2023-02-21 07:50:34,633 Running colabfold 1.6.0 (f20a7e3cc0f2487c44335dc7281adf4cbc5aef3f)
2023-02-21 07:50:34,761 Running on GPU
2023-02-21 07:50:35,127 Found 4 citations for tools or databases
2023-02-21 07:50:35,127 Query 1/80: 6dny (length 4)
2023-02-21 07:50:40,824 Padding length to 14
2023-02-21 07:50:50,016 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.1 pTM=0.0928
2023-02-21 07:50:50,754 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=22.2 pTM=0.000321 tol=8.47
2023-02-21 07:50:51,491 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=12.4 pTM=0.000437 tol=8.76
2023-02-21 07:50:52,228 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=24.5 pTM=0.000271 tol=14.5
2023-02-21 07:50:52,228 alphafold2_ptm_model_1_seed_000 took 11.4s (3 recycles)
2023-02-21 07:50:52,968 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=72.4 pTM=0.0926
2023-02-21 07:50:53,705 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=39.4 pTM=0.0798 tol=4.15
2023-02-21 07:50:54,442 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=49.2 pTM=0.000305 tol=49.1
2023-02-21 07:50:55,180 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=30.8 pTM=0.000284 tol=18
2023-02-21 07:50:55,180 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:50:55,919 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.4 pTM=0.0918
2023-02-21 07:50:56,656 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=59.1 pTM=0.0906 tol=1.58
2023-02-21 07:50:57,393 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=64.7 pTM=0.0883 tol=0.718
2023-02-21 07:50:58,131 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=53.8 pTM=0.0851 tol=1.04
2023-02-21 07:50:58,131 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 07:50:58,870 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=67.4 pTM=0.0922
2023-02-21 07:50:59,607 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=42.7 pTM=0.0835 tol=1.03
2023-02-21 07:51:00,344 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=43.2 pTM=0.000175 tol=30.7
2023-02-21 07:51:01,081 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=49.1 pTM=0.000387 tol=12.2
2023-02-21 07:51:01,081 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:01,820 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65.8 pTM=0.0931
2023-02-21 07:51:02,557 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=52.4 pTM=0.0832 tol=1.95
2023-02-21 07:51:03,293 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=33.5 pTM=0.0711 tol=4.11
2023-02-21 07:51:04,030 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=35.8 pTM=0.000409 tol=49.2
2023-02-21 07:51:04,030 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:04,031 reranking models by 'plddt' metric
2023-02-21 07:51:04,031 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=53.8 pTM=0.0851
2023-02-21 07:51:04,031 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=49.1 pTM=0.000387
2023-02-21 07:51:04,031 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=35.8 pTM=0.000409
2023-02-21 07:51:04,031 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=30.8 pTM=0.000284
2023-02-21 07:51:04,031 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=24.5 pTM=0.000271
2023-02-21 07:51:04,758 Query 2/80: 1qvk (length 6)
2023-02-21 07:51:06,587 Padding length to 14
2023-02-21 07:51:07,335 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.2 pTM=0.0609
2023-02-21 07:51:08,072 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=71.3 pTM=0.0611 tol=0.183
2023-02-21 07:51:08,808 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=70.3 pTM=0.0603 tol=0.166
2023-02-21 07:51:09,549 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.0572 tol=1.62
2023-02-21 07:51:09,549 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:10,294 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.0612
2023-02-21 07:51:11,032 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.0615 tol=0.173
2023-02-21 07:51:11,769 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=68.6 pTM=0.0612 tol=1.25
2023-02-21 07:51:12,507 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.9 pTM=0.061 tol=1.31
2023-02-21 07:51:12,507 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:13,246 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.6 pTM=0.0632
2023-02-21 07:51:13,983 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.063 tol=0.913
2023-02-21 07:51:14,720 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=73.8 pTM=0.063 tol=0.754
2023-02-21 07:51:15,457 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.6 pTM=0.063 tol=0.462
2023-02-21 07:51:15,458 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:16,196 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0611
2023-02-21 07:51:16,934 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.6 pTM=0.0616 tol=0.241
2023-02-21 07:51:17,670 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.2 pTM=0.0614 tol=0.111
2023-02-21 07:51:18,415 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.2 pTM=0.0614 tol=0.0629
2023-02-21 07:51:18,416 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:19,154 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.061
2023-02-21 07:51:19,891 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.2 pTM=0.0616 tol=0.335
2023-02-21 07:51:20,628 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=69.6 pTM=0.0619 tol=0.0646
2023-02-21 07:51:21,365 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.5 pTM=0.0619 tol=0.241
2023-02-21 07:51:21,365 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:21,367 reranking models by 'plddt' metric
2023-02-21 07:51:21,367 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=74.2 pTM=0.0614
2023-02-21 07:51:21,367 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=71.6 pTM=0.063
2023-02-21 07:51:21,367 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=70.5 pTM=0.0619
2023-02-21 07:51:21,367 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=67.9 pTM=0.061
2023-02-21 07:51:21,367 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=56.6 pTM=0.0572
2023-02-21 07:51:22,032 Query 3/80: 1qvl (length 6)
2023-02-21 07:51:24,024 Padding length to 14
2023-02-21 07:51:24,784 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.2 pTM=0.0609
2023-02-21 07:51:25,526 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=71.3 pTM=0.0611 tol=0.183
2023-02-21 07:51:26,263 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=70.3 pTM=0.0603 tol=0.166
2023-02-21 07:51:27,000 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.0572 tol=1.62
2023-02-21 07:51:27,000 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:27,739 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.0612
2023-02-21 07:51:28,477 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.0615 tol=0.173
2023-02-21 07:51:29,214 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=68.6 pTM=0.0612 tol=1.25
2023-02-21 07:51:29,951 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.9 pTM=0.061 tol=1.31
2023-02-21 07:51:29,952 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:30,690 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.6 pTM=0.0632
2023-02-21 07:51:31,433 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.063 tol=0.913
2023-02-21 07:51:32,170 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=73.8 pTM=0.063 tol=0.754
2023-02-21 07:51:32,907 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.6 pTM=0.063 tol=0.462
2023-02-21 07:51:32,907 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:33,646 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0611
2023-02-21 07:51:34,383 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.6 pTM=0.0616 tol=0.241
2023-02-21 07:51:35,120 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.2 pTM=0.0614 tol=0.111
2023-02-21 07:51:35,857 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.2 pTM=0.0614 tol=0.0629
2023-02-21 07:51:35,857 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:36,596 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.061
2023-02-21 07:51:37,333 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.2 pTM=0.0616 tol=0.335
2023-02-21 07:51:38,069 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=69.6 pTM=0.0619 tol=0.0646
2023-02-21 07:51:38,807 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.5 pTM=0.0619 tol=0.241
2023-02-21 07:51:38,807 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:38,808 reranking models by 'plddt' metric
2023-02-21 07:51:38,808 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=74.2 pTM=0.0614
2023-02-21 07:51:38,808 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=71.6 pTM=0.063
2023-02-21 07:51:38,808 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=70.5 pTM=0.0619
2023-02-21 07:51:38,808 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=67.9 pTM=0.061
2023-02-21 07:51:38,808 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=56.6 pTM=0.0572
2023-02-21 07:51:39,473 Query 4/80: 1ski (length 6)
2023-02-21 07:51:41,309 Padding length to 14
2023-02-21 07:51:42,062 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.1 pTM=0.0607
2023-02-21 07:51:42,799 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.9 pTM=0.0596 tol=0.502
2023-02-21 07:51:43,542 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=74.3 pTM=0.0592 tol=0.136
2023-02-21 07:51:44,279 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=71.8 pTM=0.0588 tol=0.146
2023-02-21 07:51:44,279 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:45,019 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.0625
2023-02-21 07:51:45,756 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=73 pTM=0.0617 tol=0.171
2023-02-21 07:51:46,493 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.0615 tol=0.0872
2023-02-21 07:51:47,230 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.3 pTM=0.0615 tol=0.0323
2023-02-21 07:51:47,230 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:47,969 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=70.9 pTM=0.0614
2023-02-21 07:51:48,706 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.9 pTM=0.0626 tol=0.369
2023-02-21 07:51:49,443 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=77.9 pTM=0.0627 tol=0.0677
2023-02-21 07:51:50,180 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=78.2 pTM=0.0626 tol=0.0432
2023-02-21 07:51:50,180 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:50,919 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74.5 pTM=0.0591
2023-02-21 07:51:51,656 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76 pTM=0.0607 tol=0.264
2023-02-21 07:51:52,393 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.6 pTM=0.0608 tol=0.08
2023-02-21 07:51:53,130 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.6 pTM=0.0606 tol=0.036
2023-02-21 07:51:53,130 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:51:53,869 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=61.3 pTM=0.0628
2023-02-21 07:51:54,607 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.9 pTM=0.0642 tol=1.68
2023-02-21 07:51:55,347 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.9 pTM=0.064 tol=0.0328
2023-02-21 07:51:56,085 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74.1 pTM=0.0638 tol=0.0414
2023-02-21 07:51:56,085 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:51:56,086 reranking models by 'plddt' metric
2023-02-21 07:51:56,086 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=78.2 pTM=0.0626
2023-02-21 07:51:56,086 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=75.6 pTM=0.0606
2023-02-21 07:51:56,086 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=74.3 pTM=0.0615
2023-02-21 07:51:56,086 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=74.1 pTM=0.0638
2023-02-21 07:51:56,086 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=71.8 pTM=0.0588
2023-02-21 07:51:56,903 Query 5/80: 1skk (length 6)
2023-02-21 07:51:58,745 Padding length to 14
2023-02-21 07:51:59,494 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.9 pTM=0.0635
2023-02-21 07:52:00,231 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=70.2 pTM=0.0628 tol=0.159
2023-02-21 07:52:00,968 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=58.4 pTM=0.0608 tol=1.84
2023-02-21 07:52:01,705 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=55.6 pTM=0.0605 tol=1.2
2023-02-21 07:52:01,705 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:02,444 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=64.6 pTM=0.0622
2023-02-21 07:52:03,182 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.0632 tol=0.768
2023-02-21 07:52:03,918 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=57.8 pTM=0.0635 tol=0.473
2023-02-21 07:52:04,656 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.0637 tol=0.558
2023-02-21 07:52:04,656 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 07:52:05,394 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=79.1 pTM=0.0643
2023-02-21 07:52:06,131 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.7 pTM=0.0639 tol=0.0945
2023-02-21 07:52:06,869 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=76.1 pTM=0.064 tol=0.0374
2023-02-21 07:52:07,606 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=75.9 pTM=0.0641 tol=0.0303
2023-02-21 07:52:07,607 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 07:52:08,345 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.9 pTM=0.0623
2023-02-21 07:52:09,088 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=68.1 pTM=0.063 tol=0.0939
2023-02-21 07:52:09,828 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=71.4 pTM=0.0632 tol=0.185
2023-02-21 07:52:10,565 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=71.7 pTM=0.0634 tol=0.025
2023-02-21 07:52:10,566 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:11,304 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=62.1 pTM=0.0626
2023-02-21 07:52:12,041 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.0632 tol=0.687
2023-02-21 07:52:12,781 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=71.2 pTM=0.064 tol=0.242
2023-02-21 07:52:13,518 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.5 pTM=0.0642 tol=0.104
2023-02-21 07:52:13,518 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:13,519 reranking models by 'plddt' metric
2023-02-21 07:52:13,519 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=75.9 pTM=0.0641
2023-02-21 07:52:13,519 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=71.7 pTM=0.0634
2023-02-21 07:52:13,519 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=70.5 pTM=0.0642
2023-02-21 07:52:13,520 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=65.1 pTM=0.0637
2023-02-21 07:52:13,520 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=55.6 pTM=0.0605
2023-02-21 07:52:14,187 Query 6/80: 2otq (length 6)
2023-02-21 07:52:16,040 Padding length to 14
2023-02-21 07:52:16,798 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.6 pTM=0.0606
2023-02-21 07:52:17,534 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.0603 tol=0.818
2023-02-21 07:52:18,271 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=75.5 pTM=0.0596 tol=0.169
2023-02-21 07:52:19,007 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=74.2 pTM=0.0592 tol=0.443
2023-02-21 07:52:19,008 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:19,747 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.8 pTM=0.0611
2023-02-21 07:52:20,484 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=75.1 pTM=0.0604 tol=0.173
2023-02-21 07:52:21,221 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=75 pTM=0.0603 tol=0.0671
2023-02-21 07:52:22,039 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.3 pTM=0.0601 tol=0.0762
2023-02-21 07:52:22,039 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:22,780 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.2 pTM=0.0631
2023-02-21 07:52:23,517 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.0625 tol=0.472
2023-02-21 07:52:24,254 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=73.4 pTM=0.0624 tol=0.0343
2023-02-21 07:52:24,991 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=77.4 pTM=0.0622 tol=0.0994
2023-02-21 07:52:24,991 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:25,733 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74 pTM=0.0607
2023-02-21 07:52:26,471 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76.1 pTM=0.0612 tol=0.211
2023-02-21 07:52:27,208 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.8 pTM=0.0612 tol=0.185
2023-02-21 07:52:27,945 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.6 pTM=0.0612 tol=0.0235
2023-02-21 07:52:27,945 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:28,684 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.1 pTM=0.0627
2023-02-21 07:52:29,421 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=74.7 pTM=0.0618 tol=0.34
2023-02-21 07:52:30,161 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=75.6 pTM=0.0619 tol=0.16
2023-02-21 07:52:30,898 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=75.9 pTM=0.0618 tol=0.0619
2023-02-21 07:52:30,898 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:30,900 reranking models by 'plddt' metric
2023-02-21 07:52:30,900 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=77.4 pTM=0.0622
2023-02-21 07:52:30,900 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=75.9 pTM=0.0618
2023-02-21 07:52:30,900 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.6 pTM=0.0612
2023-02-21 07:52:30,900 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=74.3 pTM=0.0601
2023-02-21 07:52:30,900 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=74.2 pTM=0.0592
2023-02-21 07:52:31,724 Query 7/80: 2ox2 (length 6)
2023-02-21 07:52:33,601 Padding length to 14
2023-02-21 07:52:34,361 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.5 pTM=0.061
2023-02-21 07:52:35,105 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=74.4 pTM=0.0601 tol=0.137
2023-02-21 07:52:35,848 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.2 pTM=0.0597 tol=1.04
2023-02-21 07:52:36,586 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=61.9 pTM=0.0607 tol=1.41
2023-02-21 07:52:36,586 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:37,345 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.2 pTM=0.0613
2023-02-21 07:52:38,082 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=76.3 pTM=0.0606 tol=0.237
2023-02-21 07:52:38,819 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.0606 tol=0.241
2023-02-21 07:52:39,557 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=73.8 pTM=0.0604 tol=0.0459
2023-02-21 07:52:39,557 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:40,301 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=82.2 pTM=0.0633
2023-02-21 07:52:41,038 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=70.9 pTM=0.0624 tol=1.63
2023-02-21 07:52:41,774 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=77.4 pTM=0.0623 tol=1.35
2023-02-21 07:52:42,512 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.2 pTM=0.0622 tol=0.48
2023-02-21 07:52:42,512 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:43,250 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.0611
2023-02-21 07:52:43,988 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=76.4 pTM=0.0614 tol=0.117
2023-02-21 07:52:44,724 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.1 pTM=0.0615 tol=0.0527
2023-02-21 07:52:45,461 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.7 pTM=0.0613 tol=0.0385
2023-02-21 07:52:45,461 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:52:46,200 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=71.4 pTM=0.0625
2023-02-21 07:52:46,937 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.0621 tol=0.125
2023-02-21 07:52:47,674 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.0622 tol=0.127
2023-02-21 07:52:48,411 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.8 pTM=0.0622 tol=0.0358
2023-02-21 07:52:48,411 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 07:52:48,412 reranking models by 'plddt' metric
2023-02-21 07:52:48,412 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=74.7 pTM=0.0613
2023-02-21 07:52:48,412 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=73.8 pTM=0.0604
2023-02-21 07:52:48,412 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=73.2 pTM=0.0622
2023-02-21 07:52:48,412 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=72.8 pTM=0.0622
2023-02-21 07:52:48,413 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=61.9 pTM=0.0607
2023-02-21 07:52:49,220 Query 8/80: 7m2a (length 7)
2023-02-21 07:52:51,062 Padding length to 14
2023-02-21 07:52:51,817 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.6 pTM=0.0601
2023-02-21 07:52:52,554 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.8 pTM=0.0649 tol=0.537
2023-02-21 07:52:53,290 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.2 pTM=0.0618 tol=0.0817
2023-02-21 07:52:54,027 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=55.3 pTM=0.0559 tol=2.48
2023-02-21 07:52:54,027 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:54,766 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0586
2023-02-21 07:52:55,507 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86 pTM=0.0602 tol=0.202
2023-02-21 07:52:56,244 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.2 pTM=0.0596 tol=0.055
2023-02-21 07:52:56,981 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.6 pTM=0.0598 tol=0.0127
2023-02-21 07:52:56,981 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:52:57,720 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=78.6 pTM=0.0565
2023-02-21 07:52:58,457 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=79 pTM=0.059 tol=0.502
2023-02-21 07:52:59,197 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.1 pTM=0.0602 tol=0.152
2023-02-21 07:52:59,935 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=79.8 pTM=0.0606 tol=0.186
2023-02-21 07:52:59,935 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:00,674 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=79.2 pTM=0.0564
2023-02-21 07:53:01,411 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.9 pTM=0.0598 tol=0.182
2023-02-21 07:53:02,147 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.2 pTM=0.0603 tol=0.036
2023-02-21 07:53:02,885 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=80.6 pTM=0.0603 tol=0.0594
2023-02-21 07:53:02,885 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:53:03,624 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=79.2 pTM=0.0583
2023-02-21 07:53:04,361 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.8 pTM=0.0596 tol=0.115
2023-02-21 07:53:05,097 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.3 pTM=0.0603 tol=0.0622
2023-02-21 07:53:05,835 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.1 pTM=0.0605 tol=0.0376
2023-02-21 07:53:05,835 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 07:53:05,836 reranking models by 'plddt' metric
2023-02-21 07:53:05,836 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=84.6 pTM=0.0598
2023-02-21 07:53:05,836 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=82.1 pTM=0.0605
2023-02-21 07:53:05,836 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=80.6 pTM=0.0603
2023-02-21 07:53:05,837 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=79.8 pTM=0.0606
2023-02-21 07:53:05,837 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=55.3 pTM=0.0559
2023-02-21 07:53:06,531 Query 9/80: 7m2c (length 7)
2023-02-21 07:53:08,382 Padding length to 14
2023-02-21 07:53:09,151 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.6 pTM=0.06
2023-02-21 07:53:09,893 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.6 pTM=0.0616 tol=0.295
2023-02-21 07:53:10,629 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.6 pTM=0.0574 tol=1.03
2023-02-21 07:53:11,374 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=59.3 pTM=0.0575 tol=2.73
2023-02-21 07:53:11,374 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:12,118 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=78.1 pTM=0.0576
2023-02-21 07:53:12,861 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.2 pTM=0.0587 tol=0.191
2023-02-21 07:53:13,597 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.7 pTM=0.0584 tol=0.0625
2023-02-21 07:53:14,339 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=77.9 pTM=0.0585 tol=0.041
2023-02-21 07:53:14,340 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:15,083 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.0571
2023-02-21 07:53:15,825 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=79.5 pTM=0.0573 tol=0.0762
2023-02-21 07:53:16,561 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.4 pTM=0.0583 tol=0.134
2023-02-21 07:53:17,304 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81.3 pTM=0.0587 tol=0.0772
2023-02-21 07:53:17,304 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:18,047 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=76.9 pTM=0.0579
2023-02-21 07:53:18,789 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=81.9 pTM=0.0594 tol=0.141
2023-02-21 07:53:19,526 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.1 pTM=0.0589 tol=0.03
2023-02-21 07:53:20,267 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=80.1 pTM=0.0589 tol=0.0347
2023-02-21 07:53:20,268 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:21,012 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.8 pTM=0.0585
2023-02-21 07:53:21,749 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=81.6 pTM=0.0595 tol=0.125
2023-02-21 07:53:22,485 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=80.9 pTM=0.06 tol=0.0215
2023-02-21 07:53:23,222 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.6 pTM=0.06 tol=0.0245
2023-02-21 07:53:23,222 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:23,223 reranking models by 'plddt' metric
2023-02-21 07:53:23,224 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=81.3 pTM=0.0587
2023-02-21 07:53:23,224 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=80.6 pTM=0.06
2023-02-21 07:53:23,224 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=80.1 pTM=0.0589
2023-02-21 07:53:23,224 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=77.9 pTM=0.0585
2023-02-21 07:53:23,224 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=59.3 pTM=0.0575
2023-02-21 07:53:24,054 Query 10/80: 7m28 (length 7)
2023-02-21 07:53:25,886 Padding length to 14
2023-02-21 07:53:26,638 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.0593
2023-02-21 07:53:27,375 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=79.1 pTM=0.0594 tol=0.538
2023-02-21 07:53:28,111 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.0585 tol=0.578
2023-02-21 07:53:28,848 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=66.1 pTM=0.0591 tol=2.76
2023-02-21 07:53:28,848 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:29,587 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=77.5 pTM=0.0576
2023-02-21 07:53:30,324 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.4 pTM=0.059 tol=0.28
2023-02-21 07:53:31,061 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=77.8 pTM=0.0596 tol=0.0696
2023-02-21 07:53:31,799 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=77.8 pTM=0.0598 tol=0.0233
2023-02-21 07:53:31,799 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 07:53:32,538 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.9 pTM=0.0576
2023-02-21 07:53:33,275 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=80.7 pTM=0.0586 tol=0.195
2023-02-21 07:53:34,012 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=81.9 pTM=0.0589 tol=0.138
2023-02-21 07:53:34,749 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81.8 pTM=0.059 tol=0.0929
2023-02-21 07:53:34,749 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 07:53:35,488 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=70.3 pTM=0.0551
2023-02-21 07:53:36,225 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=74.6 pTM=0.0573 tol=0.116
2023-02-21 07:53:36,962 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.1 pTM=0.0574 tol=0.0162
2023-02-21 07:53:37,699 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=73.9 pTM=0.0575 tol=0.0124
2023-02-21 07:53:37,699 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 07:53:38,438 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.2 pTM=0.0569
2023-02-21 07:53:39,175 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=70.2 pTM=0.0586 tol=0.843
2023-02-21 07:53:39,915 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.2 pTM=0.0591 tol=0.725
2023-02-21 07:53:40,652 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.3 pTM=0.0592 tol=0.127
2023-02-21 07:53:40,652 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:40,654 reranking models by 'plddt' metric
2023-02-21 07:53:40,654 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=82.3 pTM=0.0592
2023-02-21 07:53:40,654 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=81.8 pTM=0.059
2023-02-21 07:53:40,654 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=77.8 pTM=0.0598
2023-02-21 07:53:40,654 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=73.9 pTM=0.0575
2023-02-21 07:53:40,654 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=66.1 pTM=0.0591
2023-02-21 07:53:41,366 Query 11/80: 6wpv (length 8)
2023-02-21 07:53:43,357 Padding length to 14
2023-02-21 07:53:44,103 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=74.8 pTM=0.0539
2023-02-21 07:53:44,840 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=69.3 pTM=0.0557 tol=1.18
2023-02-21 07:53:45,577 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=79.3 pTM=0.0558 tol=1.1
2023-02-21 07:53:46,314 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=79.8 pTM=0.0557 tol=0.131
2023-02-21 07:53:46,314 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:47,054 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=75.9 pTM=0.0501
2023-02-21 07:53:47,792 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=78.9 pTM=0.0513 tol=0.723
2023-02-21 07:53:48,529 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.7 pTM=0.0514 tol=0.461
2023-02-21 07:53:49,269 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=77.1 pTM=0.0513 tol=0.191
2023-02-21 07:53:49,269 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:50,010 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.0503
2023-02-21 07:53:50,750 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=74.7 pTM=0.0508 tol=0.794
2023-02-21 07:53:51,489 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=72.8 pTM=0.0511 tol=0.408
2023-02-21 07:53:52,228 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=67.8 pTM=0.051 tol=1.41
2023-02-21 07:53:52,228 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:52,969 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.5 pTM=0.0506
2023-02-21 07:53:53,709 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.5 pTM=0.052 tol=0.476
2023-02-21 07:53:54,448 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.4 pTM=0.0523 tol=0.0628
2023-02-21 07:53:55,188 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.2 pTM=0.0522 tol=0.0137
