2023-02-21 02:42:14,710 Running colabfold 1.6.0 (f20a7e3cc0f2487c44335dc7281adf4cbc5aef3f)
2023-02-21 02:42:40,441 Running colabfold 1.6.0 (f20a7e3cc0f2487c44335dc7281adf4cbc5aef3f)
2023-02-21 02:42:40,557 Running on GPU
2023-02-21 02:42:40,931 Found 4 citations for tools or databases
2023-02-21 02:42:40,931 Query 1/80: 6dny (length 4)
2023-02-21 02:42:41,591 Sleeping for 10s. Reason: PENDING
2023-02-21 02:42:57,507 Padding length to 14
2023-02-21 02:43:06,749 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.2 pTM=0.0923
2023-02-21 02:43:07,485 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=13.1 pTM=0.000238 tol=2.38
2023-02-21 02:43:08,221 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=48.2 pTM=0.000227 tol=24.1
2023-02-21 02:43:08,957 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=25.1 pTM=0.000332 tol=12.6
2023-02-21 02:43:08,957 alphafold2_ptm_model_1_seed_000 took 11.4s (3 recycles)
2023-02-21 02:43:09,701 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71 pTM=0.091
2023-02-21 02:43:10,441 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=35.2 pTM=0.075 tol=3.15
2023-02-21 02:43:11,177 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=34.6 pTM=0.000285 tol=37.8
2023-02-21 02:43:11,913 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=33.5 pTM=0.000252 tol=20.9
2023-02-21 02:43:11,913 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:12,651 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=73.1 pTM=0.0919
2023-02-21 02:43:13,387 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=64.5 pTM=0.0871 tol=0.898
2023-02-21 02:43:14,123 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=61.3 pTM=0.0875 tol=1.24
2023-02-21 02:43:14,859 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.8 pTM=0.0871 tol=0.931
2023-02-21 02:43:14,859 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 02:43:15,597 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=73.9 pTM=0.0923
2023-02-21 02:43:16,333 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=38.2 pTM=0.0807 tol=1.89
2023-02-21 02:43:17,069 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=42.8 pTM=0.000246 tol=14.9
2023-02-21 02:43:17,805 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=44.6 pTM=0.000909 tol=26.2
2023-02-21 02:43:17,805 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 02:43:18,542 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74.9 pTM=0.0933
2023-02-21 02:43:19,278 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=50.5 pTM=0.0845 tol=1.75
2023-02-21 02:43:20,013 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=35.9 pTM=0.0305 tol=17
2023-02-21 02:43:20,748 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=50.7 pTM=0.000174 tol=32.6
2023-02-21 02:43:20,748 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 02:43:20,749 reranking models by 'plddt' metric
2023-02-21 02:43:20,750 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=73.8 pTM=0.0871
2023-02-21 02:43:20,750 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=50.7 pTM=0.000174
2023-02-21 02:43:20,750 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=44.6 pTM=0.000909
2023-02-21 02:43:20,750 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=33.5 pTM=0.000252
2023-02-21 02:43:20,750 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=25.1 pTM=0.000332
2023-02-21 02:43:21,477 Query 2/80: 1qvk (length 6)
2023-02-21 02:43:23,298 Padding length to 14
2023-02-21 02:43:24,057 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.2 pTM=0.0609
2023-02-21 02:43:24,793 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=71.3 pTM=0.0611 tol=0.183
2023-02-21 02:43:25,528 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=69.7 pTM=0.0602 tol=0.69
2023-02-21 02:43:26,264 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=61.9 pTM=0.0602 tol=2.3
2023-02-21 02:43:26,264 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:27,002 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.0612
2023-02-21 02:43:27,738 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.0615 tol=0.173
2023-02-21 02:43:28,473 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=72.5 pTM=0.0617 tol=0.337
2023-02-21 02:43:29,210 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.3 pTM=0.0613 tol=0.246
2023-02-21 02:43:29,210 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 02:43:29,952 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.6 pTM=0.0632
2023-02-21 02:43:30,692 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.063 tol=0.913
2023-02-21 02:43:31,431 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=71.5 pTM=0.0629 tol=0.135
2023-02-21 02:43:32,171 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.9 pTM=0.0625 tol=0.934
2023-02-21 02:43:32,171 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:32,912 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0611
2023-02-21 02:43:33,652 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.6 pTM=0.0616 tol=0.241
2023-02-21 02:43:34,391 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.9 pTM=0.061 tol=0.172
2023-02-21 02:43:35,131 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.6 pTM=0.0614 tol=0.171
2023-02-21 02:43:35,131 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:35,872 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.061
2023-02-21 02:43:36,612 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.2 pTM=0.0616 tol=0.335
2023-02-21 02:43:37,351 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.2 pTM=0.061 tol=0.172
2023-02-21 02:43:38,091 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.6 pTM=0.0619 tol=0.292
2023-02-21 02:43:38,091 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:38,092 reranking models by 'plddt' metric
2023-02-21 02:43:38,092 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=74.9 pTM=0.0625
2023-02-21 02:43:38,092 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=74.6 pTM=0.0614
2023-02-21 02:43:38,092 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=72.6 pTM=0.0619
2023-02-21 02:43:38,092 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=67.3 pTM=0.0613
2023-02-21 02:43:38,092 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=61.9 pTM=0.0602
2023-02-21 02:43:38,757 Query 3/80: 1qvl (length 6)
2023-02-21 02:43:40,790 Padding length to 14
2023-02-21 02:43:41,545 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.2 pTM=0.0609
2023-02-21 02:43:42,285 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=71.3 pTM=0.0611 tol=0.183
2023-02-21 02:43:43,024 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=69.7 pTM=0.0602 tol=0.69
2023-02-21 02:43:43,768 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=61.9 pTM=0.0602 tol=2.3
2023-02-21 02:43:43,768 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:44,509 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.0612
2023-02-21 02:43:45,249 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.0615 tol=0.173
2023-02-21 02:43:45,989 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=72.5 pTM=0.0617 tol=0.337
2023-02-21 02:43:46,729 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.3 pTM=0.0613 tol=0.246
2023-02-21 02:43:46,729 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:47,474 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.6 pTM=0.0632
2023-02-21 02:43:48,214 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.063 tol=0.913
2023-02-21 02:43:48,953 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=71.5 pTM=0.0629 tol=0.135
2023-02-21 02:43:49,693 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.9 pTM=0.0625 tol=0.934
2023-02-21 02:43:49,693 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:50,434 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0611
2023-02-21 02:43:51,174 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.6 pTM=0.0616 tol=0.241
2023-02-21 02:43:51,913 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.9 pTM=0.061 tol=0.172
2023-02-21 02:43:52,652 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.6 pTM=0.0614 tol=0.171
2023-02-21 02:43:52,652 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:53,394 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.061
2023-02-21 02:43:54,133 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.2 pTM=0.0616 tol=0.335
2023-02-21 02:43:54,873 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.2 pTM=0.061 tol=0.172
2023-02-21 02:43:55,612 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.6 pTM=0.0619 tol=0.292
2023-02-21 02:43:55,612 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:43:55,614 reranking models by 'plddt' metric
2023-02-21 02:43:55,614 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=74.9 pTM=0.0625
2023-02-21 02:43:55,614 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=74.6 pTM=0.0614
2023-02-21 02:43:55,614 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=72.6 pTM=0.0619
2023-02-21 02:43:55,614 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=67.3 pTM=0.0613
2023-02-21 02:43:55,614 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=61.9 pTM=0.0602
2023-02-21 02:43:56,281 Query 4/80: 1ski (length 6)
2023-02-21 02:43:59,018 Padding length to 14
2023-02-21 02:43:59,770 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.1 pTM=0.0607
2023-02-21 02:44:00,509 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.9 pTM=0.0596 tol=0.502
2023-02-21 02:44:01,249 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=75.2 pTM=0.0591 tol=0.154
2023-02-21 02:44:01,988 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.0586 tol=0.115
2023-02-21 02:44:01,988 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:02,730 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.0625
2023-02-21 02:44:03,470 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=73 pTM=0.0617 tol=0.171
2023-02-21 02:44:04,209 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=73.5 pTM=0.0612 tol=0.0421
2023-02-21 02:44:04,949 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=75.4 pTM=0.0612 tol=0.0997
2023-02-21 02:44:04,949 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:05,691 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=70.9 pTM=0.0614
2023-02-21 02:44:06,430 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.9 pTM=0.0626 tol=0.369
2023-02-21 02:44:07,170 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.4 pTM=0.0619 tol=0.168
2023-02-21 02:44:07,910 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=76.8 pTM=0.0625 tol=0.087
2023-02-21 02:44:07,910 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:08,651 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74.5 pTM=0.0591
2023-02-21 02:44:09,391 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76 pTM=0.0607 tol=0.264
2023-02-21 02:44:10,131 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.4 pTM=0.0615 tol=0.263
2023-02-21 02:44:10,871 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.9 pTM=0.0615 tol=0.336
2023-02-21 02:44:10,871 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:11,612 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=61.3 pTM=0.0628
2023-02-21 02:44:12,352 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.9 pTM=0.0642 tol=1.68
2023-02-21 02:44:13,091 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=77.2 pTM=0.064 tol=0.101
2023-02-21 02:44:13,831 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74.4 pTM=0.0641 tol=0.0539
2023-02-21 02:44:13,831 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:13,832 reranking models by 'plddt' metric
2023-02-21 02:44:13,833 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=76.8 pTM=0.0625
2023-02-21 02:44:13,833 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=75.4 pTM=0.0612
2023-02-21 02:44:13,833 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.9 pTM=0.0615
2023-02-21 02:44:13,833 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=74.4 pTM=0.0641
2023-02-21 02:44:13,833 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=72.6 pTM=0.0586
2023-02-21 02:44:14,634 Query 5/80: 1skk (length 6)
2023-02-21 02:44:16,477 Padding length to 14
2023-02-21 02:44:17,240 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.9 pTM=0.0635
2023-02-21 02:44:17,981 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=70.2 pTM=0.0628 tol=0.159
2023-02-21 02:44:18,720 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=63.7 pTM=0.0607 tol=0.404
2023-02-21 02:44:19,459 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=61 pTM=0.0616 tol=1.8
2023-02-21 02:44:19,459 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:20,205 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=64.6 pTM=0.0622
2023-02-21 02:44:20,945 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.0632 tol=0.768
2023-02-21 02:44:21,684 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=59.2 pTM=0.0635 tol=0.739
2023-02-21 02:44:22,425 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=59.4 pTM=0.0637 tol=0.26
2023-02-21 02:44:22,425 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:23,166 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=79.1 pTM=0.0643
2023-02-21 02:44:23,906 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.7 pTM=0.0639 tol=0.0945
2023-02-21 02:44:24,646 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.6 pTM=0.0638 tol=0.0736
2023-02-21 02:44:25,386 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74 pTM=0.0639 tol=0.053
2023-02-21 02:44:25,386 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:26,127 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.9 pTM=0.0623
2023-02-21 02:44:26,868 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=68.1 pTM=0.063 tol=0.0939
2023-02-21 02:44:27,607 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=72.6 pTM=0.063 tol=0.137
2023-02-21 02:44:28,347 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=70.4 pTM=0.0634 tol=0.0791
2023-02-21 02:44:28,347 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:29,088 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=62.1 pTM=0.0626
2023-02-21 02:44:29,827 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.0632 tol=0.687
2023-02-21 02:44:30,567 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=71.6 pTM=0.0643 tol=0.23
2023-02-21 02:44:31,307 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.1 pTM=0.0643 tol=0.0425
2023-02-21 02:44:31,307 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:31,308 reranking models by 'plddt' metric
2023-02-21 02:44:31,308 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=74 pTM=0.0639
2023-02-21 02:44:31,308 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=72.1 pTM=0.0643
2023-02-21 02:44:31,308 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=70.4 pTM=0.0634
2023-02-21 02:44:31,308 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=61 pTM=0.0616
2023-02-21 02:44:31,308 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=59.4 pTM=0.0637
2023-02-21 02:44:31,972 Query 6/80: 2otq (length 6)
2023-02-21 02:44:33,831 Padding length to 14
2023-02-21 02:44:34,581 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.6 pTM=0.0606
2023-02-21 02:44:35,321 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.0603 tol=0.818
2023-02-21 02:44:36,060 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=76.2 pTM=0.0595 tol=0.853
2023-02-21 02:44:36,800 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.4 pTM=0.0595 tol=0.162
2023-02-21 02:44:36,800 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:37,542 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.0611
2023-02-21 02:44:38,282 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=75.1 pTM=0.0604 tol=0.173
2023-02-21 02:44:39,022 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.1 pTM=0.061 tol=0.11
2023-02-21 02:44:39,762 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=77.2 pTM=0.0616 tol=0.113
2023-02-21 02:44:39,762 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:40,504 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.2 pTM=0.0631
2023-02-21 02:44:41,244 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.0625 tol=0.472
2023-02-21 02:44:41,983 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=75.4 pTM=0.0623 tol=0.259
2023-02-21 02:44:42,723 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=76.6 pTM=0.0625 tol=0.35
2023-02-21 02:44:42,723 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:43,464 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74 pTM=0.0607
2023-02-21 02:44:44,204 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76.1 pTM=0.0612 tol=0.211
2023-02-21 02:44:44,944 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.6 pTM=0.061 tol=0.237
2023-02-21 02:44:45,684 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.4 pTM=0.0615 tol=0.0773
2023-02-21 02:44:45,684 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:46,425 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.1 pTM=0.0627
2023-02-21 02:44:47,165 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=74.7 pTM=0.0618 tol=0.34
2023-02-21 02:44:47,904 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.4 pTM=0.0619 tol=0.202
2023-02-21 02:44:48,643 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=73.7 pTM=0.0624 tol=0.198
2023-02-21 02:44:48,643 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:48,645 reranking models by 'plddt' metric
2023-02-21 02:44:48,645 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=77.2 pTM=0.0616
2023-02-21 02:44:48,645 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=76.6 pTM=0.0625
2023-02-21 02:44:48,645 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.4 pTM=0.0615
2023-02-21 02:44:48,645 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=73.7 pTM=0.0624
2023-02-21 02:44:48,645 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=73.4 pTM=0.0595
2023-02-21 02:44:49,463 Query 7/80: 2ox2 (length 6)
2023-02-21 02:44:51,319 Padding length to 14
2023-02-21 02:44:52,078 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.5 pTM=0.061
2023-02-21 02:44:52,818 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=74.4 pTM=0.0601 tol=0.137
2023-02-21 02:44:53,558 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.059 tol=1.13
2023-02-21 02:44:54,298 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=60.2 pTM=0.0608 tol=1.16
2023-02-21 02:44:54,298 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:55,039 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.2 pTM=0.0613
2023-02-21 02:44:55,780 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=76.3 pTM=0.0606 tol=0.237
2023-02-21 02:44:56,520 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.9 pTM=0.0603 tol=0.107
2023-02-21 02:44:57,260 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.6 pTM=0.0614 tol=0.135
2023-02-21 02:44:57,260 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:44:58,001 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=82.2 pTM=0.0633
2023-02-21 02:44:58,742 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=70.9 pTM=0.0624 tol=1.63
2023-02-21 02:44:59,481 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=76.9 pTM=0.062 tol=1.7
2023-02-21 02:45:00,221 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.3 pTM=0.0625 tol=0.257
2023-02-21 02:45:00,221 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:00,962 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.0611
2023-02-21 02:45:01,702 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76.4 pTM=0.0614 tol=0.117
2023-02-21 02:45:02,442 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.9 pTM=0.0608 tol=0.0745
2023-02-21 02:45:03,181 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=76.2 pTM=0.0611 tol=0.122
2023-02-21 02:45:03,182 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:03,923 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=71.4 pTM=0.0625
2023-02-21 02:45:04,663 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.0621 tol=0.125
2023-02-21 02:45:05,402 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=72.6 pTM=0.0617 tol=0.16
2023-02-21 02:45:06,142 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=71.4 pTM=0.0618 tol=0.0838
2023-02-21 02:45:06,142 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:06,143 reranking models by 'plddt' metric
2023-02-21 02:45:06,143 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=76.2 pTM=0.0611
2023-02-21 02:45:06,144 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=74.6 pTM=0.0614
2023-02-21 02:45:06,144 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=74.3 pTM=0.0625
2023-02-21 02:45:06,144 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=71.4 pTM=0.0618
2023-02-21 02:45:06,144 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=60.2 pTM=0.0608
2023-02-21 02:45:06,934 Query 8/80: 7m2a (length 7)
2023-02-21 02:45:07,544 Sleeping for 8s. Reason: PENDING
2023-02-21 02:45:17,402 Padding length to 14
2023-02-21 02:45:18,153 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.6 pTM=0.0601
2023-02-21 02:45:18,897 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.8 pTM=0.0649 tol=0.537
2023-02-21 02:45:19,636 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.2 pTM=0.0618 tol=0.0817
2023-02-21 02:45:20,376 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=67.6 pTM=0.058 tol=1.96
2023-02-21 02:45:20,376 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:21,117 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0586
2023-02-21 02:45:21,858 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86 pTM=0.0602 tol=0.202
2023-02-21 02:45:22,597 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.2 pTM=0.0596 tol=0.055
2023-02-21 02:45:23,338 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.5 pTM=0.0586 tol=0.0574
2023-02-21 02:45:23,338 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:24,079 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=78.6 pTM=0.0565
2023-02-21 02:45:24,819 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=79 pTM=0.059 tol=0.502
2023-02-21 02:45:25,558 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.1 pTM=0.0602 tol=0.152
2023-02-21 02:45:26,298 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.5 pTM=0.0612 tol=0.236
2023-02-21 02:45:26,298 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:27,039 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=79.2 pTM=0.0564
2023-02-21 02:45:27,779 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.9 pTM=0.0598 tol=0.182
2023-02-21 02:45:28,519 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.2 pTM=0.0603 tol=0.036
2023-02-21 02:45:29,259 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=80.6 pTM=0.0603 tol=0.097
2023-02-21 02:45:29,259 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:30,001 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=79.2 pTM=0.0583
2023-02-21 02:45:30,741 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.8 pTM=0.0596 tol=0.115
2023-02-21 02:45:31,480 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.3 pTM=0.0603 tol=0.0622
2023-02-21 02:45:32,220 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.8 pTM=0.0601 tol=0.106
2023-02-21 02:45:32,220 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:32,221 reranking models by 'plddt' metric
2023-02-21 02:45:32,221 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=83.5 pTM=0.0612
2023-02-21 02:45:32,221 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=82.5 pTM=0.0586
2023-02-21 02:45:32,221 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=80.8 pTM=0.0601
2023-02-21 02:45:32,221 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=80.6 pTM=0.0603
2023-02-21 02:45:32,221 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=67.6 pTM=0.058
2023-02-21 02:45:32,905 Query 9/80: 7m2c (length 7)
2023-02-21 02:45:33,501 Sleeping for 5s. Reason: PENDING
2023-02-21 02:45:40,332 Padding length to 14
2023-02-21 02:45:41,089 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.0602
2023-02-21 02:45:41,829 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.4 pTM=0.0616 tol=0.294
2023-02-21 02:45:42,568 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.6 pTM=0.0574 tol=0.998
2023-02-21 02:45:43,308 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=60.1 pTM=0.0578 tol=2.84
2023-02-21 02:45:43,308 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:44,050 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.0577
2023-02-21 02:45:44,790 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.3 pTM=0.0587 tol=0.184
2023-02-21 02:45:45,530 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.9 pTM=0.0584 tol=0.0858
2023-02-21 02:45:46,270 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.2 pTM=0.0585 tol=0.107
2023-02-21 02:45:46,270 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:47,012 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.7 pTM=0.0572
2023-02-21 02:45:47,752 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=79.6 pTM=0.0575 tol=0.09
2023-02-21 02:45:48,491 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.3 pTM=0.0581 tol=0.117
2023-02-21 02:45:49,231 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.9 pTM=0.0587 tol=0.105
2023-02-21 02:45:49,231 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:49,973 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=80.1 pTM=0.0578
2023-02-21 02:45:50,713 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=82 pTM=0.0593 tol=0.157
2023-02-21 02:45:51,452 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.2 pTM=0.0587 tol=0.0403
2023-02-21 02:45:52,192 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=78.8 pTM=0.0587 tol=0.0414
2023-02-21 02:45:52,192 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:52,933 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.7 pTM=0.0583
2023-02-21 02:45:53,673 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=80.9 pTM=0.0591 tol=0.139
2023-02-21 02:45:54,412 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=80.5 pTM=0.0599 tol=0.0376
2023-02-21 02:45:55,151 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.9 pTM=0.0594 tol=0.0275
2023-02-21 02:45:55,152 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:45:55,153 reranking models by 'plddt' metric
2023-02-21 02:45:55,153 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=80.9 pTM=0.0594
2023-02-21 02:45:55,153 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=80.9 pTM=0.0587
2023-02-21 02:45:55,153 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=78.8 pTM=0.0587
2023-02-21 02:45:55,153 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=76.2 pTM=0.0585
2023-02-21 02:45:55,153 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=60.1 pTM=0.0578
2023-02-21 02:45:55,982 Query 10/80: 7m28 (length 7)
2023-02-21 02:45:56,594 Sleeping for 8s. Reason: PENDING
2023-02-21 02:46:06,442 Padding length to 14
2023-02-21 02:46:07,206 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.0593
2023-02-21 02:46:07,945 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=79.1 pTM=0.0594 tol=0.538
2023-02-21 02:46:08,684 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.0585 tol=0.578
2023-02-21 02:46:09,424 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=65.6 pTM=0.0584 tol=2.56
2023-02-21 02:46:09,424 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:10,166 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=77.5 pTM=0.0576
2023-02-21 02:46:10,906 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.4 pTM=0.059 tol=0.28
2023-02-21 02:46:11,646 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=77.8 pTM=0.0596 tol=0.0696
2023-02-21 02:46:12,386 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76 pTM=0.059 tol=0.119
2023-02-21 02:46:12,387 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:13,128 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.9 pTM=0.0576
2023-02-21 02:46:13,868 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=80.7 pTM=0.0586 tol=0.195
2023-02-21 02:46:14,608 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=81.9 pTM=0.0589 tol=0.138
2023-02-21 02:46:15,348 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81.6 pTM=0.0595 tol=0.136
2023-02-21 02:46:15,348 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:16,089 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=70.3 pTM=0.0551
2023-02-21 02:46:16,829 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=74.6 pTM=0.0573 tol=0.116
2023-02-21 02:46:17,569 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.1 pTM=0.0574 tol=0.0162
2023-02-21 02:46:18,309 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.2 pTM=0.0576 tol=0.0351
2023-02-21 02:46:18,309 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:19,050 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.2 pTM=0.0569
2023-02-21 02:46:19,791 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=70.2 pTM=0.0586 tol=0.843
2023-02-21 02:46:20,530 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.2 pTM=0.0591 tol=0.725
2023-02-21 02:46:21,269 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.3 pTM=0.0594 tol=0.135
2023-02-21 02:46:21,270 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:21,271 reranking models by 'plddt' metric
2023-02-21 02:46:21,271 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=82.3 pTM=0.0594
2023-02-21 02:46:21,271 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=81.6 pTM=0.0595
2023-02-21 02:46:21,271 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=76 pTM=0.059
2023-02-21 02:46:21,271 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=75.2 pTM=0.0576
2023-02-21 02:46:21,271 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=65.6 pTM=0.0584
2023-02-21 02:46:21,941 Query 11/80: 6wpv (length 8)
2023-02-21 02:46:22,530 Sleeping for 7s. Reason: PENDING
2023-02-21 02:46:31,521 Padding length to 14
2023-02-21 02:46:32,277 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=74.8 pTM=0.0539
2023-02-21 02:46:33,017 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.6 pTM=0.0558 tol=0.719
2023-02-21 02:46:33,756 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=79.8 pTM=0.0565 tol=0.629
2023-02-21 02:46:34,501 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.6 pTM=0.0562 tol=0.168
2023-02-21 02:46:34,501 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:35,243 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=75.9 pTM=0.0501
2023-02-21 02:46:35,984 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=78.9 pTM=0.0518 tol=0.756
2023-02-21 02:46:36,723 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.0527 tol=0.768
2023-02-21 02:46:37,463 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=79 pTM=0.0517 tol=1.02
2023-02-21 02:46:37,464 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:38,205 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.0503
2023-02-21 02:46:38,945 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=67.8 pTM=0.0513 tol=1.67
2023-02-21 02:46:39,684 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=72.6 pTM=0.0518 tol=1.5
2023-02-21 02:46:40,424 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.6 pTM=0.0514 tol=0.315
2023-02-21 02:46:40,424 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:41,165 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.5 pTM=0.0506
2023-02-21 02:46:41,905 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.8 pTM=0.052 tol=0.426
2023-02-21 02:46:42,645 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.1 pTM=0.0525 tol=0.159
2023-02-21 02:46:43,388 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.1 pTM=0.0524 tol=0.0786
2023-02-21 02:46:43,389 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:44,130 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=67.6 pTM=0.0528
2023-02-21 02:46:44,870 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.2 pTM=0.0557 tol=0.222
