905607 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -6472 NM_032296 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 -0 FLYWCH-type zinc finger 1 protein-coding Merged-chr3-155854632-1 chr3 155854532 155854732 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001190992) promoter-TSS (NM_001190992) -173 NM_001190992 9197 Hs.478031 NM_004733 ENSG00000169359 SLC33A1 ACATN|AT-1|AT1|CCHLND|SPG42 solute carrier family 33 member 1 protein-coding Merged-chr3-195900864-1 chr3 195900764 195900964 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005781, intron 1 of 14) intron (NM_005781, intron 1 of 14) -5303 NM_001010938 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding Merged-chr17-43483764-1 chr17 43483664 43483864 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001322216) promoter-TSS (NM_001322216) -101 NM_001322219 1659 Hs.463105 NM_004941 ENSG00000067596 DHX8 DDX8|HRH1|PRP22|PRPF22 DEAH-box helicase 8 protein-coding Merged-chr22-46090886-1 chr22 46090786 46090986 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_037413) promoter-TSS (NR_037413) -158 NR_037413 100500828 NR_037413 ENSG00000266533 MIR3619 -0 microRNA 3619 ncRNA Merged-chr19-57389823-1 chr19 57389723 57389923 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001172773) promoter-TSS (NM_001172773) -27 NM_152909 147694 Hs.126905 NM_152909 ENSG00000188785 ZNF548 -0 zinc finger protein 548 protein-coding Merged-chr6-43174651-1 chr6 43174551 43174751 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003131, intron 2 of 6) intron (NM_003131, intron 2 of 6) 2261 NM_001292001 6722 Hs.520140 NM_003131 ENSG00000112658 SRF MCM1 serum response factor protein-coding Merged-chr17-44108878-1 chr17 44108778 44108978 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001015053, intron 3 of 26) intron (NM_001015053, intron 3 of 26) -7034 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 -0 uncharacterized LOC105371789 ncRNA Merged-chr15-88638933-1 chr15 88638833 88639033 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_002201, exon 1 of 4) 5' UTR (NM_002201, exon 1 of 4) 190 NM_002201 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding Merged-chr15-89334934-1 chr15 89334834 89335034 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001126131) promoter-TSS (NM_001126131) -139 NM_002693 5428 Hs.706868 NM_002693 ENSG00000140521 POLG MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE DNA polymerase gamma, catalytic subunit protein-coding Merged-chr2-238060880-1 chr2 238060780 238060980 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016510) promoter-TSS (NM_016510) -44 NM_016510 51540 Hs.731909 NM_016510 ENSG00000132330 SCLY SCL|hSCL selenocysteine lyase protein-coding Merged-chr17-72421378-1 chr17 72421278 72421478 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_137281, intron 3 of 4) intron (NR_137281, intron 3 of 4) 78567 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 -0 long intergenic non-protein coding RNA 2003 ncRNA Merged-chr16-4734391-1 chr16 4734291 4734491 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324130) promoter-TSS (NM_001324130) -14 NM_001308089 124401 Hs.654859 NM_133450 ENSG00000168096 ANKS3 -0 ankyrin repeat and sterile alpha motif domain containing 3 protein-coding Merged-chr10-119450292-1 chr10 119450192 119450392 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005308, intron 13 of 15) intron (NM_005308, intron 13 of 15) 72320 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 -0 microRNA 4681 ncRNA Merged-chr5-138331912-1 chr5 138331812 138332012 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001287582) promoter-TSS (NM_001287582) -35 NM_022809 995 Hs.656 NM_001790 ENSG00000158402 CDC25C CDC25|PPP1R60 cell division cycle 25C protein-coding Merged-chr20-44522103-1 chr20 44522003 44522203 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_198941) promoter-TSS (NM_198941) 13 NM_006811 10955 Hs.272168 NM_006811 ENSG00000132824 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding Merged-chr19-46661407-1 chr19 46661307 46661507 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_040041) promoter-TSS (NR_040041) -71 NR_040041 100506068 Hs.434327 NR_040041 ENSG00000245598 DACT3-AS1 -0 DACT3 antisense RNA 1 ncRNA Merged-chr16-1964883-1 chr16 1964783 1964983 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_003142) promoter-TSS (NR_003142) -57 NM_002952 6187 Hs.356366 NM_002952 ENSG00000140988 RPS2 LLREP3|S2 ribosomal protein S2 protein-coding Merged-chr6-125956782-1 chr6 125956682 125956882 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138571) promoter-TSS (NM_138571) 67 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding Merged-chr15-92444993-1 chr15 92444893 92445093 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006011, intron 5 of 5) intron (NM_006011, intron 5 of 5) 26553 NR_126501 104613533 Hs.97584 NR_126501 ENSG00000259170 LOC104613533 -0 uncharacterized LOC104613533 ncRNA Merged-chr17-77323262-1 chr17 77323162 77323362 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 3747 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr1-183635874-1 chr1 183635774 183635974 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270439) promoter-TSS (NM_001270439) 67 NM_001270439 10092 Hs.518609 NM_005717 ENSG00000162704 ARPC5 ARC16|dJ127C7.3|p16-Arc actin related protein 2/3 complex subunit 5 protein-coding Merged-chr17-48618709-1 chr17 48618609 48618809 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3770 NM_024016 3218 Hs.514292 NM_024016 ENSG00000120068 HOXB8 HOX2|HOX2D|Hox-2.4 homeobox B8 protein-coding Merged-chr5-172418458-1 chr5 172418358 172418558 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001017995, intron 2 of 12) intron (NM_001017995, intron 2 of 12) 36065 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding Merged-chr14-75259324-1 chr14 75259224 75259424 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -19454 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding Merged-chr19-35748436-1 chr19 35748336 35748536 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019104) promoter-TSS (NM_019104) 75 NM_019104 55957 Hs.529100 NM_019104 ENSG00000267796 LIN37 F25965|ZK418.4|lin-37 lin-37 DREAM MuvB core complex component protein-coding Merged-chr19-38899653-1 chr19 38899553 38899753 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002503) promoter-TSS (NM_002503) -47 NM_001243116 4793 Hs.9731 NM_002503 ENSG00000104825 NFKBIB IKBB|TRIP9 NFKB inhibitor beta protein-coding Merged-chr19-56141038-1 chr19 56140938 56141138 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001253792) promoter-TSS (NM_001253792) -128 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding Merged-chr3-100709349-1 chr3 100709249 100709449 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006070) promoter-TSS (NM_006070) 18 NM_006070 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 TRK-fused gene protein-coding Merged-chr1-58784138-1 chr1 58784038 58784238 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002228) promoter-TSS (NM_002228) -25 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun Jun proto-oncogene, AP-1 transcription factor subunit protein-coding Merged-chr4-184537603-1 chr4 184537503 184537703 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1M6|LINE|L1 -63031 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding Merged-chr20-31593535-1 chr20 31593435 31593635 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11748 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1 HLH protein protein-coding Merged-chr8-94553627-1 chr8 94553527 94553727 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015496) promoter-TSS (NM_015496) -109 NM_015496 25962 Hs.202238 NM_015496 ENSG00000164944 KIAA1429 MSTP054|fSAP121 KIAA1429 protein-coding Merged-chr1-156767161-1 chr1 156767061 156767261 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005973) promoter-TSS (NM_005973) -321 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC papillary renal cell carcinoma (translocation-associated) protein-coding Merged-chr9-98989855-1 chr9 98989755 98989955 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001855, intron 5 of 41) intron (NM_001855, intron 5 of 41) 46142 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 -0 collagen type XV alpha 1 chain protein-coding Merged-chr1-1659135-1 chr1 1659035 1659235 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001291345) promoter-TSS (NM_001291345) -38 NM_033487 984 Hs.651228 NM_001787 ENSG00000248333 CDK11B CDC2L1|CDK11|CDK11-p110|CDK11-p46|CDK11-p58|CLK-1|PITSLREA|PK58|p58|p58CDC2L1|p58CLK-1 cyclin dependent kinase 11B protein-coding Merged-chr17-42155104-1 chr17 42155004 42155204 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001252039) promoter-TSS (NM_001252039) -60 NM_004583 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding Merged-chr19-58466964-1 chr19 58466864 58467064 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014347) promoter-TSS (NM_014347) -81 NM_014347 25799 Hs.515660 NM_014347 ENSG00000083812 ZNF324 ZF5128|ZNF324A zinc finger protein 324 protein-coding Merged-chr1-28247387-1 chr1 28247287 28247487 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 11296 NM_016311 93974 Hs.744914 NM_016311 ENSG00000130770 ATPIF1 ATPI|ATPIP|IP ATPase inhibitory factor 1 protein-coding Merged-chr18-21600750-1 chr18 21600650 21600850 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_052911) promoter-TSS (NM_052911) -18 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding Merged-chr10-78805470-1 chr10 78805370 78805570 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1ME3G|LINE|L1 261978 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 -0 ZMIZ1 antisense RNA 1 ncRNA Merged-chr12-88142140-1 chr12 88142040 88142240 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181783) promoter-TSS (NM_181783) 76 NM_025114 80184 Hs.150444 NM_025114 ENSG00000198707 CEP290 3H11Ag|BBS14|CT87|JBTS5|LCA10|MKS4|NPHP6|POC3|SLSN6|rd16 centrosomal protein 290 protein-coding Merged-chr18-48003058-1 chr18 48002958 48003158 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -71912 NM_001003652 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding Merged-chr12-53938614-1 chr12 53938514 53938714 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017410) promoter-TSS (NM_017410) -178 NM_017410 3229 Hs.118608 NM_017410 ENSG00000123364 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding Merged-chr19-37317791-1 chr19 37317691 37317891 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329775) promoter-TSS (NM_001329775) -91 NR_138108 284459 Hs.657027 NM_181786 ENSG00000181666 HKR1 ZNF875 HKR1, GLI-Kruppel zinc finger family member protein-coding Merged-chr7-28354679-1 chr7 28354579 28354779 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182899, intron 1 of 9) intron (NM_182899, intron 1 of 9) 55358 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5 cAMP responsive element binding protein 5 protein-coding Merged-chr19-39391130-1 chr19 39391030 39391230 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019088) promoter-TSS (NM_019088) 65 NM_001256826 54623 Hs.466714 NM_019088 ENSG00000006712 PAF1 F23149_1|PD2 PAF1 homolog, Paf1/RNA polymerase II complex component protein-coding Merged-chr16-88332427-1 chr16 88332327 88332527 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -95044 NM_001127464 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding Merged-chr5-75337020-1 chr5 75336920 75337120 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130996) promoter-TSS (NM_001130996) -148 NM_000859 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding Merged-chr20-51456660-1 chr20 51456560 51456760 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258295, intron 5 of 9) intron (NM_001258295, intron 5 of 9) -3683 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA Merged-chr3-153161303-1 chr3 153161203 153161403 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002886) promoter-TSS (NM_002886) -909 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B -0 RAP2B, member of RAS oncogene family protein-coding Merged-chr7-44582285-1 chr7 44582185 44582385 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303059) promoter-TSS (NM_001303059) 10 NM_001303062 222068 Hs.598832 NM_182547 ENSG00000158604 TMED4 ERS25|GMP25iso|HNLF|p24a3|p24alpha3 transmembrane p24 trafficking protein 4 protein-coding Merged-chr14-101073409-1 chr14 101073309 101073509 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_047664) TTS (NR_047664) 3498 NR_047664 100507257 Hs.301755 NR_047664 ENSG00000223403 MEG9 LINC00584 maternally expressed 9 (non-protein coding) ncRNA Merged-chr1-156660270-1 chr1 156660170 156660370 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_021948) TTS (NM_021948) 17127 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding Merged-chr8-73972416-1 chr8 73972316 73972516 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005648) promoter-TSS (NM_005648) -129 NM_001204860 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding Merged-chr19-40285560-1 chr19 40285460 40285660 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243028) promoter-TSS (NM_001243028) -165 NM_001243027 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding Merged-chr14-76919042-1 chr14 76918942 76919142 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -40596 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA Merged-chr2-236871785-1 chr2 236871685 236871885 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 184382 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 -0 uncharacterized LOC93463 ncRNA Merged-chrX-19683140-1 chrX 19683040 19683240 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024666, intron 5 of 16) intron (NM_001024666, intron 5 of 16) -12139 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3 domain containing kinase binding protein 1 protein-coding Merged-chr12-100267197-1 chr12 100267097 100267297 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135073) promoter-TSS (NR_135073) 57 NM_001317784 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding Merged-chr14-105480992-1 chr14 105480892 105481092 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001270841) TTS (NM_001270841) 3746 NR_073085 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding Merged-chr14-63642014-1 chr14 63641914 63642114 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001008726) promoter-TSS (NM_001008726) -91 NM_080666 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding Merged-chr21-46060854-1 chr21 46060754 46060954 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -37265 NM_001849 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding Merged-chr5-34743114-1 chr5 34743014 34743214 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 55555 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr2-218270242-1 chr2 218270142 218270342 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001077399) promoter-TSS (NM_001077399) -33 NM_001087 14 Hs.83347 NM_001087 ENSG00000127837 AAMP -0 angio associated migratory cell protein protein-coding Merged-chr19-50025638-1 chr19 50025538 50025738 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001308420) promoter-TSS (NM_001308420) -90 NM_001025778 51231 Hs.443330 NM_016440 ENSG00000105053 VRK3 -0 vaccinia related kinase 3 protein-coding Merged-chr12-56128036-1 chr12 56127936 56128136 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001184796) promoter-TSS (NM_001184796) -166 NM_015292 23344 Hs.632729 NM_015292 ENSG00000139641 ESYT1 FAM62A|MBC2 extended synaptotagmin 1 protein-coding Merged-chr1-53326324-1 chr1 53326224 53326424 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001018054, intron 2 of 17) CpG 1825 NM_004631 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding Merged-chr17-28335606-1 chr17 28335506 28335706 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001267774) promoter-TSS (NM_001267774) 84 NM_021137 7126 Hs.76090 NM_021137 ENSG00000109079 TNFAIP1 B12|B61|BTBD34|EDP1|hBACURD2 TNF alpha induced protein 1 protein-coding Merged-chr19-45423676-1 chr19 45423576 45423776 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_202001) promoter-TSS (NM_202001) -114 NM_202001 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1 endonuclease non-catalytic subunit protein-coding Merged-chr18-35241069-1 chr18 35240969 35241169 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135178) promoter-TSS (NM_001135178) 39 NM_001135178 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding Merged-chr12-56316111-1 chr12 56316011 56316211 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001127460) TTS (NM_001127460) 233 NM_001190991 10330 Hs.8752 NM_014255 ENSG00000257727 CNPY2 HP10390|MSAP|TMEM4|ZSIG9 canopy FGF signaling regulator 2 protein-coding Merged-chr11-606553-1 chr11 606453 606653 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001286581, exon 13 of 18) exon (NM_001286581, exon 13 of 18) 9175 NM_004031 3665 Hs.166120 NM_001572 ENSG00000185507 IRF7 IMD39|IRF-7H|IRF7A|IRF7B|IRF7C|IRF7H interferon regulatory factor 7 protein-coding Merged-chr19-17267373-1 chr19 17267273 17267473 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033549) promoter-TSS (NM_001033549) -3 NM_001288756 29086 Hs.190722 NM_014173 ENSG00000105393 BABAM1 C19orf62|HSPC142|MERIT40|NBA1 BRISC and BRCA1 A complex member 1 protein-coding Merged-chr12-120317662-1 chr12 120317562 120317762 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 10127 NM_000928 5319 Hs.992 NM_000928 ENSG00000170890 PLA2G1B PLA2|PLA2A|PPLA2 phospholipase A2 group IB protein-coding Merged-chr19-17305591-1 chr19 17305491 17305691 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_023937) promoter-TSS (NM_023937) -77 NM_023937 64981 Hs.515242 NM_023937 ENSG00000130312 MRPL34 L34mt mitochondrial ribosomal protein L34 protein-coding Merged-chr11-4608252-1 chr11 4608152 4608352 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304496) promoter-TSS (NM_001304496) 7 NM_018073 55128 Hs.523438 NM_018073 ENSG00000167333 TRIM68 GC109|RNF137|SS-56|SS56 tripartite motif containing 68 protein-coding Merged-chr8-123274735-1 chr8 123274635 123274835 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001204180) promoter-TSS (NM_001204180) -248 NM_007222 11244 Hs.521800 NM_007222 ENSG00000165156 ZHX1 -0 zinc fingers and homeoboxes 1 protein-coding Merged-chr3-50235887-1 chr3 50235787 50235987 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282618) promoter-TSS (NM_001282618) -270 NM_002070 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding Merged-chr1-21939865-1 chr1 21939765 21939965 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2568 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding Merged-chr3-131381734-1 chr3 131381634 131381834 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038976) promoter-TSS (NR_038976) -31 NM_001171906 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 -0 nudix hydrolase 16 protein-coding Merged-chr18-63422602-1 chr18 63422502 63422702 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004869) promoter-TSS (NM_004869) -83 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding Merged-chr1-30824559-1 chr1 30824459 30824659 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -66723 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding Merged-chr16-69726541-1 chr16 69726441 69726641 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000903) promoter-TSS (NM_000903) 89 NM_001025434 1728 Hs.406515 NM_000903 ENSG00000181019 NQO1 DHQU|DIA4|DTD|NMOR1|NMORI|QR1 NAD(P)H quinone dehydrogenase 1 protein-coding Merged-chr17-64202852-1 chr17 64202752 64202952 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018469, intron 2 of 11) intron (NM_018469, intron 2 of 11) 27904 NM_001288733 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding Merged-chr6-149012233-1 chr6 149012133 149012333 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005715, intron 5 of 7) intron (NM_005715, intron 5 of 7) 20428 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 -0 uncharacterized LOC105378047 ncRNA Merged-chr6-73521185-1 chr6 73521085 73521285 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001402) promoter-TSS (NM_001402) -153 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding Merged-chr20-51366285-1 chr20 51366185 51366385 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 86692 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA Merged-chr4-103019674-1 chr4 103019574 103019774 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100874) promoter-TSS (NM_001100874) 65 NM_001100874 150159 Hs.666728 NM_139173 ENSG00000164037 SLC9B1 NHA1|NHEDC1 solute carrier family 9 member B1 protein-coding Merged-chr6-46844188-1 chr6 46844088 46844288 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 50831 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding Merged-chr20-45363036-1 chr20 45362936 45363136 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_033542) promoter-TSS (NM_033542) -64 NM_033542 90196 Hs.655055 NM_033542 ENSG00000204070 SYS1 C20orf169|dJ453C12.4|dJ453C12.4.1 SYS1, golgi trafficking protein protein-coding Merged-chr3-194640489-1 chr3 194640389 194640589 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_018385) TTS (NM_018385) -7068 NM_001166306 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 -0 transmembrane protein 44 protein-coding Merged-chr2-113241240-1 chr2 113241140 113241340 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_047570) TTS (NR_047570) 4971 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 -0 PAX8 antisense RNA 1 ncRNA Merged-chr14-24114721-1 chr14 24114621 24114821 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_028100) promoter-TSS (NR_028100) 24 NM_001163484 80344 Hs.525251 NM_025230 ENSG00000100897 DCAF11 GL014|PRO2389|WDR23 DDB1 and CUL4 associated factor 11 protein-coding Merged-chr1-24415634-1 chr1 24415534 24415734 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199012) promoter-TSS (NM_001199012) -116 NM_001322864 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding Merged-chr8-134832483-1 chr8 134832383 134832583 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -5586 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA Merged-chr19-55216675-2 chr19 55216571 55216779 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -7169 NM_001161440 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase, receptor type H protein-coding Merged-chr17-48830956-1 chr17 48830856 48831056 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001261390) promoter-TSS (NM_001261390) -32 NM_001261395 10241 Hs.514920 NM_005831 ENSG00000136436 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding Merged-chr19-54190118-1 chr19 54190018 54190218 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146056).7 promoter-TSS (NM_001146056).7 -150 NM_001282333 79042 Hs.15580 NM_024075 ENSG00000170892 TSEN34 LENG5|PCH2C|SEN34|SEN34L tRNA splicing endonuclease subunit 34 protein-coding Merged-chr10-78945124-1 chr10 78945024 78945224 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_024431, intron 9 of 9) intron (NR_024431, intron 9 of 9) 122324 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 -0 ZMIZ1 antisense RNA 1 ncRNA Merged-chr1-38138691-1 chr1 38138591 38138791 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49460 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA Merged-chr6-158644859-1 chr6 158644759 158644959 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001291602) promoter-TSS (NM_001291602) -73 NM_001291602 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding Merged-chr8-41201629-1 chr8 41201529 41201729 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 69514 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO -0 microRNA 548ao ncRNA Merged-chr16-22374650-1 chr16 22374550 22374750 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001802) promoter-TSS (NM_001802) -33 NM_001802 1039 Hs.513430 NM_001802 ENSG00000140743 CDR2 CDR62|Yo cerebellar degeneration related protein 2 protein-coding Merged-chr1-172177167-1 chr1 172177067 172177267 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) MER44A|DNA|TcMar-Tigger -32332 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr14-96104967-1 chr14 96104867 96105067 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 65643 NM_001282464 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding Merged-chr17-60392386-1 chr17 60392286 60392486 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032582) promoter-TSS (NM_032582) -161 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding Merged-chr1-246566354-1 chr1 246566254 246566454 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022366) promoter-TSS (NM_022366) 17 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding Merged-chr1-19011299-1 chr1 19011199 19011399 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -54967 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 -0 intermediate filament family orphan 2 protein-coding Merged-chr17-79919243-1 chr17 79919143 79919343 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110851) promoter-TSS (NR_110851) -114 NR_110851 101928738 Hs.399280 NR_110851 ENSG00000262188 LINC01978 -0 long intergenic non-protein coding RNA 1978 ncRNA Merged-chr21-33642347-1 chr21 33642247 33642447 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001331011) promoter-TSS (NM_001331011) -53 NM_001331012 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding Merged-chr9-120843011-1 chr9 120842911 120843111 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024408) promoter-TSS (NR_024408) 10 NM_001270427 5711 Hs.193725 NM_005047 ENSG00000095261 PSMD5 S5B proteasome 26S subunit, non-ATPase 5 protein-coding Merged-chr17-5419729-1 chr17 5419629 5419829 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320653) promoter-TSS (NM_001320653) 10 NM_001320653 4927 Hs.584784 NM_002532 ENSG00000108559 NUP88 -0 nucleoporin 88 protein-coding Merged-chr19-39125686-1 chr19 39125586 39125786 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001014831) promoter-TSS (NM_001014831) -94 NM_001014834 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 -0 p21 (RAC1) activated kinase 4 protein-coding Merged-chr2-85595666-1 chr2 85595566 85595766 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016494) promoter-TSS (NM_016494) -48 NM_016494 51255 Hs.356187 NM_016494 ENSG00000168894 RNF181 HSPC238 ring finger protein 181 protein-coding Merged-chr1-10032854-1 chr1 10032754 10032954 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006048) promoter-TSS (NM_006048) -129 NM_001105562 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding Merged-chr1-167220619-1 chr1 167220519 167220719 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198786) promoter-TSS (NM_001198786) -210 NM_001198786 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding Merged-chr17-74569707-1 chr17 74569607 74569807 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2364 NM_001324076 100130520 NM_001324073 LOC100130520 CD300H|CD300Hs CD300c molecule-like protein-coding Merged-chr10-113074111-1 chr10 113074011 113074211 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001198531, intron 5 of 12) intron (NM_001198531, intron 5 of 12) 28756 NR_132769 106635520 NR_132769 SNORA87 -0 small nucleolar RNA, H/ACA box 87 snoRNA Merged-chr3-195915114-1 chr3 195915014 195915214 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6105 NM_005781 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding Merged-chr5-176537966-1 chr5 176537866 176538066 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014901) promoter-TSS (NM_014901) -546 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 -0 ring finger protein 44 protein-coding Merged-chr11-72080758-1 chr11 72080658 72080858 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_104476) promoter-TSS (NR_104476) -65 NM_006185 4926 Hs.325978 NM_006185 ENSG00000137497 NUMA1 NMP-22|NUMA nuclear mitotic apparatus protein 1 protein-coding Merged-chrX-3815082-1 chrX 3814982 3815182 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 28812 NR_034031 389906 Hs.636199 NM_001045547 LOC389906 -0 zinc finger protein 839 pseudogene pseudo Merged-chr17-42950445-1 chr17 42950345 42950545 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001136042) TTS (NM_001136042) 14053 NM_001261434 80755 Hs.317403 NM_001261434 ENSG00000266967 AARSD1 -0 alanyl-tRNA synthetase domain containing 1 protein-coding Merged-chr12-53079509-1 chr12 53079409 53079609 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032840) promoter-TSS (NM_032840) -89 NM_032840 84926 Hs.343334 NM_032840 ENSG00000167778 SPRYD3 -0 SPRY domain containing 3 protein-coding Merged-chr9-121121722-1 chr9 121121622 121121822 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330762) promoter-TSS (NM_001330762) -48 NM_001330762 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding Merged-chr1-94739857-1 chr1 94739757 94739957 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_104131, intron 1 of 4) intron (NR_104131, intron 1 of 4) 6043 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G -0 microRNA 378g ncRNA Merged-chr19-54102784-1 chr19 54102684 54102884 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282349) promoter-TSS (NM_001282349) -68 NM_004542 4696 Hs.198269 NM_004542 ENSG00000170906 NDUFA3 B9|CI-B9 NADH:ubiquinone oxidoreductase subunit A3 protein-coding Merged-chr1-41003843-1 chr1 41003743 41003943 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301237, intron 8 of 14) MLT1H2|LTR|ERVL-MaLR -10747 NR_037868 100507178 Hs.660056 NR_037868 ENSG00000281207 SLFNL1-AS1 -0 SLFNL1 antisense RNA 1 ncRNA Merged-chr14-20343232-1 chr14 20343132 20343332 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042618) promoter-TSS (NM_001042618) 179 NR_002312 85495 Hs.613102 NR_002312 ENSG00000277209 RPPH1 H1RNA|RPPH1-1 ribonuclease P RNA component H1 ncRNA Merged-chr17-76557711-1 chr17 76557611 76557811 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038108) promoter-TSS (NR_038108) -53 NR_038111 100507246 Hs.288215 NR_038108 ENSG00000163597 SNHG16 Nbla10727|Nbla12061|ncRAN small nucleolar RNA host gene 16 ncRNA Merged-chr6-169452220-1 chr6 169452120 169452320 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -198106 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding Merged-chr21-35925193-1 chr21 35925093 35925293 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 38748 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 -0 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo Merged-chr17-47947096-1 chr17 47946996 47947196 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_018129, exon 7 of 7) 3' UTR (NM_018129, exon 7 of 7) 5573 NM_018129 55163 Hs.631742 NM_018129 ENSG00000108439 PNPO HEL-S-302|PDXPO pyridoxamine 5'-phosphate oxidase protein-coding Merged-chr17-75393979-1 chr17 75393879 75394079 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_203506, intron 1 of 4) intron (NM_203506, intron 1 of 4) 11729 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding Merged-chr1-11791090-1 chr1 11790990 11791190 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330358, intron 11 of 11) intron (NM_001330358, intron 11 of 11) -11471 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 -0 uncharacterized LOC102724659 ncRNA Merged-chr17-73312118-1 chr17 73312018 73312218 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012121) promoter-TSS (NM_012121) -114 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding Merged-chr6-160972268-1 chr6 160972168 160972368 0 6.070000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19459 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding Merged-chr2-69914843-2 chr2 69914729 69914957 0 6.055000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002357) promoter-TSS (NM_002357) -198 NM_001202514 4084 Hs.468908 NM_002357 ENSG00000059728 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding Merged-chr5-31532218-2 chr5 31532078 31532359 0 6.050000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_013235) promoter-TSS (NM_013235) -43 NM_001100412 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding Merged-chr6-113654547-2 chr6 113654434 113654661 0 5.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4472 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LOC101927686 -0 uncharacterized LOC101927686 ncRNA Merged-chrX-7084277-2 chrX 7084133 7084421 0 5.955000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001178136, intron 2 of 3) intron (NM_001178136, intron 2 of 3) -62975 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase (microsomal), isozyme S protein-coding Merged-chr11-6234809-2 chr11 6234672 6234946 0 5.935000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001098794) promoter-TSS (NM_001098794) -98 NM_032127 84067 Hs.501793 NM_032127 ENSG00000051009 FAM160A2 C11orf56|FHIP family with sequence similarity 160 member A2 protein-coding Merged-chr1-6601364-2 chr1 6601204 6601525 0 5.925000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014851, intron 1 of 3) intron (NM_014851, intron 1 of 3) 1534 NM_001324309 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 -0 kelch like family member 21 protein-coding Merged-chr6-151452187-2 chr6 151452069 151452305 0 5.920000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001271937) promoter-TSS (NM_001271937) -6 NM_001271937 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding Merged-chr3-172711207-2 chr3 172711031 172711383 0 5.920000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001146276) promoter-TSS (NM_001146276) 11 NM_001146278 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding Merged-chr9-79571641-2 chr9 79571534 79571748 0 5.920000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001282748) promoter-TSS (NM_001282748) -132 NM_001282749 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4|Grg-4 transducin like enhancer of split 4 protein-coding Merged-chr14-71320380-2 chr14 71320275 71320486 0 5.905000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -77957 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA Merged-chr11-62646741-2 chr11 62646636 62646846 0 5.905000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001278192) promoter-TSS (NM_001278192) -15 NM_001329223 23193 Hs.595071 NM_014610 ENSG00000089597 GANAB G2AN|GIIA|GLUII|PKD3 glucosidase II alpha subunit protein-coding Merged-chr1-8040762-2 chr1 8040651 8040873 0 5.905000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR16A|LTR|ERVL -14429 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding Merged-chr17-82292901-2 chr17 82292796 82293006 0 5.905000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_135639) promoter-TSS (NR_135639) -87 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 -0 long intergenic non-protein coding RNA 1970 ncRNA Merged-chr1-202034893-2 chr1 202034734 202035052 0 5.895000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 24331 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding Merged-chr17-82298319-2 chr17 82298184 82298455 0 5.895000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -5505 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 -0 long intergenic non-protein coding RNA 1970 ncRNA Merged-chr1-18884356-1 chr1 18884256 18884456 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001319218, intron 5 of 13) intron (NM_001319218, intron 5 of 13) -1081 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 -0 microRNA 4695 ncRNA Merged-chr5-1051598-1 chr5 1051498 1051698 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_006598, exon 24 of 24).2 3' UTR (NM_006598, exon 24 of 24).2 11376 NR_039778 100616479 NR_039778 ENSG00000263834 MIR4635 -0 microRNA 4635 ncRNA Merged-chr15-99097466-1 chr15 99097366 99097566 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic HERV16-int|LTR|ERVL -7614 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr9-84524967-1 chr9 84524867 84525067 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1MA3|LINE|L1 -143491 NM_001291937 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding Merged-chr1-188277799-1 chr1 188277699 188277899 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 834171 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr10-8505267-1 chr10 8505167 8505367 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 89124 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr11-3050043-1 chr11 3049943 3050143 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001014437, intron 1 of 22) intron (NM_001014437, intron 1 of 22) 7408 NM_001014437 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding Merged-chr4-8210391-1 chr4 8210291 8210491 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_018986, intron 3 of 17) intron (NM_018986, intron 3 of 17) 11147 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 -0 SH3 domain and tetratricopeptide repeats 1 protein-coding Merged-chr12-83232873-1 chr12 83232773 83232973 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 545718 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr5-33781473-1 chr5 33781373 33781573 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001324512, intron 2 of 21) MER5A1|DNA|hAT-Charlie 110719 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding Merged-chr17-28662130-1 chr17 28662030 28662230 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001320755) promoter-TSS (NM_001320755) 42 NM_006923 6388 Hs.514036 NM_006923 ENSG00000132581 SDF2 -0 stromal cell derived factor 2 protein-coding Merged-chr12-84268789-1 chr12 84268689 84268889 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 644040 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr12-84169867-1 chr12 84169767 84169967 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 742962 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr5-31120443-1 chr5 31120343 31120543 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -73212 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding Merged-chr15-99105878-1 chr15 99105778 99105978 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_015286, exon 1 of 5) exon (NM_015286, exon 1 of 5) 798 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding Merged-chr3-185586188-1 chr3 185586088 185586288 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_021627) promoter-TSS (NM_021627) -55 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO1/sentrin/SMT3 specific peptidase 2 protein-coding Merged-chr17-74791692-1 chr17 74791592 74791792 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001321264, intron 6 of 9) intron (NM_001321264, intron 6 of 9) 15209 NM_001321264 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 -0 transmembrane protein 104 protein-coding Merged-chr21-40759583-1 chr21 40759483 40759683 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001389, intron 1 of 32) intron (NM_001389, intron 1 of 32) 87530 NM_001389 1826 Hs.397800 NM_001389 ENSG00000171587 DSCAM CHD2|CHD2-42|CHD2-52 DS cell adhesion molecule protein-coding Merged-chr5-151083632-1 chr5 151083532 151083732 0 5.820000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -2544 NM_001258454 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding Merged-chr6-31959097-2 chr6 31958977 31959218 0 5.780000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002904).4 promoter-TSS (NM_002904).4 -10 NM_002904 7936 Hs.423935 NM_002904 ENSG00000204356 NELFE D6S45|NELF-E|RD|RDBP|RDP negative elongation factor complex member E protein-coding Merged-chr1-1079632-2 chr1 1079503 1079762 0 5.780000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -5325 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 -0 ring finger protein 223 protein-coding Merged-chr11-66616504-2 chr11 66616391 66616618 0 5.780000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001198836) promoter-TSS (NM_001198836) -78 NM_001198846 100526737 Hs.523822 NM_001198845 ENSG00000248643 RBM14-RBM4 COAZ RBM14-RBM4 readthrough protein-coding Merged-chr5-42950778-2 chr5 42950674 42950883 0 5.775000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 42555 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 -0 uncharacterized LOC643977 ncRNA Merged-chrX-19554976-1 chrX 19554876 19555076 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024666, intron 12 of 16) intron (NM_001024666, intron 12 of 16) -39715 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding Merged-chr1-26865290-1 chr1 26865190 26865390 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_006142) TTS (NM_006142) 2148 NM_006142 2810 Hs.523718 NM_006142 ENSG00000175793 SFN YWHAS stratifin protein-coding Merged-chr17-49708247-1 chr17 49708147 49708347 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278784) promoter-TSS (NM_001278784) -296 NM_005827 10237 Hs.154073 NM_005827 ENSG00000121073 SLC35B1 UGTREL1 solute carrier family 35 member B1 protein-coding Merged-chr3-158709796-1 chr3 158709696 158709896 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002888, intron 3 of 3) intron (NM_002888, intron 3 of 3) 22690 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding Merged-chr6-17706972-1 chr6 17706872 17707072 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134618) promoter-TSS (NR_134618) -71 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 -0 uncharacterized LOC105374952 ncRNA Merged-chr7-73734875-1 chr7 73734775 73734975 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026690) promoter-TSS (NR_026690) -194 NR_026690 171022 Hs.650513 NR_026690 ENSG00000225969 ABHD11-AS1 LINC00035|NCRNA00035|WBSCR26 ABHD11 antisense RNA 1 (tail to tail) ncRNA Merged-chr7-66844955-1 chr7 66844855 66845055 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_003934) promoter-TSS (NR_003934) -129 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 -0 GTF2I repeat domain containing 1 pseudogene 1 pseudo Merged-chr14-22919235-1 chr14 22919135 22919335 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001077351) promoter-TSS (NM_001077351) -48 NM_001077352 55147 Hs.4997 NM_018107 ENSG00000100461 RBM23 CAPERbeta|PP239|RNPC4 RNA binding motif protein 23 protein-coding Merged-chr1-225700610-1 chr1 225700510 225700710 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -47467 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 enabled homolog (Drosophila) protein-coding Merged-chr3-141192502-1 chr3 141192402 141192602 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -39323 NM_152282 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding Merged-chr17-44138285-1 chr17 44138185 44138385 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3617 NM_024032 78995 Hs.437059 NM_024032 ENSG00000125319 C17orf53 -0 chromosome 17 open reading frame 53 protein-coding Merged-chr8-133449604-1 chr8 133449504 133449704 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 122336 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding Merged-chr15-40382944-1 chr15 40382844 40383044 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001142761, exon 1 of 9) exon (NM_001142761, exon 1 of 9) 223 NM_001142761 90417 Hs.525796 NM_033286 ENSG00000128944 KNSTRN C15orf23|HSD11|SKAP|TRAF4AF1 kinetochore localized astrin/SPAG5 binding protein protein-coding Merged-chr15-89575259-1 chr15 89575159 89575359 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001308025) promoter-TSS (NM_001308025) -328 NM_152259 90381 Hs.441708 NM_152259 ENSG00000140534 TICRR C15orf42|SLD3|Treslin TOPBP1 interacting checkpoint and replication regulator protein-coding Merged-chr4-113468469-1 chr4 113468369 113468569 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_172129, intron 15 of 17) intron (NM_172129, intron 15 of 17) 293458 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding Merged-chr22-40044669-1 chr22 40044569 40044769 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001024843) promoter-TSS (NM_001024843) -148 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B -0 trinucleotide repeat containing 6B protein-coding Merged-chr1-27659055-1 chr1 27658955 27659155 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 13158 NM_022872 2537 Hs.523847 NM_002038 ENSG00000126709 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon alpha inducible protein 6 protein-coding Merged-chr1-212482879-1 chr1 212482779 212482979 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49992 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding Merged-chr7-149463-1 chr7 149363 149563 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_108064).2 promoter-TSS (NR_108064).2 -25 NR_134325 102723672 Hs.605204 NR_134325 LOC102723672 -0 uncharacterized LOC102723672 ncRNA Merged-chr12-13390613-1 chr12 13390513 13390713 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13868 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA Merged-chr17-7239701-1 chr17 7239601 7239801 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284518) promoter-TSS (NM_001284518) -195 NM_024297 79142 Hs.644724 NM_024297 ENSG00000040633 PHF23 hJUNE-1b PHD finger protein 23 protein-coding Merged-chr10-119892643-1 chr10 119892543 119892743 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007190) promoter-TSS (NM_007190) 70 NR_037771 11196 Hs.435004 NM_007190 ENSG00000107651 SEC23IP MSTP053|P125|P125A SEC23 interacting protein protein-coding Merged-chr1-44807428-1 chr1 44807328 44807528 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001013632) promoter-TSS (NM_001013632) -143 NM_001013632 343521 Hs.585137 NM_001013632 ENSG00000188396 TCTEX1D4 -0 Tctex1 domain containing 4 protein-coding Merged-chr5-123423572-1 chr5 123423472 123423672 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001166226) promoter-TSS (NM_001166226) 20 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|SRTD13 centrosomal protein 120 protein-coding Merged-chr12-69808472-1 chr12 69808372 69808572 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_175625, intron 8 of 9) L1P1|LINE|L1 -16851 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor-like protein-coding Merged-chr2-54723498-1 chr2 54723398 54723598 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1514 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 -0 echinoderm microtubule associated protein like 6 protein-coding Merged-chr1-58546755-1 chr1 58546655 58546855 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145243) promoter-TSS (NM_145243) 44 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding Merged-chr19-54449053-1 chr19 54448953 54449153 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_126418) promoter-TSS (NR_126418) -15 NR_126418 104355426 Hs.528793 NR_126418 ENSG00000226696 LENG8-AS1 -0 LENG8 antisense RNA 1 ncRNA Merged-chr14-68942029-1 chr14 68941929 68942129 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 37337 NM_001130004 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding Merged-chr10-98361216-1 chr10 98361116 98361316 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1F1|LTR|ERVL-MaLR 34091 NR_031619 100302133 NR_031619 ENSG00000119943 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA Merged-chr1-155227578-1 chr1 155227478 155227678 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_002188).2 promoter-TSS (NR_002188).2 -44 NR_002188 2630 Hs.719930 NR_002188 ENSG00000160766 GBAP1 GBAP glucosylceramidase beta pseudogene 1 pseudo Merged-chr12-84147345-1 chr12 84147245 84147445 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 765484 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding Merged-chr14-20461704-1 chr14 20461604 20461804 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100814) promoter-TSS (NM_001100814) -92 NM_001100814 90809 Hs.7001 NM_144568 ENSG00000165782 TMEM55B C14orf9 transmembrane protein 55B protein-coding Merged-chr1-118960839-1 chr1 118960739 118960939 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152380, intron 1 of 7) intron (NM_152380, intron 1 of 7) 27014 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box 15 protein-coding Merged-chr12-55817898-1 chr12 55817798 55817998 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026722) promoter-TSS (NR_026722) -124 NM_014182 29095 Hs.534450 NM_014182 ENSG00000123353 ORMDL2 HSPC160|MST095|MSTP095|adoplin-2 ORMDL sphingolipid biosynthesis regulator 2 protein-coding Merged-chr15-68384670-1 chr15 68384570 68384770 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001004439, intron 2 of 29) intron (NM_001004439, intron 2 of 29) 47483 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding Merged-chrX-21944033-1 chrX 21943933 21944133 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004595, intron 1 of 10) Charlie13b|DNA|hAT-Charlie 3460 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding Merged-chr5-62412644-1 chr5 62412544 62412744 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016338) promoter-TSS (NM_016338) -102 NM_016338 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding Merged-chr1-230978953-1 chr1 230978853 230979053 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001122835) promoter-TSS (NM_001122835) -81 NM_024525 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 -0 tetratricopeptide repeat domain 13 protein-coding Merged-chr5-34687002-1 chr5 34686902 34687102 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145523) promoter-TSS (NM_001145523) -557 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr19-16496292-1 chr19 16496192 16496392 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145046) promoter-TSS (NM_145046) -19 NM_032207 84167 Hs.631627 NM_032207 ENSG00000105072 C19orf44 -0 chromosome 19 open reading frame 44 protein-coding Merged-chr4-85743537-1 chr4 85743437 85743637 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001025616, intron 3 of 9) AluJb|SINE|Alu 21069 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA Merged-chr19-1275864-1 chr19 1275764 1275964 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_017914, intron 1 of 2) CpG 343 NM_017914 55009 Hs.591383 NM_017914 ENSG00000228300 C19orf24 -0 chromosome 19 open reading frame 24 protein-coding Merged-chr2-43596073-1 chr2 43595973 43596173 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_073394) promoter-TSS (NR_073394) -27 NM_001345925 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA, armadillo repeat containing protein-coding Merged-chr11-69075674-1 chr11 69075574 69075774 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139075, intron 13 of 24) intron (NM_139075, intron 13 of 24) -7502 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 -0 microRNA 3164 ncRNA Merged-chr11-67055282-1 chr11 67055182 67055382 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1536 NM_014578 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding Merged-chr1-24003530-1 chr1 24003430 24003630 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -23067 NM_006625 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding Merged-chr2-85772489-1 chr2 85772389 85772589 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032827, intron 2 of 2) CpG 11188 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA Merged-chr5-78504875-1 chr5 78504775 78504975 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 143950 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 -0 lipoma HMGIC fusion partner-like 2 protein-coding Merged-chr1-28552994-1 chr1 28552894 28553094 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017846) promoter-TSS (NM_017846) -23 NR_003109 54952 Hs.533626 NM_017846 ENSG00000180098 TRNAU1AP PRO1902|SECP43|TRSPAP1 tRNA selenocysteine 1 associated protein 1 protein-coding Merged-chr19-17309411-1 chr19 17309311 17309511 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024050) promoter-TSS (NM_024050) -117 NM_024050 79016 Hs.466154 NM_024050 ENSG00000130311 DDA1 C19orf58|PCIA1 DET1 and DDB1 associated 1 protein-coding Merged-chr6-73704476-1 chr6 73704376 73704576 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001159588, intron 2 of 31) intron (NM_001159588, intron 2 of 31) -8345 NR_110889 101928489 Hs.660059 NR_110889 ENSG00000231652 LOC101928489 -0 uncharacterized LOC101928489 ncRNA Merged-chr20-57718598-1 chr20 57718498 57718698 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -7062 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding Merged-chr1-88684195-1 chr1 88684095 88684295 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320708) promoter-TSS (NM_001320708) 51 NM_006256 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding Merged-chr1-12549989-1 chr1 12549889 12550089 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 29034 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA Merged-chr19-37371039-1 chr19 37370939 37371139 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032453) promoter-TSS (NM_032453) -118 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 -0 zinc finger protein 527 protein-coding Merged-chr1-23865663-1 chr1 23865563 23865763 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000147, intron 1 of 7) intron (NM_000147, intron 1 of 7) 2706 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA fucosidase, alpha-L- 1 tissue protein-coding Merged-chr10-12472834-1 chr10 12472734 12472934 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153498, intron 1 of 10) L2b|LINE|L2 -105919 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 -0 microRNA 4480 ncRNA Merged-chr17-62820029-1 chr17 62819929 62820129 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135634, intron 1 of 1) intron (NR_135634, intron 1 of 1) 11527 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 LOC101927877 -0 uncharacterized LOC101927877 ncRNA Merged-chr17-28041576-1 chr17 28041476 28041676 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1086 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK -0 nemo like kinase protein-coding Merged-chr17-80792066-1 chr17 80791966 80792166 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 7 of 33) intron (NM_020761, intron 7 of 33) 13566 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chr17-72120952-1 chr17 72120852 72121052 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_103737) promoter-TSS (NR_103737) -68 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box 9 protein-coding Merged-chr9-122905475-1 chr9 122905375 122905575 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018835) promoter-TSS (NM_018835) -192 NM_001100588 54542 Hs.533499 NM_018835 ENSG00000056586 RC3H2 MNAB|RNF164 ring finger and CCCH-type domains 2 protein-coding Merged-chr17-72592828-1 chr17 72592728 72592928 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036488) promoter-TSS (NR_036488) -22 NR_137280 100499467 Hs.157726 NR_036488 LINC00673 HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA Merged-chr21-29342736-1 chr21 29342636 29342836 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001186, exon 5 of 5) exon (NM_001186, exon 5 of 5) -29765 NR_046564 100874322 Hs.326404 NR_046564 BACH1-IT2 -0 BACH1 intronic transcript 2 ncRNA Merged-chr2-130342827-1 chr2 130342727 130342927 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321118) promoter-TSS (NM_001321118) -146 NR_104471 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding Merged-chr6-14001813-1 chr6 14001713 14001913 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 76620 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 -0 ring finger protein 182 protein-coding Merged-chr14-64540503-1 chr14 64540403 64540603 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110550) promoter-TSS (NR_110550) 35 NM_021979 3306 Hs.432648 NM_021979 ENSG00000126803 HSPA2 HSP70-2|HSP70-3 heat shock protein family A (Hsp70) member 2 protein-coding Merged-chr1-153967371-1 chr1 153967271 153967471 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001255978) promoter-TSS (NM_001255978) 361 NM_014437 27173 Hs.7854 NM_014437 ENSG00000143570 SLC39A1 ZIP1|ZIRTL solute carrier family 39 member 1 protein-coding Merged-chr17-48483653-1 chr17 48483553 48483753 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 38820 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 -0 uncharacterized LOC101927166 ncRNA Merged-chr15-80455930-1 chr15 80455830 80456030 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014862, intron 2 of 18) intron (NM_014862, intron 2 of 18) 51580 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding Merged-chr15-90957602-1 chr15 90957502 90957702 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033544, intron 4 of 8) intron (NM_033544, intron 4 of 8) 2726 NM_033544 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 -0 RCC1 domain containing 1 protein-coding Merged-chr22-30969147-1 chr22 30969047 30969247 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303256) promoter-TSS (NM_001303256) -64 NR_110493 55000 Hs.554829 NR_002323 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 (non-protein coding) ncRNA Merged-chr3-184186049-1 chr3 184185949 184186149 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018358) promoter-TSS (NM_018358) -26 NM_018358 55324 Hs.361323 NM_018358 ENSG00000161204 ABCF3 EST201864 ATP binding cassette subfamily F member 3 protein-coding Merged-chr20-53915941-1 chr20 53915841 53916041 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -40232 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo Merged-chr17-56961129-1 chr17 56961029 56961229 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004645) promoter-TSS (NM_004645) -79 NM_004645 8161 Hs.532795 NM_004645 ENSG00000121058 COIL CLN80|p80-coilin coilin protein-coding Merged-chr17-38825337-1 chr17 38825237 38825437 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017748) promoter-TSS (NM_017748) 13 NM_017748 54883 Hs.406223 NM_017748 ENSG00000273559 CWC25 CCDC49 CWC25 spliceosome associated protein homolog protein-coding Merged-chr10-1049037-1 chr10 1048937 1049137 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317956) promoter-TSS (NM_001317956) -154 NM_001317957 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding Merged-chr17-37609575-1 chr17 37609475 37609675 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001163544) promoter-TSS (NM_001163544) -137 NM_001163545 11276 Hs.594647 NM_007247 ENSG00000275066 SYNRG AP1GBP1|SYNG synergin gamma protein-coding Merged-chr5-37668826-1 chr5 37668726 37668926 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 165996 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding Merged-chr21-25370437-1 chr21 25370337 25370537 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 61264 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA Merged-chr16-27550038-1 chr16 27549938 27550138 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286242) promoter-TSS (NM_001286242) -108 NM_001286242 2975 Hs.371718 NM_001520 ENSG00000077235 GTF3C1 TFIIIC|TFIIIC220|TFIIICalpha general transcription factor IIIC subunit 1 protein-coding Merged-chr6-154734264-1 chr6 154734164 154734364 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001286199, intron 2 of 20) CpG 886 NM_014892 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding Merged-chr19-1653048-1 chr19 1652948 1653148 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003200) promoter-TSS (NM_003200) -719 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21 transcription factor 3 protein-coding Merged-chr14-26842139-1 chr14 26842039 26842239 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic UCON29|DNA|PiggyBac? -20019 NR_110033 101927062 NR_110033 ENSG00000257845 LOC101927062 -0 uncharacterized LOC101927062 ncRNA Merged-chr6-145964414-1 chr6 145964314 145964514 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042683) promoter-TSS (NM_001042683) -317 NM_173082 257218 Hs.723297 NM_173082 ENSG00000146414 SHPRH bA545I5.2 SNF2 histone linker PHD RING helicase protein-coding Merged-chr17-40100754-1 chr17 40100654 40100854 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021724) promoter-TSS (NM_021724) -29 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding Merged-chr1-20493953-1 chr1 20493853 20494053 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7718 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding Merged-chr5-132389817-1 chr5 132389717 132389917 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003060, intron 6 of 9) intron (NM_003060, intron 6 of 9) -19901 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 LOC553103 -0 uncharacterized LOC553103 ncRNA Merged-chr18-9017304-1 chr18 9017204 9017404 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -85326 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k NADH:ubiquinone oxidoreductase core subunit V2 protein-coding Merged-chr6-37102585-1 chr6 37102485 37102685 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -67561 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding Merged-chr21-40728919-1 chr21 40728819 40729019 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001389, intron 1 of 32) intron (NM_001389, intron 1 of 32) -98152 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA Merged-chr12-6534471-1 chr12 6534371 6534571 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002046) promoter-TSS (NM_002046) 66 NM_002046 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding Merged-chr3-188286287-1 chr3 188286187 188286387 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 60882 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP -0 LIM domain containing preferred translocation partner in lipoma protein-coding Merged-chr11-15650186-1 chr11 15650086 15650286 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001293172, intron 1 of 2) CpG 6301 NM_001293172 102724957 Hs.512245 NM_001293172 ENSG00000254695 LOC102724957 -0 uncharacterized LOC102724957 protein-coding Merged-chr17-77287838-1 chr17 77287738 77287938 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001113492) promoter-TSS (NM_001113492) -53 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr10-102152107-1 chr10 102152007 102152207 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284388) promoter-TSS (NM_001284388) -69 NM_004741 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding Merged-chr9-134407515-1 chr9 134407415 134407615 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001291921, intron 1 of 8) CpG 933 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding Merged-chr12-45990681-1 chr12 45990581 45990781 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004719) promoter-TSS (NM_004719) -63 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding Merged-chr22_KI270733v1_random-173207-1 chr22_KI270733v1_random 173107 173307 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_003285).6 promoter-TSS (NR_003285).6 -749 NR_003285 100008587 Hs.426704 NR_003285 RNA5-8S5 RN5-8S1 RNA, 5.8S ribosomal 5 rRNA Merged-chr1-201461305-1 chr1 201461205 201461405 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 7866 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding Merged-chr1-12596070-1 chr1 12595970 12596170 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004753, intron 1 of 5) CpG 326 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding Merged-chr19-48637605-1 chr19 48637505 48637705 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001352) promoter-TSS (NM_001352) -55 NM_001352 1628 Hs.414480 NM_001352 ENSG00000105516 DBP DABP D-box binding PAR bZIP transcription factor protein-coding Merged-chr12-113966333-1 chr12 113966233 113966433 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146699) promoter-TSS (NM_001146699) 38 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 -0 RNA binding motif protein 19 protein-coding Merged-chr4-1346966-1 chr4 1346866 1347066 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317934) promoter-TSS (NM_001317934) -300 NM_001317934 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding Merged-chr12-113221207-1 chr12 113221107 113221307 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138451) promoter-TSS (NM_138451) -113 NM_138451 115811 Hs.568276 NM_138451 ENSG00000166578 IQCD 4933433C09Rik|CFAP84|DRC10 IQ motif containing D protein-coding Merged-chr11-4094662-1 chr11 4094562 4094762 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001318064) promoter-TSS (NM_001318064) -23 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding Merged-chr6-33323089-1 chr6 33322989 33323189 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001141970).3 promoter-TSS (NM_001141970).3 -73 NM_001141970 1616 Hs.336916 NM_001350 ENSG00000204209 DAXX BING2|DAP6|EAP1 death domain associated protein protein-coding Merged-chr14-99683981-1 chr14 99683881 99684081 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006668) promoter-TSS (NM_006668) -437 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding Merged-chr1-36224215-1 chr1 36224115 36224315 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005119) promoter-TSS (NM_005119) -197 NM_001321471 9967 Hs.744057 NM_005119 ENSG00000054118 THRAP3 TRAP150 thyroid hormone receptor associated protein 3 protein-coding Merged-chr1-93738517-1 chr1 93738417 93738617 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -56679 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding Merged-chr4-28376195-1 chr4 28376095 28376295 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -443387 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr6-148578360-1 chr6 148578260 148578460 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 69209 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding Merged-chr1-44355368-1 chr1 44355268 44355468 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001301699) promoter-TSS (NM_001301699) -89 NM_001301699 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding Merged-chr17-56787198-1 chr17 56787098 56787298 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER44C|DNA|TcMar-Tigger 46697 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 -0 chromosome 17 open reading frame 67 protein-coding Merged-chr17-41548149-1 chr17 41548049 41548249 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 6346 NR_038442 147093 Hs.680576 NR_038442 ENSG00000226629 LINC00974 -0 long intergenic non-protein coding RNA 974 ncRNA Merged-chr17-1717139-1 chr17 1717039 1717239 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_028502) promoter-TSS (NR_028502) 616 NM_001163673 124997 Hs.234572 NM_152348 ENSG00000167716 WDR81 CAMRQ2|PPP1R166|SORF-2 WD repeat domain 81 protein-coding Merged-chr15-73956930-1 chr15 73956830 73957030 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -28682 NR_040069 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 -0 LOXL1 antisense RNA 1 ncRNA Merged-chr1-25895524-1 chr1 25895424 25895624 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145454, intron 4 of 4) MER102b|DNA|hAT-Charlie 10629 NM_203401 3925 Hs.209983 NM_005563 ENSG00000117632 STMN1 C1orf215|LAP18|Lag|OP18|PP17|PP19|PR22|SMN stathmin 1 protein-coding Merged-chr1-8314432-1 chr1 8314332 8314532 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3653 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5 solute carrier family 45 member 1 protein-coding Merged-chr6-32195911-1 chr6 32195811 32196011 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022107).7 promoter-TSS (NM_022107).7 -388 NM_022107 63940 Hs.520046 NM_022107 ENSG00000213654 GPSM3 AGS4|C6orf9|G18|G18.1a|G18.1b|G18.2|NG1 G-protein signaling modulator 3 protein-coding Merged-chr14-31561268-1 chr14 31561168 31561368 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025152) promoter-TSS (NM_025152) -117 NM_025152 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|huInd1 nucleotide binding protein like protein-coding Merged-chr11-46293803-1 chr11 46293703 46293903 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 16165 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS cAMP responsive element binding protein 3 like 1 protein-coding Merged-chr6-41072757-1 chr6 41072657 41072857 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002505) promoter-TSS (NM_002505) -143 NM_001329685 221443 Hs.227457 NM_145063 ENSG00000124596 OARD1 C6orf130|TARG1|dJ34B21.3 O-acyl-ADP-ribose deacylase 1 protein-coding Merged-chr2-9656569-1 chr2 9656469 9656669 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25514 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding Merged-chr15-40807571-1 chr15 40807471 40807671 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018163) promoter-TSS (NM_018163) -93 NM_018163 55192 Hs.511069 NM_018163 ENSG00000104129 DNAJC17 -0 DnaJ heat shock protein family (Hsp40) member C17 protein-coding Merged-chr1-166906134-1 chr1 166906034 166906234 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -29717 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding Merged-chr12-75391093-1 chr12 75390993 75391193 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286549) promoter-TSS (NM_001286549) 23 NM_001270396 144321 Hs.406728 NM_152436 ENSG00000180481 GLIPR1L2 -0 GLI pathogenesis related 1 like 2 protein-coding Merged-chr19-13795226-1 chr19 13795126 13795326 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_023072) promoter-TSS (NM_023072) -234 NM_023072 65249 Hs.466015 NM_023072 ENSG00000132003 ZSWIM4 -0 zinc finger SWIM-type containing 4 protein-coding Merged-chr11-8604488-1 chr11 8604388 8604588 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -10199 NM_001289058 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 -0 serine/threonine kinase 33 protein-coding Merged-chr17-82458563-1 chr17 82458463 82458663 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031968) promoter-TSS (NM_031968) -101 NM_031968 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding Merged-chr19-58278854-1 chr19 58278754 58278954 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021089) promoter-TSS (NM_021089) -98 NM_021089 7554 Hs.590941 NM_021089 ENSG00000278129 ZNF8 HF.18|Zfp128 zinc finger protein 8 protein-coding Merged-chr17-64506657-1 chr17 64506557 64506757 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320597) promoter-TSS (NM_001320597) 29 NM_001320596 1655 Hs.279806 NM_004396 ENSG00000108654 DDX5 G17P1|HLR1|HUMP68|p68 DEAD-box helicase 5 protein-coding Merged-chr21-40737158-1 chr21 40737058 40737258 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001389, intron 1 of 32) intron (NM_001389, intron 1 of 32) -106391 NR_046774 100874326 Hs.679746 NR_046774 ENSG00000233756 DSCAM-IT1 zag4 DSCAM intronic transcript 1 ncRNA Merged-chr2-19711667-1 chr2 19711567 19711767 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic UCON78|DNA|DNA -157187 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 -0 long intergenic non-protein coding RNA 954 ncRNA Merged-chr2-42133154-1 chr2 42133054 42133254 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -36184 NM_001145076 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 echinoderm microtubule associated protein like 4 protein-coding Merged-chr5-139341806-1 chr5 139341706 139341906 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016480) promoter-TSS (NM_016480) -26 NM_016480 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding Merged-chr10-44301259-1 chr10 44301159 44301359 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 8509 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 -0 chromosome 10 open reading frame 142 protein-coding Merged-chr14-54396846-1 chr14 54396746 54396946 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005192) promoter-TSS (NM_005192) -22 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding Merged-chr22-41832934-1 chr22 41832834 41833034 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_103834) promoter-TSS (NR_103834) -145 NR_103834 6721 Hs.443258 NM_004599 ENSG00000198911 SREBF2 SREBP-2|SREBP2|bHLHd2 sterol regulatory element binding transcription factor 2 protein-coding Merged-chr1-8525988-1 chr1 8525888 8526088 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012102, intron 8 of 23) intron (NM_012102, intron 8 of 23) -31075 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA Merged-chr1-110634852-1 chr1 110634752 110634952 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3378 NM_001204269 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding Merged-chr2-222709467-1 chr2 222709367 222709567 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_058165, intron 5 of 5) intron (NM_058165, intron 5 of 5) 37729 NM_058165 116255 Hs.344090 NM_058165 ENSG00000124003 MOGAT1 DGAT2L|DGAT2L1|MGAT1 monoacylglycerol O-acyltransferase 1 protein-coding Merged-chr1-19398559-1 chr1 19398459 19398659 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 86148 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line beta subunit protein-coding Merged-chr5-134226165-1 chr5 134226065 134226265 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002715) promoter-TSS (NM_002715) 94 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding Merged-chr7-45111794-1 chr7 45111694 45111894 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001261834) promoter-TSS (NM_001261834) -47 NM_004749 9238 Hs.231411 NM_004749 ENSG00000136270 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding Merged-chr15-75043757-1 chr15 75043657 75043857 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301101, intron 3 of 4) X6A_LINE|LINE|CR1 488 NM_001301105 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding Merged-chr18-76565403-1 chr18 76565303 76565503 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 36748 NR_015417 284276 Hs.390287 NR_015417 ENSG00000263812 LINC00908 -0 long intergenic non-protein coding RNA 908 ncRNA Merged-chr12-122226095-1 chr12 122225995 122226195 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278304) promoter-TSS (NM_001278304) -245 NM_001278304 56616 Hs.169611 NM_019887 ENSG00000184047 DIABLO DFNA64|SMAC diablo IAP-binding mitochondrial protein protein-coding Merged-chr19-50511397-1 chr19 50511297 50511497 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270686) promoter-TSS (NM_001270686) -42 NM_001270639 126119 Hs.467151 NM_138334 ENSG00000161677 JOSD2 SBBI54 Josephin domain containing 2 protein-coding Merged-chr5-177517037-1 chr5 177516937 177517137 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001321732, exon 1 of 16) 5' UTR (NM_001321732, exon 1 of 16) 289 NM_016222 51428 Hs.484288 NM_016222 ENSG00000183258 DDX41 ABS|MPLPF DEAD-box helicase 41 protein-coding Merged-chr11-34916605-1 chr11 34916505 34916705 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015957) promoter-TSS (NM_015957) -194 NM_015957 51074 Hs.447794 NM_015957 ENSG00000149089 APIP APIP2|CGI-29|CGI29|MMRP19|hAPIP APAF1 interacting protein protein-coding Merged-chr1-236795122-1 chr1 236795022 236795222 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000254) promoter-TSS (NM_000254) -159 NM_001291939 4548 Hs.498187 NM_000254 ENSG00000116984 MTR HMAG|MS|cblG 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding Merged-chr18-3246192-1 chr18 3246092 3246292 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1290 NM_001303048 10627 Hs.190086 NM_006471 ENSG00000101608 MYL12A HEL-S-24|MLC-2B|MLCB|MRCL3|MRLC3|MYL2B myosin light chain 12A protein-coding Merged-chr16-72093682-1 chr16 72093582 72093782 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324354) promoter-TSS (NM_001324354) -31 NM_001324355 54957 Hs.134406 NM_017853 ENSG00000140830 TXNL4B DLP|Dim2 thioredoxin like 4B protein-coding Merged-chr8-91070081-1 chr8 91069981 91070181 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286745) promoter-TSS (NM_001286745) 108 NR_110439 100506365 Hs.153412 NR_110438 ENSG00000253738 OTUD6B-AS1 GS1-251I9.4 OTUD6B antisense RNA 1 (head to head) ncRNA Merged-chr10-72273800-1 chr10 72273700 72273900 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019058) promoter-TSS (NM_019058) -119 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding Merged-chr15-90954808-1 chr15 90954708 90954908 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017919) promoter-TSS (NM_001017919) -68 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 -0 RCC1 domain containing 1 protein-coding Merged-chr22-21556231-1 chr22 21556131 21556331 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001256355, intron 1 of 3) AluJb|SINE|Alu -4770 NM_001128633 150221 Hs.447643 NM_001128633 ENSG00000183246 RIMBP3C RIM-BP3.3|RIMBP3.3 RIMS binding protein 3C protein-coding Merged-chr2-219229787-1 chr2 219229687 219229887 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001077198) promoter-TSS (NM_001077198) 30 NM_018089 55139 Hs.437647 NM_018089 ENSG00000163516 ANKZF1 ZNF744 ankyrin repeat and zinc finger domain containing 1 protein-coding Merged-chr19-45178368-1 chr19 45178268 45178468 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270891) promoter-TSS (NM_001270891) -125 NM_001270892 79090 Hs.466929 NM_024108 ENSG00000007255 TRAPPC6A TRS33 trafficking protein particle complex 6A protein-coding Merged-chr6-30717704-1 chr6 30717604 30717804 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014641).7 promoter-TSS (NM_014641).7 -23 NM_014641 9656 Hs.653495 NM_014641 ENSG00000137337 MDC1 NFBD1 mediator of DNA damage checkpoint 1 protein-coding Merged-chr12-89352510-1 chr12 89352410 89352610 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001946, exon 1 of 3) 5' UTR (NM_001946, exon 1 of 3) 349 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding Merged-chr20-595781-1 chr20 595681 595881 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 14485 NM_004609 6939 Hs.437 NM_004609 ENSG00000125878 TCF15 EC2|PARAXIS|bHLHa40 transcription factor 15 (basic helix-loop-helix) protein-coding Merged-chr17-43360958-1 chr17 43360858 43361058 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 27940 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 -0 long intergenic non-protein coding RNA 910 ncRNA Merged-chr3-180602042-1 chr3 180601942 180602142 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042601) promoter-TSS (NM_001042601) -88 NM_133462 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding Merged-chr18-7038453-1 chr18 7038353 7038553 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005559, intron 11 of 62) intron (NM_005559, intron 11 of 62) 79361 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding Merged-chr6-158003675-1 chr6 158003575 158003775 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) 2568 NR_046796 100874300 Hs.742238 NR_046796 ENSG00000233496 SYNJ2-IT1 -0 SYNJ2 intronic transcript 1 ncRNA Merged-chr3-111071681-1 chr3 111071581 111071781 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243286) promoter-TSS (NM_001243286) -78 NM_015480 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding Merged-chr18-8800598-1 chr18 8800498 8800698 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015210, intron 10 of 16) intron (NM_015210, intron 10 of 16) 83227 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding Merged-chr17-75633043-1 chr17 75632943 75633143 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001162995) promoter-TSS (NM_001162995) -391 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding Merged-chr12-118052649-1 chr12 118052549 118052749 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 8562 NM_018639 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding Merged-chr21-37564526-1 chr21 37564426 37564626 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 144227 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding Merged-chr12-57078820-1 chr12 57078720 57078920 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130963) promoter-TSS (NM_001130963) -29 NM_015257 23306 Hs.591040 NM_015257 ENSG00000166881 NEMP1 TMEM194|TMEM194A nuclear envelope integral membrane protein 1 protein-coding Merged-chr22-41544587-1 chr22 41544487 41544687 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001018050) promoter-TSS (NM_001018050) 19 NM_001282884 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding Merged-chr1-12602178-1 chr1 12602078 12602278 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004753, intron 1 of 5) intron (NM_004753, intron 1 of 5) -5782 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding Merged-chr21-29130367-1 chr21 29130267 29130467 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286620) promoter-TSS (NM_001286620) -118 NM_001286620 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding Merged-chr20-48025156-1 chr20 48025056 48025256 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -35039 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 -0 long intergenic non-protein coding RNA 1522 ncRNA Merged-chr17-60677345-1 chr17 60677245 60677445 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330413) promoter-TSS (NM_001330413) -430 NM_001330413 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3, microtubule associated cell migration factor protein-coding Merged-chr17-78384283-1 chr17 78384183 78384383 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_111989, intron 1 of 8) intron (NR_111989, intron 1 of 8) 5665 NM_024419 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 -0 phosphatidylglycerophosphate synthase 1 protein-coding Merged-chr17-80678793-1 chr17 80678693 80678893 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 126839 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chrX-23884051-1 chrX 23883951 23884151 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026545, intron 1 of 7) L2c|LINE|L2 23889 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|Mic23|My025 apolipoprotein O protein-coding Merged-chr1-40040588-1 chr1 40040488 40040688 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001105530) promoter-TSS (NM_001105530) 5 NM_006367 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN adenylate cyclase associated protein 1 protein-coding Merged-chr6-113995917-1 chr6 113995817 113996017 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_125845, exon 4 of 10) non-coding (NR_125845, exon 4 of 10) -24722 NR_033441 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|RPD3|YAF1 histone deacetylase 2 protein-coding Merged-chr1-226940116-1 chr1 226940016 226940216 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020247) promoter-TSS (NM_020247) -121 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding Merged-chr15-67121210-1 chr15 67121110 67121310 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -4506 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Merged-chr7-81685149-1 chr7 81685049 81685249 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_126025, intron 1 of 10) MLT1I|LTR|ERVL-MaLR 6257 NR_126025 100128317 Hs.571267 NR_126025 ENSG00000233491 LOC100128317 -0 uncharacterized LOC100128317 ncRNA Merged-chr17-78862478-1 chr17 78862378 78862578 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003255, intron 3 of 4) intron (NM_003255, intron 3 of 4) -21951 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding Merged-chr6-116571337-1 chr6 116571237 116571437 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015952) promoter-TSS (NM_015952) -30 NM_015952 51389 Hs.532164 NM_015952 ENSG00000111832 RWDD1 CGI-24|PTD013 RWD domain containing 1 protein-coding Merged-chr19-14419420-1 chr19 14419320 14419520 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005804) promoter-TSS (NM_005804) -37 NR_046366 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding Merged-chr2-127516301-1 chr2 127516201 127516401 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_017969, intron 2 of 13) AluSx|SINE|Alu 10210 NM_017969 55677 Hs.469879 NM_017969 ENSG00000163166 IWS1 -0 IWS1, SUPT6H interacting protein protein-coding Merged-chr7-22726576-1 chr7 22726476 22726676 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000600) promoter-TSS (NM_000600) -566 NM_000600 3569 Hs.654458 NM_000600 ENSG00000136244 IL6 BSF-2|BSF2|CDF|HGF|HSF|IFN-beta-2|IFNB2|IL-6 interleukin 6 protein-coding Merged-chr22-42635722-1 chr22 42635622 42635822 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000398, intron 2 of 8) intron (NM_000398, intron 2 of 8) 4879 NM_001165877 267020 Hs.664737 NM_001165877 ENSG00000249222 ATP5L2 ATP5K2 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G2 protein-coding Merged-chr17-1516730-1 chr17 1516630 1516830 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_028514) promoter-TSS (NR_028514) 158 NM_016532 51763 Hs.632238 NM_016532 ENSG00000132376 INPP5K PPS|SKIP inositol polyphosphate-5-phosphatase K protein-coding Merged-chr14-101948196-1 chr14 101948096 101948296 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -16332 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding Merged-chr12-48716884-1 chr12 48716784 48716984 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001240, exon 1 of 9) 5' UTR (NM_001240, exon 1 of 9) 114 NM_001240 904 Hs.92308 NM_001240 ENSG00000129315 CCNT1 CCNT|CYCT1|HIVE1 cyclin T1 protein-coding Merged-chr22-43955426-1 chr22 43955326 43955526 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015380) promoter-TSS (NM_015380) 45 NM_015380 25813 Hs.505824 NM_015380 ENSG00000100347 SAMM50 CGI-51|OMP85|SAM50|TOB55|TRG-3|YNL026W SAMM50 sorting and assembly machinery component protein-coding Merged-chr19-2945116-1 chr19 2945016 2945216 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021217) promoter-TSS (NM_021217) -145 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding Merged-chr15-74546318-1 chr15 74546218 74546418 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006465, intron 2 of 8) intron (NM_006465, intron 2 of 8) 5141 NM_006465 10620 Hs.647642 NM_006465 ENSG00000179361 ARID3B BDP|DRIL2 AT-rich interaction domain 3B protein-coding Merged-chr16-30740568-1 chr16 30740468 30740668 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_006662) TTS (NM_006662) 377 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding Merged-chr9-114552079-1 chr9 114551979 114552179 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -35635 NM_004888 9550 Hs.388654 NM_004888 ENSG00000136888 ATP6V1G1 ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 ATPase H+ transporting V1 subunit G1 protein-coding Merged-chr1-25695211-1 chr1 25695111 25695311 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001289010, intron 2 of 11) intron (NM_001289010, intron 2 of 11) 77743 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding Merged-chr12-27524131-1 chr12 27524031 27524231 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198916) promoter-TSS (NM_001198916) 19 NM_001198916 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding Merged-chr6-149454674-1 chr6 149454574 149454774 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_207360, intron 4 of 5) intron (NM_207360, intron 4 of 5) 30338 NM_207360 340152 Hs.632618 NM_207360 ENSG00000178199 ZC3H12D C6orf95|MCPIP4|TFL|dJ281H8.1|p34 zinc finger CCCH-type containing 12D protein-coding Merged-chr4-102828162-1 chr4 102828062 102828262 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181892) promoter-TSS (NM_181892) 18 NM_181889 7323 Hs.518773 NM_003340 ENSG00000109332 UBE2D3 E2(17)KB3|UBC4/5|UBCH5C ubiquitin conjugating enzyme E2 D3 protein-coding Merged-chr5-89878313-1 chr5 89878213 89878413 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 138407 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA Merged-chr2-134918653-1 chr2 134918553 134918753 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320748) promoter-TSS (NM_001320748) -47 NR_036549 100129961 Hs.729028 NR_036549 CCNT2-AS1 -0 CCNT2 antisense RNA 1 ncRNA Merged-chr17-48025178-1 chr17 48025078 48025278 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_016429) TTS (NM_016429) 12069 NR_029687 406943 NR_029687 ENSG00000207947 MIR152 MIRN152|mir-152 microRNA 152 ncRNA Merged-chr4-1192292-1 chr4 1192192 1192392 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001199021, intron 1 of 7) intron (NM_001199021, intron 1 of 7) 16670 NR_024569 100130872 Hs.302963 NR_024569 LOC100130872 -0 uncharacterized LOC100130872 ncRNA Merged-chr10-9192784-1 chr10 9192684 9192884 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MA8|LINE|L1 -82829 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 -0 long intergenic non-protein coding RNA 709 ncRNA Merged-chr8-41490479-1 chr8 41490379 41490579 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001174124) promoter-TSS (NM_001174124) -83 NM_016099 51125 Hs.654773 NM_016099 ENSG00000147533 GOLGA7 GCP16|GOLGA3AP1|GOLGA7A|HSPC041 golgin A7 protein-coding Merged-chr10-8139088-1 chr10 8138988 8139188 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 84384 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding Merged-chr7-26864785-1 chr7 26864685 26864885 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003930) promoter-TSS (NM_003930) -42 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding Merged-chr11-65135050-1 chr11 65134950 65135150 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_172230) promoter-TSS (NM_172230) -518 NM_172230 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding Merged-chr17-57903373-1 chr17 57903273 57903473 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001292025) promoter-TSS (NM_001292025) 16 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 -0 CUE domain containing 1 protein-coding Merged-chr22-31055784-1 chr22 31055684 31055884 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25512 NM_006932 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN -0 smoothelin protein-coding Merged-chr6-52284896-1 chr6 52284796 52284996 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270472) promoter-TSS (NM_001270472) -15 NM_001270472 4172 Hs.179565 NM_002388 ENSG00000112118 MCM3 HCC5|P1-MCM3|P1.h|RLFB minichromosome maintenance complex component 3 protein-coding Merged-chr5-43042983-1 chr5 43042883 43043083 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_015447, exon 1 of 2) non-coding (NR_015447, exon 1 of 2) 849 NR_015447 153684 Hs.259625 NR_015447 ENSG00000215068 LOC153684 -0 uncharacterized LOC153684 ncRNA Merged-chr17-35063697-1 chr17 35063597 35063797 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017368) promoter-TSS (NM_001017368) 43 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding Merged-chr2-64751054-1 chr2 64750954 64751154 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (GGAGC)n|Simple_repeat|Simple_repeat -97142 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2 SERTA domain containing 2 protein-coding Merged-chr7-13991545-1 chr7 13991445 13991645 0 5.770000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001163148) promoter-TSS (NM_001163148) -120 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding Merged-chr1-18902893-2 chr1 18902778 18903009 0 5.765000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003748) promoter-TSS (NM_003748) -94 NM_003748 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding Merged-chr19-797086-2 chr19 796985 797188 0 5.755000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002819) promoter-TSS (NM_002819) -306 NM_031991 5725 Hs.172550 NM_002819 ENSG00000011304 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding Merged-chr19-10569111-2 chr19 10569003 10569219 0 5.645000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001800) promoter-TSS (NM_001800) -132 NM_079421 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding Merged-chr5-167699597-2 chr5 167699436 167699758 0 5.630000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001122679, intron 2 of 28) intron (NM_001122679, intron 2 of 28) -55339 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding Merged-chr2-197435142-2 chr2 197435027 197435258 0 5.630000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001308824) promoter-TSS (NM_001308824) -49 NM_001308824 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding Merged-chr17-50639417-2 chr17 50639284 50639551 0 5.630000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003786, intron 1 of 30) intron (NM_003786, intron 1 of 30) 4560 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding Merged-chr19-45792948-2 chr19 45792845 45793052 0 5.620000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004943) promoter-TSS (NM_004943) -146 NM_004943 1762 Hs.515474 NM_004943 ENSG00000185800 DMWD D19S593E|DMR-N9|DMRN9|gene59 dystrophia myotonica, WD repeat containing protein-coding Merged-chr17-7572621-2 chr17 7572506 7572737 0 5.620000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001416) promoter-TSS (NM_001416) -85 NM_001416 1973 Hs.129673 NM_001416 ENSG00000161960 EIF4A1 DDX2A|EIF-4A|EIF4A|eIF-4A-I|eIF4A-I eukaryotic translation initiation factor 4A1 protein-coding Merged-chr16-50741781-2 chr16 50741633 50741929 0 5.620000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_130462) promoter-TSS (NR_130462) -269 NM_001042355 1540 Hs.578973 NM_015247 ENSG00000083799 CYLD BRSS|CDMT|CYLD1|CYLDI|EAC|MFT|MFT1|SBS|TEM|USPL2 CYLD lysine 63 deubiquitinase protein-coding Merged-chr3-107216882-2 chr3 107216776 107216988 0 5.615000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_028303, intron 1 of 3) intron (NR_028303, intron 1 of 3) 23756 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 -0 long intergenic non-protein coding RNA 882 ncRNA Merged-chr12-56118200-2 chr12 56118080 56118321 0 5.615000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001303124) promoter-TSS (NM_001303124) -20 NM_001303124 84872 Hs.632706 NM_032786 ENSG00000135482 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding Merged-chr6-136289925-2 chr6 136289814 136290037 0 5.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001077440) promoter-TSS (NM_001077440) -74 NM_001077441 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding Merged-chr11-45918086-2 chr11 45917936 45918237 0 5.600000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_057174) promoter-TSS (NM_057174) 37 NM_057174 9409 Hs.100915 NM_004813 ENSG00000121680 PEX16 PBD8A|PBD8B peroxisomal biogenesis factor 16 protein-coding Merged-chr17-77285801-2 chr17 77285677 77285926 0 5.510000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001293695, intron 1 of 10) intron (NM_001293695, intron 1 of 10) -2090 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr6-129710221-1 chr6 129710121 129710321 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_033515) promoter-TSS (NM_033515) 4 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding Merged-chr5-82406431-1 chr5 82406331 82406531 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 126969 NM_001017971 92270 Hs.729805 NM_001017971 ENSG00000205464 ATP6AP1L -0 ATPase H+ transporting accessory protein 1 like protein-coding Merged-chr11-62832158-1 chr11 62832058 62832258 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001244666) promoter-TSS (NM_001244666) -67 NM_001244666 6811 Hs.654602 NM_003164 ENSG00000162236 STX5 SED5|STX5A syntaxin 5 protein-coding Merged-chr1-151282173-1 chr1 151282073 151282273 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_020832) promoter-TSS (NM_020832) -139 NM_001304763 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding Merged-chr18-67525494-1 chr18 67525394 67525594 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) -8764 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4 dermatan sulfate epimerase-like protein-coding Merged-chr15-91963339-1 chr15 91963239 91963439 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013272, intron 2 of 9) PABL_B|LTR|ERV1 109039 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding Merged-chr17-72684132-1 chr17 72684032 72684232 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_139177, intron 7 of 9) intron (NM_139177, intron 7 of 9) -43660 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA Merged-chr1-26999581-1 chr1 26999481 26999681 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001013642, intron 1 of 1) intron (NM_001013642, intron 1 of 1) 5877 NM_001013642 388610 Hs.355747 NM_001013642 ENSG00000253368 TRNP1 C1orf225|TNRP TMF1-regulated nuclear protein 1 protein-coding Merged-chr3-189324834-1 chr3 189324734 189324934 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -84240 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 -0 TPRG1 antisense RNA 2 ncRNA Merged-chr12-70051901-1 chr12 70051801 70052001 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1P1|LINE|L1 -191093 NM_014515 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding Merged-chr5-938297-1 chr5 938197 938397 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 45443 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP thyroid hormone receptor interactor 13 protein-coding Merged-chr4-12627430-1 chr4 12627330 12627530 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1PA16|LINE|L1 403979 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr1-5992560-2 chr1 5992424 5992696 0 5.490000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_015102) promoter-TSS (NM_015102) -87 NM_001291593 261734 Hs.462348 NM_015102 ENSG00000131697 NPHP4 POC10|SLSN4 nephrocystin 4 protein-coding Merged-chr12-82070680-1 chr12 82070580 82070780 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic THE1C-int|LTR|ERVL-MaLR 116961 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LOC101928449 -0 uncharacterized LOC101928449 ncRNA Merged-chr1-27234623-1 chr1 27234523 27234723 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_001276252, exon 1 of 16) 5' UTR (NM_001276252, exon 1 of 16) 107 NM_001276252 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding Merged-chr5-36507494-2 chr5 36507381 36507608 0 5.490000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -98861 NM_001166696 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding Merged-chr1-243255926-1 chr1 243255826 243256026 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006642).2 promoter-TSS (NM_006642).2 -79 NM_006642 10806 Hs.591530 NM_006642 ENSG00000054282 SDCCAG8 BBS16|CCCAP|CCCAP SLSN7|HSPC085|NPHP10|NY-CO-8|SLSN7|hCCCAP serologically defined colon cancer antigen 8 protein-coding Merged-chr8-130263984-1 chr8 130263884 130264084 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001247996, intron 4 of 30) MIRc|SINE|MIR 32549 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA Merged-chr18-54776408-1 chr18 54776308 54776508 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic LTR84b|LTR|ERVL -52069 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding Merged-chr17-43733173-1 chr17 43733073 43733273 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER21C|LTR|ERVL 25615 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding Merged-chr5-34585893-1 chr5 34585793 34585993 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -70435 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr5-1215414-1 chr5 1215314 1215514 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001003841, intron 6 of 11) L1MB7|LINE|L1 -9941 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding Merged-chr4-28370750-1 chr4 28370650 28370850 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -448832 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr9-76686761-1 chr9 76686661 76686861 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 8 of 15) intron (NR_131751, intron 8 of 15) 5654 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr5-136053762-2 chr5 136053635 136053890 0 5.490000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000358, intron 8 of 16) intron (NM_000358, intron 8 of 16) 24867 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding Merged-chr16-2839061-1 chr16 2838961 2839161 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_026864) TTS (NR_026864) 3690 NR_026864 124221 Hs.434388 NM_178453 ENSG00000172460 PRSS30P Disp|TMPRSS8|TMPRSS8P protease, serine, 30 pseudogene pseudo Merged-chr5-34524225-1 chr5 34524125 34524325 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -132103 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr3-114056629-2 chr3 114056507 114056751 0 5.490000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_024638) promoter-TSS (NM_024638) -16 NM_020817 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding Merged-chr19-51367623-1 chr19 51367523 51367723 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_152353, intron 2 of 3) CpG-15033 -1205 NM_001985 2109 Hs.348531 NM_001985 ENSG00000105379 ETFB FP585|MADD electron transfer flavoprotein beta subunit protein-coding Merged-chr17-45293531-1 chr17 45293431 45293631 0 5.490000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003954, intron 1 of 15) intron (NM_003954, intron 1 of 15) 23533 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding Merged-chr19-4402431-2 chr19 4402313 4402550 0 5.480000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_005483) promoter-TSS (NM_005483) -232 NM_005483 10036 Hs.79018 NM_005483 ENSG00000167670 CHAF1A CAF-1|CAF1|CAF1B|CAF1P150|P150 chromatin assembly factor 1 subunit A protein-coding Merged-chr16-75464778-2 chr16 75464667 75464889 0 5.480000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001304997) promoter-TSS (NM_001304997) -41 NM_001304998 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding Merged-chr19-4713721-1 chr19 4713621 4713821 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139159, intron 4 of 21) intron (NM_139159, intron 4 of 21) 10122 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding Merged-chr1-3857291-1 chr1 3857191 3857391 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014704) promoter-TSS (NM_014704) 24 NM_001320136 1677 Hs.133089 NM_004402 ENSG00000169598 DFFB CAD|CPAN|DFF-40|DFF2|DFF40 DNA fragmentation factor subunit beta protein-coding Merged-chr19-36054351-1 chr19 36054251 36054451 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001083961) promoter-TSS (NM_001083961) 411 NM_001331104 199745 Hs.350209 NM_152658 ENSG00000161277 THAP8 -0 THAP domain containing 8 protein-coding Merged-chr12-102062152-1 chr12 102062052 102062252 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001301107) promoter-TSS (NM_001301107) -28 NM_016053 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding Merged-chr19-39436044-1 chr19 39435944 39436144 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321111) promoter-TSS (NM_001321111) -24 NM_001321111 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding Merged-chr1-31956112-1 chr1 31956012 31956212 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -17725 NM_080391 8073 Hs.470477 NM_003479 ENSG00000184007 PTP4A2 HH13|HH7-2|HU-PP-1|OV-1|PRL-2|PRL2|PTP4A|PTPCAAX2|ptp-IV1a|ptp-IV1b protein tyrosine phosphatase type IVA, member 2 protein-coding Merged-chr16-31459884-1 chr16 31459784 31459984 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001288767, exon 3 of 8) exon (NM_001288767, exon 3 of 8) 888 NM_024742 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding Merged-chr11-34654231-1 chr11 34654131 34654331 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012153, intron 6 of 8) intron (NM_012153, intron 6 of 8) 21767 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding Merged-chr1-21252311-1 chr1 21252211 21252411 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001397, intron 8 of 18) intron (NM_001397, intron 8 of 18) 27379 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding Merged-chr7-73715845-1 chr7 73715745 73715945 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004603, intron 1 of 9) intron (NM_004603, intron 1 of 9) 3842 NM_001165903 6804 Hs.647024 NM_004603 ENSG00000106089 STX1A HPC-1|P35-1|STX1|SYN1A syntaxin 1A protein-coding Merged-chr1-1512013-1 chr1 1511913 1512113 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001170536) promoter-TSS (NM_001170536) -130 NM_018188 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family, AAA domain containing 3A protein-coding Merged-chr3-120094637-1 chr3 120094537 120094737 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146156) promoter-TSS (NM_001146156) -220 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B -0 glycogen synthase kinase 3 beta protein-coding Merged-chr19-1021684-1 chr19 1021584 1021784 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033026) promoter-TSS (NM_001033026) 162 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA Merged-chr19-10566164-1 chr19 10566064 10566264 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_023008) promoter-TSS (NM_023008) -138 NM_023008 65095 Hs.709967 NM_023008 ENSG00000129347 KRI1 -0 KRI1 homolog protein-coding Merged-chr6-161369508-1 chr6 161369408 161369608 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004562, intron 10 of 11) intron (NM_004562, intron 10 of 11) -95433 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding Merged-chr1-21255453-1 chr1 21255353 21255553 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001397, intron 8 of 18) intron (NM_001397, intron 8 of 18) 24237 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding Merged-chr19-3968803-1 chr19 3968703 3968903 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001348, intron 2 of 8) intron (NM_001348, intron 2 of 8) 2320 NM_001348 1613 Hs.631844 NM_001348 ENSG00000167657 DAPK3 DLK|ZIP|ZIPK death associated protein kinase 3 protein-coding Merged-chr16-68237679-1 chr16 68237579 68237779 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG-9862 -1446 NM_024939 80004 Hs.436585 NM_024939 ENSG00000103067 ESRP2 RBM35B epithelial splicing regulatory protein 2 protein-coding Merged-chr9-114277548-1 chr9 114277448 114277648 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032888, intron 37 of 60) intron (NM_032888, intron 37 of 60) -45475 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding Merged-chr5-115366345-1 chr5 115366245 115366445 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -69584 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding Merged-chr19-2169149-1 chr19 2169049 2169249 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032482, intron 1 of 27) intron (NM_032482, intron 1 of 27) 5000 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding Merged-chr17-73798394-1 chr17 73798294 73798494 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_040020, intron 5 of 6) intron (NR_040020, intron 5 of 6) 11572 NR_040020 400620 Hs.348644 NR_040020 ENSG00000234721 LINC02092 -0 long intergenic non-protein coding RNA 2092 ncRNA Merged-chr2-132416410-1 chr2 132416310 132416510 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001508) promoter-TSS (NM_001508) -164 NM_001508 2863 Hs.432395 NM_001508 ENSG00000183840 GPR39 -0 G protein-coupled receptor 39 protein-coding Merged-chr12-571638-1 chr12 571538 571738 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) 14848 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 -0 uncharacterized LOC105369595 ncRNA Merged-chr3-136752578-1 chr3 136752478 136752678 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005862) promoter-TSS (NM_005862) -175 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 SA1|SCC3A stromal antigen 1 protein-coding Merged-chr12-121687143-1 chr12 121687043 121687243 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -17489 NM_173855 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 -0 MORN repeat containing 3 protein-coding Merged-chr7-50535025-1 chr7 50534925 50535125 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_033845, intron 1 of 4) intron (NR_033845, intron 1 of 4) 3266 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 -0 DDC antisense RNA 1 ncRNA Merged-chr1-24046415-1 chr1 24046315 24046515 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 65760 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 -0 myomesin 3 protein-coding Merged-chr6-158999878-1 chr6 158999778 158999978 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_031924, exon 1 of 8) exon (NM_031924, exon 1 of 8) 309 NM_031924 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke 3 homolog protein-coding Merged-chr9-109440877-1 chr9 109440777 109440977 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145369, intron 2 of 20) L2b|LINE|L2 10507 NM_001145369 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase, non-receptor type 3 protein-coding Merged-chr10-8508548-1 chr10 8508448 8508648 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 85843 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr10-7788116-1 chr10 7788016 7788216 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012311) promoter-TSS (NM_012311) 12 NM_001320886 509 Hs.271135 NM_005174 ENSG00000165629 ATP5C1 ATP5C|ATP5CL1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 protein-coding Merged-chr6-81752759-1 chr6 81752659 81752859 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017633) promoter-TSS (NM_017633) -48 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 FAM46A C6orf37|XTP11 family with sequence similarity 46 member A protein-coding Merged-chr11-65418810-1 chr11 65418710 65418910 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3988 NR_131012 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA Merged-chr11-65421362-1 chr11 65421262 65421462 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1436 NR_131012 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA Merged-chr7-25862528-1 chr7 25862428 25862628 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 87458 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA Merged-chr9-133133898-1 chr9 133133798 133133998 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -2741 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding Merged-chr4-112637121-1 chr4 112637021 112637221 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018392) promoter-TSS (NM_018392) -126 NM_018392 55345 Hs.380346 NM_018392 ENSG00000138658 ZGRF1 C4orf21 zinc finger GRF-type containing 1 protein-coding Merged-chr10-8530646-1 chr10 8530546 8530746 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 63745 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr16-66927317-1 chr16 66927217 66927417 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1781 NM_001128850 6236 Hs.1027 NM_004165 ENSG00000166592 RRAD RAD|RAD1|REM3 RRAD, Ras related glycolysis inhibitor and calcium channel regulator protein-coding Merged-chr5-34771553-1 chr5 34771453 34771653 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145523, intron 2 of 16) intron (NM_001145523, intron 2 of 16) -30765 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA Merged-chr10-79440842-1 chr10 79440742 79440942 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153367, intron 1 of 3) intron (NM_153367, intron 1 of 3) 4785 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding Merged-chr16-86952100-1 chr16 86952000 86952200 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -105684 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LOC440390 -0 uncharacterized LOC440390 ncRNA Merged-chr8-9088875-1 chr8 9088775 9088975 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 40430 NR_039804 100616350 NR_039804 ENSG00000263407 MIR4660 -0 microRNA 4660 ncRNA Merged-chr1-248873791-1 chr1 248873691 248873891 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -14675 NM_001193328 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding Merged-chr12-127559852-1 chr12 127559752 127559952 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 76615 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 -0 uncharacterized LOC101927637 ncRNA Merged-chr17-59852004-1 chr17 59851904 59852104 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 10738 NR_029493 406991 Hs.444569 NR_029493 ENSG00000062716 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA Merged-chr1-21783704-1 chr1 21783604 21783804 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001032730) promoter-TSS (NM_001032730) -509 NM_001330394 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding Merged-chr10-70664904-1 chr10 70664804 70665004 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7602 NM_139155 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 -0 ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding Merged-chr18-69745443-1 chr18 69745343 69745543 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152721, intron 6 of 7) intron (NM_152721, intron 6 of 7) 202410 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding Merged-chr7-74079387-1 chr7 74079287 74079487 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4390 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding Merged-chr9-127735430-1 chr9 127735330 127735530 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001085347) promoter-TSS (NM_001085347) -81 NM_001252018 27433 Hs.444106 NM_130459 ENSG00000160404 TOR2A TORP1 torsin family 2 member A protein-coding Merged-chr18-48834783-1 chr18 48834683 48834883 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014772, intron 10 of 11) intron (NM_014772, intron 10 of 11) 108024 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding Merged-chr17-39927662-1 chr17 39927562 39927762 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320801) promoter-TSS (NM_001320801) 142 NM_139280 94103 Hs.514151 NM_016471 ENSG00000172057 ORMDL3 -0 ORMDL sphingolipid biosynthesis regulator 3 protein-coding Merged-chr9-125241493-1 chr9 125241393 125241593 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005347) promoter-TSS (NM_005347) -106 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding Merged-chr14-100476552-1 chr14 100476452 100476652 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024515, intron 3 of 6) intron (NM_024515, intron 3 of 6) 91518 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN -0 brain enriched guanylate kinase associated protein-coding Merged-chr1-231337893-1 chr1 231337793 231337993 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_175876) promoter-TSS (NM_175876) -21 NM_175876 149371 Hs.356198 NM_175876 ENSG00000116903 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding Merged-chr6-152983195-1 chr6 152983095 152983295 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012177) promoter-TSS (NM_012177) -113 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding Merged-chr17-76515441-1 chr17 76515341 76515541 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -12145 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 progressive rod-cone degeneration protein-coding Merged-chr17-38800011-1 chr17 38799911 38800111 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003559) promoter-TSS (NM_003559) -106 NM_003559 8396 Hs.260603 NM_003559 ENSG00000276293 PIP4K2B PI5P4KB|PIP5K2B|PIP5KIIB|PIP5KIIbeta|PIP5P4KB phosphatidylinositol-5-phosphate 4-kinase type 2 beta protein-coding Merged-chr8-37142931-1 chr8 37142831 37143031 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 350982 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 -0 long intergenic non-protein coding RNA 1605 ncRNA Merged-chr2-240251231-1 chr2 240251131 240251331 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -110575 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding Merged-chr17-44901867-1 chr17 44901767 44901967 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258398, intron 3 of 3) intron (NM_001258398, intron 3 of 3) 2155 NM_001258397 388389 Hs.743398 NM_213607 ENSG00000167131 CCDC103 CILD17|PR46b|SMH coiled-coil domain containing 103 protein-coding Merged-chr17-73292266-1 chr17 73292166 73292366 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 19738 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding Merged-chr2-19073820-1 chr2 19073720 19073920 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -46849 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 -0 long intergenic non-protein coding RNA 1376 ncRNA Merged-chr4-73069841-1 chr4 73069741 73069941 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001297732) promoter-TSS (NM_001297732) -82 NM_001297733 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS COX18, cytochrome c oxidase assembly factor protein-coding Merged-chr1-28643135-1 chr1 28643035 28643235 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135218) promoter-TSS (NM_001135218) -43 NM_005644 6883 Hs.530251 NM_005644 ENSG00000120656 TAF12 TAF2J|TAFII20 TATA-box binding protein associated factor 12 protein-coding Merged-chr10-12043316-1 chr10 12043216 12043416 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_080599) promoter-TSS (NM_080599) -146 NM_080599 26019 Hs.370689 NM_015542 ENSG00000151461 UPF2 HUPF2|RENT2|smg-3 UPF2 regulator of nonsense transcripts homolog (yeast) protein-coding Merged-chrX-23504318-1 chrX 23504218 23504418 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -163210 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding Merged-chr2-190319898-1 chr2 190319798 190319998 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_014362, exon 1 of 14) 5' UTR (NM_014362, exon 1 of 14) 147 NM_014362 26275 Hs.656685 NM_014362 ENSG00000198130 HIBCH HIBYLCOAH 3-hydroxyisobutyryl-CoA hydrolase protein-coding Merged-chr19-58305324-1 chr19 58305224 58305424 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_144445) promoter-TSS (NR_144445) -50 NR_144445 105372481 Hs.435404 NR_144445 ENSG00000142396 ERVK3-1 -0 endogenous retrovirus group K3 member 1 ncRNA Merged-chr5-38468417-1 chr5 38468317 38468517 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 22941 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding Merged-chr4-147578164-1 chr4 147578064 147578264 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1N2|LTR|ERVL-MaLR -39224 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding Merged-chr16-30634389-1 chr16 30634289 30634489 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -16313 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 -0 proline rich 14 protein-coding Merged-chr5-146203505-1 chr5 146203405 146203605 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018989) promoter-TSS (NM_018989) -95 NM_018989 54439 Hs.61441 NM_018989 ENSG00000091009 RBM27 ARRS1|Psc1|ZC3H18|ZC3H20 RNA binding motif protein 27 protein-coding Merged-chr14-77321352-1 chr14 77321252 77321452 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013382) promoter-TSS (NM_013382) 465 NM_145871 2954 Hs.655292 NM_001513 ENSG00000100577 GSTZ1 GSTZ1-1|MAAI|MAI glutathione S-transferase zeta 1 protein-coding Merged-chr10-102503750-1 chr10 102503650 102503850 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005736) promoter-TSS (NM_005736) -212 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding Merged-chr3-116005545-1 chr3 116005445 116005645 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002338, intron 3 of 6) intron (NM_002338, intron 3 of 6) -354479 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 -0 LSAMP antisense RNA 1 ncRNA Merged-chr17-55750976-1 chr17 55750876 55751076 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021213) promoter-TSS (NM_021213) -3 NM_001330377 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding Merged-chr15-20659766-1 chr15 20659666 20659866 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 96385 NR_027992 606 Hs.657985 NR_027992 NBEAP1 BCL8|BCL8A neurobeachin pseudogene 1 pseudo Merged-chr17-40560416-1 chr17 40560316 40560516 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001301718) promoter-TSS (NM_001301718) -22 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding Merged-chr17-82154066-1 chr17 82153966 82154166 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001316321, exon 15 of 15) 3' UTR (NM_001316321, exon 15 of 15) -55836 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding Merged-chr19-35758079-1 chr19 35757979 35758179 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001039887) promoter-TSS (NM_001039887) -64 NM_001039887 148137 Hs.527982 NM_144692 ENSG00000167595 PROSER3 C19orf55 proline and serine rich 3 protein-coding Merged-chr2-27489940-1 chr2 27489840 27490040 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015662) promoter-TSS (NM_015662) -129 NM_015662 26160 Hs.127401 NM_015662 ENSG00000138002 IFT172 BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding Merged-chr6-154962950-1 chr6 154962850 154963050 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 109590 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C -0 microRNA 1273c ncRNA Merged-chr18-80034132-1 chr18 80034032 80034232 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001171967) promoter-TSS (NM_001171967) -197 NM_001305563 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding Merged-chr21-26923783-1 chr21 26923683 26923883 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_007038, exon 8 of 8) 3' UTR (NM_007038, exon 8 of 8) -30178 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 -0 microRNA 4759 ncRNA Merged-chr14-93959513-1 chr14 93959413 93959613 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001202429, intron 2 of 9) intron (NM_001202429, intron 2 of 9) -2092 NM_016150 51676 Hs.510327 NM_016150 ENSG00000100628 ASB2 ASB-2 ankyrin repeat and SOCS box containing 2 protein-coding Merged-chr16-23557501-1 chr16 23557401 23557601 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019116) promoter-TSS (NM_019116) -40 NM_019116 56061 Hs.3459 NM_019116 ENSG00000103353 UBFD1 UBPH ubiquitin family domain containing 1 protein-coding Merged-chr17-72725671-1 chr17 72725571 72725771 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139177, intron 7 of 9) intron (NM_139177, intron 7 of 9) -85199 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA Merged-chr5-159975558-1 chr5 159975458 159975658 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33542 NM_001282500 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding Merged-chr1-21491001-1 chr1 21490901 21491101 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR28C|LTR|ERV1 -18357 NM_001127501 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding Merged-chr21-29073762-1 chr21 29073662 29073862 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282909) promoter-TSS (NM_001282909) 35 NM_001282909 10694 Hs.125113 NM_006585 ENSG00000156261 CCT8 C21orf112|Cctq|D21S246|PRED71 chaperonin containing TCP1 subunit 8 protein-coding Merged-chr12-112013266-1 chr12 112013166 112013366 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001034025) promoter-TSS (NM_001034025) -47 NM_001193453 89894 Hs.506815 NM_138341 ENSG00000198270 TMEM116 -0 transmembrane protein 116 protein-coding Merged-chr18-55275732-1 chr18 55275632 55275832 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001330604, exon 10 of 20) exon (NM_001330604, exon 10 of 20) 26889 NM_001243236 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding Merged-chr15-40069324-1 chr15 40069224 40069424 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 30013 NR_040059 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 -0 SRP14 antisense RNA1 (head to head) ncRNA Merged-chr11-65615591-1 chr11 65615491 65615691 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032223) promoter-TSS (NM_032223) -721 NM_032223 399909 Hs.380801 NM_032223 ENSG00000197136 PCNX3 PCNXL3 pecanex homolog 3 (Drosophila) protein-coding Merged-chr13-68830911-1 chr13 68830811 68831011 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic THE1B-int|LTR|ERVL-MaLR 54414 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 -0 long intergenic non-protein coding RNA 550 ncRNA Merged-chr15-60371470-1 chr15 60371370 60371570 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004039, intron 3 of 12) intron (NM_004039, intron 3 of 12) 26516 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding Merged-chr19-18046178-1 chr19 18046078 18046278 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluSx1|SINE|Alu 38010 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding Merged-chr5-43018055-1 chr5 43017955 43018155 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_034086, exon 1 of 2) non-coding (NR_034086, exon 1 of 2) 756 NR_034086 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 -0 uncharacterized LOC648987 ncRNA Merged-chr17-68247934-1 chr17 68247834 68248034 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001289056) promoter-TSS (NM_001289056) -70 NM_001033570 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 -0 archaelysin family metallopeptidase 2 protein-coding Merged-chr9-127519544-1 chr9 127519444 127519644 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001035534, intron 5 of 13) intron (NM_001035534, intron 5 of 13) 49573 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 FAM129B C9orf88|MEG-3|MINERVA|OC58|bA356B19.6 family with sequence similarity 129 member B protein-coding Merged-chr19-17419851-1 chr19 17419751 17419951 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138401) promoter-TSS (NM_138401) 4 NM_138401 93343 Hs.515243 NM_138401 ENSG00000141971 MVB12A CFBP|FAM125A multivesicular body subunit 12A protein-coding Merged-chr3-93980048-1 chr3 93979948 93980148 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135621) promoter-TSS (NR_135621) -91 NM_001321328 200894 Hs.533086 NM_144996 ENSG00000169379 ARL13B ARL2L1|JBTS8 ADP ribosylation factor like GTPase 13B protein-coding Merged-chr17-44007011-1 chr17 44006911 44007111 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153006, intron 4 of 6) CpG-11225 2347 NM_153006 162417 Hs.8876 NM_153006 ENSG00000161653 NAGS AGAS|ARGA N-acetylglutamate synthase protein-coding Merged-chr2-64917859-1 chr2 64917759 64917959 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_036586, intron 1 of 2) intron (NR_036586, intron 1 of 2) 14588 NR_036586 400958 Hs.591565 NR_036586 LOC400958 -0 uncharacterized LOC400958 ncRNA Merged-chr19-14136909-1 chr19 14136809 14137009 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018154) promoter-TSS (NM_018154) -243 NR_045214 100507373 Hs.720437 NR_045214 ENSG00000267169 LOC100507373 -0 uncharacterized LOC100507373 ncRNA Merged-chr19-42076035-1 chr19 42075935 42076135 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022752) promoter-TSS (NM_022752) -103 NM_022752 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding Merged-chr1-54764562-1 chr1 54764462 54764662 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152268) promoter-TSS (NM_152268) -9 NM_152268 25973 Hs.380169 NM_152268 ENSG00000162396 PARS2 MT-PRORS|proRS prolyl-tRNA synthetase 2 mitochondrial (putative) protein-coding Merged-chr11-17276618-1 chr11 17276518 17276718 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005013) promoter-TSS (NM_005013) -100 NM_001330227 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding Merged-chr11-66312828-1 chr11 66312728 66312928 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 4216 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding Merged-chr17-42322904-1 chr17 42322804 42323004 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_213662, intron 20 of 23) intron (NM_213662, intron 20 of 23) 34848 NM_001288720 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding Merged-chr17-57875524-1 chr17 57875424 57875624 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001292025, intron 3 of 10) intron (NM_001292025, intron 3 of 10) -25452 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding Merged-chr19-19776518-1 chr19 19776418 19776618 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026956) promoter-TSS (NR_026956) -105 NR_026956 284440 Hs.665307 NR_026956 LINC00663 -0 long intergenic non-protein coding RNA 663 ncRNA Merged-chr5-150317380-1 chr5 150317280 150317480 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14418 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding Merged-chr17-38901161-1 chr17 38901061 38901261 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001271608, intron 3 of 5) intron (NM_001271608, intron 3 of 5) -13818 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA Merged-chr5-39399640-1 chr5 39399540 39399740 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001343, intron 1 of 14) intron (NM_001343, intron 1 of 14) 25593 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB2, clathrin adaptor protein protein-coding Merged-chr6-161257867-1 chr6 161257767 161257967 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020133, intron 1 of 8) L3|LINE|CR1 16208 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding Merged-chr3-120095095-1 chr3 120094995 120095195 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146156) promoter-TSS (NM_001146156) -678 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B -0 glycogen synthase kinase 3 beta protein-coding Merged-chr1-245716240-1 chr1 245716140 245716340 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 561255 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B -0 kinesin family member 26B protein-coding Merged-chr12-52147417-1 chr12 52147317 52147517 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 44583 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding Merged-chr1-26035482-1 chr1 26035382 26035582 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_004455, exon 11 of 11) 3' UTR (NM_004455, exon 11 of 11) 10656 NM_001004434 7780 Hs.143545 NM_032513 ENSG00000158014 SLC30A2 PP12488|TNZD|ZNT2|ZnT-2 solute carrier family 30 member 2 protein-coding Merged-chr9-134443538-1 chr9 134443438 134443638 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 36956 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding Merged-chr1-16613589-1 chr1 16613489 16613689 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017940) promoter-TSS (NM_017940) 16 NM_017940 55672 Hs.467587 NM_017940 ENSG00000219481 NBPF1 AB13|AB14|AB23|AD2|NBG|NBPF neuroblastoma breakpoint family member 1 protein-coding Merged-chr10-63700297-1 chr10 63700197 63700397 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -178222 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding Merged-chr12-32679216-1 chr12 32679116 32679316 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278463) promoter-TSS (NM_001278463) 16 NM_001278466 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV dynamin 1 like protein-coding Merged-chr17-45171101-1 chr17 45171001 45171201 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_135646, exon 1 of 2) non-coding (NR_135646, exon 1 of 2) 384 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 -0 uncharacterized LOC105371795 ncRNA Merged-chr8-81026571-1 chr8 81026471 81026671 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018440, intron 3 of 8) intron (NM_018440, intron 3 of 8) 85497 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding Merged-chr1-172306741-1 chr1 172306641 172306841 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015569, intron 15 of 20) L1PA6|LINE|L1 -113947 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 -0 chromosome 1 open reading frame 105 protein-coding Merged-chr11-66638479-1 chr11 66638379 66638579 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002896) promoter-TSS (NM_002896) -138 NM_001198843 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding Merged-chr1-40373596-1 chr1 40373496 40373696 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022733) promoter-TSS (NM_022733) -110 NM_022733 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding Merged-chr6-43014029-1 chr6 43013929 43014129 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014623) promoter-TSS (NM_014623) -46 NM_001318942 4201 Hs.278362 NM_014623 ENSG00000124733 MEA1 HYS|MEA male-enhanced antigen 1 protein-coding Merged-chr11-70482341-1 chr11 70482241 70482441 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110766, intron 8 of 8) intron (NR_110766, intron 8 of 8) 83835 NM_138565 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding Merged-chr20-49219308-1 chr20 49219208 49219408 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319135) promoter-TSS (NM_001319135) -13 NM_001319135 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding Merged-chr12-56725504-1 chr12 56725404 56725604 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001113203) promoter-TSS (NM_001113203) 38 NM_001113202 4666 Hs.505735 NM_005594 ENSG00000196531 NACA HSD48|NAC-alpha|NACA1|skNAC nascent polypeptide-associated complex alpha subunit protein-coding Merged-chrX-15565323-1 chrX 15565223 15565423 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021804, intron 17 of 18) intron (NM_021804, intron 17 of 18) 36746 NM_021804 59272 Hs.178098 NM_021804 ENSG00000130234 ACE2 ACEH angiotensin I converting enzyme 2 protein-coding Merged-chr14-77616787-1 chr14 77616687 77616887 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004863) promoter-TSS (NM_004863) -20 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding Merged-chr19-44753511-1 chr19 44753411 44753611 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005178, intron 2 of 8) intron (NM_005178, intron 2 of 8) 4790 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 B-cell CLL/lymphoma 3 protein-coding Merged-chr10-124212123-1 chr10 124212023 124212223 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1A|LTR|ERVL-MaLR -118516 NM_001270765 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding Merged-chr8-93754858-1 chr8 93754758 93754958 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024522) promoter-TSS (NR_024522) 14 NM_001142301 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding Merged-chr6-73580488-1 chr6 73580388 73580588 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -59456 NM_001402 1915 Hs.535192 NM_001402 ENSG00000156508 EEF1A1 CCS-3|CCS3|EE1A1|EEF-1|EEF1A|EF-Tu|EF1A|GRAF-1EF|HNGC:16303|LENG7|PTI1|eEF1A-1 eukaryotic translation elongation factor 1 alpha 1 protein-coding Merged-chr1-214387040-1 chr1 214386940 214387140 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005401, intron 11 of 18) intron (NM_005401, intron 11 of 18) 105818 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding Merged-chr1-1116152-1 chr1 1116052 1116252 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_017891, exon 1 of 10) 5' UTR (NM_017891, exon 1 of 10) 204 NM_017891 54991 Hs.235095 NM_017891 ENSG00000131591 C1orf159 -0 chromosome 1 open reading frame 159 protein-coding Merged-chr17-79074704-1 chr17 79074604 79074804 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042573) promoter-TSS (NM_001042573) -233 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE -0 endo-beta-N-acetylglucosaminidase protein-coding Merged-chrX-2615075-1 chrX 2614975 2615175 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_037842, exon 1 of 2) non-coding (NR_037842, exon 1 of 2) 272 NR_037842 100359394 Hs.571720 NR_037842 ENSG00000230542 LINC00102 NCRNA00102 long intergenic non-protein coding RNA 102 ncRNA Merged-chr17-17972880-1 chr17 17972780 17972980 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033551) promoter-TSS (NM_001033551) 67 NM_001130092 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding Merged-chr17_GL000205v2_random-1318-1 chr17_GL000205v2_random 1218 1418 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CER|Satellite|Satellite 56648 NR_003682 403340 Hs.572501 NR_003682 MGC70870 -0 C-terminal binding protein 2 pseudogene pseudo Merged-chr7-17095080-1 chr7 17094980 17095180 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -203572 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR bHLHe76 aryl hydrocarbon receptor protein-coding Merged-chr19-49813655-1 chr19 49813555 49813755 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_033269) promoter-TSS (NR_033269) -345 NM_001171937 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ FY|NTD fuzzy planar cell polarity protein protein-coding Merged-chr20-45779604-1 chr20 45779504 45779704 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_080614, intron 4 of 6) intron (NM_080614, intron 4 of 6) 12304 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding Merged-chr5-157731732-1 chr5 157731632 157731832 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317826) promoter-TSS (NM_001317826) -81 NM_001317826 54974 Hs.353090 NM_017872 ENSG00000113272 THG1L ICF45|IHG-1|hTHG1 tRNA-histidine guanylyltransferase 1 like protein-coding Merged-chr20-34112320-1 chr20 34112220 34112420 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003908) promoter-TSS (NM_003908) 36 NM_003908 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding Merged-chr10-29784548-1 chr10 29784448 29784648 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -47547 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL -0 supervillin protein-coding Merged-chr15-75661231-1 chr15 75661131 75661331 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 12224 NM_001318146 257364 Hs.8705 NM_153271 ENSG00000173548 SNX33 SH3PX3|SH3PXD3C|SNX30 sorting nexin 33 protein-coding Merged-chr2-85505100-1 chr2 85505000 85505200 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 33786 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA Merged-chr2-99336441-2 chr2 99336280 99336602 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_005783) promoter-TSS (NM_005783) -44 NM_005783 10190 Hs.536122 NM_005783 ENSG00000115514 TXNDC9 APACD|PHLP3 thioredoxin domain containing 9 protein-coding Merged-chr19-54159840-1 chr19 54159740 54159940 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024316).7 promoter-TSS (NM_024316).7 -97 NM_024316 79165 Hs.590974 NM_024316 ENSG00000105617 LENG1 -0 leukocyte receptor cluster member 1 protein-coding Merged-chr6-134436370-1 chr6 134436270 134436470 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125852, intron 4 of 4) intron (NR_125852, intron 4 of 4) -1346 NR_038216 154092 Hs.223718 NR_038216 LINC01010 -0 long intergenic non-protein coding RNA 1010 ncRNA Merged-chr10-110918584-1 chr10 110918484 110918684 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001269039) promoter-TSS (NM_001269039) 352 NM_001195306 92482 Hs.232543 NM_001195304 ENSG00000214413 BBIP1 BBIP10|BBS18|NCRNA00081|bA348N5.3 BBSome interacting protein 1 protein-coding Merged-chr9-92115532-1 chr9 92115432 92115632 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178324) promoter-TSS (NM_178324) -58 NM_006415 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding Merged-chr16-22199823-1 chr16 22199723 22199923 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6448 NM_013302 29904 Hs.498892 NM_013302 ENSG00000103319 EEF2K HSU93850|eEF-2K eukaryotic elongation factor 2 kinase protein-coding Merged-chr19-18007167-1 chr19 18007067 18007267 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001025604, intron 1 of 7) CpG -1001 NM_015683 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding Merged-chr16-57810422-1 chr16 57810322 57810522 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278081) promoter-TSS (NM_001278081) -215 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 -0 uncharacterized LOC388282 protein-coding Merged-chr11-3057492-1 chr11 3057392 3057592 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001751) promoter-TSS (NM_001751) -41 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding Merged-chr16-87950997-1 chr16 87950897 87951097 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001173541) promoter-TSS (NM_001173541) -435 NM_001173540 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding Merged-chr12-77925673-1 chr12 77925573 77925773 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014903, intron 1 of 38) intron (NM_014903, intron 1 of 38) 94384 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding Merged-chr5-62403938-1 chr5 62403838 62404038 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014473) promoter-TSS (NM_014473) -37 NM_014473 27292 Hs.731665 NM_014473 ENSG00000086189 DIMT1 DIM1|DIMT1L|HSA9761|HUSSY5 DIM1 dimethyladenosine transferase 1 homolog protein-coding Merged-chr1-235018356-1 chr1 235018256 235018456 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1G|LTR|ERVL-MaLR 51462 NR_027454 731656 Hs.702477 NR_027454 LINC01348 -0 long intergenic non-protein coding RNA 1348 ncRNA Merged-chr4-76301549-1 chr4 76301449 76301649 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001242939, intron 6 of 6) intron (NM_001242939, intron 6 of 6) -4477 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding Merged-chr22-37304094-1 chr22 37303994 37304194 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318024, intron 8 of 12) L2c|LINE|L2 21711 NM_001318024 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding Merged-chr20-46122128-1 chr20 46122028 46122228 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152854, intron 2 of 7) intron (NM_152854, intron 2 of 7) 3874 NM_001322422 958 Hs.472860 NM_001250 ENSG00000101017 CD40 Bp50|CDW40|TNFRSF5|p50 CD40 molecule protein-coding Merged-chr19-17080232-1 chr19 17080132 17080332 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001130065, intron 1 of 39) intron (NM_001130065, intron 1 of 39) 4451 NM_004145 4650 Hs.123198 NM_004145 ENSG00000099331 MYO9B CELIAC4|MYR5 myosin IXB protein-coding Merged-chr7-74610530-1 chr7 74610430 74610630 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR -47135 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding Merged-chr15-92567530-1 chr15 92567430 92567630 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_021493) TTS (NR_021493) 4733 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 -0 long intergenic non-protein coding RNA 930 ncRNA Merged-chr17-50867564-1 chr17 50867464 50867664 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_038458, exon 2 of 2) non-coding (NR_038458, exon 2 of 2) 414 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding Merged-chr2-207166260-1 chr2 207166160 207166360 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003709) promoter-TSS (NM_003709) -74 NR_073108 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding Merged-chr3-133573389-1 chr3 133573289 133573489 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001134422) promoter-TSS (NM_001134422) -201 NM_001134422 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding Merged-chr8-144827444-1 chr8 144827344 144827544 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330623) promoter-TSS (NM_001330623) -74 NM_001282796 7553 Hs.493218 NM_003416 ENSG00000147789 ZNF7 HF.16|KOX4|zf30 zinc finger protein 7 protein-coding Merged-chr19-5978267-1 chr19 5978167 5978367 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300865) promoter-TSS (NM_001300865) 42 NM_001300865 8498 Hs.531752 NM_003624 ENSG00000031823 RANBP3 -0 RAN binding protein 3 protein-coding Merged-chr4-16140970-1 chr4 16140870 16141070 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -56970 NM_001145848 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding Merged-chr7-16668175-1 chr7 16668075 16668275 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_027624, intron 2 of 10) intron (NR_027624, intron 2 of 10) 22041 NM_001159767 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding Merged-chr9-86127566-1 chr9 86127466 86127666 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110996) promoter-TSS (NR_110996) 26 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 -0 uncharacterized LOC101927623 ncRNA Merged-chr17-3636382-1 chr17 3636282 3636482 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013276) promoter-TSS (NM_013276) -60 NM_013276 23729 Hs.579217 NM_013276 ENSG00000197417 SHPK CARKL|SHK sedoheptulokinase protein-coding Merged-chr16-55500218-1 chr16 55500118 55500318 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001127891, intron 11 of 12) intron (NM_001127891, intron 11 of 12) -8783 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding Merged-chr17-41062149-1 chr17 41062049 41062249 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001277332, intron 5 of 5) LTR65|LTR|ERV1 -2057 NM_001165252 730755 Hs.406714 NM_001165252 ENSG00000212724 KRTAP2-3 KAP2.3|KRTAP2.3 keratin associated protein 2-3 protein-coding Merged-chr11-64810588-1 chr11 64810488 64810688 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_130801) promoter-TSS (NM_130801) -25 NM_130801 4221 Hs.423348 NM_000244 ENSG00000133895 MEN1 MEAI|SCG2 menin 1 protein-coding Merged-chr12-124916477-1 chr12 124916377 124916577 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_049820) TTS (NR_049820) 930 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA Merged-chrX-1392227-1 chrX 1392127 1392327 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001636).2 promoter-TSS (NM_001636).2 -81 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding Merged-chr19-18204083-1 chr19 18203983 18204183 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134910) promoter-TSS (NR_134910) -19 NM_002866 5864 Hs.27744 NM_002866 ENSG00000105649 RAB3A -0 RAB3A, member RAS oncogene family protein-coding Merged-chr7-73522376-1 chr7 73522276 73522476 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032408) promoter-TSS (NM_032408) -91 NM_032408 9031 Hs.743372 NM_023005 ENSG00000009954 BAZ1B WBSCR10|WBSCR9|WSTF bromodomain adjacent to zinc finger domain 1B protein-coding Merged-chr19-13862383-1 chr19 13862283 13862483 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -12316 NR_029613 406957 NR_029613 ENSG00000207613 MIR181C MIRN181C|mir-181c microRNA 181c ncRNA Merged-chr10-43455818-1 chr10 43455718 43455918 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026693, intron 1 of 3) CpG 18692 NR_026693 642819 Hs.719657 NR_026693 ZNF487 KRBO1|ZNF487P zinc finger protein 487 pseudo Merged-chr17-78251129-1 chr17 78251029 78251229 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 19819 NM_001204212 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding Merged-chr11-72434590-1 chr11 72434490 72434690 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001258392) promoter-TSS (NM_001258392) 94 NM_001258393 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding Merged-chr8-102754373-1 chr8 102754273 102754473 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -98471 NM_005655 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding Merged-chr1-44327996-1 chr1 44327896 44328096 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301701, intron 2 of 7) intron (NM_001301701, intron 2 of 7) 27283 NM_001301698 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding Merged-chr21-45875211-1 chr21 45875111 45875311 