2023-02-21 07:53:55,188 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:55,929 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=67.6 pTM=0.0528
2023-02-21 07:53:56,669 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=67.8 pTM=0.0556 tol=0.354
2023-02-21 07:53:57,408 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.5 pTM=0.0561 tol=0.155
2023-02-21 07:53:58,148 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.1 pTM=0.056 tol=0.109
2023-02-21 07:53:58,148 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:53:58,149 reranking models by 'plddt' metric
2023-02-21 07:53:58,149 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=79.8 pTM=0.0557
2023-02-21 07:53:58,149 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=77.1 pTM=0.0513
2023-02-21 07:53:58,149 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.2 pTM=0.0522
2023-02-21 07:53:58,150 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=68.1 pTM=0.056
2023-02-21 07:53:58,150 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=67.8 pTM=0.051
2023-02-21 07:53:58,835 Query 12/80: 7m2b (length 8)
2023-02-21 07:54:00,685 Padding length to 14
2023-02-21 07:54:01,438 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.9 pTM=0.0517
2023-02-21 07:54:02,178 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=74.8 pTM=0.0532 tol=0.533
2023-02-21 07:54:02,917 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=77.7 pTM=0.0536 tol=0.264
2023-02-21 07:54:03,657 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.9 pTM=0.054 tol=0.126
2023-02-21 07:54:03,657 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:04,399 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.5 pTM=0.0497
2023-02-21 07:54:05,145 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=72.3 pTM=0.0517 tol=0.473
2023-02-21 07:54:05,885 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.9 pTM=0.0527 tol=0.437
2023-02-21 07:54:06,625 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.3 pTM=0.0538 tol=0.298
2023-02-21 07:54:06,625 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:07,367 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=78.1 pTM=0.0514
2023-02-21 07:54:08,107 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81 pTM=0.0526 tol=0.374
2023-02-21 07:54:08,846 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.6 pTM=0.0523 tol=0.152
2023-02-21 07:54:09,586 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.8 pTM=0.0524 tol=0.0739
2023-02-21 07:54:09,586 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:10,328 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=73.1 pTM=0.0511
2023-02-21 07:54:11,068 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=79.9 pTM=0.0538 tol=0.553
2023-02-21 07:54:11,807 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=82.6 pTM=0.0551 tol=0.198
2023-02-21 07:54:12,547 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.2 pTM=0.056 tol=0.0669
2023-02-21 07:54:12,547 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:13,289 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74.1 pTM=0.0518
2023-02-21 07:54:14,028 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.2 pTM=0.0531 tol=0.0643
2023-02-21 07:54:14,768 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.2 pTM=0.0533 tol=0.323
2023-02-21 07:54:15,513 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.5 pTM=0.0537 tol=1.2
2023-02-21 07:54:15,513 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:15,515 reranking models by 'plddt' metric
2023-02-21 07:54:15,515 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=84.2 pTM=0.056
2023-02-21 07:54:15,515 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=80.8 pTM=0.0524
2023-02-21 07:54:15,515 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=78.9 pTM=0.054
2023-02-21 07:54:15,515 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=76.3 pTM=0.0538
2023-02-21 07:54:15,515 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=72.5 pTM=0.0537
2023-02-21 07:54:16,325 Query 13/80: 7m25 (length 8)
2023-02-21 07:54:18,176 Padding length to 14
2023-02-21 07:54:18,936 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.0532
2023-02-21 07:54:19,676 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.0537 tol=0.5
2023-02-21 07:54:20,415 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=68.6 pTM=0.0536 tol=0.117
2023-02-21 07:54:21,160 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.0536 tol=0.149
2023-02-21 07:54:21,160 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:21,908 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.9 pTM=0.0497
2023-02-21 07:54:22,652 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=72.2 pTM=0.0497 tol=0.246
2023-02-21 07:54:23,392 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=70 pTM=0.0499 tol=0.869
2023-02-21 07:54:24,132 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=71.1 pTM=0.0498 tol=0.587
2023-02-21 07:54:24,132 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:24,874 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.7 pTM=0.0501
2023-02-21 07:54:25,613 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=75.7 pTM=0.0509 tol=0.771
2023-02-21 07:54:26,353 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74 pTM=0.0505 tol=0.132
2023-02-21 07:54:27,093 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.9 pTM=0.0502 tol=0.0293
2023-02-21 07:54:27,093 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:27,834 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.2 pTM=0.0504
2023-02-21 07:54:28,573 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=74.8 pTM=0.0516 tol=0.265
2023-02-21 07:54:29,312 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.2 pTM=0.052 tol=0.0924
2023-02-21 07:54:30,053 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.1 pTM=0.0521 tol=0.0376
2023-02-21 07:54:30,053 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:30,795 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74 pTM=0.0501
2023-02-21 07:54:31,534 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=71.6 pTM=0.0511 tol=0.45
2023-02-21 07:54:32,273 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.1 pTM=0.0514 tol=1.73
2023-02-21 07:54:33,013 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.6 pTM=0.0512 tol=0.889
2023-02-21 07:54:33,013 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:33,014 reranking models by 'plddt' metric
2023-02-21 07:54:33,014 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=75.1 pTM=0.0521
2023-02-21 07:54:33,014 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=73.9 pTM=0.0502
2023-02-21 07:54:33,014 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=71.1 pTM=0.0498
2023-02-21 07:54:33,014 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=68.7 pTM=0.0536
2023-02-21 07:54:33,014 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=67.6 pTM=0.0512
2023-02-21 07:54:33,686 Query 14/80: 7m27 (length 8)
2023-02-21 07:54:35,522 Padding length to 14
2023-02-21 07:54:36,271 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.2 pTM=0.0538
2023-02-21 07:54:37,011 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.8 pTM=0.054 tol=0.129
2023-02-21 07:54:37,750 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=78.3 pTM=0.0539 tol=0.365
2023-02-21 07:54:38,489 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=71.3 pTM=0.0524 tol=0.336
2023-02-21 07:54:38,489 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:39,231 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81 pTM=0.0525
2023-02-21 07:54:39,971 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=80.7 pTM=0.0533 tol=0.281
2023-02-21 07:54:40,710 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81 pTM=0.0536 tol=0.0709
2023-02-21 07:54:41,450 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=80.3 pTM=0.0534 tol=0.0844
2023-02-21 07:54:41,451 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:42,196 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.6 pTM=0.0504
2023-02-21 07:54:42,936 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.2 pTM=0.051 tol=0.149
2023-02-21 07:54:43,675 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.9 pTM=0.0515 tol=0.0933
2023-02-21 07:54:44,415 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.3 pTM=0.0516 tol=0.0281
2023-02-21 07:54:44,415 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:45,156 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=78.4 pTM=0.0509
2023-02-21 07:54:45,895 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=82.1 pTM=0.0525 tol=0.13
2023-02-21 07:54:46,639 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=82.7 pTM=0.0526 tol=0.0471
2023-02-21 07:54:47,378 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=82.5 pTM=0.0526 tol=0.0101
2023-02-21 07:54:47,378 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:48,119 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=81.4 pTM=0.053
2023-02-21 07:54:48,859 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84.2 pTM=0.0547 tol=0.147
2023-02-21 07:54:49,598 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.7 pTM=0.0558 tol=0.106
2023-02-21 07:54:50,337 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87.1 pTM=0.0559 tol=0.0191
2023-02-21 07:54:50,338 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:50,339 reranking models by 'plddt' metric
2023-02-21 07:54:50,339 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=87.1 pTM=0.0559
2023-02-21 07:54:50,339 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=83.3 pTM=0.0516
2023-02-21 07:54:50,339 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=82.5 pTM=0.0526
2023-02-21 07:54:50,339 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=80.3 pTM=0.0534
2023-02-21 07:54:50,339 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=71.3 pTM=0.0524
2023-02-21 07:54:51,183 Query 15/80: 7m29 (length 8)
2023-02-21 07:54:53,037 Padding length to 14
2023-02-21 07:54:53,796 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73 pTM=0.0514
2023-02-21 07:54:54,535 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.0522 tol=0.691
2023-02-21 07:54:55,275 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=72.8 pTM=0.0522 tol=0.289
2023-02-21 07:54:56,014 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=72.7 pTM=0.0522 tol=0.0396
2023-02-21 07:54:56,014 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:56,756 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.2 pTM=0.0498
2023-02-21 07:54:57,496 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=71.2 pTM=0.0499 tol=0.35
2023-02-21 07:54:58,236 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=73.9 pTM=0.05 tol=0.402
2023-02-21 07:54:58,976 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=71.5 pTM=0.05 tol=0.404
2023-02-21 07:54:58,976 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:54:59,717 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.2 pTM=0.0476
2023-02-21 07:55:00,457 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=74.4 pTM=0.0482 tol=0.132
2023-02-21 07:55:01,197 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=73.7 pTM=0.0482 tol=0.161
2023-02-21 07:55:01,936 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.2 pTM=0.0482 tol=0.191
2023-02-21 07:55:01,937 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:02,678 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.2 pTM=0.0486
2023-02-21 07:55:03,418 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=70 pTM=0.0493 tol=0.163
2023-02-21 07:55:04,157 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=68.4 pTM=0.0493 tol=0.201
2023-02-21 07:55:04,896 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=68.8 pTM=0.0493 tol=0.0521
2023-02-21 07:55:04,897 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:05,638 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=77.5 pTM=0.0512
2023-02-21 07:55:06,378 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.1 pTM=0.05 tol=0.424
2023-02-21 07:55:07,117 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.8 pTM=0.0497 tol=0.359
2023-02-21 07:55:07,857 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=75 pTM=0.0496 tol=0.0479
2023-02-21 07:55:07,857 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:07,858 reranking models by 'plddt' metric
2023-02-21 07:55:07,858 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=75 pTM=0.0496
2023-02-21 07:55:07,858 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=74.2 pTM=0.0482
2023-02-21 07:55:07,858 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=72.7 pTM=0.0522
2023-02-21 07:55:07,858 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=71.5 pTM=0.05
2023-02-21 07:55:07,858 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=68.8 pTM=0.0493
2023-02-21 07:55:08,547 Query 16/80: 2lws (length 12)
2023-02-21 07:55:10,532 Padding length to 14
2023-02-21 07:55:11,280 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87.1 pTM=0.0429
2023-02-21 07:55:12,020 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.2 pTM=0.0422 tol=0.117
2023-02-21 07:55:12,759 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.5 pTM=0.0424 tol=0.0461
2023-02-21 07:55:13,498 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.7 pTM=0.0425 tol=0.0107
2023-02-21 07:55:13,499 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:14,240 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0415
2023-02-21 07:55:14,980 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.2 pTM=0.0414 tol=0.166
2023-02-21 07:55:15,719 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.1 pTM=0.0415 tol=0.0409
2023-02-21 07:55:16,459 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=83.8 pTM=0.0418 tol=0.0186
2023-02-21 07:55:16,460 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:17,201 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.4 pTM=0.0436
2023-02-21 07:55:17,941 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.2 pTM=0.0427 tol=0.112
2023-02-21 07:55:18,680 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=86.2 pTM=0.0427 tol=0.0455
2023-02-21 07:55:19,420 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=85.8 pTM=0.0426 tol=0.0229
2023-02-21 07:55:19,420 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:20,162 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.1 pTM=0.0427
2023-02-21 07:55:20,902 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90 pTM=0.0439 tol=0.0977
2023-02-21 07:55:21,641 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.4 pTM=0.045 tol=0.0367
2023-02-21 07:55:22,381 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.3 pTM=0.0451 tol=0.0109
2023-02-21 07:55:22,381 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:23,123 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.4 pTM=0.0436
2023-02-21 07:55:23,863 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=88.4 pTM=0.0427 tol=0.0898
2023-02-21 07:55:24,602 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.4 pTM=0.0433 tol=0.0447
2023-02-21 07:55:25,341 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.4 pTM=0.0435 tol=0.0139
2023-02-21 07:55:25,341 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:25,343 reranking models by 'plddt' metric
2023-02-21 07:55:25,343 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=91.3 pTM=0.0451
2023-02-21 07:55:25,343 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=89.4 pTM=0.0435
2023-02-21 07:55:25,343 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=86.7 pTM=0.0425
2023-02-21 07:55:25,343 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=85.8 pTM=0.0426
2023-02-21 07:55:25,343 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=83.8 pTM=0.0418
2023-02-21 07:55:26,025 Query 17/80: 2ndm (length 13)
2023-02-21 07:55:27,884 Padding length to 14
2023-02-21 07:55:28,635 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.5 pTM=0.0361
2023-02-21 07:55:29,374 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.6 pTM=0.0364 tol=0.098
2023-02-21 07:55:30,113 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.1 pTM=0.0367 tol=0.0567
2023-02-21 07:55:30,853 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=80.4 pTM=0.0371 tol=0.049
2023-02-21 07:55:30,853 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:31,595 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.7 pTM=0.0346
2023-02-21 07:55:32,335 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.2 pTM=0.0336 tol=0.319
2023-02-21 07:55:33,074 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=68.6 pTM=0.0335 tol=0.125
2023-02-21 07:55:33,814 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=69 pTM=0.0336 tol=0.04
2023-02-21 07:55:33,814 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:34,556 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=74.7 pTM=0.0336
2023-02-21 07:55:35,296 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=77.9 pTM=0.0345 tol=0.498
2023-02-21 07:55:36,035 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=81 pTM=0.0354 tol=0.175
2023-02-21 07:55:36,775 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=82.4 pTM=0.0356 tol=0.107
2023-02-21 07:55:36,775 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:37,516 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.5 pTM=0.0328
2023-02-21 07:55:38,257 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=81.3 pTM=0.0348 tol=0.559
2023-02-21 07:55:38,996 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.1 pTM=0.0383 tol=0.268
2023-02-21 07:55:39,736 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.4 pTM=0.0412 tol=0.12
2023-02-21 07:55:39,737 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:40,478 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.4 pTM=0.0336
2023-02-21 07:55:41,217 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.4 pTM=0.0341 tol=0.372
2023-02-21 07:55:41,956 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.8 pTM=0.0344 tol=0.177
2023-02-21 07:55:42,695 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=75.1 pTM=0.0345 tol=0.0433
2023-02-21 07:55:42,695 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:42,697 reranking models by 'plddt' metric
2023-02-21 07:55:42,697 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=90.4 pTM=0.0412
2023-02-21 07:55:42,697 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=82.4 pTM=0.0356
2023-02-21 07:55:42,697 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=80.4 pTM=0.0371
2023-02-21 07:55:42,697 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=75.1 pTM=0.0345
2023-02-21 07:55:42,697 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=69 pTM=0.0336
2023-02-21 07:55:43,495 Query 18/80: 1jbl (length 14)
2023-02-21 07:55:46,131 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.2 pTM=0.0421
2023-02-21 07:55:46,870 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.2 pTM=0.0423 tol=0.0873
2023-02-21 07:55:47,609 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.0427 tol=0.0494
2023-02-21 07:55:48,348 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.7 pTM=0.0428 tol=0.0195
2023-02-21 07:55:48,348 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:49,094 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.3 pTM=0.0428
2023-02-21 07:55:49,834 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93 pTM=0.043 tol=0.109
2023-02-21 07:55:50,574 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.0432 tol=0.0538
2023-02-21 07:55:51,314 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94 pTM=0.0435 tol=0.0294
2023-02-21 07:55:51,314 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:52,056 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94 pTM=0.043
2023-02-21 07:55:52,796 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.5 pTM=0.0447 tol=0.139
2023-02-21 07:55:53,535 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.1 pTM=0.0452 tol=0.0474
2023-02-21 07:55:54,275 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95 pTM=0.0453 tol=0.0222
2023-02-21 07:55:54,275 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:55,016 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.1 pTM=0.0429
2023-02-21 07:55:55,756 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0439 tol=0.0905
2023-02-21 07:55:56,495 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.7 pTM=0.0443 tol=0.0507
2023-02-21 07:55:57,235 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.0446 tol=0.0219
2023-02-21 07:55:57,235 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:55:57,977 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95 pTM=0.0439
2023-02-21 07:55:58,716 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.6 pTM=0.045 tol=0.117
2023-02-21 07:55:59,456 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96 pTM=0.0457 tol=0.0414
2023-02-21 07:56:00,195 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.1 pTM=0.0457 tol=0.0161
2023-02-21 07:56:00,195 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:00,197 reranking models by 'plddt' metric
2023-02-21 07:56:00,197 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.1 pTM=0.0457
2023-02-21 07:56:00,197 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.0446
2023-02-21 07:56:00,197 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95 pTM=0.0453
2023-02-21 07:56:00,197 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94 pTM=0.0435
2023-02-21 07:56:00,197 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.7 pTM=0.0428
2023-02-21 07:56:00,854 Query 19/80: 2ns4 (length 14)
2023-02-21 07:56:03,420 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=59.1 pTM=0.0282
2023-02-21 07:56:04,159 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=57.5 pTM=0.028 tol=0.6
2023-02-21 07:56:04,898 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=57.3 pTM=0.0284 tol=0.837
2023-02-21 07:56:05,638 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=57.4 pTM=0.0278 tol=0.351
2023-02-21 07:56:05,638 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:06,380 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=60.7 pTM=0.0282
2023-02-21 07:56:07,121 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=63.6 pTM=0.0291 tol=0.972
2023-02-21 07:56:07,860 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=63.9 pTM=0.0289 tol=0.154
2023-02-21 07:56:08,600 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=64.5 pTM=0.0291 tol=0.0462
2023-02-21 07:56:08,600 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:09,341 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=64.4 pTM=0.0271
2023-02-21 07:56:10,081 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=64.7 pTM=0.0272 tol=0.519
2023-02-21 07:56:10,819 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=64.8 pTM=0.0274 tol=0.166
2023-02-21 07:56:11,559 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=64.5 pTM=0.0274 tol=0.0809
2023-02-21 07:56:11,559 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:12,300 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=64.8 pTM=0.0278
2023-02-21 07:56:13,040 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.3 pTM=0.0281 tol=0.577
2023-02-21 07:56:13,779 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=63.4 pTM=0.028 tol=0.171
2023-02-21 07:56:14,519 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=65.8 pTM=0.0284 tol=1.33
2023-02-21 07:56:14,519 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:15,260 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=63.2 pTM=0.027
2023-02-21 07:56:16,000 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.7 pTM=0.0297 tol=1.12
2023-02-21 07:56:16,739 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.7 pTM=0.0321 tol=0.107
2023-02-21 07:56:17,479 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=83.8 pTM=0.0332 tol=0.0463
2023-02-21 07:56:17,479 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:17,480 reranking models by 'plddt' metric
2023-02-21 07:56:17,481 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=83.8 pTM=0.0332
2023-02-21 07:56:17,481 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=65.8 pTM=0.0284
2023-02-21 07:56:17,481 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=64.5 pTM=0.0274
2023-02-21 07:56:17,481 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=64.5 pTM=0.0291
2023-02-21 07:56:17,481 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=57.4 pTM=0.0278
2023-02-21 07:56:18,296 Query 20/80: 6u7q (length 14)
2023-02-21 07:56:20,907 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.8 pTM=0.0417
2023-02-21 07:56:21,647 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.9 pTM=0.0419 tol=0.0763
2023-02-21 07:56:22,387 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.1 pTM=0.0422 tol=0.0452
2023-02-21 07:56:23,127 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.3 pTM=0.0424 tol=0.0225
2023-02-21 07:56:23,127 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:23,869 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.1 pTM=0.0418
2023-02-21 07:56:24,613 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.7 pTM=0.0418 tol=0.106
2023-02-21 07:56:25,353 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93 pTM=0.0422 tol=0.0681
2023-02-21 07:56:26,093 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.2 pTM=0.0424 tol=0.0395
2023-02-21 07:56:26,093 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:26,835 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.6 pTM=0.0399
2023-02-21 07:56:27,575 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.0421 tol=0.11
2023-02-21 07:56:28,314 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.8 pTM=0.0428 tol=0.0393
2023-02-21 07:56:29,054 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.0429 tol=0.0133
2023-02-21 07:56:29,054 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:29,796 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.7 pTM=0.0416
2023-02-21 07:56:30,536 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0433 tol=0.115
2023-02-21 07:56:31,276 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.8 pTM=0.044 tol=0.0629
2023-02-21 07:56:32,016 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96 pTM=0.0441 tol=0.0252
2023-02-21 07:56:32,016 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:32,757 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.4 pTM=0.0409
2023-02-21 07:56:33,497 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.6 pTM=0.0429 tol=0.188
2023-02-21 07:56:34,236 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.1 pTM=0.0442 tol=0.0536
2023-02-21 07:56:34,976 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.2 pTM=0.0444 tol=0.0177
2023-02-21 07:56:34,976 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:34,978 reranking models by 'plddt' metric
2023-02-21 07:56:34,978 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.2 pTM=0.0444
2023-02-21 07:56:34,978 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=96 pTM=0.0441
2023-02-21 07:56:34,978 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.0429
2023-02-21 07:56:34,978 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.2 pTM=0.0424
2023-02-21 07:56:34,978 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.3 pTM=0.0424
2023-02-21 07:56:35,644 Query 21/80: 6u7r (length 14)
2023-02-21 07:56:38,392 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0439
2023-02-21 07:56:39,138 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.6 pTM=0.0443 tol=0.073
2023-02-21 07:56:39,877 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.8 pTM=0.0444 tol=0.0235
2023-02-21 07:56:40,616 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.8 pTM=0.0445 tol=0.0236
2023-02-21 07:56:40,616 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:41,358 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93 pTM=0.0445
2023-02-21 07:56:42,098 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.2 pTM=0.0465 tol=0.106
2023-02-21 07:56:42,838 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.4 pTM=0.0467 tol=0.0453
2023-02-21 07:56:43,578 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.6 pTM=0.0467 tol=0.0227
2023-02-21 07:56:43,578 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:44,319 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.6 pTM=0.0453
2023-02-21 07:56:45,059 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.0464 tol=0.0487
2023-02-21 07:56:45,798 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.5 pTM=0.0465 tol=0.0174
2023-02-21 07:56:46,538 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.4 pTM=0.0465 tol=0.0118
2023-02-21 07:56:46,538 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:47,279 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.6 pTM=0.046
2023-02-21 07:56:48,019 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.1 pTM=0.0469 tol=0.0524
2023-02-21 07:56:48,759 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.1 pTM=0.0469 tol=0.0284
2023-02-21 07:56:49,498 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.1 pTM=0.047 tol=0.00873
2023-02-21 07:56:49,499 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:50,240 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.7 pTM=0.0439
2023-02-21 07:56:50,980 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.3 pTM=0.0447 tol=0.0473
2023-02-21 07:56:51,719 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.5 pTM=0.045 tol=0.0255
2023-02-21 07:56:52,458 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.0451 tol=0.0232
2023-02-21 07:56:52,459 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:52,460 reranking models by 'plddt' metric
2023-02-21 07:56:52,460 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.1 pTM=0.047
2023-02-21 07:56:52,460 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.0451
2023-02-21 07:56:52,460 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=95.4 pTM=0.0465
2023-02-21 07:56:52,460 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.6 pTM=0.0467
2023-02-21 07:56:52,460 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=93.8 pTM=0.0445
2023-02-21 07:56:53,158 Query 22/80: 6u7s (length 14)
2023-02-21 07:56:55,751 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.9 pTM=0.0423
2023-02-21 07:56:56,491 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.2 pTM=0.0419 tol=0.0683
2023-02-21 07:56:57,230 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.2 pTM=0.0421 tol=0.0201
2023-02-21 07:56:57,969 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.3 pTM=0.0422 tol=0.00838
2023-02-21 07:56:57,969 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 07:56:58,716 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0439
2023-02-21 07:56:59,456 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.2 pTM=0.0442 tol=0.0786
2023-02-21 07:57:00,196 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.3 pTM=0.0443 tol=0.0227
2023-02-21 07:57:00,937 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.3 pTM=0.0443 tol=0.0133
2023-02-21 07:57:00,937 alphafold2_ptm_model_2_seed_000 took 3.0s (3 recycles)
2023-02-21 07:57:01,679 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.2 pTM=0.0447
2023-02-21 07:57:02,419 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.2 pTM=0.0441 tol=0.124
2023-02-21 07:57:03,158 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.1 pTM=0.0439 tol=0.0312
2023-02-21 07:57:03,898 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.9 pTM=0.0436 tol=0.0257
2023-02-21 07:57:03,898 alphafold2_ptm_model_3_seed_000 took 3.0s (3 recycles)