2023-02-21 02:46:45,609 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67 pTM=0.0557 tol=0.133
2023-02-21 02:46:46,349 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.2 pTM=0.0561 tol=0.248
2023-02-21 02:46:46,349 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:46:46,351 reranking models by 'plddt' metric
2023-02-21 02:46:46,351 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=79 pTM=0.0517
2023-02-21 02:46:46,351 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=78.6 pTM=0.0562
2023-02-21 02:46:46,351 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.1 pTM=0.0524
2023-02-21 02:46:46,351 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=73.6 pTM=0.0514
2023-02-21 02:46:46,351 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=68.2 pTM=0.0561
2023-02-21 02:46:47,041 Query 12/80: 7m2b (length 8)
2023-02-21 02:46:47,642 Sleeping for 9s. Reason: PENDING
2023-02-21 02:46:58,470 Padding length to 14
2023-02-21 02:46:59,230 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.9 pTM=0.0517
2023-02-21 02:46:59,970 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.9 pTM=0.0532 tol=0.504
2023-02-21 02:47:00,709 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=76.4 pTM=0.0534 tol=0.304
2023-02-21 02:47:01,449 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.5 pTM=0.0538 tol=0.134
2023-02-21 02:47:01,449 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:02,191 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.5 pTM=0.0497
2023-02-21 02:47:02,931 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=71.8 pTM=0.0518 tol=0.371
2023-02-21 02:47:03,833 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.4 pTM=0.0527 tol=0.453
2023-02-21 02:47:04,574 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.2 pTM=0.0537 tol=0.407
2023-02-21 02:47:04,574 alphafold2_ptm_model_2_seed_000 took 3.1s (3 recycles)
2023-02-21 02:47:05,316 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=78.1 pTM=0.0514
2023-02-21 02:47:06,056 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=80.8 pTM=0.0526 tol=0.333
2023-02-21 02:47:06,795 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.3 pTM=0.0519 tol=0.123
2023-02-21 02:47:07,535 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.9 pTM=0.0524 tol=0.21
2023-02-21 02:47:07,535 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:08,281 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=73.1 pTM=0.0511
2023-02-21 02:47:09,021 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=78.1 pTM=0.0532 tol=0.439
2023-02-21 02:47:09,760 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=80.4 pTM=0.0547 tol=0.223
2023-02-21 02:47:10,504 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=83.7 pTM=0.056 tol=0.156
2023-02-21 02:47:10,505 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:11,252 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74.1 pTM=0.0518
2023-02-21 02:47:11,992 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.3 pTM=0.0536 tol=0.119
2023-02-21 02:47:12,731 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.4 pTM=0.053 tol=0.102
2023-02-21 02:47:13,472 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.8 pTM=0.0535 tol=1.06
2023-02-21 02:47:13,472 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:13,473 reranking models by 'plddt' metric
2023-02-21 02:47:13,473 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=83.7 pTM=0.056
2023-02-21 02:47:13,473 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=80.9 pTM=0.0524
2023-02-21 02:47:13,473 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=78.5 pTM=0.0538
2023-02-21 02:47:13,473 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=76.2 pTM=0.0537
2023-02-21 02:47:13,473 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=68.8 pTM=0.0535
2023-02-21 02:47:14,285 Query 13/80: 7m25 (length 8)
2023-02-21 02:47:14,895 Sleeping for 6s. Reason: PENDING
2023-02-21 02:47:22,736 Padding length to 14
2023-02-21 02:47:23,486 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.0532
2023-02-21 02:47:24,221 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.0541 tol=0.433
2023-02-21 02:47:24,962 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=69.6 pTM=0.0533 tol=0.221
2023-02-21 02:47:25,697 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.8 pTM=0.0537 tol=0.295
2023-02-21 02:47:25,697 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:26,435 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.9 pTM=0.0497
2023-02-21 02:47:27,172 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=71.8 pTM=0.05 tol=0.364
2023-02-21 02:47:27,908 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=72.8 pTM=0.0498 tol=0.196
2023-02-21 02:47:28,644 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=72.7 pTM=0.0499 tol=0.298
2023-02-21 02:47:28,644 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 02:47:29,382 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.7 pTM=0.0501
2023-02-21 02:47:30,118 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.5 pTM=0.0509 tol=0.77
2023-02-21 02:47:30,854 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.7 pTM=0.0508 tol=0.0748
2023-02-21 02:47:31,590 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.1 pTM=0.0504 tol=0.19
2023-02-21 02:47:31,590 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 02:47:32,328 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.2 pTM=0.0504
2023-02-21 02:47:33,064 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.9 pTM=0.0513 tol=0.263
2023-02-21 02:47:33,799 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.2 pTM=0.052 tol=0.157
2023-02-21 02:47:34,535 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.9 pTM=0.052 tol=0.0597
2023-02-21 02:47:34,535 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 02:47:35,272 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74 pTM=0.0501
2023-02-21 02:47:36,008 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.2 pTM=0.0516 tol=0.611
2023-02-21 02:47:36,743 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.4 pTM=0.0514 tol=0.332
2023-02-21 02:47:37,479 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.6 pTM=0.0513 tol=0.317
2023-02-21 02:47:37,479 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 02:47:37,480 reranking models by 'plddt' metric
2023-02-21 02:47:37,480 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=74.9 pTM=0.052
2023-02-21 02:47:37,480 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=74.1 pTM=0.0504
2023-02-21 02:47:37,480 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=72.7 pTM=0.0499
2023-02-21 02:47:37,481 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=70.6 pTM=0.0513
2023-02-21 02:47:37,481 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=68.8 pTM=0.0537
2023-02-21 02:47:38,161 Query 14/80: 7m27 (length 8)
2023-02-21 02:47:38,772 Sleeping for 7s. Reason: PENDING
2023-02-21 02:47:47,600 Padding length to 14
2023-02-21 02:47:48,356 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.2 pTM=0.0538
2023-02-21 02:47:49,091 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.2 pTM=0.0539 tol=0.206
2023-02-21 02:47:49,827 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=78.6 pTM=0.0544 tol=0.418
2023-02-21 02:47:50,563 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.8 pTM=0.0544 tol=0.232
2023-02-21 02:47:50,563 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:51,301 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81 pTM=0.0525
2023-02-21 02:47:52,037 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=80.1 pTM=0.0529 tol=0.316
2023-02-21 02:47:52,773 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=77.4 pTM=0.054 tol=0.458
2023-02-21 02:47:53,509 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=79.9 pTM=0.0542 tol=0.526
2023-02-21 02:47:53,510 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 02:47:54,247 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.6 pTM=0.0504
2023-02-21 02:47:54,989 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81.7 pTM=0.0512 tol=0.0945
2023-02-21 02:47:55,725 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.3 pTM=0.0524 tol=0.153
2023-02-21 02:47:56,461 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=82.7 pTM=0.0515 tol=0.0385
2023-02-21 02:47:56,461 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:47:57,198 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=78.4 pTM=0.0509
2023-02-21 02:47:57,934 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.4 pTM=0.0516 tol=0.155
2023-02-21 02:47:58,670 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=80.3 pTM=0.0523 tol=0.0603
2023-02-21 02:47:59,406 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=82.1 pTM=0.0523 tol=0.0488
2023-02-21 02:47:59,406 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 02:48:00,143 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=81.4 pTM=0.053
2023-02-21 02:48:00,879 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84.7 pTM=0.0547 tol=0.123
2023-02-21 02:48:01,614 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=84.7 pTM=0.0548 tol=0.0547
2023-02-21 02:48:02,353 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.1 pTM=0.0553 tol=0.0994
2023-02-21 02:48:02,353 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 02:48:02,354 reranking models by 'plddt' metric
2023-02-21 02:48:02,354 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=86.1 pTM=0.0553
2023-02-21 02:48:02,354 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=82.7 pTM=0.0515
2023-02-21 02:48:02,354 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=82.1 pTM=0.0523
2023-02-21 02:48:02,354 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=79.9 pTM=0.0542
2023-02-21 02:48:02,354 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=78.8 pTM=0.0544
2023-02-21 02:48:03,179 Query 15/80: 7m29 (length 8)
2023-02-21 02:48:03,779 Sleeping for 9s. Reason: PENDING
2023-02-21 02:48:14,635 Padding length to 14
2023-02-21 02:48:15,392 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.2 pTM=0.0515
2023-02-21 02:48:16,128 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.0524 tol=0.48
2023-02-21 02:48:16,863 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=72.4 pTM=0.0523 tol=0.417
2023-02-21 02:48:17,599 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.3 pTM=0.0523 tol=0.229
2023-02-21 02:48:17,599 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:18,337 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.6 pTM=0.0499
2023-02-21 02:48:19,074 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=68.8 pTM=0.0497 tol=0.649
2023-02-21 02:48:19,809 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=70.2 pTM=0.0506 tol=0.44
2023-02-21 02:48:20,545 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=71.5 pTM=0.0501 tol=0.479
2023-02-21 02:48:20,546 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 02:48:21,283 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.3 pTM=0.0478
2023-02-21 02:48:22,019 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=74.4 pTM=0.0484 tol=0.259
2023-02-21 02:48:22,755 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.1 pTM=0.0484 tol=0.0676
2023-02-21 02:48:23,490 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.3 pTM=0.0482 tol=0.295
2023-02-21 02:48:23,491 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 02:48:24,228 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.5 pTM=0.0488
2023-02-21 02:48:24,968 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=69.3 pTM=0.0495 tol=0.197
2023-02-21 02:48:25,707 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=67.8 pTM=0.0493 tol=0.126
2023-02-21 02:48:26,447 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=68.4 pTM=0.0493 tol=0.111
2023-02-21 02:48:26,447 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:27,191 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=77.6 pTM=0.0514
2023-02-21 02:48:27,932 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.6 pTM=0.0504 tol=0.376
2023-02-21 02:48:28,672 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.8 pTM=0.0498 tol=0.779
2023-02-21 02:48:29,412 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74.8 pTM=0.0497 tol=0.2
2023-02-21 02:48:29,412 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:29,414 reranking models by 'plddt' metric
2023-02-21 02:48:29,414 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=74.8 pTM=0.0497
2023-02-21 02:48:29,414 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=73.3 pTM=0.0482
2023-02-21 02:48:29,414 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=73.3 pTM=0.0523
2023-02-21 02:48:29,414 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=71.5 pTM=0.0501
2023-02-21 02:48:29,414 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=68.4 pTM=0.0493
2023-02-21 02:48:30,083 Query 16/80: 2lws (length 12)
2023-02-21 02:48:30,696 Sleeping for 10s. Reason: PENDING
2023-02-21 02:48:42,725 Padding length to 14
2023-02-21 02:48:43,477 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87.1 pTM=0.0429
2023-02-21 02:48:44,217 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.1 pTM=0.0425 tol=0.134
2023-02-21 02:48:44,956 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.4 pTM=0.0423 tol=0.0656
2023-02-21 02:48:45,696 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.4 pTM=0.0412 tol=0.0789
2023-02-21 02:48:45,696 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:46,442 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0415
2023-02-21 02:48:47,182 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=81.8 pTM=0.0411 tol=0.19
2023-02-21 02:48:47,922 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=82.5 pTM=0.0413 tol=0.0473
2023-02-21 02:48:48,662 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.8 pTM=0.0386 tol=0.164
2023-02-21 02:48:48,662 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:49,404 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.4 pTM=0.0436
2023-02-21 02:48:50,144 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.8 pTM=0.0424 tol=0.169
2023-02-21 02:48:50,883 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=86.6 pTM=0.0426 tol=0.109
2023-02-21 02:48:51,623 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.9 pTM=0.0409 tol=0.156
2023-02-21 02:48:51,623 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:52,365 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.1 pTM=0.0427
2023-02-21 02:48:53,105 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88.8 pTM=0.0431 tol=0.0813
2023-02-21 02:48:53,845 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91 pTM=0.0446 tol=0.079
2023-02-21 02:48:54,585 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=88.8 pTM=0.0437 tol=0.0551
2023-02-21 02:48:54,585 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:55,331 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.4 pTM=0.0436
2023-02-21 02:48:56,071 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.8 pTM=0.0422 tol=0.107
2023-02-21 02:48:56,814 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.9 pTM=0.043 tol=0.0685
2023-02-21 02:48:57,554 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=84.8 pTM=0.0416 tol=0.121
2023-02-21 02:48:57,554 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:48:57,556 reranking models by 'plddt' metric
2023-02-21 02:48:57,556 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=88.8 pTM=0.0437
2023-02-21 02:48:57,556 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=84.8 pTM=0.0416
2023-02-21 02:48:57,556 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=83.9 pTM=0.0409
2023-02-21 02:48:57,556 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=83.4 pTM=0.0412
2023-02-21 02:48:57,556 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=76.8 pTM=0.0386
2023-02-21 02:48:58,235 Query 17/80: 2ndm (length 13)
2023-02-21 02:48:58,838 Sleeping for 7s. Reason: PENDING
2023-02-21 02:49:06,444 Sleeping for 9s. Reason: RUNNING
2023-02-21 02:49:17,301 Padding length to 14
2023-02-21 02:49:18,065 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.5 pTM=0.0361
2023-02-21 02:49:18,803 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=79.8 pTM=0.0362 tol=0.0919
2023-02-21 02:49:19,542 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=79.4 pTM=0.0362 tol=0.0441
2023-02-21 02:49:20,282 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.8 pTM=0.0368 tol=0.0691
2023-02-21 02:49:20,282 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:21,024 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.7 pTM=0.0346
2023-02-21 02:49:21,764 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.2 pTM=0.0338 tol=0.355
2023-02-21 02:49:22,503 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=68.9 pTM=0.0336 tol=0.116
2023-02-21 02:49:23,243 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.0331 tol=0.131
2023-02-21 02:49:23,243 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:23,985 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=74.7 pTM=0.0336
2023-02-21 02:49:24,725 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=77.5 pTM=0.0344 tol=0.512
2023-02-21 02:49:25,468 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.2 pTM=0.0352 tol=0.128
2023-02-21 02:49:26,208 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.8 pTM=0.0366 tol=0.256
2023-02-21 02:49:26,208 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:26,950 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0328
2023-02-21 02:49:27,689 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80 pTM=0.0345 tol=0.536
2023-02-21 02:49:28,429 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=84.8 pTM=0.0375 tol=0.263
2023-02-21 02:49:29,168 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.9 pTM=0.0419 tol=0.16
2023-02-21 02:49:29,169 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:29,910 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.4 pTM=0.0336
2023-02-21 02:49:30,649 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.6 pTM=0.034 tol=0.38
2023-02-21 02:49:31,387 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.1 pTM=0.0344 tol=0.188
2023-02-21 02:49:32,126 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=75.1 pTM=0.0347 tol=0.0941
2023-02-21 02:49:32,126 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:32,128 reranking models by 'plddt' metric
2023-02-21 02:49:32,128 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=90.9 pTM=0.0419
2023-02-21 02:49:32,128 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=83.8 pTM=0.0366
2023-02-21 02:49:32,128 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=78.8 pTM=0.0368
2023-02-21 02:49:32,128 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=75.1 pTM=0.0347
2023-02-21 02:49:32,128 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=66.5 pTM=0.0331
2023-02-21 02:49:32,930 Query 18/80: 1jbl (length 14)
2023-02-21 02:49:33,528 Sleeping for 6s. Reason: PENDING
2023-02-21 02:49:42,114 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.9 pTM=0.042
2023-02-21 02:49:42,853 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.9 pTM=0.042 tol=0.106
2023-02-21 02:49:43,592 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.043 tol=0.0522
2023-02-21 02:49:44,332 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.8 pTM=0.0429 tol=0.0337
2023-02-21 02:49:44,332 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:45,074 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.7 pTM=0.0427
2023-02-21 02:49:45,814 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.1 pTM=0.0427 tol=0.119
2023-02-21 02:49:46,553 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.0434 tol=0.046
2023-02-21 02:49:47,294 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94 pTM=0.0436 tol=0.0262
2023-02-21 02:49:47,294 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:48,036 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.1 pTM=0.0434
2023-02-21 02:49:48,775 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.7 pTM=0.0446 tol=0.147
2023-02-21 02:49:49,515 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.2 pTM=0.0453 tol=0.0483
2023-02-21 02:49:50,254 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.3 pTM=0.0453 tol=0.0181
2023-02-21 02:49:50,254 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:50,996 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.9 pTM=0.0432
2023-02-21 02:49:51,735 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0441 tol=0.114
2023-02-21 02:49:52,474 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.9 pTM=0.0445 tol=0.047
2023-02-21 02:49:53,213 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.8 pTM=0.0446 tol=0.0199
2023-02-21 02:49:53,213 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:53,955 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.9 pTM=0.0442
2023-02-21 02:49:54,694 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.8 pTM=0.0452 tol=0.115
2023-02-21 02:49:55,433 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.2 pTM=0.0459 tol=0.0295
2023-02-21 02:49:56,173 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.9 pTM=0.0455 tol=0.036
2023-02-21 02:49:56,173 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:49:56,174 reranking models by 'plddt' metric
2023-02-21 02:49:56,175 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.9 pTM=0.0455
2023-02-21 02:49:56,175 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.8 pTM=0.0446
2023-02-21 02:49:56,175 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95.3 pTM=0.0453
2023-02-21 02:49:56,175 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94 pTM=0.0436
2023-02-21 02:49:56,175 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.8 pTM=0.0429
2023-02-21 02:49:56,836 Query 19/80: 2ns4 (length 14)
2023-02-21 02:49:57,435 Sleeping for 10s. Reason: PENDING
2023-02-21 02:50:10,016 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=59.6 pTM=0.0282
2023-02-21 02:50:10,756 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=57.3 pTM=0.0276 tol=0.816
2023-02-21 02:50:11,495 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=56.8 pTM=0.0284 tol=0.973
2023-02-21 02:50:12,234 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=58.2 pTM=0.028 tol=0.721
2023-02-21 02:50:12,234 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:12,980 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=61 pTM=0.0281
2023-02-21 02:50:13,720 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=63 pTM=0.0289 tol=0.941
2023-02-21 02:50:14,459 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=64.1 pTM=0.029 tol=0.123
2023-02-21 02:50:15,199 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=64.8 pTM=0.0292 tol=0.107
2023-02-21 02:50:15,199 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:15,940 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=64.2 pTM=0.0271
2023-02-21 02:50:16,679 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=64.5 pTM=0.0271 tol=0.371
2023-02-21 02:50:17,418 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=64.1 pTM=0.0275 tol=0.468
2023-02-21 02:50:18,157 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=64 pTM=0.0277 tol=0.214
2023-02-21 02:50:18,157 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:18,899 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=64.5 pTM=0.0276
2023-02-21 02:50:19,638 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.0281 tol=0.61
2023-02-21 02:50:20,377 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=62.7 pTM=0.0278 tol=0.752
2023-02-21 02:50:21,117 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=70.1 pTM=0.0298 tol=1.1
2023-02-21 02:50:21,117 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:21,859 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=63.4 pTM=0.0269
2023-02-21 02:50:22,599 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=78.1 pTM=0.0305 tol=1.28
2023-02-21 02:50:23,338 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=84.3 pTM=0.0332 tol=0.108
2023-02-21 02:50:24,077 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=84.3 pTM=0.0336 tol=0.0531
2023-02-21 02:50:24,077 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:24,079 reranking models by 'plddt' metric
2023-02-21 02:50:24,079 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=84.3 pTM=0.0336
2023-02-21 02:50:24,079 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=70.1 pTM=0.0298
2023-02-21 02:50:24,079 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=64.8 pTM=0.0292
2023-02-21 02:50:24,079 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=64 pTM=0.0277
2023-02-21 02:50:24,079 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=58.2 pTM=0.028
2023-02-21 02:50:24,901 Query 20/80: 6u7q (length 14)
2023-02-21 02:50:25,506 Sleeping for 7s. Reason: PENDING
2023-02-21 02:50:35,117 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.6 pTM=0.0416
2023-02-21 02:50:35,856 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.7 pTM=0.0414 tol=0.1
2023-02-21 02:50:36,595 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.9 pTM=0.0424 tol=0.0449
2023-02-21 02:50:37,335 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.5 pTM=0.0425 tol=0.0331
2023-02-21 02:50:37,335 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:38,077 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.4 pTM=0.0412
2023-02-21 02:50:38,816 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.6 pTM=0.0417 tol=0.132
2023-02-21 02:50:39,555 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.3 pTM=0.0426 tol=0.0572
2023-02-21 02:50:40,295 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.6 pTM=0.0427 tol=0.0462
2023-02-21 02:50:40,295 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:41,036 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.6 pTM=0.0402
2023-02-21 02:50:41,777 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.4 pTM=0.042 tol=0.138
2023-02-21 02:50:42,516 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.9 pTM=0.0429 tol=0.0333
2023-02-21 02:50:43,255 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95 pTM=0.0429 tol=0.0408
2023-02-21 02:50:43,256 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:44,001 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.6 pTM=0.0417
2023-02-21 02:50:44,741 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.5 pTM=0.0436 tol=0.138
2023-02-21 02:50:45,480 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.9 pTM=0.0442 tol=0.0806
2023-02-21 02:50:46,220 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.0441 tol=0.024
2023-02-21 02:50:46,220 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:46,967 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.8 pTM=0.0409
2023-02-21 02:50:47,711 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.8 pTM=0.0433 tol=0.202
2023-02-21 02:50:48,450 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.2 pTM=0.0443 tol=0.0529
2023-02-21 02:50:49,190 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.2 pTM=0.0443 tol=0.0319
2023-02-21 02:50:49,190 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:50:49,191 reranking models by 'plddt' metric
2023-02-21 02:50:49,192 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.2 pTM=0.0443
2023-02-21 02:50:49,192 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.0441
2023-02-21 02:50:49,192 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95 pTM=0.0429
2023-02-21 02:50:49,192 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=92.6 pTM=0.0427
2023-02-21 02:50:49,192 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.5 pTM=0.0425
2023-02-21 02:50:49,859 Query 21/80: 6u7r (length 14)
2023-02-21 02:50:50,459 Sleeping for 9s. Reason: PENDING
2023-02-21 02:51:02,219 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0439
2023-02-21 02:51:02,958 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.4 pTM=0.0442 tol=0.0668
2023-02-21 02:51:03,702 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.6 pTM=0.0442 tol=0.0429
2023-02-21 02:51:04,441 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.8 pTM=0.0447 tol=0.0436
2023-02-21 02:51:04,441 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:05,186 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93 pTM=0.0445
2023-02-21 02:51:05,926 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.9 pTM=0.0463 tol=0.0955
2023-02-21 02:51:06,668 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.9 pTM=0.0461 tol=0.0607
2023-02-21 02:51:07,408 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.4 pTM=0.0465 tol=0.038
2023-02-21 02:51:07,408 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:08,150 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.6 pTM=0.0453
2023-02-21 02:51:08,889 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.0464 tol=0.0473
2023-02-21 02:51:09,628 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.2 pTM=0.0463 tol=0.0324
2023-02-21 02:51:10,367 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.0464 tol=0.0242
2023-02-21 02:51:10,367 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:11,109 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.6 pTM=0.046
2023-02-21 02:51:11,849 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.2 pTM=0.0469 tol=0.058
2023-02-21 02:51:12,596 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.1 pTM=0.0469 tol=0.0315
2023-02-21 02:51:13,426 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0471 tol=0.0163
2023-02-21 02:51:13,426 alphafold2_ptm_model_4_seed_000 took 3.1s (3 recycles)
2023-02-21 02:51:14,169 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.7 pTM=0.0439
2023-02-21 02:51:14,908 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.4 pTM=0.0447 tol=0.047
2023-02-21 02:51:15,647 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.9 pTM=0.0445 tol=0.042
2023-02-21 02:51:16,386 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.0452 tol=0.045
2023-02-21 02:51:16,386 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:16,388 reranking models by 'plddt' metric
2023-02-21 02:51:16,388 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0471
2023-02-21 02:51:16,388 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.0452
2023-02-21 02:51:16,388 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.0464
2023-02-21 02:51:16,388 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.4 pTM=0.0465
2023-02-21 02:51:16,388 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=93.8 pTM=0.0447
2023-02-21 02:51:17,060 Query 22/80: 6u7s (length 14)
2023-02-21 02:51:17,656 Sleeping for 5s. Reason: PENDING
2023-02-21 02:51:25,228 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.9 pTM=0.0423
2023-02-21 02:51:25,967 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.4 pTM=0.0418 tol=0.0637
2023-02-21 02:51:26,706 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.1 pTM=0.042 tol=0.0531
2023-02-21 02:51:27,445 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.4 pTM=0.0424 tol=0.0446
2023-02-21 02:51:27,445 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:28,187 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0439
2023-02-21 02:51:28,927 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.9 pTM=0.0441 tol=0.0802
2023-02-21 02:51:29,667 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.6 pTM=0.0435 tol=0.0365
2023-02-21 02:51:30,406 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.1 pTM=0.0442 tol=0.0275
2023-02-21 02:51:30,407 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:31,150 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.2 pTM=0.0447
2023-02-21 02:51:31,890 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.3 pTM=0.0442 tol=0.117
2023-02-21 02:51:32,629 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.8 pTM=0.0437 tol=0.0449
2023-02-21 02:51:33,369 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.8 pTM=0.0435 tol=0.046