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020528, intron 1 of 13) intron (NM_020528, intron 1 of 13) 25250 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3 poly(rC) binding protein 3 protein-coding Merged-chr11-12138576-1 chr11 12138476 12138676 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_144419, intron 2 of 27) intron (NR_144419, intron 2 of 27) 186 NM_001282664 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding Merged-chr4-24176892-1 chr4 24176792 24176992 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330751, intron 2 of 14) intron (NM_001330751, intron 2 of 14) -286815 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding Merged-chr2-71227348-1 chr2 71227248 71227448 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020459) promoter-TSS (NM_020459) -245 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B -0 poly(A) binding protein interacting protein 2B protein-coding Merged-chr15-97960384-1 chr15 97960284 97960484 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_183376) promoter-TSS (NM_183376) -319 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 -0 arrestin domain containing 4 protein-coding Merged-chr4-121711703-1 chr4 121711603 121711803 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14711 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding Merged-chr6-87723451-1 chr6 87723351 87723551 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -21184 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding Merged-chr14-69767071-1 chr14 69766971 69767171 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006925) promoter-TSS (NM_006925) -16 NM_006925 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding Merged-chr18-61569254-1 chr18 61569154 61569354 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -178922 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 -0 long intergenic non-protein coding RNA 1544 ncRNA Merged-chr3-150603271-1 chr3 150603171 150603371 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016275) promoter-TSS (NM_016275) -8 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding Merged-chr6-33271984-1 chr6 33271884 33272084 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001289175).4 promoter-TSS (NM_001289175).4 -19 NM_022553 6293 Hs.480356 NM_022553 ENSG00000223501 VPS52 ARE1|SAC2|SACM2L|dJ1033B10.5 VPS52, GARP complex subunit protein-coding Merged-chr12-6852490-1 chr12 6852390 6852590 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001331019) promoter-TSS (NM_001331019) 363 NM_003481 8078 Hs.631661 NM_003481 ENSG00000111667 USP5 ISOT ubiquitin specific peptidase 5 protein-coding Merged-chr17-78324737-1 chr17 78324637 78324837 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 35342 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding Merged-chr4-56977650-1 chr4 56977550 56977750 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032313) promoter-TSS (NM_032313) 10 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding Merged-chr6-75206013-1 chr6 75205913 75206113 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_080645) promoter-TSS (NM_080645) -106 NM_004370 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|UCMD2 collagen type XII alpha 1 chain protein-coding Merged-chr22-21962085-1 chr22 21961985 21962185 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003935, intron 13 of 17) intron (NM_003935, intron 13 of 17) -9207 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding Merged-chr2-172693260-1 chr2 172693160 172693360 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -42537 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding Merged-chr2-208266062-1 chr2 208265962 208266162 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001178000) promoter-TSS (NM_001178000) -205 NM_152671 200576 Hs.744997 NM_015040 ENSG00000115020 PIKFYVE CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29 phosphoinositide kinase, FYVE-type zinc finger containing protein-coding Merged-chr2-26345924-1 chr2 26345824 26346024 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_033505) promoter-TSS (NM_033505) -82 NM_001321975 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding Merged-chr17-42833337-1 chr17 42833237 42833437 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330229) promoter-TSS (NM_001330229) -60 NM_001330229 10197 Hs.152978 NM_005789 ENSG00000131467 PSME3 HEL-S-283|Ki|PA28-gamma|PA28G|PA28gamma|REG-GAMMA proteasome activator subunit 3 protein-coding Merged-chr19-40615089-1 chr19 40614989 40615189 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001042544, intron 22 of 32) intron (NM_001042544, intron 22 of 32) 13718 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding Merged-chr2-135741698-1 chr2 135741598 135741798 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014607) promoter-TSS (NM_014607) 79 NM_014607 23190 Hs.591242 NM_014607 ENSG00000144224 UBXN4 UBXD2|UBXDC1|erasin UBX domain protein 4 protein-coding Merged-chr5-43483817-1 chr5 43483717 43483917 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022483) promoter-TSS (NM_022483) 73 NM_022483 64417 Hs.732093 NM_022483 ENSG00000151881 TMEM267 C5orf28 transmembrane protein 267 protein-coding Merged-chr19-12610822-1 chr19 12610722 12610922 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153358) promoter-TSS (NM_153358) -13 NM_020714 57474 Hs.655860 NM_020714 ENSG00000188033 ZNF490 -0 zinc finger protein 490 protein-coding Merged-chr5-132294269-1 chr5 132294169 132294369 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003059) promoter-TSS (NM_003059) -183 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding Merged-chr2-43269212-1 chr2 43269112 43269312 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_144316, intron 35 of 36) intron (NR_144316, intron 35 of 36) 42001 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 -0 long intergenic non-protein coding RNA 1126 ncRNA Merged-chr1-174999681-1 chr1 174999581 174999781 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014412) promoter-TSS (NM_014412) -75 NM_014412 27101 Hs.508524 NM_014412 ENSG00000116161 CACYBP GIG5|PNAS-107|S100A6BP|SIP calcyclin binding protein protein-coding Merged-chr1-26693121-1 chr1 26693021 26693221 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_135804, exon 1 of 1) non-coding (NR_135804, exon 1 of 1) 1010 NR_135804 101928728 Hs.128770 NR_135804 ENSG00000260063 LOC101928728 -0 uncharacterized LOC101928728 ncRNA Merged-chr2-74178978-1 chr2 74178878 74179078 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317111) promoter-TSS (NM_001317111) -11 NM_001317110 55233 Hs.602092 NM_018221 ENSG00000114978 MOB1A C2orf6|MATS1|MOB1|MOBK1B|MOBKL1B|Mob4B MOB kinase activator 1A protein-coding Merged-chr3-197394840-1 chr3 197394740 197394940 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -95568 NM_001290983 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|dJ1061C18.1.1|hdlg discs large MAGUK scaffold protein 1 protein-coding Merged-chr2-227818427-1 chr2 227818327 227818527 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001130046) TTS (NM_001130046) 4585 NM_001130046 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding Merged-chr6-169070774-1 chr6 169070674 169070874 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 2988 NR_134619 102724357 Hs.129310 NR_134619 ENSG00000234519 LOC102724357 -0 uncharacterized LOC102724357 ncRNA Merged-chr19-58387197-1 chr19 58387097 58387297 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001009) promoter-TSS (NM_001009) -72 NM_001009 6193 Hs.378103 NM_001009 ENSG00000083845 RPS5 S5 ribosomal protein S5 protein-coding Merged-chr1-107076913-1 chr1 107076813 107077013 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1H|LTR|ERVL-MaLR 20268 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding Merged-chr6-35259570-1 chr6 35259470 35259670 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001292032) promoter-TSS (NM_001292032) -144 NM_003427 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding Merged-chr12-68332393-1 chr12 68332293 68332493 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001205028) promoter-TSS (NM_001205028) -12 NM_020128 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 -0 Mdm1 nuclear protein protein-coding Merged-chr4-176270811-1 chr4 176270711 176270911 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1589 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding Merged-chr22-29799463-1 chr22 29799363 29799563 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001242906, intron 14 of 18) intron (NM_001242906, intron 14 of 18) 32094 NM_001003684 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding Merged-chr10-93458943-1 chr10 93458843 93459043 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_133337, intron 1 of 52) intron (NM_133337, intron 1 of 52) 23374 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding Merged-chr15-34101949-1 chr15 34101849 34102049 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020154) promoter-TSS (NM_020154) -97 NM_020154 56851 Hs.160565 NM_020154 ENSG00000134153 EMC7 C11orf3|C15orf24|HT022|ORF1-FL1 ER membrane protein complex subunit 7 protein-coding Merged-chrX-13669453-1 chrX 13669353 13669553 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 16262 NM_152634 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC -0 transcription elongation factor A N-terminal and central domain containing protein-coding Merged-chr2-237500969-1 chr2 237500869 237501069 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001281474, intron 3 of 13) L2b|LINE|L2 -9962 NR_106869 102465486 NR_106869 ENSG00000277842 MIR6811 hsa-mir-6811 microRNA 6811 ncRNA Merged-chr5-61301970-1 chr5 61301870 61302070 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -30303 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND zinc finger SWIM-type containing 6 protein-coding Merged-chr10-30736986-1 chr10 30736886 30737086 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1P3|LINE|L1 13767 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LOC105376480 -0 uncharacterized LOC105376480 ncRNA Merged-chr17-63461042-1 chr17 63460942 63461142 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14681 NM_001915 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding Merged-chr12-3728397-1 chr12 3728297 3728497 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032680, intron 2 of 10) intron (NM_032680, intron 2 of 10) 24803 NM_001144958 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding Merged-chr1-62436541-1 chr1 62436441 62436641 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003368) promoter-TSS (NM_003368) -171 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding Merged-chr19-15266057-1 chr19 15265957 15266157 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330384, intron 4 of 11) intron (NM_001330384, intron 4 of 11) 14394 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding Merged-chr17-82241687-1 chr17 82241587 82241787 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_110578) TTS (NR_110578) 5019 NR_106845 102465472 NR_106845 ENSG00000141526 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA Merged-chr1-113812492-1 chr1 113812392 113812592 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018364) promoter-TSS (NM_018364) -16 NM_018364 54665 Hs.486285 NM_018364 ENSG00000081019 RSBN1 ROSBIN round spermatid basic protein 1 protein-coding Merged-chr7-26200800-1 chr7 26200700 26200900 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031243) promoter-TSS (NM_031243) -7 NM_002137 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding Merged-chr1-11262765-1 chr1 11262665 11262865 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004958) promoter-TSS (NM_004958) -214 NM_004958 2475 Hs.338207 NM_004958 ENSG00000198793 MTOR FRAP|FRAP1|FRAP2|RAFT1|RAPT1|SKS mechanistic target of rapamycin protein-coding Merged-chr12-122947052-1 chr12 122946952 122947152 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001243013, intron 5 of 10) intron (NM_001243013, intron 5 of 10) 19457 NM_203444 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding Merged-chr2-159202914-1 chr2 159202814 159203014 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033394, intron 19 of 26) intron (NM_033394, intron 19 of 26) 16079 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA Merged-chr17-42964462-1 chr17 42964362 42964562 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001261434) promoter-TSS (NM_001261434) 36 NM_001261434 80755 Hs.317403 NM_001261434 ENSG00000266967 AARSD1 -0 alanyl-tRNA synthetase domain containing 1 protein-coding Merged-chr20-57714650-1 chr20 57714550 57714750 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -3114 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding Merged-chr17-79038688-1 chr17 79038588 79038788 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_198593, intron 1 of 3) MARNA|DNA|TcMar-Mariner 4389 NM_198593 114897 Hs.201398 NM_030968 ENSG00000173918 C1QTNF1 CTRP1|GIP|ZSIG37 C1q and tumor necrosis factor related protein 1 protein-coding Merged-chr1-45303610-1 chr1 45303510 45303710 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024270) promoter-TSS (NR_024270) -300 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 -0 long intergenic non-protein coding RNA 1144 ncRNA Merged-chr12-2004499-1 chr12 2004399 2004599 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135060) promoter-TSS (NR_135060) 36 NM_001319292 196513 Hs.130934 NM_152640 ENSG00000151065 DCP1B DCP1 decapping mRNA 1B protein-coding Merged-chr1-22451921-1 chr1 22451821 22452021 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014870) promoter-TSS (NM_014870) 70 NM_001083621 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding Merged-chr11-64917361-1 chr11 64917261 64917461 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015104) promoter-TSS (NM_015104) -111 NM_015104 23130 Hs.370671 NM_015104 ENSG00000110046 ATG2A -0 autophagy related 2A protein-coding Merged-chr9-136790923-1 chr9 136790823 136791023 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032928) promoter-TSS (NM_032928) -402 NM_032928 85014 Hs.356744 NM_032928 ENSG00000244187 TMEM141 -0 transmembrane protein 141 protein-coding Merged-chr10-122063430-1 chr10 122063330 122063530 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_206861, intron 3 of 19) intron (NM_206861, intron 3 of 19) -49609 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding Merged-chr12-53676140-1 chr12 53676040 53676240 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330269) promoter-TSS (NM_001330269) 185 NM_005176 517 Hs.524464 NM_005176 ENSG00000135390 ATP5G2 ATP5A ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9) protein-coding Merged-chr6-30687320-1 chr6 30687220 30687420 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001134870).4 promoter-TSS (NM_001134870).4 -4 NM_001134870 170954 Hs.101150 NM_133471 ENSG00000146112 PPP1R18 HKMT1098|KIAA1949 protein phosphatase 1 regulatory subunit 18 protein-coding Merged-chr19-49641913-1 chr19 49641813 49642013 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021228) promoter-TSS (NM_021228) -212 NM_021228 58506 Hs.103521 NM_021228 ENSG00000126461 SCAF1 SRA1 SR-related CTD associated factor 1 protein-coding Merged-chr1-25239803-1 chr1 25239703 25239903 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7281 NM_207170 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding Merged-chr19-44113229-1 chr19 44113129 44113329 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_033341) promoter-TSS (NR_033341) -46 NR_033341 100379224 Hs.585869 NR_033341 ENSG00000186019 LOC100379224 -0 uncharacterized LOC100379224 ncRNA Merged-chr6-135054854-1 chr6 135054754 135054954 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145158) promoter-TSS (NM_001145158) 44 NM_001145158 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding Merged-chr12-12820186-1 chr12 12820086 12820286 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_201224, intron 2 of 10) intron (NM_201224, intron 2 of 10) 6840 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding Merged-chr18-76709939-1 chr18 76709839 76710039 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 19910 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 -0 long intergenic non-protein coding RNA 1879 ncRNA Merged-chr15-75454066-1 chr15 75453966 75454166 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145357, intron 1 of 20) CpG-8441 1717 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding Merged-chr17-42520341-1 chr17 42520241 42520441 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001130021, intron 21 of 21) intron (NM_001130021, intron 21 of 21) 6153 NR_049808 100847046 NR_049808 ENSG00000033627 MIR5010 mir-5010 microRNA 5010 ncRNA Merged-chr17-5526922-1 chr17 5526822 5527022 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033007, intron 11 of 14) intron (NM_033007, intron 11 of 14) -25923 NM_001162371 728392 Hs.104305 NM_001162371 LOC728392 -0 uncharacterized LOC728392 protein-coding Merged-chr1-3796559-1 chr1 3796459 3796659 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020710) promoter-TSS (NM_020710) -55 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 -0 leucine rich repeat containing 47 protein-coding Merged-chr4-15681681-1 chr4 15681581 15681781 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145191) promoter-TSS (NM_001145191) -48 NM_001145191 285550 Hs.399980 NM_001145191 ENSG00000237765 FAM200B -0 family with sequence similarity 200 member B protein-coding Merged-chr16-2155423-1 chr16 2155323 2155523 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_132114) promoter-TSS (NR_132114) -65 NR_132114 100507303 Hs.369728 NR_132114 ENSG00000260260 SNHG19 SNORD60HG small nucleolar RNA host gene 19 ncRNA Merged-chr4-158810936-1 chr4 158810836 158811036 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001323916, intron 1 of 16) intron (NM_001323916, intron 1 of 16) 4842 NM_001323916 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding Merged-chr17-78187215-1 chr17 78187115 78187315 0 5.470000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003258) promoter-TSS (NM_003258) -11 NM_001346663 7083 Hs.515122 NM_003258 ENSG00000167900 TK1 TK2 thymidine kinase 1 protein-coding Merged-chr6-33391465-2 chr6 33391332 33391599 0 5.460000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002263).2 promoter-TSS (NM_002263).2 -71 NM_002263 3833 Hs.436912 NM_002263 ENSG00000237649 KIFC1 HSET|KNSL2 kinesin family member C1 protein-coding Merged-chr17-40287755-2 chr17 40287629 40287881 0 5.460000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001254) promoter-TSS (NM_001254) -139 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding Merged-chr11-65122214-2 chr11 65122081 65122348 0 5.460000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004927) promoter-TSS (NM_004927) -14 NM_001997 2197 Hs.387208 NM_001997 ENSG00000149806 FAU FAU1|Fub1|Fubi|MNSFbeta|RPS30|S30|asr1 FAU, ubiquitin like and ribosomal protein S30 fusion protein-coding Merged-chr3-150546679-2 chr3 150546521 150546837 0 5.460000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001319043) promoter-TSS (NM_001319043) 1 NM_001319045 83939 Hs.655782 NM_032025 ENSG00000144895 EIF2A CDA02|EIF-2A|MST089|MSTP004|MSTP089 eukaryotic translation initiation factor 2A protein-coding Merged-chr17-40314733-2 chr17 40314617 40314849 0 5.460000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000964, intron 1 of 8) intron (NM_000964, intron 1 of 8) -3488 NM_001145302 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding Merged-chr21-14383286-2 chr21 14383132 14383441 0 5.450000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006948) promoter-TSS (NM_006948) -98 NM_006948 6782 Hs.352341 NM_006948 ENSG00000155304 HSPA13 STCH heat shock protein family A (Hsp70) member 13 protein-coding Merged-chr1-9719222-2 chr1 9719117 9719327 0 5.450000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005026, intron 9 of 23) intron (NM_005026, intron 9 of 23) -31648 NR_126368 101929074 Hs.661762 NR_126366 ENSG00000231789 PIK3CD-AS2 -0 PIK3CD antisense RNA 2 ncRNA Merged-chr11-43680600-2 chr11 43680449 43680751 0 5.450000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_016142) promoter-TSS (NM_016142) 7 NM_016142 51144 Hs.132513 NM_016142 ENSG00000149084 HSD17B12 KAR|SDR12C1 hydroxysteroid 17-beta dehydrogenase 12 protein-coding Merged-chr1-221840036-2 chr1 221839881 221840191 0 5.440000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_125989, intron 2 of 3) intron (NR_125989, intron 2 of 3) 630 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 -0 long intergenic non-protein coding RNA 1655 ncRNA Merged-chr3-105366679-2 chr3 105366558 105366801 0 5.440000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001627) promoter-TSS (NM_001627) -34 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding Merged-chr1-7961542-2 chr1 7961414 7961671 0 5.440000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001123377) promoter-TSS (NM_001123377) -112 NM_007262 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|HEL-S-67p Parkinsonism associated deglycase protein-coding Merged-chr14-100693314-2 chr14 100693196 100693432 0 5.350000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 -33551 NM_003836 8788 Hs.116631 NM_003836 ENSG00000185559 DLK1 DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2 delta like non-canonical Notch ligand 1 protein-coding Merged-chr5-95858951-2 chr5 95858807 95859095 0 5.340000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_026936, exon 3 of 3) non-coding (NR_026936, exon 3 of 3) 6719 NR_026936 202299 Hs.8373 NM_175616 ENSG00000236882 LINC01554 C5orf27|FIS long intergenic non-protein coding RNA 1554 ncRNA Merged-chr17-58518741-2 chr17 58518566 58518916 0 5.340000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004687) promoter-TSS (NM_004687) -851 NM_004687 9110 Hs.514373 NM_004687 ENSG00000108389 MTMR4 FYVE-DSP2|ZFYVE11 myotubularin related protein 4 protein-coding Merged-chr11-66971013-2 chr11 66970900 66971127 0 5.325000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4270 NM_001136485 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 -0 chromosome 11 open reading frame 86 protein-coding Merged-chr1-24266605-2 chr1 24266445 24266765 0 5.325000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -52717 NM_198173 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding Merged-chr17-50200239-2 chr17 50200113 50200365 0 5.325000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000088, intron 1 of 50) CpG-11414 1400 NM_000088 1277 Hs.172928 NM_000088 ENSG00000108821 COL1A1 EDSC|OI1|OI2|OI3|OI4 collagen type I alpha 1 chain protein-coding Merged-chr19-15419165-2 chr19 15419041 15419290 0 5.320000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001291478) promoter-TSS (NM_001291478) -44 NM_001291478 26993 Hs.399800 NM_014371 ENSG00000011243 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A-kinase anchoring protein 8 like protein-coding Merged-chr8-42843386-2 chr8 42843276 42843497 0 5.320000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_018105) promoter-TSS (NM_018105) -55 NM_199003 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding Merged-chr17-17512064-2 chr17 17511937 17512191 0 5.320000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_148172, intron 4 of 6) intron (NM_148172, intron 4 of 6) -15669 NM_001199989 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding Merged-chr1-23528381-2 chr1 23528276 23528487 0 5.310000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NR_110799) TTS (NR_110799) 2839 NM_004091 1870 Hs.194333 NM_004091 ENSG00000007968 E2F2 E2F-2 E2F transcription factor 2 protein-coding Merged-chr20-18507845-2 chr20 18507745 18507946 0 5.310000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001172745) promoter-TSS (NM_001172745) -118 NM_001172745 10483 Hs.369373 NM_006363 ENSG00000101310 SEC23B CDA-II|CDAII|CDAN2|CWS7|HEMPAS Sec23 homolog B, coat complex II component protein-coding Merged-chr17-81394129-2 chr17 81393989 81394269 0 5.310000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -5592 NM_001291324 57597 Hs.514580 NM_024696 ENSG00000266074 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding Merged-chr5-33370260-2 chr5 33370092 33370428 0 5.310000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -70436 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding Merged-chr1-10398854-2 chr1 10398704 10399005 0 5.310000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001304451) promoter-TSS (NM_001304451) -138 NM_002631 5226 Hs.464071 NM_002631 ENSG00000142657 PGD 6PGD phosphogluconate dehydrogenase protein-coding Merged-chr17-45197979-2 chr17 45197869 45198089 0 5.190000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -23946 NM_005892 752 Hs.100217 NM_005892 ENSG00000184922 FMNL1 C17orf1|C17orf1B|FHOD4|FMNL|KW-13 formin like 1 protein-coding Merged-chr3-139389690-2 chr3 139389578 139389802 0 5.175000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004766) promoter-TSS (NM_004766) -10 NR_023350 9276 Hs.681616 NM_004766 ENSG00000184432 COPB2 beta'-COP coatomer protein complex subunit beta 2 protein-coding Merged-chr4-28392753-1 chr4 28392653 28392853 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2b|LINE|L2 -426829 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 -0 microRNA 4275 ncRNA Merged-chr4-72312252-1 chr4 72312152 72312352 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014243, intron 13 of 21) intron (NM_014243, intron 13 of 21) 256547 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding Merged-chr3-184334628-1 chr3 184334528 184334728 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_004953, intron 25 of 25) intron (NM_004953, intron 25 of 25) -1301 NM_001171093 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding Merged-chr7-73822710-1 chr7 73822610 73822810 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -8153 NM_001305 1364 Hs.647036 NM_001305 ENSG00000189143 CLDN4 CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R claudin 4 protein-coding Merged-chr17-18026661-1 chr17 18026561 18026761 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_145691, intron 3 of 7) intron (NM_145691, intron 3 of 7) 12505 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding Merged-chr16-66478877-1 chr16 66478777 66478977 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001197225, intron 3 of 4) intron (NM_001197225, intron 3 of 4) -2475 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA Merged-chr17-50290199-1 chr17 50290099 50290299 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -2344 NR_125805 103752589 Hs.612913 NR_125805 ENSG00000251179 TMEM92-AS1 TCONS_00025237|lncRNA-508851 TMEM92 antisense RNA 1 ncRNA Merged-chr10-8501881-1 chr10 8501781 8501981 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 92510 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr20-44885564-1 chr20 44885464 44885664 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003404) promoter-TSS (NM_003404) -35 NM_139323 7529 Hs.643544 NM_003404 ENSG00000166913 YWHAB GW128|HEL-S-1|HS1|KCIP-1|YWHAA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta protein-coding Merged-chr6-88963748-1 chr6 88963648 88963848 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003800) promoter-TSS (NM_003800) -119 NM_001286428 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding Merged-chr8-127734218-1 chr8 127734118 127734318 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_117102) promoter-TSS (NR_117102) -251 NR_117101 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility candidate 11 (non-protein coding) ncRNA Merged-chr6-125946491-1 chr6 125946391 125946591 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L2|LINE|L2 -10224 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding Merged-chr17-75154598-1 chr17 75154498 75154698 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001288609) promoter-TSS (NM_001288609) 85 NM_016185 51155 Hs.532803 NM_016185 ENSG00000189159 HN1 ARM2|HN1A hematological and neurological expressed 1 protein-coding Merged-chr9-126791573-1 chr9 126791473 126791673 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13433 NM_014007 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding Merged-chr5-172740975-1 chr5 172740875 172741075 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -14528 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 -0 uncharacterized LOC101928093 protein-coding Merged-chr10-8537832-1 chr10 8537732 8537932 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 56559 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr10-8591691-1 chr10 8591591 8591791 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_134492, intron 1 of 1) intron (NR_134492, intron 1 of 1) 2700 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chrX-12013481-1 chrX 12013381 12013581 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -124985 NM_014728 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding Merged-chr6-125812471-1 chr6 125812371 125812571 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_126386, intron 1 of 2) intron (NR_126386, intron 1 of 2) 6387 NR_126386 104355145 Hs.590370 NR_126386 ENSG00000232131 NCOA7-AS1 -0 NCOA7 antisense RNA 1 ncRNA Merged-chr3-125063296-1 chr3 125063196 125063396 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -7338 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding Merged-chr1-172152452-1 chr1 172152352 172152552 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015569, intron 14 of 20) intron (NM_015569, intron 14 of 20) -7617 NR_103486 100628315 Hs.584880 NR_038397 ENSG00000230630 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA Merged-chr5-41744166-1 chr5 41744066 41744266 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000436, intron 15 of 16) L1PA5|LINE|L1 -125864 NR_046635 100874002 Hs.375537 NR_046635 ENSG00000248668 OXCT1-AS1 -0 OXCT1 antisense RNA 1 ncRNA Merged-chr1-65821099-1 chr1 65820999 65821199 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_002600, intron 1 of 16) intron (NM_002600, intron 1 of 16) 27926 NM_002600 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding Merged-chr17-62893193-1 chr17 62893093 62893293 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -51022 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA Merged-chr20-37994720-1 chr20 37994620 37994820 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014657, intron 8 of 8) intron (NM_014657, intron 8 of 8) 38748 NM_014657 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding Merged-chr12-56300465-1 chr12 56300365 56300565 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004077) promoter-TSS (NM_004077) -74 NM_004077 1431 Hs.743252 NM_004077 ENSG00000062485 CS -0 citrate synthase protein-coding Merged-chr9-76613546-1 chr9 76613446 76613646 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt non-coding (NR_131751, exon 16 of 16) non-coding (NR_131751, exon 16 of 16) 78869 NM_001330680 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr17-42518604-1 chr17 42518504 42518704 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001130021, intron 21 of 21) intron (NM_001130021, intron 21 of 21) 4416 NR_049808 100847046 NR_049808 ENSG00000033627 MIR5010 mir-5010 microRNA 5010 ncRNA Merged-chr19-47719154-1 chr19 47719054 47719254 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014601, intron 3 of 5) intron (NM_014601, intron 3 of 5) 5810 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding Merged-chr1-188499163-1 chr1 188499063 188499263 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic THE1-int|LTR|ERVL-MaLR 1055535 NR_132374 106144535 Hs.568709 NR_132374 ENSG00000231599 LINC01037 -0 long intergenic non-protein coding RNA 1037 ncRNA Merged-chr5-40689714-1 chr5 40689614 40689814 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_000958, intron 2 of 2) intron (NM_000958, intron 2 of 2) 9784 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding Merged-chr1-241519861-1 chr1 241519761 241519961 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_000143) promoter-TSS (NM_000143) -76 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|LRCC|MCL|MCUL1 fumarate hydratase protein-coding Merged-chr17-81991751-1 chr17 81991651 81991851 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330528, intron 3 of 14) intron (NM_001330528, intron 3 of 14) 14201 NM_001251888 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1, UBX domain containing tether for SLC2A4 protein-coding Merged-chr5-38872442-1 chr5 38872342 38872542 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001323505, intron 2 of 17) L2c|LINE|L2 26443 NM_001323504 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding Merged-chr21-26885371-1 chr21 26885271 26885471 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -39962 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding Merged-chr5-38809952-1 chr5 38809852 38810052 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_109951, intron 1 of 3) intron (NR_109951, intron 1 of 3) 35877 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA Merged-chr21-34836234-1 chr21 34836134 34836334 0 5.170000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001001890, intron 3 of 5) intron (NM_001001890, intron 3 of 5) 52456 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding Merged-chr1-8878750-2 chr1 8878621 8878879 0 5.165000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_038351) promoter-TSS (NR_038351) -85 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 -0 ENO1 antisense RNA 1 ncRNA Merged-chr6-24743418-1 chr6 24743318 24743518 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24243 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding Merged-chr8-118962080-1 chr8 118961980 118962180 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001324095, intron 1 of 7) intron (NM_001324095, intron 1 of 7) 9913 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 CL-34|CLL1 collectin subfamily member 10 protein-coding Merged-chr14-105491171-1 chr14 105491071 105491271 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001134875) promoter-TSS (NM_001134875) -78 NM_001134875 283643 Hs.720306 NM_173608 ENSG00000185347 C14orf80 -0 chromosome 14 open reading frame 80 protein-coding Merged-chr1-233636032-1 chr1 233635932 233636132 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002245, intron 1 of 2) L2a|LINE|L2 11880 NR_039625 100616390 NR_039625 ENSG00000265744 MIR4427 -0 microRNA 4427 ncRNA Merged-chr20-33993644-1 chr20 33993544 33993744 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016732) promoter-TSS (NM_016732) -8 NM_016732 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding Merged-chr19-48332957-1 chr19 48332857 48333057 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_130317, exon 6 of 6) non-coding (NR_130317, exon 6 of 6) 6958 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding Merged-chr19-11529236-1 chr19 11529136 11529336 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243204) promoter-TSS (NM_001243204) -64 NM_001142465 51295 Hs.515146 NM_016581 ENSG00000130159 ECSIT SITPEC ECSIT signalling integrator protein-coding Merged-chr11-62574084-1 chr11 62573984 62574184 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001404) promoter-TSS (NM_001404) -96 NM_001404 1937 Hs.144835 NM_001404 ENSG00000254772 EEF1G EF1G|GIG35 eukaryotic translation elongation factor 1 gamma protein-coding Merged-chr2-241508688-1 chr2 241508588 241508788 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282307) promoter-TSS (NM_001282307) 7 NM_001271979 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding Merged-chr1-206674939-1 chr1 206674839 206675039 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10081 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 mitogen-activated protein kinase-activated protein kinase 2 protein-coding Merged-chr2-207711458-1 chr2 207711358 207711558 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001142300) promoter-TSS (NM_001142300) -82 NM_001142300 151195 Hs.471234 NM_152523 ENSG00000163249 CCNYL1 -0 cyclin Y like 1 protein-coding Merged-chr7-44123652-1 chr7 44123552 44123752 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256879) promoter-TSS (NM_001256879) -82 NM_001127218 5425 Hs.306791 NM_006230 ENSG00000106628 POLD2 -0 DNA polymerase delta 2 accessory subunit protein-coding Merged-chr5-51383338-1 chr5 51383238 51383438 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_046243) promoter-TSS (NR_046243) -6 NR_046243 642366 Hs.544139 NR_046243 LOC642366 -0 uncharacterized LOC642366 ncRNA Merged-chr7-100538943-1 chr7 100538843 100539043 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006076) promoter-TSS (NM_006076) -268 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding Merged-chr14-21269690-1 chr14 21269590 21269790 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001077442) promoter-TSS (NM_001077442) -211 NM_031314 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding Merged-chr12-121400050-1 chr12 121399950 121400150 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256858) promoter-TSS (NM_001256858) -33 NM_025126 80196 Hs.292804 NM_025126 ENSG00000170633 RNF34 CARP-1|CARP1|RFI|RIF|RIFF|hRFI ring finger protein 34 protein-coding Merged-chr20-31952034-1 chr20 31951934 31952134 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030815) promoter-TSS (NM_030815) 46 NM_030815 81572 Hs.435755 NM_030815 ENSG00000088356 PDRG1 C20orf126|PDRG p53 and DNA damage regulated 1 protein-coding Merged-chr7-47482199-1 chr7 47482099 47482299 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) 99945 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Merged-chr16-70715380-1 chr16 70715280 70715480 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018052, intron 14 of 18) L2b|LINE|L2 -29329 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS1L ABBA|ABBA-1|ABBA1 MTSS1L, I-BAR domain containing protein-coding Merged-chr4-1043774-1 chr4 1043674 1043874 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 31310 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR5|FHFR fibroblast growth factor receptor-like 1 protein-coding Merged-chr21-39380348-1 chr21 39380248 39380448 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004627) promoter-TSS (NM_004627) 61 NM_004627 7485 Hs.198308 NM_004627 ENSG00000182093 WRB CHD5|GET1 tryptophan rich basic protein protein-coding Merged-chr22-44037705-1 chr22 44037605 44037805 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001243386, intron 1 of 11) intron (NM_001243386, intron 1 of 11) 11401 NM_001243386 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding Merged-chr6-90285743-1 chr6 90285643 90285843 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021813, intron 1 of 8) intron (NM_021813, intron 1 of 8) 11165 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25 BTB domain and CNC homolog 2 protein-coding Merged-chr11-66480360-1 chr11 66480260 66480460 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120586) promoter-TSS (NR_120586) -111 NR_120586 101928069 Hs.523816 NR_120586 ENSG00000255517 LOC101928069 -0 uncharacterized LOC101928069 ncRNA Merged-chr1-198682049-1 chr1 198681949 198682149 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001267798, intron 2 of 3) intron (NM_001267798, intron 2 of 3) 43081 NM_002838 5788 Hs.654514 NM_002838 ENSG00000081237 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type C protein-coding Merged-chr17-80008594-1 chr17 80008494 80008694 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 27264 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 -0 TBC1 domain family member 16 protein-coding Merged-chr10-8486190-1 chr10 8486090 8486290 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MD|LINE|L1 108201 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr5-177426406-1 chr5 177426306 177426506 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002082) promoter-TSS (NM_002082) -280 NM_001004105 2870 Hs.235116 NM_002082 ENSG00000198055 GRK6 GPRK6 G protein-coupled receptor kinase 6 protein-coding Merged-chr2-100903096-1 chr2 100902996 100903196 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002518, intron 1 of 20) intron (NM_002518, intron 1 of 20) 74065 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 -0 uncharacterized LOC101927142 ncRNA Merged-chr1-150697320-1 chr1 150697220 150697420 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018178) promoter-TSS (NM_018178) -124 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding Merged-chr1-71081216-1 chr1 71081116 71081316 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_046217) promoter-TSS (NR_046217) 73 NM_203350 9406 Hs.194718 NM_005455 ENSG00000132485 ZRANB2 ZIS|ZIS1|ZIS2|ZNF265 zinc finger RANBP2-type containing 2 protein-coding Merged-chr19-48714251-1 chr19 48714151 48714351 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001297753, intron 4 of 6) CpG 2706 NM_182574 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding Merged-chr20-45972546-1 chr20 45972446 45972646 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022095) promoter-TSS (NM_022095) -352 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding Merged-chr16-53703950-1 chr16 53703850 53704050 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001127897) promoter-TSS (NM_001127897) -12 NM_001328423 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding Merged-chr17-56915934-1 chr17 56915834 56916034 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1886 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding Merged-chr17-41496975-1 chr17 41496875 41497075 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7111 NM_003771 8689 Hs.248189 NM_003771 ENSG00000126337 KRT36 HA6|KRTHA6|hHa6 keratin 36 protein-coding Merged-chr4-88284715-1 chr4 88284615 88284815 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134238) promoter-TSS (NR_134238) 116 NM_152542 152926 Hs.43744 NM_152542 ENSG00000163644 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent 1K protein-coding Merged-chr14-104976336-1 chr14 104976236 104976436 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138420, intron 1 of 6) intron (NM_138420, intron 1 of 6) 2021 NM_138420 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding Merged-chr17-47240256-1 chr17 47240156 47240356 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13586 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding Merged-chr17-58417750-1 chr17 58417650 58417850 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017763) promoter-TSS (NM_017763) -168 NM_001305544 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding Merged-chr7-44082523-1 chr7 44082423 44082623 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284330) promoter-TSS (NM_001284330) 17 NR_104299 27434 Hs.596982 NM_013284 ENSG00000122678 POLM Pol Mu|Tdt-N DNA polymerase mu protein-coding Merged-chr3-153599938-1 chr3 153599838 153600038 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 115443 NM_001101337 152118 Hs.58586 NM_001101337 C3orf79 -0 chromosome 3 open reading frame 79 protein-coding Merged-chr11-34438796-1 chr11 34438696 34438896 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001752) promoter-TSS (NM_001752) -129 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT -0 catalase protein-coding Merged-chr17-68463163-1 chr17 68463063 68463263 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278433, intron 1 of 10) intron (NM_001278433, intron 1 of 10) -5639 NM_001320772 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding Merged-chr22-39592927-1 chr22 39592827 39593027 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021096, intron 1 of 36) intron (NM_021096, intron 1 of 36) 22174 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding Merged-chr17-55459262-1 chr17 55459162 55459362 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -37282 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding Merged-chr15-39405095-1 chr15 39404995 39405195 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 154426 NM_001302797 400360 Hs.376109 NM_207445 C15orf54 -0 chromosome 15 open reading frame 54 ncRNA Merged-chr18-57621882-1 chr18 57621782 57621982 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004539) promoter-TSS (NM_004539) 63 NM_004539 4677 Hs.465224 NM_004539 ENSG00000134440 NARS ASNRS|NARS1 asparaginyl-tRNA synthetase protein-coding Merged-chr4-2242227-1 chr4 2242127 2242327 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181808) promoter-TSS (NM_181808) -63 NM_001303143 79441 Hs.665869 NM_024511 ENSG00000214367 HAUS3 C4orf15|IT1|dgt3 HAUS augmin like complex subunit 3 protein-coding Merged-chr17-75633972-1 chr17 75633872 75634072 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001162995, exon 1 of 3) 5' UTR (NM_001162995, exon 1 of 3) 538 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding Merged-chr5-34924062-1 chr5 34923962 34924162 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018321, intron 8 of 9) intron (NM_018321, intron 8 of 9) -5531 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding Merged-chr1-153608985-1 chr1 153608885 153609085 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001317007, exon 1 of 3) 5' UTR (NM_001317007, exon 1 of 3) 370 NM_001317008 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding Merged-chr11-62706278-1 chr11 62706178 62706378 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032667) promoter-TSS (NM_032667) 37 NM_001130702 26580 Hs.533709 NM_032667 ENSG00000168000 BSCL2 GNG3LG|HMN5|PELD|SPG17 BSCL2, seipin lipid droplet biogenesis associated protein-coding Merged-chrX-19721907-1 chrX 19721807 19722007 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024666, intron 2 of 16) AluJr|SINE|Alu -50906 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3 domain containing kinase binding protein 1 protein-coding Merged-chr7-30504987-1 chr7 30504887 30505087 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199815) promoter-TSS (NM_001199815) -146 NM_001199817 79017 Hs.530024 NM_024051 ENSG00000006625 GGCT C7orf24|CRF21|GCTG|GGC gamma-glutamylcyclotransferase protein-coding Merged-chr11-61733616-1 chr11 61733516 61733716 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006133, intron 9 of 19) intron (NM_006133, intron 9 of 19) -19021 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF C11orf9|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding Merged-chr2-176491502-1 chr2 176491402 176491602 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 109550 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA Merged-chr17-81101952-1 chr17 81101852 81102052 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006340, intron 7 of 14) intron (NM_006340, intron 7 of 14) 23421 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA Merged-chr10-5944575-1 chr10 5944475 5944675 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 33036 NM_002189 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding Merged-chr6-125905084-1 chr6 125904984 125905184 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_181782, intron 10 of 15) intron (NM_181782, intron 10 of 15) -14140 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding Merged-chr15-78438099-1 chr15 78437999 78438199 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320942) promoter-TSS (NM_001320942) -77 NM_001320941 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRP2|IRP2AD iron responsive element binding protein 2 protein-coding Merged-chr6-166627451-1 chr6 166627351 166627551 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021135) promoter-TSS (NM_021135) -174 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding Merged-chr3-171306868-1 chr3 171306768 171306968 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001161560, intron 2 of 31) intron (NM_001161560, intron 2 of 31) 153540 NM_001161564 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding Merged-chr1-22750443-1 chr1 22750343 22750543 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001309192, intron 1 of 13) intron (NM_001309192, intron 1 of 13) 30926 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 -0 microRNA 4684 ncRNA Merged-chr11-62601873-1 chr11 62601773 62601973 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004739) promoter-TSS (NM_004739) -33 NM_004739 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding Merged-chr19-6425370-1 chr19 6425270 6425470 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003685) promoter-TSS (NM_003685) -559 NM_003685 8570 Hs.727344 NM_003685 ENSG00000088247 KHSRP FBP2|FUBP2|KSRP KH-type splicing regulatory protein protein-coding Merged-chr2-135876515-1 chr2 135876415 135876615 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005915) promoter-TSS (NM_005915) -38 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding Merged-chr8-60951211-1 chr8 60951111 60951311 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 16537 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 -0 hCG1816373-like ncRNA Merged-chr5-169583641-1 chr5 169583541 169583741 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017785) promoter-TSS (NM_017785) 7 NM_017785 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding Merged-chr2-95334060-1 chr2 95333960 95334160 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) -12960 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding Merged-chr15-22838634-1 chr15 22838534 22838734 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001008860) promoter-TSS (NM_001008860) -7 NM_001184889 81614 Hs.591003 NM_030922 ENSG00000140157 NIPA2 -0 non imprinted in Prader-Willi/Angelman syndrome 2 protein-coding Merged-chr5-43997917-1 chr5 43997817 43998017 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Penelope1_Vert|LINE|Penelope 390765 NM_004465 2255 Hs.248049 NM_004465 ENSG00000070193 FGF10 -0 fibroblast growth factor 10 protein-coding Merged-chr20-856539-1 chr20 856439 856639 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 11931 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding Merged-chr1-37859688-1 chr1 37859588 37859788 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005955) promoter-TSS (NM_005955) -68 NM_005955 4520 Hs.471991 NM_005955 ENSG00000188786 MTF1 MTF-1|ZRF metal regulatory transcription factor 1 protein-coding Merged-chr19-47113262-1 chr19 47113162 47113362 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015168, intron 1 of 14) (GAGGCG)n|Simple_repeat|Simple_repeat 490 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding Merged-chr14-89137639-1 chr14 89137539 89137739 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 279471 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding Merged-chr5-74316174-1 chr5 74316074 74316274 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6312 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 -0 long intergenic non-protein coding RNA 1333 ncRNA Merged-chr14-72643483-1 chr14 72643383 72643583 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001280542, intron 8 of 10) intron (NM_001280542, intron 8 of 10) 126663 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA Merged-chr1-6343710-1 chr1 6343610 6343810 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_007274, intron 2 of 8) intron (NM_007274, intron 2 of 8) 15234 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding Merged-chr1-233113064-1 chr1 233112964 233113164 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014801, intron 21 of 33) intron (NM_014801, intron 21 of 33) 162222 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase nucleoside-triphosphatase, cancer-related protein-coding Merged-chr7-56106547-1 chr7 56106447 56106647 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320327) promoter-TSS (NM_001320327) 83 NM_016139 51142 Hs.389996 NM_016139 ENSG00000106153 CHCHD2 C7orf17|MNRR1|NS2TP|PARK22 coiled-coil-helix-coiled-coil-helix domain containing 2 protein-coding Merged-chr18-3624381-1 chr18 3624281 3624481 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001003809, intron 4 of 9) intron (NM_001003809, intron 4 of 9) 20644 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 -0 DLGAP1 antisense RNA 2 ncRNA Merged-chr17-57834588-1 chr17 57834488 57834688 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 15484 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding Merged-chr4-48830961-1 chr4 48830861 48831061 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001079840) promoter-TSS (NM_001079840) -82 NM_001079840 54940 Hs.518750 NM_017830 ENSG00000109180 OCIAD1 ASRIJ|OCIA|TPA018 OCIA domain containing 1 protein-coding Merged-chr19-48872306-1 chr19 48872206 48872406 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014330) promoter-TSS (NM_014330) -86 NM_014330 23645 Hs.631593 NM_014330 ENSG00000087074 PPP1R15A GADD34 protein phosphatase 1 regulatory subunit 15A protein-coding Merged-chr11-3797693-1 chr11 3797593 3797793 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001283038) promoter-TSS (NM_001283038) -31 NM_001256235 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding Merged-chr1-31376917-1 chr1 31376817 31377017 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3629 NM_001320996 2170 Hs.576372 NM_004102 ENSG00000121769 FABP3 FABP11|H-FABP|M-FABP|MDGI|O-FABP fatty acid binding protein 3 protein-coding Merged-chr1-23404034-1 chr1 23403934 23404134 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003196, intron 5 of 10) MamRTE1|LINE|RTE-BovB 20745 NM_003196 6920 Hs.446354 NM_003196 ENSG00000204219 TCEA3 TFIIS|TFIIS.H transcription elongation factor A3 protein-coding Merged-chr5-98310118-1 chr5 98310018 98310218 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -459177 NM_001012761 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule family member b protein-coding Merged-chr22-37197351-1 chr22 37197251 37197451 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9061 NM_031910 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and tumor necrosis factor related protein 6 protein-coding Merged-chr11-19995335-1 chr11 19995235 19995435 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_182964, intron 11 of 37) intron (NM_182964, intron 11 of 37) -27221 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding Merged-chr2-128027403-1 chr2 128027303 128027503 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145928) promoter-TSS (NM_001145928) -108 NM_001145928 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 -0 Sin3A associated protein 130 protein-coding Merged-chr6-4358852-1 chr6 4358752 4358952 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -69150 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA Merged-chr19-47315529-1 chr19 47315429 47315629 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001736, intron 1 of 1) intron (NM_001736, intron 1 of 1) 5682 NM_001736 728 Hs.2161 NM_001736 ENSG00000197405 C5AR1 C5A|C5AR|C5R1|CD88 complement C5a receptor 1 protein-coding Merged-chr20-51327689-1 chr20 51327589 51327789 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 125288 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA Merged-chr2-64831395-1 chr2 64831295 64831495 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 32236 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 -0 long intergenic non-protein coding RNA 1800 ncRNA Merged-chr14-61695193-1 chr14 61695093 61695293 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001530) promoter-TSS (NM_001530) -208 NM_181054 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 alpha subunit protein-coding Merged-chr8-11854115-1 chr8 11854015 11854215 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001908, intron 1 of 9) intron (NM_001908, intron 1 of 9) 14035 NM_147783 1508 Hs.520898 NM_001908 ENSG00000164733 CTSB APPS|CPSB cathepsin B protein-coding Merged-chr2-30146591-1 chr2 30146491 30146691 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001127399) promoter-TSS (NM_001127399) -293 NM_001127400 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding Merged-chr17-7615085-1 chr17 7614985 7615185 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004860) promoter-TSS (NM_004860) -188 NM_004860 9513 Hs.52788 NM_004860 ENSG00000129245 FXR2 FMR1L2|FXR2P FMR1 autosomal homolog 2 protein-coding Merged-chr19-14529406-1 chr19 14529306 14529506 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001313964) promoter-TSS (NM_001313964) -84 NM_001313964 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding Merged-chr17-18856280-1 chr17 18856180 18856380 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243942) promoter-TSS (NM_001243942) -19 NM_001243936 5636 Hs.632236 NM_002767 ENSG00000141127 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase associated protein 2 protein-coding Merged-chrX-10633995-1 chrX 10633895 10634095 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -13361 NM_000381 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding Merged-chr22-40951271-2 chr22 40951167 40951376 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014248) promoter-TSS (NM_014248) -76 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding Merged-chr17-75557257-1 chr17 75557157 75557357 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004524, intron 3 of 24) intron (NM_004524, intron 3 of 24) -30801 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding Merged-chr20-10511720-1 chr20 10511620 10511820 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 76417 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding Merged-chr5-31811435-1 chr5 31811335 31811535 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 124724 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 -0 microRNA 4279 ncRNA Merged-chr19-48364099-1 chr19 48363999 48364199 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012451) promoter-TSS (NM_012451) 138 NM_001303539 55260 Hs.351335 NM_018273 ENSG00000161558 TMEM143 -0 transmembrane protein 143 protein-coding Merged-chr12-113040845-1 chr12 113040745 113040945 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -17012 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 hDx-1 deltex E3 ubiquitin ligase 1 protein-coding Merged-chr5-39077196-1 chr5 39077096 39077296 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2788 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding Merged-chr14-53011176-1 chr14 53011076 53011276 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -60079 NM_006832 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding Merged-chr12-56104368-1 chr12 56104268 56104468 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006191) promoter-TSS (NM_006191) 49 NM_006191 5036 Hs.524498 NM_006191 ENSG00000170515 PA2G4 EBP1|HG4-1|p38-2G4 proliferation-associated 2G4 protein-coding Merged-chr19-3035724-1 chr19 3035624 3035824 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001144761, intron 2 of 19) CpG -6110 NM_001144762 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 transducin like enhancer of split 2 protein-coding Merged-chr19-18021594-1 chr19 18021494 18021694 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 13426 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding Merged-chr14-103715581-1 chr14 103715481 103715681 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198953) promoter-TSS (NM_001198953) -95 NM_001100119 7517 Hs.592325 NM_005432 ENSG00000126215 XRCC3 CMM6 X-ray repair cross complementing 3 protein-coding Merged-chr3-124813014-1 chr3 124812914 124813114 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002213, intron 8 of 14) intron (NM_002213, intron 8 of 14) 74291 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 -0 integrin subunit beta 5 protein-coding Merged-chr1-21176968-1 chr1 21176868 21177068 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198801) promoter-TSS (NM_001198801) -80 NM_001198801 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding Merged-chr8-108443524-1 chr8 108443424 108443624 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329494) promoter-TSS (NM_001329494) -59 NM_001329495 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding Merged-chr5-42583449-1 chr5 42583349 42583549 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001242460, intron 1 of 7) intron (NM_001242460, intron 1 of 7) 17585 NM_001242460 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding Merged-chr3-48465656-1 chr3 48465556 48465756 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001271022) TTS (NM_001271022) 136 NM_007248 11277 Hs.707026 NM_007248 ENSG00000213689 TREX1 AGS1|CRV|DRN3|HERNS three prime repair exonuclease 1 protein-coding Merged-chr17-63275514-1 chr17 63275414 63275614 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025185, intron 7 of 24) intron (NM_025185, intron 7 of 24) 164697 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding Merged-chr4-140373423-1 chr4 140373323 140373523 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_033939) promoter-TSS (NR_033939) -31 NR_033939 100129858 Hs.660477 NR_033939 ENSG00000196951 SCOC-AS1 -0 SCOC antisense RNA 1 ncRNA Merged-chr10-102009948-1 chr10 102009848 102010048 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024541, intron 12 of 25) intron (NM_024541, intron 12 of 25) 46227 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 C10orf76 -0 chromosome 10 open reading frame 76 protein-coding Merged-chr18-76525403-1 chr18 76525303 76525503 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3252 NR_015417 284276 Hs.390287 NR_015417 ENSG00000263812 LINC00908 -0 long intergenic non-protein coding RNA 908 ncRNA Merged-chr17-40219276-1 chr17 40219176 40219376 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_133264) promoter-TSS (NM_133264) -46 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding Merged-chr1-45802867-1 chr1 45802767 45802967 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324320) promoter-TSS (NM_001324320) -740 NM_001324320 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding Merged-chr15-84734741-1 chr15 84734641 84734841 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJb|SINE|Alu -13846 NM_014630 9640 Hs.79347 NM_014630 ENSG00000166716 ZNF592 CAMOS|SCAR5 zinc finger protein 592 protein-coding Merged-chr11-70399971-1 chr11 70399871 70400071 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001184740, intron 1 of 18) intron (NM_001184740, intron 1 of 18) 1465 NM_138565 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding Merged-chr1-35557698-1 chr1 35557598 35557798 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001014839) promoter-TSS (NM_001014839) -94 NM_001014841 23154 Hs.121870 NM_014284 ENSG00000020129 NCDN -0 neurochondrin protein-coding Merged-chr12-121797228-1 chr12 121797128 121797328 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_002809, intron 5 of 6) CpG -3540 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding Merged-chr5-131797106-1 chr5 131797006 131797206 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001346113) promoter-TSS (NM_001346113) -43 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 -0 folliculin interacting protein 1 protein-coding Merged-chr5-132556865-1 chr5 132556765 132556965 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005732) promoter-TSS (NM_005732) -59 NM_005732 10111 Hs.633509 NM_005732 ENSG00000113522 RAD50 NBSLD|RAD502|hRad50 RAD50 double strand break repair protein protein-coding Merged-chr11-34685486-1 chr11 34685386 34685586 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 53022 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding Merged-chr16-31117521-1 chr16 31117421 31117621 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032188) promoter-TSS (NM_032188) -143 NM_032188 84148 Hs.533803 NM_032188 ENSG00000103510 KAT8 MOF|MYST1|ZC2HC8|hMOF lysine acetyltransferase 8 protein-coding Merged-chr19-16660234-1 chr19 16660134 16660334 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300925) promoter-TSS (NM_001300925) -77 NM_001300925 79086 Hs.356467 NM_024104 ENSG00000214046 SMIM7 C19orf42 small integral membrane protein 7 protein-coding Merged-chr9-81431879-1 chr9 81431779 81431979 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1H|LTR|ERVL-MaLR 257656 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr14-64914343-1 chr14 64914243 64914443 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001204063) promoter-TSS (NM_001204063) -18 NM_001204064 91612 Hs.731537 NM_145165 ENSG00000258289 CHURC1 C14orf52|My015|chch churchill domain containing 1 protein-coding Merged-chr2-217653488-1 chr2 217653388 217653588 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 103105 NR_026597 729582 Hs.572788 NR_026597 DIRC3 -0 disrupted in renal carcinoma 3 ncRNA Merged-chr3-136196493-1 chr3 136196393 136196593 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018133) promoter-TSS (NM_018133) -647 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 male-specific lethal 2 homolog (Drosophila) protein-coding Merged-chr11-207512-1 chr11 207412 207612 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001098787) promoter-TSS (NM_001098787) 1 NM_021932 60626 Hs.592292 NM_021932 ENSG00000177963 RIC8A RIC8 RIC8 guanine nucleotide exchange factor A protein-coding Merged-chr12-123233312-1 chr12 123233212 123233412 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022782) promoter-TSS (NM_022782) 15 NM_152269 91574 Hs.319128 NM_152269 ENSG00000130921 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding Merged-chr2-223465973-1 chr2 223465873 223466073 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR78B|LTR|ERV1 136526 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding Merged-chr2-197453317-1 chr2 197453217 197453417 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025147) promoter-TSS (NM_025147) -106 NM_001320818 80219 Hs.606592 NM_025147 ENSG00000115520 COQ10B -0 coenzyme Q10B protein-coding Merged-chr19-58451486-1 chr19 58451386 58451586 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_207395) promoter-TSS (NM_207395) -118 NM_207395 388569 Hs.186970 NM_207395 ENSG00000249471 ZNF324B -0 zinc finger protein 324B protein-coding Merged-chr1-151347374-1 chr1 151347274 151347474 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000449) promoter-TSS (NM_000449) -81 NM_000449 5993 Hs.632472 NM_000449 ENSG00000143390 RFX5 -0 regulatory factor X5 protein-coding Merged-chr7-76048054-1 chr7 76047954 76048154 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282404) promoter-TSS (NM_001282404) 35 NM_005918 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding Merged-chr4-7960867-1 chr4 7960767 7960967 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR47B4|LTR|ERVL -20941 NM_001134647 60312 Hs.529369 NM_021638 ENSG00000196526 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding Merged-chr10-102502855-1 chr10 102502755 102502955 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005736) promoter-TSS (NM_005736) -100 NM_005736 10121 Hs.153961 NM_005736 ENSG00000138107 ACTR1A ARP1|Arp1A|CTRN1 ARP1 actin-related protein 1 homolog A, centractin alpha protein-coding Merged-chr2-169694450-1 chr2 169694350 169694550 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001085447) promoter-TSS (NM_001085447) -4 NM_001199285 493911 Hs.745233 NM_001008489 ENSG00000144362 PHOSPHO2 -0 phosphatase, orphan 2 protein-coding Merged-chr1-27540495-1 chr1 27540395 27540595 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -50308 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WAS protein family member 2 protein-coding Merged-chr5-40437805-1 chr5 40437705 40437905 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -242125 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding Merged-chr17-38351814-1 chr17 38351714 38351914 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014598) promoter-TSS (NM_014598) -310 NM_014598 30837 Hs.514132 NM_014598 ENSG00000274211 SOCS7 NAP4|NCKAP4 suppressor of cytokine signaling 7 protein-coding Merged-chr6-142147171-1 chr6 142147071 142147271 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324308) promoter-TSS (NM_001324308) 9 NM_001286371 51534 Hs.431367 NM_016485 ENSG00000009844 VTA1 C6orf55|DRG-1|DRG1|HSPC228|LIP5|My012|SBP1 vesicle trafficking 1 protein-coding Merged-chr10-92591739-1 chr10 92591639 92591839 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1329 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding Merged-chr10-86399964-1 chr10 86399864 86400064 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -33471 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding Merged-chr17-38464873-1 chr17 38464773 38464973 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001199417, intron 6 of 23) intron (NM_001199417, intron 6 of 23) 36397 NM_001199417 57636 Hs.374446 NM_020876 ENSG00000275832 ARHGAP23 -0 Rho GTPase activating protein 23 protein-coding Merged-chr3-125063061-1 chr3 125062961 125063161 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7103 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding Merged-chr1-186730529-1 chr1 186730429 186730629 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 49875 NR_125801 103752588 Hs.441636 NR_125801 ENSG00000273129 PACERR PACER|PTGS2-AS1 PTGS2 antisense NFKB1 complex-mediated expression regulator RNA ncRNA Merged-chr1-23198611-1 chr1 23198511 23198711 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1ME3E|LINE|L1 -3882 NM_000864 3352 Hs.121482 NM_000864 ENSG00000179546 HTR1D 5-HT1D|HT1DA|HTR1DA|HTRL|RDC4 5-hydroxytryptamine receptor 1D protein-coding Merged-chr16-54929288-1 chr16 54929188 54929388 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001308963) promoter-TSS (NM_001308963) -99 NR_034105 643911 Hs.237396 NM_001308963 CRNDE CRNDEP|LINC00180|NCRNA00180|PNAS-108|lincIRX5 colorectal neoplasia differentially expressed (non-protein coding) protein-coding Merged-chr20-44610069-1 chr20 44609969 44610169 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001281444, intron 4 of 5) intron (NM_001281444, intron 4 of 5) 27520 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding Merged-chr19-38930863-1 chr19 38930763 38930963 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145901) promoter-TSS (NM_001145901) 33 NM_001145901 54938 Hs.709416 NM_017827 ENSG00000104835 SARS2 SARS|SARSM|SERS|SYS|SerRS|SerRSmt|mtSerRS seryl-tRNA synthetase 2 mitochondrial protein-coding Merged-chr5-69234822-1 chr5 69234722 69234922 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324078) promoter-TSS (NM_001324078) 27 NM_001324070 1022 Hs.184298 NM_001799 ENSG00000134058 CDK7 CAK|CAK1|CDKN7|HCAK|MO15|STK1|p39MO15 cyclin dependent kinase 7 protein-coding Merged-chr22-23145326-1 chr22 23145226 23145426 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004914) promoter-TSS (NM_004914) 0 NM_004914 9609 Hs.353024 NM_004914 ENSG00000100228 RAB36 -0 RAB36, member RAS oncogene family protein-coding Merged-chr19-33177300-1 chr19 33177200 33177400 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -17393 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 -0 LDL receptor related protein 3 protein-coding Merged-chr8-123396742-1 chr8 123396642 123396842 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014109) promoter-TSS (NM_014109) -277 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family, AAA domain containing 2 protein-coding Merged-chr1-21512160-1 chr1 21512060 21512260 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) 2802 NM_001177520 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNAP|TNSALP alkaline phosphatase, liver/bone/kidney protein-coding Merged-chr17-45321069-1 chr17 45320969 45321169 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4005 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding Merged-chr2-231708366-1 chr2 231708266 231708466 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001099285) promoter-TSS (NM_001099285) -159 NM_002823 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin, alpha protein-coding Merged-chr12-56636968-1 chr12 56636868 56637068 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013449) promoter-TSS (NM_013449) -589 NM_013449 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding Merged-chr3-149377735-1 chr3 149377635 149377835 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_046650) promoter-TSS (NR_046650) -43 NR_109810 100874091 Hs.549633 NR_046650 ENSG00000240541 TM4SF1-AS1 -0 TM4SF1 antisense RNA 1 ncRNA Merged-chr17-2396820-1 chr17 2396720 2396920 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020310, intron 1 of 5) intron (NM_020310, intron 1 of 5) 4144 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding Merged-chr17-74043029-1 chr17 74042929 74043129 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -160627 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding Merged-chr1-15949752-1 chr1 15949652 15949852 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003443, intron 2 of 15) intron (NM_003443, intron 2 of 15) 26380 