2023-02-21 07:57:04,639 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.4 pTM=0.0447
2023-02-21 07:57:05,379 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.045 tol=0.0751
2023-02-21 07:57:06,118 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.6 pTM=0.0454 tol=0.012
2023-02-21 07:57:06,858 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.6 pTM=0.0454 tol=0.0143
2023-02-21 07:57:06,858 alphafold2_ptm_model_4_seed_000 took 3.0s (3 recycles)
2023-02-21 07:57:07,599 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95.1 pTM=0.0447
2023-02-21 07:57:08,339 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.5 pTM=0.0446 tol=0.076
2023-02-21 07:57:09,078 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.5 pTM=0.0445 tol=0.0215
2023-02-21 07:57:09,818 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.0444 tol=0.00967
2023-02-21 07:57:09,818 alphafold2_ptm_model_5_seed_000 took 3.0s (3 recycles)
2023-02-21 07:57:09,820 reranking models by 'plddt' metric
2023-02-21 07:57:09,820 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.6 pTM=0.0454
2023-02-21 07:57:09,820 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.0444
2023-02-21 07:57:09,820 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.9 pTM=0.0436
2023-02-21 07:57:09,820 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.3 pTM=0.0443
2023-02-21 07:57:09,820 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.3 pTM=0.0422
2023-02-21 07:57:10,622 Query 23/80: 2lwu (length 15)
2023-02-21 07:57:12,471 Padding length to 25
2023-02-21 07:57:20,834 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=95.1 pTM=0.0431
2023-02-21 07:57:21,772 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=95.2 pTM=0.0433 tol=0.0887
2023-02-21 07:57:22,710 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=95.1 pTM=0.043 tol=0.0313
2023-02-21 07:57:23,648 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=95 pTM=0.043 tol=0.0173
2023-02-21 07:57:23,648 alphafold2_ptm_model_1_seed_000 took 11.2s (3 recycles)
2023-02-21 07:57:24,591 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=95.4 pTM=0.0436
2023-02-21 07:57:25,531 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=95.6 pTM=0.045 tol=0.0492
2023-02-21 07:57:26,470 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.6 pTM=0.0448 tol=0.028
2023-02-21 07:57:27,410 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.7 pTM=0.0448 tol=0.015
2023-02-21 07:57:27,410 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:28,352 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=96.1 pTM=0.0432
2023-02-21 07:57:29,291 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=96.4 pTM=0.0443 tol=0.0605
2023-02-21 07:57:30,230 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.5 pTM=0.0444 tol=0.0377
2023-02-21 07:57:31,170 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.5 pTM=0.0443 tol=0.0112
2023-02-21 07:57:31,170 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:32,111 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=97 pTM=0.0462
2023-02-21 07:57:33,050 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=97.1 pTM=0.0467 tol=0.0392
2023-02-21 07:57:33,987 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=97.1 pTM=0.0466 tol=0.0206
2023-02-21 07:57:34,926 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=97.1 pTM=0.0465 tol=0.00798
2023-02-21 07:57:34,926 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:35,867 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=97.1 pTM=0.0457
2023-02-21 07:57:36,807 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=97.2 pTM=0.0467 tol=0.0522
2023-02-21 07:57:37,746 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=97.2 pTM=0.0467 tol=0.0168
2023-02-21 07:57:38,685 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=97.2 pTM=0.0467 tol=0.00705
2023-02-21 07:57:38,685 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:38,687 reranking models by 'plddt' metric
2023-02-21 07:57:38,687 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=97.2 pTM=0.0467
2023-02-21 07:57:38,687 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=97.1 pTM=0.0465
2023-02-21 07:57:38,687 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=96.5 pTM=0.0443
2023-02-21 07:57:38,687 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.7 pTM=0.0448
2023-02-21 07:57:38,687 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=95 pTM=0.043
2023-02-21 07:57:39,368 Query 24/80: 2ndl (length 16)
2023-02-21 07:57:41,235 Padding length to 25
2023-02-21 07:57:42,185 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.8 pTM=0.0357
2023-02-21 07:57:43,123 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.3 pTM=0.0343 tol=0.16
2023-02-21 07:57:44,061 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.8 pTM=0.034 tol=0.0305
2023-02-21 07:57:44,999 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.7 pTM=0.0339 tol=0.0141
2023-02-21 07:57:44,999 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:45,945 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.5 pTM=0.0368
2023-02-21 07:57:46,884 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.4 pTM=0.0362 tol=0.105
2023-02-21 07:57:47,823 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.9 pTM=0.036 tol=0.046
2023-02-21 07:57:48,764 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.8 pTM=0.036 tol=0.021
2023-02-21 07:57:48,764 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:49,706 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.0357
2023-02-21 07:57:50,645 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.1 pTM=0.0349 tol=0.135
2023-02-21 07:57:51,584 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.6 pTM=0.035 tol=0.0536
2023-02-21 07:57:52,523 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89.1 pTM=0.0347 tol=0.0349
2023-02-21 07:57:52,524 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:53,464 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.9 pTM=0.0357
2023-02-21 07:57:54,403 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.8 pTM=0.0361 tol=0.121
2023-02-21 07:57:55,341 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.8 pTM=0.0364 tol=0.0387
2023-02-21 07:57:56,280 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.6 pTM=0.0364 tol=0.0205
2023-02-21 07:57:56,280 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 07:57:57,221 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.5 pTM=0.0394
2023-02-21 07:57:58,161 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94 pTM=0.0389 tol=0.114
2023-02-21 07:57:59,100 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.5 pTM=0.0396 tol=0.0299
2023-02-21 07:58:00,039 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.6 pTM=0.0397 tol=0.0148
2023-02-21 07:58:00,039 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:00,041 reranking models by 'plddt' metric
2023-02-21 07:58:00,041 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.6 pTM=0.0397
2023-02-21 07:58:00,041 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.6 pTM=0.0364
2023-02-21 07:58:00,041 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=89.8 pTM=0.036
2023-02-21 07:58:00,042 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=89.1 pTM=0.0347
2023-02-21 07:58:00,042 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.7 pTM=0.0339
2023-02-21 07:58:00,831 Query 25/80: 2ndn (length 16)
2023-02-21 07:58:01,488 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 07:58:09,353 Padding length to 25
2023-02-21 07:58:10,309 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.5 pTM=0.0381
2023-02-21 07:58:11,247 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.1 pTM=0.0375 tol=0.0627
2023-02-21 07:58:12,184 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.4 pTM=0.0378 tol=0.0178
2023-02-21 07:58:13,175 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.5 pTM=0.038 tol=0.00741
2023-02-21 07:58:13,176 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:14,118 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.2 pTM=0.0393
2023-02-21 07:58:15,058 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.8 pTM=0.038 tol=0.0569
2023-02-21 07:58:15,998 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.7 pTM=0.038 tol=0.0148
2023-02-21 07:58:16,938 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.8 pTM=0.0381 tol=0.0127
2023-02-21 07:58:16,938 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:17,879 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.6 pTM=0.0367
2023-02-21 07:58:18,819 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.4 pTM=0.0369 tol=0.0578
2023-02-21 07:58:19,758 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.7 pTM=0.0374 tol=0.0176
2023-02-21 07:58:20,697 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.8 pTM=0.0376 tol=0.0099
2023-02-21 07:58:20,697 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:21,638 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.1 pTM=0.0383
2023-02-21 07:58:22,576 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.2 pTM=0.0386 tol=0.0441
2023-02-21 07:58:23,515 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.4 pTM=0.0392 tol=0.0271
2023-02-21 07:58:24,453 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.7 pTM=0.0396 tol=0.0199
2023-02-21 07:58:24,453 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:25,395 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=96.1 pTM=0.0388
2023-02-21 07:58:26,334 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.2 pTM=0.0395 tol=0.0911
2023-02-21 07:58:27,273 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.4 pTM=0.0398 tol=0.0163
2023-02-21 07:58:28,212 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.5 pTM=0.04 tol=0.0105
2023-02-21 07:58:28,213 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 07:58:28,215 reranking models by 'plddt' metric
2023-02-21 07:58:28,215 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.5 pTM=0.04
2023-02-21 07:58:28,215 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.7 pTM=0.0396
2023-02-21 07:58:28,215 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=94.8 pTM=0.0376
2023-02-21 07:58:28,215 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.8 pTM=0.0381
2023-02-21 07:58:28,215 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=93.5 pTM=0.038
2023-02-21 07:58:28,870 Query 26/80: 5h1h (length 16)
2023-02-21 07:58:29,468 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 07:58:36,077 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 07:58:46,687 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 07:58:54,298 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 07:58:59,902 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 07:59:07,515 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 07:59:16,126 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 07:59:26,747 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 07:59:35,357 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 07:59:43,367 Padding length to 25
2023-02-21 07:59:44,334 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.0338
2023-02-21 07:59:45,269 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=81.4 pTM=0.0329 tol=0.242
2023-02-21 07:59:46,206 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=78.9 pTM=0.032 tol=0.0768
2023-02-21 07:59:47,144 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=76.9 pTM=0.0314 tol=0.0803
2023-02-21 07:59:47,144 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 07:59:48,086 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.1 pTM=0.0354
2023-02-21 07:59:49,026 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.3 pTM=0.0331 tol=0.127
2023-02-21 07:59:49,965 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=79.9 pTM=0.0312 tol=0.133
2023-02-21 07:59:50,905 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.6 pTM=0.0301 tol=0.103
2023-02-21 07:59:50,905 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 07:59:51,848 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.8 pTM=0.0341
2023-02-21 07:59:52,787 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.5 pTM=0.0358 tol=0.122
2023-02-21 07:59:53,726 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.8 pTM=0.0367 tol=0.0244
2023-02-21 07:59:54,666 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.1 pTM=0.037 tol=0.0161
2023-02-21 07:59:54,666 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 07:59:55,611 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.8 pTM=0.0355
2023-02-21 07:59:56,550 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.9 pTM=0.0368 tol=0.0816
2023-02-21 07:59:57,488 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.8 pTM=0.0375 tol=0.0524
2023-02-21 07:59:58,427 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.1 pTM=0.0378 tol=0.011
2023-02-21 07:59:58,427 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 07:59:59,369 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.9 pTM=0.0353
2023-02-21 08:00:00,309 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.2 pTM=0.0369 tol=0.0586
2023-02-21 08:00:01,247 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.2 pTM=0.038 tol=0.0373
2023-02-21 08:00:02,186 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.7 pTM=0.0385 tol=0.0194
2023-02-21 08:00:02,187 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:00:02,189 reranking models by 'plddt' metric
2023-02-21 08:00:02,189 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.7 pTM=0.0385
2023-02-21 08:00:02,189 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=94.1 pTM=0.0378
2023-02-21 08:00:02,189 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.1 pTM=0.037
2023-02-21 08:00:02,189 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=76.9 pTM=0.0314
2023-02-21 08:00:02,189 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=76.6 pTM=0.0301
2023-02-21 08:00:02,857 Query 27/80: 2lwv (length 17)
2023-02-21 08:00:03,453 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:00:09,060 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:00:14,679 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:00:21,274 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:00:31,887 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:00:37,483 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:00:44,089 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:00:49,824 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:00:58,441 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:01:07,309 Padding length to 25
2023-02-21 08:01:08,275 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.6 pTM=0.0363
2023-02-21 08:01:09,207 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.6 pTM=0.0369 tol=0.108
2023-02-21 08:01:10,139 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.037 tol=0.0236
2023-02-21 08:01:11,077 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90 pTM=0.037 tol=0.0139
2023-02-21 08:01:11,077 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:01:12,018 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.7 pTM=0.037
2023-02-21 08:01:12,958 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.8 pTM=0.0372 tol=0.151
2023-02-21 08:01:13,897 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89 pTM=0.037 tol=0.0978
2023-02-21 08:01:14,838 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.2 pTM=0.0371 tol=0.0261
2023-02-21 08:01:14,838 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:01:15,780 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.9 pTM=0.0367
2023-02-21 08:01:16,719 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.5 pTM=0.0364 tol=0.0986
2023-02-21 08:01:17,659 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.7 pTM=0.0365 tol=0.0626
2023-02-21 08:01:18,602 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89.6 pTM=0.0364 tol=0.0227
2023-02-21 08:01:18,602 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:01:19,544 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.1 pTM=0.0373
2023-02-21 08:01:20,482 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.6 pTM=0.0376 tol=0.141
2023-02-21 08:01:21,420 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.8 pTM=0.0379 tol=0.0274
2023-02-21 08:01:22,359 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.9 pTM=0.0379 tol=0.0119
2023-02-21 08:01:22,359 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:01:23,301 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.8 pTM=0.0367
2023-02-21 08:01:24,241 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.6 pTM=0.037 tol=0.0756
2023-02-21 08:01:25,184 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.6 pTM=0.0374 tol=0.025
2023-02-21 08:01:26,123 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.7 pTM=0.0375 tol=0.0157
2023-02-21 08:01:26,123 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:01:26,125 reranking models by 'plddt' metric
2023-02-21 08:01:26,126 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=91.7 pTM=0.0375
2023-02-21 08:01:26,126 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.9 pTM=0.0379
2023-02-21 08:01:26,126 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=90 pTM=0.037
2023-02-21 08:01:26,126 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=89.6 pTM=0.0364
2023-02-21 08:01:26,126 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=89.2 pTM=0.0371
2023-02-21 08:01:26,951 Query 28/80: 2nb5 (length 17)
2023-02-21 08:01:27,569 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:01:38,193 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:01:43,810 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:01:49,412 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:01:57,029 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:02:03,629 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:02:10,241 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:02:20,864 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:02:31,467 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:02:40,322 Padding length to 25
2023-02-21 08:02:41,283 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.3 pTM=0.0342
2023-02-21 08:02:42,215 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.2 pTM=0.0334 tol=0.137
2023-02-21 08:02:43,146 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.3 pTM=0.0331 tol=0.0594
2023-02-21 08:02:44,078 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.5 pTM=0.0329 tol=0.0755
2023-02-21 08:02:44,078 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:02:45,014 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88 pTM=0.0349
2023-02-21 08:02:45,947 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.4 pTM=0.0317 tol=0.38
2023-02-21 08:02:46,880 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.7 pTM=0.0334 tol=0.871
2023-02-21 08:02:47,814 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.1 pTM=0.0355 tol=0.116
2023-02-21 08:02:47,814 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:02:48,749 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.9 pTM=0.0334
2023-02-21 08:02:49,682 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.8 pTM=0.0328 tol=0.124
2023-02-21 08:02:50,615 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.9 pTM=0.0324 tol=0.0395
2023-02-21 08:02:51,547 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=87.5 pTM=0.0322 tol=0.0219
2023-02-21 08:02:51,548 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:02:52,482 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.7 pTM=0.0341
2023-02-21 08:02:53,414 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.2 pTM=0.0323 tol=0.252
2023-02-21 08:02:54,346 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=82.7 pTM=0.0324 tol=0.58
2023-02-21 08:02:55,278 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=87.2 pTM=0.0339 tol=0.36
2023-02-21 08:02:55,278 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:02:56,213 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.8 pTM=0.0344
2023-02-21 08:02:57,146 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=85.1 pTM=0.0326 tol=0.129
2023-02-21 08:02:58,082 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=82.9 pTM=0.0323 tol=0.117
2023-02-21 08:02:59,015 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=81.6 pTM=0.0323 tol=0.224
2023-02-21 08:02:59,015 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:02:59,017 reranking models by 'plddt' metric
2023-02-21 08:02:59,017 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=90.1 pTM=0.0355
2023-02-21 08:02:59,017 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=87.5 pTM=0.0322
2023-02-21 08:02:59,017 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=87.2 pTM=0.0339
2023-02-21 08:02:59,017 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=83.5 pTM=0.0329
2023-02-21 08:02:59,017 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=81.6 pTM=0.0323
2023-02-21 08:02:59,691 Query 29/80: 1hvz (length 18)
2023-02-21 08:03:00,288 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:03:10,910 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:03:19,503 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:03:28,102 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:03:34,707 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:03:43,303 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:03:50,919 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:03:57,536 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:04:07,407 Padding length to 25
2023-02-21 08:04:08,371 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.2 pTM=0.0366
2023-02-21 08:04:09,303 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0366 tol=0.084
2023-02-21 08:04:10,234 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.1 pTM=0.037 tol=0.0444
2023-02-21 08:04:11,166 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.1 pTM=0.0372 tol=0.0175
2023-02-21 08:04:11,166 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:04:12,102 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0362
2023-02-21 08:04:13,035 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.1 pTM=0.0361 tol=0.238
2023-02-21 08:04:13,968 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.3 pTM=0.0364 tol=0.121
2023-02-21 08:04:14,902 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.4 pTM=0.0366 tol=0.0854
2023-02-21 08:04:14,902 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:04:15,837 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.0363
2023-02-21 08:04:16,771 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.6 pTM=0.0363 tol=0.0853
2023-02-21 08:04:17,704 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.9 pTM=0.0367 tol=0.0326
2023-02-21 08:04:18,637 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.9 pTM=0.0367 tol=0.0307
2023-02-21 08:04:18,637 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:04:19,572 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.4 pTM=0.037
2023-02-21 08:04:20,505 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.2 pTM=0.0374 tol=0.102
2023-02-21 08:04:21,438 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.4 pTM=0.0381 tol=0.0565
2023-02-21 08:04:22,377 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.4 pTM=0.0383 tol=0.0339
2023-02-21 08:04:22,377 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:04:23,314 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.0359
2023-02-21 08:04:24,247 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.7 pTM=0.0352 tol=0.0967
2023-02-21 08:04:25,179 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0356 tol=0.0358
2023-02-21 08:04:26,113 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.9 pTM=0.0356 tol=0.0138
2023-02-21 08:04:26,113 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:04:26,115 reranking models by 'plddt' metric
2023-02-21 08:04:26,115 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.4 pTM=0.0383
2023-02-21 08:04:26,115 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.9 pTM=0.0367
2023-02-21 08:04:26,115 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=94.4 pTM=0.0366
2023-02-21 08:04:26,115 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.1 pTM=0.0372
2023-02-21 08:04:26,115 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=93.9 pTM=0.0356
2023-02-21 08:04:26,941 Query 30/80: 2atg (length 18)
2023-02-21 08:04:27,540 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:04:35,136 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:04:41,752 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:04:51,360 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:04:59,982 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:05:05,594 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:05:16,203 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:05:21,818 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:05:27,425 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:05:34,038 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:05:42,653 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:05:51,274 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:06:01,882 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:06:07,493 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:06:17,092 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:06:24,686 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:06:31,299 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:06:40,911 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:06:50,523 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:06:57,124 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:07:03,727 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:07:13,589 Padding length to 25
2023-02-21 08:07:14,553 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.1 pTM=0.0338
2023-02-21 08:07:15,485 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.2 pTM=0.0356 tol=0.222
2023-02-21 08:07:16,417 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.9 pTM=0.0361 tol=0.0497
2023-02-21 08:07:17,348 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.1 pTM=0.0363 tol=0.0242
2023-02-21 08:07:17,348 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:07:18,285 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.4 pTM=0.032
2023-02-21 08:07:19,219 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.7 pTM=0.0352 tol=0.249
2023-02-21 08:07:20,153 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.7 pTM=0.0356 tol=0.103
2023-02-21 08:07:21,086 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.9 pTM=0.0357 tol=0.0693
2023-02-21 08:07:21,087 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:07:22,022 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0365
2023-02-21 08:07:22,956 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.9 pTM=0.037 tol=0.0695
2023-02-21 08:07:23,889 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.3 pTM=0.0373 tol=0.0375
2023-02-21 08:07:24,826 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.0373 tol=0.0193
2023-02-21 08:07:24,826 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:07:25,760 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.3 pTM=0.0362
2023-02-21 08:07:26,693 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0376 tol=0.161
2023-02-21 08:07:27,625 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96 pTM=0.0381 tol=0.0829
2023-02-21 08:07:28,558 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0384 tol=0.0479
2023-02-21 08:07:28,558 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:07:29,494 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.2 pTM=0.0338
2023-02-21 08:07:30,427 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.4 pTM=0.0343 tol=0.114
2023-02-21 08:07:31,359 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.5 pTM=0.0349 tol=0.0464
2023-02-21 08:07:32,292 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.9 pTM=0.0349 tol=0.0144
2023-02-21 08:07:32,292 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:07:32,295 reranking models by 'plddt' metric
2023-02-21 08:07:32,295 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0384
2023-02-21 08:07:32,295 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.0373
2023-02-21 08:07:32,295 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=93.1 pTM=0.0363
2023-02-21 08:07:32,295 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=92.9 pTM=0.0349
2023-02-21 08:07:32,295 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.9 pTM=0.0357
2023-02-21 08:07:32,974 Query 31/80: 2lwt (length 18)
2023-02-21 08:07:33,565 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:07:41,172 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:07:51,775 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:08:00,380 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:08:05,992 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:08:14,603 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:08:24,214 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:08:31,810 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:08:38,815 Padding length to 25
2023-02-21 08:08:39,777 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.5 pTM=0.0298
2023-02-21 08:08:40,713 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.9 pTM=0.0327 tol=0.188
2023-02-21 08:08:41,644 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.2 pTM=0.0334 tol=0.152
2023-02-21 08:08:42,575 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.9 pTM=0.0341 tol=0.0318
2023-02-21 08:08:42,576 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:08:43,515 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.8 pTM=0.0344
2023-02-21 08:08:44,448 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.4 pTM=0.0322 tol=0.269
2023-02-21 08:08:45,381 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=82.3 pTM=0.0314 tol=0.0528
2023-02-21 08:08:46,315 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.9 pTM=0.0315 tol=0.0227
2023-02-21 08:08:46,315 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:08:47,251 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.1 pTM=0.0331
2023-02-21 08:08:48,183 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.8 pTM=0.0347 tol=0.121
2023-02-21 08:08:49,116 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.6 pTM=0.0348 tol=0.0317
2023-02-21 08:08:50,053 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.5 pTM=0.0348 tol=0.0193
2023-02-21 08:08:50,053 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:08:50,989 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.2 pTM=0.0308
2023-02-21 08:08:51,921 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.4 pTM=0.0347 tol=1.13
2023-02-21 08:08:52,852 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.8 pTM=0.0356 tol=0.0677
2023-02-21 08:08:53,784 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93 pTM=0.0358 tol=0.022
2023-02-21 08:08:53,784 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:08:54,720 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.9 pTM=0.0341
2023-02-21 08:08:55,656 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.4 pTM=0.0359 tol=0.259
2023-02-21 08:08:56,589 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.4 pTM=0.037 tol=0.0513
2023-02-21 08:08:57,521 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.7 pTM=0.0372 tol=0.0163