2023-02-21 02:51:33,369 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:34,111 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.4 pTM=0.0447
2023-02-21 02:51:34,850 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0451 tol=0.0636
2023-02-21 02:51:35,591 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.4 pTM=0.0453 tol=0.0186
2023-02-21 02:51:36,330 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.5 pTM=0.0455 tol=0.028
2023-02-21 02:51:36,331 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:37,072 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95.1 pTM=0.0447
2023-02-21 02:51:37,811 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.5 pTM=0.0447 tol=0.0707
2023-02-21 02:51:38,550 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.1 pTM=0.0439 tol=0.0334
2023-02-21 02:51:39,289 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.0445 tol=0.0284
2023-02-21 02:51:39,289 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 02:51:39,291 reranking models by 'plddt' metric
2023-02-21 02:51:39,291 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.5 pTM=0.0455
2023-02-21 02:51:39,291 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.0445
2023-02-21 02:51:39,291 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.8 pTM=0.0435
2023-02-21 02:51:39,291 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.1 pTM=0.0442
2023-02-21 02:51:39,291 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.4 pTM=0.0424
2023-02-21 02:51:40,095 Query 23/80: 2lwu (length 15)
2023-02-21 02:51:40,692 Sleeping for 5s. Reason: PENDING
2023-02-21 02:51:47,536 Padding length to 25
2023-02-21 02:51:55,856 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=95.1 pTM=0.0431
2023-02-21 02:51:56,792 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=95 pTM=0.0432 tol=0.0978
2023-02-21 02:51:57,727 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.9 pTM=0.043 tol=0.0489
2023-02-21 02:51:58,663 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.9 pTM=0.0432 tol=0.0282
2023-02-21 02:51:58,663 alphafold2_ptm_model_1_seed_000 took 11.1s (3 recycles)
2023-02-21 02:51:59,603 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=95.4 pTM=0.0436
2023-02-21 02:52:00,540 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=95.5 pTM=0.0446 tol=0.049
2023-02-21 02:52:01,478 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.4 pTM=0.0446 tol=0.0396
2023-02-21 02:52:02,415 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.4 pTM=0.0445 tol=0.0159
2023-02-21 02:52:02,415 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:52:03,355 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=96.1 pTM=0.0432
2023-02-21 02:52:04,291 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=96.2 pTM=0.0441 tol=0.0625
2023-02-21 02:52:05,228 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.4 pTM=0.0442 tol=0.0507
2023-02-21 02:52:06,165 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.2 pTM=0.044 tol=0.022
2023-02-21 02:52:06,165 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:07,105 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=97 pTM=0.0462
2023-02-21 02:52:08,040 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=97.1 pTM=0.0468 tol=0.0515
2023-02-21 02:52:08,976 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=97.1 pTM=0.0466 tol=0.0283
2023-02-21 02:52:09,912 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=97.1 pTM=0.0465 tol=0.0185
2023-02-21 02:52:09,912 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:10,851 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=97.1 pTM=0.0457
2023-02-21 02:52:11,789 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=97.1 pTM=0.0469 tol=0.0632
2023-02-21 02:52:12,725 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=97 pTM=0.0466 tol=0.0556
2023-02-21 02:52:13,667 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=97.1 pTM=0.0466 tol=0.018
2023-02-21 02:52:13,667 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 02:52:13,669 reranking models by 'plddt' metric
2023-02-21 02:52:13,669 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=97.1 pTM=0.0465
2023-02-21 02:52:13,669 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=97.1 pTM=0.0466
2023-02-21 02:52:13,669 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=96.2 pTM=0.044
2023-02-21 02:52:13,669 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.4 pTM=0.0445
2023-02-21 02:52:13,670 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.9 pTM=0.0432
2023-02-21 02:52:14,353 Query 24/80: 2ndl (length 16)
2023-02-21 02:52:14,939 Sleeping for 6s. Reason: PENDING
2023-02-21 02:52:22,789 Padding length to 25
2023-02-21 02:52:23,744 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.8 pTM=0.0357
2023-02-21 02:52:24,680 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.2 pTM=0.0344 tol=0.164
2023-02-21 02:52:25,615 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87.2 pTM=0.0333 tol=0.0891
2023-02-21 02:52:26,550 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87 pTM=0.0338 tol=0.0525
2023-02-21 02:52:26,550 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:52:27,490 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.5 pTM=0.0368
2023-02-21 02:52:28,427 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.2 pTM=0.036 tol=0.118
2023-02-21 02:52:29,364 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.8 pTM=0.0359 tol=0.0676
2023-02-21 02:52:30,302 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.3 pTM=0.0357 tol=0.0601
2023-02-21 02:52:30,302 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:31,241 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.0357
2023-02-21 02:52:32,179 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.8 pTM=0.0347 tol=0.154
2023-02-21 02:52:33,115 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=88.8 pTM=0.0347 tol=0.0561
2023-02-21 02:52:34,051 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.1 pTM=0.0347 tol=0.0487
2023-02-21 02:52:34,052 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:34,990 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.9 pTM=0.0357
2023-02-21 02:52:35,926 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.6 pTM=0.0362 tol=0.132
2023-02-21 02:52:36,862 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.9 pTM=0.0354 tol=0.0286
2023-02-21 02:52:37,798 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.7 pTM=0.0359 tol=0.0364
2023-02-21 02:52:37,799 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:38,738 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.5 pTM=0.0394
2023-02-21 02:52:39,675 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.1 pTM=0.0391 tol=0.11
2023-02-21 02:52:40,612 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0391 tol=0.0427
2023-02-21 02:52:41,549 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.2 pTM=0.0395 tol=0.0424
2023-02-21 02:52:41,549 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:52:41,551 reranking models by 'plddt' metric
2023-02-21 02:52:41,551 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.2 pTM=0.0395
2023-02-21 02:52:41,551 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.7 pTM=0.0359
2023-02-21 02:52:41,551 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=88.3 pTM=0.0357
2023-02-21 02:52:41,552 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=88.1 pTM=0.0347
2023-02-21 02:52:41,552 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=87 pTM=0.0338
2023-02-21 02:52:42,364 Query 25/80: 2ndn (length 16)
2023-02-21 02:52:42,962 Sleeping for 6s. Reason: PENDING
2023-02-21 02:52:50,824 Padding length to 25
2023-02-21 02:52:51,774 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0381
2023-02-21 02:52:52,710 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.6 pTM=0.0376 tol=0.0621
2023-02-21 02:52:53,683 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.1 pTM=0.0377 tol=0.033
2023-02-21 02:52:54,661 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.6 pTM=0.0383 tol=0.0279
2023-02-21 02:52:54,662 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:52:55,602 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94 pTM=0.0392
2023-02-21 02:52:56,539 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.6 pTM=0.038 tol=0.0595
2023-02-21 02:52:57,478 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.9 pTM=0.0373 tol=0.0312
2023-02-21 02:52:58,415 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.3 pTM=0.0378 tol=0.0336
2023-02-21 02:52:58,416 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:52:59,355 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.9 pTM=0.0368
2023-02-21 02:53:00,292 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.6 pTM=0.0368 tol=0.0854
2023-02-21 02:53:01,228 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.8 pTM=0.0368 tol=0.0446
2023-02-21 02:53:02,165 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.6 pTM=0.0376 tol=0.0282
2023-02-21 02:53:02,165 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:03,103 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.1 pTM=0.0384
2023-02-21 02:53:04,042 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.8 pTM=0.0386 tol=0.0503
2023-02-21 02:53:04,978 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.9 pTM=0.0387 tol=0.027
2023-02-21 02:53:05,916 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.5 pTM=0.0392 tol=0.0243
2023-02-21 02:53:05,916 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:06,856 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=96 pTM=0.039
2023-02-21 02:53:07,793 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96 pTM=0.0396 tol=0.103
2023-02-21 02:53:08,729 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.1 pTM=0.0396 tol=0.028
2023-02-21 02:53:09,666 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.5 pTM=0.0404 tol=0.0177
2023-02-21 02:53:09,667 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:09,669 reranking models by 'plddt' metric
2023-02-21 02:53:09,669 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.5 pTM=0.0404
2023-02-21 02:53:09,669 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.5 pTM=0.0392
2023-02-21 02:53:09,669 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=94.6 pTM=0.0376
2023-02-21 02:53:09,669 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=93.6 pTM=0.0383
2023-02-21 02:53:09,669 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=93.3 pTM=0.0378
2023-02-21 02:53:10,324 Query 26/80: 5h1h (length 16)
2023-02-21 02:53:10,924 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:53:20,541 Sleeping for 7s. Reason: PENDING
2023-02-21 02:53:29,377 Padding length to 25
2023-02-21 02:53:30,348 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.0338
2023-02-21 02:53:31,284 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.9 pTM=0.0327 tol=0.239
2023-02-21 02:53:32,219 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80 pTM=0.0321 tol=0.0437
2023-02-21 02:53:33,156 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.1 pTM=0.0317 tol=0.0876
2023-02-21 02:53:33,156 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:53:34,096 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.1 pTM=0.0354
2023-02-21 02:53:35,034 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.4 pTM=0.0331 tol=0.124
2023-02-21 02:53:35,972 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=79.1 pTM=0.0309 tol=0.162
2023-02-21 02:53:36,910 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.0283 tol=0.308
2023-02-21 02:53:36,910 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:53:37,849 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.8 pTM=0.0341
2023-02-21 02:53:38,787 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.6 pTM=0.0356 tol=0.112
2023-02-21 02:53:39,724 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.2 pTM=0.036 tol=0.0358
2023-02-21 02:53:40,661 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.2 pTM=0.0373 tol=0.136
2023-02-21 02:53:40,661 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:41,599 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.8 pTM=0.0355
2023-02-21 02:53:42,535 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.9 pTM=0.0368 tol=0.0834
2023-02-21 02:53:43,470 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.5 pTM=0.0371 tol=0.0423
2023-02-21 02:53:44,407 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.2 pTM=0.0382 tol=0.0501
2023-02-21 02:53:44,407 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:45,346 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.9 pTM=0.0353
2023-02-21 02:53:46,283 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.9 pTM=0.0367 tol=0.0593
2023-02-21 02:53:47,219 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0374 tol=0.0418
2023-02-21 02:53:48,156 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.5 pTM=0.0389 tol=0.0566
2023-02-21 02:53:48,156 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:53:48,158 reranking models by 'plddt' metric
2023-02-21 02:53:48,158 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.5 pTM=0.0389
2023-02-21 02:53:48,158 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=94.2 pTM=0.0382
2023-02-21 02:53:48,158 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.2 pTM=0.0373
2023-02-21 02:53:48,159 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=78.1 pTM=0.0317
2023-02-21 02:53:48,159 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=69.8 pTM=0.0283
2023-02-21 02:53:48,975 Query 27/80: 2lwv (length 17)
2023-02-21 02:53:49,569 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:53:59,173 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:54:08,788 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 02:54:19,409 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:54:28,021 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:54:35,645 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 02:54:41,262 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 02:54:51,876 Sleeping for 9s. Reason: PENDING
2023-02-21 02:55:02,724 Padding length to 25
2023-02-21 02:55:03,685 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.6 pTM=0.0363
2023-02-21 02:55:04,620 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.5 pTM=0.037 tol=0.122
2023-02-21 02:55:05,555 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.037 tol=0.0326
2023-02-21 02:55:06,532 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.1 pTM=0.0371 tol=0.0352
2023-02-21 02:55:06,532 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:55:07,472 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.7 pTM=0.037
2023-02-21 02:55:08,409 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.5 pTM=0.037 tol=0.161
2023-02-21 02:55:09,347 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.2 pTM=0.0369 tol=0.104
2023-02-21 02:55:10,289 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.9 pTM=0.0369 tol=0.0361
2023-02-21 02:55:10,289 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:55:11,228 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.9 pTM=0.0367
2023-02-21 02:55:12,165 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.6 pTM=0.0364 tol=0.0978
2023-02-21 02:55:13,102 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.6 pTM=0.0364 tol=0.0423
2023-02-21 02:55:14,040 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89.6 pTM=0.0364 tol=0.0235
2023-02-21 02:55:14,040 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:55:14,979 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.1 pTM=0.0373
2023-02-21 02:55:15,915 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.5 pTM=0.0378 tol=0.131
2023-02-21 02:55:16,851 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.6 pTM=0.038 tol=0.0303
2023-02-21 02:55:17,788 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.8 pTM=0.0381 tol=0.0221
2023-02-21 02:55:17,788 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:55:18,728 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.8 pTM=0.0367
2023-02-21 02:55:19,666 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.4 pTM=0.037 tol=0.0776
2023-02-21 02:55:20,602 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.5 pTM=0.0374 tol=0.0204
2023-02-21 02:55:21,548 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.0374 tol=0.0423
2023-02-21 02:55:21,548 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 02:55:21,550 reranking models by 'plddt' metric
2023-02-21 02:55:21,550 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.0374
2023-02-21 02:55:21,550 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.8 pTM=0.0381
2023-02-21 02:55:21,550 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=90.1 pTM=0.0371
2023-02-21 02:55:21,550 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=89.6 pTM=0.0364
2023-02-21 02:55:21,551 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=88.9 pTM=0.0369
2023-02-21 02:55:22,230 Query 28/80: 2nb5 (length 17)
2023-02-21 02:55:22,843 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:55:31,455 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:55:39,049 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:55:45,658 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:55:54,270 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:56:03,869 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:56:11,476 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:56:20,081 Sleeping for 10s. Reason: PENDING
2023-02-21 02:56:32,069 Padding length to 25
2023-02-21 02:56:33,042 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.3 pTM=0.0342
2023-02-21 02:56:33,979 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85 pTM=0.0333 tol=0.136
2023-02-21 02:56:34,920 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.6 pTM=0.0331 tol=0.0458
2023-02-21 02:56:35,857 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.9 pTM=0.0327 tol=0.0958
2023-02-21 02:56:35,857 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:56:36,796 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88 pTM=0.0349
2023-02-21 02:56:37,734 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.6 pTM=0.0317 tol=0.355
2023-02-21 02:56:38,670 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=84.8 pTM=0.0329 tol=0.856
2023-02-21 02:56:39,608 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.4 pTM=0.0353 tol=0.118
2023-02-21 02:56:39,608 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 02:56:40,553 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.9 pTM=0.0334
2023-02-21 02:56:41,490 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.6 pTM=0.0327 tol=0.12
2023-02-21 02:56:42,426 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.8 pTM=0.0325 tol=0.0352
2023-02-21 02:56:43,363 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=87.1 pTM=0.0321 tol=0.0327
2023-02-21 02:56:43,364 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 02:56:44,302 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.7 pTM=0.0341
2023-02-21 02:56:45,239 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.9 pTM=0.0327 tol=0.216
2023-02-21 02:56:46,174 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.4 pTM=0.0326 tol=0.37
2023-02-21 02:56:47,110 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=85.9 pTM=0.0334 tol=0.844
2023-02-21 02:56:47,110 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:56:48,050 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.8 pTM=0.0344
2023-02-21 02:56:48,987 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84.6 pTM=0.0324 tol=0.133
2023-02-21 02:56:49,923 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.2 pTM=0.0323 tol=0.0772
2023-02-21 02:56:50,860 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.2 pTM=0.0323 tol=0.113
2023-02-21 02:56:50,860 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:56:50,863 reranking models by 'plddt' metric
2023-02-21 02:56:50,863 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=89.4 pTM=0.0353
2023-02-21 02:56:50,863 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=87.1 pTM=0.0321
2023-02-21 02:56:50,863 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=85.9 pTM=0.0334
2023-02-21 02:56:50,863 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=82.9 pTM=0.0327
2023-02-21 02:56:50,863 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=82.2 pTM=0.0323
2023-02-21 02:56:51,538 Query 29/80: 1hvz (length 18)
2023-02-21 02:56:52,138 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:56:59,749 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:57:06,344 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:57:14,958 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:57:21,555 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:57:28,162 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:57:37,768 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:57:45,596 Padding length to 25
2023-02-21 02:57:46,568 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.2 pTM=0.0366
2023-02-21 02:57:47,504 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0364 tol=0.0685
2023-02-21 02:57:48,439 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.9 pTM=0.0368 tol=0.0765
2023-02-21 02:57:49,375 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.2 pTM=0.0373 tol=0.0316
2023-02-21 02:57:49,375 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:57:50,316 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0362
2023-02-21 02:57:51,253 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.7 pTM=0.036 tol=0.232
2023-02-21 02:57:52,190 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.036 tol=0.147
2023-02-21 02:57:53,128 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.9 pTM=0.0363 tol=0.104
2023-02-21 02:57:53,128 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:57:54,067 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.0363
2023-02-21 02:57:55,005 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.3 pTM=0.0357 tol=0.0751
2023-02-21 02:57:55,941 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.4 pTM=0.0361 tol=0.037
2023-02-21 02:57:56,878 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.6 pTM=0.0365 tol=0.062
2023-02-21 02:57:56,878 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:57:57,817 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.4 pTM=0.037
2023-02-21 02:57:58,753 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96 pTM=0.0372 tol=0.101
2023-02-21 02:57:59,690 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.2 pTM=0.0379 tol=0.0739
2023-02-21 02:58:00,626 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0382 tol=0.035
2023-02-21 02:58:00,626 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:58:01,565 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.0359
2023-02-21 02:58:02,502 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.9 pTM=0.0356 tol=0.1
2023-02-21 02:58:03,439 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0358 tol=0.0295
2023-02-21 02:58:04,377 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.2 pTM=0.0362 tol=0.028
2023-02-21 02:58:04,377 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:58:04,379 reranking models by 'plddt' metric
2023-02-21 02:58:04,379 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0382
2023-02-21 02:58:04,379 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.6 pTM=0.0365
2023-02-21 02:58:04,379 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=94.2 pTM=0.0362
2023-02-21 02:58:04,379 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.2 pTM=0.0373
2023-02-21 02:58:04,379 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=93.9 pTM=0.0363
2023-02-21 02:58:05,214 Query 30/80: 2atg (length 18)
2023-02-21 02:58:05,807 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:58:13,406 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:58:22,008 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:58:31,623 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:58:40,244 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:58:47,854 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 02:58:55,460 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:59:02,063 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 02:59:10,672 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 02:59:17,283 Sleeping for 8s. Reason: PENDING
2023-02-21 02:59:27,140 Padding length to 25
2023-02-21 02:59:28,115 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.1 pTM=0.0338
2023-02-21 02:59:29,048 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.7 pTM=0.0352 tol=0.278
2023-02-21 02:59:29,983 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.036 tol=0.073
2023-02-21 02:59:30,919 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.5 pTM=0.036 tol=0.0466
2023-02-21 02:59:30,919 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 02:59:31,863 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.4 pTM=0.032
2023-02-21 02:59:32,801 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.1 pTM=0.0347 tol=0.262
2023-02-21 02:59:33,738 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.7 pTM=0.0353 tol=0.111
2023-02-21 02:59:34,676 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92 pTM=0.0355 tol=0.0519
2023-02-21 02:59:34,676 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 02:59:35,616 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0365
2023-02-21 02:59:36,553 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.4 pTM=0.0363 tol=0.077
2023-02-21 02:59:37,490 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.8 pTM=0.0368 tol=0.0316
2023-02-21 02:59:38,426 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.1 pTM=0.0371 tol=0.0242
2023-02-21 02:59:38,427 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 02:59:39,365 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.3 pTM=0.0362
2023-02-21 02:59:40,301 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.0374 tol=0.151
2023-02-21 02:59:41,237 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.9 pTM=0.0383 tol=0.0883
2023-02-21 02:59:42,174 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.1 pTM=0.0384 tol=0.0652
2023-02-21 02:59:42,174 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 02:59:43,117 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.2 pTM=0.0338
2023-02-21 02:59:44,054 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.8 pTM=0.0343 tol=0.117
2023-02-21 02:59:44,990 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.9 pTM=0.035 tol=0.0391
2023-02-21 02:59:45,927 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.7 pTM=0.035 tol=0.031
2023-02-21 02:59:45,927 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 02:59:45,930 reranking models by 'plddt' metric
2023-02-21 02:59:45,930 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.1 pTM=0.0384
2023-02-21 02:59:45,930 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.1 pTM=0.0371
2023-02-21 02:59:45,930 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=92.7 pTM=0.035
2023-02-21 02:59:45,930 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.5 pTM=0.036
2023-02-21 02:59:45,930 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92 pTM=0.0355
2023-02-21 02:59:46,606 Query 31/80: 2lwt (length 18)
2023-02-21 02:59:47,204 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 02:59:56,804 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:00:07,407 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:00:14,008 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:00:23,621 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:00:32,221 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:00:42,829 Sleeping for 6s. Reason: PENDING
2023-02-21 03:00:50,839 Padding length to 25
2023-02-21 03:00:51,802 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.5 pTM=0.0298
2023-02-21 03:00:52,736 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.1 pTM=0.0327 tol=0.187
2023-02-21 03:00:53,671 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.8 pTM=0.0336 tol=0.166
2023-02-21 03:00:54,607 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.2 pTM=0.0341 tol=0.0304
2023-02-21 03:00:54,607 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:00:55,547 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.8 pTM=0.0344
2023-02-21 03:00:56,485 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.8 pTM=0.033 tol=0.27
2023-02-21 03:00:57,422 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.4 pTM=0.0319 tol=0.0753
2023-02-21 03:00:58,359 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=83.5 pTM=0.032 tol=0.097
2023-02-21 03:00:58,360 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 03:00:59,299 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.1 pTM=0.0331
2023-02-21 03:01:00,236 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.2 pTM=0.0343 tol=0.146
2023-02-21 03:01:01,173 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.1 pTM=0.0348 tol=0.0368
2023-02-21 03:01:02,110 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.9 pTM=0.0347 tol=0.0265
2023-02-21 03:01:02,110 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:01:03,049 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.2 pTM=0.0308
2023-02-21 03:01:03,985 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.8 pTM=0.0345 tol=1.12
2023-02-21 03:01:04,921 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.6 pTM=0.0356 tol=0.0495
2023-02-21 03:01:05,857 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.2 pTM=0.0361 tol=0.0205
2023-02-21 03:01:05,857 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:01:06,798 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.9 pTM=0.0341
2023-02-21 03:01:07,740 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.2 pTM=0.0357 tol=0.26
2023-02-21 03:01:08,678 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.2 pTM=0.0368 tol=0.0446
2023-02-21 03:01:09,616 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.4 pTM=0.0373 tol=0.0502
2023-02-21 03:01:09,616 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 03:01:09,618 reranking models by 'plddt' metric
2023-02-21 03:01:09,618 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.4 pTM=0.0373
2023-02-21 03:01:09,618 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=93.2 pTM=0.0361
2023-02-21 03:01:09,618 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=91.9 pTM=0.0347
2023-02-21 03:01:09,618 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.2 pTM=0.0341
2023-02-21 03:01:09,619 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=83.5 pTM=0.032
2023-02-21 03:01:10,297 Query 32/80: 2lye (length 18)
2023-02-21 03:01:10,899 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:01:18,493 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:01:27,113 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:01:36,732 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:01:45,333 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:01:51,942 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:02:00,543 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:02:10,147 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:02:20,995 Padding length to 25
2023-02-21 03:02:21,972 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.7 pTM=0.0374
2023-02-21 03:02:22,909 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.4 pTM=0.0369 tol=0.0583
2023-02-21 03:02:23,845 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.2 pTM=0.037 tol=0.0488
2023-02-21 03:02:24,781 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.6 pTM=0.0374 tol=0.0195
2023-02-21 03:02:24,781 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:02:25,722 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.8 pTM=0.0367
2023-02-21 03:02:26,660 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94 pTM=0.0359 tol=0.22