NM_001324138 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding Merged-chr4-52712366-1 chr4 52712266 52712466 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_039651) promoter-TSS (NR_039651) -28 NR_024031 57291 Hs.744077 NR_024031 ENSG00000226950 DANCR AGU2|ANCR|KIAA0114|SNHG13|lncRNA-ANCR differentiation antagonizing non-protein coding RNA ncRNA Merged-chr10-12078510-1 chr10 12078410 12078610 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018706, intron 1 of 16) AluSx|SINE|Alu 9593 NM_018706 55526 Hs.104980 NM_018706 ENSG00000181192 DHTKD1 AMOXAD|CMT2Q dehydrogenase E1 and transketolase domain containing 1 protein-coding Merged-chr2-219598152-1 chr2 219598052 219598252 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_052902, exon 2 of 25) exon (NM_052902, exon 2 of 25) 301 NM_052902 114790 Hs.22410 NM_052902 ENSG00000144589 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding Merged-chr19-49876656-1 chr19 49876556 49876756 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278159) promoter-TSS (NM_001278159) -407 NM_001278159 84335 Hs.515542 NM_032375 ENSG00000204673 AKT1S1 Lobe|PRAS40 AKT1 substrate 1 protein-coding Merged-chr16-58129464-1 chr16 58129364 58129564 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_136632) promoter-TSS (NR_136632) -39 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding Merged-chr19-35405464-1 chr19 35405364 35405564 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_040046) promoter-TSS (NR_040046) -143 NR_040046 100128682 Hs.570008 NR_040046 ENSG00000205786 LINC01531 -0 long intergenic non-protein coding RNA 1531 ncRNA Merged-chr19-47048704-1 chr19 47048604 47048804 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017854) promoter-TSS (NM_017854) -80 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 -0 transmembrane protein 160 protein-coding Merged-chr1-244048301-1 chr1 244048201 244048401 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278196) promoter-TSS (NM_001278196) -638 NM_001278196 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding Merged-chr1-3901450-1 chr1 3901350 3901550 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_024455, intron 1 of 3) CpG 1046 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 -0 long intergenic non-protein coding RNA 1134 ncRNA Merged-chr22-39292722-1 chr22 39292622 39292822 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR 21189 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA Merged-chr3-99817837-1 chr3 99817737 99817937 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032359) promoter-TSS (NM_032359) 3 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog (yeast) protein-coding Merged-chr17-67422055-1 chr17 67421955 67422155 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) 44774 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding Merged-chr4-139301320-1 chr4 139301220 139301420 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001184986) promoter-TSS (NM_001184986) -86 NM_002494 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding Merged-chr6-37630539-1 chr6 37630439 37630639 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1M|LTR|ERVL-MaLR 67451 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding Merged-chr17-54948619-1 chr17 54948519 54948719 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321175, intron 13 of 16) L2a|LINE|L2 -20146 NM_178509 252983 Hs.35199 NM_178509 ENSG00000166263 STXBP4 Synip syntaxin binding protein 4 protein-coding Merged-chr6-166557090-1 chr6 166556990 166557190 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -12400 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding Merged-chr3-183099583-1 chr3 183099483 183099683 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120639) promoter-TSS (NR_120639) 4 NR_120639 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding Merged-chr11-65570310-1 chr11 65570210 65570410 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303024) promoter-TSS (NM_001303024) 103 NR_038923 254100 Hs.595927 NR_038923 SSSCA1-AS1 -0 SSSCA1 antisense RNA 1 (head to head) ncRNA Merged-chr1-66925316-1 chr1 66925216 66925416 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024763) promoter-TSS (NM_024763) 421 NM_001146112 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding Merged-chrX-11759522-1 chrX 11759422 11759622 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006800) promoter-TSS (NM_006800) -94 NM_006800 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 male-specific lethal 3 homolog (Drosophila) protein-coding Merged-chr14-23321296-1 chr14 23321196 23321396 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_004643, exon 1 of 7) 5' UTR (NM_004643, exon 1 of 7) 1108 NM_004643 8106 Hs.707712 NM_004643 ENSG00000100836 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein nuclear 1 protein-coding Merged-chr19-45817323-1 chr19 45817223 45817423 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004819, intron 23 of 26) intron (NM_004819, intron 23 of 26) -1976 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding Merged-chr6-112037970-1 chr6 112037870 112038070 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER5B|DNA|hAT-Charlie -16105 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 WISP3 CCN6|LIBC|PPAC|PPD|WISP-3 WNT1 inducible signaling pathway protein 3 protein-coding Merged-chr15-70892627-1 chr15 70892527 70892727 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020147) promoter-TSS (NM_020147) 184 NM_001199018 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding Merged-chr17-38349344-1 chr17 38349244 38349444 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2780 NM_014598 30837 Hs.514132 NM_014598 ENSG00000274211 SOCS7 NAP4|NCKAP4 suppressor of cytokine signaling 7 protein-coding Merged-chr3-157081736-1 chr3 157081636 157081836 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135546) promoter-TSS (NR_135546) -105 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 -0 long intergenic non-protein coding RNA 2029 ncRNA Merged-chr7-21427385-1 chr7 21427285 21427485 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_137166) promoter-TSS (NR_137166) -649 NM_001326543 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding Merged-chr5-73448765-1 chr5 73448665 73448865 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004472) promoter-TSS (NM_004472) -238 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding Merged-chr14_GL000225v1_random-13577-1 chr14_GL000225v1_random 13477 13677 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt NA BSR/Beta|Satellite|Satellite NA NA Merged-chr18-3247430-1 chr18 3247330 3247530 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303048) promoter-TSS (NM_001303048) -52 NM_001303048 10627 Hs.190086 NM_006471 ENSG00000101608 MYL12A HEL-S-24|MLC-2B|MLCB|MRCL3|MRLC3|MYL2B myosin light chain 12A protein-coding Merged-chr12-124411661-1 chr12 124411561 124411761 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001077261, intron 15 of 47) intron (NM_001077261, intron 15 of 47) -74419 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA Merged-chr6-79545227-1 chr6 79545127 79545327 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7797 NM_001122769 167691 Hs.21945 NM_181714 ENSG00000135338 LCA5 C6orf152 LCA5, lebercilin protein-coding Merged-chr2-213284270-1 chr2 213284170 213284370 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001025436) promoter-TSS (NM_001025436) -61 NM_001242575 100130451 Hs.608433 NM_001242575 LOC100130451 -0 uncharacterized LOC100130451 protein-coding Merged-chr2-237128502-1 chr2 237128402 237128602 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 43061 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding Merged-chr7-43302331-1 chr7 43302231 43302431 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015052, intron 3 of 29) intron (NM_015052, intron 3 of 29) 151436 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 -0 microRNA 3943 ncRNA Merged-chr3-129183966-1 chr3 129183866 129184066 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001127192) promoter-TSS (NM_001127192) 1 NM_001127196 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding Merged-chr17-66467118-1 chr17 66467018 66467218 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -50264 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 -0 PRKCA antisense RNA 1 ncRNA Merged-chr17-48506074-1 chr17 48505974 48506174 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 24836 NM_002144 3211 Hs.99992 NM_002144 ENSG00000120094 HOXB1 HCFP3|HOX2|HOX2I|Hox-2.9 homeobox B1 protein-coding Merged-chrX-11537427-1 chrX 11537327 11537527 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -109642 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding Merged-chr18-48942788-1 chr18 48942688 48942888 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001190823) promoter-TSS (NM_001190823) 19 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding Merged-chr17-39770274-1 chr17 39770174 39770374 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001257413, intron 3 of 3) intron (NM_001257413, intron 3 of 3) 7951 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding Merged-chr12-48157589-1 chr12 48157489 48157689 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319296) promoter-TSS (NM_001319296) 6 NM_001319299 140461 Hs.432699 NM_024095 ENSG00000177981 ASB8 PP14212 ankyrin repeat and SOCS box containing 8 protein-coding Merged-chr10-27504294-1 chr10 27504194 27504394 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_046172, exon 1 of 6) non-coding (NR_046172, exon 1 of 6) 120 NM_001256412 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding Merged-chr3-193872590-1 chr3 193872490 193872690 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR 121648 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 -0 developmental pluripotency associated 2 pseudogene 3 pseudo Merged-chr17-48026680-1 chr17 48026580 48026780 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016429, intron 8 of 8) intron (NM_016429, intron 8 of 8) 10567 NR_029687 406943 NR_029687 ENSG00000207947 MIR152 MIRN152|mir-152 microRNA 152 ncRNA Merged-chr1-24365378-1 chr1 24365278 24365478 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_198174) TTS (NM_198174) 42338 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding Merged-chr14-20455146-1 chr14 20455046 20455246 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017807) promoter-TSS (NM_017807) 15 NM_001641 328 Hs.73722 NM_001641 ENSG00000100823 APEX1 APE|APE1|APEN|APEX|APX|HAP1|REF1 apurinic/apyrimidinic endodeoxyribonuclease 1 protein-coding Merged-chr21-33011639-1 chr21 33011539 33011739 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14269 NM_005806 10215 Hs.176977 NM_005806 ENSG00000205927 OLIG2 BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19 oligodendrocyte lineage transcription factor 2 protein-coding Merged-chr19-42397026-1 chr19 42396926 42397126 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_073180) promoter-TSS (NR_073180) -102 NR_126041 101930071 Hs.567935 NR_126041 ENSG00000213904 LOC101930071 -0 uncharacterized LOC101930071 ncRNA Merged-chr1-3900842-1 chr1 3900742 3900942 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_207356) promoter-TSS (NM_207356) 438 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 -0 long intergenic non-protein coding RNA 1134 ncRNA Merged-chr17-55433799-1 chr17 55433699 55433899 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11819 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding Merged-chr8-93741059-1 chr8 93740959 93741159 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_203390) promoter-TSS (NM_203390) -63 NM_203390 389677 Hs.606916 NM_203390 ENSG00000183808 RBM12B MGC:33837 RNA binding motif protein 12B protein-coding Merged-chr3-128650872-1 chr3 128650772 128650972 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002950) promoter-TSS (NM_002950) 4 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding Merged-chr6-31827356-1 chr6 31827256 31827456 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005346).5 promoter-TSS (NM_005346).5 -379 NM_005346 3304 Hs.274402 NM_005346 ENSG00000204388 HSPA1B HSP70-1B|HSP70-2|HSP70.2 heat shock protein family A (Hsp70) member 1B protein-coding Merged-chr15-40906234-1 chr15 40906134 40906334 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135836) promoter-TSS (NR_135836) -575 NR_135836 105370943 Hs.574244 NR_135836 LOC105370943 -0 uncharacterized LOC105370943 ncRNA Merged-chr15-62897157-1 chr15 62897057 62897257 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 73200 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA Merged-chr12-122501013-1 chr12 122500913 122501113 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017612) promoter-TSS (NM_017612) 60 NM_017612 55596 Hs.37706 NM_017612 ENSG00000033030 ZCCHC8 -0 zinc finger CCHC-type containing 8 protein-coding Merged-chr2-109614162-1 chr2 109614062 109614262 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321514) promoter-TSS (NM_001321514) 44 NM_001321498 151011 Hs.469615 NM_144710 ENSG00000186522 SEPT10 -0 septin 10 protein-coding Merged-chr8-133375710-1 chr8 133375610 133375810 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -78406 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding Merged-chrUn_KI270442v1-391617-1 chrUn_KI270442v1 391517 391717 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt NA (CA)n|Simple_repeat|Simple_repeat NA NA Merged-chr1-154220688-1 chr1 154220588 154220788 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001287815) promoter-TSS (NM_001287815) 109 NM_001297723 25912 Hs.287471 NM_015449 ENSG00000143612 C1orf43 HSPC012|NICE-3|NS5ATP4|S863-3 chromosome 1 open reading frame 43 protein-coding Merged-chr6-33200734-1 chr6 33200634 33200834 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001288777) promoter-TSS (NM_001288777) -38 NM_021976 6257 Hs.388034 NM_021976 ENSG00000204231 RXRB DAUDI6|H-2RIIBP|NR2B2|RCoR-1 retinoid X receptor beta protein-coding Merged-chr6-149233369-1 chr6 149233269 149233469 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) 15445 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding Merged-chr1-221742200-1 chr1 221742100 221742300 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007207) promoter-TSS (NM_007207) -24 NM_007207 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding Merged-chr4-128288026-1 chr4 128287926 128288126 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_006320, exon 1 of 3) 5' UTR (NM_006320, exon 1 of 3) 803 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding Merged-chr19-17938432-1 chr19 17938332 17938532 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138442, intron 2 of 4) intron (NM_138442, intron 2 of 4) 3336 NM_138442 115098 Hs.100043 NM_138442 ENSG00000007080 CCDC124 -0 coiled-coil domain containing 124 protein-coding Merged-chr5-34839032-1 chr5 34838932 34839132 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144725) promoter-TSS (NM_144725) -132 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding Merged-chr19-6424956-1 chr19 6424856 6425056 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003685) promoter-TSS (NM_003685) -145 NM_003685 8570 Hs.727344 NM_003685 ENSG00000088247 KHSRP FBP2|FUBP2|KSRP KH-type splicing regulatory protein protein-coding Merged-chr8-66113324-1 chr8 66113224 66113424 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -13719 NM_184085 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding Merged-chrX-103152355-1 chrX 103152255 103152455 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -59261 NM_022052 56000 Hs.60386 NM_022052 ENSG00000147206 NXF3 -0 nuclear RNA export factor 3 protein-coding Merged-chr5-144170706-1 chr5 144170606 144170806 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001024947) promoter-TSS (NM_001024947) 8 NM_030799 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding Merged-chr19-49487404-1 chr19 49487304 49487504 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_073024) promoter-TSS (NR_073024) -150 NR_073024 23521 Hs.523185 NM_012423 ENSG00000142541 RPL13A L13A|TSTA1 ribosomal protein L13a protein-coding Merged-chr10-78756924-1 chr10 78756824 78757024 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 310524 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 -0 ZMIZ1 antisense RNA 1 ncRNA Merged-chr5-167815066-1 chr5 167814966 167815166 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 60130 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding Merged-chrX-1754267-1 chrX 1754167 1754367 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 139134 NM_001171039 438 Hs.522572 NM_004043 ENSG00000196433 ASMT ASMTY|HIOMT|HIOMTY acetylserotonin O-methyltransferase protein-coding Merged-chr14-74620620-1 chr14 74620520 74620720 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -8289 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding Merged-chr16-58661316-1 chr16 58661216 58661416 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 23391 NM_001308384 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding Merged-chr19-7829735-1 chr19 7829635 7829835 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145245) promoter-TSS (NM_145245) -540 NM_145245 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L -0 ecotropic viral integration site 5 like protein-coding Merged-chr6-132814432-1 chr6 132814332 132814532 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001016) promoter-TSS (NM_001016) -137 NM_001016 6206 Hs.546289 NM_001016 ENSG00000112306 RPS12 S12 ribosomal protein S12 protein-coding Merged-chr16-15056256-1 chr16 15056156 15056356 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270766) promoter-TSS (NM_001270766) -177 NM_001270766 123803 Hs.592045 NM_173474 ENSG00000157045 NTAN1 PNAA|PNAD N-terminal asparagine amidase protein-coding Merged-chr19-41264160-1 chr19 41264060 41264260 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007040) promoter-TSS (NM_007040) -14 NM_007040 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding Merged-chr22-30224324-1 chr22 30224224 30224424 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 22527 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI leukemia inhibitory factor protein-coding Merged-chr5-148965920-1 chr5 148965820 148966020 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic hAT-N1_Mam|DNA|hAT-Tip100? 96489 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA Merged-chr17-42517744-1 chr17 42517644 42517844 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001130021, intron 21 of 21) intron (NM_001130021, intron 21 of 21) 3556 NR_049808 100847046 NR_049808 ENSG00000033627 MIR5010 mir-5010 microRNA 5010 ncRNA Merged-chr1-27672342-1 chr1 27672242 27672442 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002038) promoter-TSS (NM_002038) -129 NM_002038 2537 Hs.523847 NM_002038 ENSG00000126709 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon alpha inducible protein 6 protein-coding Merged-chr8-141154243-1 chr8 141154143 141154343 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014957, intron 7 of 22) intron (NM_014957, intron 7 of 22) 25622 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 -0 DENN domain containing 3 protein-coding Merged-chr1-16139696-1 chr1 16139596 16139796 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329090, intron 2 of 15) intron (NM_001329090, intron 2 of 15) 16413 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr2-65130365-1 chr2 65130265 65130465 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004161) promoter-TSS (NM_004161) -64 NM_015543 5861 Hs.310645 NM_004161 ENSG00000138069 RAB1A RAB1|YPT1 RAB1A, member RAS oncogene family protein-coding Merged-chr12-49741403-1 chr12 49741303 49741503 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003217) promoter-TSS (NM_003217) -107 NM_003217 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding Merged-chr10-26861214-1 chr10 26861114 26861314 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001178120) promoter-TSS (NM_001178120) -127 NM_001178121 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding Merged-chr19-11559287-1 chr19 11559187 11559387 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032377) promoter-TSS (NM_032377) -51 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding Merged-chr16-56608512-1 chr16 56608412 56608612 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005953) promoter-TSS (NM_005953) -54 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT2 metallothionein 2A protein-coding Merged-chr9-112041859-1 chr9 112041759 112041959 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022486, intron 16 of 16) intron (NM_022486, intron 16 of 16) 109759 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA Merged-chr22-38181904-1 chr22 38181804 38182004 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001004426) promoter-TSS (NM_001004426) -75 NM_001199562 8398 Hs.170479 NM_003560 ENSG00000184381 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2 group VI protein-coding Merged-chr17-75693837-1 chr17 75693737 75693937 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301839, intron 3 of 9) intron (NM_001301839, intron 3 of 9) -26648 NM_001003716 9400 Hs.632229 NM_004259 ENSG00000108469 RECQL5 RECQ5 RecQ like helicase 5 protein-coding Merged-chr22-30196421-1 chr22 30196321 30196521 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 50430 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI leukemia inhibitory factor protein-coding Merged-chr20-25136803-1 chr20 25136703 25136903 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1F|LTR|ERVL-MaLR 11190 NR_027093 284798 Hs.334934 NR_027091 ENSG00000230725 LOC284798 -0 uncharacterized LOC284798 ncRNA Merged-chr5-34929379-1 chr5 34929279 34929479 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001012339) promoter-TSS (NM_001012339) -214 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding Merged-chr2-217105906-1 chr2 217105806 217106006 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic X2_LINE|LINE|CR1 -176827 NR_133642 105373877 NR_133642 DIRC3-AS1 -0 DIRC3 antisense RNA 1 ncRNA Merged-chr6-42547732-1 chr6 42547632 42547832 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -16290 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding Merged-chr18-22223836-1 chr18 22223736 22223936 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 54399 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 -0 GATA binding protein 6 protein-coding Merged-chr1-9303263-1 chr1 9303163 9303363 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025106, intron 1 of 2) ERVL-int|LTR|ERVL 10381 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding Merged-chr7-25857143-1 chr7 25857043 25857243 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 92843 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA Merged-chr1-87226472-1 chr1 87226372 87226572 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001290053, intron 2 of 3) intron (NM_001290053, intron 2 of 3) 13803 NM_001290053 101927844 Hs.694591 NM_001290053 LOC101927844 -0 uncharacterized LOC101927844 protein-coding Merged-chr17-65390165-1 chr17 65390065 65390265 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER117|DNA|hAT-Charlie -67376 NR_131984 105827617 NR_131984 ENSG00000263520 CRAT40 -0 cervical cancer-associated transcript 40 ncRNA Merged-chr16-21300729-1 chr16 21300629 21300829 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026675) promoter-TSS (NR_026675) -120 NR_026675 400508 Hs.578949 NM_001101368 CRYM-AS1 NCRNA00169 CRYM antisense RNA 1 ncRNA Merged-chr19-11597341-1 chr19 11597241 11597441 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001290083) promoter-TSS (NM_001290083) -79 NM_145295 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 -0 zinc finger protein 627 protein-coding Merged-chr1-211597504-1 chr1 211597404 211597604 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MamRTE1|LINE|RTE-BovB -18747 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding Merged-chr17-51260397-1 chr17 51260297 51260497 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016001) promoter-TSS (NM_016001) -139 NM_016001 51096 Hs.709327 NM_016001 ENSG00000011260 UTP18 CGI-48|WDR50 UTP18, small subunit processome component protein-coding Merged-chr6-143427467-1 chr6 143427367 143427567 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001286259, exon 6 of 6) 3' UTR (NM_001286259, exon 6 of 6) 15210 NM_001286259 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase, tRNA specific 2 protein-coding Merged-chrX-19991228-1 chrX 19991128 19991328 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1449 NR_024440 729609 Hs.554726 NR_024440 LOC729609 -0 uncharacterized LOC729609 ncRNA Merged-chr5-124402266-1 chr5 124402166 124402366 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125774, intron 3 of 5) intron (NR_125774, intron 3 of 5) 36254 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 -0 long intergenic non-protein coding RNA 1170 ncRNA Merged-chr2-160208247-1 chr2 160208147 160208347 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7934 NM_001282388 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding Merged-chr6-16339107-1 chr6 16339007 16339207 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001128164, intron 6 of 7) intron (NM_001128164, intron 6 of 7) 100527 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding Merged-chr12-56688478-1 chr12 56688378 56688578 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_104219) promoter-TSS (NR_104219) -70 NM_001282605 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding Merged-chr22-27919475-1 chr22 27919375 27919575 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284278) promoter-TSS (NM_001284278) 99 NR_026963 284900 Hs.602319 NR_026962 ENSG00000235954 TTC28-AS1 TTC28-AS|TTC28AS|dJ353E16.2 TTC28 antisense RNA 1 ncRNA Merged-chr17-4967359-1 chr17 4967259 4967459 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001171167) TTS (NM_001171167) 478 NM_004890 9552 Hs.90436 NM_004890 ENSG00000091640 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding Merged-chr1-27097554-1 chr1 27097454 27097654 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 57576 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding Merged-chr20-3811852-2 chr20 3811749 3811956 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_109859, intron 3 of 3) intron (NR_109859, intron 3 of 3) 3358 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 -0 long intergenic non-protein coding RNA 1730 ncRNA Merged-chr11-64241373-1 chr11 64241273 64241473 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_057092) promoter-TSS (NM_057092) 241 NM_001135208 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|PPIase FK506 binding protein 2 protein-coding Merged-chr15-85800653-1 chr15 85800553 85800753 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -5695 NM_022480 64410 Hs.498371 NM_022480 ENSG00000183655 KLHL25 ENC-2|ENC2 kelch like family member 25 protein-coding Merged-chr10-95694154-1 chr10 95694054 95694254 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001143973) promoter-TSS (NM_001143973) -11 NM_015631 26123 Hs.438991 NM_015631 ENSG00000119977 TCTN3 C10orf61|JBTS18|OFD4|TECT3 tectonic family member 3 protein-coding Merged-chr1-15765971-1 chr1 15765871 15766071 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024216, intron 1 of 4) intron (NM_001024216, intron 1 of 4) 1007 NM_001024216 54751 Hs.530101 NM_017556 ENSG00000162458 FBLIM1 CAL|FBLP-1|FBLP1 filamin binding LIM protein 1 protein-coding Merged-chr1-209884877-1 chr1 209884777 209884977 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -53297 NM_153262 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding Merged-chr5-40904927-1 chr5 40904827 40905027 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4325 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 -0 complement C7 protein-coding Merged-chr11-83071889-1 chr11 83071789 83071989 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038903) promoter-TSS (NR_038903) 34 NM_001286060 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 -0 RAB30, member RAS oncogene family protein-coding Merged-chr10-77582984-1 chr10 77582884 77583084 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 54835 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding Merged-chr6-159984466-1 chr6 159984366 159984566 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000876, intron 1 of 47) Tigger3c|DNA|TcMar-Tigger 15367 NM_000876 3482 Hs.487062 NM_000876 ENSG00000197081 IGF2R CD222|CI-M6PR|CIMPR|M6P-R|M6P/IGF2R|MPR 300|MPR1|MPR300|MPRI insulin like growth factor 2 receptor protein-coding Merged-chr16-70779119-1 chr16 70779019 70779219 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018052, intron 9 of 18) intron (NM_018052, intron 9 of 18) 22039 NM_018052 55697 Hs.445061 NM_018052 ENSG00000103043 VAC14 ArPIKfyve|SNDC|TAX1BP2|TRX Vac14, PIKFYVE complex component protein-coding Merged-chr5-40835296-1 chr5 40835196 40835396 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000997) promoter-TSS (NM_000997) -11 NM_000997 6167 Hs.447582 NM_000997 ENSG00000145592 RPL37 L37 ribosomal protein L37 protein-coding Merged-chr4-56387492-1 chr4 56387392 56387592 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286668) promoter-TSS (NM_001286668) 16 NM_001286671 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding Merged-chr19-49496269-1 chr19 49496169 49496369 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001015) promoter-TSS (NM_001015) -96 NM_001015 6205 Hs.433529 NM_001015 ENSG00000142534 RPS11 S11 ribosomal protein S11 protein-coding Merged-chr5-149440184-1 chr5 149440084 149440284 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR 9538 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA Merged-chr12-50112007-1 chr12 50111907 50112107 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001257133) promoter-TSS (NM_001257133) 26 NM_001257133 84987 Hs.388645 NM_032901 ENSG00000178449 COX14 C12orf62|PCAG1 COX14, cytochrome c oxidase assembly factor protein-coding Merged-chr12-6532758-1 chr12 6532658 6532858 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_014865) TTS (NM_014865) -1647 NM_001289745 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding Merged-chr20-41028563-1 chr20 41028463 41028663 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003286) promoter-TSS (NM_003286) -255 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI topoisomerase (DNA) I protein-coding Merged-chr6-3002008-1 chr6 3001908 3002108 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318940, intron 1 of 6) intron (NM_001318940, intron 1 of 6) 1850 NM_001318940 4835 Hs.533050 NM_000904 ENSG00000124588 NQO2 DHQV|DIA6|NMOR2|QR2 NAD(P)H quinone dehydrogenase 2 protein-coding Merged-chr17-40318141-2 chr17 40318018 40318264 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001145301) promoter-TSS (NM_001145301) -80 NM_001145302 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding Merged-chrX-10726763-1 chrX 10726663 10726863 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) -49024 NM_001098624 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding Merged-chr1-244452190-1 chr1 244452090 244452290 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001126) promoter-TSS (NM_001126) -56 NM_001126 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2 adenylosuccinate synthase protein-coding Merged-chr17-63406879-1 chr17 63406779 63406979 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025185, intron 19 of 24) intron (NM_025185, intron 19 of 24) 33332 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding Merged-chr14-75002823-1 chr14 75002723 75002923 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014239) promoter-TSS (NM_014239) -86 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding Merged-chr16-2223495-1 chr16 2223395 2223595 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001288776) promoter-TSS (NM_001288776) 7 NM_001288776 1877 Hs.513268 NM_004424 ENSG00000167967 E4F1 E4F E4F transcription factor 1 protein-coding Merged-chr17-82458194-1 chr17 82458094 82458294 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031968) promoter-TSS (NM_031968) 10 NM_001038618 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding Merged-chr17-41738207-1 chr17 41738107 41738307 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR -3561 NM_001079870 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding Merged-chr17-71976209-1 chr17 71976109 71976309 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49770 NR_110876 102723505 Hs.547482 NR_110876 ENSG00000228639 LINC02095 -0 long intergenic non-protein coding RNA 2095 ncRNA Merged-chr1-32992589-1 chr1 32992489 32992689 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -27776 NM_001127361 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding Merged-chr5-40756001-1 chr5 40755901 40756101 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012382) promoter-TSS (NM_012382) -31 NM_012382 23548 Hs.348915 NM_012382 ENSG00000113638 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding Merged-chr20-50030125-1 chr20 50030025 50030225 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 11504 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA Merged-chr10-103273229-1 chr10 103273129 103273329 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3934 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding Merged-chr6-139375540-1 chr6 139375440 139375640 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006079) promoter-TSS (NM_006079) -890 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding Merged-chr17-7252140-1 chr17 7252040 7252240 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_203415) promoter-TSS (NM_203415) -61 NM_203413 23587 Hs.417029 NM_015362 ENSG00000170291 ELP5 C17orf81|DERP6|HSPC002|MST071|MSTP071 elongator acetyltransferase complex subunit 5 protein-coding Merged-chr22-36328888-1 chr22 36328788 36328988 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002473, intron 3 of 40) intron (NM_002473, intron 3 of 40) -41981 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA Merged-chr1-153566735-1 chr1 153566635 153566835 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005978) promoter-TSS (NM_005978) -905 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding Merged-chr17-80893041-1 chr17 80892941 80893141 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 19 of 33) intron (NM_020761, intron 19 of 33) -87409 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chr10-126063592-1 chr10 126063492 126063692 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288973, intron 14 of 22) intron (NM_001288973, intron 14 of 22) -90319 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 -0 FANK1 antisense RNA 1 ncRNA Merged-chr6-159900738-1 chr6 159900638 159900838 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6204 NM_002377 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding Merged-chr12-98515553-1 chr12 98515453 98515653 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001307975) promoter-TSS (NM_001307975) -20 NM_001307975 7112 Hs.11355 NM_003276 ENSG00000120802 TMPO CMD1T|LAP2|LEMD4|PRO0868|TP thymopoietin protein-coding Merged-chr5-35062208-1 chr5 35062108 35062308 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001204314, exon 7 of 7) 3' UTR (NM_001204314, exon 7 of 7) -14073 NM_001306173 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding Merged-chr16-22298498-1 chr16 22298398 22298598 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258035, intron 1 of 19) MIR|SINE|MIR 1123 NR_047581 55718 Hs.460298 NM_018119 ENSG00000058600 POLR3E RPC5|SIN RNA polymerase III subunit E protein-coding Merged-chr2-231464490-1 chr2 231464390 231464590 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005381) promoter-TSS (NM_005381) 4 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23 nucleolin protein-coding Merged-chr10-96375522-1 chr10 96375422 96375622 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012465, intron 18 of 20) MER91B|DNA|hAT-Tip100 -16157 NM_033207 93377 Hs.12449 NM_033207 ENSG00000197430 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding Merged-chr22-30423992-1 chr22 30423892 30424092 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001204204, exon 10 of 10) 3' UTR (NM_001204204, exon 10 of 10) -1631 NM_016498 51537 Hs.713636 NM_016498 ENSG00000242114 MTFP1 HSPC242|MTP18 mitochondrial fission process 1 protein-coding Merged-chr2-197500012-1 chr2 197499912 197500112 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002156) promoter-TSS (NM_002156) 15 NM_001202485 100529241 Hs.633165 NM_001202485 ENSG00000270757 HSPE1-MOB4 HSPE1-PHOCN HSPE1-MOB4 readthrough protein-coding Merged-chr14-67241220-1 chr14 67241120 67241320 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256550) promoter-TSS (NM_001256550) -75 NM_001256550 64398 Hs.652312 NM_022474 ENSG00000072415 MPP5 PALS1 membrane palmitoylated protein 5 protein-coding Merged-chr1-46183333-1 chr1 46183233 46183433 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005727, intron 3 of 8) intron (NM_005727, intron 3 of 8) -6838 NM_001328655 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding Merged-chr2-112692670-1 chr2 112692570 112692770 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 46813 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding Merged-chr15-42920936-1 chr15 42920836 42921036 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_173500) promoter-TSS (NM_173500) -127 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding Merged-chr9-41230062-1 chr9 41229962 41230162 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (TG)n|Simple_repeat|Simple_repeat -3693 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A -0 microRNA 4477a ncRNA Merged-chr1-19505110-1 chr1 19505010 19505210 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19469 NM_004930 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line beta subunit protein-coding Merged-chr17-77288916-1 chr17 77288816 77289016 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001113492, intron 1 of 11) intron (NM_001113492, intron 1 of 11) 1025 NM_001113492 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr1-26306593-1 chr1 26306493 26306693 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001077262, exon 1 of 11) 5' UTR (NM_001077262, exon 1 of 11) 111 NM_183008 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding Merged-chr19-18522424-1 chr19 18522324 18522524 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006532) promoter-TSS (NM_006532) -297 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding Merged-chr17-77430455-1 chr17 77430355 77430555 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -20076 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr16-50025071-1 chr16 50024971 50025171 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001281789) promoter-TSS (NM_001281789) -135 NM_153261 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding Merged-chr15-44427541-1 chr15 44427441 44427641 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_016396, exon 1 of 13) 5' UTR (NM_016396, exon 1 of 13) 160 NM_016396 51496 Hs.497967 NM_016396 ENSG00000137770 CTDSPL2 HSPC058|HSPC129 CTD small phosphatase like 2 protein-coding Merged-chr3-170222315-1 chr3 170222215 170222415 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002740) promoter-TSS (NM_002740) -117 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding Merged-chr17-55273728-1 chr17 55273628 55273828 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330375, intron 2 of 3) intron (NM_001330375, intron 2 of 3) 7506 NM_001330375 3131 Hs.196952 NM_002126 ENSG00000108924 HLF -0 HLF, PAR bZIP transcription factor protein-coding Merged-chr3-119310233-1 chr3 119310133 119310333 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020754, intron 1 of 11) intron (NM_020754, intron 1 of 11) 12527 NR_046748 100874246 Hs.607097 NR_046748 ENSG00000241155 ARHGAP31-AS1 -0 ARHGAP31 antisense RNA 1 ncRNA Merged-chr7-44848300-1 chr7 44848200 44848400 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138635) promoter-TSS (NM_138635) -174 NM_201516 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding Merged-chrX-44873024-1 chrX 44872924 44873124 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_111960) promoter-TSS (NR_111960) -151 NR_111960 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding Merged-chr20-5126604-1 chr20 5126504 5126704 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003818) promoter-TSS (NM_003818) 18 NM_002592 5111 Hs.147433 NM_002592 ENSG00000132646 PCNA ATLD2 proliferating cell nuclear antigen protein-coding Merged-chr7-47336353-1 chr7 47336253 47336453 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022748, intron 20 of 30) MER63D|DNA|hAT-Blackjack 245791 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Merged-chr5-149212355-1 chr5 149212255 149212455 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001345859, intron 7 of 20) intron (NM_001345859, intron 7 of 20) -59483 NM_001146337 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 -0 actin filament associated protein 1 like 1 protein-coding Merged-chr1-51878870-1 chr1 51878770 51878970 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001242361) promoter-TSS (NM_001242361) 67 NM_002525 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding Merged-chr6-108689420-1 chr6 108689320 108689520 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -62234 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA Merged-chr1-3543172-1 chr1 3543072 3543272 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 17618 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA Merged-chr1-117166314-1 chr1 117166214 117166414 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_045603, intron 2 of 5) intron (NR_045603, intron 2 of 5) 37522 NM_001253849 79679 Hs.546434 NM_024626 ENSG00000134258 VTCN1 B7-H4|B7H4|B7S1|B7X|B7h.5|PRO1291|VCTN1 V-set domain containing T cell activation inhibitor 1 protein-coding Merged-chr1-16237211-1 chr1 16237111 16237311 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030907) promoter-TSS (NM_030907) -47 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 RSG1 C1orf89 REM2 and RAB like small GTPase 1 protein-coding Merged-chr10-97640534-1 chr10 97640434 97640634 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018425) promoter-TSS (NM_018425) -152 NM_018425 55361 Hs.25300 NM_018425 ENSG00000155252 PI4K2A PI4KII|PIK42A phosphatidylinositol 4-kinase type 2 alpha protein-coding Merged-chr3-123688505-1 chr3 123688405 123688605 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_053026, intron 18 of 32) L2a|LINE|L2 -1139 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 -0 MYLK antisense RNA 2 ncRNA Merged-chr3-184812127-1 chr3 184812027 184812227 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001009921) promoter-TSS (NM_001009921) -16 NM_001009921 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8, CORVET complex subunit protein-coding Merged-chr7-47979515-1 chr7 47979415 47979615 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_004507, exon 1 of 8) exon (NM_004507, exon 1 of 8) 110 NM_004507 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding Merged-chr17-1115328-1 chr17 1115228 1115428 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322840, intron 2 of 22).2 L2b|LINE|L2 -6228 NM_001092 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB active BCR-related protein-coding Merged-chr5-34717926-2 chr5 34717777 34718076 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 30367 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr2-73233396-1 chr2 73233296 73233496 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001009570) promoter-TSS (NM_001009570) -112 NR_144358 84279 Hs.61268 NM_032319 ENSG00000135617 PRADC1 C2orf7|PAP21 protease associated domain containing 1 protein-coding Merged-chr15-38130899-1 chr15 38130799 38130999 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 90506 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LOC101928227 -0 uncharacterized LOC101928227 ncRNA Merged-chr5-134556165-1 chr5 134556065 134556265 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015288, intron 4 of 10) intron (NM_015288, intron 4 of 10) 30057 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding Merged-chr2-62705581-1 chr2 62705481 62705681 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001142616) promoter-TSS (NM_001142616) -285 NM_015252 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding Merged-chr5-140647733-1 chr5 140647633 140647833 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001185012) promoter-TSS (NM_001185012) 52 NM_001185012 4695 Hs.75914 NM_002488 ENSG00000131495 NDUFA2 B8|CD14|CIB8 NADH:ubiquinone oxidoreductase subunit A2 protein-coding Merged-chr7-36303551-1 chr7 36303451 36303651 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 63622 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 -0 KIAA0895 protein-coding Merged-chr1-65174718-1 chr1 65174618 65174818 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330616, intron 1 of 4) intron (NM_001330616, intron 1 of 4) 25715 NM_001330616 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding Merged-chr16-23504907-1 chr16 23504807 23505007 0 5.160000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015044, intron 1 of 16) intron (NM_015044, intron 1 of 16) 5587 NM_015044 23062 Hs.460336 NM_015044 ENSG00000103365 GGA2 VEAR golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding Merged-chr1-145892199-2 chr1 145892003 145892395 0 5.135000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 3' UTR (NM_003637, exon 30 of 30) 3' UTR (NM_003637, exon 30 of 30) -6333 NM_144698 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 -0 ankyrin repeat domain 35 protein-coding Merged-chr5-178154010-2 chr5 178153908 178154112 0 5.035000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001034833) promoter-TSS (NM_001034833) -50 NM_001034833 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding Merged-chr14-35292255-2 chr14 35292151 35292359 0 5.015000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001282233) promoter-TSS (NM_001282233) -62 NM_001282233 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding Merged-chr1-183943071-2 chr1 183942934 183943209 0 5.015000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015101, intron 10 of 11) intron (NM_015101, intron 10 of 11) 94699 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding Merged-chr2-9703387-2 chr2 9703285 9703490 0 5.005000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -72332 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding Merged-chr1-6199670-2 chr1 6199558 6199782 0 5.005000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_000983) promoter-TSS (NM_000983) -51 NM_000983 6146 Hs.515329 NM_000983 ENSG00000116251 RPL22 EAP|HBP15|HBP15/L22|L22 ribosomal protein L22 protein-coding Merged-chr19-18486619-2 chr19 18486502 18486737 0 5.005000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 35508 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding Merged-chr14-58749245-2 chr14 58749114 58749377 0 4.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -79043 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 -0 long intergenic non-protein coding RNA 1500 ncRNA Merged-chr17-82216768-2 chr17 82216654 82216882 0 4.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -3939 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 -0 coiled-coil domain containing 57 protein-coding Merged-chr1-24745151-2 chr1 24745043 24745259 0 4.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_013943) promoter-TSS (NM_013943) -118 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding Merged-chr17-61504917-2 chr17 61504781 61505054 0 4.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 48429 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box 4 protein-coding Merged-chr10-70170603-2 chr10 70170491 70170715 0 4.995000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001142648) promoter-TSS (NM_001142648) -74 NM_001142648 56681 Hs.499960 NM_020150 ENSG00000079332 SAR1A SAR1|SARA1|Sara|masra2 secretion associated Ras related GTPase 1A protein-coding Merged-chr19-18323241-2 chr19 18323063 18323420 0 4.870000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001252129) promoter-TSS (NM_001252129) -50 NM_001252129 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding Merged-chr2-74458259-2 chr2 74458132 74458387 0 4.870000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_012477) promoter-TSS (NM_012477) -141 NM_012477 23559 Hs.516114 NM_012477 ENSG00000239779 WBP1 WBP-1 WW domain binding protein 1 protein-coding Merged-chr17-78879745-2 chr17 78879625 78879865 0 4.865000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 23472 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding Merged-chr5-154198367-2 chr5 154198233 154198501 0 4.865000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_198321, intron 1 of 11) MIR|SINE|MIR 7632 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding Merged-chr16-4768779-1 chr16 4768679 4768879 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1561 NM_021646 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding Merged-chr4-37686597-1 chr4 37686497 37686697 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001085399) promoter-TSS (NM_001085399) -220 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 -0 RELT like 1 protein-coding Merged-chr2-3377913-1 chr2 3377813 3378013 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330531) promoter-TSS (NM_001330531) 19 NM_001330531 7260 Hs.502770 NM_003310 ENSG00000032389 TSSC1 EIPR1 tumor suppressing subtransferable candidate 1 protein-coding Merged-chr1-224503596-1 chr1 224503496 224503696 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 68701 NM_001322303 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding Merged-chr6-169163128-1 chr6 169163028 169163228 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_132623) promoter-TSS (NR_132623) -139 NR_132623 101929484 Hs.364166 NR_132622 ENSG00000223485 LINC01615 -0 long intergenic non-protein coding RNA 1615 ncRNA Merged-chr11-36456047-1 chr11 36455947 36456147 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001160168, intron 5 of 5) intron (NM_001160168, intron 5 of 5) 54266 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding Merged-chr10-126350674-1 chr10 126350574 126350774 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288973, intron 1 of 22) MIRc|SINE|MIR 37884 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding Merged-chr3-129226601-1 chr3 129226501 129226701 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -23009 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding Merged-chr20-35412045-1 chr20 35411945 35412145 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001184977) promoter-TSS (NM_001184977) 97 NM_018244 55245 Hs.726290 NM_018244 ENSG00000101019 UQCC1 BFZB|C20orf44|CBP3|UQCC ubiquinol-cytochrome c reductase complex assembly factor 1 protein-coding Merged-chr16-10877147-1 chr16 10877047 10877247 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286403) promoter-TSS (NM_001286403) -51 NM_001286402 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding Merged-chr3-152258559-1 chr3 152258459 152258659 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9909 NM_001314057 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding Merged-chr15-40565138-1 chr15 40565038 40565238 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001289132) promoter-TSS (NM_001289132) -81 NM_052849 90416 Hs.654661 NM_052849 ENSG00000128891 C15orf57 CCDC32 chromosome 15 open reading frame 57 protein-coding Merged-chr1-10108468-1 chr1 10108368 10108568 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001105562, intron 7 of 27) intron (NM_001105562, intron 7 of 27) 75485 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding Merged-chr2-238684605-1 chr2 238684505 238684705 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -129106 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 -0 long intergenic non-protein coding RNA 1107 ncRNA Merged-chr12-110502172-1 chr12 110502072 110502272 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016226) promoter-TSS (NM_016226) -28 NM_001286535 144715 Hs.97794 NM_152442 ENSG00000151164 RAD9B -0 RAD9 checkpoint clamp component B protein-coding Merged-chr1-58755439-1 chr1 58755339 58755539 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 28674 NM_002228 3725 Hs.696684 NM_002228 ENSG00000177606 JUN AP-1|AP1|c-Jun Jun proto-oncogene, AP-1 transcription factor subunit protein-coding Merged-chr4-26015494-1 chr4 26015394 26015594 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 101302 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7 small integral membrane protein 20 protein-coding Merged-chr7-54759270-1 chr7 54759170 54759370 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110040) promoter-TSS (NR_110040) -24 NM_001012456 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 Sec61 translocon gamma subunit protein-coding Merged-chr10-5684759-1 chr10 5684659 5684859 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135800) promoter-TSS (NR_135800) -79 NM_001321783 54906 Hs.610717 NM_017782 ENSG00000108021 FAM208B C10orf18|bA318E3.2 family with sequence similarity 208 member B protein-coding Merged-chr22-36644481-1 chr22 36644381 36644581 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006078, intron 1 of 3) intron (NM_006078, intron 1 of 3) 58164 NM_006078 10369 Hs.146766 NM_006078 ENSG00000166862 CACNG2 MRD10 calcium voltage-gated channel auxiliary subunit gamma 2 protein-coding Merged-chr18-74546761-1 chr18 74546661 74546861 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032649, intron 1 of 11) intron (NM_032649, intron 1 of 11) 12304 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding Merged-chr4-140524069-1 chr4 140523969 140524169 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153702) promoter-TSS (NM_153702) -89 NM_153702 255520 Hs.450105 NM_153702 ENSG00000179387 ELMOD2 9830169G11Rik ELMO domain containing 2 protein-coding Merged-chr19-38658830-1 chr19 38658730 38658930 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322033, intron 1 of 20) intron (NM_001322033, intron 1 of 20) 11214 NM_004924 81 Hs.270291 NM_004924 ENSG00000130402 ACTN4 ACTININ-4|FSGS|FSGS1 actinin alpha 4 protein-coding Merged-chr11-5280750-1 chr11 5280650 5280850 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10607 NM_005330 3046 Hs.655195 NM_005330 ENSG00000213931 HBE1 HBE hemoglobin subunit epsilon 1 protein-coding Merged-chr1-27863351-1 chr1 27863251 27863451 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9192 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1 thymocyte selection associated family member 2 protein-coding Merged-chr9-109600364-1 chr9 109600264 109600464 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR33|LTR|ERVL -40424 NM_001037293 114299 Hs.591908 NM_053016 ENSG00000157654 PALM2 AKAP2 paralemmin 2 protein-coding Merged-chr19-58362896-1 chr19 58362796 58362996 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001207009) promoter-TSS (NM_001207009) -48 NM_198458 162968 Hs.447840 NM_198458 ENSG00000174586 ZNF497 -0 zinc finger protein 497 protein-coding Merged-chr7-107168875-1 chr7 107168775 107168975 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001244262) promoter-TSS (NM_001244262) -86 NM_001244262 26959 Hs.162032 NM_012257 ENSG00000105856 HBP1 -0 HMG-box transcription factor 1 protein-coding Merged-chr6-158069010-1 chr6 158068910 158069110 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001178088, intron 12 of 25) intron (NM_001178088, intron 12 of 25) 51962 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding Merged-chr2-206159515-1 chr2 206159415 206159615 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199983) promoter-TSS (NM_001199983) 4 NM_001199981 4719 Hs.471207 NM_005006 ENSG00000023228 NDUFS1 CI-75Kd|CI-75k|PRO1304 NADH:ubiquinone oxidoreductase core subunit S1 protein-coding Merged-chr14-90383321-1 chr14 90383221 90383421 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -13662 NM_006888 801 Hs.282410 NM_006888 ENSG00000198668 CALM1 CALML2|CAMI|CPVT4|DD132|LQT14|PHKD|caM calmodulin 1 protein-coding Merged-chr17-4796140-1 chr17 4796040 4796240 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270481) promoter-TSS (NM_001270481) -4 NM_002798 5694 Hs.77060 NM_002798 ENSG00000142507 PSMB6 DELTA|LMPY|Y proteasome subunit beta 6 protein-coding Merged-chr7-47669635-1 chr7 47669535 47669735 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 14391 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 -0 chromosome 7 open reading frame 65 protein-coding Merged-chr1-2391625-1 chr1 2391525 2391725 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007033) promoter-TSS (NM_007033) 126 NR_125361 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 -0 MORN repeat containing 1 protein-coding Merged-chr4-2536419-1 chr4 2536319 2536519 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 66966 NM_001185009 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding Merged-chr1-10210408-1 chr1 10210308 10210508 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_183416) promoter-TSS (NM_183416) -298 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding Merged-chr14-89504819-1 chr14 89504719 89504919 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -71397 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA Merged-chr17-81868659-1 chr17 81868559 81868759 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001301242, exon 7 of 7) exon (NM_001301242, exon 7 of 7) 2315 NM_001185077 396 Hs.159161 NM_004309 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor alpha protein-coding Merged-chr1-23868371-1 chr1 23868271 23868471 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000147) promoter-TSS (NM_000147) -2 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA fucosidase, alpha-L- 1 tissue protein-coding Merged-chr10-78972786-1 chr10 78972686 78972886 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 94662 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 -0 ZMIZ1 antisense RNA 1 ncRNA Merged-chr14-71753202-1 chr14 71753102 71753302 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 165631 NM_001284247 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1 signal induced proliferation associated 1 like 1 protein-coding Merged-chr14-52729988-1 chr14 52729888 52730088 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130701) promoter-TSS (NM_001130701) -177 NM_145251 6815 Hs.364980 NM_145251 ENSG00000198252 STYX -0 serine/threonine/tyrosine interacting protein protein-coding Merged-chr16-75254678-1 chr16 75254578 75254778 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001170720, intron 1 of 7) intron (NM_001170720, intron 1 of 7) -3050 NM_014567 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding Merged-chr1-26620657-1 chr1 26620557 26620757 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 66115 NR_031740 100302190 NR_031740 ENSG00000238705 MIR1976 hsa-mir-1976 microRNA 1976 ncRNA Merged-chr1-211382787-1 chr1 211382687 211382887 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026761) promoter-TSS (NR_026761) 32 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA Merged-chr6-18155331-1 chr6 18155231 18155431 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153042) promoter-TSS (NM_153042) -57 NM_153042 221656 Hs.709336 NM_153042 ENSG00000165097 KDM1B AOF1|C6orf193|LSD2|bA204B7.3|dJ298J15.2 lysine demethylase 1B protein-coding Merged-chr14-69716700-1 chr14 69716600 69716800 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -50387 NM_006925 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding Merged-chr1-36151002-1 chr1 36150902 36151102 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001270895, intron 1 of 4) intron (NM_001270895, intron 1 of 4) -1488 NM_014408 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding Merged-chr11-74171167-1 chr11 74171067 74171267 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286577) promoter-TSS (NM_001286577) 104 NM_016147 51400 Hs.503251 NM_016147 ENSG00000214517 PPME1 PME-1 protein phosphatase methylesterase 1 protein-coding Merged-chr19-49085234-1 chr19 49085134 49085334 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003089) promoter-TSS (NM_003089) 94 NM_003089 6625 Hs.467097 NM_003089 ENSG00000104852 SNRNP70 RNPU1Z|RPU1|SNRP70|Snp1|U1-70K|U170K|U1AP|U1RNP small nuclear ribonucleoprotein U1 subunit 70 protein-coding Merged-chr12-98593562-1 chr12 98593462 98593662 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002635) promoter-TSS (NM_002635) -63 NM_002635 5250 Hs.290404 NM_002635 ENSG00000075415 SLC25A3 OK/SW-cl.48|PHC|PTP solute carrier family 25 member 3 protein-coding Merged-chr9-100099157-1 chr9 100099057 100099257 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014425) promoter-TSS (NM_014425) -28 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding Merged-chr1-235067797-1 chr1 235067697 235067897 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_027454, exon 3 of 4) non-coding (NR_027454, exon 3 of 4) 2021 NR_027454 731656 Hs.702477 NR_027454 LINC01348 -0 long intergenic non-protein coding RNA 1348 ncRNA Merged-chr3-161890244-1 chr3 161890144 161890344 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR28B|LTR|ERV1 393436 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15 otolin 1 protein-coding Merged-chr1-43834631-1 chr1 43834531 43834731 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_174963, intron 5 of 12) L2|LINE|L2 -3991 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA Merged-chr11-66002106-1 chr11 66002006 66002206 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001242481) promoter-TSS (NM_001242481) 27 NM_001143985 8815 Hs.433759 NM_003860 ENSG00000175334 BANF1 BAF|BCRP1|D14S1460|NGPS barrier to autointegration factor 1 protein-coding Merged-chr12-116738210-1 chr12 116738110 116738310 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024738) promoter-TSS (NM_024738) -81 NM_032814 84900 Hs.437195 NM_032814 ENSG00000135119 RNFT2 TMEM118 ring finger protein, transmembrane 2 protein-coding Merged-chr22-42614917-1 chr22 42614817 42615017 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278657) promoter-TSS (NM_001278657) 45 NR_103820 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding Merged-chr15-89243953-1 chr15 89243853 89244053 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001113378) promoter-TSS (NM_001113378) -10 NM_018193 55215 Hs.513126 NM_018193 ENSG00000140525 FANCI KIAA1794 Fanconi anemia complementation group I protein-coding Merged-chr12-105420928-1 chr12 105420828 105421028 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 90292 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding Merged-chr1-26907752-1 chr1 26907652 26907852 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 6324 NM_021969 8431 Hs.427055 NM_021969 ENSG00000131910 NR0B2 SHP|SHP1 nuclear receptor subfamily 0 group B member 2 protein-coding Merged-chr19-8444953-1 chr19 8444853 8445053 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031203) promoter-TSS (NM_031203) 34 NM_031203 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding Merged-chr10-3173023-1 chr10 3172923 3173123 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014889) promoter-TSS (NM_014889) -182 NR_144639 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding Merged-chrX-30889394-1 chrX 30889294 30889494 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152787) promoter-TSS (NM_152787) 0 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding Merged-chr19-54137149-1 chr19 54137049 54137249 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014516).2 promoter-TSS (NM_014516).2 -571 NM_014516 4849 Hs.343571 NM_014516 ENSG00000088038 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex subunit 3 protein-coding Merged-chr9-91164843-1 chr9 91164743 91164943 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 45781 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA Merged-chr10-79151831-1 chr10 79151731 79151931 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 82796 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger MIZ-type containing 1 protein-coding Merged-chr6-44246909-1 chr6 44246809 44247009 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007355) promoter-TSS (NM_007355) -49 NM_001271972 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding Merged-chr19-31214310-1 chr19 31214210 31214410 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 135215 NR_138034 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding Merged-chr8-144147904-1 chr8 144147804 144148004 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001099280) promoter-TSS (NM_001099280) -112 NM_001099281 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding Merged-chr16-29973724-1 chr16 29973624 29973824 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004783) promoter-TSS (NM_004783) -143 NM_001252043 9344 Hs.291623 NM_004783 ENSG00000149930 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding Merged-chr11-43831052-1 chr11 43830952 43831152 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016142, intron 7 of 10) intron (NM_016142, intron 7 of 10) -49755 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3 alpha-ketoglutaratedependent dioxygenase protein-coding Merged-chr7-1513495-1 chr7 1513395 1513595 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9113 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding Merged-chr16-57628506-1 chr16 57628406 57628606 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001145771, exon 1 of 15) 5' UTR (NM_001145771, exon 1 of 15) 280 NM_001145771 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding Merged-chr1-28328972-1 chr1 28328872 28329072 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001127350) promoter-TSS (NM_001127350) -30 NM_001127350 54797 Hs.479911 NM_017638 ENSG00000130772 MED18 p28b mediator complex subunit 18 protein-coding Merged-chr1-26695663-1 chr1 26695563 26695763 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_139135) promoter-TSS (NM_139135) -368 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding Merged-chr8-121724684-1 chr8 121724584 121724784 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -83294 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 -0 hyaluronan synthase 2 protein-coding Merged-chr17-1684942-1 chr17 1684842 1685042 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006445) promoter-TSS (NM_006445) -60 NM_006445 10594 Hs.181368 NM_006445 ENSG00000174231 PRPF8 HPRP8|PRP8|PRPC8|RP13|SNRNP220 pre-mRNA processing factor 8 protein-coding Merged-chr5-91848543-1 chr5 91848443 91848643 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16D2|LTR|ERVL -465170 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding Merged-chr2-46224965-1 chr2 46224865 46225065 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1F|LTR|ERVL-MaLR -72437 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding Merged-chr1-17588622-1 chr1 17588522 17588722 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001319837, intron 3 of 25) intron (NM_001319837, intron 3 of 25) 8069 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding Merged-chr19-6361479-1 chr19 6361379 6361579 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006012) promoter-TSS (NM_006012) 27 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding Merged-chr10-84328319-1 chr10 84328219 84328419 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284241) promoter-TSS (NM_001284241) -270 NM_001284240 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding Merged-chr4-108058900-1 chr4 108058800 108059000 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001130714, intron 9 of 9) intron (NM_001130714, intron 9 of 9) 54236 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding Merged-chr14-23095262-1 chr14 23095162 23095362 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017924) promoter-TSS (NM_017924) -212 NM_017924 55017 Hs.525238 NM_017924 ENSG00000179933 C14orf119 -0 chromosome 14 open reading frame 119 protein-coding Merged-chr4-152779798-1 chr4 152779698 152779898 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_145720) promoter-TSS (NM_145720) -34 NM_145720 201798 Hs.301243 NM_145720 ENSG00000169989 TIGD4 -0 tigger transposable element derived 4 protein-coding Merged-chr6-149032108-1 chr6 149032008 149032208 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134599, intron 1 of 1) intron (NR_134599, intron 1 of 1) 553 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 -0 uncharacterized LOC105378047 ncRNA Merged-chr7-47786807-1 chr7 47786707 47786907 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138295, intron 56 of 56) intron (NM_138295, intron 56 of 56) -8484 NM_025031 80099 Hs.287647 NM_025031 C7orf69 -0 chromosome 7 open reading frame 69 protein-coding Merged-chr1-3624814-1 chr1 3624714 3624914 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_182752) promoter-TSS (NM_182752) -178 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding Merged-chr1-3504351-1 chr1 3504251 3504451 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001409, intron 17 of 36) intron (NM_001409, intron 17 of 36) 49768 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding Merged-chr3-172520581-1 chr3 172520481 172520681 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001190943, intron 1 of 1) intron (NM_001190943, intron 1 of 1) 2894 NM_001190943 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL tumor necrosis factor superfamily member 10 protein-coding Merged-chr11-9314942-1 chr11 9314842 9315042 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015012) promoter-TSS (NM_015012) -174 NR_028491 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B -0 transmembrane protein 41B protein-coding Merged-chr12-20212877-1 chr12 20212777 20212977 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -156368 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding Merged-chr9-92325633-1 chr9 92325533 92325733 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256394) promoter-TSS (NM_001256394) -39 NM_001256394 55035 Hs.442199 NM_017948 ENSG00000198000 NOL8 C9orf34|NOP132|bA62C3.3|bA62C3.4 nucleolar protein 8 protein-coding Merged-chr19-7479603-1 chr19 7479503 7479703 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_080662, intron 3 of 4) intron (NM_080662, intron 3 of 4) -6242 NR_024491 100128573 Hs.465761 NR_024491 LOC100128573 -0 uncharacterized LOC100128573 ncRNA Merged-chr5-34586316-1 chr5 34586216 34586416 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -70012 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Merged-chr16-66552515-1 chr16 66552415 66552615 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001040138) promoter-TSS (NM_001040138) -48 NM_181640 51192 Hs.15159 NM_016326 ENSG00000217555 CKLF C32|CKLF1|CKLF2|CKLF3|CKLF4|HSPC224|UCK-1 chemokine like factor protein-coding Merged-chr15-63108019-1 chr15 63107919 63108119 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13781 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding Merged-chr18-76460096-1 chr18 76459996 76460196 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -31556 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 -0 uncharacterized LOC101927989 ncRNA Merged-chrX-22134959-1 chrX 22134859 22135059 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282754, intron 12 of 20) intron (NM_001282754, intron 12 of 20) 38024 NR_046639 100873942 Hs.633194 NR_046639 ENSG00000224204 PHEX-AS1 -0 PHEX antisense RNA 1 ncRNA Merged-chr1-65261087-1 chr1 65260987 65261187 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3607 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding Merged-chr11-65556001-1 chr11 65555901 65556101 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001164266, intron 1 of 26) intron (NM_001164266, intron 1 of 26) 2227 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding Merged-chr2-234949901-1 chr2 234949801 234950001 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2083 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding Merged-chrX-22950442-1 chrX 22950342 22950542 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073010, intron 3 of 11) MER63A|DNA|hAT-Blackjack -49519 NM_182699 168400 Hs.434416 NM_182699 ENSG00000184735 DDX53 CAGE|CT26 DEAD-box helicase 53 protein-coding Merged-chr15-59372959-1 chr15 59372859 59373059 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004998) promoter-TSS (NM_004998) -87 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding Merged-chr1-42941940-1 chr1 42941840 42942040 