2023-02-21 08:08:57,522 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:08:57,524 reranking models by 'plddt' metric
2023-02-21 08:08:57,524 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94.7 pTM=0.0372
2023-02-21 08:08:57,524 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=93 pTM=0.0358
2023-02-21 08:08:57,524 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=92.5 pTM=0.0348
2023-02-21 08:08:57,524 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.9 pTM=0.0341
2023-02-21 08:08:57,524 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=82.9 pTM=0.0315
2023-02-21 08:08:58,202 Query 32/80: 2lye (length 18)
2023-02-21 08:08:58,793 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:09:04,400 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:09:14,020 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:09:20,630 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:09:29,234 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:09:37,838 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:09:45,436 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:09:51,035 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:10:00,644 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:10:11,493 Padding length to 25
2023-02-21 08:10:12,461 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.6 pTM=0.0374
2023-02-21 08:10:13,393 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.6 pTM=0.0373 tol=0.0482
2023-02-21 08:10:14,324 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.6 pTM=0.0374 tol=0.0403
2023-02-21 08:10:15,255 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.6 pTM=0.0374 tol=0.0177
2023-02-21 08:10:15,256 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:10:16,192 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.9 pTM=0.037
2023-02-21 08:10:17,125 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.5 pTM=0.0362 tol=0.239
2023-02-21 08:10:18,060 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.4 pTM=0.0361 tol=0.168
2023-02-21 08:10:18,994 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.6 pTM=0.036 tol=0.146
2023-02-21 08:10:18,994 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:10:19,931 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.9 pTM=0.0365
2023-02-21 08:10:20,864 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=96.2 pTM=0.0364 tol=0.124
2023-02-21 08:10:21,796 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.1 pTM=0.0363 tol=0.0645
2023-02-21 08:10:22,729 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.1 pTM=0.0361 tol=0.0671
2023-02-21 08:10:22,729 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:10:23,664 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.9 pTM=0.0381
2023-02-21 08:10:24,596 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.7 pTM=0.0379 tol=0.1
2023-02-21 08:10:25,528 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.8 pTM=0.0382 tol=0.215
2023-02-21 08:10:26,460 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=97 pTM=0.0388 tol=0.116
2023-02-21 08:10:26,460 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:10:27,395 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95.4 pTM=0.0377
2023-02-21 08:10:28,328 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.2 pTM=0.037 tol=0.0837
2023-02-21 08:10:29,261 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.3 pTM=0.0374 tol=0.0244
2023-02-21 08:10:30,194 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.2 pTM=0.0374 tol=0.0117
2023-02-21 08:10:30,194 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:10:30,196 reranking models by 'plddt' metric
2023-02-21 08:10:30,196 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=97 pTM=0.0388
2023-02-21 08:10:30,196 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=96.1 pTM=0.0361
2023-02-21 08:10:30,196 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=95.2 pTM=0.0374
2023-02-21 08:10:30,196 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.6 pTM=0.036
2023-02-21 08:10:30,196 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.6 pTM=0.0374
2023-02-21 08:10:31,016 Query 33/80: 2lyf (length 18)
2023-02-21 08:10:31,619 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:10:37,229 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:10:47,846 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:10:56,464 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:11:07,077 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:11:14,674 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:11:21,281 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:11:28,879 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:11:37,719 Padding length to 25
2023-02-21 08:11:38,683 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.2 pTM=0.0366
2023-02-21 08:11:39,614 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.9 pTM=0.0366 tol=0.084
2023-02-21 08:11:40,545 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.1 pTM=0.037 tol=0.0444
2023-02-21 08:11:41,477 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.1 pTM=0.0372 tol=0.0175
2023-02-21 08:11:41,477 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:11:42,413 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.8 pTM=0.0362
2023-02-21 08:11:43,346 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.1 pTM=0.0361 tol=0.238
2023-02-21 08:11:44,279 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.3 pTM=0.0364 tol=0.121
2023-02-21 08:11:45,212 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.4 pTM=0.0366 tol=0.0854
2023-02-21 08:11:45,212 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:11:46,148 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.0363
2023-02-21 08:11:47,081 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.6 pTM=0.0363 tol=0.0853
2023-02-21 08:11:48,014 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.9 pTM=0.0367 tol=0.0326
2023-02-21 08:11:48,946 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.9 pTM=0.0367 tol=0.0307
2023-02-21 08:11:48,946 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:11:49,881 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.4 pTM=0.037
2023-02-21 08:11:50,813 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.2 pTM=0.0374 tol=0.102
2023-02-21 08:11:51,745 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.4 pTM=0.0381 tol=0.0565
2023-02-21 08:11:52,677 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.4 pTM=0.0383 tol=0.0339
2023-02-21 08:11:52,677 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:11:53,612 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.0359
2023-02-21 08:11:54,545 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.7 pTM=0.0352 tol=0.0967
2023-02-21 08:11:55,484 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0356 tol=0.0358
2023-02-21 08:11:56,423 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.9 pTM=0.0356 tol=0.0138
2023-02-21 08:11:56,424 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:11:56,426 reranking models by 'plddt' metric
2023-02-21 08:11:56,426 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.4 pTM=0.0383
2023-02-21 08:11:56,426 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.9 pTM=0.0367
2023-02-21 08:11:56,426 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=94.4 pTM=0.0366
2023-02-21 08:11:56,426 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.1 pTM=0.0372
2023-02-21 08:11:56,426 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=93.9 pTM=0.0356
2023-02-21 08:11:57,104 Query 34/80: 2lzi (length 18)
2023-02-21 08:11:57,715 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:12:03,330 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:12:12,946 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:12:22,541 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:12:28,126 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:12:36,730 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:12:42,334 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:12:50,935 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:13:01,543 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:13:10,364 Padding length to 25
2023-02-21 08:13:11,339 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.1 pTM=0.0345
2023-02-21 08:13:12,271 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.2 pTM=0.0358 tol=0.251
2023-02-21 08:13:13,201 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.8 pTM=0.0362 tol=0.0961
2023-02-21 08:13:14,132 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.1 pTM=0.0363 tol=0.0809
2023-02-21 08:13:14,133 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:13:15,068 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=57.7 pTM=0.0248
2023-02-21 08:13:16,001 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.7 pTM=0.0347 tol=1.72
2023-02-21 08:13:16,934 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.2 pTM=0.0353 tol=0.132
2023-02-21 08:13:17,867 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.0356 tol=0.0579
2023-02-21 08:13:17,867 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:13:18,809 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0364
2023-02-21 08:13:19,749 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.9 pTM=0.037 tol=0.0826
2023-02-21 08:13:20,688 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.3 pTM=0.0373 tol=0.0428
2023-02-21 08:13:21,628 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.0373 tol=0.0271
2023-02-21 08:13:21,628 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:13:22,569 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.5 pTM=0.0364
2023-02-21 08:13:23,507 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.4 pTM=0.0377 tol=0.158
2023-02-21 08:13:24,444 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96 pTM=0.0381 tol=0.0871
2023-02-21 08:13:25,383 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.2 pTM=0.0384 tol=0.0472
2023-02-21 08:13:25,383 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:13:26,325 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.3 pTM=0.0339
2023-02-21 08:13:27,265 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.4 pTM=0.0343 tol=0.113
2023-02-21 08:13:28,203 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.6 pTM=0.0349 tol=0.0421
2023-02-21 08:13:29,142 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.9 pTM=0.035 tol=0.0141
2023-02-21 08:13:29,142 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:13:29,145 reranking models by 'plddt' metric
2023-02-21 08:13:29,145 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.2 pTM=0.0384
2023-02-21 08:13:29,145 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.0373
2023-02-21 08:13:29,145 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=93.1 pTM=0.0363
2023-02-21 08:13:29,145 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=92.9 pTM=0.035
2023-02-21 08:13:29,145 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.0356
2023-02-21 08:13:29,976 Query 35/80: 2m77 (length 18)
2023-02-21 08:13:30,569 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:13:39,180 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:13:45,794 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:13:51,404 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:14:02,009 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:14:08,630 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:14:17,236 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:14:24,867 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:14:30,458 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:14:39,319 Padding length to 25
2023-02-21 08:14:40,306 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=94.5 pTM=0.0366
2023-02-21 08:14:41,238 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.1 pTM=0.0366 tol=0.103
2023-02-21 08:14:42,174 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.1 pTM=0.0369 tol=0.0607
2023-02-21 08:14:43,111 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.1 pTM=0.037 tol=0.0169
2023-02-21 08:14:43,112 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:14:44,053 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.4 pTM=0.0362
2023-02-21 08:14:44,992 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.9 pTM=0.0355 tol=0.207
2023-02-21 08:14:45,931 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.8 pTM=0.0361 tol=0.13
2023-02-21 08:14:46,869 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.8 pTM=0.0363 tol=0.0635
2023-02-21 08:14:46,869 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:14:47,810 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.3 pTM=0.036
2023-02-21 08:14:48,748 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.9 pTM=0.0357 tol=0.092
2023-02-21 08:14:49,686 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95 pTM=0.0361 tol=0.034
2023-02-21 08:14:50,625 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.1 pTM=0.0362 tol=0.0352
2023-02-21 08:14:50,625 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:14:51,566 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.8 pTM=0.0363
2023-02-21 08:14:52,504 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.6 pTM=0.0372 tol=0.113
2023-02-21 08:14:53,441 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.9 pTM=0.0377 tol=0.0391
2023-02-21 08:14:54,378 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.0378 tol=0.0154
2023-02-21 08:14:54,378 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:14:55,322 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.6 pTM=0.036
2023-02-21 08:14:56,261 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.6 pTM=0.0361 tol=0.0721
2023-02-21 08:14:57,199 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.8 pTM=0.0366 tol=0.0544
2023-02-21 08:14:58,137 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.9 pTM=0.0368 tol=0.0124
2023-02-21 08:14:58,138 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:14:58,140 reranking models by 'plddt' metric
2023-02-21 08:14:58,140 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.0378
2023-02-21 08:14:58,140 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.1 pTM=0.0362
2023-02-21 08:14:58,140 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=94.9 pTM=0.0368
2023-02-21 08:14:58,140 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=94.1 pTM=0.037
2023-02-21 08:14:58,140 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=93.8 pTM=0.0363
2023-02-21 08:14:58,820 Query 36/80: 2m78 (length 18)
2023-02-21 08:14:59,429 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:15:07,034 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:15:14,633 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:15:24,235 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:15:31,845 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:15:40,455 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:15:51,056 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:15:58,663 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:16:09,645 Padding length to 25
2023-02-21 08:16:10,612 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.2 pTM=0.0362
2023-02-21 08:16:11,545 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.5 pTM=0.0367 tol=0.11
2023-02-21 08:16:12,482 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.7 pTM=0.037 tol=0.0494
2023-02-21 08:16:13,418 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.6 pTM=0.0371 tol=0.014
2023-02-21 08:16:13,419 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:16:14,360 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.4 pTM=0.0356
2023-02-21 08:16:15,298 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.2 pTM=0.0356 tol=0.157
2023-02-21 08:16:16,237 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.4 pTM=0.0363 tol=0.0922
2023-02-21 08:16:17,176 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.4 pTM=0.0365 tol=0.0407
2023-02-21 08:16:17,176 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:16:18,117 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0356
2023-02-21 08:16:19,055 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.0357 tol=0.0646
2023-02-21 08:16:19,993 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.8 pTM=0.0361 tol=0.0339
2023-02-21 08:16:20,932 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.0362 tol=0.0611
2023-02-21 08:16:20,932 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:16:21,872 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.2 pTM=0.0363
2023-02-21 08:16:22,809 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.2 pTM=0.0368 tol=0.0865
2023-02-21 08:16:23,746 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.6 pTM=0.0373 tol=0.0386
2023-02-21 08:16:24,684 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.8 pTM=0.0375 tol=0.0216
2023-02-21 08:16:24,684 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:16:25,625 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.7 pTM=0.0356
2023-02-21 08:16:26,563 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.2 pTM=0.0352 tol=0.108
2023-02-21 08:16:27,501 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.2 pTM=0.0355 tol=0.0393
2023-02-21 08:16:28,440 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.1 pTM=0.0356 tol=0.0211
2023-02-21 08:16:28,440 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:16:28,442 reranking models by 'plddt' metric
2023-02-21 08:16:28,442 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.8 pTM=0.0375
2023-02-21 08:16:28,442 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.0362
2023-02-21 08:16:28,442 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=93.6 pTM=0.0371
2023-02-21 08:16:28,442 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=93.4 pTM=0.0365
2023-02-21 08:16:28,442 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=93.1 pTM=0.0356
2023-02-21 08:16:29,118 Query 37/80: 2m79 (length 18)
2023-02-21 08:16:29,704 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:16:39,321 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:16:46,924 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:16:52,533 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:17:00,141 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:17:07,755 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:17:16,349 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:17:21,933 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:17:31,523 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:17:42,366 Padding length to 25
2023-02-21 08:17:43,337 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.1 pTM=0.0349
2023-02-21 08:17:44,272 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.3 pTM=0.0354 tol=0.144
2023-02-21 08:17:45,208 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.4 pTM=0.0357 tol=0.0699
2023-02-21 08:17:46,148 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.4 pTM=0.0358 tol=0.0344
2023-02-21 08:17:46,148 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:17:47,089 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.4 pTM=0.0351
2023-02-21 08:17:48,028 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.8 pTM=0.0351 tol=0.211
2023-02-21 08:17:48,965 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.3 pTM=0.0356 tol=0.0547
2023-02-21 08:17:49,904 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.4 pTM=0.0357 tol=0.02
2023-02-21 08:17:49,904 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:17:50,845 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.1 pTM=0.0349
2023-02-21 08:17:51,783 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.6 pTM=0.035 tol=0.0627
2023-02-21 08:17:52,720 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.3 pTM=0.0351 tol=0.0354
2023-02-21 08:17:53,658 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.2 pTM=0.035 tol=0.0301
2023-02-21 08:17:53,658 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:17:54,598 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.1 pTM=0.0354
2023-02-21 08:17:55,536 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.2 pTM=0.036 tol=0.103
2023-02-21 08:17:56,473 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.4 pTM=0.0363 tol=0.0344
2023-02-21 08:17:57,411 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.4 pTM=0.0364 tol=0.0274
2023-02-21 08:17:57,411 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:17:58,352 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.4 pTM=0.0353
2023-02-21 08:17:59,289 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.4 pTM=0.0355 tol=0.0983
2023-02-21 08:18:00,227 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.2 pTM=0.0356 tol=0.0517
2023-02-21 08:18:01,165 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.3 pTM=0.0357 tol=0.0233
2023-02-21 08:18:01,165 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:18:01,168 reranking models by 'plddt' metric
2023-02-21 08:18:01,168 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=94.4 pTM=0.0364
2023-02-21 08:18:01,168 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=93.3 pTM=0.0357
2023-02-21 08:18:01,168 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.2 pTM=0.035
2023-02-21 08:18:01,168 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=92.4 pTM=0.0357
2023-02-21 08:18:01,168 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.4 pTM=0.0358
2023-02-21 08:18:01,985 Query 38/80: 5h1i (length 18)
2023-02-21 08:18:02,590 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:18:11,200 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:18:21,795 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:18:32,414 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:18:42,028 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:18:50,626 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:18:57,242 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:19:09,118 Padding length to 25
2023-02-21 08:19:10,087 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=57.3 pTM=0.0231
2023-02-21 08:19:11,024 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=58 pTM=0.0236 tol=0.982
2023-02-21 08:19:11,959 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=57.2 pTM=0.0242 tol=1.41
2023-02-21 08:19:12,896 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=57.5 pTM=0.0241 tol=1.67
2023-02-21 08:19:12,896 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:19:13,836 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=79.2 pTM=0.0307
2023-02-21 08:19:14,775 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.2 pTM=0.0308 tol=0.431
2023-02-21 08:19:15,712 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=82.2 pTM=0.031 tol=0.0536
2023-02-21 08:19:16,650 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.9 pTM=0.0314 tol=0.0373
2023-02-21 08:19:16,650 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:19:17,590 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=66.2 pTM=0.0236
2023-02-21 08:19:18,528 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.8 pTM=0.0317 tol=1.38
2023-02-21 08:19:19,466 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.2 pTM=0.034 tol=0.165
2023-02-21 08:19:20,403 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.0347 tol=0.0821
2023-02-21 08:19:20,403 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:19:21,342 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=61.7 pTM=0.0223
2023-02-21 08:19:22,279 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85 pTM=0.0309 tol=1.99
2023-02-21 08:19:23,215 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.8 pTM=0.0336 tol=0.126
2023-02-21 08:19:24,153 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.9 pTM=0.0342 tol=0.0524
2023-02-21 08:19:24,153 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:19:25,094 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.0226
2023-02-21 08:19:26,031 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84 pTM=0.0304 tol=1.95
2023-02-21 08:19:26,969 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.1 pTM=0.0344 tol=0.206
2023-02-21 08:19:27,906 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.5 pTM=0.0354 tol=0.08
2023-02-21 08:19:27,906 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:19:27,908 reranking models by 'plddt' metric
2023-02-21 08:19:27,909 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.5 pTM=0.0354
2023-02-21 08:19:27,909 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.0347
2023-02-21 08:19:27,909 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.9 pTM=0.0342
2023-02-21 08:19:27,909 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=82.9 pTM=0.0314
2023-02-21 08:19:27,909 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=57.5 pTM=0.0241
2023-02-21 08:19:28,581 Query 39/80: 6pin (length 18)
2023-02-21 08:19:29,189 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:19:38,790 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:19:47,386 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:19:56,995 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:20:05,599 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:20:11,203 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:20:17,828 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:20:24,437 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:20:33,045 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:20:44,913 Padding length to 25
2023-02-21 08:20:45,893 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.4 pTM=0.0339
2023-02-21 08:20:46,830 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.1 pTM=0.0356 tol=0.123
2023-02-21 08:20:47,766 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.5 pTM=0.0361 tol=0.0929
2023-02-21 08:20:48,703 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.6 pTM=0.0362 tol=0.0272
2023-02-21 08:20:48,703 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:20:49,644 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.9 pTM=0.0343
2023-02-21 08:20:50,583 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.9 pTM=0.0362 tol=0.139
2023-02-21 08:20:51,521 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.1 pTM=0.0363 tol=0.0555
2023-02-21 08:20:52,459 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.1 pTM=0.0362 tol=0.049
2023-02-21 08:20:52,459 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:20:53,399 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0354
2023-02-21 08:20:54,337 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.0363 tol=0.0741
2023-02-21 08:20:55,275 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.7 pTM=0.0365 tol=0.0217
2023-02-21 08:20:56,213 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.7 pTM=0.0366 tol=0.0193
2023-02-21 08:20:56,214 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:20:57,154 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.7 pTM=0.0364
2023-02-21 08:20:58,092 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.0368 tol=0.0772
2023-02-21 08:20:59,028 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.4 pTM=0.0367 tol=0.0304
2023-02-21 08:20:59,965 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.4 pTM=0.0367 tol=0.0262
2023-02-21 08:20:59,965 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:21:00,906 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.7 pTM=0.035
2023-02-21 08:21:01,844 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.2 pTM=0.0364 tol=0.08
2023-02-21 08:21:02,782 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.5 pTM=0.0365 tol=0.021
2023-02-21 08:21:03,719 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.0365 tol=0.0242
2023-02-21 08:21:03,720 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:21:03,722 reranking models by 'plddt' metric
2023-02-21 08:21:03,722 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=95.7 pTM=0.0366
2023-02-21 08:21:03,722 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.0365
2023-02-21 08:21:03,722 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.4 pTM=0.0367
2023-02-21 08:21:03,722 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.1 pTM=0.0362
2023-02-21 08:21:03,722 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.6 pTM=0.0362
2023-02-21 08:21:04,542 Query 40/80: 6pio (length 18)
2023-02-21 08:21:05,145 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:21:13,744 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:21:23,354 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:21:30,945 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:21:40,539 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:21:47,143 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:21:54,756 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:22:04,355 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:22:11,209 Padding length to 25
2023-02-21 08:22:12,194 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93 pTM=0.0345
2023-02-21 08:22:13,131 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94.5 pTM=0.0363 tol=0.103
2023-02-21 08:22:14,067 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.9 pTM=0.0368 tol=0.089
2023-02-21 08:22:15,004 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.8 pTM=0.0369 tol=0.0296
2023-02-21 08:22:15,004 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:22:15,944 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.9 pTM=0.0346
2023-02-21 08:22:16,883 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=95.1 pTM=0.0368 tol=0.145
2023-02-21 08:22:17,821 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.2 pTM=0.0368 tol=0.062
2023-02-21 08:22:18,759 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.1 pTM=0.0366 tol=0.0481
2023-02-21 08:22:18,759 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:22:19,700 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.4 pTM=0.0363
2023-02-21 08:22:20,638 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=96 pTM=0.0372 tol=0.0793
2023-02-21 08:22:21,575 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.2 pTM=0.0374 tol=0.021
2023-02-21 08:22:22,513 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.3 pTM=0.0375 tol=0.0245
2023-02-21 08:22:22,513 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:22:23,453 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=95.3 pTM=0.037
2023-02-21 08:22:24,391 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.6 pTM=0.0373 tol=0.0689
2023-02-21 08:22:25,327 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.8 pTM=0.0374 tol=0.0479
2023-02-21 08:22:26,264 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.0373 tol=0.0269
2023-02-21 08:22:26,264 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:22:27,204 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.2 pTM=0.0354
2023-02-21 08:22:28,142 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.6 pTM=0.0371 tol=0.0751
2023-02-21 08:22:29,080 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.8 pTM=0.0372 tol=0.0258
2023-02-21 08:22:30,017 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.9 pTM=0.0371 tol=0.0209
2023-02-21 08:22:30,018 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:22:30,020 reranking models by 'plddt' metric
2023-02-21 08:22:30,020 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=96.3 pTM=0.0375
2023-02-21 08:22:30,020 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.9 pTM=0.0371