2023-02-21 03:02:27,597 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.0357 tol=0.18
2023-02-21 03:02:28,536 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.3 pTM=0.0359 tol=0.16
2023-02-21 03:02:28,537 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 03:02:29,478 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.9 pTM=0.0364
2023-02-21 03:02:30,421 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.8 pTM=0.0358 tol=0.0905
2023-02-21 03:02:31,359 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.8 pTM=0.0358 tol=0.13
2023-02-21 03:02:32,297 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.8 pTM=0.0359 tol=0.0385
2023-02-21 03:02:32,298 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 03:02:33,242 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.8 pTM=0.038
2023-02-21 03:02:34,182 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.6 pTM=0.0376 tol=0.0813
2023-02-21 03:02:35,117 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.8 pTM=0.038 tol=0.24
2023-02-21 03:02:36,054 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.9 pTM=0.0385 tol=0.115
2023-02-21 03:02:36,054 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 03:02:36,994 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95.2 pTM=0.0376
2023-02-21 03:02:37,931 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.1 pTM=0.0369 tol=0.0728
2023-02-21 03:02:38,868 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.9 pTM=0.037 tol=0.0255
2023-02-21 03:02:39,805 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.3 pTM=0.0375 tol=0.0303
2023-02-21 03:02:39,805 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:02:39,807 reranking models by 'plddt' metric
2023-02-21 03:02:39,807 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.9 pTM=0.0385
2023-02-21 03:02:39,807 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.8 pTM=0.0359
2023-02-21 03:02:39,807 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=95.3 pTM=0.0375
2023-02-21 03:02:39,808 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.6 pTM=0.0374
2023-02-21 03:02:39,808 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=94.3 pTM=0.0359
2023-02-21 03:02:40,627 Query 33/80: 2lyf (length 18)
2023-02-21 03:02:41,236 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:02:47,847 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:02:58,464 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:03:04,051 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:03:09,664 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:03:16,270 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:03:25,878 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:03:32,482 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:03:44,361 Padding length to 25
2023-02-21 03:03:45,329 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.2 pTM=0.0366
2023-02-21 03:03:46,261 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0364 tol=0.0685
2023-02-21 03:03:47,197 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.9 pTM=0.0368 tol=0.0765
2023-02-21 03:03:48,134 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.2 pTM=0.0373 tol=0.0316
2023-02-21 03:03:48,134 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:03:49,075 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0362
2023-02-21 03:03:50,012 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.7 pTM=0.036 tol=0.232
2023-02-21 03:03:50,950 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.036 tol=0.147
2023-02-21 03:03:51,890 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.9 pTM=0.0363 tol=0.104
2023-02-21 03:03:51,890 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 03:03:52,832 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.0363
2023-02-21 03:03:53,769 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.3 pTM=0.0357 tol=0.0751
2023-02-21 03:03:54,706 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.4 pTM=0.0361 tol=0.037
2023-02-21 03:03:55,647 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.6 pTM=0.0365 tol=0.062
2023-02-21 03:03:55,647 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 03:03:56,585 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.4 pTM=0.037
2023-02-21 03:03:57,521 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96 pTM=0.0372 tol=0.101
2023-02-21 03:03:58,457 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.2 pTM=0.0379 tol=0.0739
2023-02-21 03:03:59,394 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0382 tol=0.035
2023-02-21 03:03:59,394 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:04:00,333 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.0359
2023-02-21 03:04:01,270 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.9 pTM=0.0356 tol=0.1
2023-02-21 03:04:02,206 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0358 tol=0.0295
2023-02-21 03:04:03,143 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.2 pTM=0.0362 tol=0.028
2023-02-21 03:04:03,143 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:04:03,146 reranking models by 'plddt' metric
2023-02-21 03:04:03,146 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0382
2023-02-21 03:04:03,146 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.6 pTM=0.0365
2023-02-21 03:04:03,146 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=94.2 pTM=0.0362
2023-02-21 03:04:03,146 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.2 pTM=0.0373
2023-02-21 03:04:03,146 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=93.9 pTM=0.0363
2023-02-21 03:04:03,828 Query 34/80: 2lzi (length 18)
2023-02-21 03:04:04,432 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:04:13,034 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:04:20,641 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:04:28,235 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:04:38,838 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:04:44,442 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:04:54,043 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:05:01,637 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:05:08,234 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:05:15,065 Padding length to 25
2023-02-21 03:05:16,040 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.1 pTM=0.0345
2023-02-21 03:05:16,970 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.9 pTM=0.0352 tol=0.218
2023-02-21 03:05:17,899 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.5 pTM=0.0358 tol=0.158
2023-02-21 03:05:18,835 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.5 pTM=0.0363 tol=0.0795
2023-02-21 03:05:18,835 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:05:19,775 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=57.7 pTM=0.0248
2023-02-21 03:05:20,713 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.3 pTM=0.0335 tol=1.7
2023-02-21 03:05:21,650 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.2 pTM=0.0345 tol=0.109
2023-02-21 03:05:22,588 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92 pTM=0.0353 tol=0.0856
2023-02-21 03:05:22,588 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 03:05:23,531 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0364
2023-02-21 03:05:24,468 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.2 pTM=0.0362 tol=0.0817
2023-02-21 03:05:25,409 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.5 pTM=0.0363 tol=0.0294
2023-02-21 03:05:26,346 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.0368 tol=0.0323
2023-02-21 03:05:26,346 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 03:05:27,285 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.5 pTM=0.0364
2023-02-21 03:05:28,221 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.9 pTM=0.037 tol=0.152
2023-02-21 03:05:29,157 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.8 pTM=0.0374 tol=0.114
2023-02-21 03:05:30,094 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0383 tol=0.0706
2023-02-21 03:05:30,095 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:05:31,034 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.3 pTM=0.0339
2023-02-21 03:05:31,971 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.4 pTM=0.0341 tol=0.104
2023-02-21 03:05:32,908 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.5 pTM=0.0348 tol=0.047
2023-02-21 03:05:33,845 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.5 pTM=0.0355 tol=0.0426
2023-02-21 03:05:33,845 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:05:33,847 reranking models by 'plddt' metric
2023-02-21 03:05:33,847 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0383
2023-02-21 03:05:33,847 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.0368
2023-02-21 03:05:33,847 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=93.5 pTM=0.0355
2023-02-21 03:05:33,847 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.5 pTM=0.0363
2023-02-21 03:05:33,847 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92 pTM=0.0353
2023-02-21 03:05:34,690 Query 35/80: 2m77 (length 18)
2023-02-21 03:05:35,287 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:05:42,891 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:05:49,509 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:05:58,214 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:06:06,825 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:06:16,436 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:06:22,048 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:06:32,670 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:06:43,287 Sleeping for 10s. Reason: PENDING
2023-02-21 03:06:55,165 Padding length to 25
2023-02-21 03:06:56,128 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.5 pTM=0.0366
2023-02-21 03:06:57,058 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.1 pTM=0.0364 tol=0.0884
2023-02-21 03:06:57,987 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.1 pTM=0.0367 tol=0.0933
2023-02-21 03:06:58,922 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.1 pTM=0.0372 tol=0.0378
2023-02-21 03:06:58,922 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:06:59,860 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.4 pTM=0.0362
2023-02-21 03:07:00,796 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.6 pTM=0.0353 tol=0.182
2023-02-21 03:07:01,732 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.4 pTM=0.0357 tol=0.155
2023-02-21 03:07:02,668 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.8 pTM=0.0363 tol=0.0905
2023-02-21 03:07:02,668 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:07:03,606 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.036
2023-02-21 03:07:04,542 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.0355 tol=0.084
2023-02-21 03:07:05,477 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.7 pTM=0.0359 tol=0.0519
2023-02-21 03:07:06,414 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.0359 tol=0.0518
2023-02-21 03:07:06,414 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:07:07,353 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.8 pTM=0.0363
2023-02-21 03:07:08,288 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.3 pTM=0.037 tol=0.118
2023-02-21 03:07:09,223 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.7 pTM=0.0377 tol=0.0624
2023-02-21 03:07:10,158 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.8 pTM=0.0378 tol=0.03
2023-02-21 03:07:10,158 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:07:11,096 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.6 pTM=0.036
2023-02-21 03:07:12,033 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.2 pTM=0.0359 tol=0.0753
2023-02-21 03:07:12,968 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.3 pTM=0.0363 tol=0.0421
2023-02-21 03:07:13,904 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.9 pTM=0.0367 tol=0.0626
2023-02-21 03:07:13,904 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:07:13,911 reranking models by 'plddt' metric
2023-02-21 03:07:13,911 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.8 pTM=0.0378
2023-02-21 03:07:13,911 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=94.9 pTM=0.0367
2023-02-21 03:07:13,911 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.0359
2023-02-21 03:07:13,911 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.1 pTM=0.0372
2023-02-21 03:07:13,911 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=93.8 pTM=0.0363
2023-02-21 03:07:14,583 Query 36/80: 2m78 (length 18)
2023-02-21 03:07:15,190 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:07:22,817 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:07:32,445 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:07:43,057 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:07:53,721 Sleeping for 10s. Reason: PENDING
2023-02-21 03:08:05,731 Padding length to 25
2023-02-21 03:08:06,699 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0362
2023-02-21 03:08:07,628 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.2 pTM=0.0364 tol=0.11
2023-02-21 03:08:08,558 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.4 pTM=0.0368 tol=0.0648
2023-02-21 03:08:09,492 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.5 pTM=0.0372 tol=0.0476
2023-02-21 03:08:09,492 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:08:10,431 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.4 pTM=0.0356
2023-02-21 03:08:11,374 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.6 pTM=0.0355 tol=0.147
2023-02-21 03:08:12,309 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.8 pTM=0.0359 tol=0.101
2023-02-21 03:08:13,246 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.2 pTM=0.0363 tol=0.0587
2023-02-21 03:08:13,246 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 03:08:14,228 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0356
2023-02-21 03:08:15,164 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.2 pTM=0.0354 tol=0.0675
2023-02-21 03:08:16,099 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.5 pTM=0.0357 tol=0.0396
2023-02-21 03:08:17,035 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.6 pTM=0.0359 tol=0.102
2023-02-21 03:08:17,035 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 03:08:17,978 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.2 pTM=0.0363
2023-02-21 03:08:18,913 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95 pTM=0.0364 tol=0.0961
2023-02-21 03:08:19,848 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.6 pTM=0.0372 tol=0.0605
2023-02-21 03:08:20,782 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.6 pTM=0.0375 tol=0.0347
2023-02-21 03:08:20,783 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:21,721 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.7 pTM=0.0356
2023-02-21 03:08:22,656 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.1 pTM=0.0353 tol=0.12
2023-02-21 03:08:23,591 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93 pTM=0.0356 tol=0.0286
2023-02-21 03:08:24,527 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.2 pTM=0.0356 tol=0.0363
2023-02-21 03:08:24,527 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:24,529 reranking models by 'plddt' metric
2023-02-21 03:08:24,529 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.6 pTM=0.0375
2023-02-21 03:08:24,529 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.6 pTM=0.0359
2023-02-21 03:08:24,529 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=93.5 pTM=0.0372
2023-02-21 03:08:24,529 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.2 pTM=0.0363
2023-02-21 03:08:24,530 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=93.2 pTM=0.0356
2023-02-21 03:08:25,210 Query 37/80: 2m79 (length 18)
2023-02-21 03:08:25,815 Sleeping for 7s. Reason: PENDING
2023-02-21 03:08:34,634 Padding length to 25
2023-02-21 03:08:35,590 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.1 pTM=0.0349
2023-02-21 03:08:36,524 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.2 pTM=0.0354 tol=0.128
2023-02-21 03:08:37,458 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.3 pTM=0.0356 tol=0.0854
2023-02-21 03:08:38,392 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.4 pTM=0.036 tol=0.0781
2023-02-21 03:08:38,392 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:08:39,331 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.4 pTM=0.0351
2023-02-21 03:08:40,267 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.4 pTM=0.0348 tol=0.194
2023-02-21 03:08:41,202 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.9 pTM=0.0353 tol=0.0656
2023-02-21 03:08:42,138 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.3 pTM=0.0356 tol=0.0415
2023-02-21 03:08:42,138 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:43,076 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.1 pTM=0.0349
2023-02-21 03:08:44,012 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.2 pTM=0.0348 tol=0.0618
2023-02-21 03:08:44,946 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.0348 tol=0.0533
2023-02-21 03:08:45,881 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.8 pTM=0.0347 tol=0.0557
2023-02-21 03:08:45,882 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:46,819 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.1 pTM=0.0354
2023-02-21 03:08:47,754 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.9 pTM=0.0357 tol=0.118
2023-02-21 03:08:48,688 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.3 pTM=0.0363 tol=0.0544
2023-02-21 03:08:49,623 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.3 pTM=0.0367 tol=0.0266
2023-02-21 03:08:49,623 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:50,561 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.4 pTM=0.0353
2023-02-21 03:08:51,496 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.9 pTM=0.0352 tol=0.109
2023-02-21 03:08:52,430 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.8 pTM=0.0352 tol=0.0355
2023-02-21 03:08:53,366 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93 pTM=0.0353 tol=0.0409
2023-02-21 03:08:53,366 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:08:53,368 reranking models by 'plddt' metric
2023-02-21 03:08:53,368 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=94.3 pTM=0.0367
2023-02-21 03:08:53,368 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=93 pTM=0.0353
2023-02-21 03:08:53,368 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=92.8 pTM=0.0347
2023-02-21 03:08:53,369 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.4 pTM=0.036
2023-02-21 03:08:53,369 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92.3 pTM=0.0356
2023-02-21 03:08:54,179 Query 38/80: 5h1i (length 18)
2023-02-21 03:08:54,779 Sleeping for 10s. Reason: PENDING
2023-02-21 03:09:06,671 Padding length to 25
2023-02-21 03:09:07,624 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=57.3 pTM=0.0231
2023-02-21 03:09:08,558 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=57.8 pTM=0.0237 tol=0.867
2023-02-21 03:09:09,492 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=57.6 pTM=0.0245 tol=1.04
2023-02-21 03:09:10,426 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=57.3 pTM=0.0242 tol=0.916
2023-02-21 03:09:10,426 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:09:11,364 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.0307
2023-02-21 03:09:12,300 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.2 pTM=0.0307 tol=0.407
2023-02-21 03:09:13,235 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81.4 pTM=0.0306 tol=0.0805
2023-02-21 03:09:14,171 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=79.4 pTM=0.0301 tol=0.0735
2023-02-21 03:09:14,171 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:15,108 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=66.2 pTM=0.0236
2023-02-21 03:09:16,044 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.1 pTM=0.0316 tol=1.39
2023-02-21 03:09:16,980 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.8 pTM=0.0332 tol=0.125
2023-02-21 03:09:17,917 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.1 pTM=0.0341 tol=0.112
2023-02-21 03:09:17,917 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:18,854 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=61.7 pTM=0.0223
2023-02-21 03:09:19,789 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.4 pTM=0.0319 tol=2
2023-02-21 03:09:20,723 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.7 pTM=0.0337 tol=0.0944
2023-02-21 03:09:21,658 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.4 pTM=0.0341 tol=0.0413
2023-02-21 03:09:21,659 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:22,597 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.0226
2023-02-21 03:09:23,533 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=85.9 pTM=0.0316 tol=1.98
2023-02-21 03:09:24,467 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.2 pTM=0.0345 tol=0.17
2023-02-21 03:09:25,402 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.2 pTM=0.0353 tol=0.0824
2023-02-21 03:09:25,403 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:25,405 reranking models by 'plddt' metric
2023-02-21 03:09:25,405 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.2 pTM=0.0353
2023-02-21 03:09:25,405 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.4 pTM=0.0341
2023-02-21 03:09:25,405 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=91.1 pTM=0.0341
2023-02-21 03:09:25,405 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=79.4 pTM=0.0301
2023-02-21 03:09:25,405 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=57.3 pTM=0.0242
2023-02-21 03:09:26,079 Query 39/80: 6pin (length 18)
2023-02-21 03:09:27,920 Padding length to 25
2023-02-21 03:09:28,868 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.5 pTM=0.0342
2023-02-21 03:09:29,853 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0353 tol=0.122
2023-02-21 03:09:30,786 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.4 pTM=0.0357 tol=0.073
2023-02-21 03:09:31,721 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.3 pTM=0.0359 tol=0.0418
2023-02-21 03:09:31,721 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:09:32,659 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.6 pTM=0.0343
2023-02-21 03:09:33,596 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.4 pTM=0.0358 tol=0.131
2023-02-21 03:09:34,531 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.8 pTM=0.0359 tol=0.0434
2023-02-21 03:09:35,469 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.7 pTM=0.0359 tol=0.0543
2023-02-21 03:09:35,469 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:36,407 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0353
2023-02-21 03:09:37,343 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.0356 tol=0.0721
2023-02-21 03:09:38,278 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.5 pTM=0.0364 tol=0.0416
2023-02-21 03:09:39,214 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.0363 tol=0.0262
2023-02-21 03:09:39,214 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:40,152 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.6 pTM=0.036
2023-02-21 03:09:41,086 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.7 pTM=0.0364 tol=0.0679
2023-02-21 03:09:42,026 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.1 pTM=0.0364 tol=0.0241
2023-02-21 03:09:42,960 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.9 pTM=0.0363 tol=0.0325
2023-02-21 03:09:42,961 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:43,899 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.8 pTM=0.035
2023-02-21 03:09:44,834 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.3 pTM=0.0365 tol=0.0802
2023-02-21 03:09:45,769 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.9 pTM=0.0372 tol=0.0345
2023-02-21 03:09:46,705 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.8 pTM=0.037 tol=0.0223
2023-02-21 03:09:46,705 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:46,707 reranking models by 'plddt' metric
2023-02-21 03:09:46,707 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.8 pTM=0.037
2023-02-21 03:09:46,707 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.0363
2023-02-21 03:09:46,707 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.9 pTM=0.0363
2023-02-21 03:09:46,708 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.7 pTM=0.0359
2023-02-21 03:09:46,708 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.3 pTM=0.0359
2023-02-21 03:09:47,549 Query 40/80: 6pio (length 18)
2023-02-21 03:09:49,407 Padding length to 25
2023-02-21 03:09:50,365 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93 pTM=0.0346
2023-02-21 03:09:51,300 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.2 pTM=0.0358 tol=0.102
2023-02-21 03:09:52,234 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.3 pTM=0.036 tol=0.0759
2023-02-21 03:09:53,174 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.7 pTM=0.0364 tol=0.112
2023-02-21 03:09:53,174 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:09:54,113 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0347
2023-02-21 03:09:55,048 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.7 pTM=0.0364 tol=0.134
2023-02-21 03:09:55,984 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.8 pTM=0.0361 tol=0.0472
2023-02-21 03:09:56,921 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.8 pTM=0.0361 tol=0.0513
2023-02-21 03:09:56,921 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:09:57,860 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.0363
2023-02-21 03:09:58,796 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.3 pTM=0.0366 tol=0.0682
2023-02-21 03:09:59,731 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.7 pTM=0.0367 tol=0.0552
2023-02-21 03:10:00,667 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.9 pTM=0.037 tol=0.0255
2023-02-21 03:10:00,667 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:01,605 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.3 pTM=0.0368
2023-02-21 03:10:02,541 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.0367 tol=0.08
2023-02-21 03:10:03,475 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.2 pTM=0.0367 tol=0.0388
2023-02-21 03:10:04,468 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.2 pTM=0.0365 tol=0.0305
2023-02-21 03:10:04,468 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 03:10:05,408 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.4 pTM=0.0356
2023-02-21 03:10:06,344 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.4 pTM=0.037 tol=0.0828
2023-02-21 03:10:07,280 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.7 pTM=0.037 tol=0.0296
2023-02-21 03:10:08,216 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.9 pTM=0.0374 tol=0.0435
2023-02-21 03:10:08,216 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:08,218 reranking models by 'plddt' metric
2023-02-21 03:10:08,218 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=95.9 pTM=0.037
2023-02-21 03:10:08,218 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.9 pTM=0.0374
2023-02-21 03:10:08,218 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.2 pTM=0.0365
2023-02-21 03:10:08,218 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.8 pTM=0.0361
2023-02-21 03:10:08,218 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=93.7 pTM=0.0364
2023-02-21 03:10:08,893 Query 41/80: 6pip (length 18)
2023-02-21 03:10:10,882 Padding length to 25
2023-02-21 03:10:11,833 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0349
2023-02-21 03:10:12,767 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.2 pTM=0.0357 tol=0.102
2023-02-21 03:10:13,701 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.5 pTM=0.036 tol=0.0843
2023-02-21 03:10:14,636 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.5 pTM=0.0362 tol=0.037
2023-02-21 03:10:14,636 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:10:15,575 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.2 pTM=0.035
2023-02-21 03:10:16,511 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.4 pTM=0.036 tol=0.14
2023-02-21 03:10:17,446 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95 pTM=0.0362 tol=0.0559
2023-02-21 03:10:18,382 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.8 pTM=0.0361 tol=0.0589
2023-02-21 03:10:18,382 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:19,320 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.2 pTM=0.0363
2023-02-21 03:10:20,256 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.1 pTM=0.0363 tol=0.0687
2023-02-21 03:10:21,191 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.7 pTM=0.0366 tol=0.0415
2023-02-21 03:10:22,127 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.6 pTM=0.0368 tol=0.0336
2023-02-21 03:10:22,127 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:23,064 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.2 pTM=0.0368
2023-02-21 03:10:23,999 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.8 pTM=0.0361 tol=0.076
2023-02-21 03:10:24,933 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.2 pTM=0.0363 tol=0.0309
2023-02-21 03:10:25,868 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.1 pTM=0.0362 tol=0.053
2023-02-21 03:10:25,868 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:26,806 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.2 pTM=0.0359
2023-02-21 03:10:27,742 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.1 pTM=0.0368 tol=0.087
2023-02-21 03:10:28,677 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.8 pTM=0.0372 tol=0.0359
2023-02-21 03:10:29,613 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96 pTM=0.0378 tol=0.0455
2023-02-21 03:10:29,614 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:10:29,616 reranking models by 'plddt' metric
2023-02-21 03:10:29,616 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96 pTM=0.0378
2023-02-21 03:10:29,616 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.6 pTM=0.0368
2023-02-21 03:10:29,616 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.1 pTM=0.0362
2023-02-21 03:10:29,616 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.8 pTM=0.0361
2023-02-21 03:10:29,616 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.5 pTM=0.0362
2023-02-21 03:10:30,284 Query 42/80: 7f32 (length 18)
2023-02-21 03:10:30,894 Sleeping for 10s. Reason: PENDING
2023-02-21 03:10:41,502 Sleeping for 9s. Reason: RUNNING
2023-02-21 03:10:52,362 Padding length to 25
2023-02-21 03:10:53,327 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.8 pTM=0.0352
2023-02-21 03:10:54,260 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0356 tol=0.0761
2023-02-21 03:10:55,193 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.2 pTM=0.0363 tol=0.0627
2023-02-21 03:10:56,127 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.3 pTM=0.0365 tol=0.0215
2023-02-21 03:10:56,127 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:10:57,066 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.5 pTM=0.0359
2023-02-21 03:10:58,002 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.9 pTM=0.0357 tol=0.174
2023-02-21 03:10:58,937 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.2 pTM=0.0366 tol=0.183
2023-02-21 03:10:59,873 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.4 pTM=0.0372 tol=0.0917
2023-02-21 03:10:59,874 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:00,812 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.4 pTM=0.0355
2023-02-21 03:11:01,748 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.7 pTM=0.0359 tol=0.0677
2023-02-21 03:11:02,684 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.1 pTM=0.0365 tol=0.0353
2023-02-21 03:11:03,619 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.9 pTM=0.0363 tol=0.0336