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006516, intron 2 of 9) intron (NM_006516, intron 2 of 9) -17109 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 -0 SLC2A1 antisense RNA 1 ncRNA Merged-chr3-185688939-1 chr3 185688839 185689039 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_138486, intron 6 of 15) intron (NR_138486, intron 6 of 15) -24313 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA Merged-chr16-4944983-1 chr16 4944883 4945083 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7848 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL -0 periplakin protein-coding Merged-chr17-76398162-1 chr17 76398062 76398262 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022066, intron 12 of 17) intron (NM_022066, intron 12 of 17) 12954 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding Merged-chr5-154755018-1 chr5 154754918 154755118 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015315, intron 1 of 18) CpG 42116 NM_015315 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding Merged-chr19-10106280-1 chr19 10106180 10106380 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001346141) promoter-TSS (NM_001346141) 57 NM_001346140 56342 Hs.14468 NM_020230 ENSG00000130810 PPAN BXDC3|SSF|SSF-1|SSF1|SSF2 peter pan homolog (Drosophila) protein-coding Merged-chr10-24724745-1 chr10 24724645 24724845 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG-2738 -1077 NM_020824 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding Merged-chr1-203861517-1 chr1 203861417 203861617 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304464) promoter-TSS (NM_001304464) -68 NM_001304464 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding Merged-chr20-38472671-1 chr20 38472571 38472771 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282917) promoter-TSS (NM_001282917) -135 NM_001282918 57148 Hs.598850 NM_020336 ENSG00000170471 RALGAPB KIAA1219|RalGAPbeta Ral GTPase activating protein non-catalytic beta subunit protein-coding Merged-chr12-401570-1 chr12 401470 401670 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001130146) promoter-TSS (NM_001130146) -5 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 -0 coiled-coil domain containing 77 protein-coding Merged-chr10-42552836-1 chr10 42552736 42552936 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026777) promoter-TSS (NR_026777) 34 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo Merged-chr17-55607920-1 chr17 55607820 55608020 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 114944 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 -0 transmembrane protein 100 protein-coding Merged-chr19-2061565-1 chr19 2061465 2061665 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -10321 NM_017572 2872 Hs.515032 NM_017572 ENSG00000099875 MKNK2 GPRK7|MNK2 MAP kinase interacting serine/threonine kinase 2 protein-coding Merged-chr19-9835171-1 chr19 9835071 9835271 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038422) promoter-TSS (NR_038422) -36 NM_006221 5300 Hs.465849 NM_006221 ENSG00000127445 PIN1 DOD|UBL5 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 protein-coding Merged-chr10-119023416-1 chr10 119023316 119023516 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6300 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding Merged-chr1-228139911-1 chr1 228139811 228140011 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001159390) promoter-TSS (NM_001159390) -173 NM_001242839 2987 Hs.376933 NM_000858 ENSG00000143774 GUK1 GMK guanylate kinase 1 protein-coding Merged-chr2-161030702-1 chr2 161030602 161030802 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -106253 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding Merged-chr19-33078321-1 chr19 33078221 33078421 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJr|SINE|Alu -2559 NR_135270 55094 Hs.466436 NM_018025 ENSG00000076650 GPATCH1 ECGP|GPATC1 G-patch domain containing 1 protein-coding Merged-chr11-1760585-1 chr11 1760485 1760685 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001909, intron 2 of 8) intron (NM_001909, intron 2 of 8) 3407 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding Merged-chr5-132677404-1 chr5 132677304 132677504 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000589, intron 2 of 3) intron (NM_000589, intron 2 of 3) 3418 NM_000589 3565 Hs.73917 NM_000589 ENSG00000113520 IL4 BCGF-1|BCGF1|BSF-1|BSF1|IL-4 interleukin 4 protein-coding Merged-chr19-39412501-1 chr19 39412401 39412601 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022835) promoter-TSS (NM_022835) -609 NM_022835 64857 Hs.631574 NM_022835 ENSG00000090924 PLEKHG2 ARHGEF42|CLG|LDAMD pleckstrin homology and RhoGEF domain containing G2 protein-coding Merged-chr20-33811121-1 chr20 33811021 33811221 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110623) promoter-TSS (NR_110623) -22 NR_110623 101929746 Hs.504633 NR_110623 ENSG00000230753 ZNF341-AS1 -0 ZNF341 antisense RNA 1 ncRNA Merged-chr10-133259401-1 chr10 133259301 133259501 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11516 NR_108079 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG -0 MIR202 host gene ncRNA Merged-chr7-27663049-1 chr7 27662949 27663149 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152740) promoter-TSS (NM_152740) -48 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding Merged-chr16-75304963-1 chr16 75304863 75305063 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006324, intron 6 of 6) intron (NM_006324, intron 6 of 6) -36910 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding Merged-chr7-55325652-1 chr7 55325552 55325752 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -39796 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding Merged-chr22-35300166-1 chr22 35300066 35300266 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001135730, intron 1 of 13) intron (NM_001135730, intron 1 of 13) 362 NR_024195 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 -0 target of myb1 membrane trafficking protein protein-coding Merged-chr7-23014273-1 chr7 23014173 23014373 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032581) promoter-TSS (NM_032581) -122 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding Merged-chr19-38850272-1 chr19 38850172 38850372 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001533) promoter-TSS (NM_001533) -295 NM_001533 3191 Hs.644906 NM_001533 ENSG00000104824 HNRNPL HNRPL|P/OKcl.14|hnRNP-L heterogeneous nuclear ribonucleoprotein L protein-coding Merged-chrX-13432626-1 chrX 13432526 13432726 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 97385 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 -0 long intergenic non-protein coding RNA 1203 ncRNA Merged-chr6-26021471-1 chr6 26021371 26021571 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003538) promoter-TSS (NM_003538) -208 NM_003538 8359 Hs.248178 NM_003538 ENSG00000278637 HIST1H4A H4FA histone cluster 1 H4 family member a protein-coding Merged-chr4-91826388-1 chr4 91826288 91826488 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MB1|LINE|L1 450914 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 -0 lncRNA p53 regulated and ESC associated 2 ncRNA Merged-chr15-66883721-1 chr15 66883621 66883821 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 72794 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LOC102723481 -0 uncharacterized LOC102723481 ncRNA Merged-chr1-28153332-1 chr1 28153232 28153432 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001164722, intron 1 of 1) intron (NM_001164722, intron 1 of 1) 23612 NM_000952 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding Merged-chr1-27322269-1 chr1 27322169 27322369 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_037576, exon 1 of 7) non-coding (NR_037576, exon 1 of 7) 124 NR_037580 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding Merged-chr12-124838467-1 chr12 124838367 124838567 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005505, intron 1 of 12) intron (NM_005505, intron 1 of 12) 25506 NM_005505 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding Merged-chr20-50645829-1 chr20 50645729 50645929 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_111906, exon 2 of 3) non-coding (NR_111906, exon 2 of 3) 358 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 -0 uncharacterized LOC100506175 ncRNA Merged-chr9-129036460-1 chr9 129036360 129036560 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032809) promoter-TSS (NM_032809) -51 NR_138425 84895 Hs.632693 NM_032809 ENSG00000148343 MIGA2 C9orf54|FAM73B mitoguardin 2 protein-coding Merged-chr19-16185291-1 chr19 16185191 16185391 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014077) promoter-TSS (NM_014077) -110 NM_014077 26017 Hs.631614 NM_014077 ENSG00000105058 FAM32A OTAG-12|OTAG12 family with sequence similarity 32 member A protein-coding Merged-chr16-11743003-1 chr16 11742903 11743103 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324022) promoter-TSS (NM_001324022) -125 NM_001324024 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding Merged-chr11-65150788-1 chr11 65150688 65150888 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -16256 NM_172230 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding Merged-chr15-43792122-1 chr15 43792022 43792222 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199878) promoter-TSS (NM_001199878) 146 NR_037672 10169 Hs.424126 NM_005770 ENSG00000140264 SERF2 4F5REL|FAM2C|H4F5REL|HsT17089 small EDRK-rich factor 2 protein-coding Merged-chr10-101840887-1 chr10 101840787 101840987 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173191, intron 1 of 9) CpG -1033 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding Merged-chr20-17843505-1 chr20 17843405 17843605 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 119441 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA Merged-chr1-28392160-1 chr1 28392060 28392260 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001048183, intron 1 of 13) MER44C|DNA|TcMar-Tigger 22578 NM_001048183 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding Merged-chr1-234724382-1 chr1 234724282 234724482 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038856, intron 1 of 2) intron (NR_038856, intron 1 of 2) 340 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 -0 long intergenic non-protein coding RNA 1132 ncRNA Merged-chr1-116556792-1 chr1 116556692 116556892 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001144822, intron 1 of 4) MER102a|DNA|hAT-Charlie 3319 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC -0 microRNA 548ac ncRNA Merged-chr20-45336788-1 chr20 45336688 45336888 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 11636 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding Merged-chr12-103965730-1 chr12 103965630 103965830 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003211) promoter-TSS (NM_003211) -85 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding Merged-chr10-102918209-1 chr10 102918109 102918309 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_199077) promoter-TSS (NM_199077) -109 NM_017649 54805 Hs.643509 NM_017649 ENSG00000148842 CNNM2 ACDP2|HOMG6|HOMGSMR cyclin and CBS domain divalent metal cation transport mediator 2 protein-coding Merged-chr11-13668499-1 chr11 13668399 13668599 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032228) promoter-TSS (NM_032228) -160 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding Merged-chr9-95823000-1 chr9 95822900 95823100 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_023390, intron 2 of 2) intron (NR_023390, intron 2 of 2) -52618 NM_001010895 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding Merged-chr17-41689430-1 chr17 41689330 41689530 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005801, intron 1 of 3) CpG 555 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding Merged-chr12-28584123-1 chr12 28584023 28584223 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 393696 NM_001330367 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding Merged-chr3-177452073-1 chr3 177451973 177452173 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 10152 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 -0 long intergenic non-protein coding RNA 578 ncRNA Merged-chr10-6239432-1 chr10 6239332 6239532 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 36555 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding Merged-chr17-7835562-1 chr17 7835462 7835662 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -4355 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding Merged-chr18-69400324-1 chr18 69400224 69400424 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152721) promoter-TSS (NM_152721) -724 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding Merged-chr2-61538712-1 chr2 61538612 61538812 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003400) promoter-TSS (NM_003400) -429 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM1|emb|exp1 exportin 1 protein-coding Merged-chr3-113515211-1 chr3 113515111 113515311 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144718) promoter-TSS (NM_144718) -24 NM_144718 152185 Hs.477144 NM_144718 ENSG00000163611 SPICE1 CCDC52|SPICE spindle and centriole associated protein 1 protein-coding Merged-chr1-16146454-1 chr1 16146354 16146554 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329090, intron 2 of 15) intron (NM_001329090, intron 2 of 15) 9655 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr5-33807274-1 chr5 33807174 33807374 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001324512, intron 2 of 21) MIR3|SINE|MIR 84918 NM_001324512 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding Merged-chr3-185656408-1 chr3 185656308 185656508 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_138486, intron 11 of 15) intron (NR_138486, intron 11 of 15) -56844 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA Merged-chr9-121320263-1 chr9 121320163 121320363 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001127663, intron 11 of 18) intron (NM_001127663, intron 11 of 18) 20462 NM_000177 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding Merged-chr16-85037286-1 chr16 85037186 85037386 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 9535 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 -0 KIAA0513 protein-coding Merged-chr19-11095255-1 chr19 11095155 11095355 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000527, intron 1 of 17) intron (NM_000527, intron 1 of 17) 5893 NM_001195800 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding Merged-chr17-44557216-1 chr17 44557116 44557316 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001466) promoter-TSS (NM_001466) -228 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding Merged-chr22-26322702-1 chr22 26322602 26322802 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021115, intron 9 of 16) intron (NM_021115, intron 9 of 16) -106612 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 -0 aspartate beta-hydroxylase domain containing 2 protein-coding Merged-chr7-80723039-1 chr7 80722939 80723139 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 76386 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding Merged-chr17-75691479-1 chr17 75691379 75691579 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001301855, intron 4 of 11) intron (NM_001301855, intron 4 of 11) -24290 NM_001003716 9400 Hs.632229 NM_004259 ENSG00000108469 RECQL5 RECQ5 RecQ like helicase 5 protein-coding Merged-chr20-10674070-1 chr20 10673970 10674170 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000214) promoter-TSS (NM_000214) -24 NM_000214 182 Hs.224012 NM_000214 ENSG00000101384 JAG1 AGS|AGS1|AHD|AWS|CD339|HJ1|JAGL1 jagged 1 protein-coding Merged-chr6-42294970-1 chr6 42294870 42295070 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001297573, intron 4 of 17) intron (NM_001297573, intron 4 of 17) -77075 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding Merged-chr12-71754740-1 chr12 71754640 71754840 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014999) promoter-TSS (NM_014999) -123 NM_014999 23011 Hs.524590 NM_014999 ENSG00000080371 RAB21 -0 RAB21, member RAS oncogene family protein-coding Merged-chr1-16386588-1 chr1 16386488 16386688 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073500, intron 1 of 1) intron (NR_073500, intron 1 of 1) 19558 NR_073500 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding Merged-chr6-80004550-1 chr6 80004450 80004650 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003318) promoter-TSS (NM_003318) -55 NM_003318 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding Merged-chr14-54773467-1 chr14 54773367 54773567 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001161577, intron 4 of 8) intron (NM_001161577, intron 4 of 8) 18679 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding Merged-chr17-27332939-1 chr17 27332839 27333039 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 38859 NM_134265 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding Merged-chrX-16239450-1 chrX 16239350 16239550 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 71969 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 -0 MAGE family member B17 protein-coding Merged-chr15-89002484-1 chr15 89002384 89002584 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -85666 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding Merged-chr12-76158914-1 chr12 76158814 76159014 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -73881 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding Merged-chr5-132094829-1 chr5 132094729 132094929 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 21037 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 GMCSF colony stimulating factor 2 protein-coding Merged-chr18-73283946-1 chr18 73283846 73284046 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1M4b|LINE|L1 -19448 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 -0 uncharacterized LOC400655 ncRNA Merged-chr19-35931593-1 chr19 35931493 35931693 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -5527 NM_024509 79414 Hs.143792 NM_024509 ENSG00000126243 LRFN3 FIGLER1|SALM4 leucine rich repeat and fibronectin type III domain containing 3 protein-coding Merged-chr5-34008092-1 chr5 34007992 34008192 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014324) promoter-TSS (NM_014324) 23 NM_203382 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding Merged-chr11-12224783-1 chr11 12224683 12224883 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001282663, exon 13 of 28) exon (NM_001282663, exon 13 of 28) 61100 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA Merged-chr19-4182632-1 chr19 4182532 4182732 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001193285) promoter-TSS (NM_001193285) -28 NM_001321058 51548 Hs.423756 NM_016539 ENSG00000077463 SIRT6 SIR2L6 sirtuin 6 protein-coding Merged-chr11-65416565-1 chr11 65416465 65416665 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6233 NR_131012 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 (non-protein coding) ncRNA Merged-chr10-119667902-1 chr10 119667802 119668002 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 16532 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding Merged-chr11-114160165-1 chr11 114160065 114160265 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001018011, intron 3 of 6) intron (NM_001018011, intron 3 of 6) 99599 NM_001018011 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding Merged-chr21-46635605-1 chr21 46635505 46635705 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001242865) promoter-TSS (NM_001242865) 10 NM_206962 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding Merged-chr17-82297533-1 chr17 82297433 82297633 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4719 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 -0 long intergenic non-protein coding RNA 1970 ncRNA Merged-chr12-103930324-1 chr12 103930224 103930424 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027249) promoter-TSS (NR_027249) -10 NM_003299 7184 Hs.192374 NM_003299 ENSG00000166598 HSP90B1 ECGP|GP96|GRP94|HEL-S-125m|HEL35|TRA1 heat shock protein 90 beta family member 1 protein-coding Merged-chr13-30617716-1 chr13 30617616 30617816 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001313893) promoter-TSS (NM_001313893) 23 NM_005800 10208 Hs.533831 NM_005800 ENSG00000132952 USPL1 C13orf22|D13S106E|bA121O19.1 ubiquitin specific peptidase like 1 protein-coding Merged-chr16-4309999-1 chr16 4309899 4310099 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4762 NM_001318918 84662 Hs.592087 NM_032575 ENSG00000126603 GLIS2 NKL|NPHP7 GLIS family zinc finger 2 protein-coding Merged-chr11-72103382-1 chr11 72103282 72103482 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017907) promoter-TSS (NM_017907) 5 NM_017907 55004 Hs.731528 NM_017907 ENSG00000149357 LAMTOR1 C11orf59|PDRO|Ragulator1|p18|p27RF-Rho late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding Merged-chr17-13346386-1 chr17 13346286 13346486 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER74A|LTR|ERVL 197260 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA Merged-chr3-5023405-1 chr3 5023305 5023505 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -43444 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 -0 BHLHE40 antisense RNA 1 ncRNA Merged-chr1-20696987-1 chr1 20696887 20697087 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020816, intron 6 of 14) intron (NM_020816, intron 6 of 14) 21030 NM_020816 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding Merged-chr10-114624111-1 chr10 114624011 114624211 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322885, intron 1 of 20) intron (NM_001322885, intron 1 of 20) 34188 NM_002313 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding Merged-chr21-33947895-1 chr21 33947795 33947995 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134558, intron 2 of 2) intron (NR_134558, intron 2 of 2) 16681 NR_134558 100506334 Hs.532855 NM_207472 ENSG00000237945 LINC00649 -0 long intergenic non-protein coding RNA 649 ncRNA Merged-chr17-43357251-1 chr17 43357151 43357351 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic PRIMA41-int|LTR|ERV1 31647 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 -0 long intergenic non-protein coding RNA 910 ncRNA Merged-chr16-2682395-1 chr16 2682295 2682495 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018992) promoter-TSS (NM_018992) -99 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 -0 potassium channel tetramerization domain containing 5 protein-coding Merged-chr1-42846500-1 chr1 42846400 42846600 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001242739) promoter-TSS (NM_001242739) -73 NM_001242739 51058 Hs.20879 NM_015911 ENSG00000164011 ZNF691 Zfp691 zinc finger protein 691 protein-coding Merged-chr21-27423337-1 chr21 27423237 27423437 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -299042 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA Merged-chr8-38996858-1 chr8 38996758 38996958 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_078473) promoter-TSS (NM_078473) -128 NR_027638 8754 Hs.591852 NM_003816 ENSG00000168615 ADAM9 CORD9|MCMP|MDC9|Mltng ADAM metallopeptidase domain 9 protein-coding Merged-chr19-11155976-1 chr19 11155876 11156076 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317031) promoter-TSS (NM_001317031) -164 NM_182513 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24, NDC80 kinetochore complex component protein-coding Merged-chr2-63588852-1 chr2 63588752 63588952 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199111) promoter-TSS (NM_001199111) -119 NM_015910 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding Merged-chr16-86590764-1 chr16 86590664 86590864 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR 12255 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding Merged-chr10-89701543-1 chr10 89701443 89701643 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284259) promoter-TSS (NM_001284259) -47 NM_001284259 9585 Hs.240 NM_016195 ENSG00000138182 KIF20B CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 kinesin family member 20B protein-coding Merged-chr17-29294251-1 chr17 29294151 29294351 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020772) promoter-TSS (NM_020772) -103 NM_020772 57532 Hs.462598 NM_020772 ENSG00000108256 NUFIP2 182-FIP|82-FIP|FIP-82|PIG1 NUFIP2, FMR1 interacting protein 2 protein-coding Merged-chr15-59529089-1 chr15 59528989 59529189 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -82694 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3 mucin type protein-coding Merged-chr7-33813936-1 chr7 33813836 33814036 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -90975 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding Merged-chr17-68772040-1 chr17 68771940 68772140 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 143886 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 -0 long intergenic non-protein coding RNA 1482 ncRNA Merged-chr1-8629422-1 chr1 8629322 8629522 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012102, intron 3 of 23) intron (NM_012102, intron 3 of 23) -134509 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA Merged-chr22-46296841-1 chr22 46296741 46296941 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024009) promoter-TSS (NR_024009) 100 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding Merged-chr10-110305062-1 chr10 110304962 110305162 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005871) promoter-TSS (NM_005871) -113 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding Merged-chr1-113073141-1 chr1 113073041 113073241 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_103777) promoter-TSS (NR_103777) -29 NM_001312686 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding Merged-chr5-28408371-1 chr5 28408271 28408471 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER66-int|LTR|ERV1 -120706 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 -0 long intergenic non-protein coding RNA 2103 ncRNA Merged-chr6-80106521-1 chr6 80106421 80106621 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000056) promoter-TSS (NM_000056) -89 NR_134945 594 Hs.654441 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding Merged-chr17-80984948-1 chr17 80984848 80985048 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6893 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding Merged-chr10-33273512-1 chr10 33273412 33273612 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024628, intron 2 of 11) intron (NM_001024628, intron 2 of 11) 61393 NM_001330068 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding Merged-chr19-49817457-1 chr19 49817357 49817557 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030973) promoter-TSS (NM_030973) -822 NM_030973 81857 Hs.656639 NM_030973 ENSG00000104973 MED25 ACID1|ARC92|BVSYS|CMT2B2|P78|PTOV2|TCBAP0758 mediator complex subunit 25 protein-coding Merged-chr21-42002702-1 chr21 42002602 42002802 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001320731, intron 2 of 3) intron (NM_001320731, intron 2 of 3) -6492 NR_119384 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA Merged-chr8-80030303-1 chr8 80030203 80030403 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014018) promoter-TSS (NM_014018) -32 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding Merged-chr6-160030414-1 chr6 160030314 160030514 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000876, intron 7 of 47) intron (NM_000876, intron 7 of 47) -22750 NR_047511 100271873 Hs.742166 NR_047511 ENSG00000268257 AIRN AIR|IGF2R-AS|IGF2R-AS1|IGF2RAS|NCRNA00088 antisense of IGF2R non-protein coding RNA ncRNA Merged-chr10-24466481-1 chr10 24466381 24466581 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282770) promoter-TSS (NM_001282770) -24 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 SKT KIAA1217 protein-coding Merged-chr2-37084518-1 chr2 37084418 37084618 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019024) promoter-TSS (NM_019024) 67 NM_001278505 253635 Hs.595250 NM_174931 ENSG00000152133 GPATCH11 CCDC75|CENP-Y|CENPY G-patch domain containing 11 protein-coding Merged-chr14-23237924-1 chr14 23237824 23238024 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001282322) promoter-TSS (NM_001282322) 6 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding Merged-chr16-80540989-1 chr16 80540889 80541089 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_130897) promoter-TSS (NM_130897) 37 NR_130943 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding Merged-chr9-81590684-1 chr9 81590584 81590784 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005077, intron 16 of 19) intron (NM_005077, intron 16 of 19) 98851 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 transducin like enhancer of split 1 protein-coding Merged-chr17-77145979-1 chr17 77145879 77146079 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001204408, intron 5 of 19) intron (NM_001204408, intron 5 of 19) 5056 NM_003003 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding Merged-chr2-175168285-1 chr2 175168185 175168385 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256090) promoter-TSS (NM_001256090) -79 NM_001880 1386 Hs.592510 NM_001880 ENSG00000115966 ATF2 CRE-BP1|CREB-2|CREB2|HB16|TREB7 activating transcription factor 2 protein-coding Merged-chr1-43358807-1 chr1 43358707 43358907 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001255) promoter-TSS (NM_001255) -148 NM_001255 991 Hs.524947 NM_001255 ENSG00000117399 CDC20 CDC20A|bA276H19.3|p55CDC cell division cycle 20 protein-coding Merged-chr11-62840905-1 chr11 62840805 62841005 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018093) promoter-TSS (NM_018093) -749 NM_018093 54663 Hs.654620 NM_018093 ENSG00000133316 WDR74 -0 WD repeat domain 74 protein-coding Merged-chr6-4351987-1 chr6 4351887 4352087 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MamTip2|DNA|hAT-Tip100 -76015 NR_106988 102465753 NR_106988 ENSG00000280494 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA Merged-chr1-27858244-1 chr1 27858144 27858344 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14299 NM_004848 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1 thymocyte selection associated family member 2 protein-coding Merged-chr10-110211324-1 chr10 110211224 110211424 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001008541, intron 1 of 4) intron (NM_001008541, intron 1 of 4) 1093 NM_001008541 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1 dimerization protein protein-coding Merged-chr19-290233-1 chr19 290133 290333 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_177526, intron 1 of 5) intron (NM_177526, intron 1 of 5) 936 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding Merged-chr1-33633250-1 chr1 33633150 33633350 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001281956, intron 32 of 70) intron (NM_001281956, intron 32 of 70) 160619 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding Merged-chr5-41905009-1 chr5 41904909 41905109 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_175921, intron 1 of 5) intron (NM_175921, intron 1 of 5) 665 NM_175921 285636 Hs.29899 NM_175921 ENSG00000205765 C5orf51 -0 chromosome 5 open reading frame 51 protein-coding Merged-chr12-66647119-1 chr12 66647019 66647219 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021150, intron 1 of 23) intron (NM_021150, intron 1 of 23) 32026 NM_001178074 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 GRIP glutamate receptor interacting protein 1 protein-coding Merged-chr17-29639568-1 chr17 29639468 29639668 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282129, intron 14 of 15) intron (NM_001282129, intron 14 of 15) -18145 NM_032854 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 -0 coronin 6 protein-coding Merged-chr15-28977520-1 chr15 28977420 28977620 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005503, intron 1 of 13) intron (NM_005503, intron 1 of 13) 55883 NM_001130414 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding Merged-chr1-154974471-1 chr1 154974371 154974571 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001202859) promoter-TSS (NM_001202859) 12 NM_001130041 6464 Hs.433795 NM_003029 ENSG00000160691 SHC1 SHC|SHCA SHC adaptor protein 1 protein-coding Merged-chr20-19815720-1 chr20 19815620 19815820 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -70801 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding Merged-chr1-212485990-1 chr1 212485890 212486090 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 53103 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding Merged-chr19-19385738-1 chr19 19385638 19385838 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017660) promoter-TSS (NM_017660) -95 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding Merged-chr2-48314468-1 chr2 48314368 48314568 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002158) promoter-TSS (NM_002158) -188 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding Merged-chr3-129413867-1 chr3 129413767 129413967 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_207307, intron 4 of 8) intron (NM_207307, intron 4 of 8) -14428 NR_003111 132241 Hs.477537 NR_003111 ENSG00000251474 RPL32P3 -0 ribosomal protein L32 pseudogene 3 pseudo Merged-chr1-29182035-1 chr1 29181935 29182135 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005626) promoter-TSS (NM_005626) 90 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding Merged-chr1-38012658-1 chr1 38012558 38012758 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016037) promoter-TSS (NM_016037) -54 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11, small subunit processome component homolog (S. cerevisiae) protein-coding Merged-chr4-8171424-1 chr4 8171324 8171524 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16E2|LTR|ERVL -12592 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 -0 actin binding LIM protein family member 2 protein-coding Merged-chr12-75978126-1 chr12 75978026 75978226 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 53650 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding Merged-chr12-6891154-1 chr12 6891054 6891254 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -1796 NR_135083 105369632 Hs.670096 NR_135083 ENSG00000111671 LOC105369632 -0 uncharacterized LOC105369632 ncRNA Merged-chr19-48634578-1 chr19 48634478 48634678 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001352, intron 2 of 3) intron (NM_001352, intron 2 of 3) 2972 NM_001352 1628 Hs.414480 NM_001352 ENSG00000105516 DBP DABP D-box binding PAR bZIP transcription factor protein-coding Merged-chr22-40177860-1 chr22 40177760 40177960 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015088) promoter-TSS (NM_015088) -65 NM_015088 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B -0 trinucleotide repeat containing 6B protein-coding Merged-chr11-64855080-1 chr11 64854980 64855180 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282444, intron 6 of 6) MIRb|SINE|MIR -10511 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding Merged-chr1-100249855-1 chr1 100249755 100249955 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001918) promoter-TSS (NM_001918) -2 NM_001918 1629 Hs.709187 NM_001918 ENSG00000137992 DBT BCATE2|BCKAD-E2|BCKADE2|BCOADC-E2|E2|E2B dihydrolipoamide branched chain transacylase E2 protein-coding Merged-chr14-77303796-1 chr14 77303696 77303896 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013382, intron 4 of 20) L2a|LINE|L2 17086 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding Merged-chr10-71848484-1 chr10 71848384 71848584 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001042465, intron 1 of 14) MIR3|SINE|MIR 2891 NM_002778 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding Merged-chr10-77513922-1 chr10 77513822 77514022 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 123897 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding Merged-chrX-21985452-1 chrX 21985352 21985552 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004595, intron 9 of 10) intron (NM_004595, intron 9 of 10) 44879 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding Merged-chr18-12991298-1 chr18 12991198 12991398 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032142) promoter-TSS (NM_032142) -64 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding Merged-chrY-56734799-1 chrY 56734699 56734899 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic (AATGGAATGG)n|Simple_repeat|Simple_repeat -219456 NM_005840 10251 Hs.381912 NM_005840 ENSG00000168939 SPRY3 spry-3 sprouty RTK signaling antagonist 3 protein-coding Merged-chr9-111965672-1 chr9 111965572 111965772 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 33572 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA Merged-chr10-33129336-1 chr10 33129236 33129436 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -170971 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding Merged-chr2-46882163-1 chr2 46882063 46882263 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 33705 NM_139279 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding Merged-chr10-110871886-1 chr10 110871786 110871986 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199492) promoter-TSS (NM_001199492) 91 NM_001199492 27250 Hs.711490 NM_014456 ENSG00000150593 PDCD4 H731 programmed cell death 4 protein-coding Merged-chr10-4247187-1 chr10 4247087 4247287 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3275 NR_108040 100652988 Hs.433011 NR_108040 LINC00702 -0 long intergenic non-protein coding RNA 702 ncRNA Merged-chr3-133805748-1 chr3 133805648 133805848 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_021203, exon 2 of 8) 5' UTR (NM_021203, exon 2 of 8) 21715 NM_021203 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1 SRP receptor beta subunit protein-coding Merged-chr12-71663888-1 chr12 71663788 71663988 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144982) promoter-TSS (NM_144982) -9 NM_031435 83591 Hs.245798 NM_031435 ENSG00000173451 THAP2 -0 THAP domain containing 2 protein-coding Merged-chr1-222644270-1 chr1 222644170 222644370 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300867) promoter-TSS (NM_001300867) -33 NM_001324065 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA family member 3 ER export factor protein-coding Merged-chr18-76352152-1 chr18 76352052 76352252 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -139500 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 -0 uncharacterized LOC101927989 ncRNA Merged-chr7-11966531-1 chr7 11966431 11966631 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -134333 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A -0 thrombospondin type 1 domain containing 7A protein-coding Merged-chr17-60600164-1 chr17 60600064 60600264 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003620) promoter-TSS (NM_003620) -19 NM_003620 8493 Hs.286073 NM_003620 ENSG00000170836 PPM1D PP2C-DELTA|WIP1 protein phosphatase, Mg2+/Mn2+ dependent 1D protein-coding Merged-chr16-2882745-1 chr16 2882645 2882845 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001142499) promoter-TSS (NM_001142499) -450 NM_001142499 114984 Hs.534525 NM_138439 ENSG00000162076 FLYWCH2 -0 FLYWCH family member 2 protein-coding Merged-chr15-87777169-1 chr15 87777069 87777269 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 200240 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA Merged-chr17-64975585-1 chr17 64975485 64975685 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_026903) promoter-TSS (NR_026903) 0 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 -0 archaelysin family metallopeptidase 2 pseudogene 1 pseudo Merged-chr14-52552615-1 chr14 52552515 52552715 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001160047) promoter-TSS (NM_001160047) -32 NM_001160047 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding Merged-chr5-38441899-1 chr5 38441799 38441999 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152403, intron 17 of 21) intron (NM_152403, intron 17 of 21) -3577 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding Merged-chr22-30288027-1 chr22 30287927 30288127 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001037666, intron 2 of 8) intron (NM_001037666, intron 2 of 8) 1600 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 GATSL3 CASTOR1 GATS protein like 3 protein-coding Merged-chr22-25401019-1 chr22 25400919 25401119 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19442 NM_001135772 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L -0 LDL receptor related protein 5 like protein-coding Merged-chr15-74179670-1 chr15 74179570 74179770 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001142619, exon 19 of 19) 3' UTR (NM_001142619, exon 19 of 19) 5106 NM_201526 3671 Hs.699822 NM_005545 ENSG00000129009 ISLR HsT17563|Meflin immunoglobulin superfamily containing leucine rich repeat protein-coding Merged-chr2-54330855-1 chr2 54330755 54330955 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100396) promoter-TSS (NM_001100396) -79 NM_001100396 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 -0 chromosome 2 open reading frame 73 protein-coding Merged-chr1-235011969-1 chr1 235011869 235012069 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -47970 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 -0 uncharacterized LOC101927851 ncRNA Merged-chr17-64709205-1 chr17 64709105 64709305 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -46937 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 -0 SMAD specific E3 ubiquitin protein ligase 2 protein-coding Merged-chr5-174532756-1 chr5 174532656 174532856 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -191816 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding Merged-chr4-1082486-1 chr4 1082386 1082586 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_194439, intron 5 of 9) intron (NM_194439, intron 5 of 9) 31078 NM_001131034 285498 Hs.248290 NM_194439 ENSG00000178222 RNF212 ZHP3 ring finger protein 212 protein-coding Merged-chr5-59188606-1 chr5 59188506 59188706 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001165899, intron 5 of 16) intron (NM_001165899, intron 5 of 16) 87513 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding Merged-chr1-59679061-1 chr1 59678961 59679161 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278224, intron 8 of 9) intron (NM_001278224, intron 8 of 9) 54235 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 -0 microRNA 4711 ncRNA Merged-chr1-43858539-1 chr1 43858439 43858639 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_073021, intron 6 of 9) intron (NR_073021, intron 6 of 9) 19917 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA Merged-chr2-86441354-1 chr2 86441254 86441454 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146688) promoter-TSS (NM_001146688) -107 NM_001146688 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding Merged-chr5-141557808-1 chr5 141557708 141557908 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038333) promoter-TSS (NR_038333) -503 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 -0 uncharacterized LOC100505658 ncRNA Merged-chr12-56646161-1 chr12 56646061 56646261 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001686) promoter-TSS (NM_001686) -93 NM_001686 506 Hs.406510 NM_001686 ENSG00000110955 ATP5B ATPMB|ATPSB|HEL-S-271 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide protein-coding Merged-chr16-89581489-1 chr16 89581389 89581589 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014427, intron 3 of 16) L1ME2|LINE|L1 5721 NM_153636 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 -0 copine 7 protein-coding Merged-chr4-139528733-1 chr4 139528633 139528833 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_030648, intron 4 of 7) MLT1H|LTR|ERVL-MaLR 28036 NR_131339 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing lysine methyltransferase 7 protein-coding Merged-chr17-77354880-1 chr17 77354780 77354980 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006640, intron 1 of 10) MIRb|SINE|MIR -18310 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr12-49018823-1 chr12 49018723 49018923 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001206710) promoter-TSS (NM_001206710) 23 NM_002733 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding Merged-chr6-37245115-1 chr6 37245015 37245215 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001286401, intron 1 of 2) MLT1H|LTR|ERVL-MaLR 12522 NM_145316 221468 Hs.520101 NM_145316 ENSG00000172738 TMEM217 C6orf128|dJ355M6.2 transmembrane protein 217 protein-coding Merged-chr19-49877447-1 chr19 49877347 49877547 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001098632) promoter-TSS (NM_001098632) 22 NM_001168222 79735 Hs.631587 NM_024682 ENSG00000104946 TBC1D17 -0 TBC1 domain family member 17 protein-coding Merged-chr17-73228909-1 chr17 73228809 73229009 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032837, intron 1 of 2) MamRep605|LTR?|LTR? -1192 NM_001289412 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A -0 family with sequence similarity 104 member A protein-coding Merged-chr22-45212445-1 chr22 45212345 45212545 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015264) promoter-TSS (NM_015264) 21 NM_015264 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding Merged-chr2-105037987-1 chr2 105037887 105038087 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_182640) promoter-TSS (NM_182640) -38 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding Merged-chr17-41910836-1 chr17 41910736 41910936 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_198830, intron 3 of 27) intron (NM_198830, intron 3 of 27) 8183 NM_198830 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding Merged-chr2-84958397-1 chr2 84958297 84958497 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -12711 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding Merged-chr6-159727036-1 chr6 159726936 159727136 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152858) promoter-TSS (NM_152858) 38 NM_152858 9589 Hs.446091 NM_004906 ENSG00000146457 WTAP Mum2 Wilms tumor 1 associated protein protein-coding Merged-chr14-91149659-1 chr14 91149559 91149759 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001286470, intron 4 of 16) intron (NM_001286470, intron 4 of 16) 23233 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B -0 small nucleolar RNA, H/ACA box 11B snoRNA Merged-chr16-30950190-1 chr16 30950090 30950290 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152288, intron 1 of 1) MIR3|SINE|MIR 1106 NM_152288 93129 Hs.745104 NM_152288 ENSG00000175938 ORAI3 TMEM142C ORAI calcium release-activated calcium modulator 3 protein-coding Merged-chr1-23555212-1 chr1 23555112 23555312 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 4582 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3 HLH protein protein-coding Merged-chr12-53379912-1 chr12 53379812 53380012 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001251825) promoter-TSS (NM_001251825) -283 NM_138473 6667 Hs.620754 NM_003109 ENSG00000185591 SP1 -0 Sp1 transcription factor protein-coding Merged-chr4-173334458-1 chr4 173334358 173334558 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002129) promoter-TSS (NM_002129) -14 NM_002129 3148 Hs.434953 NM_002129 ENSG00000164104 HMGB2 HMG2 high mobility group box 2 protein-coding Merged-chr16-89431330-1 chr16 89431230 89431430 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_110931, exon 1 of 3) non-coding (NR_110931, exon 1 of 3) 412 NR_110932 101927817 Hs.667942 NR_110931 LOC101927817 -0 uncharacterized LOC101927817 ncRNA Merged-chr17-42436583-1 chr17 42436483 42436683 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13263 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 PTRF CAVIN|CAVIN1|CGL4|FKSG13|cavin-1 polymerase I and transcript release factor protein-coding Merged-chr11-40329350-1 chr11 40329250 40329450 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020929, intron 2 of 4) intron (NM_020929, intron 2 of 4) -36220 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding Merged-chr9-92293841-1 chr9 92293741 92293941 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002161) promoter-TSS (NM_002161) -85 NR_073446 3376 Hs.445403 NM_002161 ENSG00000196305 IARS GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 isoleucyl-tRNA synthetase protein-coding Merged-chr3-151432051-1 chr3 151431951 151432151 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_053002, intron 42 of 42) intron (NM_053002, intron 42 of 42) 8739 NM_001178145 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding Merged-chr19-45092950-1 chr19 45092850 45093050 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019121) promoter-TSS (NM_019121) -223 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding Merged-chr15-74790846-1 chr15 74790746 74790946 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004383, intron 1 of 12) L2b|LINE|L2 -2089 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 -0 microRNA 4513 ncRNA Merged-chr19-4968778-1 chr19 4968678 4968878 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015015) promoter-TSS (NM_015015) -335 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding Merged-chr19-49590208-1 chr19 49590108 49590308 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001316335, intron 6 of 6) intron (NM_001316335, intron 6 of 6) -1435 NM_020719 57479 Hs.590971 NM_020719 ENSG00000126464 PRR12 KIAA1205 proline rich 12 protein-coding Merged-chr10-37976732-1 chr10 37976632 37976832 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329659) promoter-TSS (NM_001329659) -77 NR_138067 219749 Hs.499429 NM_145011 ENSG00000175395 ZNF25 KOX19|Zfp9 zinc finger protein 25 protein-coding Merged-chr5-134554674-1 chr5 134554574 134554774 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015288, intron 4 of 10) intron (NM_015288, intron 4 of 10) 28566 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding Merged-chr6-136610428-1 chr6 136610328 136610528 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005923, intron 18 of 29) intron (NM_005923, intron 18 of 29) -18686 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 -0 uncharacterized LOC101928461 ncRNA Merged-chr22-24555249-1 chr22 24555149 24555349 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031444) promoter-TSS (NM_031444) 58 NM_001284257 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding Merged-chr22-37538980-1 chr22 37538880 37539080 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19777 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding Merged-chr12-2812877-1 chr12 2812777 2812977 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_130744, intron 1 of 12) CpG 255 NR_130744 55846 Hs.446098 NM_018463 ENSG00000111203 ITFG2 MDS028 integrin alpha FG-GAP repeat containing 2 protein-coding Merged-chr20-34363244-1 chr20 34363144 34363344 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001257138) promoter-TSS (NM_001257138) 9 NM_001324198 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding Merged-chr19-7535667-1 chr19 7535567 7535767 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001166114) promoter-TSS (NM_001166114) -36 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding Merged-chr18-9743850-1 chr18 9743750 9743950 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 35619 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding Merged-chr18-26226310-1 chr18 26226210 26226410 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001293725) promoter-TSS (NM_001293725) -573 NR_121653 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding Merged-chr12-121352390-1 chr12 121352290 121352490 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016237) promoter-TSS (NM_016237) 72 NM_016237 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding Merged-chr19-48203985-1 chr19 48203885 48204085 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 33293 NM_199341 374920 Hs.664054 NM_199341 ENSG00000185453 C19orf68 -0 chromosome 19 open reading frame 68 protein-coding Merged-chr10-114306780-1 chr10 114306680 114306880 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032550, intron 10 of 18) intron (NM_032550, intron 10 of 18) 67166 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|NET42 von Willebrand factor A domain containing 2 protein-coding Merged-chr12-53626056-1 chr12 53625956 53626156 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001206683) promoter-TSS (NM_001206683) -60 NM_001206683 11016 Hs.12286 NM_006856 ENSG00000170653 ATF7 ATFA activating transcription factor 7 protein-coding Merged-chr16-30065518-1 chr16 30065418 30065618 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001243177) promoter-TSS (NM_001243177) -155 NM_184041 226 Hs.513490 NM_000034 ENSG00000149925 ALDOA ALDA|GSD12|HEL-S-87p aldolase, fructose-bisphosphate A protein-coding Merged-chr22_KI270736v1_random-157882-1 chr22_KI270736v1_random 157782 157982 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt NA (GAATG)n|Satellite|Satellite NA NA Merged-chr17-42655743-1 chr17 42655643 42655843 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER21-int|LTR|ERVL -3505 NM_016437 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 -0 tubulin gamma 2 protein-coding Merged-chr2-135531379-1 chr2 135531279 135531479 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286568) promoter-TSS (NM_001286568) -76 NM_015361 23518 Hs.412462 NM_015361 ENSG00000048991 R3HDM1 R3HDM R3H domain containing 1 protein-coding Merged-chr10-77587198-1 chr10 77587098 77587298 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001322832, intron 1 of 27) intron (NM_001322832, intron 1 of 27) 50621 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding Merged-chr1-8005053-1 chr1 8004953 8005153 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 21280 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding Merged-chr16-2251706-1 chr16 2251606 2251806 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001178029) promoter-TSS (NM_001178029) -105 NM_001178029 1632 Hs.403436 NM_001919 ENSG00000167969 ECI1 DCI enoyl-CoA delta isomerase 1 protein-coding Merged-chr16-22190609-1 chr16 22190509 22190709 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -15662 NM_013302 29904 Hs.498892 NM_013302 ENSG00000103319 EEF2K HSU93850|eEF-2K eukaryotic elongation factor 2 kinase protein-coding Merged-chr19-1747834-1 chr19 1747734 1747934 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -5829 NM_001080488 390874 Hs.654347 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding Merged-chr5-75717625-1 chr5 75717525 75717725 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001099271) promoter-TSS (NM_001099271) -137 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding Merged-chr15-41231148-1 chr15 41231048 41231248 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286441) promoter-TSS (NM_001286441) -91 NM_007236 11261 Hs.406234 NM_007236 ENSG00000187446 CHP1 CHP|SLC9A1BP|Sid470p|p22|p24 calcineurin like EF-hand protein 1 protein-coding Merged-chr22-30207069-1 chr22 30206969 30207169 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 39782 NM_001257135 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI leukemia inhibitory factor protein-coding Merged-chr3-128123968-1 chr3 128123868 128124068 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319084) promoter-TSS (NM_001319084) -81 NM_001319084 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding Merged-chr5-72320229-1 chr5 72320129 72320329 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286748) promoter-TSS (NM_001286748) 28 NM_001286748 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding Merged-chr2-196292540-1 chr2 196292440 196292640 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020760, intron 14 of 28) intron (NM_020760, intron 14 of 28) 32516 NR_110226 101927482 Hs.191841 NR_110225 LOC101927482 -0 uncharacterized LOC101927482 ncRNA Merged-chr12-6216136-1 chr12 6216036 6216236 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001769, intron 1 of 7) intron (NM_001769, intron 1 of 7) 15820 NM_001769 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding Merged-chr1-234997442-1 chr1 234997342 234997542 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33443 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 -0 uncharacterized LOC101927851 ncRNA Merged-chr1-152048279-1 chr1 152048179 152048379 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11244 NM_005620 6282 Hs.417004 NM_005620 ENSG00000163191 S100A11 HEL-S-43|MLN70|S100C S100 calcium binding protein A11 protein-coding Merged-chr17-81043974-1 chr17 81043874 81044074 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006340, intron 1 of 14) intron (NM_006340, intron 1 of 14) 8827 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding Merged-chr6-42563918-1 chr6 42563818 42564018 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001184801) promoter-TSS (NM_001184801) -104 NM_015255 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding Merged-chr19-46222258-1 chr19 46222158 46222358 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -7494 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding Merged-chr7-2555847-1 chr7 2555747 2555947 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152743) promoter-TSS (NM_152743) -89 NM_152743 221927 Hs.520623 NM_152743 ENSG00000106009 BRAT1 BAAT1|C7orf27|RMFSL BRCA1 associated ATM activator 1 protein-coding Merged-chr1-55429486-1 chr1 55429386 55429586 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 203845 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA Merged-chr16-3283392-1 chr16 3283292 3283492 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005741) promoter-TSS (NM_005741) -95 NM_005741 10127 Hs.611475 NM_005741 ENSG00000006194 ZNF263 FPM315|ZKSCAN12|ZSCAN44 zinc finger protein 263 protein-coding Merged-chr10-3852554-1 chr10 3852454 3852654 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 18604 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LOC105376365 -0 uncharacterized LOC105376365 ncRNA Merged-chr17-80891684-1 chr17 80891584 80891784 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020761, intron 17 of 33) intron (NM_020761, intron 17 of 33) -86052 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 -0 uncharacterized LOC101928855 ncRNA Merged-chr8-133382146-1 chr8 133382046 133382246 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -84842 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding Merged-chr1-108830634-1 chr1 108830534 108830734 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_049760, exon 9 of 14) non-coding (NR_049760, exon 9 of 14) 26470 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding Merged-chr17-19362745-1 chr17 19362645 19362845 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321218) promoter-TSS (NM_001321218) -7 NM_001321218 27077 Hs.309467 NM_015681 ENSG00000108641 B9D1 B9|EPPB9|JBTS27|MKS9|MKSR1 B9 domain containing 1 protein-coding Merged-chr19-52190003-1 chr19 52189903 52190103 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_033500, exon 1 of 14) non-coding (NR_033500, exon 1 of 14) 201 NM_014225 5518 Hs.467192 NM_014225 ENSG00000105568 PPP2R1A MRD36|PP2A-Aalpha|PP2AA|PP2AAALPHA|PR65A protein phosphatase 2 scaffold subunit Aalpha protein-coding Merged-chr22-49970978-1 chr22 49970878 49971078 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 8112 NR_106879 102465493 NR_106879 ENSG00000276753 MIR6821 hsa-mir-6821 microRNA 6821 ncRNA Merged-chr11-8719569-1 chr11 8719469 8719669 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_213618, intron 4 of 19) intron (NM_213618, intron 4 of 19) 34130 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA Merged-chr16-81500951-1 chr16 81500851 81501051 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 5602 NM_030629 80790 Hs.594095 NM_030629 ENSG00000153815 CMIP TCMIP c-Maf inducing protein protein-coding Merged-chr19-38619026-1 chr19 38618926 38619126 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007181) promoter-TSS (NM_007181) -46 NM_001308393 27335 Hs.314359 NM_013234 ENSG00000178982 EIF3K ARG134|EIF3-p28|EIF3S12|HSPC029|M9|MSTP001|PLAC-24|PLAC24|PRO1474|PTD001 eukaryotic translation initiation factor 3 subunit K protein-coding Merged-chr1-26276478-1 chr1 26276378 26276578 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001319944, intron 12 of 13) intron (NM_001319944, intron 12 of 13) -3244 NM_031286 83442 Hs.109051 NM_031286 ENSG00000142669 SH3BGRL3 HEL-S-297|SH3BP-1|TIP-B1 SH3 domain binding glutamate rich protein like 3 protein-coding Merged-chr22-30592214-1 chr22 30592114 30592314 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014303) promoter-TSS (NM_014303) -274 NM_001243225 23481 Hs.517543 NM_014303 ENSG00000100029 PES1 PES pescadillo ribosomal biogenesis factor 1 protein-coding Merged-chr16-75245464-1 chr16 75245364 75245564 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001170715, intron 1 of 6) intron (NM_001170715, intron 1 of 6) 2862 NM_001170719 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1, Cas family scaffolding protein protein-coding Merged-chr2-110678173-1 chr2 110678073 110678273 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004336) promoter-TSS (NM_004336) -66 NM_001278616 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding Merged-chr3-186570496-1 chr3 186570396 186570596 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001134415) promoter-TSS (NM_001134415) 47 NM_001134415 55171 Hs.518469 NM_018138 ENSG00000113838 TBCCD1 -0 TBCC domain containing 1 protein-coding Merged-chr3-123732626-1 chr3 123732526 123732726 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_053026, intron 10 of 32) intron (NM_053026, intron 10 of 32) 42982 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 -0 MYLK antisense RNA 2 ncRNA Merged-chr2-64807572-1 chr2 64807472 64807672 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1H1|LTR|ERVL-MaLR 56059 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 -0 long intergenic non-protein coding RNA 1800 ncRNA Merged-chr16-73082738-1 chr16 73082638 73082838 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9611 NR_027756 283902 Hs.382776 NM_001101347 ENSG00000260880 HCCAT5 FJ222407|HTA hepatocellular carcinoma associated transcript 5 (non-protein coding) ncRNA Merged-chr19-4813203-1 chr19 4813103 4813303 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 18539 NM_182919 148022 Hs.29344 NM_014261 ENSG00000127666 TICAM1 IIAE6|MyD88-3|PRVTIRB|TICAM-1|TRIF toll like receptor adaptor molecule 1 protein-coding Merged-chr19-16719781-1 chr19 16719681 16719881 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001290355) promoter-TSS (NM_001290355) -195 NM_001007525 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 -0 NACHT and WD repeat domain containing 1 protein-coding Merged-chr5-169161495-1 chr5 169161395 169161595 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 102199 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA Merged-chr8-9555857-1 chr8 9555757 9555957 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003747) promoter-TSS (NM_003747) -78 NM_003747 8658 Hs.370267 NM_003747 ENSG00000173273 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase protein-coding Merged-chr21-41467523-1 chr21 41467423 41467623 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005656, intron 13 of 13) intron (NM_005656, intron 13 of 13) 35473 NM_001282920 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding Merged-chr6-18625165-1 chr6 18625065 18625265 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L3|LINE|CR1 53381 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA Merged-chr1-155262382-1 chr1 155262282 155262482 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_052837) promoter-TSS (NM_052837) 3 NM_052837 10067 Hs.200600 NM_005698 ENSG00000116521 SCAMP3 C1orf3 secretory carrier membrane protein 3 protein-coding Merged-chr9-81689860-1 chr9 81689760 81689960 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303103) promoter-TSS (NM_001303103) 147 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 -0 uncharacterized LOC101927502 ncRNA Merged-chr20-56392335-1 chr20 56392235 56392435 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324) promoter-TSS (NM_001324) 2 NM_003600 6790 Hs.250822 NM_003600 ENSG00000087586 AURKA AIK|ARK1|AURA|BTAK|PPP1R47|STK15|STK6|STK7 aurora kinase A protein-coding Merged-chr10-8542636-1 chr10 8542536 8542736 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 51755 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr19-53333702-1 chr19 53333602 53333802 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321522) promoter-TSS (NM_001321522) -17 NM_001321522 91664 Hs.720672 NM_138374 ENSG00000213799 ZNF845 -0 zinc finger protein 845 protein-coding Merged-chr6-30617427-1 chr6 30617327 30617527 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014046).5 promoter-TSS (NM_014046).5 -120 NR_072994 5514 Hs.106019 NM_002714 ENSG00000204569 PPP1R10 CAT53|FB19|PNUTS|PP1R10|R111|p99 protein phosphatase 1 regulatory subunit 10 protein-coding Merged-chr9-76867011-1 chr9 76866911 76867111 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_131751, intron 1 of 15) L2a|LINE|L2 39076 NM_015225 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr10-35409426-1 chr10 35409326 35409526 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 72552 NM_001282853 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding Merged-chr17-16380731-1 chr17 16380631 16380831 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018955) promoter-TSS (NM_018955) -62 NM_001281716 7314 Hs.356190 NM_018955 ENSG00000170315 UBB HEL-S-50 ubiquitin B protein-coding Merged-chr17-75904988-1 chr17 75904888 75905088 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_032478, exon 1 of 9) 5' UTR (NM_032478, exon 1 of 9) 112 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding Merged-chr8-22227991-1 chr8 22227891 22228091 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014759, intron 2 of 4) MIRb|SINE|MIR 4347 NM_001099335 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding Merged-chr6-30571324-1 chr6 30571224 30571424 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001025091) promoter-TSS (NM_001025091) -69 NM_001025091 23 Hs.655285 NM_001090 ENSG00000204574 ABCF1 ABC27|ABC50 ATP binding cassette subfamily F member 1 protein-coding Merged-chr5-146182744-1 chr5 146182644 146182844 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317965) promoter-TSS (NM_001317965) 43 NM_016460 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding Merged-chr19-1260967-1 chr19 1260867 1261067 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -8299 NM_001300829 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding Merged-chr17-82529088-1 chr17 82528988 82529188 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 9370 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding Merged-chr4-119300710-1 chr4 119300610 119300810 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001170330, exon 2 of 3) exon (NM_001170330, exon 2 of 3) 103 NM_001001701 401152 Hs.173705 NM_001001701 ENSG00000164096 C4orf3 HCVFTP1 chromosome 4 open reading frame 3 protein-coding Merged-chr1-212608459-1 chr1 212608359 212608559 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001674) promoter-TSS (NM_001674) -169 NM_001674 467 Hs.460 NM_001674 ENSG00000162772 ATF3 -0 activating transcription factor 3 protein-coding Merged-chr1-15337846-1 chr1 15337746 15337946 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_052929, intron 14 of 30) MIRc|SINE|MIR -72049 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding Merged-chr22-37571434-1 chr22 37571334 37571534 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006498, intron 2 of 3) intron (NM_006498, intron 2 of 3) 8583 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding Merged-chr15-65409453-1 chr15 65409353 65409553 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020962, intron 3 of 19) intron (NM_020962, intron 3 of 19) 13619 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding Merged-chr8-26458064-1 chr8 26457964 26458164 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 55903 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 paraneoplastic Ma antigen 2 protein-coding Merged-chr4-150280737-1 chr4 150280637 150280837 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006726, intron 56 of 57) intron (NM_006726, intron 56 of 57) 202463 NR_036614 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding Merged-chr3-187403862-1 chr3 187403762 187403962 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 35482 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding Merged-chr19-58381216-1 chr19 58381116 58381316 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138466) promoter-TSS (NM_138466) -194 NM_138466 116412 Hs.222236 NM_138466 ENSG00000152475 ZNF837 -0 zinc finger protein 837 protein-coding Merged-chr16-21599457-1 chr16 21599357 21599557 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110930) promoter-TSS (NR_110930) -19 NM_001077180 51108 Hs.279583 NM_016025 ENSG00000197006 METTL9 CGI-81|DREV|DREV1|PAP1 methyltransferase like 9 protein-coding Merged-chr4-82374067-1 chr4 82373967 82374167 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031369) promoter-TSS (NM_031369) -71 NM_002138 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding Merged-chr9-125143600-1 chr9 125143500 125143700 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001144877) promoter-TSS (NM_001144877) -41 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding Merged-chr3-111978951-1 chr3 111978851 111979051 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001272069) promoter-TSS (NM_001272069) 75 NR_073570 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 -0 abhydrolase domain containing 10 protein-coding Merged-chr17-61871578-1 chr17 61871478 61871678 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330417, intron 20 of 24) L2a|LINE|L2 -8019 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding Merged-chr5-132426645-1 chr5 132426545 132426745 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_045116, intron 2 of 3) intron (NR_045116, intron 2 of 3) 15872 NR_045116 441108 Hs.658288 NM_001013717 ENSG00000197536 C5orf56 -0 chromosome 5 open reading frame 56 ncRNA Merged-chr7-35801020-1 chr7 35800920 35801120 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120511) promoter-TSS (NR_120511) 34 NM_001011553 989 Hs.191346 NM_001788 ENSG00000122545 SEPT7 CDC10|CDC3|NBLA02942|SEPT7A septin 7 protein-coding Merged-chr1-212285245-1 chr1 212285145 212285345 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125984) promoter-TSS (NR_125984) -224 NR_125984 101929541 Hs.632493 NR_125982 ENSG00000226251 LOC101929541 -0 uncharacterized LOC101929541 ncRNA Merged-chr1-44986604-1 chr1 44986504 44986704 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001261418, exon 1 of 11) 5' UTR (NM_001261418, exon 1 of 11) 118 NM_020365 8891 Hs.533549 NM_020365 ENSG00000070785 EIF2B3 EIF-2B|EIF2Bgamma eukaryotic translation initiation factor 2B subunit gamma protein-coding Merged-chr19-46788661-1 chr19 46788561 46788761 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005628) promoter-TSS (NM_005628) -76 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding Merged-chr12-68365452-1 chr12 68365352 68365552 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33071 NM_020128 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 -0 Mdm1 nuclear protein protein-coding Merged-chr14-77028882-1 chr14 77028782 77028982 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024496) promoter-TSS (NM_024496) -183 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1 interferon regulatory factor 2 binding protein like protein-coding Merged-chr22-44448488-1 chr22 44448388 44448588 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 5161 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LINC01656 -0 long intergenic non-protein coding RNA 1656 ncRNA Merged-chr4-143513374-1 chr4 143513274 143513474 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003601) promoter-TSS (NM_003601) -89 NM_003601 8467 Hs.558422 NM_003601 ENSG00000153147 SMARCA5 ISWI|SNF2H|WCRF135|hISWI|hSNF2H SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein-coding Merged-chr9-101398669-1 chr9 101398569 101398769 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278232) promoter-TSS (NM_001278232) -32 NM_019051 54534 Hs.288224 NM_019051 ENSG00000136897 MRPL50 MRP-L50 mitochondrial ribosomal protein L50 protein-coding Merged-chr11-15708214-1 chr11 15708114 15708314 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 64329 NM_001293172 