2023-02-21 08:22:30,020 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.0373
2023-02-21 08:22:30,020 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.1 pTM=0.0366
2023-02-21 08:22:30,020 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.8 pTM=0.0369
2023-02-21 08:22:30,703 Query 41/80: 6pip (length 18)
2023-02-21 08:22:31,277 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:22:41,874 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:22:50,484 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:23:00,092 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:23:10,713 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:23:19,324 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:23:27,919 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:23:34,518 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:23:45,523 Padding length to 25
2023-02-21 08:23:46,491 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.1 pTM=0.0337
2023-02-21 08:23:47,428 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94 pTM=0.0356 tol=0.108
2023-02-21 08:23:48,365 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.5 pTM=0.0361 tol=0.0744
2023-02-21 08:23:49,302 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.6 pTM=0.0361 tol=0.0212
2023-02-21 08:23:49,303 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:23:50,245 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=93.6 pTM=0.0341
2023-02-21 08:23:51,183 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.5 pTM=0.0362 tol=0.131
2023-02-21 08:23:52,122 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.7 pTM=0.036 tol=0.0534
2023-02-21 08:23:53,060 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.8 pTM=0.0359 tol=0.0367
2023-02-21 08:23:53,060 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:23:54,001 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.1 pTM=0.0356
2023-02-21 08:23:54,944 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.4 pTM=0.0366 tol=0.0809
2023-02-21 08:23:55,882 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.8 pTM=0.0368 tol=0.0274
2023-02-21 08:23:56,820 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.8 pTM=0.037 tol=0.0178
2023-02-21 08:23:56,821 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:23:57,763 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.5 pTM=0.0362
2023-02-21 08:23:58,701 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.0366 tol=0.0863
2023-02-21 08:23:59,638 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.2 pTM=0.0365 tol=0.0335
2023-02-21 08:24:00,575 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.2 pTM=0.0364 tol=0.0269
2023-02-21 08:24:00,575 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:24:01,516 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.0357
2023-02-21 08:24:02,455 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.3 pTM=0.0369 tol=0.0732
2023-02-21 08:24:03,393 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.6 pTM=0.037 tol=0.0208
2023-02-21 08:24:04,332 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.7 pTM=0.0369 tol=0.0152
2023-02-21 08:24:04,332 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:24:04,334 reranking models by 'plddt' metric
2023-02-21 08:24:04,334 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=95.8 pTM=0.037
2023-02-21 08:24:04,334 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.7 pTM=0.0369
2023-02-21 08:24:04,334 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.2 pTM=0.0364
2023-02-21 08:24:04,334 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.8 pTM=0.0359
2023-02-21 08:24:04,334 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.6 pTM=0.0361
2023-02-21 08:24:05,000 Query 42/80: 7f32 (length 18)
2023-02-21 08:24:05,595 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:24:11,188 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:24:19,791 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:24:30,395 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:24:40,998 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:24:46,583 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:24:57,182 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:25:07,030 Padding length to 25
2023-02-21 08:25:07,999 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=93.6 pTM=0.0351
2023-02-21 08:25:08,934 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=94 pTM=0.0357 tol=0.0906
2023-02-21 08:25:09,870 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=94.2 pTM=0.0363 tol=0.0439
2023-02-21 08:25:10,807 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=94.3 pTM=0.0364 tol=0.0149
2023-02-21 08:25:10,807 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:25:11,749 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=94.6 pTM=0.0359
2023-02-21 08:25:12,688 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=95.2 pTM=0.0359 tol=0.21
2023-02-21 08:25:13,626 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95.3 pTM=0.0367 tol=0.154
2023-02-21 08:25:14,567 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.4 pTM=0.0373 tol=0.0826
2023-02-21 08:25:14,567 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:25:15,508 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=95.4 pTM=0.0355
2023-02-21 08:25:16,446 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.9 pTM=0.0362 tol=0.072
2023-02-21 08:25:17,385 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.1 pTM=0.0365 tol=0.0295
2023-02-21 08:25:18,323 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.2 pTM=0.0367 tol=0.0208
2023-02-21 08:25:18,323 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:25:19,263 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=96.2 pTM=0.0364
2023-02-21 08:25:20,201 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=96.5 pTM=0.0371 tol=0.0889
2023-02-21 08:25:21,138 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=96.8 pTM=0.0379 tol=0.0453
2023-02-21 08:25:22,076 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=96.9 pTM=0.0381 tol=0.0194
2023-02-21 08:25:22,076 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:25:23,017 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=96.1 pTM=0.0363
2023-02-21 08:25:23,956 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.4 pTM=0.036 tol=0.113
2023-02-21 08:25:24,898 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.1 pTM=0.0368 tol=0.0712
2023-02-21 08:25:25,836 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.3 pTM=0.0372 tol=0.0346
2023-02-21 08:25:25,836 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:25:25,839 reranking models by 'plddt' metric
2023-02-21 08:25:25,839 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=96.9 pTM=0.0381
2023-02-21 08:25:25,839 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=96.3 pTM=0.0372
2023-02-21 08:25:25,839 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=96.2 pTM=0.0367
2023-02-21 08:25:25,839 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=95.4 pTM=0.0373
2023-02-21 08:25:25,839 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=94.3 pTM=0.0364
2023-02-21 08:25:26,661 Query 43/80: 2ll5 (length 22)
2023-02-21 08:25:27,262 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:25:34,874 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:25:43,478 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:25:54,089 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:26:00,684 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:26:09,285 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:26:19,880 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:26:25,505 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:26:34,108 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:26:40,718 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:26:46,329 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:26:52,932 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:26:59,547 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:27:07,169 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:27:13,784 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:27:19,406 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:27:28,024 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:27:34,618 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:27:44,230 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:27:49,829 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:27:58,433 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:28:04,105 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:28:13,996 Padding length to 25
2023-02-21 08:28:14,961 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.2 pTM=0.227
2023-02-21 08:28:15,893 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.8 pTM=0.262 tol=0.494
2023-02-21 08:28:16,824 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.1 pTM=0.268 tol=0.0769
2023-02-21 08:28:17,756 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.1 pTM=0.269 tol=0.029
2023-02-21 08:28:17,756 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:28:18,692 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.4 pTM=0.251
2023-02-21 08:28:19,625 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=94.4 pTM=0.282 tol=0.369
2023-02-21 08:28:20,559 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=95 pTM=0.286 tol=0.094
2023-02-21 08:28:21,492 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=95.3 pTM=0.287 tol=0.0757
2023-02-21 08:28:21,492 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:28:22,433 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.8 pTM=0.255
2023-02-21 08:28:23,371 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.6 pTM=0.277 tol=0.17
2023-02-21 08:28:24,309 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.9 pTM=0.279 tol=0.0468
2023-02-21 08:28:25,250 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.1 pTM=0.278 tol=0.0242
2023-02-21 08:28:25,250 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:28:26,190 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.4 pTM=0.266
2023-02-21 08:28:27,128 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.287 tol=0.208
2023-02-21 08:28:28,064 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.8 pTM=0.291 tol=0.0475
2023-02-21 08:28:29,002 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.9 pTM=0.292 tol=0.0134
2023-02-21 08:28:29,002 alphafold2_ptm_model_4_seed_000 took 3.8s (3 recycles)
2023-02-21 08:28:29,943 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.8 pTM=0.271
2023-02-21 08:28:30,882 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.4 pTM=0.289 tol=0.203
2023-02-21 08:28:31,819 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.8 pTM=0.291 tol=0.0309
2023-02-21 08:28:32,758 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.8 pTM=0.291 tol=0.0128
2023-02-21 08:28:32,758 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:28:32,760 reranking models by 'plddt' metric
2023-02-21 08:28:32,760 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.8 pTM=0.291
2023-02-21 08:28:32,760 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=95.9 pTM=0.292
2023-02-21 08:28:32,760 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=95.3 pTM=0.287
2023-02-21 08:28:32,760 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=95.1 pTM=0.278
2023-02-21 08:28:32,761 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.1 pTM=0.269
2023-02-21 08:28:33,437 Query 44/80: 2n07.1_X (length 22)
2023-02-21 08:28:34,051 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:28:44,650 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:28:50,254 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:28:59,855 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:29:09,456 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:29:16,076 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:29:22,677 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:29:31,269 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:29:42,118 Padding length to 25
2023-02-21 08:29:43,087 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=63.1 pTM=0.104
2023-02-21 08:29:44,018 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=62.8 pTM=0.109 tol=0.664
2023-02-21 08:29:44,949 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.7 pTM=0.117 tol=1.62
2023-02-21 08:29:45,880 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.112 tol=0.274
2023-02-21 08:29:45,880 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:29:46,816 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=64.8 pTM=0.124
2023-02-21 08:29:47,749 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=73.8 pTM=0.177 tol=1.56
2023-02-21 08:29:48,681 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.4 pTM=0.183 tol=0.548
2023-02-21 08:29:49,615 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=75.4 pTM=0.185 tol=0.113
2023-02-21 08:29:49,615 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:29:50,550 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=60.3 pTM=0.102
2023-02-21 08:29:51,483 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=58.7 pTM=0.095 tol=0.969
2023-02-21 08:29:52,415 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=58.1 pTM=0.0951 tol=0.976
2023-02-21 08:29:53,347 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=57.8 pTM=0.0941 tol=0.361
2023-02-21 08:29:53,347 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:29:54,282 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.4 pTM=0.119
2023-02-21 08:29:55,214 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=66.3 pTM=0.11 tol=0.436
2023-02-21 08:29:56,145 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.6 pTM=0.11 tol=0.485
2023-02-21 08:29:57,077 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=65.2 pTM=0.109 tol=0.253
2023-02-21 08:29:57,077 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:29:58,011 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=61.5 pTM=0.102
2023-02-21 08:29:58,943 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=63.7 pTM=0.11 tol=0.56
2023-02-21 08:29:59,875 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=64.6 pTM=0.112 tol=0.331
2023-02-21 08:30:00,807 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=65.6 pTM=0.113 tol=0.25
2023-02-21 08:30:00,807 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:30:00,809 reranking models by 'plddt' metric
2023-02-21 08:30:00,810 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=75.4 pTM=0.185
2023-02-21 08:30:00,810 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=65.6 pTM=0.113
2023-02-21 08:30:00,810 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=65.2 pTM=0.109
2023-02-21 08:30:00,810 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=63.2 pTM=0.112
2023-02-21 08:30:00,810 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=57.8 pTM=0.0941
2023-02-21 08:30:01,649 Query 45/80: 5kx1 (length 22)
2023-02-21 08:30:02,249 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:30:12,851 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:30:20,448 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:30:29,047 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:30:36,629 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:30:42,228 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:30:51,818 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:30:58,438 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:31:07,307 Padding length to 25
2023-02-21 08:31:08,271 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.2 pTM=0.186
2023-02-21 08:31:09,203 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.8 pTM=0.196 tol=0.162
2023-02-21 08:31:10,138 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.2 pTM=0.198 tol=0.0466
2023-02-21 08:31:11,070 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.1 pTM=0.198 tol=0.0137
2023-02-21 08:31:11,071 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 08:31:12,007 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.4 pTM=0.175
2023-02-21 08:31:12,946 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.2 pTM=0.205 tol=0.154
2023-02-21 08:31:13,883 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.7 pTM=0.208 tol=0.0345
2023-02-21 08:31:14,823 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.209 tol=0.0176
2023-02-21 08:31:14,823 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:31:15,764 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=84.5 pTM=0.174
2023-02-21 08:31:16,702 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.9 pTM=0.181 tol=0.793
2023-02-21 08:31:17,640 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.4 pTM=0.203 tol=0.348
2023-02-21 08:31:18,578 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.3 pTM=0.209 tol=0.0795
2023-02-21 08:31:18,578 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:31:19,518 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.2 pTM=0.176
2023-02-21 08:31:20,456 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.8 pTM=0.205 tol=0.303
2023-02-21 08:31:21,393 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.9 pTM=0.204 tol=0.0552
2023-02-21 08:31:22,330 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.9 pTM=0.204 tol=0.0181
2023-02-21 08:31:22,330 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:31:23,271 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=78.4 pTM=0.153
2023-02-21 08:31:24,209 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.6 pTM=0.191 tol=0.616
2023-02-21 08:31:25,151 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.8 pTM=0.199 tol=0.127
2023-02-21 08:31:26,090 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.1 pTM=0.201 tol=0.0259
2023-02-21 08:31:26,090 alphafold2_ptm_model_5_seed_000 took 3.8s (3 recycles)
2023-02-21 08:31:26,092 reranking models by 'plddt' metric
2023-02-21 08:31:26,092 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.3 pTM=0.209
2023-02-21 08:31:26,092 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=92.9 pTM=0.204
2023-02-21 08:31:26,093 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=92.1 pTM=0.201
2023-02-21 08:31:26,093 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.209
2023-02-21 08:31:26,093 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.1 pTM=0.198
2023-02-21 08:31:26,789 Query 46/80: 5kwz (length 26)
2023-02-21 08:31:27,401 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:31:36,997 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:31:42,602 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:31:53,217 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:32:03,827 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:32:14,439 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:32:25,061 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:32:32,661 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:32:40,665 Padding length to 36
2023-02-21 08:32:48,073 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.9 pTM=0.355
2023-02-21 08:32:48,955 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.8 pTM=0.377 tol=0.103
2023-02-21 08:32:49,836 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.378 tol=0.032
2023-02-21 08:32:50,717 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.7 pTM=0.38 tol=0.019
2023-02-21 08:32:50,717 alphafold2_ptm_model_1_seed_000 took 10.1s (3 recycles)
2023-02-21 08:32:51,604 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.9 pTM=0.384
2023-02-21 08:32:52,488 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=93.9 pTM=0.403 tol=0.137
2023-02-21 08:32:53,372 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=94.1 pTM=0.411 tol=0.0405
2023-02-21 08:32:54,256 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=94.1 pTM=0.412 tol=0.0188
2023-02-21 08:32:54,256 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:32:55,148 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.8 pTM=0.389
2023-02-21 08:32:56,032 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.4 pTM=0.407 tol=0.0757
2023-02-21 08:32:56,918 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.4 pTM=0.405 tol=0.0529
2023-02-21 08:32:57,802 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.4 pTM=0.408 tol=0.0264
2023-02-21 08:32:57,802 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:32:58,687 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.4 pTM=0.383
2023-02-21 08:32:59,568 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.6 pTM=0.41 tol=0.141
2023-02-21 08:33:00,448 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.3 pTM=0.423 tol=0.0523
2023-02-21 08:33:01,330 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.4 pTM=0.426 tol=0.0222
2023-02-21 08:33:01,330 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:33:02,217 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.3 pTM=0.383
2023-02-21 08:33:03,101 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.5 pTM=0.405 tol=0.118
2023-02-21 08:33:03,984 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.2 pTM=0.412 tol=0.028
2023-02-21 08:33:04,867 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.2 pTM=0.413 tol=0.0154
2023-02-21 08:33:04,867 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:33:04,870 reranking models by 'plddt' metric
2023-02-21 08:33:04,871 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.4 pTM=0.426
2023-02-21 08:33:04,871 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.4 pTM=0.408
2023-02-21 08:33:04,871 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=95.2 pTM=0.413
2023-02-21 08:33:04,871 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=94.1 pTM=0.412
2023-02-21 08:33:04,871 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.7 pTM=0.38
2023-02-21 08:33:05,624 Query 47/80: 7m3u (length 27)
2023-02-21 08:33:06,221 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:33:15,823 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:33:24,423 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:33:30,020 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:33:35,638 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:33:45,250 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:33:55,851 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:34:01,466 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:34:13,351 Padding length to 36
2023-02-21 08:34:14,267 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=64.1 pTM=0.203
2023-02-21 08:34:15,148 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=65.3 pTM=0.205 tol=1.01
2023-02-21 08:34:16,029 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=66.9 pTM=0.211 tol=0.203
2023-02-21 08:34:16,909 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.223 tol=0.14
2023-02-21 08:34:16,909 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:34:17,796 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=69.6 pTM=0.237
2023-02-21 08:34:18,680 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.222 tol=0.758
2023-02-21 08:34:19,562 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.3 pTM=0.211 tol=0.27
2023-02-21 08:34:20,446 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.3 pTM=0.211 tol=0.145
2023-02-21 08:34:20,446 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:34:21,332 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.22
2023-02-21 08:34:22,215 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.3 pTM=0.196 tol=0.929
2023-02-21 08:34:23,097 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=66.5 pTM=0.179 tol=0.155
2023-02-21 08:34:23,980 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=66.8 pTM=0.182 tol=0.258
2023-02-21 08:34:23,980 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:34:24,948 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=66.6 pTM=0.199
2023-02-21 08:34:25,829 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=65.6 pTM=0.202 tol=0.541
2023-02-21 08:34:26,709 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=66.1 pTM=0.211 tol=0.559
2023-02-21 08:34:27,589 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=66.4 pTM=0.216 tol=0.181
2023-02-21 08:34:27,589 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:34:28,475 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.8 pTM=0.205
2023-02-21 08:34:29,358 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=64.6 pTM=0.182 tol=0.84
2023-02-21 08:34:30,240 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=62.8 pTM=0.173 tol=0.674
2023-02-21 08:34:31,123 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=62.5 pTM=0.172 tol=0.315
2023-02-21 08:34:31,123 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:34:31,126 reranking models by 'plddt' metric
2023-02-21 08:34:31,126 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=68.7 pTM=0.223
2023-02-21 08:34:31,126 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=66.8 pTM=0.182
2023-02-21 08:34:31,126 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=66.4 pTM=0.216
2023-02-21 08:34:31,126 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=66.3 pTM=0.211
2023-02-21 08:34:31,126 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=62.5 pTM=0.172
2023-02-21 08:34:31,800 Query 48/80: 2kvx (length 28)
2023-02-21 08:34:32,404 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:34:39,026 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:34:48,633 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:34:56,242 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:35:04,854 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:35:12,453 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:35:21,066 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:35:31,671 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:35:42,519 Padding length to 36
2023-02-21 08:35:43,443 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.8 pTM=0.433
2023-02-21 08:35:44,324 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.8 pTM=0.464 tol=0.137
2023-02-21 08:35:45,204 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.469 tol=0.0477
2023-02-21 08:35:46,085 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.7 pTM=0.47 tol=0.0215
2023-02-21 08:35:46,085 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:35:46,972 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.2 pTM=0.448
2023-02-21 08:35:47,856 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.1 pTM=0.469 tol=0.18
2023-02-21 08:35:48,739 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=93.2 pTM=0.477 tol=0.048
2023-02-21 08:35:49,622 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=93.5 pTM=0.48 tol=0.0171
2023-02-21 08:35:49,622 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:35:50,509 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.5 pTM=0.479
2023-02-21 08:35:51,392 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94 pTM=0.495 tol=0.257
2023-02-21 08:35:52,275 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.8 pTM=0.5 tol=0.0449
2023-02-21 08:35:53,159 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.505 tol=0.0184
2023-02-21 08:35:53,159 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:35:54,043 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.2 pTM=0.446
2023-02-21 08:35:54,923 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.2 pTM=0.46 tol=0.271
2023-02-21 08:35:55,803 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.9 pTM=0.464 tol=0.0822
2023-02-21 08:35:56,684 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.5 pTM=0.469 tol=0.0221
2023-02-21 08:35:56,684 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:35:57,570 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.3 pTM=0.485
2023-02-21 08:35:58,453 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.9 pTM=0.502 tol=0.175
2023-02-21 08:35:59,336 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.4 pTM=0.509 tol=0.0353
2023-02-21 08:36:00,220 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.6 pTM=0.51 tol=0.0155
2023-02-21 08:36:00,220 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:36:00,227 reranking models by 'plddt' metric
2023-02-21 08:36:00,227 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.6 pTM=0.51
2023-02-21 08:36:00,227 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.505
2023-02-21 08:36:00,227 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=93.5 pTM=0.48
2023-02-21 08:36:00,227 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.7 pTM=0.47
2023-02-21 08:36:00,227 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=92.5 pTM=0.469
2023-02-21 08:36:01,047 Query 49/80: 7l53 (length 28)
2023-02-21 08:36:01,653 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:36:08,253 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:36:18,876 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:36:25,474 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:36:33,081 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:36:42,675 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:36:48,279 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:36:56,879 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:37:04,483 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:37:13,370 Padding length to 36
2023-02-21 08:37:14,284 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.6 pTM=0.223
2023-02-21 08:37:15,165 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.218 tol=0.597
2023-02-21 08:37:16,045 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.9 pTM=0.218 tol=0.309
2023-02-21 08:37:16,926 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=65.9 pTM=0.218 tol=0.219
2023-02-21 08:37:16,926 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:37:17,812 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.268
2023-02-21 08:37:18,696 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.1 pTM=0.226 tol=0.993
2023-02-21 08:37:19,578 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.5 pTM=0.222 tol=0.109
2023-02-21 08:37:20,461 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.22 tol=0.134
2023-02-21 08:37:20,461 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:37:21,348 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=71.6 pTM=0.229
2023-02-21 08:37:22,230 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.8 pTM=0.203 tol=0.806
2023-02-21 08:37:23,113 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.8 pTM=0.211 tol=0.424
2023-02-21 08:37:23,996 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.221 tol=0.135
2023-02-21 08:37:23,996 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:37:24,879 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.216
2023-02-21 08:37:25,759 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.2 pTM=0.197 tol=0.969
2023-02-21 08:37:26,639 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=66.7 pTM=0.211 tol=0.254
2023-02-21 08:37:27,519 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.22 tol=0.149
2023-02-21 08:37:27,519 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:37:28,405 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.5 pTM=0.268
2023-02-21 08:37:29,288 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.203 tol=0.536
2023-02-21 08:37:30,170 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.206 tol=0.234
2023-02-21 08:37:31,052 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.215 tol=0.202