2023-02-21 03:11:03,620 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:04,557 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.2 pTM=0.0363
2023-02-21 03:11:05,492 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.4 pTM=0.0369 tol=0.0963
2023-02-21 03:11:06,426 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.8 pTM=0.038 tol=0.051
2023-02-21 03:11:07,362 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.8 pTM=0.0379 tol=0.0175
2023-02-21 03:11:07,362 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:08,301 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=96.1 pTM=0.0366
2023-02-21 03:11:09,236 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.7 pTM=0.0361 tol=0.132
2023-02-21 03:11:10,178 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.1 pTM=0.0367 tol=0.0555
2023-02-21 03:11:11,114 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.4 pTM=0.0374 tol=0.0547
2023-02-21 03:11:11,114 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:11,116 reranking models by 'plddt' metric
2023-02-21 03:11:11,116 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.8 pTM=0.0379
2023-02-21 03:11:11,116 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=96.4 pTM=0.0374
2023-02-21 03:11:11,116 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95.9 pTM=0.0363
2023-02-21 03:11:11,117 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.4 pTM=0.0372
2023-02-21 03:11:11,117 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.3 pTM=0.0365
2023-02-21 03:11:11,941 Query 43/80: 2ll5 (length 22)
2023-02-21 03:11:12,545 Sleeping for 7s. Reason: PENDING
2023-02-21 03:11:21,408 Padding length to 25
2023-02-21 03:11:22,362 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.6 pTM=0.214
2023-02-21 03:11:23,297 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.9 pTM=0.251 tol=1.09
2023-02-21 03:11:24,231 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.4 pTM=0.267 tol=0.136
2023-02-21 03:11:25,169 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.9 pTM=0.269 tol=0.0567
2023-02-21 03:11:25,169 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:11:26,108 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.6 pTM=0.247
2023-02-21 03:11:27,044 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.8 pTM=0.281 tol=0.518
2023-02-21 03:11:27,980 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.8 pTM=0.285 tol=0.0783
2023-02-21 03:11:28,916 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.2 pTM=0.287 tol=0.0614
2023-02-21 03:11:28,917 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:29,855 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92 pTM=0.249
2023-02-21 03:11:30,790 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.5 pTM=0.278 tol=0.192
2023-02-21 03:11:31,727 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.7 pTM=0.277 tol=0.034
2023-02-21 03:11:32,663 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.276 tol=0.0282
2023-02-21 03:11:32,663 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:33,601 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.6 pTM=0.268
2023-02-21 03:11:34,535 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.2 pTM=0.288 tol=0.2
2023-02-21 03:11:35,470 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.8 pTM=0.292 tol=0.0393
2023-02-21 03:11:36,404 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.292 tol=0.0247
2023-02-21 03:11:36,404 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:11:37,429 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95 pTM=0.272
2023-02-21 03:11:38,366 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.1 pTM=0.287 tol=0.193
2023-02-21 03:11:39,301 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.4 pTM=0.287 tol=0.0397
2023-02-21 03:11:40,237 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.6 pTM=0.29 tol=0.0288
2023-02-21 03:11:40,237 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 03:11:40,239 reranking models by 'plddt' metric
2023-02-21 03:11:40,239 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.6 pTM=0.29
2023-02-21 03:11:40,239 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.292
2023-02-21 03:11:40,239 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=95.2 pTM=0.287
2023-02-21 03:11:40,240 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.276
2023-02-21 03:11:40,240 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=91.9 pTM=0.269
2023-02-21 03:11:40,921 Query 44/80: 2n07.1_X (length 22)
2023-02-21 03:11:41,524 Sleeping for 9s. Reason: PENDING
2023-02-21 03:11:51,128 Sleeping for 7s. Reason: RUNNING
2023-02-21 03:11:59,976 Padding length to 25
2023-02-21 03:12:00,942 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=63.1 pTM=0.106
2023-02-21 03:12:01,873 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=62.9 pTM=0.111 tol=0.571
2023-02-21 03:12:02,807 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.2 pTM=0.116 tol=1.57
2023-02-21 03:12:03,741 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.113 tol=0.233
2023-02-21 03:12:03,741 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:12:04,679 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=62.7 pTM=0.115
2023-02-21 03:12:05,615 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=72.3 pTM=0.171 tol=1.84
2023-02-21 03:12:06,550 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.2 pTM=0.182 tol=0.561
2023-02-21 03:12:07,487 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=75.4 pTM=0.186 tol=0.0949
2023-02-21 03:12:07,487 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:08,426 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=59.4 pTM=0.101
2023-02-21 03:12:09,361 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=57.7 pTM=0.0948 tol=0.413
2023-02-21 03:12:10,300 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=58 pTM=0.0959 tol=0.489
2023-02-21 03:12:11,235 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=57.9 pTM=0.0955 tol=0.374
2023-02-21 03:12:11,235 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:12,172 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71 pTM=0.119
2023-02-21 03:12:13,107 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=66.8 pTM=0.112 tol=0.476
2023-02-21 03:12:14,041 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.3 pTM=0.109 tol=0.457
2023-02-21 03:12:14,976 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=65.2 pTM=0.108 tol=0.262
2023-02-21 03:12:14,976 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:15,913 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=62 pTM=0.103
2023-02-21 03:12:16,848 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.5 pTM=0.116 tol=0.694
2023-02-21 03:12:17,783 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=65.8 pTM=0.113 tol=0.314
2023-02-21 03:12:18,718 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=65.9 pTM=0.113 tol=0.276
2023-02-21 03:12:18,718 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:18,721 reranking models by 'plddt' metric
2023-02-21 03:12:18,721 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=75.4 pTM=0.186
2023-02-21 03:12:18,721 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=65.9 pTM=0.113
2023-02-21 03:12:18,721 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=65.2 pTM=0.108
2023-02-21 03:12:18,721 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=63.5 pTM=0.113
2023-02-21 03:12:18,721 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=57.9 pTM=0.0955
2023-02-21 03:12:19,564 Query 45/80: 5kx1 (length 22)
2023-02-21 03:12:20,381 Sleeping for 6s. Reason: PENDING
2023-02-21 03:12:28,234 Padding length to 25
2023-02-21 03:12:29,185 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.9 pTM=0.184
2023-02-21 03:12:30,120 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.9 pTM=0.197 tol=0.16
2023-02-21 03:12:31,053 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.1 pTM=0.197 tol=0.0564
2023-02-21 03:12:31,988 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.4 pTM=0.2 tol=0.041
2023-02-21 03:12:31,988 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 03:12:32,927 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.1 pTM=0.17
2023-02-21 03:12:33,863 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.9 pTM=0.205 tol=0.221
2023-02-21 03:12:34,799 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.5 pTM=0.206 tol=0.0428
2023-02-21 03:12:35,735 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.208 tol=0.0282
2023-02-21 03:12:35,735 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:36,673 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.7 pTM=0.172
2023-02-21 03:12:37,609 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.2 pTM=0.188 tol=0.812
2023-02-21 03:12:38,544 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.6 pTM=0.206 tol=0.296
2023-02-21 03:12:39,480 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.3 pTM=0.209 tol=0.0531
2023-02-21 03:12:39,480 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:40,422 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.8 pTM=0.174
2023-02-21 03:12:41,357 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.1 pTM=0.202 tol=0.315
2023-02-21 03:12:42,292 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.4 pTM=0.201 tol=0.074
2023-02-21 03:12:43,227 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.9 pTM=0.204 tol=0.0407
2023-02-21 03:12:43,227 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:44,165 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=76.9 pTM=0.152
2023-02-21 03:12:45,100 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.2 pTM=0.185 tol=0.848
2023-02-21 03:12:46,035 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.4 pTM=0.195 tol=0.163
2023-02-21 03:12:46,972 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.1 pTM=0.199 tol=0.0403
2023-02-21 03:12:46,972 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 03:12:46,974 reranking models by 'plddt' metric
2023-02-21 03:12:46,974 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.3 pTM=0.209
2023-02-21 03:12:46,974 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=92.9 pTM=0.204
2023-02-21 03:12:46,974 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=92.1 pTM=0.199
2023-02-21 03:12:46,974 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.208
2023-02-21 03:12:46,974 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.4 pTM=0.2
2023-02-21 03:12:47,656 Query 46/80: 5kwz (length 26)
2023-02-21 03:12:48,308 Sleeping for 8s. Reason: PENDING
2023-02-21 03:12:58,311 Padding length to 36
2023-02-21 03:13:05,715 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.9 pTM=0.354
2023-02-21 03:13:06,596 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.6 pTM=0.374 tol=0.111
2023-02-21 03:13:07,475 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.381 tol=0.0382
2023-02-21 03:13:08,359 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.8 pTM=0.381 tol=0.0337
2023-02-21 03:13:08,359 alphafold2_ptm_model_1_seed_000 took 10.0s (3 recycles)
2023-02-21 03:13:09,246 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.9 pTM=0.386
2023-02-21 03:13:10,129 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.7 pTM=0.402 tol=0.122
2023-02-21 03:13:11,011 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.1 pTM=0.41 tol=0.0433
2023-02-21 03:13:11,894 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.8 pTM=0.408 tol=0.0261
2023-02-21 03:13:11,894 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:12,780 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.8 pTM=0.39
2023-02-21 03:13:13,665 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.404 tol=0.0885
2023-02-21 03:13:14,547 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.3 pTM=0.403 tol=0.0521
2023-02-21 03:13:15,430 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.3 pTM=0.409 tol=0.0353
2023-02-21 03:13:15,430 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:16,314 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.3 pTM=0.381
2023-02-21 03:13:17,194 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.3 pTM=0.404 tol=0.14
2023-02-21 03:13:18,074 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.2 pTM=0.422 tol=0.0703
2023-02-21 03:13:18,954 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.2 pTM=0.423 tol=0.0365
2023-02-21 03:13:18,955 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:19,840 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.8 pTM=0.392
2023-02-21 03:13:20,723 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.9 pTM=0.41 tol=0.0981
2023-02-21 03:13:21,605 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.2 pTM=0.412 tol=0.0442
2023-02-21 03:13:22,487 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.413 tol=0.0251
2023-02-21 03:13:22,487 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:22,490 reranking models by 'plddt' metric
2023-02-21 03:13:22,491 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.413
2023-02-21 03:13:22,491 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.3 pTM=0.409
2023-02-21 03:13:22,491 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.2 pTM=0.423
2023-02-21 03:13:22,491 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.8 pTM=0.408
2023-02-21 03:13:22,491 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.8 pTM=0.381
2023-02-21 03:13:23,239 Query 47/80: 7m3u (length 27)
2023-02-21 03:13:23,839 Sleeping for 8s. Reason: PENDING
2023-02-21 03:13:32,449 Sleeping for 8s. Reason: RUNNING
2023-02-21 03:13:42,335 Padding length to 36
2023-02-21 03:13:43,262 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=60.8 pTM=0.183
2023-02-21 03:13:44,141 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=65.1 pTM=0.205 tol=1.13
2023-02-21 03:13:45,079 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.8 pTM=0.207 tol=0.388
2023-02-21 03:13:45,959 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=67.1 pTM=0.215 tol=0.509
2023-02-21 03:13:45,959 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:13:46,848 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=68.6 pTM=0.231
2023-02-21 03:13:47,735 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.4 pTM=0.218 tol=0.783
2023-02-21 03:13:48,617 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.212 tol=0.306
2023-02-21 03:13:49,499 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=65.9 pTM=0.209 tol=0.233
2023-02-21 03:13:49,499 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:50,384 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=71.2 pTM=0.215
2023-02-21 03:13:51,266 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=67.4 pTM=0.19 tol=0.923
2023-02-21 03:13:52,147 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=65.9 pTM=0.178 tol=0.181
2023-02-21 03:13:53,028 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=66.4 pTM=0.183 tol=0.252
2023-02-21 03:13:53,028 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:53,911 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=66.7 pTM=0.197
2023-02-21 03:13:54,791 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=67 pTM=0.211 tol=0.763
2023-02-21 03:13:55,669 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=66.8 pTM=0.212 tol=0.105
2023-02-21 03:13:56,549 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=66.2 pTM=0.212 tol=0.764
2023-02-21 03:13:56,549 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:13:57,434 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.8 pTM=0.201
2023-02-21 03:13:58,316 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=63.2 pTM=0.176 tol=0.618
2023-02-21 03:13:59,197 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=62.6 pTM=0.17 tol=0.51
2023-02-21 03:14:00,078 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=61.9 pTM=0.17 tol=0.283
2023-02-21 03:14:00,078 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:00,081 reranking models by 'plddt' metric
2023-02-21 03:14:00,082 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=67.1 pTM=0.215
2023-02-21 03:14:00,082 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=66.4 pTM=0.183
2023-02-21 03:14:00,082 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=66.2 pTM=0.212
2023-02-21 03:14:00,082 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=65.9 pTM=0.209
2023-02-21 03:14:00,082 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=61.9 pTM=0.17
2023-02-21 03:14:00,771 Query 48/80: 2kvx (length 28)
2023-02-21 03:14:01,396 Sleeping for 7s. Reason: PENDING
2023-02-21 03:14:10,269 Padding length to 36
2023-02-21 03:14:11,159 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.7 pTM=0.43
2023-02-21 03:14:12,039 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.456 tol=0.19
2023-02-21 03:14:12,917 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.4 pTM=0.466 tol=0.0771
2023-02-21 03:14:13,797 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.1 pTM=0.471 tol=0.0332
2023-02-21 03:14:13,797 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:14,683 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.4 pTM=0.446
2023-02-21 03:14:15,565 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.2 pTM=0.466 tol=0.146
2023-02-21 03:14:16,447 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.6 pTM=0.469 tol=0.0394
2023-02-21 03:14:17,330 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.1 pTM=0.474 tol=0.0249
2023-02-21 03:14:17,330 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:18,217 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.4 pTM=0.477
2023-02-21 03:14:19,099 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.9 pTM=0.49 tol=0.225
2023-02-21 03:14:19,981 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.2 pTM=0.491 tol=0.0721
2023-02-21 03:14:20,863 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.501 tol=0.0437
2023-02-21 03:14:20,863 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:21,747 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.2 pTM=0.448
2023-02-21 03:14:22,626 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.1 pTM=0.475 tol=0.177
2023-02-21 03:14:23,506 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.6 pTM=0.477 tol=0.0537
2023-02-21 03:14:24,386 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.8 pTM=0.493 tol=0.0336
2023-02-21 03:14:24,386 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:25,272 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.2 pTM=0.48
2023-02-21 03:14:26,154 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.8 pTM=0.499 tol=0.111
2023-02-21 03:14:27,036 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.1 pTM=0.499 tol=0.0464
2023-02-21 03:14:27,918 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.507 tol=0.0272
2023-02-21 03:14:27,918 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:27,921 reranking models by 'plddt' metric
2023-02-21 03:14:27,921 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.507
2023-02-21 03:14:27,921 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.501
2023-02-21 03:14:27,921 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.8 pTM=0.493
2023-02-21 03:14:27,922 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.1 pTM=0.474
2023-02-21 03:14:27,922 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=93.1 pTM=0.471
2023-02-21 03:14:28,745 Query 49/80: 7l53 (length 28)
2023-02-21 03:14:29,363 Sleeping for 10s. Reason: PENDING
2023-02-21 03:14:39,979 Sleeping for 9s. Reason: RUNNING
2023-02-21 03:14:50,851 Padding length to 36
2023-02-21 03:14:51,787 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.241
2023-02-21 03:14:52,666 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=66.6 pTM=0.21 tol=0.518
2023-02-21 03:14:53,545 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67 pTM=0.217 tol=0.464
2023-02-21 03:14:54,424 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.224 tol=0.293
2023-02-21 03:14:54,425 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:14:55,310 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.238
2023-02-21 03:14:56,193 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.22 tol=0.778
2023-02-21 03:14:57,074 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=64.3 pTM=0.211 tol=0.315
2023-02-21 03:14:57,956 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=64 pTM=0.21 tol=0.194
2023-02-21 03:14:57,956 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:14:58,842 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.9 pTM=0.222
2023-02-21 03:14:59,724 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.5 pTM=0.212 tol=0.425
2023-02-21 03:15:00,605 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.224 tol=0.751
2023-02-21 03:15:01,486 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.233 tol=0.73
2023-02-21 03:15:01,486 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:02,370 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.203
2023-02-21 03:15:03,249 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=65.5 pTM=0.2 tol=0.874
2023-02-21 03:15:04,127 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.208 tol=0.296
2023-02-21 03:15:05,007 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.226 tol=0.196
2023-02-21 03:15:05,007 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:05,892 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.244
2023-02-21 03:15:06,774 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.192 tol=0.676
2023-02-21 03:15:07,654 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.3 pTM=0.201 tol=0.243
2023-02-21 03:15:08,536 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.209 tol=0.215
2023-02-21 03:15:08,536 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:08,540 reranking models by 'plddt' metric
2023-02-21 03:15:08,540 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=71.4 pTM=0.233
2023-02-21 03:15:08,540 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=68.2 pTM=0.224
2023-02-21 03:15:08,540 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=68.1 pTM=0.226
2023-02-21 03:15:08,540 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=67.4 pTM=0.209
2023-02-21 03:15:08,540 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=64 pTM=0.21
2023-02-21 03:15:09,205 Query 50/80: 7l54 (length 28)
2023-02-21 03:15:11,201 Padding length to 36
2023-02-21 03:15:12,094 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.241
2023-02-21 03:15:12,974 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=66.6 pTM=0.21 tol=0.518
2023-02-21 03:15:13,852 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67 pTM=0.217 tol=0.464
2023-02-21 03:15:14,731 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.224 tol=0.293
2023-02-21 03:15:14,731 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:15,617 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.238
2023-02-21 03:15:16,499 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.22 tol=0.778
2023-02-21 03:15:17,380 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=64.3 pTM=0.211 tol=0.315
2023-02-21 03:15:18,262 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=64 pTM=0.21 tol=0.194
2023-02-21 03:15:18,262 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:19,147 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.9 pTM=0.222
2023-02-21 03:15:20,029 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.5 pTM=0.212 tol=0.425
2023-02-21 03:15:20,910 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.224 tol=0.751
2023-02-21 03:15:21,791 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.233 tol=0.73
2023-02-21 03:15:21,792 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:22,674 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.203
2023-02-21 03:15:23,559 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=65.5 pTM=0.2 tol=0.874
2023-02-21 03:15:24,443 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.208 tol=0.296
2023-02-21 03:15:25,329 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.226 tol=0.196
2023-02-21 03:15:25,329 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:26,220 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.244
2023-02-21 03:15:27,107 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.192 tol=0.676
2023-02-21 03:15:27,994 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.3 pTM=0.201 tol=0.243
2023-02-21 03:15:28,882 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.209 tol=0.215
2023-02-21 03:15:28,882 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:28,885 reranking models by 'plddt' metric
2023-02-21 03:15:28,885 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=71.4 pTM=0.233
2023-02-21 03:15:28,885 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=68.2 pTM=0.224
2023-02-21 03:15:28,885 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=68.1 pTM=0.226
2023-02-21 03:15:28,885 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=67.4 pTM=0.209
2023-02-21 03:15:28,885 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=64 pTM=0.21
2023-02-21 03:15:29,547 Query 51/80: 7l55 (length 28)
2023-02-21 03:15:31,389 Padding length to 36
2023-02-21 03:15:32,283 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.241
2023-02-21 03:15:33,162 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=66.6 pTM=0.21 tol=0.518
2023-02-21 03:15:34,041 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67 pTM=0.217 tol=0.464
2023-02-21 03:15:34,920 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.224 tol=0.293
2023-02-21 03:15:34,920 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:35,806 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.238
2023-02-21 03:15:36,688 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.22 tol=0.778
2023-02-21 03:15:37,575 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=64.3 pTM=0.211 tol=0.315
2023-02-21 03:15:38,463 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=64 pTM=0.21 tol=0.194
2023-02-21 03:15:38,463 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:39,354 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.9 pTM=0.222
2023-02-21 03:15:40,241 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.5 pTM=0.212 tol=0.425
2023-02-21 03:15:41,128 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.224 tol=0.751
2023-02-21 03:15:42,015 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.233 tol=0.73
2023-02-21 03:15:42,016 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:42,905 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.203
2023-02-21 03:15:43,790 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=65.5 pTM=0.2 tol=0.874
2023-02-21 03:15:44,675 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.208 tol=0.296
2023-02-21 03:15:45,560 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.226 tol=0.196
2023-02-21 03:15:45,560 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:46,450 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.244
2023-02-21 03:15:47,338 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.192 tol=0.676
2023-02-21 03:15:48,225 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.3 pTM=0.201 tol=0.243
2023-02-21 03:15:49,112 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.209 tol=0.215
2023-02-21 03:15:49,112 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:15:49,115 reranking models by 'plddt' metric
2023-02-21 03:15:49,115 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=71.4 pTM=0.233
2023-02-21 03:15:49,115 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=68.2 pTM=0.224
2023-02-21 03:15:49,116 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=68.1 pTM=0.226
2023-02-21 03:15:49,116 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=67.4 pTM=0.209
2023-02-21 03:15:49,116 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=64 pTM=0.21
2023-02-21 03:15:49,933 Query 52/80: 1znu (length 29)
2023-02-21 03:15:50,539 Sleeping for 8s. Reason: PENDING
2023-02-21 03:16:00,428 Padding length to 36
2023-02-21 03:16:01,320 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.6 pTM=0.437
2023-02-21 03:16:02,200 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.8 pTM=0.497 tol=0.309
2023-02-21 03:16:03,079 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.6 pTM=0.506 tol=0.171
2023-02-21 03:16:03,965 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.8 pTM=0.506 tol=0.0701
2023-02-21 03:16:03,965 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:04,856 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.1 pTM=0.45
2023-02-21 03:16:05,744 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.9 pTM=0.46 tol=0.53
2023-02-21 03:16:06,632 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.2 pTM=0.487 tol=0.399
2023-02-21 03:16:07,521 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.489 tol=0.0652
2023-02-21 03:16:07,521 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:16:08,413 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.4 pTM=0.49
2023-02-21 03:16:09,301 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.535 tol=0.422
2023-02-21 03:16:10,189 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.9 pTM=0.542 tol=0.13
2023-02-21 03:16:11,078 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.2 pTM=0.548 tol=0.0547
2023-02-21 03:16:11,078 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:16:11,967 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.1 pTM=0.431
2023-02-21 03:16:12,853 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.1 pTM=0.482 tol=0.926
2023-02-21 03:16:13,738 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.8 pTM=0.501 tol=0.166
2023-02-21 03:16:14,624 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.2 pTM=0.493 tol=0.0516
2023-02-21 03:16:14,624 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:15,515 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.1 pTM=0.511
2023-02-21 03:16:16,404 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.4 pTM=0.504 tol=0.221
2023-02-21 03:16:17,291 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.3 pTM=0.521 tol=0.063
2023-02-21 03:16:18,180 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.8 pTM=0.513 tol=0.0284
2023-02-21 03:16:18,180 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:16:18,183 reranking models by 'plddt' metric
2023-02-21 03:16:18,183 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=96.2 pTM=0.548
2023-02-21 03:16:18,183 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=94.8 pTM=0.513
2023-02-21 03:16:18,183 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=93.8 pTM=0.506
2023-02-21 03:16:18,183 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=93.2 pTM=0.493
2023-02-21 03:16:18,183 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.489
2023-02-21 03:16:18,862 Query 53/80: 2k7g (length 29)
2023-02-21 03:16:20,882 Padding length to 36
2023-02-21 03:16:21,787 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.2 pTM=0.456
2023-02-21 03:16:22,667 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.8 pTM=0.479 tol=0.151
2023-02-21 03:16:23,549 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.9 pTM=0.474 tol=0.0584
2023-02-21 03:16:24,432 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.8 pTM=0.475 tol=0.0237
2023-02-21 03:16:24,432 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:25,322 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.2 pTM=0.473
2023-02-21 03:16:26,207 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.1 pTM=0.486 tol=0.108
2023-02-21 03:16:27,092 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92 pTM=0.483 tol=0.0425
2023-02-21 03:16:27,978 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.5 pTM=0.476 tol=0.031
2023-02-21 03:16:27,978 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:28,866 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.523
2023-02-21 03:16:29,752 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.7 pTM=0.534 tol=0.111