102724957 Hs.512245 NM_001293172 ENSG00000254695 LOC102724957 -0 uncharacterized LOC102724957 protein-coding Merged-chr22-18077908-1 chr22 18077808 18078008 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199319) promoter-TSS (NM_001199319) -12 NM_017929 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding Merged-chr7-28686060-1 chr7 28685960 28686160 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001011666) promoter-TSS (NM_001011666) 79 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5 cAMP responsive element binding protein 5 protein-coding Merged-chr15-92734028-1 chr15 92733928 92734128 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -61456 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 -0 ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo Merged-chr2-229489156-1 chr2 229489056 229489256 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139072, intron 6 of 12) intron (NM_139072, intron 6 of 12) -217815 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding Merged-chr17-76540990-1 chr17 76540890 76541090 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001077620, intron 2 of 4) intron (NM_001077620, intron 2 of 4) 951 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 progressive rod-cone degeneration protein-coding Merged-chr7-7968660-1 chr7 7968560 7968760 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110018) promoter-TSS (NR_110018) -83 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding Merged-chr17-66275782-1 chr17 66275682 66275882 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -27026 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PRKACA protein kinase C alpha protein-coding Merged-chr3-131503013-1 chr3 131502913 131503113 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007208) promoter-TSS (NM_007208) 3 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding Merged-chr17-47189482-1 chr17 47189382 47189582 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001293091) promoter-TSS (NM_001293091) -170 NM_001256 996 Hs.463295 NM_001256 ENSG00000004897 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding Merged-chr14-69263479-1 chr14 69263379 69263579 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 3515 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding Merged-chr17-19753232-1 chr17 19753132 19753332 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4799 NM_000691 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding Merged-chr11-20112629-1 chr11 20112529 20112729 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001111019, intron 26 of 27) intron (NM_001111019, intron 26 of 27) 47695 NM_001029865 120237 Hs.558604 NM_001029865 ENSG00000109851 DBX1 -0 developing brain homeobox 1 protein-coding Merged-chr22-46035897-1 chr22 46035797 46035997 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 8971 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 -0 long intergenic non-protein coding RNA 899 ncRNA Merged-chr19-4791512-1 chr19 4791412 4791612 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018708) promoter-TSS (NM_018708) -204 NM_018708 55527 Hs.515082 NM_018708 ENSG00000141965 FEM1A EPRAP fem-1 homolog A protein-coding Merged-chr1-168643336-1 chr1 168643236 168643436 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 66863 NM_002995 6375 Hs.546295 NM_002995 ENSG00000143184 XCL1 ATAC|LPTN|LTN|SCM-1|SCM-1a|SCM1|SCM1A|SCYC1 X-C motif chemokine ligand 1 protein-coding Merged-chr5-149939273-1 chr5 149939173 149939373 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000440, intron 1 of 21) intron (NM_000440, intron 1 of 21) 5520 NM_000440 5145 Hs.567314 NM_000440 ENSG00000132915 PDE6A CGPR-A|PDEA|RP43 phosphodiesterase 6A protein-coding Merged-chr5-27608156-1 chr5 27608056 27608256 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIRb|SINE|MIR 135864 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 LINC01021 -0 long intergenic non-protein coding RNA 1021 ncRNA Merged-chr12-75635869-1 chr12 75635769 75635969 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR107_Mam|LTR|LTR -124231 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding Merged-chr17-58304491-1 chr17 58304391 58304591 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024418, intron 29 of 30) intron (NM_024418, intron 29 of 30) -20959 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1 antisense RNA 1 ncRNA Merged-chr1-7471032-1 chr1 7470932 7471132 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015215, intron 6 of 22) intron (NM_015215, intron 6 of 22) -300237 NM_004781 9341 Hs.66708 NM_004781 ENSG00000049245 VAMP3 CEB vesicle associated membrane protein 3 protein-coding Merged-chr21-42009992-1 chr21 42009892 42010092 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_119384, intron 1 of 1) CpG 395 NM_001098402 49854 Hs.434947 NM_020727 ENSG00000173276 ZBTB21 ZNF295 zinc finger and BTB domain containing 21 protein-coding Merged-chr17-48908331-1 chr17 48908231 48908431 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_023079) promoter-TSS (NM_023079) -38 NM_023079 65264 Hs.514297 NM_023079 ENSG00000159202 UBE2Z HOYS7|USE1 ubiquitin conjugating enzyme E2 Z protein-coding Merged-chr3-141367439-1 chr3 141367339 141367539 0 4.860000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 43226 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding Merged-chr1-47314301-2 chr1 47314132 47314470 0 4.855000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003035) promoter-TSS (NM_003035) -154 NM_001282937 6491 Hs.525198 NM_003035 ENSG00000123473 STIL MCPH7|SIL SCL/TAL1 interrupting locus protein-coding Merged-chr5-59194085-2 chr5 59193961 59194209 0 4.855000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001165899, intron 4 of 16) intron (NM_001165899, intron 4 of 16) 82034 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding Merged-chr22-41286442-2 chr22 41286335 41286549 0 4.855000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002883) promoter-TSS (NM_002883) -191 NM_002883 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding Merged-chr3-167734989-2 chr3 167734870 167735108 0 4.855000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_007217) promoter-TSS (NM_007217) -126 NM_145859 11235 Hs.478150 NM_007217 ENSG00000114209 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding Merged-chr19-2151809-2 chr19 2151666 2151953 0 4.855000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001261826) promoter-TSS (NM_001261826) -252 NM_001261826 8943 Hs.512815 NM_003938 ENSG00000065000 AP3D1 ADTD|HPS10|hBLVR adaptor related protein complex 3 delta 1 subunit protein-coding Merged-chr1-12619090-1 chr1 12618990 12619190 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1359 NM_004753 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding Merged-chr6-159789846-1 chr6 159789746 159789946 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_030752) promoter-TSS (NM_030752) -21 NR_134860 29074 Hs.416998 NM_014161 ENSG00000112110 MRPL18 HSPC071|L18mt|MRP-L18 mitochondrial ribosomal protein L18 protein-coding Merged-chr19-52048849-1 chr19 52048749 52048949 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001322284) promoter-TSS (NM_001322284) -209 NM_001322284 9668 Hs.655934 NM_014650 ENSG00000256087 ZNF432 -0 zinc finger protein 432 protein-coding Merged-chr19-38850525-1 chr19 38850425 38850625 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001533) promoter-TSS (NM_001533) -548 NM_001533 3191 Hs.644906 NM_001533 ENSG00000104824 HNRNPL HNRPL|P/OKcl.14|hnRNP-L heterogeneous nuclear ribonucleoprotein L protein-coding Merged-chr17-81329640-1 chr17 81329540 81329740 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_178520, intron 1 of 2) intron (NM_178520, intron 1 of 2) 1034 NM_178520 284186 Hs.364191 NM_178520 ENSG00000185332 TMEM105 -0 transmembrane protein 105 protein-coding Merged-chr17-45124210-1 chr17 45124110 45124310 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_133373, intron 1 of 14) intron (NM_133373, intron 1 of 14) 8323 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding Merged-chr8-128900943-1 chr8 128900843 128901043 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -336264 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA Merged-chr3-146308399-1 chr3 146308299 146308499 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR|SINE|MIR -57220 NM_001128306 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding Merged-chr1-19260812-1 chr1 19260712 19260912 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt TTS (NM_016183) TTS (NM_016183) 9231 NM_016183 51154 Hs.463797 NM_016183 ENSG00000053372 MRTO4 C1orf33|MRT4|dJ657E11.4 MRT4 homolog, ribosome maturation factor protein-coding Merged-chr7-74098201-1 chr7 74098101 74098301 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001204426, intron 3 of 14) MER21C|LTR|ERVL 5045 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding Merged-chr17-75680029-1 chr17 75679929 75680129 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_013260, intron 3 of 10) intron (NM_013260, intron 3 of 10) -12840 NM_001003716 9400 Hs.632229 NM_004259 ENSG00000108469 RECQL5 RECQ5 RecQ like helicase 5 protein-coding Merged-chr21-38289897-1 chr21 38289797 38289997 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_170737, intron 1 of 2) intron (NM_170737, intron 1 of 2) 17477 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding Merged-chr9-124771665-1 chr9 124771565 124771765 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001278546) promoter-TSS (NM_001278546) -355 NM_033334 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding Merged-chr10-77393085-1 chr10 77392985 77393185 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 42213 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 -0 KCNMA1 antisense RNA 3 ncRNA Merged-chr3-194598991-1 chr3 194598891 194599091 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_138399, intron 9 of 10) intron (NM_138399, intron 9 of 10) 14723 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 -0 TMEM44 antisense RNA 1 ncRNA Merged-chr17-40954178-1 chr17 40954078 40954278 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 12714 NM_213656 390792 Hs.28467 NM_213656 ENSG00000196859 KRT39 CK-39|K39|KA35 keratin 39 protein-coding Merged-chr6-56938854-1 chr6 56938754 56938954 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001144769, intron 2 of 96) MLT1H|LTR|ERVL-MaLR 15774 NM_001144769 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding Merged-chr1-226778777-1 chr1 226778677 226778877 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIRc|SINE|MIR -39602 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding Merged-chr9-104873343-1 chr9 104873243 104873443 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005502, intron 5 of 49) intron (NM_005502, intron 5 of 49) 54903 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding Merged-chr12-120292192-1 chr12 120292092 120292292 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_003137) promoter-TSS (NR_003137) -289 NR_003137 26834 NR_003137 ENSG00000202538 RNU4-2 RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c RNA, U4 small nuclear 2 snRNA Merged-chr12-19031147-1 chr12 19031047 19031247 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -98545 NM_019012 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding Merged-chr1-20496371-1 chr1 20496271 20496471 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -10136 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding Merged-chr1-203674325-1 chr1 203674225 203674425 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001684, intron 1 of 20) intron (NM_001684, intron 1 of 20) 47538 NM_001684 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding Merged-chr12-96219884-1 chr12 96219784 96219984 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005230, intron 1 of 4) intron (NM_005230, intron 1 of 4) 25502 NM_005230 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ELK3, ETS transcription factor protein-coding Merged-chr12-110450427-1 chr12 110450327 110450527 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001278556) promoter-TSS (NM_001278556) -16 NM_001287222 10094 Hs.524741 NM_001278556 ENSG00000111229 ARPC3 ARC21|p21-Arc actin related protein 2/3 complex subunit 3 protein-coding Merged-chr2-169962066-1 chr2 169961966 169962166 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_172070, intron 24 of 38) MLT1F|LTR|ERVL-MaLR 134558 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 (putative) protein-coding Merged-chr5-28627373-1 chr5 28627273 28627473 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MLT1F2|LTR|ERVL-MaLR -299497 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 -0 lymphocyte-specific protein 1 pseudogene 3 pseudo Merged-chr18-72375834-1 chr18 72375734 72375934 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic ERVL-E-int|LTR|ERVL 168654 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 -0 cerebellin 2 precursor protein-coding Merged-chr1-24413745-1 chr1 24413645 24413845 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001199013) promoter-TSS (NM_001199013) 27 NM_001199013 90529 Hs.403187 NM_178122 ENSG00000001460 STPG1 C1orf201|MAPO2 sperm tail PG-rich repeat containing 1 protein-coding Merged-chr14-49975450-1 chr14 49975350 49975550 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 9051 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA Merged-chr5-35436116-1 chr5 35436016 35436216 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER57E1|LTR|ERV1 -181771 NM_144722 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding Merged-chr9-85940947-1 chr9 85940847 85941047 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001321881) promoter-TSS (NM_001321881) -195 NM_001321881 60560 Hs.436098 NM_021929 ENSG00000135040 NAA35 EGAP|MAK10|MAK10P|bA379P1.1 N(alpha)-acetyltransferase 35 NatC auxiliary subunit protein-coding Merged-chrX-16160898-1 chrX 16160798 16160998 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -6583 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 -0 MAGE family member B17 protein-coding Merged-chr1-94160962-1 chr1 94160862 94161062 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -39813 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding Merged-chr1-198657682-1 chr1 198657582 198657782 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001267798, intron 2 of 3) UCON26|Unknown|Unknown 18714 NM_002838 5788 Hs.654514 NM_002838 ENSG00000081237 PTPRC B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 protein tyrosine phosphatase, receptor type C protein-coding Merged-chr3-120160247-1 chr3 120160147 120160347 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -65830 NM_002093 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B -0 glycogen synthase kinase 3 beta protein-coding Merged-chr8-38528222-1 chr8 38528122 38528322 0 4.850000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_207412, intron 1 of 2) intron (NM_207412, intron 1 of 2) 440 NM_207412 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 -0 chromosome 8 open reading frame 86 protein-coding Merged-chr2-19611943-2 chr2 19611831 19612055 0 4.840000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -253332 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transciption factor 1 protein-coding Merged-chr17-71072019-2 chr17 71071883 71072156 0 4.840000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR 130160 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility candidate 17 (non-protein coding) ncRNA Merged-chr12-120234954-2 chr12 120234785 120235124 0 4.840000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001080855, intron 1 of 11) intron (NM_001080855, intron 1 of 11) 15207 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN -0 paxillin protein-coding Merged-chr6-10452073-2 chr6 10451962 10452184 0 4.840000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_132993, intron 2 of 3) intron (NR_132993, intron 2 of 3) 12356 NR_049872 100846998 NR_049872 ENSG00000263705 MIR5689 -0 microRNA 5689 ncRNA Merged-chr12-53451949-2 chr12 53451824 53452074 0 4.840000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001098620) promoter-TSS (NM_001098620) -153 NM_001128914 5094 Hs.546271 NM_005016 ENSG00000197111 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding Merged-chr14-22929526-2 chr14 22929400 22929652 0 4.835000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001039619) promoter-TSS (NM_001039619) 59 NM_001282956 10419 Hs.367854 NM_006109 ENSG00000100462 PRMT5 HRMT1L5|IBP72|JBP1|SKB1|SKB1Hs protein arginine methyltransferase 5 protein-coding Merged-chr11-10735940-2 chr11 10735783 10736098 0 4.825000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -15047 NM_014633 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding Merged-chr17-40418051-2 chr17 40417921 40418181 0 4.825000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001067) promoter-TSS (NM_001067) -101 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A topoisomerase (DNA) II alpha protein-coding Merged-chr1-112396100-2 chr1 112395999 112396202 0 4.710000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_018704) promoter-TSS (NM_018704) -78 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL -0 CTTNBP2 N-terminal like protein-coding Merged-chr1-17190060-2 chr1 17189960 17190160 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -15066 NM_013358 29943 Hs.412941 NM_013358 ENSG00000142623 PADI1 HPAD10|PAD1|PDI|PDI1 peptidyl arginine deiminase 1 protein-coding Merged-chr19-48619358-2 chr19 48619212 48619505 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_073022) promoter-TSS (NR_073022) 60 NM_001270490 6141 Hs.515517 NM_000979 ENSG00000063177 RPL18 L18 ribosomal protein L18 protein-coding Merged-chr22-20569098-2 chr22 20568985 20569211 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001293234, intron 8 of 16) intron (NM_001293234, intron 8 of 16) 61050 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding Merged-chr8-109539620-2 chr8 109539504 109539736 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004215) promoter-TSS (NM_004215) -80 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated, antigen, 9 protein-coding Merged-chrX-2707504-2 chrX 2707396 2707612 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001122898, intron 1 of 8) intron (NM_001122898, intron 1 of 8) 16371 NM_001321370 4267 Hs.653349 NM_002414 ENSG00000002586 CD99 HBA71|MIC2|MIC2X|MIC2Y|MSK5X CD99 molecule protein-coding Merged-chr6-30769753-2 chr6 30769587 30769920 0 4.690000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_138037, intron 1 of 3) intron (NR_138037, intron 1 of 3) 2928 NR_138037 105375013 Hs.348584 NR_138037 ENSG00000228022 HCG20 NCRNA00149 HLA complex group 20 (non-protein coding) ncRNA Merged-chr14-59188590-2 chr14 59188445 59188735 0 4.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001270520) promoter-TSS (NM_001270520) -73 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 -0 dishevelled associated activator of morphogenesis 1 protein-coding Merged-chr1-28885159-2 chr1 28885027 28885292 0 4.680000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1932 NM_001166005 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding Merged-chr9-114587651-2 chr9 114587523 114587779 0 4.675000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004888) promoter-TSS (NM_004888) -63 NM_004888 9550 Hs.388654 NM_004888 ENSG00000136888 ATP6V1G1 ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10 ATPase H+ transporting V1 subunit G1 protein-coding Merged-chr19-1103918-1 chr19 1103818 1104018 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002085) promoter-TSS (NM_002085) -8 NM_001039847 2879 Hs.433951 NM_002085 ENSG00000167468 GPX4 GPx-4|GSHPx-4|MCSP|PHGPx|SMDS|snGPx|snPHGPx glutathione peroxidase 4 protein-coding Merged-chr20-63682591-1 chr20 63682491 63682691 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001283010, intron 13 of 33) intron (NM_001283010, intron 13 of 33) -14060 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding Merged-chr1-27542737-1 chr1 27542637 27542837 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -52550 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WAS protein family member 2 protein-coding Merged-chr4-26197495-1 chr4 26197395 26197595 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -122215 NM_203283 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding Merged-chr1-235883713-1 chr1 235883613 235883813 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_102436) promoter-TSS (NR_102436) -5 NM_001301365 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding Merged-chr3-124281979-1 chr3 124281879 124282079 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001024660, intron 5 of 59) intron (NM_001024660, intron 5 of 59) -92353 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA Merged-chr2-25997973-1 chr2 25997873 25998073 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15399 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C -0 kinesin family member 3C protein-coding Merged-chr4-99950465-1 chr4 99950365 99950565 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002106) promoter-TSS (NM_002106) -29 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 -0 uncharacterized LOC256880 ncRNA Merged-chr9-109316371-1 chr9 109316271 109316471 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_018424, intron 1 of 15) L3b|LINE|CR1 4593 NM_018424 54566 Hs.591901 NM_018424 ENSG00000095203 EPB41L4B CG1|EHM2 erythrocyte membrane protein band 4.1 like 4B protein-coding Merged-chr6-105587588-1 chr6 105587488 105587688 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -184464 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding Merged-chr2-102227907-1 chr2 102227807 102228007 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003854, intron 9 of 11) intron (NM_003854, intron 9 of 11) 40934 NM_003854 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding Merged-chr4-13989032-1 chr4 13988932 13989132 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -122936 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 -0 long intergenic non-protein coding RNA 1085 ncRNA Merged-chr11-45859840-1 chr11 45859740 45859940 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021117, intron 3 of 11) intron (NM_021117, intron 3 of 11) 12434 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian clock 2 protein-coding Merged-chr11-64566671-1 chr11 64566571 64566771 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001307985, intron 6 of 7) Tigger18a|DNA|TcMar-Tigger 11070 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding Merged-chr16-19523892-1 chr16 19523792 19523992 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199022) promoter-TSS (NM_001199022) 35 NM_001199022 9738 Hs.279912 NM_014711 ENSG00000103540 CCP110 CP110|Cep110 centriolar coiled-coil protein 110 protein-coding Merged-chr1-32817526-1 chr1 32817426 32817626 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256121) promoter-TSS (NM_001256121) 8 NM_022753 64766 Hs.440880 NM_022753 ENSG00000116497 S100PBP S100PBPR S100P binding protein protein-coding Merged-chr17-61338093-1 chr17 61337993 61338193 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001099432, intron 23 of 24) L2b|LINE|L2 29611 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 -0 uncharacterized LOC101927855 ncRNA Merged-chr1-153958733-1 chr1 153958633 153958833 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181715) promoter-TSS (NM_181715) -77 NM_181715 200186 Hs.406392 NM_181715 ENSG00000160741 CRTC2 TORC-2|TORC2 CREB regulated transcription coactivator 2 protein-coding Merged-chr9-121902731-1 chr9 121902631 121902831 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 159946 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding Merged-chr3-98901888-1 chr3 98901788 98901988 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_080927) promoter-TSS (NM_080927) -199 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding Merged-chr6-33410450-1 chr6 33410350 33410550 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027692) promoter-TSS (NR_027692) -546 NM_002636 5252 Hs.166204 NM_002636 ENSG00000112511 PHF1 MTF2L2|PCL1|PHF2|TDRD19C|hPHF1 PHD finger protein 1 protein-coding Merged-chr1-201462092-1 chr1 201461992 201462192 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 7079 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding Merged-chr2-219543914-1 chr2 219543814 219544014 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195731) promoter-TSS (NM_001195731) -92 NM_001005209 130612 Hs.446664 NM_001005209 ENSG00000188760 TMEM198 TMEM198A transmembrane protein 198 protein-coding Merged-chr14-72894317-1 chr14 72894217 72894417 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001280542) promoter-TSS (NM_001280542) -201 NM_012074 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding Merged-chr2-165470061-1 chr2 165469961 165470161 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001172173, intron 1 of 6) intron (NM_001172173, intron 1 of 6) 414 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding Merged-chr5-61332158-1 chr5 61332058 61332258 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020928) promoter-TSS (NM_020928) -115 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND zinc finger SWIM-type containing 6 protein-coding Merged-chr6-11921150-1 chr6 11921050 11921250 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 80094 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 -0 uncharacterized LOC101928253 ncRNA Merged-chr2-173590438-1 chr2 173590338 173590538 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 235605 NM_145810 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding Merged-chr17-19378381-1 chr17 19378281 19378481 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002749) promoter-TSS (NM_002749) -80 NM_139034 5598 Hs.150136 NM_002749 ENSG00000166484 MAPK7 BMK1|ERK4|ERK5|PRKM7 mitogen-activated protein kinase 7 protein-coding Merged-chr1-235070239-1 chr1 235070139 235070339 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_027454) promoter-TSS (NR_027454) -421 NR_027454 731656 Hs.702477 NR_027454 LINC01348 -0 long intergenic non-protein coding RNA 1348 ncRNA Merged-chr17-57890652-1 chr17 57890552 57890752 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 12737 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 -0 CUE domain containing 1 protein-coding Merged-chrX-24054353-1 chrX 24054253 24054453 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001415) promoter-TSS (NM_001415) -595 NM_001415 1968 Hs.539684 NM_001415 ENSG00000130741 EIF2S3 EIF2|EIF2G|EIF2gamma|MRXSBRK|eIF-2gA eukaryotic translation initiation factor 2 subunit gamma protein-coding Merged-chr17-14738454-1 chr17 14738354 14738554 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -276351 NR_135638 101928475 Hs.638944 NR_135638 ENSG00000232058 LOC101928475 -0 uncharacterized LOC101928475 ncRNA Merged-chr3-184561458-1 chr3 184561358 184561558 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004443) promoter-TSS (NM_004443) -341 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding Merged-chr7-44634039-1 chr7 44633939 44634139 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001003941, intron 2 of 8) MLT1H2|LTR|ERVL-MaLR 27517 NM_002541 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding Merged-chr15-78507453-1 chr15 78507353 78507553 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001013619) promoter-TSS (NM_001013619) -111 NM_001083612 123688 Hs.307962 NM_001013619 ENSG00000188266 HYKK AGPHD1 hydroxylysine kinase protein-coding Merged-chr16-68288049-1 chr16 68287949 68288149 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003983, intron 4 of 10) intron (NM_003983, intron 4 of 10) 22916 NM_032178 84138 Hs.729520 NM_032178 ENSG00000103061 SLC7A6OS -0 solute carrier family 7 member 6 opposite strand protein-coding Merged-chr16-11797441-1 chr16 11797341 11797541 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014153) promoter-TSS (NM_014153) -183 NM_014153 29066 Hs.371856 NM_014153 ENSG00000122299 ZC3H7A HSPC055|ZC3H7|ZC3HDC7 zinc finger CCCH-type containing 7A protein-coding Merged-chr1-23559532-1 chr1 23559432 23559632 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_002167, exon 1 of 3) 5' UTR (NM_002167, exon 1 of 3) 262 NM_002167 3399 Hs.76884 NM_002167 ENSG00000117318 ID3 HEIR-1|bHLHb25 inhibitor of DNA binding 3 HLH protein protein-coding Merged-chr18-62715245-1 chr18 62715145 62715345 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_194449) promoter-TSS (NM_194449) -194 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding Merged-chr12-24227217-1 chr12 24227117 24227317 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_120473, exon 2 of 2) non-coding (NR_120473, exon 2 of 2) 3946 NR_120473 101928471 Hs.569156 NR_120472 ENSG00000256120 LOC101928471 -0 uncharacterized LOC101928471 ncRNA Merged-chr2-10405674-1 chr2 10405574 10405774 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001258359, intron 2 of 4) intron (NM_001258359, intron 2 of 4) 36910 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding Merged-chr16-81096511-1 chr16 81096411 81096611 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004483) promoter-TSS (NM_004483) -136 NM_004483 2653 Hs.546256 NM_004483 ENSG00000140905 GCSH GCE|NKH glycine cleavage system protein H protein-coding Merged-chr5-135140973-1 chr5 135140873 135141073 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001277348, intron 2 of 5) intron (NM_001277348, intron 2 of 5) -100926 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 CTC-276P9.1|Epist C5orf66 antisense RNA 1 ncRNA Merged-chr15-62758383-1 chr15 62758283 62758483 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015059, intron 34 of 55) intron (NM_015059, intron 34 of 55) -65574 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA Merged-chr17-75877305-1 chr17 75877205 75877405 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033452, intron 1 of 5) intron (NM_033452, intron 1 of 5) 1270 NM_033452 91107 Hs.293660 NM_033452 ENSG00000132481 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding Merged-chr12-83682670-1 chr12 83682570 83682770 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA7|LINE|L1 995515 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Merged-chr7-6349038-1 chr7 6348938 6349138 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001037163) promoter-TSS (NM_001037163) -79 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000178397 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding Merged-chr5-77133231-1 chr5 77133131 77133331 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_024398, intron 3 of 3) MLT1H2|LTR|ERVL-MaLR -45985 NM_032367 84327 Hs.584988 NM_032367 ENSG00000132846 ZBED3 -0 zinc finger BED-type containing 3 protein-coding Merged-chr10-70296732-1 chr10 70296632 70296832 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -13038 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding Merged-chr17-83109896-1 chr17 83109796 83109996 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 30205 NM_001004431 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL -0 meteorin like, glial cell differentiation regulator protein-coding Merged-chr7-74657578-1 chr7 74657478 74657678 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_033000) promoter-TSS (NM_033000) -87 NM_032999 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding Merged-chr5-172361867-1 chr5 172361767 172361967 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001017995, intron 7 of 12) intron (NM_001017995, intron 7 of 12) 76270 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 -0 uncharacterized LOC100288254 ncRNA Merged-chr2-201781104-1 chr2 201781004 201781204 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020919) promoter-TSS (NM_020919) 68 NM_001135745 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ ALS2, alsin Rho guanine nucleotide exchange factor protein-coding Merged-chr5-163460466-1 chr5 163460366 163460566 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001142556) promoter-TSS (NM_001142556) -45 NM_012485 3161 Hs.740467 NM_012484 ENSG00000072571 HMMR CD168|IHABP|RHAMM hyaluronan mediated motility receptor protein-coding Merged-chr10-110651698-1 chr10 110651598 110651798 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001134363, intron 1 of 13) intron (NM_001134363, intron 1 of 13) 7301 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 -0 RNA binding motif protein 20 protein-coding Merged-chr17-75238874-1 chr17 75238774 75238974 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001172704, intron 14 of 15) intron (NM_001172704, intron 14 of 15) 22787 NM_014001 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 -0 golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding Merged-chr16-80938132-1 chr16 80938032 80938232 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1I|LTR|ERVL-MaLR -45536 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 PRCAT47 -0 prostate cancer-associated 47 ncRNA Merged-chr17-82536349-1 chr17 82536249 82536449 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004514, intron 1 of 8) L1M4|LINE|L1 16631 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding Merged-chr18-77108545-1 chr18 77108445 77108645 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 24273 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP -0 myelin basic protein protein-coding Merged-chr8-144901479-1 chr8 144901379 144901579 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001109689) promoter-TSS (NM_001109689) -18 NM_021061 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding Merged-chr7-16645722-1 chr7 16645622 16645822 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_020319) promoter-TSS (NM_020319) 95 NM_020319 57037 Hs.157378 NM_020319 ENSG00000106524 ANKMY2 ZMYND20 ankyrin repeat and MYND domain containing 2 protein-coding Merged-chr17-62093562-1 chr17 62093462 62093662 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -28280 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding Merged-chr10-17025714-1 chr10 17025614 17025814 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001081, intron 27 of 66) intron (NM_001081, intron 27 of 66) 104103 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding Merged-chr18-51197907-1 chr18 51197807 51198007 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016626) promoter-TSS (NM_016626) -226 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding Merged-chrX-15493282-1 chrX 15493182 15493382 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001018109, exon 1 of 10) 5' UTR (NM_001018109, exon 1 of 10) 306 NM_003662 8544 Hs.495728 NM_003662 ENSG00000087842 PIR -0 pirin protein-coding Merged-chr17-7307413-1 chr17 7307313 7307513 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001970) promoter-TSS (NM_001970) -124 NM_001970 1984 Hs.534314 NM_001970 ENSG00000132507 EIF5A EIF-5A|EIF5A1|eIF5AI eukaryotic translation initiation factor 5A protein-coding Merged-chr5-39775548-1 chr5 39775448 39775648 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 255117 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 -0 long intergenic non-protein coding RNA 2104 ncRNA Merged-chr6-36027532-1 chr6 36027432 36027632 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001315) promoter-TSS (NM_001315) -145 NM_001315 1432 Hs.485233 NM_001315 ENSG00000112062 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding Merged-chr19-53431928-1 chr19 53431828 53432028 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_003148) promoter-TSS (NR_003148) -46 NM_001289951 388561 Hs.433293 NM_001008401 ENSG00000160336 ZNF761 ZNF468 zinc finger protein 761 protein-coding Merged-chr1-32394547-1 chr1 32394447 32394647 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001143888) promoter-TSS (NM_001143888) -86 NM_018045 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 -0 BSD domain containing 1 protein-coding Merged-chr17-44345176-1 chr17 44345076 44345276 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002087) promoter-TSS (NM_002087) 90 NM_002087 2896 Hs.514220 NM_002087 ENSG00000030582 GRN CLN11|GEP|GP88|PCDGF|PEPI|PGRN granulin precursor protein-coding Merged-chr5-88141531-1 chr5 88141431 88141631 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 127348 NM_001289008 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding Merged-chr7-76380030-1 chr7 76379930 76380130 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -17494 NM_007155 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding Merged-chr10-102646124-1 chr10 102646024 102646224 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001345950, intron 1 of 4) intron (NM_001345950, intron 1 of 4) 1629 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding Merged-chr1-64343712-1 chr1 64343612 64343812 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -127081 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 -0 cache domain containing 1 protein-coding Merged-chr20-23350688-1 chr20 23350588 23350788 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013248) promoter-TSS (NM_013248) -48 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding Merged-chr3-121835189-1 chr3 121835089 121835289 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001023570) promoter-TSS (NM_001023570) 9 NM_001320041 55840 Hs.477325 NM_018456 ENSG00000145088 EAF2 BM040|TRAITS|U19 ELL associated factor 2 protein-coding Merged-chr14-73458782-1 chr14 73458682 73458882 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320114) promoter-TSS (NM_001320114) -202 NM_001320114 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB, endocytic adaptor protein protein-coding Merged-chr19-11375036-1 chr19 11374936 11375136 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_175871, intron 1 of 1) CpG 329 NM_175871 126074 Hs.631619 NM_175871 ENSG00000173928 SWSAP1 C19orf39|SWS1AP1|ZSWIM7AP1 SWIM-type zinc finger 7 associated protein 1 protein-coding Merged-chr2-61764361-1 chr2 61764261 61764461 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 89782 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161 member A protein-coding Merged-chr2-230908837-1 chr2 230908737 230908937 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_005683, exon 2 of 2) 3' UTR (NM_005683, exon 2 of 2) 16389 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding Merged-chr16-15482487-1 chr16 15482387 15482587 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033201, intron 1 of 5) intron (NM_033201, intron 1 of 5) -19779 NM_001142469 89927 Hs.401798 NM_033201 ENSG00000166780 C16orf45 MINP chromosome 16 open reading frame 45 protein-coding Merged-chr17-1253869-1 chr17 1253769 1253969 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -16695 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding Merged-chr9-128818435-1 chr9 128818335 128818535 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004435) promoter-TSS (NM_004435) -65 NM_004435 2021 Hs.745161 NM_004435 ENSG00000167136 ENDOG -0 endonuclease G protein-coding Merged-chr12-26274870-1 chr12 26274770 26274970 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 79297 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding Merged-chr7-6453916-1 chr7 6453816 6454016 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER77|LTR|ERVL -5904 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding Merged-chr12-109573641-1 chr12 109573541 109573741 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000431) promoter-TSS (NM_000431) -54 NM_000431 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding Merged-chr19-18557775-1 chr19 18557675 18557875 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001171948) promoter-TSS (NM_001171948) 13 NM_001171948 79036 Hs.714548 NM_024069 ENSG00000105700 KXD1 BORCS4|C19orf50|KXDL|MST096|MSTP096 KxDL motif containing 1 protein-coding Merged-chr10-117461969-1 chr10 117461869 117462069 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -80476 NM_001165924 2018 Hs.202095 NM_004098 ENSG00000170370 EMX2 -0 empty spiracles homeobox 2 protein-coding Merged-chr22-43067542-1 chr22 43067442 43067642 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012263, intron 5 of 10) intron (NM_012263, intron 5 of 10) 21886 NR_027779 25809 Hs.660298 NM_012263 ENSG00000100271 TTLL1 C22orf7|HS323M22B tubulin tyrosine ligase like 1 protein-coding Merged-chr2-27380866-1 chr2 27380766 27380966 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001201459) promoter-TSS (NM_001201459) -122 NM_144631 130557 Hs.515872 NM_144631 ENSG00000163795 ZNF513 HMFT0656|RP58 zinc finger protein 513 protein-coding Merged-chr1-205376911-1 chr1 205376811 205377011 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038425, intron 1 of 3) AluJr|SINE|Alu 3659 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 -0 LEMD1 antisense RNA 1 ncRNA Merged-chr21-42496325-1 chr21 42496225 42496425 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135518) promoter-TSS (NR_135518) 29 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head 1 homolog protein-coding Merged-chr1-93670324-1 chr1 93670224 93670424 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001261408, intron 4 of 13) intron (NM_001261408, intron 4 of 13) 11046 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding Merged-chr16-8797736-1 chr16 8797636 8797836 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015421) promoter-TSS (NM_015421) -77 NM_000303 5373 Hs.625732 NM_000303 ENSG00000140650 PMM2 CDG1|CDG1a|CDGS|PMI|PMI1|PMM 2 phosphomannomutase 2 protein-coding Merged-chr18-80108917-1 chr18 80108817 80109017 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014913) promoter-TSS (NM_014913) -114 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding Merged-chr6-36912842-1 chr6 36912742 36912942 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152734, intron 3 of 7) intron (NM_152734, intron 3 of 7) 26978 NM_001286635 221477 Hs.433381 NM_152734 ENSG00000198663 C6orf89 BRAP chromosome 6 open reading frame 89 protein-coding Merged-chr19-39403942-1 chr19 39403842 39404042 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -2905 NM_003407 7538 Hs.534052 NM_003407 ENSG00000128016 ZFP36 G0S24|GOS24|NUP475|RNF162A|TIS11|TTP|zfp-36 ZFP36 ring finger protein protein-coding Merged-chr1-151057908-1 chr1 151057808 151058008 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001038707, intron 1 of 5) intron (NM_001038707, intron 1 of 5) 1741 NM_020239 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding Merged-chr4-154165420-1 chr4 154165320 154165520 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 225877 NM_017639 54798 Hs.655664 NM_017639 ENSG00000197410 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding Merged-chr8-127911440-1 chr8 127911340 127911540 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 37283 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 -0 transmembrane protein 75 ncRNA Merged-chr16-3401106-1 chr16 3401006 3401206 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003450) promoter-TSS (NM_003450) -41 NM_001324345 54925 Hs.592078 NM_017810 ENSG00000140987 ZSCAN32 HCCS-5|ZNF434 zinc finger and SCAN domain containing 32 protein-coding Merged-chr17-38454683-1 chr17 38454583 38454783 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001199417, intron 1 of 23) intron (NM_001199417, intron 1 of 23) 26207 NM_001199417 57636 Hs.374446 NM_020876 ENSG00000275832 ARHGAP23 -0 Rho GTPase activating protein 23 protein-coding Merged-chr5-38854306-1 chr5 38854206 38854406 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003999, intron 1 of 17) intron (NM_003999, intron 1 of 17) 8307 NM_001323504 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding Merged-chr15-69160428-1 chr15 69160328 69160528 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001324093) promoter-TSS (NM_001324093) -169 NM_015554 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding Merged-chr9-115944613-1 chr9 115944513 115944713 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -19515 NR_024032 58483 Hs.23367 NM_021208 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA Merged-chr8-66667295-1 chr8 66667195 66667395 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001204173) promoter-TSS (NM_001204173) -78 NM_025054 80124 Hs.632066 NM_025054 ENSG00000175073 VCPIP1 DUBA3|VCIP135 valosin containing protein interacting protein 1 protein-coding Merged-chr1-85611961-1 chr1 85611861 85612061 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 31200 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CYR61 CCN1|GIG1|IGFBP10 cysteine rich angiogenic inducer 61 protein-coding Merged-chr15-45279295-1 chr15 45279195 45279395 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120335) promoter-TSS (NR_120335) -73 NR_120335 101928414 NR_120335 ENSG00000259520 LOC101928414 -0 uncharacterized LOC101928414 ncRNA Merged-chr10-99906689-1 chr10 99906589 99906789 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318327, intron 3 of 13) MLT1F|LTR|ERVL-MaLR 7403 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|TUBA dynamin binding protein protein-coding Merged-chr5-173315615-1 chr5 173315515 173315715 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_003714, exon 4 of 4) 3' UTR (NM_003714, exon 4 of 4) 13888 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding Merged-chr3-193593082-1 chr3 193592982 193593182 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015560) promoter-TSS (NM_015560) -62 NM_130835 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1, mitochondrial dynamin like GTPase protein-coding Merged-chr16-15888668-1 chr16 15888568 15888768 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_130755) promoter-TSS (NR_130755) -19 NR_130755 123811 Hs.514179 NM_144600 ENSG00000133393 FOPNL C16orf63|FOR20|PHSECRG2 FGFR1OP N-terminal like protein-coding Merged-chr3-196503822-1 chr3 196503722 196503922 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152617) promoter-TSS (NM_152617) -54 NM_152617 165918 Hs.250648 NM_152617 ENSG00000163961 RNF168 hRNF168 ring finger protein 168 protein-coding Merged-chr11-67239908-1 chr11 67239808 67240008 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256405) promoter-TSS (NM_001256405) -127 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding Merged-chr8-37144777-1 chr8 37144677 37144877 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 349136 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 -0 long intergenic non-protein coding RNA 1605 ncRNA Merged-chr4-26860626-1 chr4 26860526 26860726 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134673) promoter-TSS (NR_134673) -27 NR_134673 105374546 Hs.548859 NR_134673 LOC105374546 -0 uncharacterized LOC105374546 ncRNA Merged-chr2-219362779-1 chr2 219362679 219362879 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1F|LTR|ERVL-MaLR 24583 NM_001319118 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding Merged-chr9-122093459-1 chr9 122093359 122093559 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001139442, exon 1 of 9) 5' UTR (NM_001139442, exon 1 of 9) 147 NM_001139442 158135 Hs.438937 NM_194252 ENSG00000175764 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase like 11 protein-coding Merged-chr11-126269033-1 chr11 126268933 126269133 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001177842) promoter-TSS (NM_001177842) -7 NM_017547 55572 Hs.317190 NM_017547 ENSG00000110074 FOXRED1 FP634|H17 FAD dependent oxidoreductase domain containing 1 protein-coding Merged-chr12-110468274-1 chr12 110468174 110468374 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001164373) promoter-TSS (NM_001164373) 10 NM_001164373 51184 Hs.634680 NM_016301 ENSG00000111231 GPN3 ATPBD1C GPN-loop GTPase 3 protein-coding Merged-chr14-92794154-1 chr14 92794054 92794254 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005113) promoter-TSS (NM_005113) -77 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding Merged-chr5-148913292-1 chr5 148913192 148913392 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 86699 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding Merged-chr5-43105817-1 chr5 43105717 43105917 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15026 NM_001330707 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding Merged-chr5-32278623-1 chr5 32278523 32278723 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001294344, intron 1 of 13) MER5A|DNA|hAT-Charlie 34385 NM_001040446 54545 Hs.481836 NM_019061 ENSG00000150712 MTMR12 3-PAP|PIP3AP myotubularin related protein 12 protein-coding Merged-chr19-10836308-1 chr19 10836208 10836408 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_104015) promoter-TSS (NR_104015) -1 NM_006858 11018 Hs.211463 NM_006858 ENSG00000099203 TMED1 IL1RL1LG|Il1rl1l|Tp24|p24g1 transmembrane p24 trafficking protein 1 protein-coding Merged-chr8-40172907-1 chr8 40172807 40173007 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 19439 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding Merged-chr17-65023051-1 chr17 65022951 65023151 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001282425, intron 2 of 3) Cheshire|DNA|hAT-Charlie 32723 NM_001282425 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding Merged-chr3-150348731-1 chr3 150348631 150348831 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24984 NR_110187 101928022 Hs.555199 NR_110186 LINC01214 -0 long intergenic non-protein coding RNA 1214 ncRNA Merged-chr5-103850175-1 chr5 103850075 103850275 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -287374 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 -0 nudix hydrolase 12 protein-coding Merged-chr8-19291588-1 chr8 19291488 19291688 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -21982 NM_022071 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding Merged-chr3-186617154-1 chr3 186617054 186617254 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001622, intron 3 of 6) intron (NM_001622, intron 3 of 6) 4093 NM_001622 197 Hs.324746 NM_001622 ENSG00000145192 AHSG A2HS|AHS|FETUA|HSGA alpha 2-HS glycoprotein protein-coding Merged-chr1-28648393-1 chr1 28648293 28648493 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_004407) promoter-TSS (NR_004407) -207 NR_004407 26824 Hs.640266 NR_004407 ENSG00000270103 RNU11 RNU11-1|U11 RNA, U11 small nuclear snRNA Merged-chr6-31620583-1 chr6 31620483 31620683 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004638).2 promoter-TSS (NM_004638).2 -90 NM_004638 7916 Hs.123239 NM_004638 ENSG00000204469 PRRC2A BAT2|D6S51|D6S51E|G2 proline rich coiled-coil 2A protein-coding Merged-chr16-30923380-1 chr16 30923280 30923480 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024348) promoter-TSS (NR_024348) -111 NR_024348 283932 Hs.711535 NM_175901 ENSG00000260852 FBXL19-AS1 NCRNA00095 FBXL19 antisense RNA 1 (head to head) ncRNA Merged-chr17-82450831-1 chr17 82450731 82450931 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033046) promoter-TSS (NM_001033046) 0 NM_001100407 79415 Hs.163113 NM_001033046 ENSG00000178927 C17orf62 -0 chromosome 17 open reading frame 62 protein-coding Merged-chr12-49323156-1 chr12 49323056 49323256 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100620) promoter-TSS (NM_001100620) -32 NM_001278324 10024 Hs.524399 NM_005480 ENSG00000135451 TROAP TASTIN trophinin associated protein protein-coding Merged-chr19-46784963-1 chr19 46784863 46785063 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145145) promoter-TSS (NM_001145145) -86 NM_001145145 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding Merged-chr7-56051495-1 chr7 56051395 56051595 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004577) promoter-TSS (NM_004577) 80 NM_004577 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding Merged-chr18-76399055-1 chr18 76398955 76399155 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -92597 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 -0 uncharacterized LOC101927989 ncRNA Merged-chr4-8515434-1 chr4 8515334 8515534 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -64803 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 -0 G protein-coupled receptor 78 protein-coding Merged-chr11-10809024-1 chr11 10808924 10809124 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120540) promoter-TSS (NR_120540) 11 NM_001418 1982 Hs.183684 NM_001418 ENSG00000110321 EIF4G2 AAG1|DAP5|NAT1|P97 eukaryotic translation initiation factor 4 gamma 2 protein-coding Merged-chr19-47349190-1 chr19 47349090 47349290 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014681) promoter-TSS (NM_014681) -91 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding Merged-chr17-41793363-1 chr17 41793263 41793463 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6651 NM_021991 3728 Hs.514174 NM_002230 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding Merged-chr17-17435586-1 chr17 17435486 17435686 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -41400 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding Merged-chr15-50885309-1 chr15 50885209 50885409 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -23363 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 epsilon 1 subunit protein-coding Merged-chr19-46856211-1 chr19 46856111 46856311 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -5216 NM_004069 1175 Hs.119591 NM_004069 ENSG00000042753 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor related protein complex 2 sigma 1 subunit protein-coding Merged-chr1-159780861-1 chr1 159780761 159780961 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319658) promoter-TSS (NM_001319658) -85 NM_017823 54935 Hs.425801 NM_017823 ENSG00000158716 DUSP23 DUSP25|LDP-3|MOSP|VHZ dual specificity phosphatase 23 protein-coding Merged-chr11-12694091-1 chr11 12693991 12694191 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 19669 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding Merged-chr14-69005934-1 chr14 69005834 69006034 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 26252 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA Merged-chr2-26018276-1 chr2 26018176 26018376 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15584 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 -0 RAB10, member RAS oncogene family protein-coding Merged-chr5-37890063-1 chr5 37889963 37890163 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 16638 NM_001278094 100861519 Hs.536820 NM_001278094 ENSG00000248587 GDNF-AS1 GDNFOS GDNF antisense RNA 1 (head to head) protein-coding Merged-chr10-58435396-1 chr10 58435296 58435496 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 50253 NM_001270782 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding Merged-chr17-80254915-1 chr17 80254815 80255015 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1ME3G|LINE|L1 -5946 NM_001256071 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding Merged-chr8-26382929-1 chr8 26382829 26383029 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004331) promoter-TSS (NM_004331) 24 NR_144550 157489 Hs.586388 NR_144550 SDAD1P1 -0 SDA1 domain containing 1 pseudogene 1 pseudo Merged-chr2-45936422-1 chr2 45936322 45936522 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 284518 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding Merged-chr17-72422956-1 chr17 72422856 72423056 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_137281, intron 3 of 4) intron (NR_137281, intron 3 of 4) 80145 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 -0 long intergenic non-protein coding RNA 2003 ncRNA Merged-chr17-76498336-1 chr17 76498236 76498436 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024599, intron 1 of 18) intron (NM_024599, intron 1 of 18) 3091 NM_024599 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding Merged-chr19-2627648-1 chr19 2627548 2627748 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -3067 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA Merged-chr3-156681148-1 chr3 156681048 156681248 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001184718, intron 2 of 5) intron (NM_001184718, intron 2 of 5) 4484 NM_001184718 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding Merged-chr16-89700279-1 chr16 89700179 89700379 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152339, intron 2 of 2) intron (NM_152339, intron 2 of 2) 1434 NM_152339 124044 Hs.374556 NM_152339 ENSG00000158792 SPATA2L C16orf76|tamo spermatogenesis associated 2 like protein-coding Merged-chr17-78592510-1 chr17 78592410 78592610 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15116 NM_173628 8632 Hs.375975 NM_003727 ENSG00000187775 DNAH17 DNAHL1|DNEL2 dynein axonemal heavy chain 17 protein-coding Merged-chr21-33380660-1 chr21 33380560 33380760 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -22236 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding Merged-chr11-10490736-1 chr11 10490636 10490836 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001025389, intron 6 of 14) intron (NM_001025389, intron 6 of 14) 17590 NR_039705 100616263 NR_039705 ENSG00000255823 MIR4485 mir-4485 microRNA 4485 ncRNA Merged-chr5-141412933-1 chr5 141412833 141413033 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032090) promoter-TSS (NM_032090) -243 NM_032090 56106 Hs.368160 NM_018913 ENSG00000253846 PCDHGA10 PCDH-GAMMA-A10 protocadherin gamma subfamily A, 10 protein-coding Merged-chr3-141368448-1 chr3 141368348 141368548 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 44235 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding Merged-chr1-16145386-1 chr1 16145286 16145486 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329090, intron 2 of 15) intron (NM_001329090, intron 2 of 15) 10723 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Merged-chr10-102245456-1 chr10 102245356 102245556 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004193) promoter-TSS (NM_004193) -42 NM_004193 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding Merged-chr17-83083606-1 chr17 83083506 83083706 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001004431, intron 1 of 3) intron (NM_001004431, intron 1 of 3) 3915 NM_001004431 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL -0 meteorin like, glial cell differentiation regulator protein-coding Merged-chr2-214810074-1 chr2 214809974 214810174 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_104212) promoter-TSS (NR_104212) -155 NR_110292 101928103 Hs.665619 NR_110292 ENSG00000229267 LOC101928103 -0 uncharacterized LOC101928103 ncRNA Merged-chr18-3448220-1 chr18 3448120 3448320 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173207, intron 1 of 2) CpG 634 NM_173207 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding Merged-chr18-50287915-1 chr18 50287815 50288015 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_014593, exon 1 of 15) 5' UTR (NM_014593, exon 1 of 15) 407 NM_001101654 30827 Hs.180933 NM_014593 ENSG00000154832 CXXC1 2410002I16Rik|5830420C16Rik|CFP1|CGBP|HsT2645|PCCX1|PHF18|SPP1|ZCGPC1|hCGBP CXXC finger protein 1 protein-coding Merged-chr11-62727567-1 chr11 62727467 62727667 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001079559) promoter-TSS (NM_001079559) -182 NM_001079559 221092 Hs.657058 NM_001079559 ENSG00000214753 HNRNPUL2 HNRPUL2|SAF-A2 heterogeneous nuclear ribonucleoprotein U like 2 protein-coding Merged-chr12-1690891-1 chr12 1690791 1690991 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024551) promoter-TSS (NM_024551) -190 NM_024551 79602 Hs.371642 NM_024551 ENSG00000006831 ADIPOR2 ACDCR2|PAQR2 adiponectin receptor 2 protein-coding Merged-chr5-151771921-1 chr5 151771821 151772021 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_132346) promoter-TSS (NR_132346) 6 NM_198395 10146 Hs.3353 NM_005754 ENSG00000145907 G3BP1 G3BP|HDH-VIII G3BP stress granule assembly factor 1 protein-coding Merged-chr17-68381147-1 chr17 68381047 68381247 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001267727, intron 8 of 11) intron (NM_001267727, intron 8 of 11) -32476 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding Merged-chr15-85858964-1 chr15 85858864 85859064 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 33329 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP -0 microRNA 548ap ncRNA Merged-chr11-62539378-1 chr11 62539278 62539478 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001620, intron 1 of 4) intron (NM_001620, intron 1 of 4) 6309 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding Merged-chr4-71126918-1 chr4 71126818 71127018 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Arthur1|DNA|hAT-Tip100 -60368 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding Merged-chr17-996814-1 chr17 996714 996914 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013337).3 promoter-TSS (NM_013337).3 -79 NM_013337 29928 Hs.745034 NM_013337 ENSG00000177370 TIMM22 TEX4|TIM22 translocase of inner mitochondrial membrane 22 protein-coding Merged-chr15-51121299-1 chr15 51121199 51121399 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -16023 NM_207381 388121 Hs.306343 NM_207381 ENSG00000183578 TNFAIP8L3 TIPE3 TNF alpha induced protein 8 like 3 protein-coding Merged-chr19-9819174-1 chr19 9819074 9819274 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001316940) promoter-TSS (NM_001316940) -71 NM_001316938 54850 Hs.12439 NM_017703 ENSG00000127452 FBXL12 Fbl12 F-box and leucine rich repeat protein 12 protein-coding Merged-chr16-19595625-1 chr16 19595525 19595725 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020314, intron 8 of 30) intron (NM_020314, intron 8 of 30) 40210 NM_020314 57020 Hs.654964 NM_020314 ENSG00000103544 C16orf62 -0 chromosome 16 open reading frame 62 protein-coding Merged-chr2-17977277-1 chr2 17977177 17977377 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 98620 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding Merged-chr5-88661090-1 chr5 88660990 88661190 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_015436, intron 3 of 4) CpG 5849 NR_030741 407047 NR_030741 ENSG00000245526 MIR9-2 MIRN9-2|hsa-mir-9-2|miRNA9-2|mir-9-2 microRNA 9-2 ncRNA Merged-chr18-3652952-1 chr18 3652852 3653052 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001003809, intron 4 of 9) intron (NM_001003809, intron 4 of 9) 49215 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 -0 DLGAP1 antisense RNA 2 ncRNA Merged-chr11-35364201-1 chr11 35364101 35364301 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 55357 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding Merged-chr17-60506482-1 chr17 60506382 60506582 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006380, intron 1 of 12) L2b|LINE|L2 19758 NM_006380 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding Merged-chr2-65227742-1 chr2 65227642 65227842 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001005386) promoter-TSS (NM_001005386) 47 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 ARP2 actin related protein 2 homolog protein-coding Merged-chr1-108746579-1 chr1 108746479 108746679 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007269) promoter-TSS (NM_007269) -84 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding Merged-chr14-77033466-1 chr14 77033366 77033566 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -4767 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1 interferon regulatory factor 2 binding protein like protein-coding Merged-chr7-47458300-1 chr7 47458200 47458400 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 123844 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Merged-chr17-3660020-1 chr17 3659920 3660120 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001031681, intron 11 of 12) intron (NM_001031681, intron 11 of 12) 8659 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding Merged-chr3-189937892-1 chr3 189937792 189937992 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 107970 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA Merged-chr11-66268494-1 chr11 66268394 66268594 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030981) promoter-TSS (NM_030981) -91 NM_030981 81876 Hs.300816 NM_030981 ENSG00000174903 RAB1B -0 RAB1B, member RAS oncogene family protein-coding Merged-chr17-8138977-1 chr17 8138877 8139077 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 6094 NR_106943 102465532 NR_106943 ENSG00000179094 MIR6883 hsa-mir-6883 microRNA 6883 ncRNA Merged-chr8-127507567-1 chr8 127507467 127507667 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER58A|DNA|hAT-Charlie -25428 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLo-1|LINC00860 cancer susceptibility candidate 8 (non-protein coding) ncRNA Merged-chr10-60778360-1 chr10 60778260 60778460 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001170407) promoter-TSS (NM_001170407) 29 NM_001320918 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding Merged-chr20-43752547-1 chr20 43752447 43752647 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25545 NM_176791 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding Merged-chr13-113449293-1 chr13 113449193 113449393 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_199162) promoter-TSS (NM_199162) -151 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding Merged-chr10-84139434-1 chr10 84139334 84139534 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014394) promoter-TSS (NM_014394) 5 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding Merged-chr2-237227836-1 chr2 237227736 237227936 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR16E2|LTR|ERVL 142395 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding Merged-chr7-4631800-1 chr7 4631700 4631900 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -50499 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding Merged-chr2-101002244-1 chr2 101002144 101002344 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000993) promoter-TSS (NM_000993) 15 NM_001098577 6160 Hs.469473 NM_000993 ENSG00000071082 RPL31 L31 ribosomal protein L31 protein-coding Merged-chr16-74696031-1 chr16 74695931 74696131 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001142497, intron 1 of 5) MLT1J2|LTR|ERVL-MaLR 5117 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding Merged-chr6-158026113-1 chr6 158026013 158026213 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001178088, intron 1 of 25) MIRc|SINE|MIR 9065 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding Merged-chr2-152717587-1 chr2 152717487 152717687 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017892) promoter-TSS (NM_017892) -126 NM_017892 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding Merged-chr12-25829454-1 chr12 25829354 25829554 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 44625 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 -0 microRNA 4302 ncRNA Merged-chr17-59566188-1 chr17 59566088 59566288 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024612, intron 1 of 17) intron (NM_024612, intron 1 of 17) 663 NM_024612 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding Merged-chr4-75724511-1 chr4 75724411 75724611 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001290049) promoter-TSS (NM_001290049) -11 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding Merged-chr2-10660208-1 chr2 10660108 10660308 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_048552, intron 8 of 19) intron (NR_048552, intron 8 of 19) 29779 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding Merged-chr19-4471967-1 chr19 4471867 4472067 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001001520) promoter-TSS (NM_001001520) -229 NM_001001520 84717 Hs.43071 NM_032631 ENSG00000167674 HDGFRP2 HDGF-2|HDGF2|HRP-2 hepatoma-derived growth factor-related protein 2 protein-coding Merged-chr1-50960450-1 chr1 50960350 50960550 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007051) promoter-TSS (NM_007051) -186 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding Merged-chr2-219498757-1 chr2 219498657 219498857 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013335) promoter-TSS (NM_013335) -108 NM_013335 29926 Hs.27059 NM_013335 ENSG00000144591 GMPPA AAMR GDP-mannose pyrophosphorylase A protein-coding Merged-chr9-115591760-1 chr9 115591660 115591860 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 152479 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 -0 uncharacterized LOC101928775 ncRNA Merged-chr1-209784714-1 chr1 209784614 209784814 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152485) promoter-TSS (NM_152485) 16 NM_152485 148304 Hs.497642 NM_152485 ENSG00000162757 C1orf74 URLC4 chromosome 1 open reading frame 74 protein-coding Merged-chr3-126859094-1 chr3 126858994 126859194 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032343, intron 5 of 7) L2b|LINE|L2 -129500 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding Merged-chr15-77420374-1 chr15 77420274 77420474 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304505) promoter-TSS (NM_001304505) -270 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding Merged-chr12-55927130-1 chr12 55927030 55927230 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001143853) promoter-TSS (NM_001143853) -5 NM_001143853 84305 Hs.505687 NM_032345 ENSG00000170473 PYM1 PYM|WIBG PYM homolog 1 exon junction complex associated factor protein-coding Merged-chr8-127860003-1 chr8 127859903 127860103 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 64041 NR_031609 100302185 NR_031609 ENSG00000249859 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA Merged-chr8-143430921-1 chr8 143430821 143431021 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_201589) promoter-TSS (NM_201589) -489 NM_201589 389692 Hs.521914 NM_201589 ENSG00000182759 MAFA RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding Merged-chr15-75023544-1 chr15 75023444 75023644 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001301101) promoter-TSS (NM_001301101) -11 NM_001301102 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding Merged-chr21-35051600-1 chr21 35051500 35051700 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2302 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding Merged-chr19-38403002-1 chr19 38402902 38403102 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_174905) promoter-TSS (NM_174905) -133 NM_174905 147965 Hs.355162 NM_174905 ENSG00000130244 FAM98C -0 family with sequence similarity 98 member C protein-coding Merged-chr17-18315233-1 chr17 18315133 18315333 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320759) promoter-TSS (NM_001320759) -47 NM_144775 140775 Hs.592944 NM_144775 ENSG00000176994 SMCR8 -0 Smith-Magenis syndrome chromosome region, candidate 8 protein-coding Merged-chr6-151068300-1 chr6 151068200 151068400 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001242768, intron 26 of 27) MamRTE1|LINE|RTE-BovB 160157 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 -0 uncharacterized LOC102723831 ncRNA Merged-chr11-18396156-1 chr11 18396056 18396256 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001165414) promoter-TSS (NM_001165414) -110 NM_001165414 3939 Hs.2795 NM_005566 ENSG00000134333 LDHA GSD11|HEL-S-133P|LDHM|PIG19 lactate dehydrogenase A protein-coding Merged-chr17-77140645-1 chr17 77140545 77140745 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001143999) promoter-TSS (NM_001143999) -278 NM_001039573 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding Merged-chr6-85643471-1 chr6 85643371 85643571 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001253771) promoter-TSS (NM_001253771) -146 NM_006372 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding Merged-chr19-38831876-1 chr19 38831776 38831976 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001398) promoter-TSS (NM_001398) -19 NM_001398 1891 Hs.196176 NM_001398 ENSG00000104823 ECH1 HPXEL enoyl-CoA hydratase 1 protein-coding Merged-chr5-41870429-1 chr5 41870329 41870529 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_000436, exon 1 of 17) 5' UTR (NM_000436, exon 1 of 17) 260 NM_000436 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding Merged-chr1-145996671-1 chr1 145996571 145996771 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006472) promoter-TSS (NM_006472) -40 NM_006472 10628 Hs.533977 NM_006472 ENSG00000265972 TXNIP ARRDC6|EST01027|HHCPA78|THIF|VDUP1 thioredoxin interacting protein protein-coding Merged-chr5-75511724-1 chr5 75511624 75511824 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005713) promoter-TSS (NM_005713) -26 NM_001345922 51426 Hs.135756 NM_016218 ENSG00000122008 POLK DINB1|DINP|POLQ DNA polymerase kappa protein-coding Merged-chr19-41884331-1 chr19 41884231 41884431 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_199002) promoter-TSS (NM_199002) -48 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding Merged-chr6-20401703-1 chr6 20401603 20401803 