2023-02-21 08:37:31,052 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:37:31,056 reranking models by 'plddt' metric
2023-02-21 08:37:31,056 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=70.9 pTM=0.221
2023-02-21 08:37:31,056 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=68.4 pTM=0.215
2023-02-21 08:37:31,056 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=67.6 pTM=0.22
2023-02-21 08:37:31,056 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=66.5 pTM=0.22
2023-02-21 08:37:31,056 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=65.9 pTM=0.218
2023-02-21 08:37:31,724 Query 50/80: 7l54 (length 28)
2023-02-21 08:37:32,306 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:37:41,912 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:37:51,522 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:38:00,132 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:38:09,730 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:38:19,330 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:38:24,943 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:38:33,538 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:38:44,536 Padding length to 36
2023-02-21 08:38:45,451 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.6 pTM=0.223
2023-02-21 08:38:46,333 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.218 tol=0.597
2023-02-21 08:38:47,213 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.9 pTM=0.218 tol=0.309
2023-02-21 08:38:48,093 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=65.9 pTM=0.218 tol=0.219
2023-02-21 08:38:48,093 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:38:48,980 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.268
2023-02-21 08:38:49,863 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.1 pTM=0.226 tol=0.993
2023-02-21 08:38:50,746 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.5 pTM=0.222 tol=0.109
2023-02-21 08:38:51,629 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.22 tol=0.134
2023-02-21 08:38:51,629 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:38:52,516 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=71.6 pTM=0.229
2023-02-21 08:38:53,399 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.8 pTM=0.203 tol=0.806
2023-02-21 08:38:54,281 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.8 pTM=0.211 tol=0.424
2023-02-21 08:38:55,164 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.221 tol=0.135
2023-02-21 08:38:55,165 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:38:56,048 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.216
2023-02-21 08:38:56,928 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.2 pTM=0.197 tol=0.969
2023-02-21 08:38:57,808 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=66.7 pTM=0.211 tol=0.254
2023-02-21 08:38:58,688 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.22 tol=0.149
2023-02-21 08:38:58,688 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:38:59,574 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.5 pTM=0.268
2023-02-21 08:39:00,457 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.203 tol=0.536
2023-02-21 08:39:01,339 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.206 tol=0.234
2023-02-21 08:39:02,222 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.215 tol=0.202
2023-02-21 08:39:02,222 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:39:02,225 reranking models by 'plddt' metric
2023-02-21 08:39:02,225 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=70.9 pTM=0.221
2023-02-21 08:39:02,225 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=68.4 pTM=0.215
2023-02-21 08:39:02,225 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=67.6 pTM=0.22
2023-02-21 08:39:02,225 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=66.5 pTM=0.22
2023-02-21 08:39:02,226 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=65.9 pTM=0.218
2023-02-21 08:39:02,903 Query 51/80: 7l55 (length 28)
2023-02-21 08:39:03,505 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:39:10,103 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:39:20,703 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:39:30,307 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:39:40,906 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:39:47,531 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:39:56,143 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:40:06,990 Padding length to 36
2023-02-21 08:40:07,908 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.6 pTM=0.223
2023-02-21 08:40:08,789 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.218 tol=0.597
2023-02-21 08:40:09,669 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.9 pTM=0.218 tol=0.309
2023-02-21 08:40:10,554 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=65.9 pTM=0.218 tol=0.219
2023-02-21 08:40:10,554 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:40:11,441 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.268
2023-02-21 08:40:12,325 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.1 pTM=0.226 tol=0.993
2023-02-21 08:40:13,208 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.5 pTM=0.222 tol=0.109
2023-02-21 08:40:14,096 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.22 tol=0.134
2023-02-21 08:40:14,096 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:40:14,983 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=71.6 pTM=0.229
2023-02-21 08:40:15,870 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.8 pTM=0.203 tol=0.806
2023-02-21 08:40:16,757 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.8 pTM=0.211 tol=0.424
2023-02-21 08:40:17,645 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.221 tol=0.135
2023-02-21 08:40:17,645 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:40:18,529 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.216
2023-02-21 08:40:19,409 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.2 pTM=0.197 tol=0.969
2023-02-21 08:40:20,291 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=66.7 pTM=0.211 tol=0.254
2023-02-21 08:40:21,171 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.22 tol=0.149
2023-02-21 08:40:21,171 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:40:22,060 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.5 pTM=0.268
2023-02-21 08:40:22,943 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.203 tol=0.536
2023-02-21 08:40:23,825 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.206 tol=0.234
2023-02-21 08:40:24,707 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.4 pTM=0.215 tol=0.202
2023-02-21 08:40:24,707 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:40:24,710 reranking models by 'plddt' metric
2023-02-21 08:40:24,710 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=70.9 pTM=0.221
2023-02-21 08:40:24,710 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=68.4 pTM=0.215
2023-02-21 08:40:24,710 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=67.6 pTM=0.22
2023-02-21 08:40:24,711 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=66.5 pTM=0.22
2023-02-21 08:40:24,711 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=65.9 pTM=0.218
2023-02-21 08:40:25,508 Query 52/80: 1znu (length 29)
2023-02-21 08:40:26,105 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:40:31,707 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:40:39,317 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:40:49,947 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:40:59,588 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:41:07,177 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:41:18,087 Padding length to 36
2023-02-21 08:41:19,013 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.9 pTM=0.477
2023-02-21 08:41:19,898 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=93.1 pTM=0.501 tol=0.213
2023-02-21 08:41:20,783 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=93.4 pTM=0.502 tol=0.0832
2023-02-21 08:41:21,668 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=93.5 pTM=0.502 tol=0.0332
2023-02-21 08:41:21,668 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:41:22,558 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.1 pTM=0.472
2023-02-21 08:41:23,444 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87 pTM=0.459 tol=0.235
2023-02-21 08:41:24,327 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.9 pTM=0.472 tol=0.604
2023-02-21 08:41:25,216 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.4 pTM=0.489 tol=0.102
2023-02-21 08:41:25,216 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:26,103 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.7 pTM=0.518
2023-02-21 08:41:26,987 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.9 pTM=0.551 tol=0.239
2023-02-21 08:41:27,870 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.3 pTM=0.55 tol=0.0656
2023-02-21 08:41:28,754 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.4 pTM=0.551 tol=0.031
2023-02-21 08:41:28,754 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:29,638 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.4 pTM=0.433
2023-02-21 08:41:30,519 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88.3 pTM=0.464 tol=0.838
2023-02-21 08:41:31,399 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.3 pTM=0.502 tol=0.447
2023-02-21 08:41:32,280 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.4 pTM=0.509 tol=0.0582
2023-02-21 08:41:32,280 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:33,167 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.9 pTM=0.508
2023-02-21 08:41:34,050 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.9 pTM=0.519 tol=0.181
2023-02-21 08:41:34,933 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.3 pTM=0.522 tol=0.054
2023-02-21 08:41:35,816 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.523 tol=0.0251
2023-02-21 08:41:35,816 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:35,819 reranking models by 'plddt' metric
2023-02-21 08:41:35,819 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=96.4 pTM=0.551
2023-02-21 08:41:35,820 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.523
2023-02-21 08:41:35,820 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.4 pTM=0.509
2023-02-21 08:41:35,820 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=93.5 pTM=0.502
2023-02-21 08:41:35,820 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.4 pTM=0.489
2023-02-21 08:41:36,484 Query 53/80: 2k7g (length 29)
2023-02-21 08:41:38,457 Padding length to 36
2023-02-21 08:41:39,362 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.2 pTM=0.455
2023-02-21 08:41:40,248 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.6 pTM=0.474 tol=0.116
2023-02-21 08:41:41,128 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.2 pTM=0.479 tol=0.0455
2023-02-21 08:41:42,009 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.2 pTM=0.481 tol=0.0171
2023-02-21 08:41:42,009 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:41:42,896 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.4 pTM=0.473
2023-02-21 08:41:43,779 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.6 pTM=0.491 tol=0.109
2023-02-21 08:41:44,662 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.7 pTM=0.49 tol=0.0414
2023-02-21 08:41:45,546 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.7 pTM=0.49 tol=0.0132
2023-02-21 08:41:45,546 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:46,433 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.4 pTM=0.526
2023-02-21 08:41:47,320 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.6 pTM=0.534 tol=0.133
2023-02-21 08:41:48,203 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.8 pTM=0.534 tol=0.0425
2023-02-21 08:41:49,087 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.9 pTM=0.533 tol=0.018
2023-02-21 08:41:49,087 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:49,971 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.2 pTM=0.493
2023-02-21 08:41:50,851 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.1 pTM=0.517 tol=0.106
2023-02-21 08:41:51,732 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.2 pTM=0.52 tol=0.0404
2023-02-21 08:41:52,613 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.5 pTM=0.521 tol=0.0159
2023-02-21 08:41:52,613 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:53,499 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=95.1 pTM=0.532
2023-02-21 08:41:54,383 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.4 pTM=0.547 tol=0.13
2023-02-21 08:41:55,266 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.6 pTM=0.55 tol=0.0439
2023-02-21 08:41:56,149 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.5 pTM=0.55 tol=0.0158
2023-02-21 08:41:56,149 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:41:56,152 reranking models by 'plddt' metric
2023-02-21 08:41:56,152 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.5 pTM=0.55
2023-02-21 08:41:56,152 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.9 pTM=0.533
2023-02-21 08:41:56,153 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.5 pTM=0.521
2023-02-21 08:41:56,153 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=92.7 pTM=0.49
2023-02-21 08:41:56,153 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=92.2 pTM=0.481
2023-02-21 08:41:56,816 Query 54/80: 2kch (length 29)
2023-02-21 08:41:58,674 Padding length to 36
2023-02-21 08:41:59,576 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.1 pTM=0.426
2023-02-21 08:42:00,457 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.2 pTM=0.464 tol=0.481
2023-02-21 08:42:01,337 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.7 pTM=0.464 tol=0.0615
2023-02-21 08:42:02,217 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.2 pTM=0.47 tol=0.0716
2023-02-21 08:42:02,217 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:03,104 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.9 pTM=0.475
2023-02-21 08:42:03,987 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.9 pTM=0.466 tol=0.374
2023-02-21 08:42:04,870 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.9 pTM=0.473 tol=0.245
2023-02-21 08:42:05,754 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.4 pTM=0.467 tol=0.0435
2023-02-21 08:42:05,754 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:06,641 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90 pTM=0.501
2023-02-21 08:42:07,525 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.4 pTM=0.543 tol=0.235
2023-02-21 08:42:08,408 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=96.3 pTM=0.548 tol=0.0759
2023-02-21 08:42:09,293 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=96.5 pTM=0.55 tol=0.0205
2023-02-21 08:42:09,294 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:10,177 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.2 pTM=0.459
2023-02-21 08:42:11,058 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.4 pTM=0.473 tol=0.334
2023-02-21 08:42:11,938 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=88.9 pTM=0.473 tol=0.531
2023-02-21 08:42:12,819 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.4 pTM=0.482 tol=0.648
2023-02-21 08:42:12,819 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:13,706 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.2 pTM=0.469
2023-02-21 08:42:14,589 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.1 pTM=0.505 tol=1.17
2023-02-21 08:42:15,476 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.9 pTM=0.52 tol=0.1
2023-02-21 08:42:16,363 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.521 tol=0.0322
2023-02-21 08:42:16,364 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:16,367 reranking models by 'plddt' metric
2023-02-21 08:42:16,367 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=96.5 pTM=0.55
2023-02-21 08:42:16,367 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.521
2023-02-21 08:42:16,367 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.4 pTM=0.482
2023-02-21 08:42:16,367 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.2 pTM=0.47
2023-02-21 08:42:16,367 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.4 pTM=0.467
2023-02-21 08:42:17,185 Query 55/80: 2lam (length 29)
2023-02-21 08:42:19,063 Padding length to 36
2023-02-21 08:42:19,966 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.9 pTM=0.437
2023-02-21 08:42:20,847 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.7 pTM=0.447 tol=0.142
2023-02-21 08:42:21,726 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.1 pTM=0.451 tol=0.0447
2023-02-21 08:42:22,607 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.4 pTM=0.453 tol=0.0183
2023-02-21 08:42:22,607 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:23,494 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.6 pTM=0.453
2023-02-21 08:42:24,378 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.9 pTM=0.459 tol=0.129
2023-02-21 08:42:25,260 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.9 pTM=0.46 tol=0.0401
2023-02-21 08:42:26,144 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.9 pTM=0.46 tol=0.00912
2023-02-21 08:42:26,144 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:27,035 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.4 pTM=0.494
2023-02-21 08:42:27,923 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.2 pTM=0.507 tol=0.157
2023-02-21 08:42:28,810 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.9 pTM=0.517 tol=0.052
2023-02-21 08:42:29,697 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.517 tol=0.0231
2023-02-21 08:42:29,698 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:42:30,586 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.2 pTM=0.462
2023-02-21 08:42:31,474 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.8 pTM=0.494 tol=0.15
2023-02-21 08:42:32,358 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.1 pTM=0.498 tol=0.0462
2023-02-21 08:42:33,243 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.2 pTM=0.5 tol=0.0203
2023-02-21 08:42:33,243 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:34,134 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.6 pTM=0.513
2023-02-21 08:42:35,021 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.8 pTM=0.509 tol=0.159
2023-02-21 08:42:35,908 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.1 pTM=0.515 tol=0.047
2023-02-21 08:42:36,799 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.1 pTM=0.518 tol=0.0197
2023-02-21 08:42:36,800 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:42:36,803 reranking models by 'plddt' metric
2023-02-21 08:42:36,803 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.1 pTM=0.518
2023-02-21 08:42:36,803 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.517
2023-02-21 08:42:36,803 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.2 pTM=0.5
2023-02-21 08:42:36,803 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.9 pTM=0.46
2023-02-21 08:42:36,803 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.4 pTM=0.453
2023-02-21 08:42:37,472 Query 56/80: 2lur (length 29)
2023-02-21 08:42:39,301 Padding length to 36
2023-02-21 08:42:40,200 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.1 pTM=0.379
2023-02-21 08:42:41,081 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=81.1 pTM=0.39 tol=0.552
2023-02-21 08:42:41,960 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.4 pTM=0.417 tol=0.581
2023-02-21 08:42:42,841 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.5 pTM=0.438 tol=0.553
2023-02-21 08:42:42,841 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:43,728 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.1 pTM=0.42
2023-02-21 08:42:44,611 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.3 pTM=0.44 tol=0.478
2023-02-21 08:42:45,498 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.1 pTM=0.455 tol=0.223
2023-02-21 08:42:46,386 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.9 pTM=0.464 tol=0.0987
2023-02-21 08:42:46,386 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:47,277 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=86.6 pTM=0.429
2023-02-21 08:42:48,164 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.8 pTM=0.483 tol=0.687
2023-02-21 08:42:49,051 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.7 pTM=0.483 tol=0.173
2023-02-21 08:42:49,939 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.4 pTM=0.489 tol=0.138
2023-02-21 08:42:49,939 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:50,827 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.8 pTM=0.441
2023-02-21 08:42:51,712 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.464 tol=0.293
2023-02-21 08:42:52,597 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.8 pTM=0.47 tol=0.0805
2023-02-21 08:42:53,482 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.8 pTM=0.47 tol=0.0237
2023-02-21 08:42:53,482 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:54,373 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.9 pTM=0.489
2023-02-21 08:42:55,260 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.7 pTM=0.473 tol=0.212
2023-02-21 08:42:56,146 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.7 pTM=0.474 tol=0.0638
2023-02-21 08:42:57,034 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.7 pTM=0.473 tol=0.0186
2023-02-21 08:42:57,034 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:42:57,037 reranking models by 'plddt' metric
2023-02-21 08:42:57,037 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.4 pTM=0.489
2023-02-21 08:42:57,037 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.8 pTM=0.47
2023-02-21 08:42:57,038 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=90.7 pTM=0.473
2023-02-21 08:42:57,038 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88.9 pTM=0.464
2023-02-21 08:42:57,038 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.5 pTM=0.438
2023-02-21 08:42:57,857 Query 57/80: 2m9o (length 29)
2023-02-21 08:42:59,700 Padding length to 36
2023-02-21 08:43:00,600 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.6 pTM=0.457
2023-02-21 08:43:01,480 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.467 tol=0.136
2023-02-21 08:43:02,360 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.6 pTM=0.469 tol=0.0429
2023-02-21 08:43:03,245 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.6 pTM=0.469 tol=0.0158
2023-02-21 08:43:03,245 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:04,136 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.9 pTM=0.463
2023-02-21 08:43:05,023 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.3 pTM=0.466 tol=0.142
2023-02-21 08:43:05,910 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.2 pTM=0.465 tol=0.0371
2023-02-21 08:43:06,797 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.5 pTM=0.466 tol=0.0111
2023-02-21 08:43:06,798 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:07,689 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.3 pTM=0.501
2023-02-21 08:43:08,576 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95 pTM=0.517 tol=0.161
2023-02-21 08:43:09,464 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.4 pTM=0.52 tol=0.0448
2023-02-21 08:43:10,351 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.2 pTM=0.519 tol=0.0265
2023-02-21 08:43:10,351 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:43:11,240 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.7 pTM=0.476
2023-02-21 08:43:12,125 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.2 pTM=0.501 tol=0.132
2023-02-21 08:43:13,009 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.4 pTM=0.5 tol=0.0456
2023-02-21 08:43:13,894 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.6 pTM=0.502 tol=0.0178
2023-02-21 08:43:13,894 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:14,785 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.6 pTM=0.513
2023-02-21 08:43:15,673 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.7 pTM=0.528 tol=0.151
2023-02-21 08:43:16,560 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.9 pTM=0.531 tol=0.0499
2023-02-21 08:43:17,447 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.9 pTM=0.531 tol=0.0177
2023-02-21 08:43:17,447 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:17,450 reranking models by 'plddt' metric
2023-02-21 08:43:17,451 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.9 pTM=0.531
2023-02-21 08:43:17,451 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.2 pTM=0.519
2023-02-21 08:43:17,451 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.6 pTM=0.502
2023-02-21 08:43:17,451 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=91.6 pTM=0.469
2023-02-21 08:43:17,451 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.5 pTM=0.466
2023-02-21 08:43:18,114 Query 58/80: 2mw0 (length 29)
2023-02-21 08:43:20,108 Padding length to 36
2023-02-21 08:43:21,006 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.3 pTM=0.365
2023-02-21 08:43:21,886 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.3 pTM=0.419 tol=1.03
2023-02-21 08:43:22,767 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.6 pTM=0.427 tol=0.265
2023-02-21 08:43:23,651 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.8 pTM=0.43 tol=0.0777
2023-02-21 08:43:23,651 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:24,543 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.7 pTM=0.405
2023-02-21 08:43:25,430 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89 pTM=0.423 tol=0.384
2023-02-21 08:43:26,317 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.5 pTM=0.443 tol=0.11
2023-02-21 08:43:27,204 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.9 pTM=0.444 tol=0.0213
2023-02-21 08:43:27,204 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:28,095 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.466
2023-02-21 08:43:28,983 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.8 pTM=0.495 tol=0.168
2023-02-21 08:43:29,870 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.9 pTM=0.504 tol=0.0684
2023-02-21 08:43:30,758 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.6 pTM=0.502 tol=0.0251
2023-02-21 08:43:30,758 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:43:31,646 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.2 pTM=0.427
2023-02-21 08:43:32,531 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.6 pTM=0.437 tol=0.147
2023-02-21 08:43:33,415 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.9 pTM=0.453 tol=0.244
2023-02-21 08:43:34,300 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.4 pTM=0.471 tol=0.128
2023-02-21 08:43:34,300 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:35,191 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.8 pTM=0.456
2023-02-21 08:43:36,078 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=94.6 pTM=0.494 tol=0.176
2023-02-21 08:43:36,965 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.1 pTM=0.499 tol=0.0446
2023-02-21 08:43:37,853 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.4 pTM=0.504 tol=0.0189
2023-02-21 08:43:37,853 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:37,856 reranking models by 'plddt' metric
2023-02-21 08:43:37,856 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.4 pTM=0.504
2023-02-21 08:43:37,856 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.6 pTM=0.502
2023-02-21 08:43:37,856 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.4 pTM=0.471
2023-02-21 08:43:37,856 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.9 pTM=0.444
2023-02-21 08:43:37,856 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=89.8 pTM=0.43
2023-02-21 08:43:38,524 Query 59/80: 7k7x (length 29)
2023-02-21 08:43:40,378 Padding length to 36
2023-02-21 08:43:41,270 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.9 pTM=0.468
2023-02-21 08:43:42,151 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.3 pTM=0.487 tol=0.197
2023-02-21 08:43:43,036 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.5 pTM=0.489 tol=0.0955
2023-02-21 08:43:43,921 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.8 pTM=0.491 tol=0.0329
2023-02-21 08:43:43,921 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:44,812 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.8 pTM=0.487
2023-02-21 08:43:45,700 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.5 pTM=0.495 tol=0.142
2023-02-21 08:43:46,587 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.7 pTM=0.495 tol=0.0511
2023-02-21 08:43:47,475 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.8 pTM=0.496 tol=0.0271
2023-02-21 08:43:47,475 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:43:48,366 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.5 pTM=0.516
2023-02-21 08:43:49,257 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.528 tol=0.146
2023-02-21 08:43:50,144 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.6 pTM=0.533 tol=0.0348
2023-02-21 08:43:51,032 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.6 pTM=0.533 tol=0.0127
2023-02-21 08:43:51,032 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:43:51,921 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93 pTM=0.491
2023-02-21 08:43:52,806 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.9 pTM=0.517 tol=0.192
2023-02-21 08:43:53,690 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95 pTM=0.516 tol=0.0474
2023-02-21 08:43:54,575 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.9 pTM=0.515 tol=0.0183
2023-02-21 08:43:54,575 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:43:55,466 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.8 pTM=0.522
2023-02-21 08:43:56,354 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=96.2 pTM=0.543 tol=0.114
2023-02-21 08:43:57,241 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=96.2 pTM=0.542 tol=0.0339
2023-02-21 08:43:58,128 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=96.2 pTM=0.54 tol=0.0289
2023-02-21 08:43:58,129 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:43:58,132 reranking models by 'plddt' metric
2023-02-21 08:43:58,132 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=96.2 pTM=0.54
2023-02-21 08:43:58,132 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.6 pTM=0.533
2023-02-21 08:43:58,132 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=94.9 pTM=0.515
2023-02-21 08:43:58,132 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.8 pTM=0.491
2023-02-21 08:43:58,132 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92.8 pTM=0.496
2023-02-21 08:43:58,960 Query 60/80: 7lhc (length 29)
2023-02-21 08:44:00,820 Padding length to 36
2023-02-21 08:44:01,724 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.4 pTM=0.462
2023-02-21 08:44:02,605 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.1 pTM=0.486 tol=0.205
2023-02-21 08:44:03,489 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.5 pTM=0.488 tol=0.0826
2023-02-21 08:44:04,375 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.6 pTM=0.49 tol=0.0355
2023-02-21 08:44:04,375 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:44:05,266 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.1 pTM=0.479
2023-02-21 08:44:06,154 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.4 pTM=0.495 tol=0.14
2023-02-21 08:44:07,041 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.6 pTM=0.494 tol=0.0517