2023-02-21 03:16:30,637 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.4 pTM=0.526 tol=0.0391
2023-02-21 03:16:31,522 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.8 pTM=0.532 tol=0.036
2023-02-21 03:16:31,522 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:32,408 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.6 pTM=0.479
2023-02-21 03:16:33,292 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.8 pTM=0.514 tol=0.122
2023-02-21 03:16:34,175 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.1 pTM=0.515 tol=0.0504
2023-02-21 03:16:35,058 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.2 pTM=0.518 tol=0.0228
2023-02-21 03:16:35,058 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:35,947 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.9 pTM=0.525
2023-02-21 03:16:36,832 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.1 pTM=0.539 tol=0.133
2023-02-21 03:16:37,717 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.6 pTM=0.546 tol=0.0413
2023-02-21 03:16:38,603 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.4 pTM=0.543 tol=0.0289
2023-02-21 03:16:38,603 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:16:38,606 reranking models by 'plddt' metric
2023-02-21 03:16:38,606 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.4 pTM=0.543
2023-02-21 03:16:38,606 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.8 pTM=0.532
2023-02-21 03:16:38,606 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.2 pTM=0.518
2023-02-21 03:16:38,606 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=91.8 pTM=0.475
2023-02-21 03:16:38,606 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.5 pTM=0.476
2023-02-21 03:16:39,273 Query 54/80: 2kch (length 29)
2023-02-21 03:16:39,897 Sleeping for 8s. Reason: PENDING
2023-02-21 03:16:48,505 Sleeping for 7s. Reason: RUNNING
2023-02-21 03:16:57,354 Padding length to 36
2023-02-21 03:16:58,264 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.1 pTM=0.413
2023-02-21 03:16:59,143 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.9 pTM=0.446 tol=0.56
2023-02-21 03:17:00,028 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.6 pTM=0.468 tol=0.698
2023-02-21 03:17:00,914 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.9 pTM=0.498 tol=0.0884
2023-02-21 03:17:00,914 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:17:01,806 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.1 pTM=0.472
2023-02-21 03:17:02,694 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.3 pTM=0.466 tol=0.279
2023-02-21 03:17:03,582 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.8 pTM=0.457 tol=0.364
2023-02-21 03:17:04,471 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.9 pTM=0.46 tol=0.107
2023-02-21 03:17:04,471 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:17:05,363 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.1 pTM=0.49
2023-02-21 03:17:06,251 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.7 pTM=0.492 tol=0.62
2023-02-21 03:17:07,199 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.5 pTM=0.516 tol=0.637
2023-02-21 03:17:08,088 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.538 tol=0.11
2023-02-21 03:17:08,089 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:17:08,978 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.8 pTM=0.455
2023-02-21 03:17:09,863 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88.3 pTM=0.468 tol=0.681
2023-02-21 03:17:10,748 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.5 pTM=0.479 tol=0.733
2023-02-21 03:17:11,634 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.7 pTM=0.499 tol=0.0856
2023-02-21 03:17:11,634 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:12,526 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.8 pTM=0.465
2023-02-21 03:17:13,414 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.6 pTM=0.51 tol=1.12
2023-02-21 03:17:14,302 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.8 pTM=0.514 tol=0.0789
2023-02-21 03:17:15,190 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.519 tol=0.0334
2023-02-21 03:17:15,190 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:17:15,194 reranking models by 'plddt' metric
2023-02-21 03:17:15,194 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.519
2023-02-21 03:17:15,194 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.538
2023-02-21 03:17:15,194 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.7 pTM=0.499
2023-02-21 03:17:15,194 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.9 pTM=0.498
2023-02-21 03:17:15,194 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=86.9 pTM=0.46
2023-02-21 03:17:16,018 Query 55/80: 2lam (length 29)
2023-02-21 03:17:17,913 Padding length to 36
2023-02-21 03:17:18,811 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.9 pTM=0.44
2023-02-21 03:17:19,692 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.2 pTM=0.449 tol=0.169
2023-02-21 03:17:20,574 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.7 pTM=0.443 tol=0.0645
2023-02-21 03:17:21,456 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.7 pTM=0.446 tol=0.028
2023-02-21 03:17:21,456 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:22,345 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.6 pTM=0.447
2023-02-21 03:17:23,231 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.4 pTM=0.446 tol=0.15
2023-02-21 03:17:24,116 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.8 pTM=0.448 tol=0.0502
2023-02-21 03:17:25,001 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.1 pTM=0.451 tol=0.0281
2023-02-21 03:17:25,001 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:25,890 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.483
2023-02-21 03:17:26,775 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.3 pTM=0.501 tol=0.15
2023-02-21 03:17:27,660 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.9 pTM=0.499 tol=0.0601
2023-02-21 03:17:28,545 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.2 pTM=0.506 tol=0.0315
2023-02-21 03:17:28,546 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:29,432 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.8 pTM=0.464
2023-02-21 03:17:30,315 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.8 pTM=0.484 tol=0.157
2023-02-21 03:17:31,197 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.1 pTM=0.472 tol=0.0613
2023-02-21 03:17:32,080 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.1 pTM=0.482 tol=0.0283
2023-02-21 03:17:32,080 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:32,969 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.5 pTM=0.512
2023-02-21 03:17:33,854 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.1 pTM=0.498 tol=0.162
2023-02-21 03:17:34,738 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.7 pTM=0.491 tol=0.0557
2023-02-21 03:17:35,623 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.2 pTM=0.499 tol=0.0244
2023-02-21 03:17:35,623 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:17:35,626 reranking models by 'plddt' metric
2023-02-21 03:17:35,627 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.2 pTM=0.499
2023-02-21 03:17:35,627 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.2 pTM=0.506
2023-02-21 03:17:35,627 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.1 pTM=0.482
2023-02-21 03:17:35,627 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.1 pTM=0.451
2023-02-21 03:17:35,627 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=89.7 pTM=0.446
2023-02-21 03:17:36,303 Query 56/80: 2lur (length 29)
2023-02-21 03:17:36,910 Sleeping for 6s. Reason: PENDING
2023-02-21 03:17:43,515 Sleeping for 8s. Reason: RUNNING
2023-02-21 03:17:53,355 Padding length to 36
2023-02-21 03:17:54,274 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.2 pTM=0.368
2023-02-21 03:17:55,155 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.9 pTM=0.433 tol=0.697
2023-02-21 03:17:56,040 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.4 pTM=0.449 tol=0.129
2023-02-21 03:17:56,925 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.8 pTM=0.454 tol=0.0577
2023-02-21 03:17:56,925 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:17:57,817 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.2 pTM=0.402
2023-02-21 03:17:58,706 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.9 pTM=0.455 tol=0.446
2023-02-21 03:17:59,593 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.2 pTM=0.457 tol=0.193
2023-02-21 03:18:00,482 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.8 pTM=0.464 tol=0.103
2023-02-21 03:18:00,482 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:01,373 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=85.3 pTM=0.431
2023-02-21 03:18:02,261 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.9 pTM=0.47 tol=0.641
2023-02-21 03:18:03,149 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.8 pTM=0.484 tol=0.129
2023-02-21 03:18:04,037 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.1 pTM=0.497 tol=0.124
2023-02-21 03:18:04,037 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:04,926 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.4 pTM=0.427
2023-02-21 03:18:05,812 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.3 pTM=0.468 tol=0.311
2023-02-21 03:18:06,697 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.9 pTM=0.473 tol=0.0944
2023-02-21 03:18:07,583 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.7 pTM=0.47 tol=0.0443
2023-02-21 03:18:07,583 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:18:08,475 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.1 pTM=0.476
2023-02-21 03:18:09,363 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.1 pTM=0.467 tol=0.247
2023-02-21 03:18:10,250 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.5 pTM=0.456 tol=0.0786
2023-02-21 03:18:11,138 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.4 pTM=0.456 tol=0.0399
2023-02-21 03:18:11,138 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:11,141 reranking models by 'plddt' metric
2023-02-21 03:18:11,141 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.1 pTM=0.497
2023-02-21 03:18:11,141 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.7 pTM=0.47
2023-02-21 03:18:11,141 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.4 pTM=0.456
2023-02-21 03:18:11,141 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.8 pTM=0.454
2023-02-21 03:18:11,141 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=88.8 pTM=0.464
2023-02-21 03:18:11,961 Query 57/80: 2m9o (length 29)
2023-02-21 03:18:13,858 Padding length to 36
2023-02-21 03:18:14,761 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.5 pTM=0.44
2023-02-21 03:18:15,646 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.9 pTM=0.462 tol=0.173
2023-02-21 03:18:16,531 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.2 pTM=0.465 tol=0.0619
2023-02-21 03:18:17,416 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92 pTM=0.472 tol=0.0271
2023-02-21 03:18:17,417 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:18,308 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.7 pTM=0.442
2023-02-21 03:18:19,197 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.4 pTM=0.461 tol=0.138
2023-02-21 03:18:20,084 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.6 pTM=0.458 tol=0.0427
2023-02-21 03:18:20,973 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.9 pTM=0.461 tol=0.0245
2023-02-21 03:18:20,973 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:21,865 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.4 pTM=0.501
2023-02-21 03:18:22,753 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.5 pTM=0.506 tol=0.141
2023-02-21 03:18:23,641 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.6 pTM=0.507 tol=0.0453
2023-02-21 03:18:24,529 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95 pTM=0.516 tol=0.0281
2023-02-21 03:18:24,530 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:25,419 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.8 pTM=0.478
2023-02-21 03:18:26,305 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94 pTM=0.496 tol=0.16
2023-02-21 03:18:27,190 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.4 pTM=0.503 tol=0.0465
2023-02-21 03:18:28,076 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.6 pTM=0.505 tol=0.0281
2023-02-21 03:18:28,076 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:18:28,968 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95 pTM=0.52
2023-02-21 03:18:29,856 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.2 pTM=0.516 tol=0.157
2023-02-21 03:18:30,744 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.6 pTM=0.521 tol=0.0545
2023-02-21 03:18:31,633 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.522 tol=0.0251
2023-02-21 03:18:31,633 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:31,636 reranking models by 'plddt' metric
2023-02-21 03:18:31,636 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.522
2023-02-21 03:18:31,636 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95 pTM=0.516
2023-02-21 03:18:31,636 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.6 pTM=0.505
2023-02-21 03:18:31,636 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92 pTM=0.472
2023-02-21 03:18:31,637 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=90.9 pTM=0.461
2023-02-21 03:18:32,313 Query 58/80: 2mw0 (length 29)
2023-02-21 03:18:32,923 Sleeping for 7s. Reason: PENDING
2023-02-21 03:18:40,526 Sleeping for 6s. Reason: RUNNING
2023-02-21 03:18:48,566 Padding length to 36
2023-02-21 03:18:49,491 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.4 pTM=0.343
2023-02-21 03:18:50,372 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.8 pTM=0.411 tol=1.09
2023-02-21 03:18:51,257 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.4 pTM=0.423 tol=0.268
2023-02-21 03:18:52,142 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.3 pTM=0.432 tol=0.0547
2023-02-21 03:18:52,142 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:53,034 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.8 pTM=0.374
2023-02-21 03:18:53,922 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.9 pTM=0.423 tol=0.683
2023-02-21 03:18:54,810 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.9 pTM=0.433 tol=0.113
2023-02-21 03:18:55,698 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.3 pTM=0.436 tol=0.0356
2023-02-21 03:18:55,698 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:18:56,589 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.6 pTM=0.466
2023-02-21 03:18:57,477 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94 pTM=0.493 tol=0.126
2023-02-21 03:18:58,365 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.6 pTM=0.495 tol=0.0647
2023-02-21 03:18:59,253 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.5 tol=0.0272
2023-02-21 03:18:59,254 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:00,143 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.6 pTM=0.41
2023-02-21 03:19:01,028 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.432 tol=0.197
2023-02-21 03:19:01,912 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.2 pTM=0.445 tol=0.235
2023-02-21 03:19:02,798 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.4 pTM=0.469 tol=0.198
2023-02-21 03:19:02,798 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:19:03,689 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.6 pTM=0.455
2023-02-21 03:19:04,577 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.6 pTM=0.475 tol=0.216
2023-02-21 03:19:05,465 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.4 pTM=0.485 tol=0.0564
2023-02-21 03:19:06,353 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.1 pTM=0.495 tol=0.0238
2023-02-21 03:19:06,353 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:06,356 reranking models by 'plddt' metric
2023-02-21 03:19:06,356 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.1 pTM=0.495
2023-02-21 03:19:06,356 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.5
2023-02-21 03:19:06,356 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.4 pTM=0.469
2023-02-21 03:19:06,357 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.3 pTM=0.436
2023-02-21 03:19:06,357 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.3 pTM=0.432
2023-02-21 03:19:07,025 Query 59/80: 7k7x (length 29)
2023-02-21 03:19:07,626 Sleeping for 9s. Reason: PENDING
2023-02-21 03:19:17,239 Sleeping for 9s. Reason: RUNNING
2023-02-21 03:19:28,089 Padding length to 36
2023-02-21 03:19:29,001 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.8 pTM=0.437
2023-02-21 03:19:29,882 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.5 pTM=0.491 tol=0.235
2023-02-21 03:19:30,767 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.8 pTM=0.492 tol=0.13
2023-02-21 03:19:31,652 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.1 pTM=0.479 tol=0.0522
2023-02-21 03:19:31,652 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:32,543 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.8 pTM=0.45
2023-02-21 03:19:33,432 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.9 pTM=0.491 tol=0.152
2023-02-21 03:19:34,320 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.1 pTM=0.488 tol=0.0397
2023-02-21 03:19:35,209 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.483 tol=0.0183
2023-02-21 03:19:35,209 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:36,101 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.8 pTM=0.486
2023-02-21 03:19:36,989 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95 pTM=0.524 tol=0.17
2023-02-21 03:19:37,876 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.9 pTM=0.541 tol=0.0475
2023-02-21 03:19:38,765 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.518 tol=0.0415
2023-02-21 03:19:38,765 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:39,654 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.7 pTM=0.462
2023-02-21 03:19:40,539 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.4 pTM=0.511 tol=0.211
2023-02-21 03:19:41,425 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.6 pTM=0.51 tol=0.0487
2023-02-21 03:19:42,310 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.1 pTM=0.501 tol=0.024
2023-02-21 03:19:42,310 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:19:43,202 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.6 pTM=0.5
2023-02-21 03:19:44,090 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.6 pTM=0.527 tol=0.129
2023-02-21 03:19:44,978 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96 pTM=0.534 tol=0.0412
2023-02-21 03:19:45,867 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.8 pTM=0.531 tol=0.0224
2023-02-21 03:19:45,867 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:19:45,870 reranking models by 'plddt' metric
2023-02-21 03:19:45,870 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.8 pTM=0.531
2023-02-21 03:19:45,870 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.518
2023-02-21 03:19:45,870 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.1 pTM=0.501
2023-02-21 03:19:45,870 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.1 pTM=0.479
2023-02-21 03:19:45,870 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.483
2023-02-21 03:19:46,684 Query 60/80: 7lhc (length 29)
2023-02-21 03:19:47,282 Sleeping for 7s. Reason: PENDING
2023-02-21 03:19:54,893 Sleeping for 9s. Reason: RUNNING
2023-02-21 03:20:05,769 Padding length to 36
2023-02-21 03:20:06,689 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.2 pTM=0.456
2023-02-21 03:20:07,569 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.1 pTM=0.483 tol=0.209
2023-02-21 03:20:08,454 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.2 pTM=0.482 tol=0.104
2023-02-21 03:20:09,340 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93 pTM=0.493 tol=0.0573
2023-02-21 03:20:09,340 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:10,236 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.5 pTM=0.46
2023-02-21 03:20:11,125 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.4 pTM=0.482 tol=0.121
2023-02-21 03:20:12,013 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.1 pTM=0.489 tol=0.0508
2023-02-21 03:20:12,901 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.1 pTM=0.492 tol=0.0197
2023-02-21 03:20:12,902 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:13,793 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.5 pTM=0.517
2023-02-21 03:20:14,682 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.5 pTM=0.534 tol=0.139
2023-02-21 03:20:15,570 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.6 pTM=0.534 tol=0.0431
2023-02-21 03:20:16,526 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.7 pTM=0.535 tol=0.0188
2023-02-21 03:20:16,526 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:17,417 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.3 pTM=0.483
2023-02-21 03:20:18,303 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.6 pTM=0.512 tol=0.193
2023-02-21 03:20:19,188 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.9 pTM=0.514 tol=0.0489
2023-02-21 03:20:20,074 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.1 pTM=0.52 tol=0.0315
2023-02-21 03:20:20,074 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:20:20,966 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.4 pTM=0.516
2023-02-21 03:20:21,854 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.1 pTM=0.518 tol=0.118
2023-02-21 03:20:22,742 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.7 pTM=0.527 tol=0.0469
2023-02-21 03:20:23,631 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.8 pTM=0.529 tol=0.0205
2023-02-21 03:20:23,631 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:23,634 reranking models by 'plddt' metric
2023-02-21 03:20:23,634 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.8 pTM=0.529
2023-02-21 03:20:23,634 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.7 pTM=0.535
2023-02-21 03:20:23,634 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.1 pTM=0.52
2023-02-21 03:20:23,634 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=93 pTM=0.493
2023-02-21 03:20:23,634 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92.1 pTM=0.492
2023-02-21 03:20:24,302 Query 61/80: 1bh4 (length 30)
2023-02-21 03:20:24,907 Sleeping for 6s. Reason: PENDING
2023-02-21 03:20:31,520 Sleeping for 6s. Reason: RUNNING
2023-02-21 03:20:39,372 Padding length to 36
2023-02-21 03:20:40,277 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.6 pTM=0.45
2023-02-21 03:20:41,158 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.1 pTM=0.462 tol=0.134
2023-02-21 03:20:42,042 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.2 pTM=0.465 tol=0.0393
2023-02-21 03:20:42,928 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.2 pTM=0.464 tol=0.0343
2023-02-21 03:20:42,928 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:43,820 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.1 pTM=0.456
2023-02-21 03:20:44,708 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.8 pTM=0.47 tol=0.101
2023-02-21 03:20:45,595 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.5 pTM=0.478 tol=0.0351
2023-02-21 03:20:46,484 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.479 tol=0.0218
2023-02-21 03:20:46,484 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:47,375 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.1 pTM=0.492
2023-02-21 03:20:48,263 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.6 pTM=0.491 tol=0.0991
2023-02-21 03:20:49,151 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.6 pTM=0.489 tol=0.0316
2023-02-21 03:20:50,039 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.9 pTM=0.478 tol=0.0257
2023-02-21 03:20:50,039 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:50,928 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.3 pTM=0.476
2023-02-21 03:20:51,813 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.8 pTM=0.483 tol=0.113
2023-02-21 03:20:52,698 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.2 pTM=0.482 tol=0.0371
2023-02-21 03:20:53,584 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.7 pTM=0.478 tol=0.0268
2023-02-21 03:20:53,584 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:20:54,475 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.2 pTM=0.441
2023-02-21 03:20:55,367 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.4 pTM=0.451 tol=0.104
2023-02-21 03:20:56,254 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.2 pTM=0.445 tol=0.0296
2023-02-21 03:20:57,142 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88.3 pTM=0.436 tol=0.0288
2023-02-21 03:20:57,142 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:20:57,145 reranking models by 'plddt' metric
2023-02-21 03:20:57,146 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.9 pTM=0.478
2023-02-21 03:20:57,146 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.479
2023-02-21 03:20:57,146 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.7 pTM=0.478
2023-02-21 03:20:57,146 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=90.2 pTM=0.464
2023-02-21 03:20:57,146 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=88.3 pTM=0.436
2023-02-21 03:20:57,986 Query 62/80: 1df6 (length 30)
2023-02-21 03:20:58,604 Sleeping for 7s. Reason: PENDING
2023-02-21 03:21:06,220 Sleeping for 9s. Reason: PENDING
2023-02-21 03:21:17,099 Padding length to 36
2023-02-21 03:21:18,009 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=61.6 pTM=0.213
2023-02-21 03:21:18,970 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=62.8 pTM=0.215 tol=1.3
2023-02-21 03:21:19,869 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=63.2 pTM=0.211 tol=0.585
2023-02-21 03:21:20,754 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=63.4 pTM=0.214 tol=0.411
2023-02-21 03:21:20,755 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 03:21:21,646 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=64.2 pTM=0.22
2023-02-21 03:21:22,534 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.222 tol=1.21
2023-02-21 03:21:23,421 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=62.3 pTM=0.219 tol=2.02
2023-02-21 03:21:24,309 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=60.3 pTM=0.202 tol=0.799
2023-02-21 03:21:24,309 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:21:25,205 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=74.1 pTM=0.283
2023-02-21 03:21:26,093 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.6 pTM=0.253 tol=0.701
2023-02-21 03:21:26,980 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=75.9 pTM=0.319 tol=0.892
2023-02-21 03:21:27,868 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.8 pTM=0.367 tol=0.408
2023-02-21 03:21:27,868 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:21:28,757 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.9 pTM=0.272
2023-02-21 03:21:29,642 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=66.7 pTM=0.225 tol=0.438
2023-02-21 03:21:30,527 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.1 pTM=0.219 tol=0.522
2023-02-21 03:21:31,412 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.234 tol=0.568
2023-02-21 03:21:31,412 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:21:32,360 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=64.2 pTM=0.251
2023-02-21 03:21:33,253 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=64.4 pTM=0.225 tol=0.553
2023-02-21 03:21:34,140 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.276 tol=0.92
2023-02-21 03:21:35,028 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=73.2 pTM=0.312 tol=0.378
2023-02-21 03:21:35,028 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:21:35,031 reranking models by 'plddt' metric
2023-02-21 03:21:35,032 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=80.8 pTM=0.367
2023-02-21 03:21:35,032 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=73.2 pTM=0.312
2023-02-21 03:21:35,032 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=67.8 pTM=0.234
2023-02-21 03:21:35,032 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=63.4 pTM=0.214
2023-02-21 03:21:35,032 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=60.3 pTM=0.202
2023-02-21 03:21:35,749 Query 63/80: 1vb8 (length 30)
2023-02-21 03:21:36,347 Sleeping for 10s. Reason: PENDING
2023-02-21 03:21:46,955 Sleeping for 7s. Reason: PENDING
2023-02-21 03:21:54,567 Sleeping for 10s. Reason: PENDING
2023-02-21 03:22:05,172 Sleeping for 5s. Reason: RUNNING
2023-02-21 03:22:12,197 Padding length to 36
2023-02-21 03:22:13,115 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=78.3 pTM=0.351
2023-02-21 03:22:13,995 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.9 pTM=0.418 tol=0.324
2023-02-21 03:22:14,873 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87.4 pTM=0.439 tol=0.0623
2023-02-21 03:22:15,753 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.2 pTM=0.444 tol=0.0452
2023-02-21 03:22:15,753 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:22:16,645 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.1 pTM=0.413
2023-02-21 03:22:17,533 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.9 pTM=0.43 tol=0.326
2023-02-21 03:22:18,420 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89 pTM=0.454 tol=0.0853
2023-02-21 03:22:19,308 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.8 pTM=0.436 tol=0.0274
2023-02-21 03:22:19,308 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:22:20,199 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.2 pTM=0.463
2023-02-21 03:22:21,087 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.2 pTM=0.475 tol=0.211
2023-02-21 03:22:21,975 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.5 pTM=0.487 tol=0.0568
2023-02-21 03:22:22,868 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.7 pTM=0.487 tol=0.0359
2023-02-21 03:22:22,869 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:22:23,766 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.4 pTM=0.458
2023-02-21 03:22:24,652 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90 pTM=0.463 tol=0.166
2023-02-21 03:22:25,537 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.3 pTM=0.478 tol=0.0677
2023-02-21 03:22:26,422 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.2 pTM=0.475 tol=0.03
2023-02-21 03:22:26,422 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:22:27,409 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.5 pTM=0.455
2023-02-21 03:22:28,297 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.1 pTM=0.444 tol=0.202
2023-02-21 03:22:29,184 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.2 pTM=0.46 tol=0.0553
2023-02-21 03:22:30,072 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.2 pTM=0.457 tol=0.0338
2023-02-21 03:22:30,072 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:22:30,075 reranking models by 'plddt' metric
2023-02-21 03:22:30,075 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.7 pTM=0.487
2023-02-21 03:22:30,076 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.2 pTM=0.475
2023-02-21 03:22:30,076 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.2 pTM=0.457
2023-02-21 03:22:30,076 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.2 pTM=0.444
2023-02-21 03:22:30,076 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.8 pTM=0.436
2023-02-21 03:22:30,746 Query 64/80: 2knm (length 30)
2023-02-21 03:22:31,334 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:22:40,945 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:22:51,553 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:22:58,426 Padding length to 36
2023-02-21 03:22:59,336 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.4 pTM=0.439