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001949) promoter-TSS (NM_001949) -203 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding Merged-chr17-75261696-1 chr17 75261596 75261796 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015971) promoter-TSS (NM_015971) 28 NM_015971 51081 Hs.71787 NM_015971 ENSG00000125445 MRPS7 MRP-S|MRP-S7|RP-S7|RPMS7|S7mt|bMRP27a mitochondrial ribosomal protein S7 protein-coding Merged-chrX-12011269-1 chrX 12011169 12011369 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -127197 NM_014728 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding Merged-chr12-51173160-1 chr12 51173060 51173260 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001173452) promoter-TSS (NM_001173452) -17 NM_001173453 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding Merged-chr16-8884800-1 chr16 8884700 8884900 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15788 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding Merged-chr17-48486740-1 chr17 48486640 48486840 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 41907 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 -0 uncharacterized LOC101927166 ncRNA Merged-chr16-3003981-1 chr16 3003881 3004081 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 5026 NR_110948 101929613 Hs.741644 NR_110947 LOC101929613 LA16c-380H5.3 uncharacterized LOC101929613 ncRNA Merged-chr1-171485431-1 chr1 171485331 171485531 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015172) promoter-TSS (NM_015172) -96 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding Merged-chr1-19653945-1 chr1 19653845 19654045 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278166, intron 1 of 3) intron (NM_001278166, intron 1 of 3) 6335 NM_001278166 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 neuroblastoma 1 DAN family BMP antagonist protein-coding Merged-chrX-12984722-1 chrX 12984622 12984822 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 9615 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding Merged-chr1-212636863-1 chr1 212636763 212636963 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 12416 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding Merged-chr17-41777697-1 chr17 41777597 41777797 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002230, intron 1 of 13) (AGGCTG)n|Simple_repeat|Simple_repeat 9015 NM_002230 3728 Hs.514174 NM_002230 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding Merged-chr5-30279497-1 chr5 30279397 30279597 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 398937 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 -0 uncharacterized LOC105374704 ncRNA Merged-chr14-51240152-1 chr14 51240052 51240252 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030755) promoter-TSS (NM_030755) -16 NM_030755 81542 Hs.125221 NM_030755 ENSG00000139921 TMX1 PDIA11|TMX|TXNDC|TXNDC1 thioredoxin related transmembrane protein 1 protein-coding Merged-chr17-79393489-1 chr17 79393389 79393589 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 122659 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding protein, fox-1 homolog 3 protein-coding Merged-chr11-65117745-1 chr11 65117645 65117845 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014205) promoter-TSS (NM_014205) -7 NM_014205 741 Hs.121025 NM_014205 ENSG00000174276 ZNHIT2 C11orf5|FON zinc finger HIT-type containing 2 protein-coding Merged-chr10-122287129-1 chr10 122287029 122287229 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_144587, intron 5 of 15) intron (NM_144587, intron 5 of 15) 15833 NM_144587 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding Merged-chr11-12076793-1 chr11 12076693 12076893 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33783 NM_001346299 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding Merged-chr15-59657558-1 chr15 59657458 59657658 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320929) promoter-TSS (NM_001320929) -17 NM_001320930 2958 Hs.512934 NM_004492 ENSG00000140307 GTF2A2 HsT18745|T18745|TF2A2|TFIIA|TFIIA-12|TFIIA-gamma|TFIIAS general transcription factor IIA subunit 2 protein-coding Merged-chr7-46071191-1 chr7 46071091 46071291 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -149919 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding Merged-chr4-56436379-1 chr4 56436279 56436479 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002703) promoter-TSS (NM_002703) 276 NM_001079525 10606 Hs.518774 NM_006452 ENSG00000128050 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase protein-coding Merged-chr20-48791697-1 chr20 48791597 48791797 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 36186 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding Merged-chr5-38845811-1 chr5 38845711 38845911 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001323504) promoter-TSS (NM_001323504) 18 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA Merged-chr1-32291955-1 chr1 32291855 32292055 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004964) promoter-TSS (NM_004964) -152 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|RPD3|RPD3L1 histone deacetylase 1 protein-coding Merged-chr16-30352255-1 chr16 30352155 30352355 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001243646, exon 6 of 6) 3' UTR (NM_001243646, exon 6 of 6) 2679 NM_001243646 10421 Hs.202677 NM_006110 ENSG00000169217 CD2BP2 FWP010|LIN1|PPP1R59|Snu40|U5-52K CD2 cytoplasmic tail binding protein 2 protein-coding Merged-chr17-40284660-1 chr17 40284560 40284760 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3234 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding Merged-chr17-41786869-1 chr17 41786769 41786969 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021991) promoter-TSS (NM_021991) -157 NM_021991 3728 Hs.514174 NM_002230 ENSG00000173801 JUP ARVD12|CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding Merged-chr1-154970835-1 chr1 154970735 154970935 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_183001) promoter-TSS (NM_183001) -88 NM_183001 6464 Hs.433795 NM_003029 ENSG00000160691 SHC1 SHC|SHCA SHC adaptor protein 1 protein-coding Merged-chr15-65611243-1 chr15 65611143 65611343 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001136043) promoter-TSS (NM_001136043) 46 NR_045104 81556 Hs.6686 NM_030800 ENSG00000138614 INTS14 C15orf44|VWA9 integrator complex subunit 14 protein-coding Merged-chr1-22416817-1 chr1 22416717 22416917 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -35034 NM_001330398 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding Merged-chr1-147539214-1 chr1 147539114 147539314 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2287 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS B-cell CLL/lymphoma 9 protein-coding Merged-chr5-132457451-1 chr5 132457351 132457551 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_045116, intron 3 of 3) intron (NR_045116, intron 3 of 3) 33322 NM_002198 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding Merged-chr5-172006766-1 chr5 172006666 172006866 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_012300, exon 1 of 13) 5' UTR (NM_012300, exon 1 of 13) 107 NM_012300 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding Merged-chr14-93043628-1 chr14 93043528 93043728 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001142593, intron 3 of 10) intron (NM_001142593, intron 3 of 10) -23824 NR_002808 319085 Hs.612888 NR_002808 ENSG00000258730 ITPK1-AS1 C14orf85|ITPK1-AS|ITPK1AS|NCRNA00203 ITPK1 antisense RNA 1 ncRNA Merged-chr19-49527790-1 chr19 49527690 49527890 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_020650, exon 1 of 7) 5' UTR (NM_020650, exon 1 of 7) 172 NM_020650 57333 Hs.567550 NM_020650 ENSG00000142552 RCN3 RLP49 reticulocalbin 3 protein-coding Merged-chr20-23358246-1 chr20 23358146 23358346 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_109884) promoter-TSS (NR_109884) -119 NR_109884 100505683 Hs.140295 NR_109884 ENSG00000232645 LINC01431 -0 long intergenic non-protein coding RNA 1431 ncRNA Merged-chr5-56123995-1 chr5 56123895 56124095 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024669, intron 8 of 11) intron (NM_024669, intron 8 of 11) 109364 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 -0 ankyrin repeat domain 55 protein-coding Merged-chr17-82494582-1 chr17 82494482 82494682 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25136 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1 forkhead box K2 protein-coding Merged-chr1-156054725-1 chr1 156054625 156054825 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001145264) promoter-TSS (NM_001145264) -1 NM_001145264 28956 Hs.632483 NM_014017 ENSG00000116586 LAMTOR2 ENDAP|HSPC003|MAPBPIP|MAPKSP1AP|ROBLD3|Ragulator2|p14 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 protein-coding Merged-chr1-37692313-1 chr1 37692213 37692413 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256875) promoter-TSS (NM_001256875) -88 NM_018101 55143 Hs.524571 NM_018101 ENSG00000134690 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding Merged-chr8-30723093-1 chr8 30722993 30723193 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_000637, intron 1 of 12) intron (NM_000637, intron 1 of 12) 4876 NM_001195104 2936 Hs.271510 NM_000637 ENSG00000104687 GSR HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding Merged-chr17-77331610-1 chr17 77331510 77331710 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 12095 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr5-124629120-1 chr5 124629020 124629220 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 115992 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding Merged-chr1-233909428-1 chr1 233909328 233909528 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173508, intron 2 of 7) L2a|LINE|L2 4716 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 -0 solute carrier family 35 member F3 protein-coding Merged-chr17-76546743-1 chr17 76546643 76546843 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 6704 NM_001077620 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 progressive rod-cone degeneration protein-coding Merged-chr11-67374307-1 chr11 67374207 67374407 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013246) promoter-TSS (NM_013246) -130 NM_001166212 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin-like cytokine factor 1 protein-coding Merged-chr20-20052458-1 chr20 20052358 20052558 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278628) promoter-TSS (NM_001278628) 34 NM_001278628 51340 Hs.171342 NM_016652 ENSG00000101343 CRNKL1 CLF|CRN|Clf1|HCRN|MSTP021|SYF3 crooked neck pre-mRNA splicing factor 1 protein-coding Merged-chr9-75028391-1 chr9 75028291 75028491 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_152420) promoter-TSS (NM_152420) 39 NM_152420 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding Merged-chr21-36705176-1 chr21 36705076 36705276 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_009586, intron 1 of 9) CpG 6043 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Merged-chr11-63872113-1 chr11 63872013 63872213 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004954, intron 1 of 16) intron (NM_004954, intron 1 of 16) -16402 NM_017490 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding Merged-chr6-44058713-1 chr6 44058613 44058813 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 15939 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 -0 uncharacterized LOC101929705 ncRNA Merged-chr2-27321252-1 chr2 27321152 27321352 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002437, intron 2 of 7) intron (NM_002437, intron 2 of 7) 1850 NM_002437 4358 Hs.75659 NM_002437 ENSG00000115204 MPV17 MTDPS6|SYM1 MPV17, mitochondrial inner membrane protein protein-coding Merged-chr6-53359553-1 chr6 53359453 53359653 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -10374 NM_001242828 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding Merged-chrX-17032478-1 chrX 17032378 17032578 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001080975, intron 5 of 17) intron (NM_001080975, intron 5 of 17) 85787 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding Merged-chr9-110125347-1 chr9 110125247 110125447 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001136562) promoter-TSS (NM_001136562) -154 NM_001136562 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|MISP2|PRKA2 A-kinase anchoring protein 2 protein-coding Merged-chr15-92904435-1 chr15 92904335 92904535 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036136) promoter-TSS (NR_036136) 36 NR_036136 100422995 NR_036136 ENSG00000173575 MIR3175 mir-3175 microRNA 3175 ncRNA Merged-chr10-101042826-1 chr10 101042726 101042926 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 11587 NM_030971 81855 Hs.283844 NM_030971 ENSG00000107819 SFXN3 BA108L7.2|SFX3 sideroflexin 3 protein-coding Merged-chr1-42958967-1 chr1 42958867 42959067 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_033967) promoter-TSS (NR_033967) -82 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 -0 SLC2A1 antisense RNA 1 ncRNA Merged-chr6-33781614-1 chr6 33781514 33781714 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_181336, intron 3 of 8) intron (NM_181336, intron 3 of 8) 5328 NM_001143944 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|NET25|dJ482C21.1 LEM domain containing 2 protein-coding Merged-chr19-48819572-1 chr19 48819472 48819672 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016246, intron 5 of 8) intron (NM_016246, intron 5 of 8) -8509 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding Merged-chr11-66289299-1 chr11 66289199 66289399 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300861) promoter-TSS (NM_001300861) -132 NM_001300861 10897 Hs.446445 NM_020470 ENSG00000174851 YIF1A 54TM|FinGER7|YIF1|YIF1P Yip1 interacting factor homolog A, membrane trafficking protein protein-coding Merged-chr2-9142978-1 chr2 9142878 9143078 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -63787 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding Merged-chr1-91732553-1 chr1 91732453 91732653 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001195683, intron 5 of 16) intron (NM_001195683, intron 5 of 16) 153726 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding Merged-chr11-62805531-1 chr11 62805431 62805631 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006362) promoter-TSS (NM_006362) -39 NM_001081491 10482 Hs.523739 NM_006362 ENSG00000162231 NXF1 MEX67|TAP nuclear RNA export factor 1 protein-coding Merged-chr15-40340943-1 chr15 40340843 40341043 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_207380) promoter-TSS (NM_207380) 24 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 C15orf52 -0 chromosome 15 open reading frame 52 protein-coding Merged-chr19-55599683-1 chr19 55599583 55599783 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032836) promoter-TSS (NM_032836) -156 NM_032836 84922 Hs.515617 NM_032836 ENSG00000179943 FIZ1 ZNF798 FLT3 interacting zinc finger 1 protein-coding Merged-chr20-38926248-1 chr20 38926148 38926348 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030919) promoter-TSS (NM_030919) -64 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding Merged-chr12-75706143-1 chr12 75706043 75706243 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -194505 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1, small subunit processome component homolog protein-coding Merged-chr22-36467632-1 chr22 36467532 36467732 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_012473, exon 4 of 4) 3' UTR (NM_012473, exon 4 of 4) 14008 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2 thioredoxin 2 protein-coding Merged-chr9-96418461-1 chr9 96418361 96418561 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153695) promoter-TSS (NM_153695) -74 NM_153695 195828 Hs.494557 NM_153695 ENSG00000165244 ZNF367 AFF29|CDC14B|ZFF29 zinc finger protein 367 protein-coding Merged-chr17-43701410-1 chr17 43701310 43701510 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -39516 NM_001040002 4222 Hs.438 NM_004527 ENSG00000005102 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding Merged-chr16-2531965-1 chr16 2531865 2532065 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036139) promoter-TSS (NR_036139) 40 NR_036139 100422974 NR_036139 ENSG00000266232 MIR3178 mir-3178 microRNA 3178 ncRNA Merged-chr1-46604378-1 chr1 46604278 46604478 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024176) promoter-TSS (NR_024176) -84 NR_024176 8569 Hs.371594 NM_003684 ENSG00000079277 MKNK1 MNK1 MAP kinase interacting serine/threonine kinase 1 protein-coding Merged-chr1-8904073-1 chr1 8903973 8904173 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24981 NM_001428 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding Merged-chr5-44875858-1 chr5 44875758 44875958 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR78|LTR|ERV1 66933 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding Merged-chr2-105396853-1 chr2 105396753 105396953 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318899, intron 1 of 7) intron (NM_001318899, intron 1 of 7) 2265 NM_001039492 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding Merged-chr4-110623205-1 chr4 110623105 110623305 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000325) promoter-TSS (NM_000325) -107 NM_000325 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding Merged-chr6-113997312-1 chr6 113997212 113997412 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125845, intron 4 of 9) intron (NR_125845, intron 4 of 9) -26117 NR_033441 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|RPD3|YAF1 histone deacetylase 2 protein-coding Merged-chr19-10654132-1 chr19 10654032 10654232 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024333) promoter-TSS (NR_024333) -129 NM_153464 3609 Hs.465885 NM_004516 ENSG00000129351 ILF3 CBTF|DRBF|DRBP76|MMP4|MPHOSPH4|MPP4|NF-AT-90|NF110|NF110b|NF90|NF90a|NF90b|NFAR|NFAR-1|NFAR2|TCP110|TCP80 interleukin enhancer binding factor 3 protein-coding Merged-chr2-20618118-1 chr2 20618018 20618218 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_022460, exon 7 of 7) 3' UTR (NM_022460, exon 7 of 7) -25570 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 -0 HS1BP3 intronic transcript 1 ncRNA Merged-chr7-73578698-1 chr7 73578598 73578798 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012453) promoter-TSS (NM_012453) -15 NM_012453 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding Merged-chr2-200713220-1 chr2 200713120 200713320 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_037886, exon 3 of 3) non-coding (NR_037886, exon 3 of 3) 17497 NR_135012 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough pseudo Merged-chr14-75400345-1 chr14 75400245 75400445 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -27461 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding Merged-chr2-97664171-1 chr2 97664071 97664271 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005735) promoter-TSS (NM_005735) -73 NM_005735 10120 Hs.98791 NM_005735 ENSG00000115073 ACTR1B ARP1B|CTRN2|PC3 ARP1 actin-related protein 1 homolog B, centractin beta protein-coding Merged-chr12-110109257-1 chr12 110109157 110109357 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -15078 NM_014055 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1 intraflagellar transport 81 protein-coding Merged-chr12-123633722-1 chr12 123633622 123633822 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001414) promoter-TSS (NM_001414) -17 NM_001271868 2967 Hs.355348 NM_001516 ENSG00000111358 GTF2H3 BTF2|P34|TFB4|TFIIH general transcription factor IIH subunit 3 protein-coding Merged-chr1-43969887-1 chr1 43969787 43969987 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319169) promoter-TSS (NM_001319169) -94 NM_001319165 1802 Hs.632398 NM_001384 ENSG00000132768 DPH2 DPH2L2 DPH2 homolog protein-coding Merged-chr2-219642702-1 chr2 219642602 219642802 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_048551) TTS (NR_048551) 15132 NR_048551 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding Merged-chr1-48202107-1 chr1 48202007 48202207 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER3|DNA|hAT-Charlie -19679 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo Merged-chr4-80073219-1 chr4 80073119 80073319 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_058172, exon 1 of 17) 5' UTR (NM_058172, exon 1 of 17) 104 NM_001145794 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF anthrax toxin receptor 2 protein-coding Merged-chr16-67311850-1 chr16 67311750 67311950 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001100915, intron 2 of 15) intron (NM_001100915, intron 2 of 15) 14908 NM_001100915 146212 Hs.299127 NM_001100915 ENSG00000168676 KCTD19 -0 potassium channel tetramerization domain containing 19 protein-coding Merged-chr20-37179052-1 chr20 37178952 37179152 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002951) promoter-TSS (NM_002951) 6 NM_001324306 6185 Hs.370895 NM_002951 ENSG00000118705 RPN2 RIBIIR|RPN-II|RPNII|SWP1 ribophorin II protein-coding Merged-chr22-10717060-1 chr22 10716960 10717160 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 244469 NR_132320 102723780 NR_132320 LOC102723780 -0 protein FRG1-like pseudo Merged-chr9-133944911-1 chr9 133944811 133945011 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003371, intron 1 of 26) intron (NM_003371, intron 1 of 26) 47413 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding Merged-chr19-18193117-1 chr19 18193017 18193217 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032683) promoter-TSS (NM_032683) -113 NM_032683 84769 Hs.515254 NM_032683 ENSG00000254858 MPV17L2 FKSG24 MPV17 mitochondrial inner membrane protein like 2 protein-coding Merged-chr3-88059245-1 chr3 88059145 88059345 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001008390) promoter-TSS (NM_001008390) -249 NM_003663 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding Merged-chr22-31662271-1 chr22 31662171 31662371 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001326411, exon 1 of 8) 5' UTR (NM_001326411, exon 1 of 8) 293 NM_001326413 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding Merged-chr1-170532054-1 chr1 170531954 170532154 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146039) promoter-TSS (NM_001146039) -68 NR_027397 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding Merged-chr21-33324853-1 chr21 33324753 33324953 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000629) promoter-TSS (NM_000629) -56 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding Merged-chr5-36985667-1 chr5 36985567 36985767 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_015384, exon 10 of 46) exon (NM_015384, exon 10 of 46) 108908 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL, cohesin loading factor protein-coding Merged-chr14-24213552-1 chr14 24213452 24213652 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001199821) TTS (NM_001199821) 278 NM_014169 29082 Hs.279761 NM_014169 ENSG00000254505 CHMP4A C14orf123|CHMP4|CHMP4B|HSPC134|SHAX2|SNF7|SNF7-1|VPS32-1|VPS32A charged multivesicular body protein 4A protein-coding Merged-chr22-31102664-1 chr22 31102564 31102764 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_134269, intron 20 of 20) intron (NM_134269, intron 20 of 20) 4923 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding Merged-chr14-75660972-1 chr14 75660872 75661072 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015072) promoter-TSS (NM_015072) 223 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 C14orf1 ERG28|NET51 chromosome 14 open reading frame 1 protein-coding Merged-chr22-19479775-1 chr22 19479675 19479875 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005659) promoter-TSS (NM_005659) -51 NM_001178010 8318 Hs.474217 NM_003504 ENSG00000093009 CDC45 CDC45L|CDC45L2|MGORS7|PORC-PI-1 cell division cycle 45 protein-coding Merged-chr2-112726918-1 chr2 112726818 112727018 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 37759 NR_130712 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L -0 cytoskeleton associated protein 2 like protein-coding Merged-chr1-43582390-1 chr1 43582290 43582490 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329137, intron 9 of 34) intron (NM_001329137, intron 9 of 34) 51530 NM_130440 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase, receptor type F protein-coding Merged-chr19-11496549-1 chr19 11496449 11496649 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_107014) promoter-TSS (NR_107014) -927 NR_107014 102465856 NR_107014 ENSG00000274713 MIR7974 hsa-mir-7974 microRNA 7974 ncRNA Merged-chr2-100562883-1 chr2 100562783 100562983 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024065) promoter-TSS (NM_024065) -73 NM_024065 79031 Hs.469459 NM_024065 ENSG00000115539 PDCL3 HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1 phosducin like 3 protein-coding Merged-chr16-89301761-1 chr16 89301661 89301861 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_045839, intron 5 of 9) intron (NR_045839, intron 5 of 9) 5633 NR_136339 105371414 Hs.657381 NR_136339 LOC105371414 -0 uncharacterized LOC105371414 ncRNA Merged-chr9-112379886-1 chr9 112379786 112379986 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195822) promoter-TSS (NM_001195822) -23 NM_001195822 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding Merged-chr9-108049314-1 chr9 108049214 108049414 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -559594 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding Merged-chr19-54210104-1 chr19 54210004 54210204 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2a|LINE|L2 9210 NM_001321702 6203 Hs.467284 NM_001013 ENSG00000170889 RPS9 S9 ribosomal protein S9 protein-coding Merged-chr17-63251246-1 chr17 63251146 63251346 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_025185, intron 6 of 24) intron (NM_025185, intron 6 of 24) 188965 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding Merged-chr16-67723439-1 chr16 67723339 67723539 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001320239, exon 13 of 13) 3' UTR (NM_001320239, exon 13 of 13) -4069 NR_027398 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 -0 glucose-fructose oxidoreductase domain containing 2 protein-coding Merged-chr22-29553793-1 chr22 29553693 29553893 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001002878) promoter-TSS (NM_001002878) -46 NM_001002877 8563 Hs.75361 NM_003678 ENSG00000100296 THOC5 C22orf19|Fmip|PK1.3|fSAP79 THO complex 5 protein-coding Merged-chr4-153433162-1 chr4 153433062 153433262 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -33184 NM_015196 23240 Hs.732450 NM_015196 ENSG00000121210 KIAA0922 TMEM131L KIAA0922 protein-coding Merged-chr12-6851327-1 chr12 6851227 6851427 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_003481) promoter-TSS (NM_003481) 603 NM_031299 83461 Hs.524216 NM_031299 ENSG00000111665 CDCA3 GRCC8|TOME-1 cell division cycle associated 3 protein-coding Merged-chr1-206890909-1 chr1 206890809 206891009 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER44B|DNA|TcMar-Tigger -6534 NM_001185156 11009 Hs.58831 NM_006850 ENSG00000162892 IL24 C49A|FISP|IL10B|MDA7|MOB5|ST16 interleukin 24 protein-coding Merged-chr7-17533233-1 chr7 17533133 17533333 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110013, intron 1 of 3) intron (NR_110013, intron 1 of 3) 25676 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 -0 uncharacterized LOC101927630 ncRNA Merged-chr3-120596190-1 chr3 120596090 120596290 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001168331) promoter-TSS (NM_001168331) -91 NM_004547 4710 Hs.304613 NM_004547 ENSG00000065518 NDUFB4 B15|CI-B15 NADH:ubiquinone oxidoreductase subunit B4 protein-coding Merged-chr17-42266947-1 chr17 42266847 42267047 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012448, intron 1 of 18) intron (NM_012448, intron 1 of 18) 9459 NM_012448 6777 Hs.595276 NM_012448 ENSG00000173757 STAT5B STAT5 signal transducer and activator of transcription 5B protein-coding Merged-chr4-11960437-1 chr4 11960337 11960537 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1P2|LINE|L1 -263014 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LOC101929019 -0 uncharacterized LOC101929019 ncRNA Merged-chr5-37359732-1 chr5 37359632 37359832 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001278312, intron 3 of 33) L1MCc|LINE|L1 11394 NM_004298 9631 Hs.547696 NM_004298 ENSG00000113569 NUP155 ATFB15|N155 nucleoporin 155 protein-coding Merged-chr10-8590864-1 chr10 8590764 8590964 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134492, intron 1 of 1) intron (NR_134492, intron 1 of 1) 3527 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 -0 uncharacterized LOC105376398 ncRNA Merged-chr15-38398304-1 chr15 38398204 38398404 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -55823 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B -0 family with sequence similarity 98 member B protein-coding Merged-chr15-60393280-1 chr15 60393180 60393380 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001136015, intron 1 of 13) intron (NM_001136015, intron 1 of 13) 4706 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding Merged-chr1-53238573-1 chr1 53238473 53238673 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002370) promoter-TSS (NM_002370) -37 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 -0 uncharacterized LOC100507564 ncRNA Merged-chr10-75401888-1 chr10 75401788 75401988 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_120651) promoter-TSS (NR_120651) 6 NM_032772 84858 Hs.195710 NM_032772 ENSG00000165655 ZNF503 NOLZ-1|NOLZ1|Nlz2 zinc finger protein 503 protein-coding Merged-chr17-14300969-1 chr17 14300869 14301069 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006041) promoter-TSS (NM_006041) -81 NM_006041 9953 Hs.48384 NM_006041 ENSG00000125430 HS3ST3B1 3-OST-3B|3OST3B1|h3-OST-3B heparan sulfate-glucosamine 3-sulfotransferase 3B1 protein-coding Merged-chr5-126778421-1 chr5 126778321 126778521 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134488, intron 1 of 11) CpG 1268 NM_001198557 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding Merged-chr20-41329741-1 chr20 41329641 41329841 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -11112 NR_126051 64900 Hs.25897 NM_022896 ENSG00000132793 LPIN3 LIPN3L|SMP2 lipin 3 protein-coding Merged-chr22-25110901-1 chr22 25110801 25111001 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_038941, intron 3 of 4) intron (NR_038941, intron 3 of 4) 1791 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 -0 uncharacterized LOC100128531 ncRNA Merged-chr6-43629371-1 chr6 43629271 43629471 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019096) promoter-TSS (NM_019096) -125 NM_019096 54676 Hs.485449 NM_019096 ENSG00000172432 GTPBP2 -0 GTP binding protein 2 protein-coding Merged-chr6-32177836-1 chr6 32177736 32177936 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006913).2 promoter-TSS (NM_006913).2 275 NM_032741 10554 Hs.409230 NM_006411 ENSG00000204310 AGPAT1 1-AGPAT1|G15|LPAAT-alpha|LPAATA 1-acylglycerol-3-phosphate O-acyltransferase 1 protein-coding Merged-chr17-58219336-1 chr17 58219236 58219436 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017777) promoter-TSS (NM_017777) -31 NM_001321268 54903 Hs.408843 NM_017777 ENSG00000011143 MKS1 BBS13|JBTS28|MES|MKS|POC12 Meckel syndrome, type 1 protein-coding Merged-chr1-27568565-1 chr1 27568465 27568665 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001029882, intron 1 of 6) CpG 34929 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding Merged-chr14-73950229-1 chr14 73950129 73950329 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_182476) promoter-TSS (NM_182476) -23 NM_182476 51004 Hs.131555 NM_182476 ENSG00000119723 COQ6 CGI-10|CGI10|COQ10D6 coenzyme Q6, monooxygenase protein-coding Merged-chr3-194003766-1 chr3 194003666 194003866 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_033944) promoter-TSS (NR_033944) -107 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 -0 long intergenic non-protein coding RNA 2026 ncRNA Merged-chr10-119306103-1 chr10 119306003 119306203 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -71869 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 -0 microRNA 4681 ncRNA Merged-chr6-37499962-1 chr6 37499862 37500062 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138493) promoter-TSS (NM_138493) -38 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding Merged-chr14-59028770-1 chr14 59028670 59028870 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -159893 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 -0 dishevelled associated activator of morphogenesis 1 protein-coding Merged-chr19-13952361-1 chr19 13952261 13952461 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138353) promoter-TSS (NM_138353) -113 NM_138353 90379 Hs.443636 NM_138353 ENSG00000132017 DCAF15 C19orf72 DDB1 and CUL4 associated factor 15 protein-coding Merged-chr16-57735376-1 chr16 57735276 57735476 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005886) promoter-TSS (NM_005886) -372 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding Merged-chr1-181112635-1 chr1 181112535 181112735 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 24133 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding Merged-chr5-179732686-1 chr5 179732586 179732786 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014757) promoter-TSS (NM_014757) -164 NM_014757 9794 Hs.631951 NM_014757 ENSG00000161021 MAML1 Mam-1|Mam1 mastermind like transcriptional coactivator 1 protein-coding Merged-chr19-16111487-1 chr19 16111387 16111587 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005370) promoter-TSS (NM_005370) -193 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding Merged-chr1-93079188-1 chr1 93079088 93079288 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001164391) promoter-TSS (NM_001164391) -47 NM_001164391 22823 Hs.31016 NM_007358 ENSG00000143033 MTF2 M96|PCL2|TDRD19A|dJ976O13.2 metal response element binding transcription factor 2 protein-coding Merged-chr16-70159588-1 chr16 70159488 70159688 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001322119, exon 17 of 17) 3' UTR (NM_001322119, exon 17 of 17) 13860 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 -0 uncharacterized LOC400541 ncRNA Merged-chr1-95234109-1 chr1 95234009 95234209 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125948) promoter-TSS (NR_125948) -46 NR_103483 25950 Hs.483512 NM_015485 ENSG00000122481 RWDD3 RSUME RWD domain containing 3 protein-coding Merged-chr16-67277432-1 chr16 67277332 67277532 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001129727) promoter-TSS (NM_001129727) -725 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding Merged-chr9-87974754-1 chr9 87974654 87974854 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001039803) promoter-TSS (NM_001039803) 26 NM_001039803 23552 Hs.522274 NM_012119 ENSG00000156345 CDK20 CCRK|CDCH|P42|PNQALRE cyclin dependent kinase 20 protein-coding Merged-chr9-124286051-1 chr9 124285951 124286151 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001166168, intron 1 of 9) MIR3|SINE|MIR -5920 NM_001166170 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding Merged-chr15-67107093-1 chr15 67106993 67107193 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005902, intron 1 of 8) L2a|LINE|L2 -18623 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Merged-chr19-36115390-1 chr19 36115290 36115490 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006233) promoter-TSS (NM_006233) -86 NM_006233 5438 Hs.47062 NM_006233 ENSG00000105258 POLR2I RPB9|hRPB14.5 RNA polymerase II subunit I protein-coding Merged-chr8-23343853-1 chr8 23343753 23343953 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 7645 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 -0 uncharacterized LOC100507156 ncRNA Merged-chr15-34969835-1 chr15 34969735 34969935 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014691) promoter-TSS (NM_014691) -41 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding Merged-chr15-81313270-1 chr15 81313170 81313370 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001172128) TTS (NM_001172128) 10913 NR_135013 80765 Hs.513075 NM_030574 ENSG00000172345 STARD5 -0 StAR related lipid transfer domain containing 5 protein-coding Merged-chr2-45938977-1 chr2 45938877 45939077 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 287073 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding Merged-chr9-72305212-1 chr9 72305112 72305312 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110953) promoter-TSS (NR_110953) -224 NR_110952 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 -0 long intergenic non-protein coding RNA 1504 ncRNA Merged-chr10-123008968-1 chr10 123008868 123009068 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_073475) promoter-TSS (NR_073475) 55 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase, short/branched chain protein-coding Merged-chr19-41440016-1 chr19 41439916 41440116 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001167868) promoter-TSS (NM_001167868) -78 NM_001167869 55101 Hs.351099 NM_018035 ENSG00000105341 ATP5SL -0 ATP5S like protein-coding Merged-chr2-182915739-1 chr2 182915639 182915839 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -48969 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled-related protein protein-coding Merged-chr1-20411372-1 chr1 20411272 20411472 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_033887, intron 1 of 11) MamSINE1|SINE|tRNA-RTE 17422 NR_033887 339505 Hs.633269 NR_033887 LINC01141 -0 long intergenic non-protein coding RNA 1141 ncRNA Merged-chr16-67642485-1 chr16 67642385 67642585 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2642 NM_001013838 146206 Hs.611432 NM_001013838 ENSG00000159753 CARMIL2 CARMIL2b|LRRC16C|RLTPR capping protein regulator and myosin 1 linker 2 protein-coding Merged-chr22-23857776-1 chr22 23857676 23857876 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001024939) promoter-TSS (NM_001024939) -77 NM_001024939 66035 Hs.661910 NM_030807 ENSG00000133460 SLC2A11 GLUT10|GLUT11 solute carrier family 2 member 11 protein-coding Merged-chr1-161166396-1 chr1 161166296 161166496 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001122764) promoter-TSS (NM_001122764) 5 NM_001122764 5498 Hs.517373 NM_000309 ENSG00000143224 PPOX PPO|V290M|VP protoporphyrinogen oxidase protein-coding Merged-chr1-212667593-1 chr1 212667493 212667693 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 32392 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding Merged-chr11-12163416-1 chr11 12163316 12163516 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_106739) promoter-TSS (NR_106739) -267 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA Merged-chr20-35769277-1 chr20 35769177 35769377 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2724 NM_016436 51230 Hs.517044 NM_016436 ENSG00000025293 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding Merged-chr13-89168917-1 chr13 89168817 89169017 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -66374 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 -0 long intergenic non-protein coding RNA 440 ncRNA Merged-chr1-209747917-1 chr1 209747817 209748017 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -5355 NR_134510 101930114 Hs.663934 NR_134509 ENSG00000227591 LOC101930114 -0 uncharacterized LOC101930114 ncRNA Merged-chr1-8212169-1 chr1 8212069 8212269 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_125998, intron 2 of 3) intron (NR_125998, intron 2 of 3) 3497 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 -0 long intergenic non-protein coding RNA 1714 ncRNA Merged-chr3-184320228-1 chr3 184320128 184320328 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004953) promoter-TSS (NM_004953) -85 NM_004953 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding Merged-chr4-98447317-1 chr4 98447217 98447417 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AluJo|SINE|Alu 185941 NM_001100428 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding Merged-chr17-77834629-1 chr17 77834529 77834729 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 49458 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 -0 long intergenic non-protein coding RNA 1973 ncRNA Merged-chr19-58476114-1 chr19 58476014 58476214 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017908) promoter-TSS (NM_017908) -50 NM_017908 55663 Hs.710284 NM_017908 ENSG00000083838 ZNF446 ZKSCAN20|ZSCAN30|ZSCAN52 zinc finger protein 446 protein-coding Merged-chr14-58298443-1 chr14 58298343 58298543 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_029434) promoter-TSS (NR_029434) -61 NM_002892 5926 Hs.161000 NM_002892 ENSG00000032219 ARID4A RBBP-1|RBBP1|RBP-1|RBP1 AT-rich interaction domain 4A protein-coding Merged-chr17-59786753-1 chr17 59786653 59786853 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_030938, intron 7 of 11) intron (NM_030938, intron 7 of 11) -54513 NR_029493 406991 Hs.444569 NR_029493 ENSG00000062716 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA Merged-chr2-126658060-1 chr2 126657960 126658160 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016815, intron 1 of 2) intron (NM_016815, intron 1 of 2) 2125 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding Merged-chr19-14496352-1 chr19 14496252 14496452 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005716) promoter-TSS (NM_005716) -203 NM_202494 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding Merged-chr2-24972128-1 chr2 24972028 24972228 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001198559) promoter-TSS (NM_001198559) 16 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 -0 DNAJC27 antisense RNA 1 ncRNA Merged-chr12-50167475-1 chr12 50167375 50167575 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001281731) promoter-TSS (NM_001281731) 58 NM_001331072 91012 Hs.270525 NM_147190 ENSG00000139624 CERS5 LASS5|Trh4 ceramide synthase 5 protein-coding Merged-chr17-41662902-1 chr17 41662802 41663002 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -22703 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P -0 keratin 42 pseudogene pseudo Merged-chr22-46754569-1 chr22 46754469 46754669 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -8048 NM_001284303 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding Merged-chr16-30430187-1 chr16 30430087 30430287 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_134471) promoter-TSS (NR_134471) -135 NR_134470 79077 Hs.632191 NM_024096 ENSG00000179958 DCTPP1 CDA03|RS21C6|XTP3TPA dCTP pyrophosphatase 1 protein-coding Merged-chr2-20141596-1 chr2 20141496 20141696 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 83570 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding Merged-chr14-34497102-1 chr14 34497002 34497202 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -34840 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding Merged-chr17-32350080-1 chr17 32349980 32350180 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_030362) promoter-TSS (NR_030362) -29 NR_030362 693217 NR_030362 ENSG00000010244 MIR632 MIRN632|hsa-mir-632 microRNA 632 ncRNA Merged-chr19-18279650-1 chr19 18279550 18279750 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_001286968) TTS (NM_001286968) 2006 NM_005354 3727 Hs.2780 NM_005354 ENSG00000130522 JUND AP-1 JunD proto-oncogene, AP-1 transcription factor subunit protein-coding Merged-chr1-20733266-1 chr1 20733166 20733366 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001103160) promoter-TSS (NM_001103160) -626 NM_001103160 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 -0 SH2 domain containing 5 protein-coding Merged-chr19-38335715-1 chr19 38335615 38335815 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001330496) promoter-TSS (NM_001330496) -72 NM_001330496 57828 Hs.324335 NM_021185 ENSG00000099338 CATSPERG C19orf15 cation channel sperm associated auxiliary subunit gamma protein-coding Merged-chr1-202119142-1 chr1 202119042 202119242 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3759 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2 G protein-coupled receptor 37 like 1 protein-coding Merged-chr20-62652361-1 chr20 62652261 62652461 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 9916 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding Merged-chr19-12737112-1 chr19 12737012 12737212 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004317) promoter-TSS (NM_004317) -347 NM_004317 439 Hs.465985 NM_004317 ENSG00000198356 ASNA1 ARSA-I|ARSA1|ASNA-I|GET3|TRC40 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) protein-coding Merged-chr1-29265188-1 chr1 29265088 29265288 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_133178, intron 7 of 29) L1MD2|LINE|L1 28672 NM_001195001 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase, receptor type U protein-coding Merged-chr8-42152697-1 chr8 42152597 42152797 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001134296) promoter-TSS (NM_001134296) -249 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 mu 2 subunit protein-coding Merged-chr2-88055825-1 chr2 88055725 88055925 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304526) promoter-TSS (NM_001304526) -24 NM_016618 51315 Hs.469254 NM_016618 ENSG00000172086 KRCC1 CHBP2 lysine rich coiled-coil 1 protein-coding Merged-chr18-62979351-1 chr18 62979251 62979451 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_194449, exon 17 of 17) exon (NM_194449, exon 17 of 17) 263912 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding Merged-chr10-119658433-1 chr10 119658333 119658533 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 7063 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding Merged-chr8-142952234-1 chr8 142952134 142952334 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -34391 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding Merged-chr1-184755079-1 chr1 184754979 184755179 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001319960) promoter-TSS (NM_001319960) -172 NR_135118 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding Merged-chr12-3123393-1 chr12 3123293 3123493 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 46038 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding Merged-chr17-6546521-1 chr17 6546421 6546621 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001165966, intron 1 of 18) intron (NM_001165966, intron 1 of 18) 10036 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding Merged-chr5-37771760-1 chr5 37771660 37771860 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 63062 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding Merged-chr1-32236290-1 chr1 32236190 32236390 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026850, intron 3 of 6) Tigger7|DNA|TcMar-Tigger 5420 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9-like, pseudogene pseudo Merged-chr16-66873305-1 chr16 66873205 66873405 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -7056 NM_001329929 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding Merged-chr6-36885791-1 chr6 36885691 36885891 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286635) promoter-TSS (NM_001286635) -73 NM_001286637 221477 Hs.433381 NM_152734 ENSG00000198663 C6orf89 BRAP chromosome 6 open reading frame 89 protein-coding Merged-chr1-26677673-1 chr1 26677573 26677773 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 16458 NR_135804 101928728 Hs.128770 NR_135804 ENSG00000260063 LOC101928728 -0 uncharacterized LOC101928728 ncRNA Merged-chr5-140251782-1 chr5 140251682 140251882 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002622, intron 3 of 3) intron (NM_002622, intron 3 of 3) 51322 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding Merged-chr18-22391745-1 chr18 22391645 22391845 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 26170 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T-cell lymphoma-associated antigen 1 protein-coding Merged-chr5-27242090-1 chr5 27241990 27242190 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1PA16|LINE|L1 -203508 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 -0 cadherin 9 protein-coding Merged-chr5-179559563-1 chr5 179559463 179559663 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001040451) promoter-TSS (NM_001040451) -129 NM_001040451 80230 Hs.306769 NM_025158 ENSG00000176783 RUFY1 RABIP4|ZFYVE12 RUN and FYVE domain containing 1 protein-coding Merged-chr3-158725426-1 chr3 158725326 158725526 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002888, intron 1 of 3) intron (NM_002888, intron 1 of 3) 7060 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding Merged-chr2-41840952-1 chr2 41840852 41841052 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -36603 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 -0 long intergenic non-protein coding RNA 1913 ncRNA Merged-chr1-37990164-1 chr1 37990064 37990264 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001320830) promoter-TSS (NM_001320830) -54 NM_006802 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding Merged-chr6-132131922-1 chr6 132131822 132132022 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2056 NR_038981 100507254 Hs.103070 NR_038981 LINC01013 -0 long intergenic non-protein coding RNA 1013 ncRNA Merged-chr9-128276164-1 chr9 128276064 128276264 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004486) promoter-TSS (NM_004486) 18 NM_001040011 375757 Hs.259594 NM_001040011 ENSG00000175854 SWI5 C9orf119|SAE3 SWI5 homologous recombination repair protein protein-coding Merged-chr19-57351227-1 chr19 57351127 57351327 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001329456) promoter-TSS (NM_001329456) -47 NM_001329456 57343 Hs.287374 NM_020657 ENSG00000131845 ZNF304 -0 zinc finger protein 304 protein-coding Merged-chr1-9881921-1 chr1 9881821 9882021 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001012329, intron 1 of 4) intron (NM_001012329, intron 1 of 4) 28337 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding Merged-chr16-9047794-1 chr16 9047694 9047894 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -43886 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding Merged-chrX-5932962-1 chrX 5932862 5933062 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020742, intron 3 of 5) L1ME3D|LINE|L1 -293396 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 -0 uncharacterized LOC105373156 ncRNA Merged-chr15-84981316-1 chr15 84981216 84981416 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_173454) promoter-TSS (NM_173454) -658 NM_002605 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding Merged-chr22-43921528-1 chr22 43921428 43921628 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2211 NM_025225 80339 Hs.654800 NM_025225 ENSG00000100344 PNPLA3 ADPN|C22orf20|iPLA(2)epsilon patatin like phospholipase domain containing 3 protein-coding Merged-chr19-11168663-1 chr19 11168563 11168763 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001329451, intron 11 of 11) L2a|LINE|L2 -12851 NM_182513 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24, NDC80 kinetochore complex component protein-coding Merged-chr12-49568108-1 chr12 49568008 49568208 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278341) promoter-TSS (NM_001278341) 37 NM_001278341 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding Merged-chr1-161225986-1 chr1 161225886 161226086 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032174) promoter-TSS (NM_032174) 47 NM_032174 84134 Hs.321653 NM_032174 ENSG00000158882 TOMM40L TOMM40B translocase of outer mitochondrial membrane 40 like protein-coding Merged-chr17-82297961-1 chr17 82297861 82298061 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -5147 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 -0 long intergenic non-protein coding RNA 1970 ncRNA Merged-chr8-61714850-1 chr8 61714750 61714950 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_039680) promoter-TSS (NR_039680) 62 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA Merged-chr6-30067054-1 chr6 30066954 30067154 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021959).4 promoter-TSS (NM_021959).4 -101 NM_021959 6992 Hs.82887 NM_021959 ENSG00000204619 PPP1R11 CFAP255|HCG-V|HCGV|IPP3|TCTE5|TCTEX5 protein phosphatase 1 regulatory inhibitor subunit 11 protein-coding Merged-chr7-137882384-1 chr7 137882284 137882484 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_194071, intron 11 of 11) intron (NM_194071, intron 11 of 11) -35520 NM_001321710 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding Merged-chr17-44123806-1 chr17 44123706 44123906 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005474) promoter-TSS (NM_005474) -160 NM_005474 10014 Hs.438782 NM_005474 ENSG00000108840 HDAC5 HD5|NY-CO-9 histone deacetylase 5 protein-coding Merged-chr11-8732910-1 chr11 8732810 8733010 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_213618, intron 2 of 19) intron (NM_213618, intron 2 of 19) -35868 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 -0 uncharacterized LOC102724784 ncRNA Merged-chr17-43170338-1 chr17 43170238 43170438 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_110868) promoter-TSS (NR_110868) 65 NR_110868 101929767 Hs.640892 NR_110868 LOC101929767 -0 uncharacterized LOC101929767 ncRNA Merged-chr4-184474666-1 chr4 184474566 184474766 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002199) promoter-TSS (NM_002199) -94 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding Merged-chr19-507149-1 chr19 507049 507249 0 4.560000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_033513) promoter-TSS (NM_033513) -348 NM_033513 91978 Hs.369613 NM_033513 ENSG00000141933 TPGS1 C19orf20|GTRGEO22|PGs1 tubulin polyglutamylase complex subunit 1 protein-coding Merged-chr11-45847276-2 chr11 45847142 45847411 0 4.550000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_021117) promoter-TSS (NM_021117) -130 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian clock 2 protein-coding Merged-chr22-35400027-2 chr22 35399872 35400183 0 4.550000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006739) promoter-TSS (NM_006739) -96 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|P1-CDC46 minichromosome maintenance complex component 5 protein-coding Merged-chr11-67428401-2 chr11 67428290 67428512 0 4.550000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003952) promoter-TSS (NM_003952) -63 NM_003952 6199 Hs.534345 NM_003952 ENSG00000175634 RPS6KB2 KLS|P70-beta|P70-beta-1|P70-beta-2|S6K-beta2|S6K2|SRK|STK14B|p70(S6K)-beta|p70S6Kb ribosomal protein S6 kinase B2 protein-coding Merged-chr3-184017997-2 chr3 184017897 184018098 0 4.550000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_135125) promoter-TSS (NR_135125) -37 NM_001023587 10057 Hs.368563 NM_005688 ENSG00000114770 ABCC5 ABC33|EST277145|MOAT-C|MOATC|MRP5|SMRP|pABC11 ATP binding cassette subfamily C member 5 protein-coding Merged-chr1-18875402-2 chr1 18875246 18875558 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_001161504, exon 13 of 15) exon (NM_001161504, exon 13 of 15) 7873 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 -0 microRNA 4695 ncRNA Merged-chr6-30213506-2 chr6 30213353 30213659 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001242783) promoter-TSS (NM_001242783) -12 NM_003449 7726 Hs.485041 NM_003449 ENSG00000234127 TRIM26 AFP|RNF95|ZNF173 tripartite motif containing 26 protein-coding Merged-chr1-1555036-2 chr1 1554915 1555157 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014188, intron 2 of 4) intron (NM_014188, intron 2 of 4) -14676 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding Merged-chr2-109172071-2 chr2 109171947 109172196 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -30483 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 -0 microRNA 4265 ncRNA Merged-chr3-146544750-2 chr3 146544618 146544883 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_021105) promoter-TSS (NM_021105) 91 NM_021105 5359 Hs.130759 NM_021105 ENSG00000188313 PLSCR1 MMTRA1B phospholipid scramblase 1 protein-coding Merged-chr5-98755467-2 chr5 98755317 98755618 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13828 NM_001012761 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule family member b protein-coding Merged-chr19-10717783-2 chr19 10717665 10717901 0 4.540000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001005360) promoter-TSS (NM_001005360) -270 NM_001005361 1785 Hs.211463 NM_004945 ENSG00000079805 DNM2 CMT2M|CMTDI1|CMTDIB|DI-CMTB|DYN2|DYNII|LCCS5 dynamin 2 protein-coding Merged-chr19-17108155-2 chr19 17108053 17108257 0 4.530000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 32374 NM_004145 4650 Hs.123198 NM_004145 ENSG00000099331 MYO9B CELIAC4|MYR5 myosin IXB protein-coding Merged-chr12-31729148-2 chr12 31728991 31729305 0 4.530000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001113402) promoter-TSS (NM_001113402) 26 NM_001278411 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 -0 antagonist of mitotic exit network 1 homolog protein-coding Merged-chr1-1360745-2 chr1 1360618 1360873 0 4.530000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001282582, intron 1 of 10) intron (NM_001282582, intron 1 of 10) 1032 NM_001282583 54587 Hs.515687 NM_032348 ENSG00000162576 MXRA8 -0 matrix remodeling associated 8 protein-coding Merged-chr19-55259345-1 chr19 55259245 55259445 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_014931) promoter-TSS (NM_014931) -675 NM_014931 22870 Hs.515610 NM_014931 ENSG00000105063 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6 regulatory subunit 1 protein-coding Merged-chr18-77065334-1 chr18 77065234 77065434 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001025100, intron 3 of 3) MSTC|LTR|ERVL-MaLR -48235 NM_001025092 4155 Hs.551713 NM_002385 ENSG00000197971 MBP -0 myelin basic protein protein-coding Merged-chr18-22695120-1 chr18 22695020 22695220 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 91717 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 -0 uncharacterized LOC101927571 ncRNA Merged-chr1-17128374-1 chr1 17128274 17128474 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -8921 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding Merged-chr22-36542294-1 chr22 36542194 36542394 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -13064 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding Merged-chr22-22111625-1 chr22 22111525 22111725 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -67691 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal-like, pseudogene pseudo Merged-chrX-45771270-1 chrX 45771170 45771370 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -24146 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA Merged-chr5-31100770-1 chr5 31100670 31100870 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -92885 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding Merged-chr1-166876367-1 chr1 166876267 166876467 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_053053) promoter-TSS (NM_053053) 50 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding Merged-chr7-20199628-1 chr7 20199528 20199728 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_182762, intron 1 of 6) intron (NM_182762, intron 1 of 6) 17762 NM_182762 346389 Hs.598388 NM_182762 ENSG00000183742 MACC1 7A5|SH3BP4L MACC1, MET transcriptional regulator protein-coding Merged-chr15-67150592-1 chr15 67150492 67150692 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 12571 NM_001145103 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Merged-chr22-29907932-1 chr22 29907832 29908032 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) 24763 NM_153051 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding Merged-chr18-70171367-1 chr18 70171267 70171467 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_173630, intron 11 of 48) intron (NM_173630, intron 11 of 48) 34359 NM_173630 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding Merged-chr20-32326004-1 chr20 32325904 32326104 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_004798, intron 5 of 8) intron (NM_004798, intron 5 of 8) -32340 NM_001164603 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS additional sex combs like 1 transcriptional regulator protein-coding Merged-chr17-4143093-1 chr17 4142993 4143193 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_015113) promoter-TSS (NM_015113) -75 NM_144611 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 -0 cytochrome b5 domain containing 2 protein-coding Merged-chr1-45522008-1 chr1 45521908 45522108 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_002574) promoter-TSS (NM_002574) -70 NM_181696 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding Merged-chr1-183280042-1 chr1 183279942 183280142 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015039, intron 7 of 10) intron (NM_015039, intron 7 of 10) 24832 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding Merged-chr2-59418994-1 chr2 59418894 59419094 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic L1ME5|LINE|L1 201286 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 -0 long intergenic non-protein coding RNA 1793 ncRNA Merged-chr20-17850083-1 chr20 17849983 17850183 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 112863 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA Merged-chr11-6612387-1 chr11 6612287 6612487 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006284) promoter-TSS (NM_006284) -143 NM_006284 6881 Hs.5158 NM_006284 ENSG00000166337 TAF10 TAF2A|TAF2H|TAFII30 TATA-box binding protein associated factor 10 protein-coding Merged-chrX-12529545-1 chrX 12529445 12529645 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_014728, intron 2 of 16) L2c|LINE|L2 -261810 NM_002765 5634 Hs.654581 NM_002765 ENSG00000101911 PRPS2 PRSII phosphoribosyl pyrophosphate synthetase 2 protein-coding Merged-chr2-230220132-1 chr2 230220032 230220232 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_004509) promoter-TSS (NM_004509) -20 NM_080424 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding Merged-chr18-54149195-1 chr18 54149095 54149295 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 73217 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA Merged-chr9-128371299-1 chr9 128371199 128371399 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001135947) promoter-TSS (NM_001135947) -20 NM_001135947 81605 Hs.495229 NM_030914 ENSG00000167118 URM1 C9orf74 ubiquitin related modifier 1 protein-coding Merged-chr3-141332035-1 chr3 141331935 141332135 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 7822 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding Merged-chr5-36115343-1 chr5 36115243 36115443 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001007527, intron 11 of 17) intron (NM_001007527, intron 11 of 17) 32645 NR_030306 693165 NR_030306 ENSG00000207756 MIR580 MIRN580|hsa-mir-580 microRNA 580 ncRNA Merged-chr14-66508038-1 chr14 66507938 66508138 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt 5' UTR (NM_020806, exon 1 of 23) 5' UTR (NM_020806, exon 1 of 23) 631 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding Merged-chr1-15800373-1 chr1 15800273 15800473 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 7326 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL -0 ubiquinol-cytochrome c reductase hinge protein like protein-coding Merged-chr14-24442902-2 chr14 24442793 24443012 0 4.520000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_110032) promoter-TSS (NR_110032) 3 NM_001290292 56948 Hs.643552 NM_020195 ENSG00000100445 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U member 1 protein-coding Merged-chr3-177165643-1 chr3 177165543 177165743 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_024665, intron 1 of 15) L1MC1|LINE|L1 30841 NM_001321193 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding Merged-chr17-77255556-1 chr17 77255456 77255656 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -25854 NM_001113491 10801 Hs.440932 NM_006640 ENSG00000184640 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Merged-chr9-76696981-1 chr9 76696881 76697081 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_131751, intron 8 of 15) LTR33|LTR|ERVL -4566 NM_001308050 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 protein-coding Merged-chr5-39232222-1 chr5 39232122 39232322 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001243093, intron 1 of 18) intron (NM_001243093, intron 1 of 18) -12644 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB ADAP|PRO0823|SLAP-130|SLAP130 FYN binding protein protein-coding Merged-chr5-27837906-1 chr5 27837806 27838006 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 365614 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 LINC01021 -0 long intergenic non-protein coding RNA 1021 ncRNA Merged-chr7-7640616-1 chr7 7640516 7640716 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001302350) promoter-TSS (NM_001302350) -20 NM_001302350 729852 Hs.652371 NM_001302348 ENSG00000219545 UMAD1 RPA3-AS1|RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein-coding Merged-chr22-19881410-1 chr22 19881310 19881510 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_006440, intron 12 of 17) intron (NM_006440, intron 12 of 17) -26471 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding Merged-chr12-45415514-1 chr12 45415414 45415614 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001142678, intron 16 of 19) intron (NM_001142678, intron 16 of 19) 122831 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding Merged-chr1-20633358-1 chr1 20633258 20633458 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_032409) promoter-TSS (NM_032409) -97 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced putative kinase 1 protein-coding Merged-chr12-31736535-1 chr12 31736435 31736635 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -7361 NM_001278412 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 -0 antagonist of mitotic exit network 1 homolog protein-coding Merged-chr11-64335279-1 chr11 64335179 64335379 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4939 NM_032251 283234 Hs.98564 NM_032251 ENSG00000168071 CCDC88B BRLZ|CCDC88|HKRP3|gipie coiled-coil domain containing 88B protein-coding Merged-chr1-109984652-1 chr1 109984552 109984752 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006621) promoter-TSS (NM_006621) -113 NM_006621 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding Merged-chr17-44111233-1 chr17 44111133 44111333 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001015053, intron 2 of 26) intron (NM_001015053, intron 2 of 26) -4679 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 -0 uncharacterized LOC105371789 ncRNA Merged-chr19-46793275-1 chr19 46793175 46793375 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic (ATTC)n|Simple_repeat|Simple_repeat -4690 NM_005628 6510 Hs.631582 NM_005628 ENSG00000105281 SLC1A5 AAAT|ASCT2|ATBO|M7V1|M7VS1|R16|RDRC solute carrier family 1 member 5 protein-coding Merged-chr17-40549546-1 chr17 40549446 40549646 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 10848 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding Merged-chr8-140394004-1 chr8 140393904 140394104 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_031466, intron 7 of 22) intron (NM_031466, intron 7 of 22) 63758 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding Merged-chr5-27156844-1 chr5 27156744 27156944 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic THE1D|LTR|ERVL-MaLR -118262 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 -0 cadherin 9 protein-coding Merged-chr1-24192061-1 chr1 24191961 24192161 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -4786 NM_173064 163702 Hs.221375 NM_170743 ENSG00000185436 IFNLR1 CRF2/12|IFNLR|IL-28R1|IL28RA|LICR2 interferon lambda receptor 1 protein-coding Merged-chr5-172733767-1 chr5 172733667 172733867 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -21736 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 -0 uncharacterized LOC101928093 protein-coding Merged-chr1-117060190-1 chr1 117060090 117060290 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_003594) promoter-TSS (NM_003594) -137 NM_003594 8458 Hs.32333 NM_003594 ENSG00000116830 TTF2 HuF2|ZGRF6 transcription termination factor 2 protein-coding Merged-chr2-219453134-1 chr2 219453034 219453234 0 4.520000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_005876, intron 6 of 40) intron (NM_005876, intron 6 of 40) -7678 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|SPEGalpha|SPEGbeta SPEG complex locus protein-coding Merged-chr17-7404196-2 chr17 7404096 7404296 0 4.385000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_037719) promoter-TSS (NR_037719) -65 NM_152766 254863 Hs.730789 NM_152766 ENSG00000205544 TMEM256 C17orf61 transmembrane protein 256 protein-coding Merged-chr8-63168502-2 chr8 63168402 63168602 0 4.