2023-02-21 08:44:07,929 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.6 pTM=0.494 tol=0.0155
2023-02-21 08:44:07,929 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:44:08,820 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.8 pTM=0.522
2023-02-21 08:44:09,708 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=95.2 pTM=0.527 tol=0.146
2023-02-21 08:44:10,595 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=95.5 pTM=0.531 tol=0.0367
2023-02-21 08:44:11,483 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=95.6 pTM=0.532 tol=0.0135
2023-02-21 08:44:11,484 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:44:12,373 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.9 pTM=0.49
2023-02-21 08:44:13,258 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=95.2 pTM=0.523 tol=0.192
2023-02-21 08:44:14,142 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.4 pTM=0.523 tol=0.0427
2023-02-21 08:44:15,028 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.3 pTM=0.522 tol=0.0158
2023-02-21 08:44:15,028 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:15,919 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=94.1 pTM=0.511
2023-02-21 08:44:16,807 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=95.8 pTM=0.53 tol=0.125
2023-02-21 08:44:17,694 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=95.9 pTM=0.534 tol=0.0467
2023-02-21 08:44:18,581 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=95.8 pTM=0.531 tol=0.0214
2023-02-21 08:44:18,581 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:44:18,585 reranking models by 'plddt' metric
2023-02-21 08:44:18,585 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=95.8 pTM=0.531
2023-02-21 08:44:18,585 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=95.6 pTM=0.532
2023-02-21 08:44:18,585 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=95.3 pTM=0.522
2023-02-21 08:44:18,585 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.6 pTM=0.49
2023-02-21 08:44:18,585 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92.6 pTM=0.494
2023-02-21 08:44:19,279 Query 61/80: 1bh4 (length 30)
2023-02-21 08:44:21,125 Padding length to 36
2023-02-21 08:44:22,019 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.8 pTM=0.473
2023-02-21 08:44:22,900 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.4 pTM=0.468 tol=0.135
2023-02-21 08:44:23,784 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.2 pTM=0.463 tol=0.0351
2023-02-21 08:44:24,669 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.6 pTM=0.46 tol=0.0168
2023-02-21 08:44:24,669 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:25,560 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.2 pTM=0.488
2023-02-21 08:44:26,447 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.2 pTM=0.473 tol=0.106
2023-02-21 08:44:27,334 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.2 pTM=0.471 tol=0.0277
2023-02-21 08:44:28,222 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.4 pTM=0.473 tol=0.00813
2023-02-21 08:44:28,222 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:29,113 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.3 pTM=0.511
2023-02-21 08:44:30,001 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.4 pTM=0.505 tol=0.0833
2023-02-21 08:44:30,887 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.1 pTM=0.498 tol=0.0274
2023-02-21 08:44:31,775 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.9 pTM=0.496 tol=0.0142
2023-02-21 08:44:31,775 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:32,666 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.2 pTM=0.486
2023-02-21 08:44:33,551 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.3 pTM=0.488 tol=0.102
2023-02-21 08:44:34,435 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.1 pTM=0.483 tol=0.0279
2023-02-21 08:44:35,320 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.9 pTM=0.483 tol=0.0151
2023-02-21 08:44:35,320 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:36,210 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.7 pTM=0.456
2023-02-21 08:44:37,097 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=88.8 pTM=0.441 tol=0.0952
2023-02-21 08:44:37,983 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.2 pTM=0.445 tol=0.0222
2023-02-21 08:44:38,870 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88.9 pTM=0.441 tol=0.0135
2023-02-21 08:44:38,870 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:38,873 reranking models by 'plddt' metric
2023-02-21 08:44:38,874 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.9 pTM=0.496
2023-02-21 08:44:38,874 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.9 pTM=0.483
2023-02-21 08:44:38,874 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=91.4 pTM=0.473
2023-02-21 08:44:38,874 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.6 pTM=0.46
2023-02-21 08:44:38,874 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=88.9 pTM=0.441
2023-02-21 08:44:39,708 Query 62/80: 1df6 (length 30)
2023-02-21 08:44:41,565 Padding length to 36
2023-02-21 08:44:42,457 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=61.9 pTM=0.212
2023-02-21 08:44:43,345 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.221 tol=1.15
2023-02-21 08:44:44,229 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.225 tol=0.774
2023-02-21 08:44:45,113 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=66.4 pTM=0.222 tol=0.238
2023-02-21 08:44:45,114 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:46,004 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=63.3 pTM=0.238
2023-02-21 08:44:46,891 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=58.7 pTM=0.192 tol=1.29
2023-02-21 08:44:47,778 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=59.8 pTM=0.201 tol=1.27
2023-02-21 08:44:48,665 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=61.6 pTM=0.209 tol=0.345
2023-02-21 08:44:48,665 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:49,556 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.8 pTM=0.266
2023-02-21 08:44:50,443 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=69.1 pTM=0.231 tol=0.709
2023-02-21 08:44:51,329 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.1 pTM=0.289 tol=0.728
2023-02-21 08:44:52,217 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=74.9 pTM=0.316 tol=0.608
2023-02-21 08:44:52,217 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:53,105 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.2 pTM=0.228
2023-02-21 08:44:53,989 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=69.2 pTM=0.241 tol=0.986
2023-02-21 08:44:54,873 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=67.2 pTM=0.231 tol=0.447
2023-02-21 08:44:55,757 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.225 tol=0.561
2023-02-21 08:44:55,757 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:56,647 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=60.3 pTM=0.226
2023-02-21 08:44:57,534 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.7 pTM=0.229 tol=1.3
2023-02-21 08:44:58,420 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=70.5 pTM=0.28 tol=0.81
2023-02-21 08:44:59,306 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=72.4 pTM=0.309 tol=0.317
2023-02-21 08:44:59,306 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:44:59,310 reranking models by 'plddt' metric
2023-02-21 08:44:59,310 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=74.9 pTM=0.316
2023-02-21 08:44:59,310 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=72.4 pTM=0.309
2023-02-21 08:44:59,310 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=67.8 pTM=0.225
2023-02-21 08:44:59,310 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=66.4 pTM=0.222
2023-02-21 08:44:59,310 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=61.6 pTM=0.209
2023-02-21 08:44:59,995 Query 63/80: 1vb8 (length 30)
2023-02-21 08:45:01,980 Padding length to 36
2023-02-21 08:45:02,869 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.9 pTM=0.342
2023-02-21 08:45:03,751 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.1 pTM=0.422 tol=0.362
2023-02-21 08:45:04,635 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87 pTM=0.432 tol=0.062
2023-02-21 08:45:05,520 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87.4 pTM=0.436 tol=0.0329
2023-02-21 08:45:05,520 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:06,411 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.9 pTM=0.377
2023-02-21 08:45:07,298 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.1 pTM=0.435 tol=0.442
2023-02-21 08:45:08,185 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.1 pTM=0.443 tol=0.0881
2023-02-21 08:45:09,072 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.4 pTM=0.444 tol=0.0258
2023-02-21 08:45:09,072 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:09,962 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88 pTM=0.452
2023-02-21 08:45:10,849 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.8 pTM=0.482 tol=0.221
2023-02-21 08:45:11,736 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.2 pTM=0.483 tol=0.0483
2023-02-21 08:45:12,623 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.4 pTM=0.484 tol=0.0234
2023-02-21 08:45:12,623 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:13,512 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.7 pTM=0.438
2023-02-21 08:45:14,396 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.8 pTM=0.46 tol=0.19
2023-02-21 08:45:15,280 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.8 pTM=0.47 tol=0.0615
2023-02-21 08:45:16,165 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.9 pTM=0.471 tol=0.018
2023-02-21 08:45:16,165 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:17,055 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.3 pTM=0.436
2023-02-21 08:45:17,942 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=88.2 pTM=0.449 tol=0.196
2023-02-21 08:45:18,829 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.2 pTM=0.458 tol=0.0455
2023-02-21 08:45:19,715 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.9 pTM=0.462 tol=0.0216
2023-02-21 08:45:19,716 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:19,719 reranking models by 'plddt' metric
2023-02-21 08:45:19,719 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.4 pTM=0.484
2023-02-21 08:45:19,719 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.9 pTM=0.471
2023-02-21 08:45:19,719 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.9 pTM=0.462
2023-02-21 08:45:19,719 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88.4 pTM=0.444
2023-02-21 08:45:19,719 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=87.4 pTM=0.436
2023-02-21 08:45:20,397 Query 64/80: 2knm (length 30)
2023-02-21 08:45:22,248 Padding length to 36
2023-02-21 08:45:23,148 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.6 pTM=0.452
2023-02-21 08:45:24,032 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.4 pTM=0.458 tol=0.135
2023-02-21 08:45:24,916 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.4 pTM=0.454 tol=0.0297
2023-02-21 08:45:25,801 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.1 pTM=0.454 tol=0.0121
2023-02-21 08:45:25,801 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:45:26,691 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.5 pTM=0.447
2023-02-21 08:45:27,578 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.8 pTM=0.453 tol=0.122
2023-02-21 08:45:28,464 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.8 pTM=0.452 tol=0.0233
2023-02-21 08:45:29,352 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.9 pTM=0.452 tol=0.0114
2023-02-21 08:45:29,352 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:30,243 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.9 pTM=0.489
2023-02-21 08:45:31,130 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93 pTM=0.502 tol=0.087
2023-02-21 08:45:32,017 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.498 tol=0.0236
2023-02-21 08:45:32,904 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93 pTM=0.498 tol=0.0123
2023-02-21 08:45:32,904 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:33,792 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.2 pTM=0.454
2023-02-21 08:45:34,677 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.9 pTM=0.467 tol=0.0975
2023-02-21 08:45:35,561 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.1 pTM=0.467 tol=0.0248
2023-02-21 08:45:36,445 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.1 pTM=0.468 tol=0.00941
2023-02-21 08:45:36,445 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:37,335 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.466
2023-02-21 08:45:38,222 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.3 pTM=0.471 tol=0.071
2023-02-21 08:45:39,109 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.4 pTM=0.471 tol=0.0216
2023-02-21 08:45:39,995 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.471 tol=0.0105
2023-02-21 08:45:39,996 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:39,999 reranking models by 'plddt' metric
2023-02-21 08:45:39,999 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93 pTM=0.498
2023-02-21 08:45:39,999 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.471
2023-02-21 08:45:39,999 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.1 pTM=0.468
2023-02-21 08:45:39,999 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=89.9 pTM=0.452
2023-02-21 08:45:39,999 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=89.1 pTM=0.454
2023-02-21 08:45:40,835 Query 65/80: 2kuk (length 30)
2023-02-21 08:45:42,695 Padding length to 36
2023-02-21 08:45:43,590 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87 pTM=0.451
2023-02-21 08:45:44,473 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.497 tol=0.258
2023-02-21 08:45:45,357 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.5 pTM=0.508 tol=0.0591
2023-02-21 08:45:46,242 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.7 pTM=0.508 tol=0.0279
2023-02-21 08:45:46,242 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:47,133 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.1 pTM=0.455
2023-02-21 08:45:48,021 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.4 pTM=0.461 tol=0.177
2023-02-21 08:45:48,907 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.6 pTM=0.462 tol=0.113
2023-02-21 08:45:49,795 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.4 pTM=0.46 tol=0.032
2023-02-21 08:45:49,795 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:50,685 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.519
2023-02-21 08:45:51,573 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.4 pTM=0.533 tol=0.295
2023-02-21 08:45:52,459 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.6 pTM=0.544 tol=0.0945
2023-02-21 08:45:53,347 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.9 pTM=0.548 tol=0.0346
2023-02-21 08:45:53,347 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:54,235 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87 pTM=0.444
2023-02-21 08:45:55,119 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=87.6 pTM=0.461 tol=0.324
2023-02-21 08:45:56,003 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.3 pTM=0.488 tol=0.767
2023-02-21 08:45:56,888 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.9 pTM=0.503 tol=0.0668
2023-02-21 08:45:56,888 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:45:57,779 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.3 pTM=0.48
2023-02-21 08:45:58,666 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.4 pTM=0.516 tol=0.352
2023-02-21 08:45:59,552 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.8 pTM=0.533 tol=0.0627
2023-02-21 08:46:00,439 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.3 pTM=0.539 tol=0.0245
2023-02-21 08:46:00,440 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:00,443 reranking models by 'plddt' metric
2023-02-21 08:46:00,443 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=94.9 pTM=0.548
2023-02-21 08:46:00,443 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=94.3 pTM=0.539
2023-02-21 08:46:00,443 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=92.9 pTM=0.503
2023-02-21 08:46:00,443 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.7 pTM=0.508
2023-02-21 08:46:00,443 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=86.4 pTM=0.46
2023-02-21 08:46:01,136 Query 66/80: 2kux (length 30)
2023-02-21 08:46:03,014 Padding length to 36
2023-02-21 08:46:03,915 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.2 pTM=0.469
2023-02-21 08:46:04,798 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.1 pTM=0.478 tol=0.126
2023-02-21 08:46:05,681 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.9 pTM=0.474 tol=0.0305
2023-02-21 08:46:06,566 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.9 pTM=0.474 tol=0.0119
2023-02-21 08:46:06,566 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:46:07,456 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.4 pTM=0.479
2023-02-21 08:46:08,343 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.9 pTM=0.48 tol=0.103
2023-02-21 08:46:09,230 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.8 pTM=0.477 tol=0.0242
2023-02-21 08:46:10,117 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.478 tol=0.00856
2023-02-21 08:46:10,117 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:11,008 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.491
2023-02-21 08:46:11,895 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.4 pTM=0.503 tol=0.0865
2023-02-21 08:46:12,782 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.3 pTM=0.501 tol=0.0284
2023-02-21 08:46:13,669 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.4 pTM=0.502 tol=0.017
2023-02-21 08:46:13,669 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:14,557 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.6 pTM=0.461
2023-02-21 08:46:15,442 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.8 pTM=0.478 tol=0.109
2023-02-21 08:46:16,326 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.8 pTM=0.479 tol=0.0239
2023-02-21 08:46:17,214 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92 pTM=0.48 tol=0.0116
2023-02-21 08:46:17,214 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:18,104 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.4 pTM=0.486
2023-02-21 08:46:18,992 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.2 pTM=0.492 tol=0.0789
2023-02-21 08:46:19,878 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.4 pTM=0.493 tol=0.0285
2023-02-21 08:46:20,765 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.4 pTM=0.493 tol=0.00866
2023-02-21 08:46:20,765 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:20,769 reranking models by 'plddt' metric
2023-02-21 08:46:20,769 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.4 pTM=0.493
2023-02-21 08:46:20,769 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=93.4 pTM=0.502
2023-02-21 08:46:20,769 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=92 pTM=0.48
2023-02-21 08:46:20,769 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.478
2023-02-21 08:46:20,769 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.9 pTM=0.474
2023-02-21 08:46:21,615 Query 67/80: 2mn1 (length 30)
2023-02-21 08:46:23,490 Padding length to 36
2023-02-21 08:46:24,385 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.2 pTM=0.472
2023-02-21 08:46:25,267 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89 pTM=0.474 tol=0.199
2023-02-21 08:46:26,151 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.2 pTM=0.473 tol=0.152
2023-02-21 08:46:27,036 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.8 pTM=0.471 tol=0.0338
2023-02-21 08:46:27,036 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:27,927 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.2 pTM=0.503
2023-02-21 08:46:28,814 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.9 pTM=0.504 tol=0.14
2023-02-21 08:46:29,701 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.6 pTM=0.501 tol=0.0526
2023-02-21 08:46:30,589 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.4 pTM=0.499 tol=0.0367
2023-02-21 08:46:30,589 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:31,480 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.4 pTM=0.533
2023-02-21 08:46:32,367 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93 pTM=0.534 tol=0.218
2023-02-21 08:46:33,254 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.5 pTM=0.536 tol=0.0551
2023-02-21 08:46:34,142 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.6 pTM=0.535 tol=0.0221
2023-02-21 08:46:34,142 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:35,035 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.8 pTM=0.508
2023-02-21 08:46:35,920 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.8 pTM=0.527 tol=0.23
2023-02-21 08:46:36,804 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.9 pTM=0.529 tol=0.0703
2023-02-21 08:46:37,689 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94 pTM=0.529 tol=0.0265
2023-02-21 08:46:37,689 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:38,580 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.9 pTM=0.526
2023-02-21 08:46:39,468 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.7 pTM=0.536 tol=0.163
2023-02-21 08:46:40,354 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.537 tol=0.0603
2023-02-21 08:46:41,242 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94 pTM=0.538 tol=0.0199
2023-02-21 08:46:41,242 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:41,245 reranking models by 'plddt' metric
2023-02-21 08:46:41,245 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=94 pTM=0.538
2023-02-21 08:46:41,245 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=94 pTM=0.529
2023-02-21 08:46:41,245 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=93.6 pTM=0.535
2023-02-21 08:46:41,245 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.4 pTM=0.499
2023-02-21 08:46:41,245 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.8 pTM=0.471
2023-02-21 08:46:41,925 Query 68/80: 2mso (length 30)
2023-02-21 08:46:43,914 Padding length to 36
2023-02-21 08:46:44,806 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.8 pTM=0.261
2023-02-21 08:46:45,687 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=62.4 pTM=0.228 tol=0.905
2023-02-21 08:46:46,571 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.243 tol=0.716
2023-02-21 08:46:47,456 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.228 tol=0.412
2023-02-21 08:46:47,456 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:48,349 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=70.9 pTM=0.292
2023-02-21 08:46:49,237 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=61 pTM=0.233 tol=0.933
2023-02-21 08:46:50,124 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=61.5 pTM=0.242 tol=0.571
2023-02-21 08:46:51,092 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=60.9 pTM=0.244 tol=0.829
2023-02-21 08:46:51,092 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:46:51,983 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.2 pTM=0.296
2023-02-21 08:46:52,870 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=80.9 pTM=0.369 tol=0.831
2023-02-21 08:46:53,757 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=81.6 pTM=0.361 tol=0.493
2023-02-21 08:46:54,644 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81.2 pTM=0.363 tol=0.0684
2023-02-21 08:46:54,644 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:55,531 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74.5 pTM=0.303
2023-02-21 08:46:56,416 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=79.4 pTM=0.356 tol=0.668
2023-02-21 08:46:57,299 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=80 pTM=0.364 tol=0.107
2023-02-21 08:46:58,184 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=78.5 pTM=0.356 tol=0.117
2023-02-21 08:46:58,184 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:46:59,074 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=66.2 pTM=0.246
2023-02-21 08:46:59,961 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=62.4 pTM=0.216 tol=0.653
2023-02-21 08:47:00,847 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=62.4 pTM=0.216 tol=0.454
2023-02-21 08:47:01,734 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=61.4 pTM=0.21 tol=0.151
2023-02-21 08:47:01,734 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:01,737 reranking models by 'plddt' metric
2023-02-21 08:47:01,737 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=81.2 pTM=0.363
2023-02-21 08:47:01,737 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=78.5 pTM=0.356
2023-02-21 08:47:01,737 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=62.2 pTM=0.228
2023-02-21 08:47:01,737 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=61.4 pTM=0.21
2023-02-21 08:47:01,737 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=60.9 pTM=0.244
2023-02-21 08:47:02,419 Query 69/80: 7rn3 (length 30)
2023-02-21 08:47:04,253 Padding length to 36
2023-02-21 08:47:05,153 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.1 pTM=0.459
2023-02-21 08:47:06,036 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.9 pTM=0.463 tol=0.117
2023-02-21 08:47:06,920 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.464 tol=0.0319
2023-02-21 08:47:07,805 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.9 pTM=0.462 tol=0.0202
2023-02-21 08:47:07,805 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:47:08,696 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.1 pTM=0.456
2023-02-21 08:47:09,583 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.9 pTM=0.457 tol=0.108
2023-02-21 08:47:10,474 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90 pTM=0.455 tol=0.0249
2023-02-21 08:47:11,362 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90 pTM=0.454 tol=0.00935
2023-02-21 08:47:11,362 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:47:12,253 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.8 pTM=0.484
2023-02-21 08:47:13,140 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.8 pTM=0.495 tol=0.0825
2023-02-21 08:47:14,026 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.7 pTM=0.492 tol=0.031
2023-02-21 08:47:14,917 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.9 pTM=0.492 tol=0.0159
2023-02-21 08:47:14,917 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:47:15,805 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.9 pTM=0.452
2023-02-21 08:47:16,690 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.9 pTM=0.468 tol=0.0939
2023-02-21 08:47:17,574 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91 pTM=0.468 tol=0.0271
2023-02-21 08:47:18,462 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.1 pTM=0.469 tol=0.011
2023-02-21 08:47:18,462 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:19,352 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.1 pTM=0.459
2023-02-21 08:47:20,239 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.1 pTM=0.467 tol=0.0903
2023-02-21 08:47:21,125 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.5 pTM=0.469 tol=0.0209
2023-02-21 08:47:22,012 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.47 tol=0.0117
2023-02-21 08:47:22,012 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:22,015 reranking models by 'plddt' metric
2023-02-21 08:47:22,015 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.9 pTM=0.492
2023-02-21 08:47:22,015 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.47
2023-02-21 08:47:22,015 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.1 pTM=0.469
2023-02-21 08:47:22,016 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90 pTM=0.454
2023-02-21 08:47:22,016 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=89.9 pTM=0.462
2023-02-21 08:47:22,835 Query 70/80: 1za8 (length 31)
2023-02-21 08:47:24,708 Padding length to 36
2023-02-21 08:47:25,602 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.8 pTM=0.43
2023-02-21 08:47:26,487 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86 pTM=0.454 tol=0.183
2023-02-21 08:47:27,371 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.9 pTM=0.451 tol=0.148
2023-02-21 08:47:28,255 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86 pTM=0.451 tol=0.0296
2023-02-21 08:47:28,255 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:29,146 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.9 pTM=0.455
2023-02-21 08:47:30,034 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.8 pTM=0.465 tol=0.424
2023-02-21 08:47:30,920 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.6 pTM=0.461 tol=0.125
2023-02-21 08:47:31,807 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.6 pTM=0.46 tol=0.0426
2023-02-21 08:47:31,807 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:32,698 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.4 pTM=0.483
2023-02-21 08:47:33,585 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.7 pTM=0.489 tol=0.263
2023-02-21 08:47:34,472 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91 pTM=0.494 tol=0.0829
2023-02-21 08:47:35,359 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.9 pTM=0.498 tol=0.0486
2023-02-21 08:47:35,359 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:36,247 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.6 pTM=0.476
2023-02-21 08:47:37,132 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88.7 pTM=0.48 tol=0.48
2023-02-21 08:47:38,015 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=89.8 pTM=0.486 tol=0.1
2023-02-21 08:47:38,900 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=89.9 pTM=0.487 tol=0.0248
2023-02-21 08:47:38,900 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 08:47:39,790 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88 pTM=0.479
2023-02-21 08:47:40,678 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.9 pTM=0.492 tol=0.266
2023-02-21 08:47:41,572 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.8 pTM=0.498 tol=0.123
2023-02-21 08:47:42,500 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.502 tol=0.06
2023-02-21 08:47:42,500 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:47:42,504 reranking models by 'plddt' metric
2023-02-21 08:47:42,504 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.9 pTM=0.498
2023-02-21 08:47:42,504 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.502
2023-02-21 08:47:42,504 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=89.9 pTM=0.487
2023-02-21 08:47:42,504 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.6 pTM=0.46
2023-02-21 08:47:42,504 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86 pTM=0.451
2023-02-21 08:47:43,479 Query 71/80: 2b38 (length 31)
2023-02-21 08:47:45,592 Padding length to 36
2023-02-21 08:47:46,568 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.3 pTM=0.464
2023-02-21 08:47:47,528 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.4 pTM=0.509 tol=0.258
2023-02-21 08:47:48,466 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.1 pTM=0.516 tol=0.0464
2023-02-21 08:47:49,458 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.7 pTM=0.521 tol=0.0263
2023-02-21 08:47:49,459 alphafold2_ptm_model_1_seed_000 took 3.9s (3 recycles)
2023-02-21 08:47:50,410 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=84.1 pTM=0.46
2023-02-21 08:47:51,403 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.2 pTM=0.522 tol=0.851
2023-02-21 08:47:52,348 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.4 pTM=0.532 tol=0.0954
2023-02-21 08:47:53,264 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92 pTM=0.537 tol=0.0376
2023-02-21 08:47:53,265 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:47:54,197 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88.8 pTM=0.511
2023-02-21 08:47:55,140 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93 pTM=0.549 tol=0.158
2023-02-21 08:47:56,052 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.9 pTM=0.553 tol=0.0589
2023-02-21 08:47:56,983 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.9 pTM=0.552 tol=0.0231
2023-02-21 08:47:56,983 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:47:57,900 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.8 pTM=0.469
2023-02-21 08:47:58,818 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85.9 pTM=0.475 tol=0.196
2023-02-21 08:47:59,750 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.1 pTM=0.477 tol=0.0535
2023-02-21 08:48:00,665 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86 pTM=0.475 tol=0.0304
2023-02-21 08:48:00,665 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:48:01,595 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.4 pTM=0.507
2023-02-21 08:48:02,532 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.8 pTM=0.5 tol=0.374
2023-02-21 08:48:03,438 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.9 pTM=0.497 tol=0.0694
2023-02-21 08:48:04,354 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87.1 pTM=0.499 tol=0.0329
2023-02-21 08:48:04,354 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:48:04,358 reranking models by 'plddt' metric
2023-02-21 08:48:04,358 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.9 pTM=0.552
2023-02-21 08:48:04,359 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=92 pTM=0.537
2023-02-21 08:48:04,359 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=90.7 pTM=0.521
2023-02-21 08:48:04,359 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=87.1 pTM=0.499
2023-02-21 08:48:04,359 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=86 pTM=0.475
2023-02-21 08:48:05,963 Query 72/80: 2eri (length 31)
2023-02-21 08:48:08,133 Padding length to 36
2023-02-21 08:48:09,077 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89 pTM=0.471
2023-02-21 08:48:09,997 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.6 pTM=0.455 tol=0.108
2023-02-21 08:48:10,912 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87.8 pTM=0.454 tol=0.0338
2023-02-21 08:48:11,825 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87.5 pTM=0.454 tol=0.0179
2023-02-21 08:48:11,825 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 08:48:12,757 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.1 pTM=0.513
2023-02-21 08:48:13,666 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.8 pTM=0.49 tol=0.119
2023-02-21 08:48:14,567 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.7 pTM=0.488 tol=0.0247
2023-02-21 08:48:15,471 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.8 pTM=0.488 tol=0.00944
2023-02-21 08:48:15,472 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:16,377 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.515
2023-02-21 08:48:17,281 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.6 pTM=0.513 tol=0.0995
2023-02-21 08:48:18,181 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.3 pTM=0.509 tol=0.0333
2023-02-21 08:48:19,085 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.5 pTM=0.509 tol=0.0192
2023-02-21 08:48:19,085 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:19,988 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.2 pTM=0.493
2023-02-21 08:48:20,891 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.5 pTM=0.5 tol=0.0936
2023-02-21 08:48:21,787 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.4 pTM=0.494 tol=0.0301
2023-02-21 08:48:22,689 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.5 pTM=0.495 tol=0.0119
2023-02-21 08:48:22,689 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:23,593 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.487
2023-02-21 08:48:24,499 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.5 pTM=0.486 tol=0.0795
2023-02-21 08:48:25,400 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.6 pTM=0.485 tol=0.0312
2023-02-21 08:48:26,303 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.7 pTM=0.484 tol=0.0138
2023-02-21 08:48:26,303 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:26,307 reranking models by 'plddt' metric
2023-02-21 08:48:26,307 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.5 pTM=0.509
2023-02-21 08:48:26,307 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.5 pTM=0.495
2023-02-21 08:48:26,307 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=90.8 pTM=0.488
2023-02-21 08:48:26,307 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=90.7 pTM=0.484
2023-02-21 08:48:26,307 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=87.5 pTM=0.454
2023-02-21 08:48:27,099 Query 73/80: 2gj0 (length 31)
2023-02-21 08:48:29,466 Padding length to 36
2023-02-21 08:48:30,382 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.2 pTM=0.408
2023-02-21 08:48:31,283 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.4 pTM=0.413 tol=0.297
2023-02-21 08:48:32,182 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=81.7 pTM=0.42 tol=0.111
2023-02-21 08:48:33,085 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=81.5 pTM=0.417 tol=0.064
2023-02-21 08:48:33,085 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:33,990 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=80.6 pTM=0.417
2023-02-21 08:48:34,895 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.2 pTM=0.411 tol=0.346
2023-02-21 08:48:35,794 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=80.9 pTM=0.422 tol=0.166
2023-02-21 08:48:36,700 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=80.1 pTM=0.416 tol=0.0919
2023-02-21 08:48:36,700 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:37,607 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88.1 pTM=0.496
2023-02-21 08:48:38,509 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.9 pTM=0.479 tol=0.221
2023-02-21 08:48:39,417 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.5 pTM=0.485 tol=0.0873
2023-02-21 08:48:40,330 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=87.4 pTM=0.482 tol=0.024
2023-02-21 08:48:40,330 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:41,236 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.4 pTM=0.448
2023-02-21 08:48:42,137 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=87 pTM=0.477 tol=0.299
2023-02-21 08:48:43,034 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.8 pTM=0.478 tol=0.0682
2023-02-21 08:48:43,934 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.8 pTM=0.476 tol=0.0405
2023-02-21 08:48:43,935 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:44,839 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.9 pTM=0.479
2023-02-21 08:48:45,741 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.2 pTM=0.497 tol=0.117
2023-02-21 08:48:46,644 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.7 pTM=0.5 tol=0.0398
2023-02-21 08:48:47,549 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.5 pTM=0.5 tol=0.0191
2023-02-21 08:48:47,549 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:47,552 reranking models by 'plddt' metric
2023-02-21 08:48:47,552 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=89.5 pTM=0.5
2023-02-21 08:48:47,552 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=87.4 pTM=0.482
2023-02-21 08:48:47,553 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.8 pTM=0.476
2023-02-21 08:48:47,553 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=81.5 pTM=0.417
2023-02-21 08:48:47,553 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=80.1 pTM=0.416
2023-02-21 08:48:48,353 Query 74/80: 7s55 (length 31)
2023-02-21 08:48:50,388 Padding length to 36
2023-02-21 08:48:51,309 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87.3 pTM=0.462
2023-02-21 08:48:52,208 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.5 pTM=0.473 tol=0.124
2023-02-21 08:48:53,101 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.8 pTM=0.473 tol=0.042
2023-02-21 08:48:54,001 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.9 pTM=0.473 tol=0.0216
2023-02-21 08:48:54,001 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:54,911 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.1 pTM=0.469
2023-02-21 08:48:55,815 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.2 pTM=0.469 tol=0.132
2023-02-21 08:48:56,712 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.8 pTM=0.462 tol=0.0423
2023-02-21 08:48:57,614 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.6 pTM=0.459 tol=0.0124
2023-02-21 08:48:57,614 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:48:58,520 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90.9 pTM=0.506
2023-02-21 08:48:59,424 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.9 pTM=0.525 tol=0.107
2023-02-21 08:49:00,323 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.523 tol=0.0334
2023-02-21 08:49:01,225 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.2 pTM=0.524 tol=0.0192
2023-02-21 08:49:01,225 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:02,126 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.5 pTM=0.461
2023-02-21 08:49:03,026 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.9 pTM=0.497 tol=0.146
2023-02-21 08:49:03,924 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.4 pTM=0.5 tol=0.0371
2023-02-21 08:49:04,823 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.8 pTM=0.503 tol=0.016
2023-02-21 08:49:04,823 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:05,725 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.8 pTM=0.513
2023-02-21 08:49:06,629 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.2 pTM=0.512 tol=0.0859
2023-02-21 08:49:07,528 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.4 pTM=0.512 tol=0.0305
2023-02-21 08:49:08,429 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.4 pTM=0.512 tol=0.0195
2023-02-21 08:49:08,429 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:08,432 reranking models by 'plddt' metric
2023-02-21 08:49:08,432 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.2 pTM=0.524
2023-02-21 08:49:08,432 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=92.4 pTM=0.512
2023-02-21 08:49:08,432 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.8 pTM=0.503
2023-02-21 08:49:08,433 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.9 pTM=0.473
2023-02-21 08:49:08,433 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.6 pTM=0.459
2023-02-21 08:49:09,635 Query 75/80: 2mh1 (length 33)
2023-02-21 08:49:11,695 Padding length to 36
2023-02-21 08:49:12,621 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.9 pTM=0.486
2023-02-21 08:49:13,519 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=83.1 pTM=0.483 tol=0.206
2023-02-21 08:49:14,466 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=82.4 pTM=0.478 tol=0.0793
2023-02-21 08:49:15,366 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=81.9 pTM=0.475 tol=0.0462
2023-02-21 08:49:15,366 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 08:49:16,270 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.1 pTM=0.459
2023-02-21 08:49:17,170 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=80.4 pTM=0.464 tol=0.269
2023-02-21 08:49:18,067 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=80.2 pTM=0.463 tol=0.0685
2023-02-21 08:49:18,967 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=80.1 pTM=0.463 tol=0.0292
2023-02-21 08:49:18,967 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:19,869 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.7 pTM=0.505
2023-02-21 08:49:20,768 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=84.9 pTM=0.516 tol=0.629
2023-02-21 08:49:21,664 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=85.7 pTM=0.521 tol=0.149
2023-02-21 08:49:22,564 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=86.5 pTM=0.53 tol=0.122
2023-02-21 08:49:22,564 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:23,463 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=83.6 pTM=0.495
2023-02-21 08:49:24,360 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.3 pTM=0.512 tol=0.354
2023-02-21 08:49:25,261 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=84.4 pTM=0.51 tol=0.083
2023-02-21 08:49:26,159 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.4 pTM=0.51 tol=0.0324
2023-02-21 08:49:26,159 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:27,064 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.6 pTM=0.494
2023-02-21 08:49:27,964 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=83 pTM=0.494 tol=0.147
2023-02-21 08:49:28,861 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.8 pTM=0.496 tol=0.237
2023-02-21 08:49:29,759 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=84.2 pTM=0.499 tol=0.113
2023-02-21 08:49:29,759 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:49:29,763 reranking models by 'plddt' metric
2023-02-21 08:49:29,763 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=86.5 pTM=0.53
2023-02-21 08:49:29,763 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=84.4 pTM=0.51
2023-02-21 08:49:29,763 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=84.2 pTM=0.499
2023-02-21 08:49:29,763 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=81.9 pTM=0.475
2023-02-21 08:49:29,763 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=80.1 pTM=0.463
2023-02-21 08:49:30,536 Query 76/80: 2po8 (length 34)
2023-02-21 08:49:31,137 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:49:41,754 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:49:52,415 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:49:59,816 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:50:06,466 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:50:12,084 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:50:21,124 Padding length to 36
2023-02-21 08:50:22,061 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.4 pTM=0.468
2023-02-21 08:50:22,964 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=81.6 pTM=0.475 tol=0.221
2023-02-21 08:50:23,858 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=81.9 pTM=0.479 tol=0.0459
2023-02-21 08:50:24,754 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.2 pTM=0.481 tol=0.0166
2023-02-21 08:50:24,754 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:50:25,659 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.1 pTM=0.479
2023-02-21 08:50:26,562 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=83.7 pTM=0.499 tol=0.275
2023-02-21 08:50:27,459 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=84.5 pTM=0.507 tol=0.0569
2023-02-21 08:50:28,435 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.7 pTM=0.508 tol=0.0211
2023-02-21 08:50:28,435 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:50:29,464 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.5 pTM=0.495
2023-02-21 08:50:30,368 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=84 pTM=0.503 tol=0.163
2023-02-21 08:50:31,266 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=84 pTM=0.5 tol=0.0647
2023-02-21 08:50:32,168 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=84.1 pTM=0.501 tol=0.0234
2023-02-21 08:50:32,168 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:50:33,069 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.2 pTM=0.535
2023-02-21 08:50:33,968 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.5 pTM=0.538 tol=0.142
2023-02-21 08:50:34,862 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.8 pTM=0.529 tol=0.0369
2023-02-21 08:50:35,759 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.1 pTM=0.527 tol=0.0175
2023-02-21 08:50:35,759 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:50:36,666 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=84.2 pTM=0.511
2023-02-21 08:50:37,569 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=85.9 pTM=0.534 tol=0.122
2023-02-21 08:50:38,466 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86 pTM=0.534 tol=0.0495
2023-02-21 08:50:39,365 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.2 pTM=0.537 tol=0.0301
2023-02-21 08:50:39,365 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:50:39,369 reranking models by 'plddt' metric
2023-02-21 08:50:39,369 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=86.2 pTM=0.537
2023-02-21 08:50:39,369 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=86.1 pTM=0.527
2023-02-21 08:50:39,369 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=84.7 pTM=0.508
2023-02-21 08:50:39,369 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=84.1 pTM=0.501
2023-02-21 08:50:39,369 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=82.2 pTM=0.481
2023-02-21 08:50:41,372 Query 77/80: 5wov (length 34)
2023-02-21 08:50:41,974 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:50:49,576 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:50:55,200 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:51:03,826 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:51:10,447 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:51:18,062 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:51:26,677 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:51:33,296 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:51:39,902 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:51:51,407 Padding length to 36
2023-02-21 08:51:52,353 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=79.3 pTM=0.451
2023-02-21 08:51:53,256 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80 pTM=0.445 tol=0.317
2023-02-21 08:51:54,152 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=81.8 pTM=0.462 tol=0.1
2023-02-21 08:51:55,052 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=81.8 pTM=0.456 tol=0.0668
2023-02-21 08:51:55,052 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 08:51:55,958 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=83.2 pTM=0.49
2023-02-21 08:51:56,862 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.7 pTM=0.483 tol=0.391
2023-02-21 08:51:57,761 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=84.8 pTM=0.507 tol=0.0687
2023-02-21 08:51:58,665 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85.4 pTM=0.513 tol=0.0803
2023-02-21 08:51:58,665 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 08:51:59,592 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.7 pTM=0.469
2023-02-21 08:52:00,570 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81.6 pTM=0.468 tol=0.354
2023-02-21 08:52:01,580 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=83.4 pTM=0.497 tol=0.243
2023-02-21 08:52:02,492 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=84.7 pTM=0.504 tol=0.084
2023-02-21 08:52:02,493 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:52:03,396 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=82.2 pTM=0.472
2023-02-21 08:52:04,296 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.4 pTM=0.509 tol=0.21
2023-02-21 08:52:05,205 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.8 pTM=0.518 tol=0.084
2023-02-21 08:52:06,106 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=87.1 pTM=0.52 tol=0.0743
2023-02-21 08:52:06,106 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 08:52:07,013 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=79.9 pTM=0.445
2023-02-21 08:52:07,915 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=81.8 pTM=0.453 tol=0.314
2023-02-21 08:52:08,813 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.9 pTM=0.486 tol=0.107
2023-02-21 08:52:09,717 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=83.3 pTM=0.47 tol=0.0723
2023-02-21 08:52:09,717 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 08:52:09,726 reranking models by 'plddt' metric
2023-02-21 08:52:09,726 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=87.1 pTM=0.52
2023-02-21 08:52:09,726 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=85.4 pTM=0.513
2023-02-21 08:52:09,726 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=84.7 pTM=0.504
2023-02-21 08:52:09,726 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=83.3 pTM=0.47
2023-02-21 08:52:09,726 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=81.8 pTM=0.456
2023-02-21 08:52:10,536 Query 78/80: 1r1f (length 37)
2023-02-21 08:52:11,127 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:52:18,728 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:52:28,338 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:52:35,965 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:52:41,588 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:52:51,215 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:52:56,834 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:53:05,454 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:53:16,054 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:53:28,440 Padding length to 39
2023-02-21 08:53:45,303 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=55.2 pTM=0.237
2023-02-21 08:53:46,234 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=70.2 pTM=0.399 tol=1.6
2023-02-21 08:53:47,157 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.4 pTM=0.49 tol=0.636
2023-02-21 08:53:48,153 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.6 pTM=0.503 tol=0.192
2023-02-21 08:53:48,154 alphafold2_ptm_model_1_seed_000 took 19.7s (3 recycles)
2023-02-21 08:53:49,191 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=59.2 pTM=0.296
2023-02-21 08:53:50,121 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=68.8 pTM=0.398 tol=1.69
2023-02-21 08:53:51,044 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=78.9 pTM=0.488 tol=0.513
2023-02-21 08:53:51,967 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.8 pTM=0.529 tol=0.151
2023-02-21 08:53:51,967 alphafold2_ptm_model_2_seed_000 took 3.8s (3 recycles)
2023-02-21 08:53:52,895 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=78.6 pTM=0.432
2023-02-21 08:53:53,819 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81.3 pTM=0.469 tol=1
2023-02-21 08:53:54,740 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.9 pTM=0.483 tol=0.097
2023-02-21 08:53:55,672 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=84 pTM=0.492 tol=0.0443
2023-02-21 08:53:55,673 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:53:56,600 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=70.1 pTM=0.362
2023-02-21 08:53:57,526 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=72.7 pTM=0.411 tol=0.879
2023-02-21 08:53:58,444 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.2 pTM=0.413 tol=0.123
2023-02-21 08:53:59,391 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74 pTM=0.422 tol=0.0466
2023-02-21 08:53:59,391 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:54:00,488 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.326
2023-02-21 08:54:01,424 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.8 pTM=0.464 tol=1.03
2023-02-21 08:54:02,348 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.7 pTM=0.521 tol=0.181
2023-02-21 08:54:03,273 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=85.5 pTM=0.544 tol=0.0479
2023-02-21 08:54:03,273 alphafold2_ptm_model_5_seed_000 took 3.9s (3 recycles)
2023-02-21 08:54:03,278 reranking models by 'plddt' metric
2023-02-21 08:54:03,278 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=85.5 pTM=0.544
2023-02-21 08:54:03,278 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=84 pTM=0.492
2023-02-21 08:54:03,278 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=82.8 pTM=0.529
2023-02-21 08:54:03,278 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=82.6 pTM=0.503
2023-02-21 08:54:03,278 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=74 pTM=0.422
2023-02-21 08:54:04,133 Query 79/80: 2mt8 (length 39)
2023-02-21 08:54:04,741 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 08:54:12,373 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:54:22,990 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:54:28,592 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:54:35,227 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:54:41,824 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 08:54:52,794 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.2 pTM=0.432
2023-02-21 08:54:53,723 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.9 pTM=0.406 tol=0.725
2023-02-21 08:54:54,650 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=68.9 pTM=0.407 tol=0.112
2023-02-21 08:54:55,577 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=69 pTM=0.404 tol=0.0978
2023-02-21 08:54:55,577 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 08:54:56,523 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=68.9 pTM=0.42
2023-02-21 08:54:57,529 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.397 tol=0.516
2023-02-21 08:54:58,537 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.8 pTM=0.395 tol=0.294
2023-02-21 08:54:59,466 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.2 pTM=0.398 tol=0.212
2023-02-21 08:54:59,466 alphafold2_ptm_model_2_seed_000 took 3.9s (3 recycles)
2023-02-21 08:55:00,398 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.8 pTM=0.445
2023-02-21 08:55:01,329 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=73.3 pTM=0.428 tol=0.498
2023-02-21 08:55:02,252 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.9 pTM=0.437 tol=0.235
2023-02-21 08:55:03,180 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=76.1 pTM=0.446 tol=0.181
2023-02-21 08:55:03,180 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 08:55:04,114 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=69.8 pTM=0.412
2023-02-21 08:55:05,042 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=69.9 pTM=0.395 tol=0.548
2023-02-21 08:55:05,965 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=70.4 pTM=0.394 tol=0.199
2023-02-21 08:55:06,890 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=70.5 pTM=0.393 tol=0.0281
2023-02-21 08:55:06,890 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 08:55:07,819 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.404
2023-02-21 08:55:08,782 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=71.1 pTM=0.401 tol=0.754
2023-02-21 08:55:09,853 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.5 pTM=0.428 tol=0.376
2023-02-21 08:55:10,799 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=76.1 pTM=0.439 tol=0.102
2023-02-21 08:55:10,799 alphafold2_ptm_model_5_seed_000 took 3.9s (3 recycles)
2023-02-21 08:55:10,805 reranking models by 'plddt' metric
2023-02-21 08:55:10,805 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=76.1 pTM=0.439
2023-02-21 08:55:10,805 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=76.1 pTM=0.446
2023-02-21 08:55:10,805 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=70.5 pTM=0.393
2023-02-21 08:55:10,805 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=69 pTM=0.404
2023-02-21 08:55:10,805 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=67.2 pTM=0.398
2023-02-21 08:55:12,013 Query 80/80: 5wow (length 39)
2023-02-21 08:55:12,621 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:55:18,250 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:55:24,866 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 08:55:35,470 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:55:41,073 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:55:47,684 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:55:54,308 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:56:03,925 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 08:56:10,526 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 08:56:16,134 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 08:56:30,453 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.449
2023-02-21 08:56:31,438 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=74.9 pTM=0.469 tol=0.751
2023-02-21 08:56:32,361 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=75.3 pTM=0.47 tol=0.262
2023-02-21 08:56:33,289 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=75.6 pTM=0.473 tol=0.209
2023-02-21 08:56:33,289 alphafold2_ptm_model_1_seed_000 took 3.9s (3 recycles)
2023-02-21 08:56:34,225 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.1 pTM=0.455
2023-02-21 08:56:35,158 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=75.8 pTM=0.475 tol=0.484
2023-02-21 08:56:36,086 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=77.9 pTM=0.495 tol=0.609
2023-02-21 08:56:37,017 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=78.7 pTM=0.501 tol=0.163
2023-02-21 08:56:37,017 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 08:56:37,947 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.2 pTM=0.488
2023-02-21 08:56:38,878 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=78.9 pTM=0.506 tol=0.637
2023-02-21 08:56:39,808 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.9 pTM=0.513 tol=0.515
2023-02-21 08:56:40,797 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=79.9 pTM=0.499 tol=0.148
2023-02-21 08:56:40,798 alphafold2_ptm_model_3_seed_000 took 3.8s (3 recycles)
2023-02-21 08:56:41,789 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=76.5 pTM=0.47
2023-02-21 08:56:42,848 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=81.4 pTM=0.523 tol=0.678
2023-02-21 08:56:43,772 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.6 pTM=0.515 tol=0.239
2023-02-21 08:56:44,696 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=80.3 pTM=0.503 tol=0.14
2023-02-21 08:56:44,697 alphafold2_ptm_model_4_seed_000 took 3.9s (3 recycles)
2023-02-21 08:56:45,631 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=75.9 pTM=0.472
2023-02-21 08:56:46,558 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=78 pTM=0.494 tol=0.364
2023-02-21 08:56:47,481 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=79.1 pTM=0.5 tol=0.181
2023-02-21 08:56:48,413 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=78.2 pTM=0.499 tol=0.456
2023-02-21 08:56:48,413 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 08:56:48,418 reranking models by 'plddt' metric
2023-02-21 08:56:48,418 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=80.3 pTM=0.503
2023-02-21 08:56:48,418 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=79.9 pTM=0.499
2023-02-21 08:56:48,418 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=78.7 pTM=0.501
2023-02-21 08:56:48,418 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=78.2 pTM=0.499
2023-02-21 08:56:48,418 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=75.6 pTM=0.473
2023-02-21 08:56:49,639 Done