2023-02-21 03:23:00,216 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.8 pTM=0.45 tol=0.186
2023-02-21 03:23:01,096 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.4 pTM=0.445 tol=0.0427
2023-02-21 03:23:01,981 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.4 pTM=0.447 tol=0.019
2023-02-21 03:23:01,981 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:23:02,873 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.7 pTM=0.451
2023-02-21 03:23:03,761 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.2 pTM=0.45 tol=0.127
2023-02-21 03:23:04,648 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.9 pTM=0.457 tol=0.0329
2023-02-21 03:23:05,537 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.8 pTM=0.454 tol=0.0271
2023-02-21 03:23:05,537 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:23:06,428 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.8 pTM=0.487
2023-02-21 03:23:07,316 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.5 pTM=0.494 tol=0.0833
2023-02-21 03:23:08,203 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.5 pTM=0.492 tol=0.028
2023-02-21 03:23:09,091 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.2 pTM=0.489 tol=0.0202
2023-02-21 03:23:09,091 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:23:09,980 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.5 pTM=0.448
2023-02-21 03:23:10,868 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.46 tol=0.101
2023-02-21 03:23:11,753 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.6 pTM=0.465 tol=0.0297
2023-02-21 03:23:12,638 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.1 pTM=0.458 tol=0.033
2023-02-21 03:23:12,639 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:23:13,530 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.47
2023-02-21 03:23:14,418 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.4 pTM=0.474 tol=0.0737
2023-02-21 03:23:15,305 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.9 pTM=0.478 tol=0.0308
2023-02-21 03:23:16,193 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.474 tol=0.0273
2023-02-21 03:23:16,193 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:23:16,196 reranking models by 'plddt' metric
2023-02-21 03:23:16,196 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.2 pTM=0.489
2023-02-21 03:23:16,196 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.474
2023-02-21 03:23:16,196 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.1 pTM=0.458
2023-02-21 03:23:16,196 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=89.8 pTM=0.454
2023-02-21 03:23:16,196 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.4 pTM=0.447
2023-02-21 03:23:17,032 Query 65/80: 2kuk (length 30)
2023-02-21 03:23:17,628 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:23:28,226 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:23:36,820 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:23:45,424 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:23:52,036 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:23:58,637 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:24:08,255 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:24:18,872 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:24:29,488 Sleeping for 5s. Reason: PENDING
2023-02-21 03:24:35,100 Sleeping for 7s. Reason: RUNNING
2023-02-21 03:24:43,970 Padding length to 36
2023-02-21 03:24:44,887 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.4 pTM=0.468
2023-02-21 03:24:45,766 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.494 tol=0.212
2023-02-21 03:24:46,645 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.9 pTM=0.497 tol=0.0549
2023-02-21 03:24:47,525 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.9 pTM=0.516 tol=0.0388
2023-02-21 03:24:47,525 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:24:48,411 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.2 pTM=0.451
2023-02-21 03:24:49,294 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.9 pTM=0.458 tol=0.211
2023-02-21 03:24:50,181 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.8 pTM=0.457 tol=0.0765
2023-02-21 03:24:51,069 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.6 pTM=0.466 tol=0.714
2023-02-21 03:24:51,069 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:24:51,962 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90 pTM=0.506
2023-02-21 03:24:52,851 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.2 pTM=0.534 tol=0.343
2023-02-21 03:24:53,739 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.5 pTM=0.54 tol=0.106
2023-02-21 03:24:54,627 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.546 tol=0.0433
2023-02-21 03:24:54,627 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:24:55,516 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.9 pTM=0.449
2023-02-21 03:24:56,402 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.1 pTM=0.473 tol=0.974
2023-02-21 03:24:57,287 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.5 pTM=0.5 tol=0.132
2023-02-21 03:24:58,172 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.9 pTM=0.519 tol=0.0542
2023-02-21 03:24:58,172 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:24:59,063 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.7 pTM=0.496
2023-02-21 03:24:59,951 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.3 pTM=0.514 tol=0.346
2023-02-21 03:25:00,839 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.1 pTM=0.522 tol=0.0547
2023-02-21 03:25:01,727 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.2 pTM=0.535 tol=0.0421
2023-02-21 03:25:01,727 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:25:01,730 reranking models by 'plddt' metric
2023-02-21 03:25:01,730 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.546
2023-02-21 03:25:01,730 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=94.2 pTM=0.535
2023-02-21 03:25:01,731 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.9 pTM=0.519
2023-02-21 03:25:01,731 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.9 pTM=0.516
2023-02-21 03:25:01,731 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=86.6 pTM=0.466
2023-02-21 03:25:02,416 Query 66/80: 2kux (length 30)
2023-02-21 03:25:03,010 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:25:12,626 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:25:20,231 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:25:29,826 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:25:39,424 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:25:45,021 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:25:52,626 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:26:03,512 Padding length to 36
2023-02-21 03:26:04,426 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.2 pTM=0.454
2023-02-21 03:26:05,305 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.1 pTM=0.469 tol=0.156
2023-02-21 03:26:06,184 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90 pTM=0.465 tol=0.0455
2023-02-21 03:26:07,069 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.4 pTM=0.467 tol=0.0247
2023-02-21 03:26:07,069 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:26:07,960 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.1 pTM=0.475
2023-02-21 03:26:08,849 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.2 pTM=0.475 tol=0.0945
2023-02-21 03:26:09,736 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.8 pTM=0.467 tol=0.0301
2023-02-21 03:26:10,624 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.3 pTM=0.473 tol=0.0237
2023-02-21 03:26:10,624 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 03:26:11,515 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.6 pTM=0.484
2023-02-21 03:26:12,403 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.5 pTM=0.492 tol=0.104
2023-02-21 03:26:13,291 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.6 pTM=0.492 tol=0.0465
2023-02-21 03:26:14,178 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.49 tol=0.0238
2023-02-21 03:26:14,178 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 03:26:15,067 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.4 pTM=0.452
2023-02-21 03:26:15,952 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.6 pTM=0.467 tol=0.115
2023-02-21 03:26:16,836 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.3 pTM=0.461 tol=0.0476
2023-02-21 03:26:17,722 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.8 pTM=0.468 tol=0.0343
2023-02-21 03:26:17,722 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:26:18,613 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.3 pTM=0.487
2023-02-21 03:26:19,501 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.6 pTM=0.487 tol=0.068
2023-02-21 03:26:20,388 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.6 pTM=0.483 tol=0.0392
2023-02-21 03:26:21,276 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.3 pTM=0.492 tol=0.0249
2023-02-21 03:26:21,276 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 03:26:21,279 reranking models by 'plddt' metric
2023-02-21 03:26:21,279 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.3 pTM=0.492
2023-02-21 03:26:21,279 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.49
2023-02-21 03:26:21,279 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=91.3 pTM=0.473
2023-02-21 03:26:21,279 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=90.8 pTM=0.468
2023-02-21 03:26:21,279 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.4 pTM=0.467
2023-02-21 03:26:22,127 Query 67/80: 2mn1 (length 30)
2023-02-21 03:26:22,828 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:26:30,432 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:26:40,044 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:26:49,647 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:27:00,245 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:27:08,864 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:27:15,458 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:27:23,066 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:27:33,923 Padding length to 36
2023-02-21 03:27:34,848 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.4 pTM=0.472
2023-02-21 03:27:35,728 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89 pTM=0.47 tol=0.244
2023-02-21 03:27:36,606 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.2 pTM=0.472 tol=0.0524
2023-02-21 03:27:37,489 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.2 pTM=0.462 tol=0.0457
2023-02-21 03:27:37,489 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:27:38,378 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.1 pTM=0.497
2023-02-21 03:27:39,264 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.5 pTM=0.501 tol=0.142
2023-02-21 03:27:40,150 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.8 pTM=0.506 tol=0.0574
2023-02-21 03:27:41,036 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.9 pTM=0.491 tol=0.0406
2023-02-21 03:27:41,036 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:27:41,925 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.1 pTM=0.527
2023-02-21 03:27:42,811 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.7 pTM=0.528 tol=0.22
2023-02-21 03:27:43,696 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.526 tol=0.0659
2023-02-21 03:27:44,582 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.9 pTM=0.524 tol=0.0362
2023-02-21 03:27:44,582 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:27:45,469 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.8 pTM=0.511
2023-02-21 03:27:46,352 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.8 pTM=0.528 tol=0.214
2023-02-21 03:27:47,234 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.6 pTM=0.524 tol=0.0581
2023-02-21 03:27:48,118 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.8 pTM=0.525 tol=0.0461
2023-02-21 03:27:48,118 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:27:49,006 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.8 pTM=0.524
2023-02-21 03:27:49,892 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.6 pTM=0.533 tol=0.143
2023-02-21 03:27:50,777 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.6 pTM=0.528 tol=0.0393
2023-02-21 03:27:51,663 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.9 pTM=0.536 tol=0.0452
2023-02-21 03:27:51,663 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:27:51,666 reranking models by 'plddt' metric
2023-02-21 03:27:51,666 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.9 pTM=0.536
2023-02-21 03:27:51,666 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=93.8 pTM=0.525
2023-02-21 03:27:51,666 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=92.9 pTM=0.524
2023-02-21 03:27:51,666 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=89.9 pTM=0.491
2023-02-21 03:27:51,666 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.2 pTM=0.462
2023-02-21 03:27:52,341 Query 68/80: 2mso (length 30)
2023-02-21 03:27:52,948 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:28:01,571 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:28:12,180 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:28:21,779 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:28:32,410 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:28:39,026 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:28:48,631 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:28:54,240 Sleeping for 10s. Reason: PENDING
2023-02-21 03:29:06,259 Padding length to 36
2023-02-21 03:29:07,176 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.26
2023-02-21 03:29:08,055 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=61.5 pTM=0.218 tol=0.966
2023-02-21 03:29:08,934 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.257 tol=0.68
2023-02-21 03:29:09,813 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.23 tol=0.548
2023-02-21 03:29:09,813 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:29:10,699 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.297
2023-02-21 03:29:11,580 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=62.3 pTM=0.239 tol=0.867
2023-02-21 03:29:12,462 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=61.2 pTM=0.239 tol=0.494
2023-02-21 03:29:13,344 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=62.6 pTM=0.252 tol=0.606
2023-02-21 03:29:13,344 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:29:14,229 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.1 pTM=0.307
2023-02-21 03:29:15,111 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=78 pTM=0.33 tol=0.771
2023-02-21 03:29:15,992 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.6 pTM=0.346 tol=0.499
2023-02-21 03:29:16,874 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81 pTM=0.353 tol=0.0864
2023-02-21 03:29:16,874 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:29:17,757 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=76.4 pTM=0.323
2023-02-21 03:29:18,637 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=77.8 pTM=0.338 tol=0.746
2023-02-21 03:29:19,516 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=78.8 pTM=0.355 tol=0.108
2023-02-21 03:29:20,395 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=78.3 pTM=0.353 tol=0.0879
2023-02-21 03:29:20,395 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:29:21,280 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65 pTM=0.234
2023-02-21 03:29:22,162 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=71.5 pTM=0.281 tol=0.954
2023-02-21 03:29:23,044 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=78.1 pTM=0.334 tol=0.622
2023-02-21 03:29:23,926 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.4 pTM=0.359 tol=0.171
2023-02-21 03:29:23,926 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:29:23,929 reranking models by 'plddt' metric
2023-02-21 03:29:23,929 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=81 pTM=0.353
2023-02-21 03:29:23,929 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=80.4 pTM=0.359
2023-02-21 03:29:23,930 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=78.3 pTM=0.353
2023-02-21 03:29:23,930 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=63.5 pTM=0.23
2023-02-21 03:29:23,930 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=62.6 pTM=0.252
2023-02-21 03:29:24,600 Query 69/80: 7rn3 (length 30)
2023-02-21 03:29:25,212 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:29:34,831 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:29:44,448 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:29:51,062 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:29:57,669 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:30:08,283 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:30:18,901 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:30:28,514 Sleeping for 9s. Reason: PENDING
2023-02-21 03:30:39,357 Padding length to 36
2023-02-21 03:30:40,276 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.8 pTM=0.455
2023-02-21 03:30:41,156 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.8 pTM=0.461 tol=0.139
2023-02-21 03:30:42,034 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.6 pTM=0.461 tol=0.0536
2023-02-21 03:30:42,913 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.8 pTM=0.461 tol=0.0285
2023-02-21 03:30:42,914 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:30:43,799 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.9 pTM=0.458
2023-02-21 03:30:44,682 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.4 pTM=0.453 tol=0.114
2023-02-21 03:30:45,564 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.6 pTM=0.451 tol=0.0433
2023-02-21 03:30:46,446 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.8 pTM=0.455 tol=0.0233
2023-02-21 03:30:46,446 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:30:47,332 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.2 pTM=0.479
2023-02-21 03:30:48,214 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.9 pTM=0.483 tol=0.0915
2023-02-21 03:30:49,095 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.2 pTM=0.487 tol=0.042
2023-02-21 03:30:49,977 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.9 pTM=0.494 tol=0.0309
2023-02-21 03:30:49,977 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:30:50,860 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.2 pTM=0.447
2023-02-21 03:30:51,740 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.461 tol=0.114
2023-02-21 03:30:52,620 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.2 pTM=0.46 tol=0.035
2023-02-21 03:30:53,499 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.8 pTM=0.467 tol=0.0247
2023-02-21 03:30:53,499 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:30:54,384 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.1 pTM=0.463
2023-02-21 03:30:55,266 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.7 pTM=0.465 tol=0.0922
2023-02-21 03:30:56,148 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.5 pTM=0.473 tol=0.0346
2023-02-21 03:30:57,030 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.468 tol=0.0255
2023-02-21 03:30:57,030 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:30:57,033 reranking models by 'plddt' metric
2023-02-21 03:30:57,033 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.9 pTM=0.494
2023-02-21 03:30:57,033 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.468
2023-02-21 03:30:57,033 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.8 pTM=0.467
2023-02-21 03:30:57,033 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=89.8 pTM=0.455
2023-02-21 03:30:57,033 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=89.8 pTM=0.461
2023-02-21 03:30:57,853 Query 70/80: 1za8 (length 31)
2023-02-21 03:30:58,452 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:31:04,073 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:31:12,692 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:31:18,294 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:31:25,894 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:31:32,508 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:31:39,123 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:31:44,749 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:31:54,377 Sleeping for 6s. Reason: PENDING
2023-02-21 03:32:02,246 Padding length to 36
2023-02-21 03:32:03,155 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.6 pTM=0.435
2023-02-21 03:32:04,031 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.6 pTM=0.456 tol=0.226
2023-02-21 03:32:04,910 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.8 pTM=0.455 tol=0.199
2023-02-21 03:32:05,789 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.1 pTM=0.449 tol=0.134
2023-02-21 03:32:05,789 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:32:06,675 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.1 pTM=0.45
2023-02-21 03:32:07,557 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.9 pTM=0.464 tol=0.373
2023-02-21 03:32:08,438 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.2 pTM=0.459 tol=0.123
2023-02-21 03:32:09,321 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.9 pTM=0.458 tol=0.0693
2023-02-21 03:32:09,321 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:32:10,206 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.9 pTM=0.488
2023-02-21 03:32:11,088 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.3 pTM=0.484 tol=0.271
2023-02-21 03:32:11,970 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.7 pTM=0.487 tol=0.11
2023-02-21 03:32:12,852 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.3 pTM=0.489 tol=0.066
2023-02-21 03:32:12,852 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:32:13,735 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.8 pTM=0.489
2023-02-21 03:32:14,615 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89 pTM=0.479 tol=0.258
2023-02-21 03:32:15,493 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.1 pTM=0.485 tol=0.0732
2023-02-21 03:32:16,373 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.1 pTM=0.485 tol=0.0778
2023-02-21 03:32:16,373 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:32:17,258 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.1 pTM=0.484
2023-02-21 03:32:18,139 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.5 pTM=0.483 tol=0.239
2023-02-21 03:32:19,021 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.1 pTM=0.495 tol=0.13
2023-02-21 03:32:19,903 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91 pTM=0.494 tol=0.0507
2023-02-21 03:32:19,903 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:32:19,906 reranking models by 'plddt' metric
2023-02-21 03:32:19,906 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.3 pTM=0.489
2023-02-21 03:32:19,906 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91 pTM=0.494
2023-02-21 03:32:19,906 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.1 pTM=0.485
2023-02-21 03:32:19,906 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.9 pTM=0.458
2023-02-21 03:32:19,907 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.1 pTM=0.449
2023-02-21 03:32:20,573 Query 71/80: 2b38 (length 31)
2023-02-21 03:32:21,170 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:32:27,777 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:32:38,399 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:32:46,007 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:32:55,615 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:33:01,223 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:33:08,827 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:33:16,453 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:33:22,046 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:33:31,661 Sleeping for 10s. Reason: PENDING
2023-02-21 03:33:43,521 Padding length to 36
2023-02-21 03:33:44,445 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.4 pTM=0.424
2023-02-21 03:33:45,321 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=83.5 pTM=0.461 tol=0.591
2023-02-21 03:33:46,200 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.6 pTM=0.481 tol=0.492
2023-02-21 03:33:47,079 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=85 pTM=0.473 tol=0.137
2023-02-21 03:33:47,079 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 03:33:47,965 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.8 pTM=0.474
2023-02-21 03:33:48,848 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.6 pTM=0.546 tol=0.647
2023-02-21 03:33:49,729 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.7 pTM=0.542 tol=0.0789
2023-02-21 03:33:50,611 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93 pTM=0.546 tol=0.0366
2023-02-21 03:33:50,611 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:33:51,497 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=85.2 pTM=0.488
2023-02-21 03:33:52,378 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.7 pTM=0.546 tol=1.13
2023-02-21 03:33:53,259 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.8 pTM=0.552 tol=0.109
2023-02-21 03:33:54,141 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94 pTM=0.552 tol=0.0337
2023-02-21 03:33:54,141 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:33:55,024 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.8 pTM=0.481
2023-02-21 03:33:55,903 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.4 pTM=0.486 tol=0.222
2023-02-21 03:33:56,782 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.9 pTM=0.472 tol=0.0709
2023-02-21 03:33:57,661 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.4 pTM=0.479 tol=0.0588
2023-02-21 03:33:57,661 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:33:58,547 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.8 pTM=0.495
2023-02-21 03:33:59,428 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.4 pTM=0.499 tol=0.534
2023-02-21 03:34:00,309 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.8 pTM=0.494 tol=0.137
2023-02-21 03:34:01,191 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87.1 pTM=0.496 tol=0.0475
2023-02-21 03:34:01,191 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:34:01,194 reranking models by 'plddt' metric
2023-02-21 03:34:01,194 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=94 pTM=0.552
2023-02-21 03:34:01,194 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=93 pTM=0.546
2023-02-21 03:34:01,194 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=87.1 pTM=0.496
2023-02-21 03:34:01,194 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=86.4 pTM=0.479
2023-02-21 03:34:01,194 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=85 pTM=0.473
2023-02-21 03:34:02,026 Query 72/80: 2eri (length 31)
2023-02-21 03:34:02,632 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:34:12,240 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:34:21,858 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:34:32,466 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:34:39,070 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:34:44,685 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:34:53,291 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:34:59,917 Sleeping for 5s. Reason: PENDING
2023-02-21 03:35:05,520 Sleeping for 10s. Reason: RUNNING
2023-02-21 03:35:17,385 Padding length to 36
2023-02-21 03:35:18,293 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.2 pTM=0.467
2023-02-21 03:35:19,171 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88 pTM=0.46 tol=0.124
2023-02-21 03:35:20,049 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.1 pTM=0.455 tol=0.049
2023-02-21 03:35:20,928 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.5 pTM=0.466 tol=0.0305
2023-02-21 03:35:20,928 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:35:21,813 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.4 pTM=0.503
2023-02-21 03:35:22,695 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.4 pTM=0.487 tol=0.111
2023-02-21 03:35:23,576 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.8 pTM=0.49 tol=0.0323
2023-02-21 03:35:24,457 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91 pTM=0.493 tol=0.0231
2023-02-21 03:35:24,457 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:35:25,347 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.6 pTM=0.504
2023-02-21 03:35:26,229 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.6 pTM=0.497 tol=0.105
2023-02-21 03:35:27,110 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.2 pTM=0.492 tol=0.037
2023-02-21 03:35:27,991 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.1 pTM=0.503 tol=0.0311
2023-02-21 03:35:27,991 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:35:28,874 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.8 pTM=0.489
2023-02-21 03:35:29,753 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.4 pTM=0.486 tol=0.102
2023-02-21 03:35:30,631 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.9 pTM=0.487 tol=0.0306
2023-02-21 03:35:31,510 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.4 pTM=0.498 tol=0.0297
2023-02-21 03:35:31,510 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:35:32,395 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.8 pTM=0.479
2023-02-21 03:35:33,279 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.6 pTM=0.478 tol=0.0738
2023-02-21 03:35:34,161 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.6 pTM=0.475 tol=0.0275
2023-02-21 03:35:35,042 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.7 pTM=0.488 tol=0.031
2023-02-21 03:35:35,042 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:35:35,046 reranking models by 'plddt' metric
2023-02-21 03:35:35,046 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.1 pTM=0.503
2023-02-21 03:35:35,046 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.4 pTM=0.498
2023-02-21 03:35:35,046 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=91 pTM=0.493
2023-02-21 03:35:35,046 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=90.7 pTM=0.488
2023-02-21 03:35:35,046 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.5 pTM=0.466
2023-02-21 03:35:35,715 Query 73/80: 2gj0 (length 31)
2023-02-21 03:35:36,335 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:35:41,943 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:35:50,560 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:35:58,163 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:36:04,763 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:36:13,371 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:36:18,980 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:36:27,606 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:36:38,212 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:36:43,825 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:36:50,432 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:36:57,042 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:37:07,647 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:37:17,255 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:37:26,876 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:37:33,499 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:37:41,111 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:37:48,732 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:37:59,746 Padding length to 36
2023-02-21 03:38:00,652 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.418
2023-02-21 03:38:01,527 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=78.8 pTM=0.399 tol=0.694
2023-02-21 03:38:02,405 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=81.2 pTM=0.419 tol=0.162
2023-02-21 03:38:03,284 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.4 pTM=0.429 tol=0.0701
2023-02-21 03:38:03,284 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:38:04,173 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=79.4 pTM=0.413
2023-02-21 03:38:05,055 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.6 pTM=0.413 tol=0.376
2023-02-21 03:38:05,936 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=80.4 pTM=0.421 tol=0.139
2023-02-21 03:38:06,817 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=80.9 pTM=0.421 tol=0.105
2023-02-21 03:38:06,817 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:38:07,702 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=86.8 pTM=0.479
2023-02-21 03:38:08,585 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.9 pTM=0.482 tol=0.248
2023-02-21 03:38:09,466 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.2 pTM=0.484 tol=0.0761
2023-02-21 03:38:10,348 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=87.1 pTM=0.479 tol=0.057
2023-02-21 03:38:10,348 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:38:11,230 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.9 pTM=0.452
2023-02-21 03:38:12,110 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.9 pTM=0.478 tol=0.649
2023-02-21 03:38:12,988 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.1 pTM=0.471 tol=0.118
2023-02-21 03:38:13,867 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.8 pTM=0.48 tol=0.0588
2023-02-21 03:38:13,867 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:38:14,752 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.1 pTM=0.471
2023-02-21 03:38:15,633 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.7 pTM=0.485 tol=0.108
2023-02-21 03:38:16,514 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.1 pTM=0.49 tol=0.0333
2023-02-21 03:38:17,396 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88 pTM=0.483 tol=0.0354
2023-02-21 03:38:17,397 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:38:17,400 reranking models by 'plddt' metric
2023-02-21 03:38:17,400 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=88 pTM=0.483
2023-02-21 03:38:17,400 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=87.1 pTM=0.479
2023-02-21 03:38:17,400 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.8 pTM=0.48
2023-02-21 03:38:17,400 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=82.4 pTM=0.429
2023-02-21 03:38:17,400 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=80.9 pTM=0.421
2023-02-21 03:38:18,073 Query 74/80: 7s55 (length 31)
2023-02-21 03:38:18,671 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:38:29,273 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:38:38,876 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:38:44,475 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:38:50,098 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:38:55,720 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:39:01,335 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:39:07,947 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:39:14,553 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 03:39:20,157 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:39:28,011 Padding length to 36
2023-02-21 03:39:28,926 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88 pTM=0.463
2023-02-21 03:39:29,802 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.8 pTM=0.464 tol=0.127
2023-02-21 03:39:30,678 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.8 pTM=0.47 tol=0.0656
2023-02-21 03:39:31,554 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.6 pTM=0.466 tol=0.0419
2023-02-21 03:39:31,554 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:39:32,436 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89 pTM=0.474
2023-02-21 03:39:33,315 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.3 pTM=0.469 tol=0.117
2023-02-21 03:39:34,193 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.2 pTM=0.471 tol=0.0392
2023-02-21 03:39:35,072 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.6 pTM=0.461 tol=0.026
2023-02-21 03:39:35,072 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:39:35,954 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.3 pTM=0.503
2023-02-21 03:39:36,833 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.3 pTM=0.514 tol=0.112
2023-02-21 03:39:37,711 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.6 pTM=0.517 tol=0.0508
2023-02-21 03:39:38,590 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.2 pTM=0.525 tol=0.0261
2023-02-21 03:39:38,590 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:39:39,469 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.3 pTM=0.475
2023-02-21 03:39:40,346 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.5 pTM=0.492 tol=0.153
2023-02-21 03:39:41,221 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.6 pTM=0.502 tol=0.0405
2023-02-21 03:39:42,097 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.1 pTM=0.506 tol=0.0214
2023-02-21 03:39:42,097 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:39:42,979 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.4 pTM=0.507
2023-02-21 03:39:43,858 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.4 pTM=0.516 tol=0.101
2023-02-21 03:39:44,736 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93 pTM=0.52 tol=0.0402
2023-02-21 03:39:45,615 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.9 pTM=0.52 tol=0.0261
2023-02-21 03:39:45,615 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:39:45,618 reranking models by 'plddt' metric
2023-02-21 03:39:45,618 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.2 pTM=0.525
2023-02-21 03:39:45,618 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=92.9 pTM=0.52
2023-02-21 03:39:45,618 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=92.1 pTM=0.506
2023-02-21 03:39:45,618 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.6 pTM=0.466
2023-02-21 03:39:45,618 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.6 pTM=0.461
2023-02-21 03:39:46,450 Query 75/80: 2mh1 (length 33)
2023-02-21 03:39:47,045 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 03:39:55,653 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:40:02,289 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 03:40:08,903 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:40:18,515 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 03:40:28,122 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 03:40:38,719 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:40:46,316 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 03:40:53,937 Sleeping for 5s. Reason: PENDING
2023-02-21 03:40:59,538 Sleeping for 5s. Reason: PENDING
2023-02-21 03:41:05,142 Sleeping for 5s. Reason: PENDING
2023-02-21 03:41:10,757 Sleeping for 7s. Reason: PENDING
2023-02-21 03:41:18,372 Sleeping for 6s. Reason: PENDING
2023-02-21 03:41:24,979 Sleeping for 6s. Reason: PENDING
2023-02-21 03:41:31,579 Sleeping for 7s. Reason: PENDING
2023-02-21 03:41:39,197 Sleeping for 10s. Reason: PENDING
2023-02-21 03:41:49,802 Sleeping for 6s. Reason: PENDING
2023-02-21 03:41:56,411 Sleeping for 10s. Reason: PENDING
2023-02-21 03:42:07,014 Sleeping for 6s. Reason: PENDING
2023-02-21 03:42:13,608 Sleeping for 5s. Reason: PENDING
2023-02-21 03:42:19,208 Sleeping for 9s. Reason: PENDING
2023-02-21 03:42:28,819 Sleeping for 9s. Reason: PENDING
2023-02-21 03:42:38,425 Sleeping for 9s. Reason: PENDING
2023-02-21 03:42:48,046 Sleeping for 5s. Reason: PENDING
2023-02-21 03:42:53,703 Sleeping for 5s. Reason: PENDING
2023-02-21 03:42:59,322 Sleeping for 5s. Reason: PENDING
2023-02-21 03:43:04,928 Sleeping for 7s. Reason: PENDING
2023-02-21 03:43:12,550 Sleeping for 9s. Reason: PENDING
2023-02-21 03:43:22,175 Sleeping for 10s. Reason: PENDING
2023-02-21 03:43:32,783 Sleeping for 5s. Reason: PENDING
2023-02-21 03:43:38,396 Sleeping for 5s. Reason: PENDING
2023-02-21 03:43:44,004 Sleeping for 10s. Reason: PENDING
2023-02-21 03:43:54,604 Sleeping for 7s. Reason: PENDING
2023-02-21 03:44:02,222 Sleeping for 8s. Reason: PENDING
2023-02-21 03:44:10,839 Sleeping for 6s. Reason: PENDING
2023-02-21 03:44:17,456 Sleeping for 6s. Reason: PENDING
2023-02-21 03:44:24,051 Sleeping for 5s. Reason: PENDING
2023-02-21 03:44:29,652 Sleeping for 9s. Reason: PENDING
2023-02-21 03:44:39,260 Sleeping for 7s. Reason: PENDING
2023-02-21 03:44:46,868 Sleeping for 6s. Reason: PENDING
2023-02-21 03:44:53,476 Sleeping for 9s. Reason: PENDING
2023-02-21 03:45:03,080 Sleeping for 10s. Reason: PENDING
2023-02-21 03:45:13,697 Sleeping for 10s. Reason: PENDING
2023-02-21 03:45:24,304 Sleeping for 5s. Reason: PENDING
2023-02-21 03:45:29,916 Sleeping for 7s. Reason: PENDING
2023-02-21 03:45:37,524 Sleeping for 5s. Reason: PENDING
2023-02-21 03:45:43,135 Sleeping for 6s. Reason: PENDING
2023-02-21 03:45:49,749 Sleeping for 10s. Reason: PENDING
2023-02-21 03:46:00,354 Sleeping for 9s. Reason: PENDING
2023-02-21 03:46:09,985 Sleeping for 8s. Reason: PENDING
2023-02-21 03:46:18,600 Sleeping for 7s. Reason: PENDING
2023-02-21 03:46:26,206 Sleeping for 5s. Reason: PENDING
2023-02-21 03:46:31,802 Sleeping for 8s. Reason: PENDING
2023-02-21 03:46:40,451 Sleeping for 7s. Reason: PENDING
2023-02-21 03:46:48,055 Sleeping for 7s. Reason: PENDING
2023-02-21 03:46:55,665 Sleeping for 6s. Reason: PENDING
2023-02-21 03:47:02,273 Sleeping for 10s. Reason: PENDING
2023-02-21 03:47:12,883 Sleeping for 6s. Reason: PENDING
2023-02-21 03:47:19,505 Sleeping for 9s. Reason: PENDING
2023-02-21 03:47:29,124 Sleeping for 5s. Reason: PENDING
2023-02-21 03:47:34,722 Sleeping for 9s. Reason: PENDING
2023-02-21 03:47:44,325 Sleeping for 9s. Reason: PENDING
2023-02-21 03:47:53,957 Sleeping for 7s. Reason: PENDING
2023-02-21 03:48:01,571 Sleeping for 9s. Reason: PENDING
2023-02-21 03:48:11,179 Sleeping for 8s. Reason: PENDING
2023-02-21 03:48:19,803 Sleeping for 8s. Reason: PENDING
2023-02-21 03:48:28,412 Sleeping for 7s. Reason: PENDING
2023-02-21 03:48:36,029 Sleeping for 10s. Reason: PENDING
2023-02-21 03:48:46,638 Sleeping for 5s. Reason: PENDING
2023-02-21 03:48:52,247 Sleeping for 7s. Reason: PENDING
2023-02-21 03:48:59,866 Sleeping for 7s. Reason: PENDING
2023-02-21 03:49:07,464 Sleeping for 7s. Reason: PENDING
2023-02-21 03:49:15,066 Sleeping for 6s. Reason: PENDING
2023-02-21 03:49:21,667 Sleeping for 8s. Reason: PENDING
2023-02-21 03:49:30,284 Sleeping for 7s. Reason: PENDING
2023-02-21 03:49:37,887 Sleeping for 8s. Reason: PENDING
2023-02-21 03:49:46,506 Sleeping for 5s. Reason: PENDING
2023-02-21 03:49:52,124 Sleeping for 5s. Reason: PENDING
2023-02-21 03:49:57,742 Sleeping for 9s. Reason: PENDING
2023-02-21 03:50:07,351 Sleeping for 10s. Reason: PENDING
2023-02-21 03:50:17,964 Sleeping for 8s. Reason: PENDING
2023-02-21 03:50:26,583 Sleeping for 10s. Reason: PENDING
2023-02-21 03:50:37,187 Sleeping for 8s. Reason: PENDING
2023-02-21 03:50:45,804 Sleeping for 7s. Reason: PENDING
2023-02-21 03:50:53,416 Sleeping for 6s. Reason: PENDING
2023-02-21 03:51:00,033 Sleeping for 9s. Reason: PENDING
2023-02-21 03:51:09,640 Sleeping for 8s. Reason: PENDING
2023-02-21 03:51:18,239 Sleeping for 8s. Reason: PENDING
2023-02-21 03:51:26,851 Sleeping for 8s. Reason: PENDING
2023-02-21 03:51:35,462 Sleeping for 7s. Reason: PENDING
2023-02-21 03:51:43,061 Sleeping for 10s. Reason: PENDING
2023-02-21 03:51:53,684 Sleeping for 8s. Reason: PENDING
2023-02-21 03:52:02,291 Sleeping for 5s. Reason: PENDING
2023-02-21 03:52:07,885 Sleeping for 9s. Reason: PENDING
2023-02-21 03:52:17,486 Sleeping for 5s. Reason: PENDING
2023-02-21 03:52:23,080 Sleeping for 6s. Reason: PENDING
2023-02-21 03:52:29,702 Sleeping for 10s. Reason: PENDING
2023-02-21 03:52:40,321 Sleeping for 10s. Reason: PENDING
2023-02-21 03:52:50,940 Sleeping for 10s. Reason: PENDING
2023-02-21 03:53:01,560 Sleeping for 7s. Reason: PENDING
2023-02-21 03:53:09,192 Sleeping for 9s. Reason: PENDING
2023-02-21 03:53:18,792 Sleeping for 9s. Reason: PENDING
2023-02-21 03:53:28,414 Sleeping for 10s. Reason: PENDING
2023-02-21 03:53:39,045 Sleeping for 5s. Reason: PENDING
2023-02-21 03:53:44,637 Sleeping for 6s. Reason: PENDING
2023-02-21 03:53:51,237 Sleeping for 10s. Reason: PENDING
2023-02-21 03:54:01,859 Sleeping for 7s. Reason: PENDING
2023-02-21 03:54:09,477 Sleeping for 6s. Reason: PENDING
2023-02-21 03:54:16,089 Sleeping for 5s. Reason: PENDING
2023-02-21 03:54:21,692 Sleeping for 6s. Reason: PENDING
2023-02-21 03:54:28,296 Sleeping for 10s. Reason: PENDING
2023-02-21 03:54:38,903 Sleeping for 8s. Reason: PENDING
2023-02-21 03:54:47,509 Sleeping for 9s. Reason: PENDING
2023-02-21 03:54:57,122 Sleeping for 9s. Reason: PENDING
2023-02-21 03:55:06,738 Sleeping for 9s. Reason: PENDING
2023-02-21 03:55:16,350 Sleeping for 9s. Reason: PENDING
2023-02-21 03:55:25,960 Sleeping for 8s. Reason: PENDING
2023-02-21 03:55:34,575 Sleeping for 7s. Reason: PENDING
2023-02-21 03:55:42,174 Sleeping for 5s. Reason: PENDING
2023-02-21 03:55:47,781 Sleeping for 9s. Reason: PENDING
2023-02-21 03:55:57,388 Sleeping for 8s. Reason: PENDING
2023-02-21 03:56:06,009 Sleeping for 10s. Reason: PENDING
2023-02-21 03:56:16,643 Sleeping for 10s. Reason: PENDING
2023-02-21 03:56:27,267 Sleeping for 10s. Reason: PENDING
2023-02-21 03:56:37,881 Sleeping for 6s. Reason: PENDING
2023-02-21 03:56:44,488 Sleeping for 8s. Reason: PENDING
2023-02-21 03:56:53,108 Sleeping for 7s. Reason: PENDING
2023-02-21 03:57:00,732 Sleeping for 6s. Reason: PENDING
2023-02-21 03:57:07,350 Sleeping for 7s. Reason: PENDING
2023-02-21 03:57:14,973 Sleeping for 9s. Reason: PENDING
2023-02-21 03:57:24,602 Sleeping for 9s. Reason: PENDING
2023-02-21 03:57:34,227 Sleeping for 7s. Reason: PENDING
2023-02-21 03:57:41,836 Sleeping for 5s. Reason: PENDING
2023-02-21 03:57:47,458 Sleeping for 6s. Reason: PENDING
2023-02-21 03:57:54,081 Sleeping for 6s. Reason: PENDING
2023-02-21 03:58:00,685 Sleeping for 8s. Reason: PENDING
2023-02-21 03:58:09,306 Sleeping for 5s. Reason: PENDING
2023-02-21 03:58:14,916 Sleeping for 7s. Reason: PENDING
2023-02-21 03:58:22,523 Sleeping for 7s. Reason: RUNNING
2023-02-21 03:58:31,387 Padding length to 36
2023-02-21 03:58:32,293 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.9 pTM=0.465
2023-02-21 03:58:33,169 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=83.1 pTM=0.489 tol=0.26
2023-02-21 03:58:34,045 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=83.3 pTM=0.49 tol=0.0726
2023-02-21 03:58:34,920 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.1 pTM=0.487 tol=0.0506
2023-02-21 03:58:34,920 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:58:35,803 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=80.4 pTM=0.455
2023-02-21 03:58:36,682 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=80.1 pTM=0.466 tol=0.218
2023-02-21 03:58:37,560 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=80.6 pTM=0.467 tol=0.163
2023-02-21 03:58:38,439 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=80.2 pTM=0.468 tol=0.0894
2023-02-21 03:58:38,439 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:58:39,321 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.9 pTM=0.511
2023-02-21 03:58:40,200 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=84.8 pTM=0.517 tol=0.399
2023-02-21 03:58:41,078 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=85.4 pTM=0.521 tol=0.161
2023-02-21 03:58:41,956 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=86.2 pTM=0.527 tol=0.176
2023-02-21 03:58:41,956 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:58:42,836 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=83.8 pTM=0.496
2023-02-21 03:58:43,712 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=83.8 pTM=0.5 tol=0.303
2023-02-21 03:58:44,588 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=84.1 pTM=0.502 tol=0.0939
2023-02-21 03:58:45,463 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=83.8 pTM=0.5 tol=0.0509
2023-02-21 03:58:45,463 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:58:46,346 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.9 pTM=0.501
2023-02-21 03:58:47,224 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=83.2 pTM=0.498 tol=0.163
2023-02-21 03:58:48,101 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.7 pTM=0.495 tol=0.305
2023-02-21 03:58:48,980 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=84.4 pTM=0.502 tol=0.31
2023-02-21 03:58:48,980 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:58:48,983 reranking models by 'plddt' metric
2023-02-21 03:58:48,983 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=86.2 pTM=0.527
2023-02-21 03:58:48,983 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=84.4 pTM=0.502
2023-02-21 03:58:48,983 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=83.8 pTM=0.5
2023-02-21 03:58:48,983 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=83.1 pTM=0.487
2023-02-21 03:58:48,983 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=80.2 pTM=0.468
2023-02-21 03:58:49,655 Query 76/80: 2po8 (length 34)
2023-02-21 03:58:50,259 Sleeping for 10s. Reason: PENDING
2023-02-21 03:59:02,103 Padding length to 36
2023-02-21 03:59:02,998 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.8 pTM=0.474
2023-02-21 03:59:03,874 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=82.1 pTM=0.481 tol=0.221
2023-02-21 03:59:04,749 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=82.2 pTM=0.481 tol=0.066
2023-02-21 03:59:05,625 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.2 pTM=0.479 tol=0.0377
2023-02-21 03:59:05,625 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:06,507 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=80.9 pTM=0.478
2023-02-21 03:59:07,386 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=83.4 pTM=0.497 tol=0.256
2023-02-21 03:59:08,264 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.9 pTM=0.5 tol=0.0479
2023-02-21 03:59:09,144 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.4 pTM=0.506 tol=0.0285
2023-02-21 03:59:09,144 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:10,034 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.7 pTM=0.503
2023-02-21 03:59:10,913 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=84.2 pTM=0.509 tol=0.208
2023-02-21 03:59:11,791 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=84.2 pTM=0.506 tol=0.0618
2023-02-21 03:59:12,670 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=84.4 pTM=0.51 tol=0.0587
2023-02-21 03:59:12,670 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:13,551 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.9 pTM=0.528
2023-02-21 03:59:14,427 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.5 pTM=0.539 tol=0.173
2023-02-21 03:59:15,303 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.2 pTM=0.53 tol=0.056
2023-02-21 03:59:16,179 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.2 pTM=0.534 tol=0.0713
2023-02-21 03:59:16,179 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:17,061 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=84.8 pTM=0.522
2023-02-21 03:59:17,939 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.4 pTM=0.546 tol=0.132
2023-02-21 03:59:18,817 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.2 pTM=0.541 tol=0.0762
2023-02-21 03:59:19,696 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.6 pTM=0.545 tol=0.0504
2023-02-21 03:59:19,696 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:19,703 reranking models by 'plddt' metric
2023-02-21 03:59:19,703 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=86.6 pTM=0.545
2023-02-21 03:59:19,703 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=86.2 pTM=0.534
2023-02-21 03:59:19,703 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=84.4 pTM=0.51
2023-02-21 03:59:19,703 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=84.4 pTM=0.506
2023-02-21 03:59:19,704 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=82.2 pTM=0.479
2023-02-21 03:59:20,519 Query 77/80: 5wov (length 34)
2023-02-21 03:59:23,034 Padding length to 36
2023-02-21 03:59:23,931 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.7 pTM=0.449
2023-02-21 03:59:24,811 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=79.8 pTM=0.446 tol=0.475
2023-02-21 03:59:25,686 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.4 pTM=0.444 tol=0.0652
2023-02-21 03:59:26,561 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=81.8 pTM=0.459 tol=0.0519
2023-02-21 03:59:26,562 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:27,444 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.9 pTM=0.482
2023-02-21 03:59:28,323 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=83.1 pTM=0.487 tol=0.175
2023-02-21 03:59:29,201 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=84.4 pTM=0.497 tol=0.14
2023-02-21 03:59:30,080 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85.9 pTM=0.515 tol=0.0475
2023-02-21 03:59:30,080 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:30,962 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.8 pTM=0.477
2023-02-21 03:59:31,845 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81.8 pTM=0.473 tol=0.42
2023-02-21 03:59:32,723 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=83.8 pTM=0.505 tol=0.212
2023-02-21 03:59:33,603 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=85.6 pTM=0.524 tol=0.0923
2023-02-21 03:59:33,603 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:34,483 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=81.9 pTM=0.473
2023-02-21 03:59:35,359 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85.1 pTM=0.496 tol=0.195
2023-02-21 03:59:36,235 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.4 pTM=0.509 tol=0.0666
2023-02-21 03:59:37,111 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.8 pTM=0.514 tol=0.0509
2023-02-21 03:59:37,111 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:37,993 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=79.8 pTM=0.444
2023-02-21 03:59:38,871 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=82 pTM=0.458 tol=0.353
2023-02-21 03:59:39,748 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.2 pTM=0.47 tol=0.0837
2023-02-21 03:59:40,627 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=83.1 pTM=0.463 tol=0.0389
2023-02-21 03:59:40,627 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 03:59:40,630 reranking models by 'plddt' metric
2023-02-21 03:59:40,630 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=86.8 pTM=0.514
2023-02-21 03:59:40,630 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=85.9 pTM=0.515
2023-02-21 03:59:40,631 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=85.6 pTM=0.524
2023-02-21 03:59:40,631 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=83.1 pTM=0.463
2023-02-21 03:59:40,631 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=81.8 pTM=0.459
2023-02-21 03:59:41,303 Query 78/80: 1r1f (length 37)
2023-02-21 03:59:41,903 Sleeping for 8s. Reason: PENDING
2023-02-21 03:59:51,917 Padding length to 39
2023-02-21 04:00:00,204 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=55.9 pTM=0.234
2023-02-21 04:00:01,104 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=71.1 pTM=0.411 tol=1.48
2023-02-21 04:00:02,004 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.8 pTM=0.494 tol=0.575
2023-02-21 04:00:02,904 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.6 pTM=0.514 tol=0.135
2023-02-21 04:00:02,904 alphafold2_ptm_model_1_seed_000 took 11.0s (3 recycles)
2023-02-21 04:00:03,810 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=57.8 pTM=0.283
2023-02-21 04:00:04,712 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.383 tol=1.84
2023-02-21 04:00:05,614 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=75.5 pTM=0.467 tol=0.308
2023-02-21 04:00:06,516 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.4 pTM=0.524 tol=0.221
2023-02-21 04:00:06,516 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:07,423 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.7 pTM=0.426
2023-02-21 04:00:08,325 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=80.6 pTM=0.464 tol=1.04
2023-02-21 04:00:09,228 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.6 pTM=0.482 tol=0.107
2023-02-21 04:00:10,135 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.8 pTM=0.492 tol=0.0475
2023-02-21 04:00:10,135 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:11,040 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=69.3 pTM=0.352
2023-02-21 04:00:11,941 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.419 tol=0.965
2023-02-21 04:00:12,841 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.2 pTM=0.417 tol=0.144
2023-02-21 04:00:13,742 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.7 pTM=0.428 tol=0.0645
2023-02-21 04:00:13,742 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:14,648 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.4 pTM=0.356
2023-02-21 04:00:15,551 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.6 pTM=0.474 tol=0.852
2023-02-21 04:00:16,453 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=84 pTM=0.533 tol=0.184
2023-02-21 04:00:17,356 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=85.8 pTM=0.554 tol=0.0452
2023-02-21 04:00:17,356 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:17,360 reranking models by 'plddt' metric
2023-02-21 04:00:17,360 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=85.8 pTM=0.554
2023-02-21 04:00:17,360 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=83.8 pTM=0.492
2023-02-21 04:00:17,360 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=83.6 pTM=0.514
2023-02-21 04:00:17,360 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=82.4 pTM=0.524
2023-02-21 04:00:17,360 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=74.7 pTM=0.428
2023-02-21 04:00:18,035 Query 79/80: 2mt8 (length 39)
2023-02-21 04:00:18,662 Sleeping for 9s. Reason: PENDING
2023-02-21 04:00:28,292 Sleeping for 7s. Reason: RUNNING
2023-02-21 04:00:38,093 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.6 pTM=0.441
2023-02-21 04:00:38,993 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.6 pTM=0.403 tol=0.523
2023-02-21 04:00:39,901 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=68.8 pTM=0.403 tol=0.13
2023-02-21 04:00:40,801 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=67.9 pTM=0.392 tol=0.123
2023-02-21 04:00:40,801 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:41,708 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=69.7 pTM=0.433
2023-02-21 04:00:42,611 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.4 pTM=0.402 tol=0.457
2023-02-21 04:00:43,519 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.8 pTM=0.399 tol=0.394
2023-02-21 04:00:44,427 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=65.9 pTM=0.39 tol=0.233
2023-02-21 04:00:44,427 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:45,340 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=73.1 pTM=0.446
2023-02-21 04:00:46,248 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.3 pTM=0.423 tol=0.417
2023-02-21 04:00:47,156 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=72.4 pTM=0.424 tol=0.151
2023-02-21 04:00:48,065 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.4 pTM=0.434 tol=0.163
2023-02-21 04:00:48,065 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:48,976 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.4 pTM=0.434
2023-02-21 04:00:49,882 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=69.9 pTM=0.4 tol=0.491
2023-02-21 04:00:50,788 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=70 pTM=0.397 tol=0.156
2023-02-21 04:00:51,695 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=69.8 pTM=0.394 tol=0.0725
2023-02-21 04:00:51,695 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:52,607 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.9 pTM=0.392
2023-02-21 04:00:53,515 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=70.6 pTM=0.393 tol=0.549
2023-02-21 04:00:54,423 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=72.7 pTM=0.404 tol=0.177
2023-02-21 04:00:55,337 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74 pTM=0.422 tol=0.13
2023-02-21 04:00:55,337 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 04:00:55,341 reranking models by 'plddt' metric
2023-02-21 04:00:55,341 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=74.4 pTM=0.434
2023-02-21 04:00:55,341 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=74 pTM=0.422
2023-02-21 04:00:55,341 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=69.8 pTM=0.394
2023-02-21 04:00:55,341 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=67.9 pTM=0.392
2023-02-21 04:00:55,341 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=65.9 pTM=0.39
2023-02-21 04:00:56,145 Query 80/80: 5wow (length 39)
2023-02-21 04:00:56,742 Sleeping for 7s. Reason: PENDING
2023-02-21 04:01:04,340 Sleeping for 7s. Reason: RUNNING
2023-02-21 04:01:15,017 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.5 pTM=0.458
2023-02-21 04:01:15,917 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=77.6 pTM=0.503 tol=0.852
2023-02-21 04:01:16,822 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=78.4 pTM=0.498 tol=0.448
2023-02-21 04:01:17,728 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=77.5 pTM=0.485 tol=0.137
2023-02-21 04:01:17,728 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 04:01:18,649 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.2 pTM=0.456
2023-02-21 04:01:19,557 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.5 pTM=0.494 tol=0.758
2023-02-21 04:01:20,465 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=80 pTM=0.519 tol=0.332
2023-02-21 04:01:21,373 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=79.9 pTM=0.509 tol=0.114
2023-02-21 04:01:21,373 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 04:01:22,286 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.492
2023-02-21 04:01:23,195 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81 pTM=0.533 tol=0.736
2023-02-21 04:01:24,103 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=83 pTM=0.545 tol=0.575
2023-02-21 04:01:25,017 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=82.7 pTM=0.534 tol=0.232
2023-02-21 04:01:25,017 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 04:01:25,928 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=76.9 pTM=0.479
2023-02-21 04:01:26,835 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.8 pTM=0.513 tol=0.569
2023-02-21 04:01:27,741 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.1 pTM=0.511 tol=0.337
2023-02-21 04:01:28,648 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=81.6 pTM=0.515 tol=0.119
2023-02-21 04:01:28,648 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 04:01:29,560 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.1 pTM=0.455
2023-02-21 04:01:30,469 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=76.3 pTM=0.472 tol=0.684
2023-02-21 04:01:31,376 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=78.2 pTM=0.488 tol=0.174
2023-02-21 04:01:32,285 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=77.6 pTM=0.488 tol=0.582
2023-02-21 04:01:32,285 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 04:01:32,289 reranking models by 'plddt' metric
2023-02-21 04:01:32,289 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=82.7 pTM=0.534
2023-02-21 04:01:32,289 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=81.6 pTM=0.515
2023-02-21 04:01:32,289 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=79.9 pTM=0.509
2023-02-21 04:01:32,289 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=77.6 pTM=0.488
2023-02-21 04:01:32,289 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=77.5 pTM=0.485
2023-02-21 04:01:33,108 Done