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NR_102684) promoter-TSS (NR_102684) -51 NM_001277815 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 -0 YTH N6-methyladenosine RNA binding protein 3 protein-coding Merged-chr17-40013909-2 chr17 40013801 40014018 0 4.380000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1452 NR_033662 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding Merged-chr16-29816114-2 chr16 29815965 29816264 0 4.370000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt|GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_024516) promoter-TSS (NM_024516) -93 NM_024516 79447 Hs.702841 NM_024516 ENSG00000280789 PAGR1 C16orf53|GAS|PA1 PAXIP1 associated glutamate rich protein 1 protein-coding Merged-chr20-46954660-1 chr20 46954560 46954760 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005244, intron 1 of 15) intron (NM_005244, intron 1 of 15) 60036 NM_172110 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding Merged-chr16-69311242-1 chr16 69311142 69311342 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_013245) promoter-TSS (NM_013245) -142 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding Merged-chr4-39639088-1 chr4 39638988 39639188 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001317896) promoter-TSS (NM_001317896) -90 NM_001317896 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding Merged-chr2-195657245-1 chr2 195657145 195657345 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_020342, exon 1 of 10) 5' UTR (NM_020342, exon 1 of 10) 117 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding Merged-chr5-150759081-1 chr5 150758981 150759181 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001135644) promoter-TSS (NM_001135644) 14 NM_016221 51164 Hs.675564 NM_016221 ENSG00000132912 DCTN4 DYN4|P62 dynactin subunit 4 protein-coding Merged-chr2-128306304-1 chr2 128306204 128306404 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 12293 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding Merged-chr3-105869499-1 chr3 105869399 105869599 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001321788) promoter-TSS (NM_001321788) -77 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding Merged-chr1-12616293-1 chr1 12616193 12616393 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_004753, intron 1 of 5) intron (NM_004753, intron 1 of 5) 491 NM_001319225 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding Merged-chr1-234612825-1 chr1 234612725 234612925 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3300 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 -0 interferon regulatory factor 2 binding protein 2 protein-coding Merged-chr14-25111119-1 chr14 25111019 25111219 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -60822 NM_001304476 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding Merged-chr9-124812601-1 chr9 124812501 124812701 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_182487, exon 8 of 8) 3' UTR (NM_182487, exon 8 of 8) 11727 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding Merged-chr1-154973906-1 chr1 154973806 154974006 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001826) promoter-TSS (NM_001826) 577 NM_001130041 6464 Hs.433795 NM_003029 ENSG00000160691 SHC1 SHC|SHCA SHC adaptor protein 1 protein-coding Merged-chr17-7836881-1 chr17 7836781 7836981 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3036 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding Merged-chr16-30370689-1 chr16 30370589 30370789 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015527) promoter-TSS (NM_015527) -245 NM_001324459 29895 Hs.50889 NM_013292 ENSG00000180209 MYLPF HUMMLC2B|MLC2B|MRLC2|MYL11 myosin light chain, phosphorylatable, fast skeletal muscle protein-coding Merged-chr5-59134187-1 chr5 59134087 59134287 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001165899, intron 7 of 16) intron (NM_001165899, intron 7 of 16) -94675 NM_001197222 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding Merged-chr2-207258646-1 chr2 207258546 207258746 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4330 NR_110283 101927865 Hs.574609 NR_110283 LOC101927865 -0 uncharacterized LOC101927865 ncRNA Merged-chr17-39153028-1 chr17 39152928 39153128 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1379 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding Merged-chr22-31646602-1 chr22 31646502 31646702 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001326416, intron 3 of 10) intron (NM_001326416, intron 3 of 10) -8099 NM_178022 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding Merged-chr17-45425882-1 chr17 45425782 45425982 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_199282) promoter-TSS (NM_199282) -236 NM_199282 201176 Hs.205326 NM_174919 ENSG00000159314 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding Merged-chr1-34859833-1 chr1 34859733 34859933 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001164824) promoter-TSS (NM_001164824) -17 NM_138428 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding Merged-chr9-137482367-1 chr9 137482267 137482467 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_152286, intron 20 of 33) L1MC1|LINE|L1 -23033 NM_001130969 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding Merged-chr2-38720765-1 chr2 38720665 38720865 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138801, intron 4 of 6) MLT1G3|LTR|ERVL-MaLR 30729 NM_001031684 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding Merged-chr6-36643217-1 chr6 36643117 36643317 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -20705 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 -0 microRNA 3925 ncRNA Merged-chr6-133502857-1 chr6 133502757 133502957 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_109982, intron 8 of 8) intron (NR_109982, intron 8 of 8) 261358 NM_001301013 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding Merged-chr16-84994913-1 chr16 84994813 84995013 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_017740, intron 2 of 7) intron (NM_017740, intron 2 of 7) 16622 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding Merged-chr2-148020946-1 chr2 148020846 148021046 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181741) promoter-TSS (NM_181741) -52 NM_181741 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding Merged-chr19-13621623-1 chr19 13621523 13621723 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER5A1|DNA|hAT-Charlie -110137 NM_001320565 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 -0 coiled-coil domain containing 130 protein-coding Merged-chr12-6470806-1 chr12 6470706 6470906 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_014231) promoter-TSS (NM_014231) 93 NM_014231 6843 Hs.20021 NM_014231 ENSG00000139190 VAMP1 SPAX1|SYB1|VAMP-1 vesicle associated membrane protein 1 protein-coding Merged-chr17-39451334-1 chr17 39451234 39451434 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004774) promoter-TSS (NM_004774) -60 NM_004774 5469 Hs.643754 NM_004774 ENSG00000125686 MED1 CRSP1|CRSP200|DRIP205|DRIP230|PBP|PPARBP|PPARGBP|RB18A|TRAP220|TRIP2 mediator complex subunit 1 protein-coding Merged-chr6-32854120-1 chr6 32854020 32854220 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000593).8 promoter-TSS (NM_000593).8 -41 NM_002800 5698 Hs.654585 NM_002800 ENSG00000240065 PSMB9 LMP2|PSMB6i|RING12|beta1i proteasome subunit beta 9 protein-coding Merged-chr8-94227237-1 chr8 94227137 94227337 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -9934 NM_001144663 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding Merged-chr5-132103429-1 chr5 132103329 132103529 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 29637 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 GMCSF colony stimulating factor 2 protein-coding Merged-chr3-98522987-1 chr3 98522887 98523087 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019895) promoter-TSS (NM_019895) 79 NM_001040199 56650 Hs.531371 NM_019895 ENSG00000080822 CLDND1 C3orf4|GENX-3745 claudin domain containing 1 protein-coding Merged-chr10-48334035-1 chr10 48333935 48334135 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_139049, intron 3 of 13) intron (NM_139049, intron 3 of 13) 27396 NM_001323321 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding Merged-chr7-42932304-1 chr7 42932204 42932404 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002787) promoter-TSS (NM_002787) -36 NM_031903 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding Merged-chr20-23361825-1 chr20 23361725 23361925 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_022482) promoter-TSS (NM_022482) -307 NM_001317012 64412 Hs.709462 NM_022482 ENSG00000125812 GZF1 ZBTB23|ZNF336 GDNF inducible zinc finger protein 1 protein-coding Merged-chr17-82267880-1 chr17 82267780 82267980 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001893, intron 1 of 8) intron (NM_001893, intron 1 of 8) 5838 NM_139062 1453 Hs.631725 NM_001893 ENSG00000141551 CSNK1D ASPS|CKIdelta|FASPS2|HCKID casein kinase 1 delta protein-coding Merged-chr10-114271846-1 chr10 114271746 114271946 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001320804, intron 5 of 13) intron (NM_001320804, intron 5 of 13) 32232 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|NET42 von Willebrand factor A domain containing 2 protein-coding Merged-chr8-29555509-1 chr8 29555409 29555609 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 192600 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA Merged-chr15-42495602-1 chr15 42495502 42495702 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_003825, exon 1 of 8) 5' UTR (NM_003825, exon 1 of 8) 296 NM_130798 8773 Hs.511149 NM_003825 ENSG00000092531 SNAP23 HsT17016|SNAP-23|SNAP23A|SNAP23B synaptosome associated protein 23 protein-coding Merged-chr16-327421-1 chr16 327321 327521 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_134879, intron 2 of 8) intron (NR_134879, intron 2 of 8) 25255 NM_003502 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding Merged-chr8-48420622-1 chr8 48420522 48420722 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L2c|LINE|L2 -130945 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 -0 uncharacterized LOC101929268 ncRNA Merged-chr16-81890581-1 chr16 81890481 81890681 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002661, intron 10 of 32) intron (NM_002661, intron 10 of 32) 111323 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding Merged-chr15-43510928-1 chr15 43510828 43511028 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005657) promoter-TSS (NM_005657) -419 NM_005657 7158 Hs.440968 NM_005657 ENSG00000067369 TP53BP1 53BP1|TDRD30|TP53|p202|p53BP1 tumor protein p53 binding protein 1 protein-coding Merged-chr1-156709956-1 chr1 156709856 156710056 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -4140 NM_001199723 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding Merged-chrX-23743382-1 chrX 23743282 23743482 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001033583) promoter-TSS (NM_001033583) -92 NM_001033583 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding Merged-chr11-33161622-1 chr11 33161522 33161722 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001326) promoter-TSS (NM_001326) -35 NR_034027 338739 Hs.423476 NR_034027 ENSG00000247151 CSTF3-AS1 -0 CSTF3 antisense RNA 1 (head to head) ncRNA Merged-chr20-24673013-1 chr20 24672913 24673113 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 203207 NM_001323607 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Merged-chr2-45964378-1 chr2 45964278 45964478 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 312474 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding Merged-chr15-63479819-1 chr15 63479719 63479919 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR101_Mam|LTR|ERVL -24692 NR_046341 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding Merged-chr22-20496689-1 chr22 20496589 20496789 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032775) promoter-TSS (NM_032775) -806 NM_032775 84861 Hs.517419 NM_032775 ENSG00000099910 KLHL22 KELCHL kelch like family member 22 protein-coding Merged-chr10-124419043-1 chr10 124418943 124419143 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001171814) promoter-TSS (NM_001171814) -67 NM_001322967 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding Merged-chr10-74826417-1 chr10 74826317 74826517 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001256468) promoter-TSS (NM_001256468) 4 NM_012330 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding Merged-chr13-97433442-1 chr13 97433342 97433542 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_021033) promoter-TSS (NM_021033) -779 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding Merged-chr2-8681945-1 chr2 8681845 8682045 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002166) promoter-TSS (NM_002166) -38 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 HLH protein protein-coding Merged-chr17-2244867-1 chr17 2244767 2244967 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_017575, intron 8 of 18) intron (NM_017575, intron 8 of 18) -8020 NM_001256828 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6, nonsense mediated mRNA decay factor protein-coding Merged-chr5-140564608-1 chr5 140564508 140564708 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_106889) promoter-TSS (NR_106889) -4 NM_133173 10307 Hs.529449 NM_006051 ENSG00000113108 APBB3 FE65L2|SRA amyloid beta precursor protein binding family B member 3 protein-coding Merged-chr6-142902912-1 chr6 142902812 142903012 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 42289 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding Merged-chr1-205284876-1 chr1 205284776 205284976 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 27679 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding Merged-chr1-201457148-1 chr1 201457048 201457248 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 12023 NR_073080 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding Merged-chr6-122471877-1 chr6 122471777 122471977 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001270394) promoter-TSS (NM_001270394) 4 NM_020755 57515 Hs.146668 NM_020755 ENSG00000111897 SERINC1 TDE1L|TDE2|TMS-2|TMS2 serine incorporator 1 protein-coding Merged-chr10-75547518-1 chr10 75547418 75547618 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) -4940 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA Merged-chr22-38298784-1 chr22 38298684 38298884 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001289912, intron 11 of 14) intron (NM_001289912, intron 11 of 14) 18624 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding Merged-chr2-20356267-1 chr2 20356167 20356367 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1H|LTR|ERVL-MaLR -5417 NM_015317 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding Merged-chr2-235331228-1 chr2 235331128 235331328 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L3|LINE|CR1 -162861 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding Merged-chr1-184982317-1 chr1 184982217 184982417 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic AmnSINE1|SINE|5S-Deu-L2 -7731 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 FAM129A C1orf24|GIG39|NIBAN family with sequence similarity 129 member A protein-coding Merged-chr5-115626152-1 chr5 115626052 115626252 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_181836) promoter-TSS (NM_181836) 27 NM_001164468 100302736 NM_001164468 ENSG00000251201 TMED7-TICAM2 -0 TMED7-TICAM2 readthrough protein-coding Merged-chr10-69383016-1 chr10 69382916 69383116 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_033498, intron 13 of 20) intron (NM_033498, intron 13 of 20) 33902 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding Merged-chr2-25878663-1 chr2 25878563 25878763 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018263) promoter-TSS (NM_018263) -220 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS additional sex combs like 2 transcriptional regulator protein-coding Merged-chr11-68030576-1 chr11 68030476 68030676 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002496) promoter-TSS (NM_002496) -41 NM_002496 4728 Hs.90443 NM_002496 ENSG00000110717 NDUFS8 CI-23k|CI23KD|TYKY NADH:ubiquinone oxidoreductase core subunit S8 protein-coding Merged-chr18-77114572-1 chr18 77114472 77114672 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 18246 NM_001025100 4155 Hs.551713 NM_002385 ENSG00000197971 MBP -0 myelin basic protein protein-coding Merged-chr6-35728126-1 chr6 35728026 35728226 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_027117, intron 9 of 9) CpG 457 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FK506 binding protein 5 protein-coding Merged-chr19-54190658-1 chr19 54190558 54190758 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001146056).7 promoter-TSS (NM_001146056).7 -73 NM_001282332 79042 Hs.15580 NM_024075 ENSG00000170892 TSEN34 LENG5|PCH2C|SEN34|SEN34L tRNA splicing endonuclease subunit 34 protein-coding Merged-chr20-36951814-1 chr20 36951714 36951914 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015474) promoter-TSS (NM_015474) 29 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding Merged-chr7-2157844-1 chr7 2157744 2157944 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001013836, intron 10 of 18) intron (NM_001013836, intron 10 of 18) 75104 NM_003550 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient like 1 protein-coding Merged-chr3-170726803-1 chr3 170726703 170726903 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135556, intron 4 of 5) L2a|LINE|L2 -140729 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding Merged-chr1-7954191-1 chr1 7954091 7954291 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -7463 NM_007262 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|HEL-S-67p Parkinsonism associated deglycase protein-coding Merged-chr1-54850979-1 chr1 54850879 54851079 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_014762, exon 9 of 9) 3' UTR (NM_014762, exon 9 of 9) 36269 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding Merged-chr10-72626113-1 chr10 72626013 72626213 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001195518) promoter-TSS (NM_001195518) 78 NM_006077 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS mitochondrial calcium uptake 1 protein-coding Merged-chr1-85629158-1 chr1 85629058 85629258 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 48397 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CYR61 CCN1|GIG1|IGFBP10 cysteine rich angiogenic inducer 61 protein-coding Merged-chr19-33081146-1 chr19 33081046 33081246 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_135270, exon 1 of 21) non-coding (NR_135270, exon 1 of 21) 266 NM_018025 55094 Hs.466436 NM_018025 ENSG00000076650 GPATCH1 ECGP|GPATC1 G-patch domain containing 1 protein-coding Merged-chr5-37875363-1 chr5 37875263 37875463 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NR_103441) TTS (NR_103441) 1938 NM_001278094 100861519 Hs.536820 NM_001278094 ENSG00000248587 GDNF-AS1 GDNFOS GDNF antisense RNA 1 (head to head) protein-coding Merged-chr6-129744851-1 chr6 129744751 129744951 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -34626 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding Merged-chr22-31107785-1 chr22 31107685 31107885 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_080430) promoter-TSS (NM_080430) -198 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding Merged-chr10-79422670-1 chr10 79422570 79422770 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153367, intron 2 of 3) intron (NM_153367, intron 2 of 3) 22957 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding Merged-chr22-43015257-1 chr22 43015157 43015357 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001184970) promoter-TSS (NM_001184970) -79 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding Merged-chr9-109012491-1 chr9 109012391 109012591 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 1103 NM_001286974 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding Merged-chr8-127949752-1 chr8 127949652 127949852 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) -1029 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 -0 transmembrane protein 75 ncRNA Merged-chr8-124474652-1 chr8 124474552 124474752 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007218) promoter-TSS (NM_007218) -89 NR_108047 101927612 Hs.633137 NR_108047 ENSG00000245149 RNF139-AS1 -0 RNF139 antisense RNA 1 (head to head) ncRNA Merged-chr6-38703168-1 chr6 38703068 38703268 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_006708) promoter-TSS (NM_006708) 8 NM_006708 2739 Hs.268849 NM_006708 ENSG00000124767 GLO1 GLOD1|GLYI|HEL-S-74 glyoxalase I protein-coding Merged-chr17-4909233-1 chr17 4909133 4909333 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -6159 NM_000080 1145 Hs.654535 NM_000080 ENSG00000108556 CHRNE ACHRE|CMS1D|CMS1E|CMS2A|CMS4A|CMS4B|CMS4C|FCCMS|SCCMS cholinergic receptor nicotinic epsilon subunit protein-coding Merged-chr10-103396565-1 chr10 103396465 103396665 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001206426) promoter-TSS (NM_001206426) -52 NM_001206426 84833 Hs.500921 NM_032747 ENSG00000173915 USMG5 DAPIT|HCVFTP2|bA792D24.4 up-regulated during skeletal muscle growth 5 homolog (mouse) protein-coding Merged-chr1-235908997-1 chr1 235908897 235909097 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -25289 NM_001301365 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding Merged-chr11-18634424-1 chr11 18634324 18634524 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_194285) promoter-TSS (NM_194285) 49 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding Merged-chr1-165482330-1 chr1 165482230 165482430 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_026744, intron 6 of 6) intron (NR_026744, intron 6 of 6) -36975 NM_006917 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding Merged-chr5-29732225-1 chr5 29732125 29732325 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MEc|LINE|L1 -148335 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 -0 uncharacterized LOC105374704 ncRNA Merged-chr19-41262504-1 chr19 41262404 41262604 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_144732) promoter-TSS (NM_144732) 28 NM_144732 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding Merged-chr14-31090929-1 chr14 31090829 31091029 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001254728, intron 5 of 5) intron (NM_001254728, intron 5 of 5) 64286 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 sigma 1 subunit protein-coding Merged-chr6-159790342-1 chr6 159790242 159790442 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030752) promoter-TSS (NM_030752) -104 NM_014161 29074 Hs.416998 NM_014161 ENSG00000112110 MRPL18 HSPC071|L18mt|MRP-L18 mitochondrial ribosomal protein L18 protein-coding Merged-chr12-48852256-1 chr12 48852156 48852356 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004818) promoter-TSS (NM_004818) -82 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding Merged-chr1-161389967-1 chr1 161389867 161390067 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -22084 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding Merged-chr3-146161342-1 chr3 146161242 146161442 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_000935, exon 1 of 19) 5' UTR (NM_000935, exon 1 of 19) 153 NM_000935 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding Merged-chr18-22674428-1 chr18 22674328 22674528 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 112409 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 -0 uncharacterized LOC101927571 ncRNA Merged-chr2-48106872-1 chr2 48106772 48106972 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -201079 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding Merged-chr21-36069899-1 chr21 36069799 36069999 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001757) promoter-TSS (NM_001757) -25 NM_001286789 873 Hs.88778 NM_001757 ENSG00000159228 CBR1 CBR|SDR21C1|hCBR1 carbonyl reductase 1 protein-coding Merged-chr8-63220529-1 chr8 63220429 63220629 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 51526 NM_001277818 253943 Hs.491861 NM_152758 ENSG00000185728 YTHDF3 -0 YTH N6-methyladenosine RNA binding protein 3 protein-coding Merged-chrX-16123385-1 chrX 16123285 16123485 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_005314) promoter-TSS (NM_005314) 84 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding Merged-chr6-43627368-1 chr6 43627268 43627468 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286216) promoter-TSS (NM_001286216) -15 NM_001286216 54676 Hs.485449 NM_019096 ENSG00000172432 GTPBP2 -0 GTP binding protein 2 protein-coding Merged-chr14-79045460-1 chr14 79045360 79045560 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330195, intron 15 of 20) intron (NM_001330195, intron 15 of 20) -154522 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 -0 uncharacterized LOC105370586 ncRNA Merged-chr12-49110849-1 chr12 49110749 49110949 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001300750) promoter-TSS (NM_001300750) 51 NM_001300750 55716 Hs.272838 NM_018113 ENSG00000139636 LMBR1L LIMR limb development membrane protein 1 like protein-coding Merged-chr9-96327936-1 chr9 96327836 96328036 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001286990, intron 6 of 8) intron (NM_001286990, intron 6 of 8) -25784 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding Merged-chr20-53899737-1 chr20 53899637 53899837 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -24028 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo Merged-chr6-154928574-1 chr6 154928474 154928674 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 75214 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C -0 microRNA 1273c ncRNA Merged-chr16-2035711-1 chr16 2035611 2035811 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001252076, intron 1 of 5) intron (NM_001252076, intron 1 of 5) 2447 NM_001252075 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding Merged-chr12-126337781-1 chr12 126337681 126337881 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -104700 NR_130748 100128554 Hs.408255 NR_015398 ENSG00000214043 LOC100128554 -0 uncharacterized LOC100128554 ncRNA Merged-chr12-6336489-1 chr12 6336389 6336589 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_144351, intron 1 of 8) intron (NR_144351, intron 1 of 8) 5628 NR_144351 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding Merged-chr19-35879946-1 chr19 35879846 35880046 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt TTS (NM_005166) TTS (NM_005166) 11501 NM_005166 333 Hs.74565 NM_005166 ENSG00000105290 APLP1 APLP amyloid beta precursor like protein 1 protein-coding Merged-chr17-35568061-1 chr17 35567961 35568161 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135479) promoter-TSS (NR_135479) -53 NR_135479 105371743 NR_135479 LINC02001 -0 long intergenic non-protein coding RNA 2001 ncRNA Merged-chr19-29662746-1 chr19 29662646 29662846 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -2674 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding Merged-chr3-66998124-1 chr3 66998024 66998224 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032505) promoter-TSS (NM_032505) -179 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding Merged-chr19-3627100-1 chr19 3627000 3627200 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001080543) promoter-TSS (NM_001080543) -285 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding Merged-chr15-40405704-1 chr15 40405604 40405804 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001159508, exon 1 of 11) 5' UTR (NM_001159508, exon 1 of 11) 219 NM_001159508 3712 Hs.513646 NM_002225 ENSG00000128928 IVD ACAD2 isovaleryl-CoA dehydrogenase protein-coding Merged-chr17-67390830-1 chr17 67390730 67390930 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) 13549 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein, cytoplasmic 1 protein-coding Merged-chr10-93465990-1 chr10 93465890 93466090 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_133337, intron 1 of 52) intron (NM_133337, intron 1 of 52) 16327 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding Merged-chr2-69082861-1 chr2 69082761 69082961 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032208, intron 8 of 17) intron (NM_032208, intron 8 of 17) -20821 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA Merged-chr1-85708529-1 chr1 85708429 85708629 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001170670) promoter-TSS (NM_001170670) -96 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding Merged-chr7-24787117-1 chr7 24787017 24787217 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -29097 NM_001127454 1687 Hs.520708 NM_004403 ENSG00000105928 DFNA5 ICERE-1 DFNA5, deafness associated tumor suppressor protein-coding Merged-chr3-120742634-1 chr3 120742534 120742734 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_173825) promoter-TSS (NM_173825) -77 NM_005513 2960 Hs.445272 NM_005513 ENSG00000153767 GTF2E1 FE|TF2E1|TFIIE-A general transcription factor IIE subunit 1 protein-coding Merged-chr2-120134498-1 chr2 120134398 120134598 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001330310, intron 18 of 24) L1MA3|LINE|L1 88910 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding Merged-chr1-150163345-1 chr1 150163245 150163445 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_135098, intron 1 of 3) intron (NR_135098, intron 1 of 3) 2617 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 -0 uncharacterized LOC105371433 ncRNA Merged-chr19-1095452-1 chr19 1095352 1095552 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001316323) promoter-TSS (NM_001316323) -60 NM_001316324 5434 Hs.24301 NM_002695 ENSG00000099817 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 RNA polymerase II subunit E protein-coding Merged-chr1-63662429-1 chr1 63662329 63662529 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 39213 NM_001172818 5236 Hs.1869 NM_002633 ENSG00000079739 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding Merged-chr22-37512668-1 chr22 37512568 37512768 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014550, intron 3 of 19) intron (NM_014550, intron 3 of 19) 6535 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding Merged-chr16-56451504-1 chr16 56451404 56451604 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007006) promoter-TSS (NM_007006) -8 NM_018233 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding Merged-chr8-52764505-1 chr8 52764405 52764605 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR57-int|LTR|ERVL -50039 NM_014781 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding Merged-chr7-36153012-1 chr7 36152912 36153112 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030636) promoter-TSS (NM_030636) -215 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding Merged-chrX-19847084-1 chrX 19846984 19847184 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031892, intron 1 of 17) intron (NM_031892, intron 1 of 17) 40542 NM_031892 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3 domain containing kinase binding protein 1 protein-coding Merged-chr12-50786997-1 chr12 50786897 50787097 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005171, intron 2 of 6) L1MCc|LINE|L1 22991 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding Merged-chr17-72151833-1 chr17 72151733 72151933 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 30813 NM_000346 6662 Hs.647409 NM_000346 ENSG00000125398 SOX9 CMD1|CMPD1|SRA1|SRXX2|SRXY10 SRY-box 9 protein-coding Merged-chr15-40999320-1 chr15 40999220 40999420 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_017553, intron 28 of 35) MIRb|SINE|MIR 46171 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 -0 ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding Merged-chr10-126247603-1 chr10 126247503 126247703 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288973, intron 3 of 22) intron (NM_001288973, intron 3 of 22) 140955 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding Merged-chr6-84408461-1 chr6 84408361 84408561 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 66468 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA Merged-chr18-48728683-1 chr18 48728583 48728783 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014772, intron 7 of 11) MLT1F|LTR|ERVL-MaLR 58083 NR_039897 100616366 NR_039897 ENSG00000266276 MIR4743 -0 microRNA 4743 ncRNA Merged-chr10-126663577-1 chr10 126663477 126663677 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -142136 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding Merged-chr19-47256958-1 chr19 47256858 47257058 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_015603, intron 1 of 11) CpG 484 NM_015603 26093 Hs.227782 NM_015603 ENSG00000105321 CCDC9 -0 coiled-coil domain containing 9 protein-coding Merged-chr5-38783253-1 chr5 38783153 38783353 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_109951, intron 2 of 3) intron (NR_109951, intron 2 of 3) 62576 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA Merged-chr3-123585179-1 chr3 123585079 123585279 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_121654) promoter-TSS (NR_121654) 6 NM_001329784 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding Merged-chr5-138213348-1 chr5 138213248 138213448 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004661) promoter-TSS (NM_004661) -5 NM_004661 8697 Hs.73625 NM_004661 ENSG00000094880 CDC23 ANAPC8|APC8|CUT23 cell division cycle 23 protein-coding Merged-chr11-66311880-1 chr11 66311780 66311980 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG 5164 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding Merged-chr17-56163322-1 chr17 56163222 56163422 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_153228, intron 1 of 16) intron (NM_153228, intron 1 of 16) 9847 NM_153228 162282 Hs.673040 NM_153228 ENSG00000153930 ANKFN1 -0 ankyrin repeat and fibronectin type III domain containing 1 protein-coding Merged-chr2-69829547-1 chr2 69829447 69829647 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178439) promoter-TSS (NM_178439) -59 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less, spermatogenesis associated 1 protein-coding Merged-chr11-17077759-1 chr11 17077659 17077859 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017) promoter-TSS (NM_001017) -86 NM_001017 6207 Hs.446588 NM_001017 ENSG00000110700 RPS13 S13 ribosomal protein S13 protein-coding Merged-chr16-31033540-1 chr16 31033440 31033640 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001272095) promoter-TSS (NM_001272095) 49 NM_001272095 6810 Hs.83734 NM_004604 ENSG00000103496 STX4 STX4A|p35-2 syntaxin 4 protein-coding Merged-chr7-108526284-1 chr7 108526184 108526384 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015723) promoter-TSS (NM_015723) 34 NM_001256008 50640 Hs.617340 NM_015723 ENSG00000135241 PNPLA8 IPLA2-2|IPLA2G|MMLA|PNPLA-gamma|iPLA2gamma patatin like phospholipase domain containing 8 protein-coding Merged-chr17-2407096-1 chr17 2406996 2407196 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_028335, exon 3 of 3) non-coding (NR_028335, exon 3 of 3) -6132 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding Merged-chr19-35995160-1 chr19 35995060 35995260 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001042631) promoter-TSS (NM_001042631) -28 NM_001042631 644096 Hs.356460 NM_001042631 ENSG00000205138 SDHAF1 LYRM8 succinate dehydrogenase complex assembly factor 1 protein-coding Merged-chrX-23807432-1 chrX 23807332 23807532 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 24274 NR_027783 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding Merged-chr2-197516010-1 chr2 197515910 197516110 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001100819) promoter-TSS (NM_001100819) -33 NM_001100819 25843 Hs.633165 NM_015387 ENSG00000115540 MOB4 2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4 phocein protein-coding Merged-chr1-9491151-1 chr1 9491051 9491251 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -48318 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding Merged-chr17-69779896-1 chr17 69779796 69779996 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_109972, intron 3 of 4) MLT2B3|LTR|ERVL -181811 NR_110874 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 -0 long intergenic non-protein coding RNA 1497 ncRNA Merged-chr11-69867846-1 chr11 69867746 69867946 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -48422 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding Merged-chr21-35256694-1 chr21 35256594 35256794 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -207396 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha runt related transcription factor 1 protein-coding Merged-chr5-87412998-1 chr5 87412898 87413098 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001199189) promoter-TSS (NM_001199189) 35 NM_001239 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding Merged-chr17-2711857-1 chr17 2711757 2711957 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_136412) promoter-TSS (NR_136412) -224 NM_015229 23277 Hs.22616 NM_015229 ENSG00000132361 CLUH CLU1|KIAA0664 clustered mitochondria homolog protein-coding Merged-chr19-48363292-1 chr19 48363192 48363392 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001303538, exon 2 of 7) exon (NM_001303538, exon 2 of 7) 945 NM_001303539 55260 Hs.351335 NM_018273 ENSG00000161558 TMEM143 -0 transmembrane protein 143 protein-coding Merged-chr6-170438563-1 chr6 170438463 170438663 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 107802 NR_039787 100616430 NR_039787 ENSG00000266245 MIR4644 -0 microRNA 4644 ncRNA Merged-chr5-139262819-1 chr5 139262719 139262919 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -10933 NM_001282278 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding Merged-chr20-62238273-1 chr20 62238173 62238373 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001278649) promoter-TSS (NM_001278649) -212 NM_014835 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding Merged-chr20-43955642-1 chr20 43955542 43955742 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_032883, intron 2 of 9) intron (NM_032883, intron 2 of 9) 9746 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding Merged-chr8-98117253-1 chr8 98117153 98117353 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_015029) promoter-TSS (NM_015029) -40 NM_001145860 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 -0 POP1 homolog, ribonuclease P/MRP subunit protein-coding Merged-chr1-226821459-1 chr1 226821359 226821559 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -49113 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding Merged-chr5-33266342-1 chr5 33266242 33266442 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic LTR33|LTR|ERVL -174354 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding Merged-chr5-147628269-1 chr5 147628169 147628369 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_014790, intron 16 of 20) intron (NM_014790, intron 16 of 20) 68275 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 -0 JAKMIP2 antisense RNA 1 ncRNA Merged-chr2-46955265-1 chr2 46955165 46955365 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_020458, intron 2 of 19) intron (NM_020458, intron 2 of 19) -13410 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding Merged-chr17-7688327-1 chr17 7688227 7688427 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_000546) promoter-TSS (NM_000546) -22 NM_018081 55135 Hs.408312 NM_018081 ENSG00000141499 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing antisense to TP53 protein-coding Merged-chr17-45305694-1 chr17 45305594 45305794 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_003954, intron 1 of 15) intron (NM_003954, intron 1 of 15) 11370 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding Merged-chr15-55197070-1 chr15 55196970 55197170 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016304) promoter-TSS (NM_016304) -37 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding Merged-chr8-140464872-1 chr8 140464772 140464972 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -6293 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding Merged-chr15-69452776-1 chr15 69452676 69452876 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001003) promoter-TSS (NM_001003) -44 NM_213725 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding Merged-chr12-56224358-1 chr12 56224258 56224458 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024068) promoter-TSS (NM_024068) 17 NM_024068 79035 Hs.240170 NM_024068 ENSG00000139579 NABP2 OBFC2B|SOSS-B1|SSB1|hSSB1 nucleic acid binding protein 2 protein-coding Merged-chr14-68544444-1 chr14 68544344 68544544 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001321818, intron 10 of 10) AmnSINE1|SINE|5S-Deu-L2 84343 NR_135816 100996664 NR_135816 LOC100996664 -0 uncharacterized LOC100996664 ncRNA Merged-chr20-50980445-1 chr20 50980345 50980545 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 21631 NM_014484 27304 Hs.159410 NM_014484 ENSG00000124217 MOCS3 UBA4 molybdenum cofactor synthesis 3 protein-coding Merged-chr3-51942057-1 chr3 51941957 51942157 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004704) promoter-TSS (NM_004704) -116 NM_004704 9136 Hs.153768 NM_004704 ENSG00000114767 RRP9 RNU3IP2|U3-55K ribosomal RNA processing 9 small subunit (SSU) processome component, homolog (yeast) protein-coding Merged-chr3-138390497-1 chr3 138390397 138390597 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012219, intron 2 of 5) intron (NM_012219, intron 2 of 5) 41369 NM_001252090 22808 Hs.527021 NM_012219 ENSG00000158186 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding Merged-chr10-18659230-1 chr10 18659130 18659330 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_178815) promoter-TSS (NM_178815) -154 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding Merged-chr17-41027161-1 chr17 41027061 41027261 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031957) promoter-TSS (NM_031957) 41 NM_031957 83895 Hs.534499 NM_031957 ENSG00000221852 KRTAP1-5 KAP1.5|KRTAP1.5 keratin associated protein 1-5 protein-coding Merged-chr6-38131717-1 chr6 38131617 38131817 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_021943, intron 5 of 5) intron (NM_021943, intron 5 of 5) 312186 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding Merged-chr19-3500978-1 chr19 3500878 3501078 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_031304) promoter-TSS (NM_031304) -38 NM_001145165 83475 Hs.515064 NM_031304 ENSG00000129932 DOHH HLRC1|hDOHH deoxyhypusine hydroxylase/monooxygenase protein-coding Merged-chr10-102743787-1 chr10 102743687 102743887 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001083913) promoter-TSS (NM_001083913) -183 NM_001083913 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1-like protein-coding Merged-chr10-70364649-1 chr10 70364549 70364749 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_103468, intron 1 of 2) intron (NR_103468, intron 1 of 2) 12130 NM_001278213 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 -0 leucine rich repeat containing 20 protein-coding Merged-chr2-28276269-1 chr2 28276169 28276369 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_137440, intron 10 of 13) intron (NR_137440, intron 10 of 13) 34190 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 -0 uncharacterized LOC100505716 ncRNA Merged-chr7-23299240-1 chr7 23299140 23299340 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_138446) promoter-TSS (NM_138446) -81 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding Merged-chr2-47199275-1 chr2 47199175 47199375 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NR_110208, intron 4 of 4) intron (NR_110208, intron 4 of 4) -22339 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CAMII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding Merged-chr15-72226780-1 chr15 72226680 72226880 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001206798, intron 1 of 10) intron (NM_001206798, intron 1 of 10) 2942 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase, muscle protein-coding Merged-chr8-30083105-1 chr8 30083005 30083205 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 5' UTR (NM_001284239, exon 1 of 5) 5' UTR (NM_001284239, exon 1 of 5) 103 NM_016127 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding Merged-chr20-37694008-1 chr20 37693908 37694108 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001281495) promoter-TSS (NM_001281495) 53 NM_030877 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding Merged-chr17-50037885-1 chr17 50037785 50037985 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 17854 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 LOC284080 -0 uncharacterized LOC284080 ncRNA Merged-chr18-62522867-1 chr18 62522767 62522967 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_017742) promoter-TSS (NM_017742) -558 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding Merged-chr17-48916085-1 chr17 48915985 48916185 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_023079, exon 4 of 7) exon (NM_023079, exon 4 of 7) -7102 NR_135674 105371814 Hs.655254 NR_135674 ENSG00000248278 LOC105371814 -0 uncharacterized LOC105371814 ncRNA Merged-chr15-75104923-1 chr15 75104823 75105023 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic L1MEg|LINE|L1 61654 NM_001301105 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding Merged-chr10-103895696-1 chr10 103895596 103895796 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024928, intron 7 of 9) intron (NM_024928, intron 7 of 9) 22591 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1, CST complex subunit protein-coding Merged-chr14-92540793-1 chr14 92540693 92540893 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 27012 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 -0 Ras and Rab interactor 3 protein-coding Merged-chr19-41364147-1 chr19 41364047 41364247 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_030578) promoter-TSS (NM_030578) 26 NM_030578 80776 Hs.567596 NM_030578 ENSG00000123810 B9D2 ICIS-1|MKS10|MKSR2 B9 protein domain 2 protein-coding Merged-chr2-33599412-1 chr2 33599312 33599512 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001304538) promoter-TSS (NM_001304538) -50 NM_015475 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A -0 family with sequence similarity 98 member A protein-coding Merged-chr2-239401251-1 chr2 239401151 239401351 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_135575) promoter-TSS (NR_135575) -185 NR_135575 101928111 Hs.534680 NR_135575 ENSG00000222020 LOC101928111 -0 uncharacterized LOC101928111 ncRNA Merged-chr9-131678609-1 chr9 131678509 131678709 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 31233 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding Merged-chr11-62123842-1 chr11 62123742 62123942 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001040694) promoter-TSS (NM_001040694) -131 NM_001040694 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP -0 inner centromere protein protein-coding Merged-chr9-133135450-1 chr9 133135350 133135550 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -4293 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding Merged-chr6-53794439-1 chr6 53794339 53794539 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018214) promoter-TSS (NM_018214) -541 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding Merged-chr19-55385478-1 chr19 55385378 55385578 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001136136) promoter-TSS (NM_001136136) -454 NM_001136135 6158 Hs.652114 NM_000991 ENSG00000108107 RPL28 L28 ribosomal protein L28 protein-coding Merged-chr19-12938469-1 chr19 12938369 12938569 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_004343) promoter-TSS (NM_004343) -131 NM_004343 811 Hs.515162 NM_004343 ENSG00000179218 CALR CRT|HEL-S-99n|RO|SSA|cC1qR calreticulin protein-coding Merged-chr17-50055824-1 chr17 50055724 50055924 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_038230) promoter-TSS (NR_038230) -85 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 LOC284080 -0 uncharacterized LOC284080 ncRNA Merged-chr19-44890522-1 chr19 44890422 44890622 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001128916) promoter-TSS (NM_001128916) -698 NM_001128917 10452 Hs.655909 NM_006114 ENSG00000130204 TOMM40 C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 translocase of outer mitochondrial membrane 40 protein-coding Merged-chr1-156728828-1 chr1 156728728 156728928 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001303095) promoter-TSS (NM_001303095) 357 NM_001142560 51093 Hs.512597 NM_015997 ENSG00000143303 RRNAD1 C1orf66|CGI-41|METTL25B ribosomal RNA adenine dimethylase domain containing 1 protein-coding Merged-chr8-130762349-1 chr8 130762249 130762449 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 278240 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding Merged-chr8-22987100-1 chr8 22987000 22987200 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001160036) promoter-TSS (NM_001160036) -317 NM_001160036 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2 Rho related BTB domain containing 2 protein-coding Merged-chr21-38831605-1 chr21 38831505 38831705 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 25774 NM_005239 2114 Hs.644231 NM_005239 ENSG00000157557 ETS2 ETS2IT1 ETS proto-oncogene 2 transcription factor protein-coding Merged-chr3-124860706-1 chr3 124860606 124860806 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_002213, intron 2 of 14) intron (NM_002213, intron 2 of 14) 26599 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 -0 integrin subunit beta 5 protein-coding Merged-chr17-81553227-1 chr17 81553127 81553327 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025161) promoter-TSS (NM_025161) -824 NM_025161 80233 Hs.313905 NM_025161 ENSG00000185504 FAAP100 C17orf70 Fanconi anemia core complex associated protein 100 protein-coding Merged-chr14-89954805-1 chr14 89954705 89954905 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001284269) promoter-TSS (NM_001284269) -28 NM_145231 90141 Hs.123232 NM_145231 ENSG00000140025 EFCAB11 C14orf143 EF-hand calcium binding domain 11 protein-coding Merged-chr12-96237952-1 chr12 96237852 96238052 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -17508 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ELK3, ETS transcription factor protein-coding Merged-chr1-8986300-1 chr1 8986200 8986400 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 40045 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT7 solute carrier family 2 member 7 protein-coding Merged-chr17-68512401-1 chr17 68512301 68512501 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001276289) promoter-TSS (NM_001276289) 22 NM_212472 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding Merged-chr1-109263738-1 chr1 109263638 109263838 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt exon (NM_001408, exon 9 of 34) exon (NM_001408, exon 9 of 34) 13719 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding Merged-chr4-74374714-1 chr4 74374614 74374814 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001432, intron 1 of 4) AmnSINE1|SINE|5S-Deu-L2 9571 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding Merged-chr19-1040071-1 chr19 1039971 1040171 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_019112) promoter-TSS (NM_019112) -32 NM_019112 10347 Hs.134514 NM_019112 ENSG00000064687 ABCA7 ABCA-SSN|ABCX|AD9 ATP binding cassette subfamily A member 7 protein-coding Merged-chr11-67033894-1 chr11 67033794 67033994 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001318773, intron 3 of 8) intron (NM_001318773, intron 3 of 8) 10549 NM_001318775 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding Merged-chr12-121888653-1 chr12 121888553 121888753 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001171993) promoter-TSS (NM_001171993) -42 NM_001171993 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding Merged-chr15-44663730-1 chr15 44663630 44663830 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_025137) promoter-TSS (NM_025137) -52 NM_025137 80208 Hs.656271 NM_025137 ENSG00000104133 SPG11 ALS5|CMT2X|KIAA1840 spastic paraplegia 11 (autosomal recessive) protein-coding Merged-chr18-57630334-1 chr18 57630234 57630434 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001242804) promoter-TSS (NM_001242804) 32 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 -0 uncharacterized LOC100505549 protein-coding Merged-chr8-9002729-1 chr8 9002629 9002829 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_153332) promoter-TSS (NM_153332) -75 NM_153332 90459 Hs.20000 NM_153332 ENSG00000104626 ERI1 3'HEXO|HEXO|THEX1 exoribonuclease 1 protein-coding Merged-chr10-49539062-1 chr10 49538962 49539162 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001277058) promoter-TSS (NM_001277058) 61 NM_001346440 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|POF11|RAD26|UVSS1 ERCC excision repair 6 chromatin remodeling factor protein-coding Merged-chr18-36129888-1 chr18 36129788 36129988 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_012319) promoter-TSS (NM_012319) 14 NR_040110 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding Merged-chr17-64991146-1 chr17 64991046 64991246 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1A|LTR|ERVL-MaLR -15561 NR_026903 201283 Hs.396447 NM_153032 ENSG00000214174 AMZ2P1 -0 archaelysin family metallopeptidase 2 pseudogene 1 pseudo Merged-chr1-54280931-1 chr1 54280831 54281031 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_145716, intron 5 of 17) intron (NM_145716, intron 5 of 17) 44488 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA Merged-chr4-168585736-1 chr4 168585636 168585836 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_016081, intron 2 of 20) intron (NM_016081, intron 2 of 20) -45881 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding Merged-chr22-36124106-1 chr22 36124006 36124206 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 36823 NM_145640 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding Merged-chr9-121558132-1 chr9 121558032 121558232 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -8970 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding Merged-chr1-201114256-1 chr1 201114156 201114356 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001270601, exon 1 of 1) 3' UTR (NM_001270601, exon 1 of 1) 1116 NM_001270601 647219 Hs.143949 NM_001270601 ENSG00000232237 ASCL5 bHLHa47 achaete-scute family bHLH transcription factor 5 protein-coding Merged-chr9-109816668-1 chr9 109816568 109816768 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_147150, intron 1 of 9) L2|LINE|L2 36371 NM_007203 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP2 PALM2-AKAP2 readthrough protein-coding Merged-chr1-13828030-1 chr1 13827930 13828130 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 78649 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding Merged-chr1-167936136-1 chr1 167936036 167936236 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001017977) promoter-TSS (NM_001017977) 65 NR_026550 25874 Hs.517768 NM_015415 ENSG00000143158 MPC2 BRP44 mitochondrial pyruvate carrier 2 protein-coding Merged-chr1-32142900-1 chr1 32142800 32143000 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 34857 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding Merged-chr9-99353559-1 chr9 99353459 99353659 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MER58A|DNA|hAT-Charlie 21698 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA -0 non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA Merged-chr16-84836325-1 chr16 84836225 84836425 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_031476, intron 1 of 14) intron (NM_031476, intron 1 of 14) 16344 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding Merged-chr2-120252729-1 chr2 120252629 120252829 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002881) promoter-TSS (NM_002881) -109 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB -0 RAS like proto-oncogene B protein-coding Merged-chr19-14006413-1 chr19 14006313 14006513 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002918) promoter-TSS (NM_002918) -91 NM_002918 5989 Hs.655215 NM_002918 ENSG00000132005 RFX1 EFC|RFX regulatory factor X1 protein-coding Merged-chr5-98929075-1 chr5 98928975 98929175 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036530) promoter-TSS (NR_036530) -59 NR_036530 100289230 Hs.552095 NR_036530 LOC100289230 -0 uncharacterized LOC100289230 ncRNA Merged-chr8-140512018-1 chr8 140511918 140512118 0 4.250000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_040712) promoter-TSS (NR_040712) 36 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex 1 protein-coding Merged-chr15-59622556-1 chr15 59622456 59622656 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 10773 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3 mucin type protein-coding Merged-chr10-71865944-1 chr10 71865844 71866044 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MIR3|SINE|MIR -14569 NM_001042466 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding Merged-chr13-74043793-1 chr13 74043693 74043893 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 90136 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding Merged-chr7-38178144-1 chr7 38178044 38178244 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_032016) promoter-TSS (NM_032016) -62 NM_032016 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding Merged-chr19-13952139-1 chr19 13952039 13952239 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_138353) promoter-TSS (NM_138353) -335 NM_138353 90379 Hs.443636 NM_138353 ENSG00000132017 DCAF15 C19orf72 DDB1 and CUL4 associated factor 15 protein-coding Merged-chr9-131373470-1 chr9 131373370 131373570 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic CpG -56620 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding Merged-chr2-64839017-1 chr2 64838917 64839117 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 24614 NR_110224 101927438 Hs.580313 NR_110224 ENSG00000234572 LINC01800 -0 long intergenic non-protein coding RNA 1800 ncRNA Merged-chr19-51108546-1 chr19 51108446 51108646 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_145232) promoter-TSS (NM_145232) -156 NM_145232 90353 Hs.148425 NM_145232 ENSG00000142544 CTU1 ATPBD3|NCS6 cytosolic thiouridylase subunit 1 protein-coding Merged-chr19-27384129-1 chr19 27384029 27384229 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic ALR/Alpha|Satellite|centr -409338 NR_110688 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 -0 uncharacterized LOC101927151 ncRNA Merged-chr1-8197901-1 chr1 8197801 8198001 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -10771 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 -0 long intergenic non-protein coding RNA 1714 ncRNA Merged-chr2-148645321-1 chr2 148645221 148645421 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_015630, intron 1 of 13) CpG 330 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding Merged-chr8-133182702-1 chr8 133182602 133182802 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic MER5A|DNA|hAT-Charlie -8337 NM_080838 8840 Hs.492974 NM_003882 ENSG00000104415 WISP1 CCN4|WISP1c|WISP1i|WISP1tc WNT1 inducible signaling pathway protein 1 protein-coding Merged-chr10-8164533-1 chr10 8164433 8164633 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 103772 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Merged-chr3-150469847-1 chr3 150469747 150469947 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic 61512 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding Merged-chr20-31572964-1 chr20 31572864 31573064 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NR_046853, intron 1 of 2) intron (NR_046853, intron 1 of 2) 299 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 -0 HM13 antisense RNA 1 ncRNA Merged-chr16-74455347-1 chr16 74455247 74455447 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_012201, intron 25 of 26) intron (NM_012201, intron 25 of 26) -33877 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding Merged-chr1-18949034-1 chr1 18948934 18949134 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 7298 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 -0 intermediate filament family orphan 2 protein-coding Merged-chr5-35026475-1 chr5 35026375 35026575 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt exon (NM_031900, exon 8 of 14) exon (NM_031900, exon 8 of 14) 21660 NM_031900 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding Merged-chr3-171407971-1 chr3 171407871 171408071 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001161560, intron 1 of 31) intron (NM_001161560, intron 1 of 31) 52437 NM_001161564 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding Merged-chr17-55287308-1 chr17 55287208 55287408 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001330375, intron 2 of 3) intron (NM_001330375, intron 2 of 3) 21086 NM_001330375 3131 Hs.196952 NM_002126 ENSG00000108924 HLF -0 HLF, PAR bZIP transcription factor protein-coding Merged-chr1-117093447-1 chr1 117093347 117093547 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_003594, intron 18 of 22) intron (NM_003594, intron 18 of 22) -1196 NR_030640 100126331 NR_030640 ENSG00000215930 MIR942 MIRN942|hsa-mir-942|mir-942 microRNA 942 ncRNA Merged-chr1-24392519-1 chr1 24392419 24392619 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_001199014, intron 2 of 9) LTR52|LTR|ERVL -20968 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding Merged-chr17-16286141-1 chr17 16286041 16286241 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_004278, intron 2 of 6) intron (NM_004278, intron 2 of 6) 4127 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA Merged-chr3-99129340-1 chr3 99129240 99129440 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -227651 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding Merged-chr9-110029521-1 chr9 110029421 110029621 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt intron (NM_147150, intron 7 of 9) intron (NM_147150, intron 7 of 9) -19077 NM_001004065 11217 Hs.591908 NM_001004065 ENSG00000241978 AKAP2 AKAP-2|AKAPKL|MISP2|PRKA2 A-kinase anchoring protein 2 protein-coding Merged-chr19-49640732-1 chr19 49640632 49640832 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_006270) promoter-TSS (NM_006270) -589 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS -0 related RAS viral (r-ras) oncogene homolog protein-coding Merged-chr1-27490344-1 chr1 27490244 27490444 0 4.200000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001201404) promoter-TSS (NM_001201404) -157 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WAS protein family member 2 protein-coding Merged-chr16-75556296-1 chr16 75556196 75556396 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001077416) promoter-TSS (NM_001077416) -10 NM_001077418 79583 Hs.156784 NM_001077416 ENSG00000205084 TMEM231 ALYE870|JBTS20|MKS11|PRO1886 transmembrane protein 231 protein-coding Merged-chr15-70492938-1 chr15 70492838 70493038 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 93668 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LOC101929151 -0 uncharacterized LOC101929151 ncRNA Merged-chr3-50359588-1 chr3 50359488 50359688 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_007024) promoter-TSS (NM_007024) -80 NM_007024 11070 Hs.91566 NM_007024 ENSG00000126062 TMEM115 PL6 transmembrane protein 115 protein-coding Merged-chr19-45731004-1 chr19 45730904 45731104 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001080469) promoter-TSS (NM_001080469) -111 NM_001080469 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding Merged-chr5-150320292-1 chr5 150320192 150320392 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic MLT1I|LTR|ERVL-MaLR -17330 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding Merged-chr12-49130822-1 chr12 49130722 49130922 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006082, intron 1 of 3) CpG 699 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding Merged-chr19-3429765-1 chr19 3429665 3429865 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_005597, intron 3 of 8) L2b|LINE|L2 50777 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding Merged-chr1-85276567-1 chr1 85276467 85276667 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt non-coding (NR_045484, exon 1 of 2) non-coding (NR_045484, exon 1 of 2) 209 NR_045484 646626 Hs.193516 NR_045484 LOC646626 -0 uncharacterized LOC646626 ncRNA Merged-chr11-62665216-1 chr11 62665116 62665316 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001286086) promoter-TSS (NM_001286086) 0 NR_104414 102288414 Hs.9061 NM_001286086 ENSG00000278615 C11orf98 C11orf48 chromosome 11 open reading frame 98 protein-coding Merged-chr16-30527535-1 chr16 30527435 30527635 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_024671) promoter-TSS (NM_024671) -946 NM_024671 79724 Hs.85658 NM_024671 ENSG00000169957 ZNF768 -0 zinc finger protein 768 protein-coding Merged-chr2-173184432-1 chr2 173184332 173184532 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_133646, intron 4 of 11) intron (NM_133646, intron 4 of 11) 97604 NR_033882 339751 Hs.570083 NR_033882 ENSG00000238133 MAP3K20-AS1 MLK7-AS1 MAP3K20 antisense RNA 1 ncRNA Merged-chr6-36594282-1 chr6 36594182 36594382 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_036610) promoter-TSS (NR_036610) -31 NR_036610 6428 Hs.405144 NM_003017 ENSG00000112081 SRSF3 SFRS3|SRp20 serine and arginine rich splicing factor 3 protein-coding Merged-chr10-113087474-1 chr10 113087374 113087574 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001198531, intron 5 of 12) intron (NM_001198531, intron 5 of 12) 42119 NR_132769 106635520 NR_132769 SNORA87 -0 small nucleolar RNA, H/ACA box 87 snoRNA Merged-chr5-150497846-1 chr5 150497746 150497946 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001301063) promoter-TSS (NM_001301063) 68 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding Merged-chr1-23100413-1 chr1 23100313 23100513 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001142546, intron 2 of 3) intron (NM_001142546, intron 2 of 3) -42479 NR_039614 100616177 NR_039614 ENSG00000266802 MIR4419A -0 microRNA 4419a ncRNA Merged-chr4-151099497-1 chr4 151099397 151099597 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001006) promoter-TSS (NM_001006) -76 NM_001006 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding Merged-chr11-67317803-1 chr11 67317703 67317903 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_024469) promoter-TSS (NR_024469) -36 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 -0 uncharacterized LOC100130987 ncRNA Merged-chr17-77124378-1 chr17 77124278 77124478 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001204408, intron 3 of 19) AluJb|SINE|Alu -16545 NM_001039573 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding Merged-chr10-110398857-1 chr10 110398757 110398957 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -93908 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding Merged-chr1-39982133-1 chr1 39982033 39982233 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 27021 NM_032793 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding Merged-chr11-28343521-1 chr11 28343421 28343621 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 134027 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA Merged-chr19-49869775-1 chr19 49869675 49869875 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_001278159, exon 5 of 5) 3' UTR (NM_001278159, exon 5 of 5) -2210 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding Merged-chr14-77098092-1 chr14 77097992 77098192 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_033426) promoter-TSS (NM_033426) -143 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding Merged-chr16-31094902-1 chr16 31094802 31095002 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001311311) promoter-TSS (NM_001311311) 97 NM_001311311 79001 Hs.324844 NM_024006 ENSG00000167397 VKORC1 EDTP308|MST134|MST576|VKCFD2|VKOR vitamin K epoxide reductase complex subunit 1 protein-coding Merged-chr3-177802167-1 chr3 177802067 177802267 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -14698 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA Merged-chr10-126199540-1 chr10 126199440 126199640 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001288973, intron 3 of 22) intron (NM_001288973, intron 3 of 22) 189018 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding Merged-chr4-119213177-1 chr4 119213077 119213277 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125931) promoter-TSS (NR_125931) -533 NR_125931 101929762 Hs.570735 NR_125931 LOC101929762 -0 uncharacterized LOC101929762 ncRNA Merged-chr6-154474885-1 chr6 154474785 154474985 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_173515, intron 1 of 12) intron (NM_173515, intron 1 of 12) 35734 NM_173515 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 MAGI1 CNKSR family member 3 protein-coding Merged-chr14-92106680-1 chr14 92106580 92106780 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_028458) promoter-TSS (NR_028458) -59 NR_028453 4287 Hs.532632 NM_004993 ENSG00000066427 ATXN3 AT3|ATX3|JOS|MJD|MJD1|SCA3 ataxin 3 protein-coding Merged-chr17-8435802-1 chr17 8435702 8435902 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001025579) promoter-TSS (NM_001025579) -50 NM_001025579 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding Merged-chr16-27326972-1 chr16 27326872 27327072 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001257406, intron 1 of 9) intron (NM_001257406, intron 1 of 9) 13063 NM_001257406 3566 Hs.513457 NM_000418 ENSG00000077238 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding Merged-chr2-96740138-1 chr2 96740038 96740238 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_001322351) promoter-TSS (NM_001322351) -46 NM_001322354 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding Merged-chr17-40322940-1 chr17 40322840 40323040 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001145302, intron 1 of 6) intron (NM_001145302, intron 1 of 6) 4719 NM_001145301 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding Merged-chr22-45609093-1 chr22 45608993 45609193 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -3446 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA Merged-chr12-12813339-1 chr12 12813239 12813439 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_016355) promoter-TSS (NM_016355) -7 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding Merged-chr14-71143506-1 chr14 71143406 71143606 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 236101 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex homolog 1 (Drosophila) protein-coding Merged-chr17-40521783-1 chr17 40521683 40521883 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -20181 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding Merged-chr19-48993392-1 chr19 48993292 48993492 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_002103) promoter-TSS (NM_002103) -39 NM_001161587 2997 Hs.386225 NM_002103 ENSG00000104812 GYS1 GSY|GYS glycogen synthase 1 protein-coding Merged-chr8-73356661-1 chr8 73356561 73356761 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_125388) promoter-TSS (NR_125388) -200 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 -0 RDH10 antisense RNA 1 ncRNA Merged-chr17-42407662-1 chr17 42407562 42407762 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012232, intron 1 of 1) intron (NM_012232, intron 1 of 1) 15658 NM_012232 284119 Hs.437191 NM_012232 ENSG00000177469 PTRF CAVIN|CAVIN1|CGL4|FKSG13|cavin-1 polymerase I and transcript release factor protein-coding Merged-chr1-112575606-1 chr1 112575506 112575706 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_138729, intron 11 of 13) MER44B|DNA|TcMar-Tigger 43533 NM_001308264 54879 Hs.201921 NM_017744 ENSG00000007341 ST7L FAM4B|ST7R|STLR suppression of tumorigenicity 7 like protein-coding Merged-chr1-17233254-1 chr1 17233154 17233354 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_013358, intron 11 of 15) Charlie8|DNA|hAT-Charlie -15844 NM_016233 51702 Hs.149195 NM_016233 ENSG00000142619 PADI3 PAD3|PDI3 peptidyl arginine deiminase 3 protein-coding Merged-chr7-873522-1 chr7 873422 873622 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt 3' UTR (NM_025154, exon 18 of 18) 3' UTR (NM_025154, exon 18 of 18) -3032 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 golgi to ER traffic protein 4 protein-coding Merged-chr7-77798560-1 chr7 77798460 77798660 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_032936) promoter-TSS (NM_032936) -130 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding Merged-chr17-78330850-1 chr17 78330750 78330950 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 29229 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding Merged-chr18-50357399-1 chr18 50357299 50357499 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -17623 NM_145060 220134 Hs.134726 NM_145060 ENSG00000154839 SKA1 C18orf24 spindle and kinetochore associated complex subunit 1 protein-coding Merged-chr17-13018083-1 chr17 13017983 13018183 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NM_018127) promoter-TSS (NM_018127) -19 NM_001165962 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding Merged-chr3-127791327-1 chr3 127791227 127791427 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 31555 NM_007283 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding Merged-chrX-12008111-1 chrX 12008011 12008211 0 3.950000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -130355 NM_014728 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding Merged-chr4-137562062-1 chr4 137561962 137562162 0 3.880000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -29564 NM_001300828 54510 Hs.591691 NM_019035 ENSG00000189184 PCDH18 PCDH68L protocadherin 18 protein-coding Merged-chr20-36605683-1 chr20 36605583 36605783 0 3.880000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001199534) promoter-TSS (NM_001199534) -51 NM_001199534 55969 Hs.584985 NM_018840 ENSG00000101084 C20orf24 PNAS-11|RIP5 chromosome 20 open reading frame 24 protein-coding Merged-chr17-29591950-1 chr17 29591850 29592050 0 3.880000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -1559 NM_152345 124930 Hs.662164 NM_152345 ENSG00000198720 ANKRD13B -0 ankyrin repeat domain 13B protein-coding Merged-chrX-13087782-1 chrX 13087682 13087882 0 3.880000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt Intergenic Intergenic -42984 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding Merged-chr5-168579764-1 chr5 168579664 168579864 0 3.880000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_024594) promoter-TSS (NM_024594) -155 NM_024594 79646 Hs.388400 NM_024594 ENSG00000120137 PANK3 -0 pantothenate kinase 3 protein-coding Merged-chr5-42994473-1 chr5 42994373 42994573 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic -1140 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 -0 uncharacterized LOC643977 ncRNA Merged-chr1-150515740-1 chr1 150515640 150515840 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt promoter-TSS (NR_051960) promoter-TSS (NR_051960) -17 NR_051960 100874054 Hs.576460 NR_051960 ENSG00000228126 FALEC FAL1|LINC00568|ncRNA-a1 focally amplified long non-coding RNA in epithelial cancer ncRNA Merged-chr2-236770188-1 chr2 236770088 236770288 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic Intergenic 200451 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding Merged-chr8-140464518-1 chr8 140464418 140464618 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt Intergenic CpG -5939 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding Merged-chr6-158642470-1 chr6 158642370 158642570 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_006519, intron 1 of 4) intron (NM_006519, intron 1 of 4) 2316 NM_006519 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding Merged-chr17-73291678-1 chr17 73291578 73291778 0 3.640000 GS404_IP_BG4_93T_m1_F2L0_peaks.txt intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 20326 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding Merged-chr6-136250433-1 chr6 136250333 136250533 0 3.560000 GS430_IP_BG4_93T_rep2_m1_F2L0_peaks.txt promoter-TSS (NM_001099286) promoter-TSS (NM_001099286) -98 NM_001318738 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding