2023-02-21 11:18:59,802 Running colabfold 1.6.0 (f20a7e3cc0f2487c44335dc7281adf4cbc5aef3f)
2023-02-21 11:18:59,918 Running on GPU
2023-02-21 11:19:00,292 Found 4 citations for tools or databases
2023-02-21 11:19:00,292 Query 1/80: 6dny (length 4)
2023-02-21 11:19:06,014 Padding length to 14
2023-02-21 11:19:15,176 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=75.3 pTM=0.0865
2023-02-21 11:19:15,907 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=20.5 pTM=0.000714 tol=5.57
2023-02-21 11:19:16,637 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=14.3 pTM=0.000363 tol=12.4
2023-02-21 11:19:17,368 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=13.1 pTM=0.000257 tol=15
2023-02-21 11:19:17,368 alphafold2_ptm_model_1_seed_000 took 11.4s (3 recycles)
2023-02-21 11:19:18,100 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=65.1 pTM=0.0875
2023-02-21 11:19:18,831 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=38 pTM=0.0108 tol=12.1
2023-02-21 11:19:19,562 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=41.3 pTM=0.000311 tol=36.1
2023-02-21 11:19:20,292 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=22.6 pTM=0.000396 tol=37.8
2023-02-21 11:19:20,292 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:21,024 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=79.4 pTM=0.0875
2023-02-21 11:19:21,755 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=77.8 pTM=0.0862 tol=0.69
2023-02-21 11:19:22,486 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=78.3 pTM=0.0865 tol=0.62
2023-02-21 11:19:23,217 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=76.6 pTM=0.086 tol=0.481
2023-02-21 11:19:23,217 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:23,950 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=74.9 pTM=0.0859
2023-02-21 11:19:24,681 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=31.1 pTM=0.00555 tol=1.99
2023-02-21 11:19:25,415 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=29.8 pTM=0.000324 tol=15.5
2023-02-21 11:19:26,146 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=43.8 pTM=0.000239 tol=21.9
2023-02-21 11:19:26,146 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:26,878 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=71.7 pTM=0.0856
2023-02-21 11:19:27,609 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=54.3 pTM=0.0808 tol=16.8
2023-02-21 11:19:28,338 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=43.8 pTM=0.000206 tol=98.1
2023-02-21 11:19:29,067 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=25.8 pTM=0.000201 tol=91.5
2023-02-21 11:19:29,068 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:29,069 reranking models by 'plddt' metric
2023-02-21 11:19:29,069 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=76.6 pTM=0.086
2023-02-21 11:19:29,069 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=43.8 pTM=0.000239
2023-02-21 11:19:29,069 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=25.8 pTM=0.000201
2023-02-21 11:19:29,069 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=22.6 pTM=0.000396
2023-02-21 11:19:29,069 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=13.1 pTM=0.000257
2023-02-21 11:19:29,792 Query 2/80: 1qvk (length 6)
2023-02-21 11:19:31,605 Padding length to 14
2023-02-21 11:19:32,348 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.0625
2023-02-21 11:19:33,078 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.0626 tol=0.41
2023-02-21 11:19:33,809 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=68.7 pTM=0.0623 tol=0.438
2023-02-21 11:19:34,540 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=67.9 pTM=0.0616 tol=0.496
2023-02-21 11:19:34,540 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:35,272 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=62.4 pTM=0.062
2023-02-21 11:19:36,003 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.9 pTM=0.0621 tol=0.164
2023-02-21 11:19:36,733 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.062 tol=0.288
2023-02-21 11:19:37,463 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.9 pTM=0.062 tol=0.0528
2023-02-21 11:19:37,463 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:38,196 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.8 pTM=0.064
2023-02-21 11:19:38,927 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=73.9 pTM=0.0637 tol=0.349
2023-02-21 11:19:39,658 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.5 pTM=0.0638 tol=0.216
2023-02-21 11:19:40,389 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=75 pTM=0.064 tol=0.17
2023-02-21 11:19:40,389 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:41,121 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.6 pTM=0.0617
2023-02-21 11:19:41,852 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.0616 tol=0.259
2023-02-21 11:19:42,582 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.1 pTM=0.0616 tol=0.129
2023-02-21 11:19:43,312 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=73 pTM=0.0614 tol=0.0504
2023-02-21 11:19:43,312 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:44,044 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=66.1 pTM=0.0626
2023-02-21 11:19:44,774 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.4 pTM=0.0619 tol=0.484
2023-02-21 11:19:45,504 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=68.9 pTM=0.0616 tol=0.237
2023-02-21 11:19:46,235 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=69 pTM=0.0616 tol=0.117
2023-02-21 11:19:46,235 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:46,236 reranking models by 'plddt' metric
2023-02-21 11:19:46,236 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=75 pTM=0.064
2023-02-21 11:19:46,236 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=73 pTM=0.0614
2023-02-21 11:19:46,236 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=69 pTM=0.0616
2023-02-21 11:19:46,236 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=67.9 pTM=0.0616
2023-02-21 11:19:46,236 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=66.9 pTM=0.062
2023-02-21 11:19:46,903 Query 3/80: 1qvl (length 6)
2023-02-21 11:19:48,840 Padding length to 14
2023-02-21 11:19:49,595 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.0625
2023-02-21 11:19:50,325 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.0626 tol=0.41
2023-02-21 11:19:51,055 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=68.7 pTM=0.0623 tol=0.438
2023-02-21 11:19:51,785 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=67.9 pTM=0.0616 tol=0.496
2023-02-21 11:19:51,785 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:52,518 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=62.4 pTM=0.062
2023-02-21 11:19:53,250 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.9 pTM=0.0621 tol=0.164
2023-02-21 11:19:53,980 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.062 tol=0.288
2023-02-21 11:19:54,711 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.9 pTM=0.062 tol=0.0528
2023-02-21 11:19:54,711 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:55,447 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.8 pTM=0.064
2023-02-21 11:19:56,177 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=73.9 pTM=0.0637 tol=0.349
2023-02-21 11:19:56,911 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=74.5 pTM=0.0638 tol=0.216
2023-02-21 11:19:57,642 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=75 pTM=0.064 tol=0.17
2023-02-21 11:19:57,642 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:19:58,375 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=72.6 pTM=0.0617
2023-02-21 11:19:59,106 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.0616 tol=0.259
2023-02-21 11:19:59,836 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.1 pTM=0.0616 tol=0.129
2023-02-21 11:20:00,567 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=73 pTM=0.0614 tol=0.0504
2023-02-21 11:20:00,567 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:01,298 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=66.1 pTM=0.0626
2023-02-21 11:20:02,029 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.4 pTM=0.0619 tol=0.484
2023-02-21 11:20:02,759 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=68.9 pTM=0.0616 tol=0.237
2023-02-21 11:20:03,489 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=69 pTM=0.0616 tol=0.117
2023-02-21 11:20:03,489 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:03,490 reranking models by 'plddt' metric
2023-02-21 11:20:03,491 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=75 pTM=0.064
2023-02-21 11:20:03,491 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=73 pTM=0.0614
2023-02-21 11:20:03,491 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=69 pTM=0.0616
2023-02-21 11:20:03,491 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=67.9 pTM=0.0616
2023-02-21 11:20:03,491 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=66.9 pTM=0.062
2023-02-21 11:20:04,151 Query 4/80: 1ski (length 6)
2023-02-21 11:20:06,009 Padding length to 14
2023-02-21 11:20:06,751 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=72.9 pTM=0.0628
2023-02-21 11:20:07,482 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.2 pTM=0.0622 tol=0.526
2023-02-21 11:20:08,212 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=73.4 pTM=0.0623 tol=0.0683
2023-02-21 11:20:08,943 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.8 pTM=0.0622 tol=0.0426
2023-02-21 11:20:08,943 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:09,675 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.0662
2023-02-21 11:20:10,410 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.0646 tol=0.152
2023-02-21 11:20:11,141 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=67.9 pTM=0.0646 tol=0.0238
2023-02-21 11:20:11,871 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=67.9 pTM=0.0644 tol=0.0445
2023-02-21 11:20:11,871 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:12,608 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=77.6 pTM=0.0648
2023-02-21 11:20:13,338 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.1 pTM=0.0669 tol=0.13
2023-02-21 11:20:14,068 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=81.4 pTM=0.0675 tol=0.0276
2023-02-21 11:20:14,798 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81 pTM=0.0674 tol=0.00861
2023-02-21 11:20:14,798 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:15,531 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.7 pTM=0.0626
2023-02-21 11:20:16,261 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=75.6 pTM=0.0632 tol=0.167
2023-02-21 11:20:16,991 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.8 pTM=0.0634 tol=0.139
2023-02-21 11:20:17,721 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.4 pTM=0.0634 tol=0.102
2023-02-21 11:20:17,722 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:18,454 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.3 pTM=0.0665
2023-02-21 11:20:19,191 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=74 pTM=0.0669 tol=0.423
2023-02-21 11:20:19,922 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.6 pTM=0.067 tol=0.0382
2023-02-21 11:20:20,653 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74.5 pTM=0.0668 tol=0.0224
2023-02-21 11:20:20,653 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:20,654 reranking models by 'plddt' metric
2023-02-21 11:20:20,655 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=81 pTM=0.0674
2023-02-21 11:20:20,655 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=75.4 pTM=0.0634
2023-02-21 11:20:20,655 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=74.5 pTM=0.0668
2023-02-21 11:20:20,655 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=73.8 pTM=0.0622
2023-02-21 11:20:20,655 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=67.9 pTM=0.0644
2023-02-21 11:20:21,467 Query 5/80: 1skk (length 6)
2023-02-21 11:20:23,303 Padding length to 14
2023-02-21 11:20:24,052 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.0645
2023-02-21 11:20:24,782 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.0637 tol=0.379
2023-02-21 11:20:25,512 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=66 pTM=0.0631 tol=0.365
2023-02-21 11:20:26,242 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=62.5 pTM=0.0597 tol=0.613
2023-02-21 11:20:26,243 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:26,980 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.0643
2023-02-21 11:20:27,712 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=61.7 pTM=0.0641 tol=0.541
2023-02-21 11:20:28,442 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=64.9 pTM=0.0643 tol=0.239
2023-02-21 11:20:29,173 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=65.4 pTM=0.0645 tol=0.442
2023-02-21 11:20:29,173 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:29,906 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=67.1 pTM=0.0644
2023-02-21 11:20:30,636 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.6 pTM=0.0646 tol=0.238
2023-02-21 11:20:31,366 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=70.8 pTM=0.0647 tol=0.334
2023-02-21 11:20:32,096 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=71.2 pTM=0.0651 tol=0.087
2023-02-21 11:20:32,097 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:32,830 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.8 pTM=0.0631
2023-02-21 11:20:33,560 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=68.4 pTM=0.0637 tol=0.12
2023-02-21 11:20:34,291 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=69.2 pTM=0.0641 tol=0.112
2023-02-21 11:20:35,023 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=69.2 pTM=0.0642 tol=0.0236
2023-02-21 11:20:35,023 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:35,755 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=62.1 pTM=0.0628
2023-02-21 11:20:36,485 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.9 pTM=0.0635 tol=0.235
2023-02-21 11:20:37,215 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=67.2 pTM=0.0637 tol=0.204
2023-02-21 11:20:37,946 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.9 pTM=0.0637 tol=0.193
2023-02-21 11:20:37,946 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:37,947 reranking models by 'plddt' metric
2023-02-21 11:20:37,947 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=71.2 pTM=0.0651
2023-02-21 11:20:37,947 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=69.2 pTM=0.0642
2023-02-21 11:20:37,947 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=67.9 pTM=0.0637
2023-02-21 11:20:37,948 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=65.4 pTM=0.0645
2023-02-21 11:20:37,948 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=62.5 pTM=0.0597
2023-02-21 11:20:38,606 Query 6/80: 2otq (length 6)
2023-02-21 11:20:40,429 Padding length to 14
2023-02-21 11:20:41,184 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.3 pTM=0.0629
2023-02-21 11:20:41,915 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=69.1 pTM=0.0629 tol=0.325
2023-02-21 11:20:42,645 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=70.1 pTM=0.0629 tol=0.119
2023-02-21 11:20:43,376 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.6 pTM=0.0627 tol=0.155
2023-02-21 11:20:43,376 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:44,112 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=64.6 pTM=0.0637
2023-02-21 11:20:44,843 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=64.1 pTM=0.0628 tol=0.681
2023-02-21 11:20:45,573 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=69.4 pTM=0.0627 tol=0.369
2023-02-21 11:20:46,305 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=68.8 pTM=0.0628 tol=0.312
2023-02-21 11:20:46,305 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:47,038 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=73.9 pTM=0.0654
2023-02-21 11:20:47,768 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=77.5 pTM=0.065 tol=0.207
2023-02-21 11:20:48,499 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=78.6 pTM=0.0648 tol=0.0557
2023-02-21 11:20:49,230 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=77.9 pTM=0.0648 tol=0.0476
2023-02-21 11:20:49,230 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:49,962 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=73.2 pTM=0.063
2023-02-21 11:20:50,692 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=74.8 pTM=0.0627 tol=0.152
2023-02-21 11:20:51,422 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.4 pTM=0.0628 tol=0.0337
2023-02-21 11:20:52,152 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.4 pTM=0.0627 tol=0.0325
2023-02-21 11:20:52,152 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:52,885 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.5 pTM=0.0635
2023-02-21 11:20:53,615 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=69.4 pTM=0.0632 tol=0.267
2023-02-21 11:20:54,346 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=68.1 pTM=0.0631 tol=0.383
2023-02-21 11:20:55,082 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=69.7 pTM=0.063 tol=0.677
2023-02-21 11:20:55,082 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:20:55,083 reranking models by 'plddt' metric
2023-02-21 11:20:55,083 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=77.9 pTM=0.0648
2023-02-21 11:20:55,084 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=75.4 pTM=0.0627
2023-02-21 11:20:55,084 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=69.7 pTM=0.063
2023-02-21 11:20:55,084 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=68.8 pTM=0.0628
2023-02-21 11:20:55,084 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=68.6 pTM=0.0627
2023-02-21 11:20:55,880 Query 7/80: 2ox2 (length 6)
2023-02-21 11:20:57,701 Padding length to 14
2023-02-21 11:20:58,449 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=65.2 pTM=0.063
2023-02-21 11:20:59,179 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.2 pTM=0.0626 tol=0.325
2023-02-21 11:20:59,909 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.6 pTM=0.0626 tol=0.143
2023-02-21 11:21:00,639 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=61.2 pTM=0.0608 tol=0.426
2023-02-21 11:21:00,639 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:01,372 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=65.1 pTM=0.0635
2023-02-21 11:21:02,103 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.7 pTM=0.0632 tol=0.294
2023-02-21 11:21:02,834 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=67.2 pTM=0.0636 tol=0.12
2023-02-21 11:21:03,565 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=68.3 pTM=0.0636 tol=0.0671
2023-02-21 11:21:03,565 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:04,297 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=72.4 pTM=0.0652
2023-02-21 11:21:05,028 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=75.2 pTM=0.064 tol=0.526
2023-02-21 11:21:05,757 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=76.3 pTM=0.0646 tol=0.442
2023-02-21 11:21:06,488 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=75.4 pTM=0.0647 tol=0.0601
2023-02-21 11:21:06,488 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:07,221 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=69.6 pTM=0.0627
2023-02-21 11:21:07,950 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=72.5 pTM=0.063 tol=0.328
2023-02-21 11:21:08,680 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.2 pTM=0.0632 tol=0.062
2023-02-21 11:21:09,411 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=73.5 pTM=0.063 tol=0.0324
2023-02-21 11:21:09,412 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:10,144 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.6 pTM=0.0635
2023-02-21 11:21:10,874 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=69.8 pTM=0.063 tol=0.3
2023-02-21 11:21:11,604 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.0629 tol=0.139
2023-02-21 11:21:12,343 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=69.3 pTM=0.0629 tol=0.057
2023-02-21 11:21:12,343 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:12,344 reranking models by 'plddt' metric
2023-02-21 11:21:12,344 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=75.4 pTM=0.0647
2023-02-21 11:21:12,345 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=73.5 pTM=0.063
2023-02-21 11:21:12,345 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=69.3 pTM=0.0629
2023-02-21 11:21:12,345 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=68.3 pTM=0.0636
2023-02-21 11:21:12,345 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=61.2 pTM=0.0608
2023-02-21 11:21:13,143 Query 8/80: 7m2a (length 7)
2023-02-21 11:21:14,998 Padding length to 14
2023-02-21 11:21:15,739 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=75.9 pTM=0.0565
2023-02-21 11:21:16,470 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.2 pTM=0.0562 tol=0.245
2023-02-21 11:21:17,200 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=62.6 pTM=0.055 tol=1.57
2023-02-21 11:21:17,931 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=55.5 pTM=0.0542 tol=2.14
2023-02-21 11:21:17,931 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:18,663 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.1 pTM=0.0565
2023-02-21 11:21:19,393 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=74.6 pTM=0.0567 tol=0.194
2023-02-21 11:21:20,124 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=74.3 pTM=0.0569 tol=0.0763
2023-02-21 11:21:20,854 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.2 pTM=0.057 tol=0.26
2023-02-21 11:21:20,855 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:21,587 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=70.1 pTM=0.0533
2023-02-21 11:21:22,318 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=71.2 pTM=0.0541 tol=0.762
2023-02-21 11:21:23,048 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=72.4 pTM=0.0541 tol=0.323
2023-02-21 11:21:23,780 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=73.1 pTM=0.054 tol=0.0392
2023-02-21 11:21:23,780 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:24,512 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.053
2023-02-21 11:21:25,247 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=75.2 pTM=0.0544 tol=0.314
2023-02-21 11:21:25,978 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=75.7 pTM=0.0546 tol=0.142
2023-02-21 11:21:26,708 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.9 pTM=0.0546 tol=0.0526
2023-02-21 11:21:26,708 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:27,441 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.6 pTM=0.0555
2023-02-21 11:21:28,172 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68 pTM=0.056 tol=0.752
2023-02-21 11:21:28,903 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.4 pTM=0.0562 tol=0.518
2023-02-21 11:21:29,633 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=73 pTM=0.0562 tol=0.11
2023-02-21 11:21:29,634 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:29,635 reranking models by 'plddt' metric
2023-02-21 11:21:29,635 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=75.9 pTM=0.0546
2023-02-21 11:21:29,635 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=74.2 pTM=0.057
2023-02-21 11:21:29,635 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=73.1 pTM=0.054
2023-02-21 11:21:29,635 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=73 pTM=0.0562
2023-02-21 11:21:29,635 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=55.5 pTM=0.0542
2023-02-21 11:21:30,305 Query 9/80: 7m2c (length 7)
2023-02-21 11:21:32,122 Padding length to 14
2023-02-21 11:21:32,869 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=76.1 pTM=0.0572
2023-02-21 11:21:33,599 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.6 pTM=0.0576 tol=0.202
2023-02-21 11:21:34,329 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=73.9 pTM=0.0576 tol=0.13
2023-02-21 11:21:35,060 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=74.9 pTM=0.0574 tol=0.129
2023-02-21 11:21:35,060 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:35,792 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.4 pTM=0.0582
2023-02-21 11:21:36,523 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=73.6 pTM=0.0587 tol=0.24
2023-02-21 11:21:37,252 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=73.8 pTM=0.0587 tol=0.386
2023-02-21 11:21:37,983 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=73.4 pTM=0.0586 tol=0.031
2023-02-21 11:21:37,983 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:38,720 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=73.2 pTM=0.0557
2023-02-21 11:21:39,450 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76 pTM=0.0567 tol=0.252
2023-02-21 11:21:40,184 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=76.2 pTM=0.057 tol=0.0712
2023-02-21 11:21:40,916 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=76.2 pTM=0.0571 tol=0.0439
2023-02-21 11:21:40,916 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:41,648 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.7 pTM=0.0569
2023-02-21 11:21:42,379 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=77.4 pTM=0.058 tol=0.237
2023-02-21 11:21:43,110 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=77.5 pTM=0.0582 tol=0.144
2023-02-21 11:21:43,841 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=77.9 pTM=0.058 tol=0.2
2023-02-21 11:21:43,841 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:44,573 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.3 pTM=0.0564
2023-02-21 11:21:45,303 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=77.6 pTM=0.0573 tol=0.349
2023-02-21 11:21:46,033 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=78.6 pTM=0.0576 tol=0.293
2023-02-21 11:21:46,763 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=79.1 pTM=0.0575 tol=0.087
2023-02-21 11:21:46,763 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:46,764 reranking models by 'plddt' metric
2023-02-21 11:21:46,765 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=79.1 pTM=0.0575
2023-02-21 11:21:46,765 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=77.9 pTM=0.058
2023-02-21 11:21:46,765 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=76.2 pTM=0.0571
2023-02-21 11:21:46,765 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=74.9 pTM=0.0574
2023-02-21 11:21:46,765 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=73.4 pTM=0.0586
2023-02-21 11:21:47,573 Query 10/80: 7m28 (length 7)
2023-02-21 11:21:49,406 Padding length to 14
2023-02-21 11:21:50,162 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.9 pTM=0.0584
2023-02-21 11:21:50,892 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=73.8 pTM=0.058 tol=0.507
2023-02-21 11:21:51,623 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=63 pTM=0.0557 tol=2.53
2023-02-21 11:21:52,354 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=55.1 pTM=0.0543 tol=2.11
2023-02-21 11:21:52,354 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:53,087 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.0575
2023-02-21 11:21:53,818 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=76.7 pTM=0.0582 tol=0.426
2023-02-21 11:21:54,548 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.3 pTM=0.0585 tol=0.142
2023-02-21 11:21:55,279 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.5 pTM=0.0587 tol=0.0526
2023-02-21 11:21:55,279 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:56,012 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=74.8 pTM=0.0551
2023-02-21 11:21:56,743 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.055 tol=0.727
2023-02-21 11:21:57,474 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=76.4 pTM=0.0552 tol=0.556
2023-02-21 11:21:58,205 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=77.4 pTM=0.0555 tol=0.125
2023-02-21 11:21:58,205 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:21:58,936 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75 pTM=0.0555
2023-02-21 11:21:59,667 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.9 pTM=0.0562 tol=0.473
2023-02-21 11:22:00,397 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.2 pTM=0.0564 tol=0.37
2023-02-21 11:22:01,128 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=76.6 pTM=0.0564 tol=0.0606
2023-02-21 11:22:01,128 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:01,860 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=75.1 pTM=0.0565
2023-02-21 11:22:02,591 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=76.6 pTM=0.0576 tol=0.257
2023-02-21 11:22:03,320 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=75.4 pTM=0.0578 tol=0.406
2023-02-21 11:22:04,051 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=78.2 pTM=0.0579 tol=0.298
2023-02-21 11:22:04,051 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:04,052 reranking models by 'plddt' metric
2023-02-21 11:22:04,052 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=78.2 pTM=0.0579
2023-02-21 11:22:04,052 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=77.4 pTM=0.0555
2023-02-21 11:22:04,052 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=76.6 pTM=0.0564
2023-02-21 11:22:04,053 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=76.5 pTM=0.0587
2023-02-21 11:22:04,053 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=55.1 pTM=0.0543
2023-02-21 11:22:04,730 Query 11/80: 6wpv (length 8)
2023-02-21 11:22:06,690 Padding length to 14
2023-02-21 11:22:07,438 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=65.4 pTM=0.0538
2023-02-21 11:22:08,169 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=72.2 pTM=0.0546 tol=1.07
2023-02-21 11:22:08,899 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=73.8 pTM=0.0553 tol=0.517
2023-02-21 11:22:09,629 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.6 pTM=0.0555 tol=0.0495
2023-02-21 11:22:09,630 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:10,362 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.0518
2023-02-21 11:22:11,094 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.0523 tol=0.939
2023-02-21 11:22:11,825 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=69.6 pTM=0.0523 tol=0.292
2023-02-21 11:22:12,556 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.8 pTM=0.0524 tol=0.202
2023-02-21 11:22:12,556 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:13,288 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.4 pTM=0.0524
2023-02-21 11:22:14,019 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=78.7 pTM=0.0535 tol=0.523
2023-02-21 11:22:14,749 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=77.8 pTM=0.0537 tol=0.09
2023-02-21 11:22:15,479 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=79.1 pTM=0.0538 tol=0.121
2023-02-21 11:22:15,480 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:16,212 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=68.6 pTM=0.0518
2023-02-21 11:22:16,943 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=66.5 pTM=0.0521 tol=0.442
2023-02-21 11:22:17,673 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=68.6 pTM=0.0523 tol=0.844
2023-02-21 11:22:18,404 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=69.3 pTM=0.0527 tol=0.751
2023-02-21 11:22:18,404 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:19,135 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=67.9 pTM=0.0517
2023-02-21 11:22:19,866 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=63.6 pTM=0.0524 tol=0.595
2023-02-21 11:22:20,595 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=70.1 pTM=0.0528 tol=0.891
2023-02-21 11:22:21,326 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.2 pTM=0.0528 tol=0.252
2023-02-21 11:22:21,326 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:21,327 reranking models by 'plddt' metric
2023-02-21 11:22:21,327 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=79.1 pTM=0.0538
2023-02-21 11:22:21,327 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=73.6 pTM=0.0555
2023-02-21 11:22:21,327 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=70.2 pTM=0.0528
2023-02-21 11:22:21,327 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=69.3 pTM=0.0527
2023-02-21 11:22:21,327 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=66.8 pTM=0.0524
2023-02-21 11:22:22,002 Query 12/80: 7m2b (length 8)
2023-02-21 11:22:23,843 Padding length to 14
2023-02-21 11:22:24,595 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.2 pTM=0.051
2023-02-21 11:22:25,326 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=67.6 pTM=0.0518 tol=0.305
2023-02-21 11:22:26,056 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=69 pTM=0.0517 tol=1.04
2023-02-21 11:22:26,787 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.0517 tol=0.208
2023-02-21 11:22:26,787 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:27,519 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=70.9 pTM=0.0515
2023-02-21 11:22:28,250 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=71.7 pTM=0.0503 tol=0.245
2023-02-21 11:22:28,980 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=71.3 pTM=0.0501 tol=0.0754
2023-02-21 11:22:29,710 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=71.5 pTM=0.0499 tol=0.258
2023-02-21 11:22:29,710 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:30,442 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.7 pTM=0.0495
2023-02-21 11:22:31,173 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.9 pTM=0.0491 tol=0.242
2023-02-21 11:22:31,902 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.1 pTM=0.049 tol=0.273
2023-02-21 11:22:32,633 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=69.1 pTM=0.0489 tol=0.113
2023-02-21 11:22:32,633 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:33,365 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=71.8 pTM=0.0498
2023-02-21 11:22:34,096 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=73.8 pTM=0.051 tol=0.46
2023-02-21 11:22:34,825 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.6 pTM=0.0518 tol=0.148
2023-02-21 11:22:35,556 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=78.1 pTM=0.0522 tol=0.0723
2023-02-21 11:22:35,556 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:36,288 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.8 pTM=0.0506
2023-02-21 11:22:37,019 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.1 pTM=0.0507 tol=0.394
2023-02-21 11:22:37,749 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=73.8 pTM=0.051 tol=0.0477
2023-02-21 11:22:38,480 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=74.4 pTM=0.051 tol=0.0241
2023-02-21 11:22:38,480 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:38,481 reranking models by 'plddt' metric
2023-02-21 11:22:38,481 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=78.1 pTM=0.0522
2023-02-21 11:22:38,481 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=74.4 pTM=0.051
2023-02-21 11:22:38,481 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=71.5 pTM=0.0499
2023-02-21 11:22:38,481 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=69.1 pTM=0.0489
2023-02-21 11:22:38,481 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=68.2 pTM=0.0517
2023-02-21 11:22:39,275 Query 13/80: 7m25 (length 8)
2023-02-21 11:22:41,105 Padding length to 14
2023-02-21 11:22:41,858 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=65.3 pTM=0.053
2023-02-21 11:22:42,595 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=68.5 pTM=0.0534 tol=0.796
2023-02-21 11:22:43,329 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.1 pTM=0.0533 tol=0.4
2023-02-21 11:22:44,059 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.1 pTM=0.0531 tol=0.191
2023-02-21 11:22:44,059 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 11:22:44,794 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=67.7 pTM=0.0517
2023-02-21 11:22:45,532 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=68.2 pTM=0.0519 tol=0.828
2023-02-21 11:22:46,268 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.052 tol=0.373
2023-02-21 11:22:46,999 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=69.7 pTM=0.0521 tol=0.215
2023-02-21 11:22:46,999 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:47,741 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=71.5 pTM=0.0511
2023-02-21 11:22:48,477 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.9 pTM=0.0508 tol=0.329
2023-02-21 11:22:49,212 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.3 pTM=0.051 tol=0.123
2023-02-21 11:22:49,942 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=69.7 pTM=0.0511 tol=0.412
2023-02-21 11:22:49,942 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:50,681 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.3 pTM=0.0535
2023-02-21 11:22:51,418 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=74.1 pTM=0.0533 tol=0.278
2023-02-21 11:22:52,154 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=74.9 pTM=0.0532 tol=0.031
2023-02-21 11:22:52,885 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=75.2 pTM=0.0533 tol=0.0399
2023-02-21 11:22:52,885 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:22:53,623 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.1 pTM=0.0514
2023-02-21 11:22:54,480 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.0517 tol=1.38
2023-02-21 11:22:55,210 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.0532 tol=1.18
2023-02-21 11:22:55,940 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.9 pTM=0.0526 tol=0.261
2023-02-21 11:22:55,940 alphafold2_ptm_model_5_seed_000 took 3.1s (3 recycles)
2023-02-21 11:22:55,942 reranking models by 'plddt' metric
2023-02-21 11:22:55,942 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=75.2 pTM=0.0533
2023-02-21 11:22:55,942 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=69.7 pTM=0.0511
2023-02-21 11:22:55,942 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=69.7 pTM=0.0521
2023-02-21 11:22:55,942 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=68.9 pTM=0.0526
2023-02-21 11:22:55,942 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=68.1 pTM=0.0531
2023-02-21 11:22:56,608 Query 14/80: 7m27 (length 8)
2023-02-21 11:22:58,413 Padding length to 14
2023-02-21 11:22:59,166 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.3 pTM=0.0494
2023-02-21 11:22:59,896 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=67.9 pTM=0.0496 tol=1.22
2023-02-21 11:23:00,625 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67.9 pTM=0.0497 tol=0.53
2023-02-21 11:23:01,356 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=66.5 pTM=0.0496 tol=0.528
2023-02-21 11:23:01,356 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:02,088 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.0488
2023-02-21 11:23:02,818 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=67.8 pTM=0.0489 tol=0.472
2023-02-21 11:23:03,549 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=71.8 pTM=0.0491 tol=0.36
2023-02-21 11:23:04,279 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=72.1 pTM=0.0492 tol=0.108
2023-02-21 11:23:04,279 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:05,012 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=70.7 pTM=0.0472
2023-02-21 11:23:05,743 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=69.9 pTM=0.0476 tol=0.73
2023-02-21 11:23:06,474 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.8 pTM=0.0479 tol=0.265
2023-02-21 11:23:07,205 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=69 pTM=0.0481 tol=0.185
2023-02-21 11:23:07,205 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:07,937 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=67 pTM=0.0475
2023-02-21 11:23:08,668 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=66.9 pTM=0.0474 tol=0.891
2023-02-21 11:23:09,398 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=68.4 pTM=0.0475 tol=0.523
2023-02-21 11:23:10,128 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=66.3 pTM=0.0474 tol=0.451
2023-02-21 11:23:10,128 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:10,860 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.2 pTM=0.0489
2023-02-21 11:23:11,591 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=65.3 pTM=0.0486 tol=0.459
2023-02-21 11:23:12,321 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=65.4 pTM=0.0487 tol=0.308
2023-02-21 11:23:13,052 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=63.8 pTM=0.0487 tol=0.344
2023-02-21 11:23:13,052 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:13,053 reranking models by 'plddt' metric
2023-02-21 11:23:13,053 rank_001_alphafold2_ptm_model_2_seed_000 pLDDT=72.1 pTM=0.0492
2023-02-21 11:23:13,053 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=69 pTM=0.0481
2023-02-21 11:23:13,053 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=66.5 pTM=0.0496
2023-02-21 11:23:13,053 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=66.3 pTM=0.0474
2023-02-21 11:23:13,053 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=63.8 pTM=0.0487
2023-02-21 11:23:13,864 Query 15/80: 7m29 (length 8)
2023-02-21 11:23:15,695 Padding length to 14
2023-02-21 11:23:16,440 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.8 pTM=0.0501
2023-02-21 11:23:17,171 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=67.8 pTM=0.0509 tol=0.227
2023-02-21 11:23:17,901 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=69.3 pTM=0.0507 tol=0.271
2023-02-21 11:23:18,631 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=69.2 pTM=0.0508 tol=0.0646
2023-02-21 11:23:18,631 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:19,364 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=67.2 pTM=0.0497
2023-02-21 11:23:20,095 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=64.7 pTM=0.0497 tol=0.468
2023-02-21 11:23:20,826 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=65.8 pTM=0.05 tol=0.423
2023-02-21 11:23:21,557 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.0501 tol=0.125
2023-02-21 11:23:21,557 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:22,290 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=67.2 pTM=0.0471
2023-02-21 11:23:23,020 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=70.3 pTM=0.0486 tol=0.306
2023-02-21 11:23:23,750 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=70.1 pTM=0.0488 tol=0.0742
2023-02-21 11:23:24,481 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=70.3 pTM=0.049 tol=0.101
2023-02-21 11:23:24,481 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:25,213 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=67.4 pTM=0.0485
2023-02-21 11:23:25,943 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=69.9 pTM=0.0493 tol=0.343
2023-02-21 11:23:26,673 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=71.4 pTM=0.0493 tol=0.27
2023-02-21 11:23:27,404 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=71.8 pTM=0.0495 tol=0.0367
2023-02-21 11:23:27,404 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:28,136 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=69.2 pTM=0.049
2023-02-21 11:23:28,866 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=72.8 pTM=0.0504 tol=0.478
2023-02-21 11:23:29,596 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=71.6 pTM=0.0497 tol=0.158
2023-02-21 11:23:30,327 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=70.6 pTM=0.0498 tol=0.146
2023-02-21 11:23:30,327 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:30,332 reranking models by 'plddt' metric
2023-02-21 11:23:30,332 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=71.8 pTM=0.0495
2023-02-21 11:23:30,332 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=70.6 pTM=0.0498
2023-02-21 11:23:30,333 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=70.3 pTM=0.049
2023-02-21 11:23:30,333 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=69.2 pTM=0.0508
2023-02-21 11:23:30,333 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=66.2 pTM=0.0501
2023-02-21 11:23:30,995 Query 16/80: 2lws (length 12)
2023-02-21 11:23:32,966 Padding length to 14
2023-02-21 11:23:33,722 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.2 pTM=0.0414
2023-02-21 11:23:34,453 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=82.1 pTM=0.041 tol=0.311
2023-02-21 11:23:35,183 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=82.3 pTM=0.0412 tol=0.117
2023-02-21 11:23:35,913 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82 pTM=0.0412 tol=0.0288
2023-02-21 11:23:35,914 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:36,646 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=78.6 pTM=0.0408
2023-02-21 11:23:37,377 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=73.6 pTM=0.0389 tol=0.545
2023-02-21 11:23:38,106 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=73.4 pTM=0.0385 tol=0.15
2023-02-21 11:23:38,837 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.1 pTM=0.0389 tol=0.0483
2023-02-21 11:23:38,838 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:39,570 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.9 pTM=0.0432
2023-02-21 11:23:40,301 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.8 pTM=0.0431 tol=0.151
2023-02-21 11:23:41,032 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.1 pTM=0.0439 tol=0.139
2023-02-21 11:23:41,763 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89.5 pTM=0.0442 tol=0.0435
2023-02-21 11:23:41,763 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:42,495 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.1 pTM=0.042
2023-02-21 11:23:43,226 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=87.5 pTM=0.0425 tol=0.14
2023-02-21 11:23:43,956 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=87.9 pTM=0.043 tol=0.0599
2023-02-21 11:23:44,686 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=88.1 pTM=0.0432 tol=0.025
2023-02-21 11:23:44,686 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:45,419 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=84.2 pTM=0.0421
2023-02-21 11:23:46,150 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=82.8 pTM=0.0422 tol=0.265
2023-02-21 11:23:46,881 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.6 pTM=0.0427 tol=0.0232
2023-02-21 11:23:47,611 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=83.6 pTM=0.0428 tol=0.0154
2023-02-21 11:23:47,611 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:47,612 reranking models by 'plddt' metric
2023-02-21 11:23:47,612 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=89.5 pTM=0.0442
2023-02-21 11:23:47,613 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=88.1 pTM=0.0432
2023-02-21 11:23:47,613 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=83.6 pTM=0.0428
2023-02-21 11:23:47,613 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=82 pTM=0.0412
2023-02-21 11:23:47,613 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=74.1 pTM=0.0389
2023-02-21 11:23:48,286 Query 17/80: 2ndm (length 13)
2023-02-21 11:23:50,083 Padding length to 14
2023-02-21 11:23:50,829 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66 pTM=0.0317
2023-02-21 11:23:51,559 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=65.8 pTM=0.0323 tol=0.629
2023-02-21 11:23:52,288 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=66.4 pTM=0.0324 tol=0.0918
2023-02-21 11:23:53,018 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=66.9 pTM=0.0325 tol=0.0932
2023-02-21 11:23:53,018 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:53,754 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=61.6 pTM=0.0302
2023-02-21 11:23:54,485 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=60 pTM=0.0303 tol=0.953
2023-02-21 11:23:55,215 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=58.5 pTM=0.0303 tol=1.54
2023-02-21 11:23:55,948 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=59.9 pTM=0.0302 tol=0.835
2023-02-21 11:23:55,948 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:56,683 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.0295
2023-02-21 11:23:57,416 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.0302 tol=0.437
2023-02-21 11:23:58,149 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=65.2 pTM=0.0307 tol=0.411
2023-02-21 11:23:58,887 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=65.5 pTM=0.0311 tol=0.267
2023-02-21 11:23:58,887 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:23:59,627 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=64.2 pTM=0.0301
2023-02-21 11:24:00,360 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=64.5 pTM=0.0305 tol=0.359
2023-02-21 11:24:01,093 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.0309 tol=0.121
2023-02-21 11:24:01,826 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=65.5 pTM=0.0308 tol=0.0696
2023-02-21 11:24:01,826 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:02,565 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=57.2 pTM=0.0299
2023-02-21 11:24:03,298 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=57.9 pTM=0.03 tol=1.73
2023-02-21 11:24:04,031 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=58.7 pTM=0.0301 tol=0.207
2023-02-21 11:24:04,764 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=59 pTM=0.0301 tol=0.094
2023-02-21 11:24:04,764 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:04,765 reranking models by 'plddt' metric
2023-02-21 11:24:04,766 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=66.9 pTM=0.0325
2023-02-21 11:24:04,766 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=65.5 pTM=0.0308
2023-02-21 11:24:04,766 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=65.5 pTM=0.0311
2023-02-21 11:24:04,766 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=59.9 pTM=0.0302
2023-02-21 11:24:04,766 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=59 pTM=0.0301
2023-02-21 11:24:05,543 Query 18/80: 1jbl (length 14)
2023-02-21 11:24:08,124 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=66.1 pTM=0.0303
2023-02-21 11:24:08,857 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=84.4 pTM=0.0377 tol=1.19
2023-02-21 11:24:09,590 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.2 pTM=0.0392 tol=0.238
2023-02-21 11:24:10,323 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.1 pTM=0.0392 tol=0.0346
2023-02-21 11:24:10,323 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 11:24:11,059 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.8 pTM=0.0423
2023-02-21 11:24:11,799 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.8 pTM=0.0417 tol=0.208
2023-02-21 11:24:12,532 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.8 pTM=0.0419 tol=0.149
2023-02-21 11:24:13,266 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.9 pTM=0.0421 tol=0.0741
2023-02-21 11:24:13,266 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:14,002 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88.9 pTM=0.0406
2023-02-21 11:24:14,736 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.9 pTM=0.0426 tol=0.337
2023-02-21 11:24:15,469 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.9 pTM=0.0434 tol=0.134
2023-02-21 11:24:16,203 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.2 pTM=0.0436 tol=0.0331
2023-02-21 11:24:16,203 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:16,938 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.1 pTM=0.0418
2023-02-21 11:24:17,671 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90 pTM=0.0419 tol=0.267
2023-02-21 11:24:18,404 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.0422 tol=0.0852
2023-02-21 11:24:19,137 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.7 pTM=0.0424 tol=0.0596
2023-02-21 11:24:19,137 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:19,872 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.6 pTM=0.041
2023-02-21 11:24:20,605 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.1 pTM=0.0433 tol=0.273
2023-02-21 11:24:21,337 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.9 pTM=0.0443 tol=0.0854
2023-02-21 11:24:22,070 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.8 pTM=0.0444 tol=0.183
2023-02-21 11:24:22,070 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:22,072 reranking models by 'plddt' metric
2023-02-21 11:24:22,072 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=92.8 pTM=0.0444
2023-02-21 11:24:22,072 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.2 pTM=0.0436
2023-02-21 11:24:22,072 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.7 pTM=0.0424
2023-02-21 11:24:22,072 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.1 pTM=0.0392
2023-02-21 11:24:22,072 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.9 pTM=0.0421
2023-02-21 11:24:22,740 Query 19/80: 2ns4 (length 14)
2023-02-21 11:24:25,355 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=70.4 pTM=0.0305
2023-02-21 11:24:26,088 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=65.2 pTM=0.0292 tol=0.328
2023-02-21 11:24:26,820 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.2 pTM=0.029 tol=0.118
2023-02-21 11:24:27,553 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=64.2 pTM=0.0291 tol=0.0822
2023-02-21 11:24:27,553 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 11:24:28,293 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.03
2023-02-21 11:24:29,026 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=66.2 pTM=0.0312 tol=1.01
2023-02-21 11:24:29,759 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=69.3 pTM=0.0321 tol=0.222
2023-02-21 11:24:30,493 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=71.2 pTM=0.0326 tol=0.0618
2023-02-21 11:24:30,493 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:31,228 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.0285
2023-02-21 11:24:31,960 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.5 pTM=0.0281 tol=0.526
2023-02-21 11:24:32,692 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=67.8 pTM=0.0282 tol=0.481
2023-02-21 11:24:33,425 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=66.9 pTM=0.0288 tol=1.33
2023-02-21 11:24:33,425 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:34,160 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=66.2 pTM=0.0281
2023-02-21 11:24:34,893 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=71.6 pTM=0.0289 tol=1.31
2023-02-21 11:24:35,625 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.2 pTM=0.0304 tol=0.673
2023-02-21 11:24:36,358 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=78.4 pTM=0.0313 tol=0.144
2023-02-21 11:24:36,358 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:37,094 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=78.3 pTM=0.0308
2023-02-21 11:24:37,827 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=76.6 pTM=0.0302 tol=0.161
2023-02-21 11:24:38,559 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=77.4 pTM=0.0307 tol=0.108
2023-02-21 11:24:39,292 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=77.5 pTM=0.0308 tol=0.0424
2023-02-21 11:24:39,293 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:39,294 reranking models by 'plddt' metric
2023-02-21 11:24:39,294 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=78.4 pTM=0.0313
2023-02-21 11:24:39,294 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=77.5 pTM=0.0308
2023-02-21 11:24:39,294 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=71.2 pTM=0.0326
2023-02-21 11:24:39,294 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=66.9 pTM=0.0288
2023-02-21 11:24:39,294 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=64.2 pTM=0.0291
2023-02-21 11:24:40,103 Query 20/80: 6u7q (length 14)
2023-02-21 11:24:42,655 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=60.5 pTM=0.0288
2023-02-21 11:24:43,388 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.8 pTM=0.0355 tol=2.14
2023-02-21 11:24:44,121 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.7 pTM=0.0382 tol=0.34
2023-02-21 11:24:44,854 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.5 pTM=0.0381 tol=0.0648
2023-02-21 11:24:44,854 alphafold2_ptm_model_1_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:45,590 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.2 pTM=0.0394
2023-02-21 11:24:46,323 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.4 pTM=0.0396 tol=0.176
2023-02-21 11:24:47,056 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.1 pTM=0.0398 tol=0.117
2023-02-21 11:24:47,789 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.9 pTM=0.0399 tol=0.0671
2023-02-21 11:24:47,789 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:48,524 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=86 pTM=0.0373
2023-02-21 11:24:49,257 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.3 pTM=0.0396 tol=0.261
2023-02-21 11:24:49,989 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.8 pTM=0.041 tol=0.161
2023-02-21 11:24:50,727 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.1 pTM=0.0414 tol=0.0398
2023-02-21 11:24:50,731 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:51,465 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.4 pTM=0.04
2023-02-21 11:24:52,199 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.0408 tol=0.26
2023-02-21 11:24:52,932 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.8 pTM=0.0415 tol=0.0895
2023-02-21 11:24:53,665 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.2 pTM=0.0417 tol=0.0592
2023-02-21 11:24:53,665 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:54,400 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89 pTM=0.0397
2023-02-21 11:24:55,133 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.5 pTM=0.042 tol=0.322
2023-02-21 11:24:55,866 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.4 pTM=0.0432 tol=0.11
2023-02-21 11:24:56,599 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.8 pTM=0.0436 tol=0.0432
2023-02-21 11:24:56,599 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:24:56,601 reranking models by 'plddt' metric
2023-02-21 11:24:56,601 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=92.8 pTM=0.0436
2023-02-21 11:24:56,601 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.2 pTM=0.0417
2023-02-21 11:24:56,601 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=91.1 pTM=0.0414
2023-02-21 11:24:56,601 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.9 pTM=0.0399
2023-02-21 11:24:56,601 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.5 pTM=0.0381
2023-02-21 11:24:57,254 Query 21/80: 6u7r (length 14)
2023-02-21 11:24:59,959 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.4 pTM=0.0404
2023-02-21 11:25:00,692 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.1 pTM=0.0417 tol=0.177
2023-02-21 11:25:01,424 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.6 pTM=0.042 tol=0.21
2023-02-21 11:25:02,156 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.2 pTM=0.042 tol=0.0558
2023-02-21 11:25:02,157 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 11:25:02,897 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.6 pTM=0.0435
2023-02-21 11:25:03,630 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.6 pTM=0.0445 tol=0.144
2023-02-21 11:25:04,364 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.6 pTM=0.0443 tol=0.113
2023-02-21 11:25:05,097 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.6 pTM=0.0441 tol=0.0319
2023-02-21 11:25:05,097 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:05,832 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.9 pTM=0.0424
2023-02-21 11:25:06,565 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.3 pTM=0.0442 tol=0.363
2023-02-21 11:25:07,298 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.9 pTM=0.0443 tol=0.0327
2023-02-21 11:25:08,032 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.8 pTM=0.0442 tol=0.0231
2023-02-21 11:25:08,032 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:08,767 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.4 pTM=0.0433
2023-02-21 11:25:09,500 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.2 pTM=0.0438 tol=0.167
2023-02-21 11:25:10,233 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.0438 tol=0.127
2023-02-21 11:25:10,967 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.6 pTM=0.0437 tol=0.0229
2023-02-21 11:25:10,967 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:11,702 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.8 pTM=0.0405
2023-02-21 11:25:12,435 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.4 pTM=0.0419 tol=0.148
2023-02-21 11:25:13,167 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90 pTM=0.042 tol=0.0708
2023-02-21 11:25:13,900 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.8 pTM=0.042 tol=0.0247
2023-02-21 11:25:13,900 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:13,902 reranking models by 'plddt' metric
2023-02-21 11:25:13,902 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.8 pTM=0.0442
2023-02-21 11:25:13,902 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.6 pTM=0.0437
2023-02-21 11:25:13,902 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.8 pTM=0.042
2023-02-21 11:25:13,902 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88.6 pTM=0.0441
2023-02-21 11:25:13,902 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.2 pTM=0.042
2023-02-21 11:25:14,559 Query 22/80: 6u7s (length 14)
2023-02-21 11:25:17,112 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.7 pTM=0.0396
2023-02-21 11:25:17,845 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.1 pTM=0.0396 tol=0.278
2023-02-21 11:25:18,577 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.8 pTM=0.04 tol=0.0357
2023-02-21 11:25:19,312 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.8 pTM=0.0401 tol=0.013
2023-02-21 11:25:19,312 alphafold2_ptm_model_1_seed_000 took 3.0s (3 recycles)
2023-02-21 11:25:20,047 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.4 pTM=0.0428
2023-02-21 11:25:20,781 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.4 pTM=0.0414 tol=0.206
2023-02-21 11:25:21,514 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.7 pTM=0.0408 tol=0.135
2023-02-21 11:25:22,247 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85.4 pTM=0.0404 tol=0.0312
2023-02-21 11:25:22,247 alphafold2_ptm_model_2_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:22,982 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92 pTM=0.0434
2023-02-21 11:25:23,716 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.9 pTM=0.0424 tol=0.228
2023-02-21 11:25:24,449 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92 pTM=0.0425 tol=0.0507
2023-02-21 11:25:25,183 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.8 pTM=0.0424 tol=0.0202
2023-02-21 11:25:25,183 alphafold2_ptm_model_3_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:25,917 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.2 pTM=0.0425
2023-02-21 11:25:26,650 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.7 pTM=0.0424 tol=0.23
2023-02-21 11:25:27,382 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92 pTM=0.0426 tol=0.0254
2023-02-21 11:25:28,115 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.9 pTM=0.0426 tol=0.0268
2023-02-21 11:25:28,115 alphafold2_ptm_model_4_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:28,850 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.7 pTM=0.0427
2023-02-21 11:25:29,583 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.6 pTM=0.0424 tol=0.261
2023-02-21 11:25:30,315 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.4 pTM=0.0424 tol=0.0446
2023-02-21 11:25:31,048 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.5 pTM=0.0422 tol=0.0261
2023-02-21 11:25:31,048 alphafold2_ptm_model_5_seed_000 took 2.9s (3 recycles)
2023-02-21 11:25:31,049 reranking models by 'plddt' metric
2023-02-21 11:25:31,050 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=92.5 pTM=0.0422
2023-02-21 11:25:31,050 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.9 pTM=0.0426
2023-02-21 11:25:31,050 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=91.8 pTM=0.0424
2023-02-21 11:25:31,050 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.8 pTM=0.0401
2023-02-21 11:25:31,050 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=85.4 pTM=0.0404
2023-02-21 11:25:31,832 Query 23/80: 2lwu (length 15)
2023-02-21 11:25:33,648 Padding length to 25
2023-02-21 11:25:41,720 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.6 pTM=0.0413
2023-02-21 11:25:42,654 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.0416 tol=0.0996
2023-02-21 11:25:43,588 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.9 pTM=0.0413 tol=0.0609
2023-02-21 11:25:44,521 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.6 pTM=0.0412 tol=0.0359
2023-02-21 11:25:44,521 alphafold2_ptm_model_1_seed_000 took 10.9s (3 recycles)
2023-02-21 11:25:45,459 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=92.3 pTM=0.0427
2023-02-21 11:25:46,395 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.9 pTM=0.0433 tol=0.0858
2023-02-21 11:25:47,330 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.6 pTM=0.0428 tol=0.0445
2023-02-21 11:25:48,266 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.2 pTM=0.0424 tol=0.0308
2023-02-21 11:25:48,266 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:25:49,205 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.0413
2023-02-21 11:25:50,140 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.6 pTM=0.0424 tol=0.295
2023-02-21 11:25:51,075 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.1 pTM=0.0425 tol=0.0548
2023-02-21 11:25:52,010 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.1 pTM=0.0424 tol=0.023
2023-02-21 11:25:52,010 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:25:52,947 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93 pTM=0.0437
2023-02-21 11:25:53,881 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.6 pTM=0.0443 tol=0.0881
2023-02-21 11:25:54,815 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.4 pTM=0.0441 tol=0.0304
2023-02-21 11:25:55,749 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.2 pTM=0.0441 tol=0.0138
2023-02-21 11:25:55,749 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:25:56,686 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.2 pTM=0.0435
2023-02-21 11:25:57,621 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.2 pTM=0.0444 tol=0.182
2023-02-21 11:25:58,556 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.1 pTM=0.0441 tol=0.0399
2023-02-21 11:25:59,491 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93 pTM=0.0439 tol=0.019
2023-02-21 11:25:59,491 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:25:59,493 reranking models by 'plddt' metric
2023-02-21 11:25:59,493 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.1 pTM=0.0424
2023-02-21 11:25:59,493 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=93 pTM=0.0439
2023-02-21 11:25:59,493 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=92.2 pTM=0.0441
2023-02-21 11:25:59,493 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.2 pTM=0.0424
2023-02-21 11:25:59,494 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.6 pTM=0.0412
2023-02-21 11:26:00,169 Query 24/80: 2ndl (length 16)
2023-02-21 11:26:01,983 Padding length to 25
2023-02-21 11:26:02,936 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.8 pTM=0.0342
2023-02-21 11:26:03,870 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.5 pTM=0.0338 tol=0.17
2023-02-21 11:26:04,803 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.7 pTM=0.0335 tol=0.145
2023-02-21 11:26:05,737 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=85.9 pTM=0.0334 tol=0.137
2023-02-21 11:26:05,737 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:26:06,674 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=87.6 pTM=0.0349
2023-02-21 11:26:07,610 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.7 pTM=0.0341 tol=0.167
2023-02-21 11:26:08,544 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.1 pTM=0.0339 tol=0.0419
2023-02-21 11:26:09,480 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86 pTM=0.0341 tol=0.0162
2023-02-21 11:26:09,480 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:10,417 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.6 pTM=0.0335
2023-02-21 11:26:11,352 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.8 pTM=0.0348 tol=0.21
2023-02-21 11:26:12,286 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.9 pTM=0.0346 tol=0.106
2023-02-21 11:26:13,221 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.8 pTM=0.035 tol=0.0878
2023-02-21 11:26:13,221 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:14,157 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.9 pTM=0.0321
2023-02-21 11:26:15,091 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=87.4 pTM=0.0341 tol=0.123
2023-02-21 11:26:16,025 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=88.2 pTM=0.035 tol=0.0325
2023-02-21 11:26:16,959 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=88.8 pTM=0.0355 tol=0.0159
2023-02-21 11:26:16,959 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:17,896 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.1 pTM=0.0376
2023-02-21 11:26:18,831 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.2 pTM=0.0381 tol=0.176
2023-02-21 11:26:19,766 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.4 pTM=0.0383 tol=0.04
2023-02-21 11:26:20,700 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.0385 tol=0.0172
2023-02-21 11:26:20,701 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:20,703 reranking models by 'plddt' metric
2023-02-21 11:26:20,703 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.0385
2023-02-21 11:26:20,703 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=88.8 pTM=0.0355
2023-02-21 11:26:20,703 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=88.8 pTM=0.035
2023-02-21 11:26:20,703 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86 pTM=0.0341
2023-02-21 11:26:20,703 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=85.9 pTM=0.0334
2023-02-21 11:26:21,486 Query 25/80: 2ndn (length 16)
2023-02-21 11:26:22,105 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:26:28,712 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:26:36,547 Padding length to 25
2023-02-21 11:26:37,504 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.8 pTM=0.0374
2023-02-21 11:26:38,438 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.9 pTM=0.0367 tol=0.263
2023-02-21 11:26:39,371 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89 pTM=0.0372 tol=0.121
2023-02-21 11:26:40,305 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.6 pTM=0.0376 tol=0.0707
2023-02-21 11:26:40,305 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:26:41,243 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.4 pTM=0.0381
2023-02-21 11:26:42,178 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.2 pTM=0.0368 tol=0.141
2023-02-21 11:26:43,113 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.3 pTM=0.0367 tol=0.023
2023-02-21 11:26:44,049 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.5 pTM=0.0368 tol=0.0125
2023-02-21 11:26:44,049 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:44,987 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90.2 pTM=0.0357
2023-02-21 11:26:45,922 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=89.8 pTM=0.0359 tol=0.255
2023-02-21 11:26:46,857 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.2 pTM=0.0362 tol=0.101
2023-02-21 11:26:47,792 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=90.4 pTM=0.0365 tol=0.233
2023-02-21 11:26:47,792 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:48,728 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.7 pTM=0.037
2023-02-21 11:26:49,662 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.7 pTM=0.0373 tol=0.16
2023-02-21 11:26:50,596 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.2 pTM=0.0378 tol=0.0326
2023-02-21 11:26:51,530 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.3 pTM=0.038 tol=0.032
2023-02-21 11:26:51,530 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:52,468 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.1 pTM=0.038
2023-02-21 11:26:53,403 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.9 pTM=0.0388 tol=0.136
2023-02-21 11:26:54,337 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.4 pTM=0.039 tol=0.0448
2023-02-21 11:26:55,273 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.0391 tol=0.0149
2023-02-21 11:26:55,273 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:26:55,275 reranking models by 'plddt' metric
2023-02-21 11:26:55,275 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.0391
2023-02-21 11:26:55,275 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=90.4 pTM=0.0365
2023-02-21 11:26:55,275 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.3 pTM=0.038
2023-02-21 11:26:55,275 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.6 pTM=0.0376
2023-02-21 11:26:55,275 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=88.5 pTM=0.0368
2023-02-21 11:26:55,926 Query 26/80: 5h1h (length 16)
2023-02-21 11:26:56,531 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:27:04,140 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:27:11,746 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:27:18,361 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:27:28,984 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:27:37,604 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:27:44,226 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:27:51,834 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:27:58,451 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:28:06,049 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:28:14,650 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:28:25,254 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:28:35,857 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:28:41,462 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:28:49,068 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:28:56,685 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:29:04,301 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:29:10,916 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:29:16,536 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:29:26,139 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:29:36,958 Padding length to 25
2023-02-21 11:29:37,922 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=75.8 pTM=0.0297
2023-02-21 11:29:38,852 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=76.6 pTM=0.0296 tol=0.177
2023-02-21 11:29:39,891 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=76.5 pTM=0.0299 tol=0.113
2023-02-21 11:29:40,821 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=76.4 pTM=0.0298 tol=0.145
2023-02-21 11:29:40,821 alphafold2_ptm_model_1_seed_000 took 3.9s (3 recycles)
2023-02-21 11:29:41,756 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=74.1 pTM=0.03
2023-02-21 11:29:42,688 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=75 pTM=0.0302 tol=0.214
2023-02-21 11:29:43,618 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=75.7 pTM=0.0301 tol=0.154
2023-02-21 11:29:44,550 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=76.8 pTM=0.0303 tol=0.111
2023-02-21 11:29:44,550 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:29:45,484 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=76.2 pTM=0.0294
2023-02-21 11:29:46,415 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.4 pTM=0.0302 tol=0.193
2023-02-21 11:29:47,346 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=78.6 pTM=0.0307 tol=0.127
2023-02-21 11:29:48,281 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=79 pTM=0.0309 tol=0.0765
2023-02-21 11:29:48,281 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:29:49,218 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=79.5 pTM=0.0305
2023-02-21 11:29:50,152 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=79.9 pTM=0.0309 tol=0.137
2023-02-21 11:29:51,086 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.4 pTM=0.0316 tol=0.0881
2023-02-21 11:29:52,021 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=81.8 pTM=0.0318 tol=0.108
2023-02-21 11:29:52,021 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:29:52,958 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=74.5 pTM=0.0286
2023-02-21 11:29:53,893 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=76.8 pTM=0.029 tol=0.295
2023-02-21 11:29:54,827 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=77.8 pTM=0.0293 tol=0.134
2023-02-21 11:29:55,762 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=78.2 pTM=0.0294 tol=0.0402
2023-02-21 11:29:55,762 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:29:55,764 reranking models by 'plddt' metric
2023-02-21 11:29:55,764 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=81.8 pTM=0.0318
2023-02-21 11:29:55,764 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=79 pTM=0.0309
2023-02-21 11:29:55,764 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=78.2 pTM=0.0294
2023-02-21 11:29:55,764 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=76.8 pTM=0.0303
2023-02-21 11:29:55,764 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=76.4 pTM=0.0298
2023-02-21 11:29:56,570 Query 27/80: 2lwv (length 17)
2023-02-21 11:29:57,173 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:30:06,785 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:30:14,421 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:30:21,036 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:30:26,653 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:30:37,273 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:30:42,875 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:30:50,475 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:30:57,073 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:31:04,908 Padding length to 25
2023-02-21 11:31:05,870 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.3 pTM=0.0349
2023-02-21 11:31:06,799 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.7 pTM=0.0353 tol=0.271
2023-02-21 11:31:07,732 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87.1 pTM=0.0353 tol=0.0792
2023-02-21 11:31:08,666 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87.2 pTM=0.0353 tol=0.0307
2023-02-21 11:31:08,666 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:31:09,603 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85 pTM=0.0352
2023-02-21 11:31:10,538 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.1 pTM=0.036 tol=0.192
2023-02-21 11:31:11,473 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=84.2 pTM=0.036 tol=0.0806
2023-02-21 11:31:12,409 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.2 pTM=0.0361 tol=0.0254
2023-02-21 11:31:12,409 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:31:13,346 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=84.4 pTM=0.0342
2023-02-21 11:31:14,281 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=85.4 pTM=0.0348 tol=0.337
2023-02-21 11:31:15,215 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=86.6 pTM=0.0351 tol=0.0932
2023-02-21 11:31:16,150 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=86.4 pTM=0.0352 tol=0.02
2023-02-21 11:31:16,150 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:31:17,089 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.2 pTM=0.0356
2023-02-21 11:31:18,023 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.2 pTM=0.0359 tol=0.16
2023-02-21 11:31:18,957 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.7 pTM=0.0361 tol=0.0587
2023-02-21 11:31:19,891 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.9 pTM=0.0363 tol=0.0239
2023-02-21 11:31:19,891 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:31:20,828 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.1 pTM=0.0355
2023-02-21 11:31:21,763 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=88.2 pTM=0.0357 tol=0.174
2023-02-21 11:31:22,697 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.2 pTM=0.0357 tol=0.0397
2023-02-21 11:31:23,632 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88.1 pTM=0.0358 tol=0.0171
2023-02-21 11:31:23,632 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:31:23,634 reranking models by 'plddt' metric
2023-02-21 11:31:23,634 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=88.1 pTM=0.0358
2023-02-21 11:31:23,634 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=87.2 pTM=0.0353
2023-02-21 11:31:23,634 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.9 pTM=0.0363
2023-02-21 11:31:23,634 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=86.4 pTM=0.0352
2023-02-21 11:31:23,634 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=84.2 pTM=0.0361
2023-02-21 11:31:24,305 Query 28/80: 2nb5 (length 17)
2023-02-21 11:31:24,920 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:31:34,519 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:31:42,129 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:31:51,743 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:31:58,344 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:32:05,948 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:32:13,541 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:32:21,150 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:32:28,757 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:32:37,719 Padding length to 25
2023-02-21 11:32:38,691 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=74.9 pTM=0.028
2023-02-21 11:32:39,624 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=82.3 pTM=0.0309 tol=0.235
2023-02-21 11:32:40,557 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=83.8 pTM=0.0317 tol=0.116
2023-02-21 11:32:41,491 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=84.4 pTM=0.032 tol=0.0548
2023-02-21 11:32:41,491 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:32:42,428 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0317
2023-02-21 11:32:43,364 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=80.2 pTM=0.0314 tol=0.204
2023-02-21 11:32:44,298 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81.2 pTM=0.0324 tol=0.0896
2023-02-21 11:32:45,234 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=81.8 pTM=0.0329 tol=0.0518
2023-02-21 11:32:45,234 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:32:46,171 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=86.4 pTM=0.0316
2023-02-21 11:32:47,106 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.5 pTM=0.0321 tol=0.209
2023-02-21 11:32:48,041 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=88.8 pTM=0.0331 tol=0.0768
2023-02-21 11:32:48,976 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.9 pTM=0.0333 tol=0.0289
2023-02-21 11:32:48,976 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:32:49,916 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=81.4 pTM=0.0296
2023-02-21 11:32:50,851 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.7 pTM=0.0331 tol=0.238
2023-02-21 11:32:51,784 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=87.5 pTM=0.0339 tol=0.0598
2023-02-21 11:32:52,718 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=87.7 pTM=0.0339 tol=0.0307
2023-02-21 11:32:52,718 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:32:53,654 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=85.3 pTM=0.032
2023-02-21 11:32:54,589 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=85.8 pTM=0.0321 tol=0.221
2023-02-21 11:32:55,523 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.1 pTM=0.0323 tol=0.0526
2023-02-21 11:32:56,457 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.2 pTM=0.0325 tol=0.0557
2023-02-21 11:32:56,458 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:32:56,460 reranking models by 'plddt' metric
2023-02-21 11:32:56,460 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=88.9 pTM=0.0333
2023-02-21 11:32:56,460 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=87.7 pTM=0.0339
2023-02-21 11:32:56,460 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=86.2 pTM=0.0325
2023-02-21 11:32:56,460 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=84.4 pTM=0.032
2023-02-21 11:32:56,460 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=81.8 pTM=0.0329
2023-02-21 11:32:57,124 Query 29/80: 1hvz (length 18)
2023-02-21 11:32:57,732 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:33:03,340 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:33:08,959 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:33:18,586 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:33:25,192 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:33:30,799 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:33:38,401 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:33:46,017 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:33:55,624 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:34:07,452 Padding length to 25
2023-02-21 11:34:08,417 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.4 pTM=0.0351
2023-02-21 11:34:09,351 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.7 pTM=0.0356 tol=0.164
2023-02-21 11:34:10,284 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.2 pTM=0.0362 tol=0.0831
2023-02-21 11:34:11,217 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.2 pTM=0.0364 tol=0.0212
2023-02-21 11:34:11,218 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:34:12,157 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.3 pTM=0.0344
2023-02-21 11:34:13,092 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.2 pTM=0.0349 tol=0.281
2023-02-21 11:34:14,027 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.4 pTM=0.0353 tol=0.14
2023-02-21 11:34:14,962 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.2 pTM=0.0355 tol=0.0808
2023-02-21 11:34:14,963 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:34:15,900 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.3 pTM=0.0352
2023-02-21 11:34:16,835 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.6 pTM=0.0355 tol=0.159
2023-02-21 11:34:17,770 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.9 pTM=0.0356 tol=0.0392
2023-02-21 11:34:18,705 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.9 pTM=0.0356 tol=0.0197
2023-02-21 11:34:18,705 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:34:19,641 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.1 pTM=0.0365
2023-02-21 11:34:20,575 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.7 pTM=0.0369 tol=0.126
2023-02-21 11:34:21,509 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.1 pTM=0.0375 tol=0.0771
2023-02-21 11:34:22,443 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.3 pTM=0.0377 tol=0.0417
2023-02-21 11:34:22,443 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:34:23,380 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.8 pTM=0.0346
2023-02-21 11:34:24,315 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.1 pTM=0.0341 tol=0.0896
2023-02-21 11:34:25,249 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.2 pTM=0.0343 tol=0.0602
2023-02-21 11:34:26,185 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.0345 tol=0.0317
2023-02-21 11:34:26,185 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:34:26,187 reranking models by 'plddt' metric
2023-02-21 11:34:26,187 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.3 pTM=0.0377
2023-02-21 11:34:26,187 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=93.9 pTM=0.0356
2023-02-21 11:34:26,187 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=92.2 pTM=0.0364
2023-02-21 11:34:26,187 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.0345
2023-02-21 11:34:26,187 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.2 pTM=0.0355
2023-02-21 11:34:26,982 Query 30/80: 2atg (length 18)
2023-02-21 11:34:27,590 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:34:33,193 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:34:43,805 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:34:50,427 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:35:00,030 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:35:08,630 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:35:14,224 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:35:21,829 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:35:33,684 Padding length to 25
2023-02-21 11:35:34,665 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.8 pTM=0.0327
2023-02-21 11:35:35,598 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.2 pTM=0.0341 tol=0.306
2023-02-21 11:35:36,531 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.3 pTM=0.0348 tol=0.0644
2023-02-21 11:35:37,465 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.6 pTM=0.0349 tol=0.0185
2023-02-21 11:35:37,465 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:35:38,402 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.1 pTM=0.0326
2023-02-21 11:35:39,338 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.4 pTM=0.0335 tol=0.702
2023-02-21 11:35:40,273 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.7 pTM=0.0338 tol=0.167
2023-02-21 11:35:41,208 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86 pTM=0.034 tol=0.0787
2023-02-21 11:35:41,208 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:35:42,145 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.1 pTM=0.0352
2023-02-21 11:35:43,080 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.4 pTM=0.0357 tol=0.109
2023-02-21 11:35:44,015 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.6 pTM=0.0359 tol=0.0433
2023-02-21 11:35:44,950 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.6 pTM=0.0359 tol=0.0219
2023-02-21 11:35:44,950 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:35:45,887 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.4 pTM=0.0358
2023-02-21 11:35:46,821 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.3 pTM=0.0367 tol=0.125
2023-02-21 11:35:47,755 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.6 pTM=0.0371 tol=0.0922
2023-02-21 11:35:48,689 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.7 pTM=0.0374 tol=0.0346
2023-02-21 11:35:48,689 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:35:49,626 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=83.8 pTM=0.032
2023-02-21 11:35:50,561 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.4 pTM=0.0329 tol=0.126
2023-02-21 11:35:51,495 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.8 pTM=0.033 tol=0.0439
2023-02-21 11:35:52,431 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.9 pTM=0.0331 tol=0.0222
2023-02-21 11:35:52,431 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:35:52,433 reranking models by 'plddt' metric
2023-02-21 11:35:52,433 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=92.7 pTM=0.0374
2023-02-21 11:35:52,433 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=91.6 pTM=0.0359
2023-02-21 11:35:52,433 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=89.6 pTM=0.0349
2023-02-21 11:35:52,433 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=86.9 pTM=0.0331
2023-02-21 11:35:52,433 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=86 pTM=0.034
2023-02-21 11:35:53,098 Query 31/80: 2lwt (length 18)
2023-02-21 11:35:53,705 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:36:04,303 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:36:13,904 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:36:23,520 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:36:33,128 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:36:38,732 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:36:44,346 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:36:52,944 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:37:04,798 Padding length to 25
2023-02-21 11:37:05,763 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.0258
2023-02-21 11:37:06,697 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=66.2 pTM=0.0253 tol=0.838
2023-02-21 11:37:07,629 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=70.1 pTM=0.0262 tol=0.263
2023-02-21 11:37:08,563 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.6 pTM=0.0273 tol=0.103
2023-02-21 11:37:08,563 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:37:09,500 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=58.4 pTM=0.0242
2023-02-21 11:37:10,435 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=56.8 pTM=0.0236 tol=0.805
2023-02-21 11:37:11,370 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=56.2 pTM=0.023 tol=0.815
2023-02-21 11:37:12,305 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=57.5 pTM=0.0236 tol=0.32
2023-02-21 11:37:12,305 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:37:13,242 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.9 pTM=0.0305
2023-02-21 11:37:14,176 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.9 pTM=0.0298 tol=0.226
2023-02-21 11:37:15,110 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.9 pTM=0.0298 tol=0.0632
2023-02-21 11:37:16,045 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.1 pTM=0.0298 tol=0.0366
2023-02-21 11:37:16,045 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:37:16,982 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.5 pTM=0.0263
2023-02-21 11:37:17,916 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=62.8 pTM=0.0242 tol=0.657
2023-02-21 11:37:18,849 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=67.6 pTM=0.0252 tol=1.31
2023-02-21 11:37:19,783 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=71.8 pTM=0.0274 tol=1.03
2023-02-21 11:37:19,783 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:37:20,720 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=81.6 pTM=0.031
2023-02-21 11:37:21,655 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.2 pTM=0.03 tol=0.885
2023-02-21 11:37:22,589 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=80.4 pTM=0.0302 tol=0.0573
2023-02-21 11:37:23,523 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.4 pTM=0.03 tol=0.0401
2023-02-21 11:37:23,523 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:37:23,525 reranking models by 'plddt' metric
2023-02-21 11:37:23,525 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=83.1 pTM=0.0298
2023-02-21 11:37:23,525 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=80.4 pTM=0.03
2023-02-21 11:37:23,526 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=73.6 pTM=0.0273
2023-02-21 11:37:23,526 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=71.8 pTM=0.0274
2023-02-21 11:37:23,526 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=57.5 pTM=0.0236
2023-02-21 11:37:24,335 Query 32/80: 2lye (length 18)
2023-02-21 11:37:24,959 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:37:33,559 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:37:42,163 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:37:47,764 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:37:55,379 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:38:01,973 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:38:11,563 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:38:17,176 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:38:27,775 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:38:39,619 Padding length to 25
2023-02-21 11:38:40,604 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=92.1 pTM=0.0361
2023-02-21 11:38:41,537 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92.3 pTM=0.0361 tol=0.0845
2023-02-21 11:38:42,470 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.4 pTM=0.0363 tol=0.0848
2023-02-21 11:38:43,404 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.4 pTM=0.0363 tol=0.0541
2023-02-21 11:38:43,404 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:38:44,342 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.2 pTM=0.0355
2023-02-21 11:38:45,277 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.2 pTM=0.0346 tol=0.213
2023-02-21 11:38:46,211 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.8 pTM=0.0345 tol=0.153
2023-02-21 11:38:47,146 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.7 pTM=0.0348 tol=0.0916
2023-02-21 11:38:47,147 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:38:48,084 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=94.2 pTM=0.0357
2023-02-21 11:38:49,019 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=94.4 pTM=0.0357 tol=0.188
2023-02-21 11:38:49,953 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.6 pTM=0.0357 tol=0.123
2023-02-21 11:38:50,888 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.6 pTM=0.0356 tol=0.0372
2023-02-21 11:38:50,888 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:38:51,825 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.4 pTM=0.037
2023-02-21 11:38:52,759 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.7 pTM=0.037 tol=0.137
2023-02-21 11:38:53,693 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95 pTM=0.0375 tol=0.193
2023-02-21 11:38:54,627 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.2 pTM=0.0378 tol=0.121
2023-02-21 11:38:54,627 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:38:55,564 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=92.3 pTM=0.0362
2023-02-21 11:38:56,499 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.2 pTM=0.036 tol=0.17
2023-02-21 11:38:57,433 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.2 pTM=0.0361 tol=0.0194
2023-02-21 11:38:58,368 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.2 pTM=0.036 tol=0.0141
2023-02-21 11:38:58,368 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:38:58,374 reranking models by 'plddt' metric
2023-02-21 11:38:58,374 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.2 pTM=0.0378
2023-02-21 11:38:58,374 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.6 pTM=0.0356
2023-02-21 11:38:58,374 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=92.4 pTM=0.0363
2023-02-21 11:38:58,374 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=92.2 pTM=0.036
2023-02-21 11:38:58,374 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=89.7 pTM=0.0348
2023-02-21 11:38:59,043 Query 33/80: 2lyf (length 18)
2023-02-21 11:38:59,661 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:39:10,267 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:39:16,876 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:39:25,500 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:39:32,100 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:39:40,704 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:39:48,303 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:39:53,902 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:40:03,860 Padding length to 25
2023-02-21 11:40:04,833 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.4 pTM=0.0351
2023-02-21 11:40:05,766 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.7 pTM=0.0356 tol=0.164
2023-02-21 11:40:06,699 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.2 pTM=0.0362 tol=0.0831
2023-02-21 11:40:07,633 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.2 pTM=0.0364 tol=0.0212
2023-02-21 11:40:07,633 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:40:08,570 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.3 pTM=0.0344
2023-02-21 11:40:09,506 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.2 pTM=0.0349 tol=0.281
2023-02-21 11:40:10,442 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.4 pTM=0.0353 tol=0.14
2023-02-21 11:40:11,377 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.2 pTM=0.0355 tol=0.0808
2023-02-21 11:40:11,377 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:40:12,314 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.3 pTM=0.0352
2023-02-21 11:40:13,249 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.6 pTM=0.0355 tol=0.159
2023-02-21 11:40:14,183 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.9 pTM=0.0356 tol=0.0392
2023-02-21 11:40:15,118 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.9 pTM=0.0356 tol=0.0197
2023-02-21 11:40:15,118 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:40:16,055 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=94.1 pTM=0.0365
2023-02-21 11:40:16,989 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.7 pTM=0.0369 tol=0.126
2023-02-21 11:40:17,922 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=95.1 pTM=0.0375 tol=0.0771
2023-02-21 11:40:18,856 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=95.3 pTM=0.0377 tol=0.0417
2023-02-21 11:40:18,856 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:40:19,793 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.8 pTM=0.0346
2023-02-21 11:40:20,727 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.1 pTM=0.0341 tol=0.0896
2023-02-21 11:40:21,661 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.2 pTM=0.0343 tol=0.0602
2023-02-21 11:40:22,596 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.0345 tol=0.0317
2023-02-21 11:40:22,596 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:40:22,598 reranking models by 'plddt' metric
2023-02-21 11:40:22,598 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=95.3 pTM=0.0377
2023-02-21 11:40:22,598 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=93.9 pTM=0.0356
2023-02-21 11:40:22,599 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=92.2 pTM=0.0364
2023-02-21 11:40:22,599 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.0345
2023-02-21 11:40:22,599 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.2 pTM=0.0355
2023-02-21 11:40:23,259 Query 34/80: 2lzi (length 18)
2023-02-21 11:40:23,858 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:40:32,461 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:40:43,066 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:40:51,662 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:41:00,276 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:41:10,882 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:41:19,483 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:41:26,090 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:41:36,922 Padding length to 25
2023-02-21 11:41:37,888 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.4 pTM=0.0331
2023-02-21 11:41:38,821 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.2 pTM=0.0345 tol=0.243
2023-02-21 11:41:39,754 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90.1 pTM=0.0354 tol=0.162
2023-02-21 11:41:40,687 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.2 pTM=0.0356 tol=0.0231
2023-02-21 11:41:40,688 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:41:41,625 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.2 pTM=0.032
2023-02-21 11:41:42,560 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.2 pTM=0.0334 tol=0.248
2023-02-21 11:41:43,494 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.7 pTM=0.0338 tol=0.11
2023-02-21 11:41:44,430 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.1 pTM=0.034 tol=0.0763
2023-02-21 11:41:44,430 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:41:45,367 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.0347
2023-02-21 11:41:46,301 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.6 pTM=0.0357 tol=0.111
2023-02-21 11:41:47,236 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.1 pTM=0.036 tol=0.0374
2023-02-21 11:41:48,170 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.2 pTM=0.036 tol=0.0282
2023-02-21 11:41:48,170 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:41:49,111 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=90.2 pTM=0.0352
2023-02-21 11:41:50,045 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.7 pTM=0.0362 tol=0.17
2023-02-21 11:41:50,978 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.5 pTM=0.0366 tol=0.101
2023-02-21 11:41:51,912 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.9 pTM=0.0371 tol=0.0468
2023-02-21 11:41:51,912 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:41:52,849 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.2 pTM=0.0316
2023-02-21 11:41:53,786 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.5 pTM=0.0328 tol=0.133
2023-02-21 11:41:54,719 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.6 pTM=0.0334 tol=0.0854
2023-02-21 11:41:55,654 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89 pTM=0.0335 tol=0.0386
2023-02-21 11:41:55,654 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:41:55,656 reranking models by 'plddt' metric
2023-02-21 11:41:55,656 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=93.9 pTM=0.0371
2023-02-21 11:41:55,656 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=93.2 pTM=0.036
2023-02-21 11:41:55,656 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=90.2 pTM=0.0356
2023-02-21 11:41:55,656 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=89 pTM=0.0335
2023-02-21 11:41:55,656 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.1 pTM=0.034
2023-02-21 11:41:56,455 Query 35/80: 2m77 (length 18)
2023-02-21 11:41:57,046 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:42:03,646 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:42:14,247 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:42:22,869 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:42:30,485 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:42:36,097 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:42:46,716 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:42:53,310 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:43:05,171 Padding length to 25
2023-02-21 11:43:06,148 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=91.4 pTM=0.0351
2023-02-21 11:43:07,082 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.6 pTM=0.0358 tol=0.106
2023-02-21 11:43:08,015 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.8 pTM=0.0362 tol=0.0724
2023-02-21 11:43:08,948 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.9 pTM=0.0364 tol=0.0202
2023-02-21 11:43:08,948 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:43:09,891 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.5 pTM=0.035
2023-02-21 11:43:10,826 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.6 pTM=0.0345 tol=0.282
2023-02-21 11:43:11,761 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.6 pTM=0.0351 tol=0.129
2023-02-21 11:43:12,697 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.6 pTM=0.0353 tol=0.0523
2023-02-21 11:43:12,697 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:43:13,634 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.6 pTM=0.0348
2023-02-21 11:43:14,569 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.5 pTM=0.0351 tol=0.16
2023-02-21 11:43:15,503 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.4 pTM=0.0354 tol=0.0378
2023-02-21 11:43:16,439 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.0353 tol=0.0228
2023-02-21 11:43:16,439 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:43:17,375 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.6 pTM=0.0356
2023-02-21 11:43:18,310 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.2 pTM=0.0363 tol=0.181
2023-02-21 11:43:19,243 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.2 pTM=0.037 tol=0.0807
2023-02-21 11:43:20,178 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.3 pTM=0.0371 tol=0.14
2023-02-21 11:43:20,178 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:43:21,119 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.7 pTM=0.0351
2023-02-21 11:43:22,053 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92 pTM=0.0351 tol=0.129
2023-02-21 11:43:22,987 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92 pTM=0.0355 tol=0.143
2023-02-21 11:43:23,922 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.2 pTM=0.0356 tol=0.0476
2023-02-21 11:43:23,922 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:43:23,924 reranking models by 'plddt' metric
2023-02-21 11:43:23,924 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=93.3 pTM=0.0371
2023-02-21 11:43:23,924 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.0353
2023-02-21 11:43:23,924 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=92.2 pTM=0.0356
2023-02-21 11:43:23,924 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=91.9 pTM=0.0364
2023-02-21 11:43:23,924 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=90.6 pTM=0.0353
2023-02-21 11:43:24,589 Query 36/80: 2m78 (length 18)
2023-02-21 11:43:25,178 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:43:30,792 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:43:41,392 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:43:49,997 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:43:57,613 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:44:08,224 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:44:14,829 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:44:21,443 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:44:29,038 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:44:38,853 Padding length to 25
2023-02-21 11:44:39,832 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.4 pTM=0.0346
2023-02-21 11:44:40,770 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.4 pTM=0.0356 tol=0.2
2023-02-21 11:44:41,703 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.7 pTM=0.0361 tol=0.0584
2023-02-21 11:44:42,637 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.8 pTM=0.0362 tol=0.0342
2023-02-21 11:44:42,637 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:44:43,574 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.2 pTM=0.0344
2023-02-21 11:44:44,510 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=89.7 pTM=0.0349 tol=0.184
2023-02-21 11:44:45,444 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.8 pTM=0.0355 tol=0.103
2023-02-21 11:44:46,380 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.9 pTM=0.0356 tol=0.03
2023-02-21 11:44:46,380 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:44:47,317 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.2 pTM=0.0349
2023-02-21 11:44:48,252 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.5 pTM=0.0351 tol=0.16
2023-02-21 11:44:49,186 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.0352 tol=0.0447
2023-02-21 11:44:50,121 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.9 pTM=0.0352 tol=0.0288
2023-02-21 11:44:50,121 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:44:51,062 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.1 pTM=0.0357
2023-02-21 11:44:51,998 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.5 pTM=0.0363 tol=0.112
2023-02-21 11:44:52,931 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.9 pTM=0.0368 tol=0.051
2023-02-21 11:44:53,865 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.1 pTM=0.037 tol=0.0296
2023-02-21 11:44:53,865 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:44:54,806 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.2 pTM=0.0346
2023-02-21 11:44:55,740 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.4 pTM=0.0341 tol=0.0912
2023-02-21 11:44:56,674 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.5 pTM=0.0343 tol=0.0323
2023-02-21 11:44:57,609 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.4 pTM=0.0343 tol=0.0195
2023-02-21 11:44:57,609 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:44:57,611 reranking models by 'plddt' metric
2023-02-21 11:44:57,611 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=94.1 pTM=0.037
2023-02-21 11:44:57,611 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.9 pTM=0.0352
2023-02-21 11:44:57,612 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=91.8 pTM=0.0362
2023-02-21 11:44:57,612 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.9 pTM=0.0356
2023-02-21 11:44:57,612 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=90.4 pTM=0.0343
2023-02-21 11:44:58,423 Query 37/80: 2m79 (length 18)
2023-02-21 11:44:59,015 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:45:06,624 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:45:16,245 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:45:25,868 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:45:36,477 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:45:43,092 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:45:49,690 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:45:56,295 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:46:06,154 Padding length to 25
2023-02-21 11:46:07,127 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.8 pTM=0.0334
2023-02-21 11:46:08,060 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.6 pTM=0.0346 tol=0.194
2023-02-21 11:46:08,993 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.0351 tol=0.0729
2023-02-21 11:46:09,927 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.9 pTM=0.0352 tol=0.0322
2023-02-21 11:46:09,927 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:46:10,865 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.1 pTM=0.0341
2023-02-21 11:46:11,800 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.8 pTM=0.0344 tol=0.257
2023-02-21 11:46:12,735 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.8 pTM=0.0346 tol=0.0797
2023-02-21 11:46:13,670 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.9 pTM=0.0346 tol=0.0377
2023-02-21 11:46:13,670 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:46:14,607 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91 pTM=0.0345
2023-02-21 11:46:15,542 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.5 pTM=0.034 tol=0.134
2023-02-21 11:46:16,476 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.5 pTM=0.034 tol=0.0397
2023-02-21 11:46:17,411 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=90.6 pTM=0.0341 tol=0.0576
2023-02-21 11:46:17,411 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:46:18,348 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.4 pTM=0.0349
2023-02-21 11:46:19,282 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.3 pTM=0.0357 tol=0.175
2023-02-21 11:46:20,215 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.6 pTM=0.0359 tol=0.048
2023-02-21 11:46:21,149 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.8 pTM=0.0359 tol=0.0152
2023-02-21 11:46:21,149 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:46:22,087 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.1 pTM=0.0347
2023-02-21 11:46:23,021 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.4 pTM=0.0346 tol=0.129
2023-02-21 11:46:23,955 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.6 pTM=0.0349 tol=0.0374
2023-02-21 11:46:24,890 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.7 pTM=0.0349 tol=0.0311
2023-02-21 11:46:24,890 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:46:24,892 reranking models by 'plddt' metric
2023-02-21 11:46:24,892 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=92.8 pTM=0.0359
2023-02-21 11:46:24,892 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=90.7 pTM=0.0349
2023-02-21 11:46:24,892 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=90.6 pTM=0.0341
2023-02-21 11:46:24,892 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=89.9 pTM=0.0352
2023-02-21 11:46:24,893 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=88.9 pTM=0.0346
2023-02-21 11:46:25,564 Query 38/80: 5h1i (length 18)
2023-02-21 11:46:26,174 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:46:31,763 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:46:42,371 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:46:52,979 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:47:03,591 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:47:09,214 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:47:19,826 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:47:27,434 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:47:36,406 Padding length to 25
2023-02-21 11:47:37,383 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=62.3 pTM=0.0234
2023-02-21 11:47:38,316 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=63.3 pTM=0.0248 tol=2.9
2023-02-21 11:47:39,249 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.0252 tol=0.556
2023-02-21 11:47:40,183 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=64.6 pTM=0.0254 tol=0.203
2023-02-21 11:47:40,183 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:47:41,120 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=61 pTM=0.0228
2023-02-21 11:47:42,056 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=62.7 pTM=0.0239 tol=1.65
2023-02-21 11:47:42,990 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=63.6 pTM=0.0247 tol=0.545
2023-02-21 11:47:43,925 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=63.9 pTM=0.0247 tol=0.137
2023-02-21 11:47:43,925 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:47:44,862 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=62.2 pTM=0.0224
2023-02-21 11:47:45,797 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=61 pTM=0.0225 tol=1.57
2023-02-21 11:47:46,731 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=62.7 pTM=0.0229 tol=1.23
2023-02-21 11:47:47,666 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=62 pTM=0.0231 tol=0.929
2023-02-21 11:47:47,666 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:47:48,606 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=61.9 pTM=0.0225
2023-02-21 11:47:49,540 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=62.2 pTM=0.0226 tol=0.94
2023-02-21 11:47:50,473 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=61.9 pTM=0.0232 tol=1.05
2023-02-21 11:47:51,407 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=62.3 pTM=0.0236 tol=0.388
2023-02-21 11:47:51,407 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:47:52,344 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=60.8 pTM=0.0231
2023-02-21 11:47:53,278 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=63.3 pTM=0.0244 tol=1.37
2023-02-21 11:47:54,212 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=65.5 pTM=0.0248 tol=0.542
2023-02-21 11:47:55,146 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=66.9 pTM=0.0251 tol=0.213
2023-02-21 11:47:55,146 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:47:55,148 reranking models by 'plddt' metric
2023-02-21 11:47:55,148 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=66.9 pTM=0.0251
2023-02-21 11:47:55,148 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=64.6 pTM=0.0254
2023-02-21 11:47:55,148 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=63.9 pTM=0.0247
2023-02-21 11:47:55,148 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=62.3 pTM=0.0236
2023-02-21 11:47:55,148 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=62 pTM=0.0231
2023-02-21 11:47:55,809 Query 39/80: 6pin (length 18)
2023-02-21 11:47:56,412 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:48:03,028 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:48:13,633 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:48:19,250 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:48:27,880 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:48:36,484 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:48:45,082 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:48:54,686 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:49:06,530 Padding length to 25
2023-02-21 11:49:07,499 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.5 pTM=0.0333
2023-02-21 11:49:08,433 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.8 pTM=0.0351 tol=0.209
2023-02-21 11:49:09,366 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.0355 tol=0.0897
2023-02-21 11:49:10,300 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.8 pTM=0.0356 tol=0.0227
2023-02-21 11:49:10,300 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:49:11,238 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.8 pTM=0.0343
2023-02-21 11:49:12,173 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.9 pTM=0.0352 tol=0.199
2023-02-21 11:49:13,108 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.6 pTM=0.035 tol=0.107
2023-02-21 11:49:14,043 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.6 pTM=0.0349 tol=0.151
2023-02-21 11:49:14,043 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:49:14,980 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.1 pTM=0.0344
2023-02-21 11:49:15,915 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.3 pTM=0.0354 tol=0.119
2023-02-21 11:49:16,850 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.2 pTM=0.0356 tol=0.0537
2023-02-21 11:49:17,784 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.8 pTM=0.0356 tol=0.0329
2023-02-21 11:49:17,785 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:49:18,726 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.4 pTM=0.0357
2023-02-21 11:49:19,660 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.5 pTM=0.036 tol=0.161
2023-02-21 11:49:20,594 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.9 pTM=0.0359 tol=0.0583
2023-02-21 11:49:21,527 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.9 pTM=0.0358 tol=0.0324
2023-02-21 11:49:21,528 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:49:22,465 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.0337
2023-02-21 11:49:23,400 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.7 pTM=0.0356 tol=0.133
2023-02-21 11:49:24,334 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.9 pTM=0.0358 tol=0.0317
2023-02-21 11:49:25,269 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.2 pTM=0.0357 tol=0.0465
2023-02-21 11:49:25,269 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:49:25,271 reranking models by 'plddt' metric
2023-02-21 11:49:25,271 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.8 pTM=0.0356
2023-02-21 11:49:25,271 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=93.2 pTM=0.0357
2023-02-21 11:49:25,271 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=92.9 pTM=0.0358
2023-02-21 11:49:25,271 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.8 pTM=0.0356
2023-02-21 11:49:25,271 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.6 pTM=0.0349
2023-02-21 11:49:26,065 Query 40/80: 6pio (length 18)
2023-02-21 11:49:26,671 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:49:37,280 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:49:47,885 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:49:54,494 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:50:02,100 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:50:08,710 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:50:14,332 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:50:23,937 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:50:35,791 Padding length to 25
2023-02-21 11:50:36,780 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.7 pTM=0.0341
2023-02-21 11:50:37,714 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=92 pTM=0.0356 tol=0.226
2023-02-21 11:50:38,649 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.6 pTM=0.036 tol=0.0693
2023-02-21 11:50:39,583 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.8 pTM=0.036 tol=0.0438
2023-02-21 11:50:39,583 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:50:40,522 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.9 pTM=0.0349
2023-02-21 11:50:41,458 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=92.7 pTM=0.0359 tol=0.23
2023-02-21 11:50:42,393 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=92.4 pTM=0.0359 tol=0.0739
2023-02-21 11:50:43,328 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=92.1 pTM=0.0357 tol=0.0364
2023-02-21 11:50:43,328 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:50:44,266 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.3 pTM=0.0352
2023-02-21 11:50:45,201 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.9 pTM=0.0361 tol=0.0974
2023-02-21 11:50:46,135 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.1 pTM=0.0363 tol=0.0284
2023-02-21 11:50:47,071 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.1 pTM=0.0363 tol=0.0198
2023-02-21 11:50:47,071 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:50:48,008 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.4 pTM=0.0367
2023-02-21 11:50:48,942 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=93.3 pTM=0.0366 tol=0.167
2023-02-21 11:50:49,876 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.5 pTM=0.0366 tol=0.0544
2023-02-21 11:50:50,810 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.6 pTM=0.0366 tol=0.0381
2023-02-21 11:50:50,810 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:50:51,748 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.9 pTM=0.0338
2023-02-21 11:50:52,683 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.8 pTM=0.0366 tol=0.163
2023-02-21 11:50:53,617 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=94.1 pTM=0.0367 tol=0.0296
2023-02-21 11:50:54,552 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=94.1 pTM=0.0366 tol=0.0156
2023-02-21 11:50:54,552 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:50:54,554 reranking models by 'plddt' metric
2023-02-21 11:50:54,554 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=94.1 pTM=0.0363
2023-02-21 11:50:54,554 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=94.1 pTM=0.0366
2023-02-21 11:50:54,555 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.6 pTM=0.0366
2023-02-21 11:50:54,555 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.8 pTM=0.036
2023-02-21 11:50:54,555 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=92.1 pTM=0.0357
2023-02-21 11:50:55,228 Query 41/80: 6pip (length 18)
2023-02-21 11:50:55,835 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:51:02,448 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 11:51:11,065 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 11:51:21,692 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 11:51:29,309 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:51:35,921 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:51:41,530 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 11:51:51,135 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 11:51:57,732 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 11:52:04,586 Padding length to 25
2023-02-21 11:52:05,560 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.7 pTM=0.0338
2023-02-21 11:52:06,491 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.8 pTM=0.0354 tol=0.156
2023-02-21 11:52:07,424 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=92.3 pTM=0.0358 tol=0.0827
2023-02-21 11:52:08,358 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=92.5 pTM=0.0359 tol=0.0365
2023-02-21 11:52:08,358 alphafold2_ptm_model_1_seed_000 took 3.8s (3 recycles)
2023-02-21 11:52:09,297 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.2 pTM=0.0345
2023-02-21 11:52:10,236 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.8 pTM=0.0354 tol=0.212
2023-02-21 11:52:11,171 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.4 pTM=0.0351 tol=0.14
2023-02-21 11:52:12,107 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.4 pTM=0.0349 tol=0.0556
2023-02-21 11:52:12,107 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:13,045 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.3 pTM=0.0348
2023-02-21 11:52:13,980 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.4 pTM=0.0359 tol=0.131
2023-02-21 11:52:14,915 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94 pTM=0.036 tol=0.0318
2023-02-21 11:52:15,850 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.9 pTM=0.0361 tol=0.0205
2023-02-21 11:52:15,850 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:16,787 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=92.5 pTM=0.036
2023-02-21 11:52:17,721 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.7 pTM=0.0361 tol=0.177
2023-02-21 11:52:18,655 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=93.1 pTM=0.0361 tol=0.0533
2023-02-21 11:52:19,592 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=93.1 pTM=0.036 tol=0.0338
2023-02-21 11:52:19,592 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:20,529 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.4 pTM=0.0342
2023-02-21 11:52:21,464 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.6 pTM=0.0367 tol=0.144
2023-02-21 11:52:22,399 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.9 pTM=0.0366 tol=0.0241
2023-02-21 11:52:23,333 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.8 pTM=0.0365 tol=0.0177
2023-02-21 11:52:23,334 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:23,336 reranking models by 'plddt' metric
2023-02-21 11:52:23,336 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.9 pTM=0.0361
2023-02-21 11:52:23,336 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=93.8 pTM=0.0365
2023-02-21 11:52:23,336 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=93.1 pTM=0.036
2023-02-21 11:52:23,336 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=92.5 pTM=0.0359
2023-02-21 11:52:23,336 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=91.4 pTM=0.0349
2023-02-21 11:52:24,143 Query 42/80: 7f32 (length 18)
2023-02-21 11:52:25,982 Padding length to 25
2023-02-21 11:52:26,928 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.6 pTM=0.0335
2023-02-21 11:52:27,861 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=91.1 pTM=0.034 tol=0.121
2023-02-21 11:52:28,794 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=91.4 pTM=0.0346 tol=0.0831
2023-02-21 11:52:29,728 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=91.6 pTM=0.0349 tol=0.0403
2023-02-21 11:52:29,728 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:30,666 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.4 pTM=0.0341
2023-02-21 11:52:31,602 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91 pTM=0.0341 tol=0.407
2023-02-21 11:52:32,537 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.4 pTM=0.035 tol=0.255
2023-02-21 11:52:33,472 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.6 pTM=0.0355 tol=0.129
2023-02-21 11:52:33,472 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:34,410 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=93.4 pTM=0.0346
2023-02-21 11:52:35,346 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.9 pTM=0.0353 tol=0.0833
2023-02-21 11:52:36,280 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=94.2 pTM=0.0356 tol=0.0461
2023-02-21 11:52:37,215 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.2 pTM=0.0358 tol=0.0188
2023-02-21 11:52:37,216 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:38,152 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=93.9 pTM=0.0357
2023-02-21 11:52:39,086 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=94.4 pTM=0.0365 tol=0.195
2023-02-21 11:52:40,025 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=94.8 pTM=0.0372 tol=0.0562
2023-02-21 11:52:40,960 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=94.9 pTM=0.0373 tol=0.0369
2023-02-21 11:52:40,960 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:41,897 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=93.3 pTM=0.0349
2023-02-21 11:52:42,832 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=93.4 pTM=0.0348 tol=0.113
2023-02-21 11:52:43,767 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.8 pTM=0.0353 tol=0.0729
2023-02-21 11:52:44,702 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.9 pTM=0.0355 tol=0.0394
2023-02-21 11:52:44,702 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:44,704 reranking models by 'plddt' metric
2023-02-21 11:52:44,704 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=94.9 pTM=0.0373
2023-02-21 11:52:44,704 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=94.2 pTM=0.0358
2023-02-21 11:52:44,705 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=93.9 pTM=0.0355
2023-02-21 11:52:44,705 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.6 pTM=0.0355
2023-02-21 11:52:44,705 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=91.6 pTM=0.0349
2023-02-21 11:52:45,372 Query 43/80: 2ll5 (length 22)
2023-02-21 11:52:47,331 Padding length to 25
2023-02-21 11:52:48,279 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=76 pTM=0.196
2023-02-21 11:52:49,213 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=83.4 pTM=0.231 tol=1.12
2023-02-21 11:52:50,146 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.8 pTM=0.261 tol=0.289
2023-02-21 11:52:51,080 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.4 pTM=0.265 tol=0.0747
2023-02-21 11:52:51,080 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:52,018 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=83.9 pTM=0.229
2023-02-21 11:52:52,953 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=91.1 pTM=0.27 tol=0.412
2023-02-21 11:52:53,888 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=91.6 pTM=0.274 tol=0.065
2023-02-21 11:52:54,829 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91.8 pTM=0.275 tol=0.0265
2023-02-21 11:52:54,829 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:55,767 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.9 pTM=0.23
2023-02-21 11:52:56,702 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.9 pTM=0.268 tol=0.22
2023-02-21 11:52:57,636 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.2 pTM=0.269 tol=0.0437
2023-02-21 11:52:58,572 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.1 pTM=0.27 tol=0.075
2023-02-21 11:52:58,572 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:52:59,509 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.5 pTM=0.24
2023-02-21 11:53:00,443 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.8 pTM=0.271 tol=0.22
2023-02-21 11:53:01,377 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.6 pTM=0.276 tol=0.0446
2023-02-21 11:53:02,311 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.7 pTM=0.277 tol=0.013
2023-02-21 11:53:02,312 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:03,249 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.8 pTM=0.25
2023-02-21 11:53:04,184 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.9 pTM=0.273 tol=0.212
2023-02-21 11:53:05,118 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=93.2 pTM=0.274 tol=0.0349
2023-02-21 11:53:06,053 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.2 pTM=0.274 tol=0.0132
2023-02-21 11:53:06,053 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:06,055 reranking models by 'plddt' metric
2023-02-21 11:53:06,055 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.2 pTM=0.274
2023-02-21 11:53:06,056 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=92.7 pTM=0.277
2023-02-21 11:53:06,056 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=92.1 pTM=0.27
2023-02-21 11:53:06,056 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91.8 pTM=0.275
2023-02-21 11:53:06,056 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90.4 pTM=0.265
2023-02-21 11:53:06,727 Query 44/80: 2n07.1_X (length 22)
2023-02-21 11:53:08,567 Padding length to 25
2023-02-21 11:53:09,511 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=69.8 pTM=0.142
2023-02-21 11:53:10,445 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.185 tol=0.806
2023-02-21 11:53:11,378 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=76.2 pTM=0.191 tol=0.365
2023-02-21 11:53:12,311 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=76.4 pTM=0.192 tol=0.0482
2023-02-21 11:53:12,311 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:13,249 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=68.7 pTM=0.153
2023-02-21 11:53:14,184 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=74.9 pTM=0.189 tol=1.86
2023-02-21 11:53:15,119 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=75 pTM=0.193 tol=0.208
2023-02-21 11:53:16,054 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=74.6 pTM=0.193 tol=0.309
2023-02-21 11:53:16,054 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:16,992 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=63 pTM=0.104
2023-02-21 11:53:17,926 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=58.5 pTM=0.0972 tol=1.26
2023-02-21 11:53:18,861 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=58.3 pTM=0.0968 tol=0.806
2023-02-21 11:53:19,795 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=57.2 pTM=0.0967 tol=1.67
2023-02-21 11:53:19,796 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:20,732 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=68.2 pTM=0.114
2023-02-21 11:53:21,667 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=65.6 pTM=0.107 tol=1.11
2023-02-21 11:53:22,600 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=63.6 pTM=0.108 tol=0.812
2023-02-21 11:53:23,534 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=62.3 pTM=0.107 tol=0.486
2023-02-21 11:53:23,534 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:24,472 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=73.1 pTM=0.144
2023-02-21 11:53:25,411 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=77.3 pTM=0.191 tol=0.763
2023-02-21 11:53:26,346 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=77.8 pTM=0.198 tol=0.233
2023-02-21 11:53:27,282 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=78.1 pTM=0.199 tol=0.136
2023-02-21 11:53:27,282 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:27,284 reranking models by 'plddt' metric
2023-02-21 11:53:27,284 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=78.1 pTM=0.199
2023-02-21 11:53:27,284 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=76.4 pTM=0.192
2023-02-21 11:53:27,284 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=74.6 pTM=0.193
2023-02-21 11:53:27,284 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=62.3 pTM=0.107
2023-02-21 11:53:27,284 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=57.2 pTM=0.0967
2023-02-21 11:53:28,093 Query 45/80: 5kx1 (length 22)
2023-02-21 11:53:29,945 Padding length to 25
2023-02-21 11:53:30,891 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=74.1 pTM=0.16
2023-02-21 11:53:31,824 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.5 pTM=0.185 tol=0.453
2023-02-21 11:53:32,757 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.1 pTM=0.185 tol=0.0873
2023-02-21 11:53:33,691 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.3 pTM=0.185 tol=0.0271
2023-02-21 11:53:33,691 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:34,629 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.141
2023-02-21 11:53:35,565 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=83.8 pTM=0.182 tol=1.18
2023-02-21 11:53:36,500 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.8 pTM=0.179 tol=0.191
2023-02-21 11:53:37,435 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.5 pTM=0.18 tol=0.0474
2023-02-21 11:53:37,435 alphafold2_ptm_model_2_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:38,373 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=84.4 pTM=0.178
2023-02-21 11:53:39,309 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.8 pTM=0.182 tol=0.321
2023-02-21 11:53:40,248 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.7 pTM=0.191 tol=0.0822
2023-02-21 11:53:41,183 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.6 pTM=0.195 tol=0.0452
2023-02-21 11:53:41,183 alphafold2_ptm_model_3_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:42,120 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.1 pTM=0.154
2023-02-21 11:53:43,054 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85.7 pTM=0.183 tol=0.485
2023-02-21 11:53:43,988 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86 pTM=0.183 tol=0.0817
2023-02-21 11:53:44,922 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.2 pTM=0.182 tol=0.0312
2023-02-21 11:53:44,922 alphafold2_ptm_model_4_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:45,860 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=76.7 pTM=0.15
2023-02-21 11:53:46,795 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=82.8 pTM=0.164 tol=0.471
2023-02-21 11:53:47,729 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.6 pTM=0.167 tol=0.142
2023-02-21 11:53:48,664 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=83.9 pTM=0.17 tol=0.101
2023-02-21 11:53:48,664 alphafold2_ptm_model_5_seed_000 took 3.7s (3 recycles)
2023-02-21 11:53:48,667 reranking models by 'plddt' metric
2023-02-21 11:53:48,667 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=88.6 pTM=0.195
2023-02-21 11:53:48,667 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=86.3 pTM=0.185
2023-02-21 11:53:48,667 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.2 pTM=0.182
2023-02-21 11:53:48,667 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=84.5 pTM=0.18
2023-02-21 11:53:48,667 rank_005_alphafold2_ptm_model_5_seed_000 pLDDT=83.9 pTM=0.17
2023-02-21 11:53:49,342 Query 46/80: 5kwz (length 26)
2023-02-21 11:53:51,194 Padding length to 36
2023-02-21 11:53:58,542 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87.1 pTM=0.329
2023-02-21 11:53:59,418 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.5 pTM=0.343 tol=0.135
2023-02-21 11:54:00,293 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.6 pTM=0.348 tol=0.0334
2023-02-21 11:54:01,169 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.6 pTM=0.35 tol=0.0293
2023-02-21 11:54:01,169 alphafold2_ptm_model_1_seed_000 took 10.0s (3 recycles)
2023-02-21 11:54:02,050 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89.2 pTM=0.372
2023-02-21 11:54:02,928 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.2 pTM=0.385 tol=0.12
2023-02-21 11:54:03,805 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.3 pTM=0.388 tol=0.033
2023-02-21 11:54:04,683 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.3 pTM=0.389 tol=0.015
2023-02-21 11:54:04,683 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:05,564 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=92.8 pTM=0.381
2023-02-21 11:54:06,441 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=93.3 pTM=0.388 tol=0.12
2023-02-21 11:54:07,319 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=93.1 pTM=0.387 tol=0.0387
2023-02-21 11:54:08,196 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=94.2 pTM=0.388 tol=0.102
2023-02-21 11:54:08,197 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:09,075 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.7 pTM=0.376
2023-02-21 11:54:09,950 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=92.1 pTM=0.386 tol=0.142
2023-02-21 11:54:10,825 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=92.5 pTM=0.397 tol=0.053
2023-02-21 11:54:11,701 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=92.6 pTM=0.399 tol=0.0223
2023-02-21 11:54:11,701 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:12,581 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.2 pTM=0.369
2023-02-21 11:54:13,459 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=92.2 pTM=0.38 tol=0.0944
2023-02-21 11:54:14,336 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.2 pTM=0.381 tol=0.0418
2023-02-21 11:54:15,214 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.1 pTM=0.382 tol=0.014
2023-02-21 11:54:15,214 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:15,217 reranking models by 'plddt' metric
2023-02-21 11:54:15,217 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=94.2 pTM=0.388
2023-02-21 11:54:15,217 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=92.6 pTM=0.399
2023-02-21 11:54:15,217 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=92.1 pTM=0.382
2023-02-21 11:54:15,217 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=90.3 pTM=0.389
2023-02-21 11:54:15,217 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.6 pTM=0.35
2023-02-21 11:54:15,875 Query 47/80: 7m3u (length 27)
2023-02-21 11:54:17,729 Padding length to 36
2023-02-21 11:54:18,616 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=53 pTM=0.126
2023-02-21 11:54:19,491 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=56.3 pTM=0.148 tol=1.91
2023-02-21 11:54:20,365 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=59.9 pTM=0.167 tol=0.705
2023-02-21 11:54:21,240 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=62 pTM=0.176 tol=0.3
2023-02-21 11:54:21,240 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:22,121 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=54.3 pTM=0.149
2023-02-21 11:54:22,998 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=54.5 pTM=0.153 tol=1.19
2023-02-21 11:54:23,875 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=56.2 pTM=0.168 tol=0.322
2023-02-21 11:54:24,752 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=56.7 pTM=0.171 tol=0.269
2023-02-21 11:54:24,752 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:25,632 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=63.6 pTM=0.174
2023-02-21 11:54:26,509 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=63.4 pTM=0.18 tol=1.06
2023-02-21 11:54:27,385 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=64.7 pTM=0.186 tol=0.416
2023-02-21 11:54:28,262 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=64.6 pTM=0.185 tol=0.184
2023-02-21 11:54:28,262 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:29,140 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=60.2 pTM=0.154
2023-02-21 11:54:30,014 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=58.9 pTM=0.154 tol=0.66
2023-02-21 11:54:30,888 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=61.4 pTM=0.167 tol=0.286
2023-02-21 11:54:31,762 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=60.4 pTM=0.161 tol=0.113
2023-02-21 11:54:31,763 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:32,647 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=64.2 pTM=0.187
2023-02-21 11:54:33,523 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=62.6 pTM=0.175 tol=1.04
2023-02-21 11:54:34,399 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=63.7 pTM=0.178 tol=0.328
2023-02-21 11:54:35,276 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.176 tol=0.177
2023-02-21 11:54:35,276 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:35,279 reranking models by 'plddt' metric
2023-02-21 11:54:35,279 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=64.6 pTM=0.185
2023-02-21 11:54:35,279 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=63.4 pTM=0.176
2023-02-21 11:54:35,279 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=62 pTM=0.176
2023-02-21 11:54:35,279 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=60.4 pTM=0.161
2023-02-21 11:54:35,279 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=56.7 pTM=0.171
2023-02-21 11:54:36,043 Query 48/80: 2kvx (length 28)
2023-02-21 11:54:37,909 Padding length to 36
2023-02-21 11:54:38,798 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.8 pTM=0.412
2023-02-21 11:54:39,673 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.9 pTM=0.437 tol=0.253
2023-02-21 11:54:40,547 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=90 pTM=0.447 tol=0.0618
2023-02-21 11:54:41,422 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90.3 pTM=0.447 tol=0.0428
2023-02-21 11:54:41,422 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:42,302 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.8 pTM=0.424
2023-02-21 11:54:43,180 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.6 pTM=0.433 tol=0.294
2023-02-21 11:54:44,056 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=89.2 pTM=0.446 tol=0.0719
2023-02-21 11:54:44,933 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=89.6 pTM=0.449 tol=0.0252
2023-02-21 11:54:44,934 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:45,814 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.2 pTM=0.449
2023-02-21 11:54:46,691 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.1 pTM=0.467 tol=0.131
2023-02-21 11:54:47,567 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.6 pTM=0.471 tol=0.0492
2023-02-21 11:54:48,444 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.2 pTM=0.475 tol=0.0222
2023-02-21 11:54:48,444 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:49,323 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.5 pTM=0.426
2023-02-21 11:54:50,198 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.8 pTM=0.448 tol=0.223
2023-02-21 11:54:51,072 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.6 pTM=0.453 tol=0.0462
2023-02-21 11:54:51,947 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.6 pTM=0.455 tol=0.0159
2023-02-21 11:54:51,947 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:52,827 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=91.4 pTM=0.468
2023-02-21 11:54:53,704 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.3 pTM=0.466 tol=0.173
2023-02-21 11:54:54,581 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.9 pTM=0.472 tol=0.0399
2023-02-21 11:54:55,458 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=92.3 pTM=0.476 tol=0.0197
2023-02-21 11:54:55,458 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:54:55,461 reranking models by 'plddt' metric
2023-02-21 11:54:55,461 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=92.3 pTM=0.476
2023-02-21 11:54:55,461 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.2 pTM=0.475
2023-02-21 11:54:55,461 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.6 pTM=0.455
2023-02-21 11:54:55,461 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=90.3 pTM=0.447
2023-02-21 11:54:55,461 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=89.6 pTM=0.449
2023-02-21 11:54:56,115 Query 49/80: 7l53 (length 28)
2023-02-21 11:54:58,078 Padding length to 36
2023-02-21 11:54:58,969 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=58.2 pTM=0.177
2023-02-21 11:54:59,843 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.214 tol=1.33
2023-02-21 11:55:00,717 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.3 pTM=0.208 tol=0.297
2023-02-21 11:55:01,592 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.209 tol=0.117
2023-02-21 11:55:01,592 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:02,472 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=55.9 pTM=0.192
2023-02-21 11:55:03,349 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.204 tol=1.44
2023-02-21 11:55:04,225 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=58 pTM=0.191 tol=0.769
2023-02-21 11:55:05,102 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=61.1 pTM=0.216 tol=1.97
2023-02-21 11:55:05,102 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:05,982 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.239
2023-02-21 11:55:06,859 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=67.2 pTM=0.22 tol=1.21
2023-02-21 11:55:07,735 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=68.8 pTM=0.221 tol=0.278
2023-02-21 11:55:08,612 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=68.3 pTM=0.221 tol=0.146
2023-02-21 11:55:08,612 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:09,490 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.3 pTM=0.219
2023-02-21 11:55:10,364 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.198 tol=0.73
2023-02-21 11:55:11,238 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.202 tol=0.206
2023-02-21 11:55:12,113 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.207 tol=0.113
2023-02-21 11:55:12,113 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:12,994 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.6 pTM=0.23
2023-02-21 11:55:13,871 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.214 tol=1.01
2023-02-21 11:55:14,747 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.9 pTM=0.212 tol=0.354
2023-02-21 11:55:15,624 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.7 pTM=0.221 tol=0.136
2023-02-21 11:55:15,624 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:15,627 reranking models by 'plddt' metric
2023-02-21 11:55:15,627 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=68.7 pTM=0.221
2023-02-21 11:55:15,627 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=68.3 pTM=0.221
2023-02-21 11:55:15,627 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=64.9 pTM=0.209
2023-02-21 11:55:15,628 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=64.6 pTM=0.207
2023-02-21 11:55:15,628 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=61.1 pTM=0.216
2023-02-21 11:55:16,283 Query 50/80: 7l54 (length 28)
2023-02-21 11:55:18,102 Padding length to 36
2023-02-21 11:55:18,990 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=58.2 pTM=0.177
2023-02-21 11:55:19,865 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.214 tol=1.33
2023-02-21 11:55:20,739 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.3 pTM=0.208 tol=0.297
2023-02-21 11:55:21,613 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.209 tol=0.117
2023-02-21 11:55:21,613 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:22,494 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=55.9 pTM=0.192
2023-02-21 11:55:23,371 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.204 tol=1.44
2023-02-21 11:55:24,247 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=58 pTM=0.191 tol=0.769
2023-02-21 11:55:25,124 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=61.1 pTM=0.216 tol=1.97
2023-02-21 11:55:25,124 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:26,004 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.239
2023-02-21 11:55:26,880 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=67.2 pTM=0.22 tol=1.21
2023-02-21 11:55:27,756 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=68.8 pTM=0.221 tol=0.278
2023-02-21 11:55:28,633 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=68.3 pTM=0.221 tol=0.146
2023-02-21 11:55:28,633 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:29,511 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.3 pTM=0.219
2023-02-21 11:55:30,385 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.198 tol=0.73
2023-02-21 11:55:31,259 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.202 tol=0.206
2023-02-21 11:55:32,134 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.207 tol=0.113
2023-02-21 11:55:32,134 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:33,014 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.6 pTM=0.23
2023-02-21 11:55:33,891 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.214 tol=1.01
2023-02-21 11:55:34,767 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.9 pTM=0.212 tol=0.354
2023-02-21 11:55:35,643 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.7 pTM=0.221 tol=0.136
2023-02-21 11:55:35,643 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:35,646 reranking models by 'plddt' metric
2023-02-21 11:55:35,646 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=68.7 pTM=0.221
2023-02-21 11:55:35,647 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=68.3 pTM=0.221
2023-02-21 11:55:35,647 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=64.9 pTM=0.209
2023-02-21 11:55:35,647 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=64.6 pTM=0.207
2023-02-21 11:55:35,647 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=61.1 pTM=0.216
2023-02-21 11:55:36,431 Query 51/80: 7l55 (length 28)
2023-02-21 11:55:38,287 Padding length to 36
2023-02-21 11:55:39,176 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=58.2 pTM=0.177
2023-02-21 11:55:40,051 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.214 tol=1.33
2023-02-21 11:55:40,925 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=64.3 pTM=0.208 tol=0.297
2023-02-21 11:55:41,799 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.209 tol=0.117
2023-02-21 11:55:41,800 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:42,680 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=55.9 pTM=0.192
2023-02-21 11:55:43,557 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=60.3 pTM=0.204 tol=1.44
2023-02-21 11:55:44,433 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=58 pTM=0.191 tol=0.769
2023-02-21 11:55:45,310 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=61.1 pTM=0.216 tol=1.97
2023-02-21 11:55:45,310 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:46,190 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.239
2023-02-21 11:55:47,066 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=67.2 pTM=0.22 tol=1.21
2023-02-21 11:55:47,942 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=68.8 pTM=0.221 tol=0.278
2023-02-21 11:55:48,819 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=68.3 pTM=0.221 tol=0.146
2023-02-21 11:55:48,819 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:49,701 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.3 pTM=0.219
2023-02-21 11:55:50,576 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.198 tol=0.73
2023-02-21 11:55:51,451 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.202 tol=0.206
2023-02-21 11:55:52,325 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.207 tol=0.113
2023-02-21 11:55:52,325 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:53,205 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=68.6 pTM=0.23
2023-02-21 11:55:54,082 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.214 tol=1.01
2023-02-21 11:55:54,959 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.9 pTM=0.212 tol=0.354
2023-02-21 11:55:55,836 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=68.7 pTM=0.221 tol=0.136
2023-02-21 11:55:55,836 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:55:55,839 reranking models by 'plddt' metric
2023-02-21 11:55:55,839 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=68.7 pTM=0.221
2023-02-21 11:55:55,839 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=68.3 pTM=0.221
2023-02-21 11:55:55,839 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=64.9 pTM=0.209
2023-02-21 11:55:55,839 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=64.6 pTM=0.207
2023-02-21 11:55:55,839 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=61.1 pTM=0.216
2023-02-21 11:55:56,492 Query 52/80: 1znu (length 29)
2023-02-21 11:55:58,330 Padding length to 36
2023-02-21 11:55:59,214 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.2 pTM=0.432
2023-02-21 11:56:00,089 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.2 pTM=0.435 tol=0.405
2023-02-21 11:56:00,963 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.7 pTM=0.441 tol=0.118
2023-02-21 11:56:01,838 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.9 pTM=0.444 tol=0.0432
2023-02-21 11:56:01,838 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:02,718 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.6 pTM=0.442
2023-02-21 11:56:03,596 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.6 pTM=0.462 tol=0.985
2023-02-21 11:56:04,473 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.2 pTM=0.444 tol=0.216
2023-02-21 11:56:05,350 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.2 pTM=0.444 tol=0.0437
2023-02-21 11:56:05,350 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:06,230 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87 pTM=0.474
2023-02-21 11:56:07,108 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.1 pTM=0.513 tol=0.93
2023-02-21 11:56:07,985 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.8 pTM=0.517 tol=0.158
2023-02-21 11:56:08,862 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92 pTM=0.516 tol=0.0336
2023-02-21 11:56:08,862 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:09,740 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.4 pTM=0.425
2023-02-21 11:56:10,615 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.2 pTM=0.475 tol=1.09
2023-02-21 11:56:11,489 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=89.3 pTM=0.469 tol=0.124
2023-02-21 11:56:12,363 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=89.4 pTM=0.47 tol=0.0412
2023-02-21 11:56:12,364 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:13,244 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.2 pTM=0.453
2023-02-21 11:56:14,121 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.6 pTM=0.484 tol=1.04
2023-02-21 11:56:14,997 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.5 pTM=0.474 tol=0.109
2023-02-21 11:56:15,874 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.2 pTM=0.471 tol=0.0497
2023-02-21 11:56:15,875 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:15,878 reranking models by 'plddt' metric
2023-02-21 11:56:15,878 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92 pTM=0.516
2023-02-21 11:56:15,878 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=89.4 pTM=0.47
2023-02-21 11:56:15,878 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.2 pTM=0.471
2023-02-21 11:56:15,878 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=86.9 pTM=0.444
2023-02-21 11:56:15,878 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=86.2 pTM=0.444
2023-02-21 11:56:16,699 Query 53/80: 2k7g (length 29)
2023-02-21 11:56:18,539 Padding length to 36
2023-02-21 11:56:19,430 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.7 pTM=0.408
2023-02-21 11:56:20,305 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.2 pTM=0.438 tol=0.88
2023-02-21 11:56:21,178 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.6 pTM=0.446 tol=0.0954
2023-02-21 11:56:22,053 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.8 pTM=0.445 tol=0.0381
2023-02-21 11:56:22,053 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:22,934 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.1 pTM=0.444
2023-02-21 11:56:23,811 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.8 pTM=0.464 tol=0.447
2023-02-21 11:56:24,687 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.8 pTM=0.457 tol=0.22
2023-02-21 11:56:25,564 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.2 pTM=0.459 tol=0.0908
2023-02-21 11:56:25,564 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:26,447 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.1 pTM=0.504
2023-02-21 11:56:27,324 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92 pTM=0.508 tol=0.206
2023-02-21 11:56:28,200 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.4 pTM=0.51 tol=0.0954
2023-02-21 11:56:29,078 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.512 tol=0.0278
2023-02-21 11:56:29,078 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:30,082 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.8 pTM=0.458
2023-02-21 11:56:30,958 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.1 pTM=0.471 tol=0.234
2023-02-21 11:56:31,832 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.472 tol=0.029
2023-02-21 11:56:32,707 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.4 pTM=0.473 tol=0.0229
2023-02-21 11:56:32,707 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 11:56:33,587 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.9 pTM=0.498
2023-02-21 11:56:34,464 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.4 pTM=0.502 tol=0.141
2023-02-21 11:56:35,341 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.4 pTM=0.507 tol=0.041
2023-02-21 11:56:36,218 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.6 pTM=0.508 tol=0.042
2023-02-21 11:56:36,218 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:36,221 reranking models by 'plddt' metric
2023-02-21 11:56:36,221 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.512
2023-02-21 11:56:36,221 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.6 pTM=0.508
2023-02-21 11:56:36,221 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.4 pTM=0.473
2023-02-21 11:56:36,221 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=87.2 pTM=0.459
2023-02-21 11:56:36,221 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.8 pTM=0.445
2023-02-21 11:56:36,872 Query 54/80: 2kch (length 29)
2023-02-21 11:56:38,879 Padding length to 36
2023-02-21 11:56:39,767 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.2 pTM=0.42
2023-02-21 11:56:40,641 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=84.2 pTM=0.431 tol=0.94
2023-02-21 11:56:41,516 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.9 pTM=0.444 tol=0.576
2023-02-21 11:56:42,390 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.4 pTM=0.445 tol=0.0647
2023-02-21 11:56:42,390 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:43,270 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.4 pTM=0.437
2023-02-21 11:56:44,147 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.2 pTM=0.44 tol=0.312
2023-02-21 11:56:45,024 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85 pTM=0.439 tol=0.155
2023-02-21 11:56:45,901 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.6 pTM=0.438 tol=0.133
2023-02-21 11:56:45,901 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:46,782 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88.4 pTM=0.492
2023-02-21 11:56:47,659 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.2 pTM=0.512 tol=0.329
2023-02-21 11:56:48,535 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.7 pTM=0.512 tol=0.0771
2023-02-21 11:56:49,412 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.8 pTM=0.509 tol=0.0206
2023-02-21 11:56:49,413 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:50,291 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.6 pTM=0.455
2023-02-21 11:56:51,166 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88 pTM=0.457 tol=0.232
2023-02-21 11:56:52,040 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=88.2 pTM=0.461 tol=0.104
2023-02-21 11:56:52,914 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=88.2 pTM=0.462 tol=0.0237
2023-02-21 11:56:52,915 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:53,795 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.6 pTM=0.463
2023-02-21 11:56:54,672 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.1 pTM=0.455 tol=0.863
2023-02-21 11:56:55,548 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.3 pTM=0.471 tol=0.295
2023-02-21 11:56:56,425 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.9 pTM=0.475 tol=0.0416
2023-02-21 11:56:56,425 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:56:56,428 reranking models by 'plddt' metric
2023-02-21 11:56:56,428 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.8 pTM=0.509
2023-02-21 11:56:56,428 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=89.9 pTM=0.475
2023-02-21 11:56:56,428 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=88.2 pTM=0.462
2023-02-21 11:56:56,429 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=86.4 pTM=0.445
2023-02-21 11:56:56,429 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=84.6 pTM=0.438
2023-02-21 11:56:57,086 Query 55/80: 2lam (length 29)
2023-02-21 11:56:58,926 Padding length to 36
2023-02-21 11:56:59,818 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=80.2 pTM=0.379
2023-02-21 11:57:00,695 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=84.5 pTM=0.424 tol=0.511
2023-02-21 11:57:01,570 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.3 pTM=0.43 tol=0.176
2023-02-21 11:57:02,445 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86 pTM=0.434 tol=0.105
2023-02-21 11:57:02,445 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:03,329 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=84 pTM=0.417
2023-02-21 11:57:04,206 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.2 pTM=0.443 tol=0.953
2023-02-21 11:57:05,083 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.9 pTM=0.448 tol=0.219
2023-02-21 11:57:05,960 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88 pTM=0.453 tol=0.126
2023-02-21 11:57:05,960 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:06,840 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.2 pTM=0.504
2023-02-21 11:57:07,718 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.8 pTM=0.503 tol=0.614
2023-02-21 11:57:08,594 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.9 pTM=0.513 tol=0.114
2023-02-21 11:57:09,472 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=93.6 pTM=0.52 tol=0.0406
2023-02-21 11:57:09,472 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:10,350 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.6 pTM=0.453
2023-02-21 11:57:11,225 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.6 pTM=0.463 tol=0.208
2023-02-21 11:57:12,099 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.469 tol=0.132
2023-02-21 11:57:12,974 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.8 pTM=0.473 tol=0.0545
2023-02-21 11:57:12,974 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:13,859 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.8 pTM=0.492
2023-02-21 11:57:14,736 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.5 pTM=0.482 tol=0.276
2023-02-21 11:57:15,613 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.9 pTM=0.49 tol=0.125
2023-02-21 11:57:16,490 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.6 pTM=0.494 tol=0.0844
2023-02-21 11:57:16,490 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:16,493 reranking models by 'plddt' metric
2023-02-21 11:57:16,493 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=93.6 pTM=0.52
2023-02-21 11:57:16,493 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.8 pTM=0.473
2023-02-21 11:57:16,494 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=90.6 pTM=0.494
2023-02-21 11:57:16,494 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88 pTM=0.453
2023-02-21 11:57:16,494 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86 pTM=0.434
2023-02-21 11:57:17,309 Query 56/80: 2lur (length 29)
2023-02-21 11:57:19,168 Padding length to 36
2023-02-21 11:57:20,064 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=78.7 pTM=0.336
2023-02-21 11:57:20,939 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.4 pTM=0.365 tol=0.749
2023-02-21 11:57:21,813 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=82.8 pTM=0.385 tol=0.366
2023-02-21 11:57:22,687 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=83.2 pTM=0.389 tol=0.152
2023-02-21 11:57:22,687 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:23,567 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.6 pTM=0.384
2023-02-21 11:57:24,444 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=83.1 pTM=0.398 tol=1.8
2023-02-21 11:57:25,320 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.4 pTM=0.401 tol=0.266
2023-02-21 11:57:26,197 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=83.6 pTM=0.402 tol=0.0657
2023-02-21 11:57:26,197 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:27,077 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=83.8 pTM=0.398
2023-02-21 11:57:27,954 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.1 pTM=0.432 tol=1.13
2023-02-21 11:57:28,830 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=86.6 pTM=0.433 tol=0.274
2023-02-21 11:57:29,707 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=86.8 pTM=0.436 tol=0.111
2023-02-21 11:57:29,707 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:30,585 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=84.4 pTM=0.398
2023-02-21 11:57:31,464 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.9 pTM=0.403 tol=1.38
2023-02-21 11:57:32,343 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.1 pTM=0.406 tol=0.172
2023-02-21 11:57:33,223 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.9 pTM=0.407 tol=0.0734
2023-02-21 11:57:33,223 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:34,108 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=84.9 pTM=0.425
2023-02-21 11:57:34,989 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.2 pTM=0.435 tol=0.772
2023-02-21 11:57:35,870 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=86.4 pTM=0.439 tol=0.12
2023-02-21 11:57:36,752 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.4 pTM=0.44 tol=0.15
2023-02-21 11:57:36,752 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:36,760 reranking models by 'plddt' metric
2023-02-21 11:57:36,760 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=86.8 pTM=0.436
2023-02-21 11:57:36,760 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=86.4 pTM=0.44
2023-02-21 11:57:36,760 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=84.9 pTM=0.407
2023-02-21 11:57:36,760 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=83.6 pTM=0.402
2023-02-21 11:57:36,760 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=83.2 pTM=0.389
2023-02-21 11:57:37,415 Query 57/80: 2m9o (length 29)
2023-02-21 11:57:39,253 Padding length to 36
2023-02-21 11:57:40,141 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.7 pTM=0.406
2023-02-21 11:57:41,015 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.4 pTM=0.437 tol=0.985
2023-02-21 11:57:41,889 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.1 pTM=0.435 tol=0.152
2023-02-21 11:57:42,764 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=85.6 pTM=0.437 tol=0.0827
2023-02-21 11:57:42,764 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:43,650 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.8 pTM=0.413
2023-02-21 11:57:44,532 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.9 pTM=0.44 tol=1.15
2023-02-21 11:57:45,413 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.4 pTM=0.442 tol=0.0466
2023-02-21 11:57:46,294 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.6 pTM=0.444 tol=0.021
2023-02-21 11:57:46,295 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:47,179 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90.9 pTM=0.494
2023-02-21 11:57:48,061 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.8 pTM=0.5 tol=0.119
2023-02-21 11:57:48,942 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.1 pTM=0.501 tol=0.0443
2023-02-21 11:57:49,824 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.2 pTM=0.501 tol=0.03
2023-02-21 11:57:49,824 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:50,707 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.2 pTM=0.447
2023-02-21 11:57:51,586 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=88.1 pTM=0.451 tol=0.4
2023-02-21 11:57:52,465 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=88.1 pTM=0.449 tol=0.0662
2023-02-21 11:57:53,345 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=88.3 pTM=0.451 tol=0.0212
2023-02-21 11:57:53,345 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:54,230 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.496
2023-02-21 11:57:55,112 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.1 pTM=0.49 tol=0.181
2023-02-21 11:57:55,993 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.6 pTM=0.494 tol=0.0533
2023-02-21 11:57:56,875 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.8 pTM=0.496 tol=0.0211
2023-02-21 11:57:56,875 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:57:56,878 reranking models by 'plddt' metric
2023-02-21 11:57:56,878 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.2 pTM=0.501
2023-02-21 11:57:56,878 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=90.8 pTM=0.496
2023-02-21 11:57:56,879 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=88.3 pTM=0.451
2023-02-21 11:57:56,879 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.6 pTM=0.444
2023-02-21 11:57:56,879 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=85.6 pTM=0.437
2023-02-21 11:57:57,676 Query 58/80: 2mw0 (length 29)
2023-02-21 11:57:59,524 Padding length to 36
2023-02-21 11:58:00,424 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.5 pTM=0.283
2023-02-21 11:58:01,298 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=89.5 pTM=0.417 tol=1.06
2023-02-21 11:58:02,172 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.1 pTM=0.422 tol=0.095
2023-02-21 11:58:03,052 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=89.4 pTM=0.425 tol=0.0596
2023-02-21 11:58:03,052 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:03,937 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.6 pTM=0.364
2023-02-21 11:58:04,819 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.1 pTM=0.404 tol=0.529
2023-02-21 11:58:05,700 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.6 pTM=0.399 tol=0.338
2023-02-21 11:58:06,582 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.6 pTM=0.413 tol=0.196
2023-02-21 11:58:06,582 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:07,467 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=81.4 pTM=0.349
2023-02-21 11:58:08,349 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91 pTM=0.484 tol=1.23
2023-02-21 11:58:09,230 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.1 pTM=0.486 tol=0.575
2023-02-21 11:58:10,111 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.2 pTM=0.487 tol=0.508
2023-02-21 11:58:10,112 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:10,994 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=83.2 pTM=0.368
2023-02-21 11:58:11,874 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.8 pTM=0.369 tol=0.515
2023-02-21 11:58:12,753 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85 pTM=0.37 tol=0.251
2023-02-21 11:58:13,633 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=85.5 pTM=0.375 tol=0.0856
2023-02-21 11:58:13,633 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:14,518 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.434
2023-02-21 11:58:15,400 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.8 pTM=0.47 tol=0.319
2023-02-21 11:58:16,281 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=92.9 pTM=0.492 tol=0.304
2023-02-21 11:58:17,163 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=93.9 pTM=0.505 tol=0.146
2023-02-21 11:58:17,163 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:17,166 reranking models by 'plddt' metric
2023-02-21 11:58:17,166 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=93.9 pTM=0.505
2023-02-21 11:58:17,166 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=92.2 pTM=0.487
2023-02-21 11:58:17,166 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=89.4 pTM=0.425
2023-02-21 11:58:17,167 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=87.6 pTM=0.413
2023-02-21 11:58:17,167 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=85.5 pTM=0.375
2023-02-21 11:58:17,826 Query 59/80: 7k7x (length 29)
2023-02-21 11:58:19,796 Padding length to 36
2023-02-21 11:58:20,687 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85 pTM=0.426
2023-02-21 11:58:21,563 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.1 pTM=0.456 tol=0.987
2023-02-21 11:58:22,442 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.6 pTM=0.45 tol=0.114
2023-02-21 11:58:23,322 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.6 pTM=0.453 tol=0.146
2023-02-21 11:58:23,322 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:24,207 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.9 pTM=0.453
2023-02-21 11:58:25,089 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.6 pTM=0.468 tol=0.267
2023-02-21 11:58:25,970 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.8 pTM=0.468 tol=0.102
2023-02-21 11:58:26,852 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.1 pTM=0.47 tol=0.0524
2023-02-21 11:58:26,852 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:27,737 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=89.4 pTM=0.496
2023-02-21 11:58:28,619 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.8 pTM=0.514 tol=0.518
2023-02-21 11:58:29,500 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.3 pTM=0.517 tol=0.095
2023-02-21 11:58:30,382 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.517 tol=0.0391
2023-02-21 11:58:30,382 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:31,265 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=87.6 pTM=0.449
2023-02-21 11:58:32,145 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.4 pTM=0.472 tol=0.371
2023-02-21 11:58:33,024 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=89.8 pTM=0.472 tol=0.09
2023-02-21 11:58:33,904 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=89.9 pTM=0.473 tol=0.034
2023-02-21 11:58:33,904 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:34,789 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.6 pTM=0.493
2023-02-21 11:58:35,671 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.8 pTM=0.499 tol=0.462
2023-02-21 11:58:36,552 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.2 pTM=0.497 tol=0.052
2023-02-21 11:58:37,434 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.8 pTM=0.498 tol=0.0473
2023-02-21 11:58:37,434 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:37,437 reranking models by 'plddt' metric
2023-02-21 11:58:37,437 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.517
2023-02-21 11:58:37,438 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=90.8 pTM=0.498
2023-02-21 11:58:37,438 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=89.9 pTM=0.473
2023-02-21 11:58:37,438 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88.1 pTM=0.47
2023-02-21 11:58:37,438 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.6 pTM=0.453
2023-02-21 11:58:38,096 Query 60/80: 7lhc (length 29)
2023-02-21 11:58:39,958 Padding length to 36
2023-02-21 11:58:40,853 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=83.6 pTM=0.415
2023-02-21 11:58:41,729 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.4 pTM=0.454 tol=0.97
2023-02-21 11:58:42,609 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.5 pTM=0.451 tol=0.119
2023-02-21 11:58:43,488 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.6 pTM=0.453 tol=0.0925
2023-02-21 11:58:43,488 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:44,373 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.8 pTM=0.45
2023-02-21 11:58:45,255 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.1 pTM=0.463 tol=0.237
2023-02-21 11:58:46,136 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.2 pTM=0.462 tol=0.0491
2023-02-21 11:58:47,018 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.5 pTM=0.465 tol=0.0295
2023-02-21 11:58:47,018 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:47,904 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90.1 pTM=0.504
2023-02-21 11:58:48,785 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.4 pTM=0.519 tol=0.478
2023-02-21 11:58:49,666 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.4 pTM=0.516 tol=0.0569
2023-02-21 11:58:50,548 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.6 pTM=0.516 tol=0.038
2023-02-21 11:58:50,548 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:51,431 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=88.2 pTM=0.456
2023-02-21 11:58:52,311 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.8 pTM=0.479 tol=0.407
2023-02-21 11:58:53,190 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.482 tol=0.0855
2023-02-21 11:58:54,070 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.5 pTM=0.482 tol=0.0234
2023-02-21 11:58:54,070 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:54,955 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.3 pTM=0.49
2023-02-21 11:58:55,837 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.7 pTM=0.49 tol=0.313
2023-02-21 11:58:56,718 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.4 pTM=0.494 tol=0.042
2023-02-21 11:58:57,600 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.6 pTM=0.495 tol=0.0215
2023-02-21 11:58:57,600 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:58:57,603 reranking models by 'plddt' metric
2023-02-21 11:58:57,604 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.6 pTM=0.516
2023-02-21 11:58:57,604 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=90.6 pTM=0.495
2023-02-21 11:58:57,604 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=90.5 pTM=0.482
2023-02-21 11:58:57,604 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=87.5 pTM=0.465
2023-02-21 11:58:57,604 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=86.6 pTM=0.453
2023-02-21 11:58:58,400 Query 61/80: 1bh4 (length 30)
2023-02-21 11:59:00,283 Padding length to 36
2023-02-21 11:59:01,166 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=90.9 pTM=0.481
2023-02-21 11:59:02,046 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.6 pTM=0.454 tol=0.177
2023-02-21 11:59:02,924 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.6 pTM=0.452 tol=0.0522
2023-02-21 11:59:03,804 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.1 pTM=0.449 tol=0.0179
2023-02-21 11:59:03,804 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:04,689 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=91.6 pTM=0.493
2023-02-21 11:59:05,571 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.2 pTM=0.468 tol=0.14
2023-02-21 11:59:06,452 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.1 pTM=0.464 tol=0.0547
2023-02-21 11:59:07,334 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=90.4 pTM=0.467 tol=0.0398
2023-02-21 11:59:07,334 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:08,219 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=88.6 pTM=0.479
2023-02-21 11:59:09,101 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.1 pTM=0.469 tol=0.483
2023-02-21 11:59:09,986 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=88.2 pTM=0.462 tol=0.269
2023-02-21 11:59:10,868 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.7 pTM=0.464 tol=0.37
2023-02-21 11:59:10,868 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:11,751 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=91.2 pTM=0.481
2023-02-21 11:59:12,632 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.1 pTM=0.482 tol=0.132
2023-02-21 11:59:13,511 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.1 pTM=0.478 tol=0.0347
2023-02-21 11:59:14,391 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91 pTM=0.477 tol=0.0123
2023-02-21 11:59:14,391 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:15,276 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.1 pTM=0.473
2023-02-21 11:59:16,158 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.1 pTM=0.445 tol=0.148
2023-02-21 11:59:17,039 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.4 pTM=0.437 tol=0.0332
2023-02-21 11:59:17,920 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88.4 pTM=0.439 tol=0.0151
2023-02-21 11:59:17,920 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:17,928 reranking models by 'plddt' metric
2023-02-21 11:59:17,928 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=91 pTM=0.477
2023-02-21 11:59:17,928 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=90.4 pTM=0.467
2023-02-21 11:59:17,928 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=88.7 pTM=0.464
2023-02-21 11:59:17,928 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=88.4 pTM=0.439
2023-02-21 11:59:17,928 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.1 pTM=0.449
2023-02-21 11:59:18,600 Query 62/80: 1df6 (length 30)
2023-02-21 11:59:20,427 Padding length to 36
2023-02-21 11:59:21,319 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=61 pTM=0.205
2023-02-21 11:59:22,198 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=60.4 pTM=0.205 tol=0.709
2023-02-21 11:59:23,080 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=59.9 pTM=0.198 tol=0.385
2023-02-21 11:59:23,959 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=60 pTM=0.199 tol=0.0966
2023-02-21 11:59:23,959 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:24,850 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=61.8 pTM=0.233
2023-02-21 11:59:25,731 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=58.6 pTM=0.194 tol=1.68
2023-02-21 11:59:26,613 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=59.5 pTM=0.195 tol=0.678
2023-02-21 11:59:27,494 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=59.4 pTM=0.193 tol=0.475
2023-02-21 11:59:27,494 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:28,379 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=63.1 pTM=0.225
2023-02-21 11:59:29,260 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=68.9 pTM=0.238 tol=1.51
2023-02-21 11:59:30,141 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=69.7 pTM=0.25 tol=1.47
2023-02-21 11:59:31,022 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=68.9 pTM=0.26 tol=0.763
2023-02-21 11:59:31,022 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:31,905 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=61.3 pTM=0.193
2023-02-21 11:59:32,784 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=61.1 pTM=0.203 tol=2.08
2023-02-21 11:59:33,663 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=64 pTM=0.214 tol=1.97
2023-02-21 11:59:34,542 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=60.8 pTM=0.206 tol=1.51
2023-02-21 11:59:34,542 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:35,427 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=63.9 pTM=0.244
2023-02-21 11:59:36,308 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=65.3 pTM=0.252 tol=2.32
2023-02-21 11:59:37,189 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=65.3 pTM=0.257 tol=0.528
2023-02-21 11:59:38,071 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=65.8 pTM=0.259 tol=0.51
2023-02-21 11:59:38,071 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:38,074 reranking models by 'plddt' metric
2023-02-21 11:59:38,074 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=68.9 pTM=0.26
2023-02-21 11:59:38,074 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=65.8 pTM=0.259
2023-02-21 11:59:38,074 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=60.8 pTM=0.206
2023-02-21 11:59:38,074 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=60 pTM=0.199
2023-02-21 11:59:38,074 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=59.4 pTM=0.193
2023-02-21 11:59:38,891 Query 63/80: 1vb8 (length 30)
2023-02-21 11:59:40,704 Padding length to 36
2023-02-21 11:59:41,605 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=76.6 pTM=0.337
2023-02-21 11:59:42,484 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.1 pTM=0.382 tol=0.429
2023-02-21 11:59:43,362 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=81.6 pTM=0.395 tol=0.318
2023-02-21 11:59:44,241 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.2 pTM=0.401 tol=0.121
2023-02-21 11:59:44,242 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:45,127 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=79 pTM=0.356
2023-02-21 11:59:46,009 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.8 pTM=0.405 tol=0.235
2023-02-21 11:59:46,890 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83 pTM=0.405 tol=0.183
2023-02-21 11:59:47,771 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=83.1 pTM=0.406 tol=0.0771
2023-02-21 11:59:47,772 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:48,657 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=85.2 pTM=0.426
2023-02-21 11:59:49,538 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.6 pTM=0.449 tol=0.325
2023-02-21 11:59:50,419 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=87.4 pTM=0.459 tol=0.29
2023-02-21 11:59:51,300 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=87.9 pTM=0.463 tol=0.18
2023-02-21 11:59:51,300 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:52,183 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=82.8 pTM=0.391
2023-02-21 11:59:53,063 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85.4 pTM=0.423 tol=0.207
2023-02-21 11:59:53,942 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.6 pTM=0.424 tol=0.0724
2023-02-21 11:59:54,822 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=85.8 pTM=0.424 tol=0.0319
2023-02-21 11:59:54,822 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:55,711 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=82.5 pTM=0.41
2023-02-21 11:59:56,593 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84.1 pTM=0.434 tol=0.212
2023-02-21 11:59:57,474 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=85.8 pTM=0.443 tol=0.0938
2023-02-21 11:59:58,356 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=86.4 pTM=0.449 tol=0.03
2023-02-21 11:59:58,356 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 11:59:58,359 reranking models by 'plddt' metric
2023-02-21 11:59:58,360 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=87.9 pTM=0.463
2023-02-21 11:59:58,360 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=86.4 pTM=0.449
2023-02-21 11:59:58,360 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=85.8 pTM=0.424
2023-02-21 11:59:58,360 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=83.1 pTM=0.406
2023-02-21 11:59:58,360 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=82.2 pTM=0.401
2023-02-21 11:59:59,028 Query 64/80: 2knm (length 30)
2023-02-21 12:00:01,027 Padding length to 36
2023-02-21 12:00:01,919 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=87.6 pTM=0.446
2023-02-21 12:00:02,798 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.9 pTM=0.453 tol=0.156
2023-02-21 12:00:03,677 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.6 pTM=0.449 tol=0.0387
2023-02-21 12:00:04,556 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.5 pTM=0.448 tol=0.0127
2023-02-21 12:00:04,556 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:05,442 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=88.4 pTM=0.451
2023-02-21 12:00:06,323 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.7 pTM=0.453 tol=0.13
2023-02-21 12:00:07,205 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.7 pTM=0.451 tol=0.0221
2023-02-21 12:00:08,087 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.8 pTM=0.452 tol=0.00732
2023-02-21 12:00:08,087 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:08,972 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.494
2023-02-21 12:00:09,858 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.1 pTM=0.498 tol=0.162
2023-02-21 12:00:10,739 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.2 pTM=0.495 tol=0.0351
2023-02-21 12:00:11,620 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.1 pTM=0.495 tol=0.0157
2023-02-21 12:00:11,621 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:12,504 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.8 pTM=0.461
2023-02-21 12:00:13,383 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.1 pTM=0.466 tol=0.17
2023-02-21 12:00:14,266 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.4 pTM=0.466 tol=0.0548
2023-02-21 12:00:15,146 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.5 pTM=0.465 tol=0.0182
2023-02-21 12:00:15,146 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:16,031 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=88.9 pTM=0.46
2023-02-21 12:00:16,913 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.2 pTM=0.462 tol=0.0904
2023-02-21 12:00:17,795 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.6 pTM=0.464 tol=0.0446
2023-02-21 12:00:18,679 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.6 pTM=0.464 tol=0.011
2023-02-21 12:00:18,679 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:18,682 reranking models by 'plddt' metric
2023-02-21 12:00:18,682 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.1 pTM=0.495
2023-02-21 12:00:18,682 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.5 pTM=0.465
2023-02-21 12:00:18,682 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.6 pTM=0.464
2023-02-21 12:00:18,682 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=88.8 pTM=0.452
2023-02-21 12:00:18,682 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=88.5 pTM=0.448
2023-02-21 12:00:19,357 Query 65/80: 2kuk (length 30)
2023-02-21 12:00:21,194 Padding length to 36
2023-02-21 12:00:22,087 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=84.1 pTM=0.424
2023-02-21 12:00:22,966 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=86.4 pTM=0.449 tol=0.327
2023-02-21 12:00:23,845 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=86.5 pTM=0.448 tol=0.0897
2023-02-21 12:00:24,724 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=86.8 pTM=0.45 tol=0.0351
2023-02-21 12:00:24,724 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:25,610 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=82.8 pTM=0.421
2023-02-21 12:00:26,492 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.9 pTM=0.446 tol=1.16
2023-02-21 12:00:27,373 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.6 pTM=0.45 tol=0.199
2023-02-21 12:00:28,255 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85.8 pTM=0.45 tol=0.044
2023-02-21 12:00:28,256 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:29,140 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=84.9 pTM=0.45
2023-02-21 12:00:30,022 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.6 pTM=0.484 tol=0.494
2023-02-21 12:00:30,907 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=89.6 pTM=0.491 tol=0.127
2023-02-21 12:00:31,789 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89.7 pTM=0.494 tol=0.0385
2023-02-21 12:00:31,789 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:32,672 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.9 pTM=0.437
2023-02-21 12:00:33,552 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=87.7 pTM=0.462 tol=1.05
2023-02-21 12:00:34,431 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=87.2 pTM=0.459 tol=0.109
2023-02-21 12:00:35,311 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=87.5 pTM=0.459 tol=0.0413
2023-02-21 12:00:35,311 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:36,196 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.1 pTM=0.465
2023-02-21 12:00:37,078 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.9 pTM=0.476 tol=0.543
2023-02-21 12:00:37,960 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=88.5 pTM=0.481 tol=0.064
2023-02-21 12:00:38,841 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88.8 pTM=0.486 tol=0.0271
2023-02-21 12:00:38,841 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:00:38,845 reranking models by 'plddt' metric
2023-02-21 12:00:38,845 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=89.7 pTM=0.494
2023-02-21 12:00:38,845 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=88.8 pTM=0.486
2023-02-21 12:00:38,845 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=87.5 pTM=0.459
2023-02-21 12:00:38,845 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=86.8 pTM=0.45
2023-02-21 12:00:38,845 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=85.8 pTM=0.45
2023-02-21 12:00:39,663 Query 66/80: 2kux (length 30)
2023-02-21 12:00:40,265 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:00:49,875 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:01:00,484 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:01:08,096 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:01:15,709 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:01:22,307 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:01:33,170 Padding length to 36
2023-02-21 12:01:34,071 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=89.2 pTM=0.463
2023-02-21 12:01:34,946 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=90.1 pTM=0.472 tol=0.164
2023-02-21 12:01:35,822 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.47 tol=0.0424
2023-02-21 12:01:36,701 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=90 pTM=0.47 tol=0.0184
2023-02-21 12:01:36,701 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:01:37,587 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=90.2 pTM=0.481
2023-02-21 12:01:38,468 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=90.8 pTM=0.486 tol=0.12
2023-02-21 12:01:39,350 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=90.9 pTM=0.482 tol=0.0229
2023-02-21 12:01:40,236 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=91 pTM=0.484 tol=0.00838
2023-02-21 12:01:40,236 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:01:41,121 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.9 pTM=0.498
2023-02-21 12:01:42,003 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.3 pTM=0.498 tol=0.126
2023-02-21 12:01:42,884 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.2 pTM=0.495 tol=0.0322
2023-02-21 12:01:43,766 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.4 pTM=0.495 tol=0.0219
2023-02-21 12:01:43,766 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:01:44,649 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.9 pTM=0.467
2023-02-21 12:01:45,528 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.8 pTM=0.478 tol=0.138
2023-02-21 12:01:46,407 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.1 pTM=0.478 tol=0.048
2023-02-21 12:01:47,287 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.2 pTM=0.478 tol=0.0151
2023-02-21 12:01:47,287 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:01:48,172 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.9 pTM=0.487
2023-02-21 12:01:49,054 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=91.5 pTM=0.489 tol=0.0961
2023-02-21 12:01:49,935 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.8 pTM=0.491 tol=0.0831
2023-02-21 12:01:50,817 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.8 pTM=0.491 tol=0.0433
2023-02-21 12:01:50,817 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:01:50,821 reranking models by 'plddt' metric
2023-02-21 12:01:50,821 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.4 pTM=0.495
2023-02-21 12:01:50,821 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=91.8 pTM=0.491
2023-02-21 12:01:50,821 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=91.2 pTM=0.478
2023-02-21 12:01:50,821 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=91 pTM=0.484
2023-02-21 12:01:50,821 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=90 pTM=0.47
2023-02-21 12:01:51,504 Query 67/80: 2mn1 (length 30)
2023-02-21 12:01:52,096 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:02:01,690 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:02:11,303 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:02:16,921 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:02:24,528 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:02:30,132 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:02:35,742 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:02:42,744 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:02:52,364 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:03:04,213 Padding length to 36
2023-02-21 12:03:05,131 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.4 pTM=0.438
2023-02-21 12:03:06,006 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85 pTM=0.449 tol=0.943
2023-02-21 12:03:06,880 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.8 pTM=0.442 tol=0.122
2023-02-21 12:03:07,756 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=84.2 pTM=0.441 tol=0.227
2023-02-21 12:03:07,756 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:03:08,641 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.4 pTM=0.458
2023-02-21 12:03:09,523 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=86.1 pTM=0.473 tol=0.863
2023-02-21 12:03:10,404 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.6 pTM=0.468 tol=0.256
2023-02-21 12:03:11,286 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.1 pTM=0.47 tol=0.0368
2023-02-21 12:03:11,286 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:03:12,172 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=90.4 pTM=0.523
2023-02-21 12:03:13,054 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=90.4 pTM=0.522 tol=0.273
2023-02-21 12:03:13,935 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.2 pTM=0.524 tol=0.109
2023-02-21 12:03:14,817 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.3 pTM=0.524 tol=0.0595
2023-02-21 12:03:14,817 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:03:15,700 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.6 pTM=0.486
2023-02-21 12:03:16,580 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=90.6 pTM=0.504 tol=0.244
2023-02-21 12:03:17,459 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.7 pTM=0.502 tol=0.0866
2023-02-21 12:03:18,339 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.7 pTM=0.502 tol=0.0501
2023-02-21 12:03:18,339 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:03:19,225 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.2 pTM=0.523
2023-02-21 12:03:20,107 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.2 pTM=0.521 tol=0.213
2023-02-21 12:03:20,989 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=90.9 pTM=0.525 tol=0.107
2023-02-21 12:03:21,871 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=90.6 pTM=0.525 tol=0.0399
2023-02-21 12:03:21,871 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:03:21,874 reranking models by 'plddt' metric
2023-02-21 12:03:21,874 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.3 pTM=0.524
2023-02-21 12:03:21,874 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.7 pTM=0.502
2023-02-21 12:03:21,874 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=90.6 pTM=0.525
2023-02-21 12:03:21,874 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.1 pTM=0.47
2023-02-21 12:03:21,874 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=84.2 pTM=0.441
2023-02-21 12:03:22,705 Query 68/80: 2mso (length 30)
2023-02-21 12:03:23,296 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:03:29,892 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:03:38,502 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:03:49,112 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:03:57,736 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:04:05,347 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:04:12,942 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:04:21,557 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:04:29,396 Padding length to 36
2023-02-21 12:04:30,313 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=62.1 pTM=0.228
2023-02-21 12:04:31,188 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=60.5 pTM=0.223 tol=1.71
2023-02-21 12:04:32,061 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=62.8 pTM=0.235 tol=0.694
2023-02-21 12:04:32,936 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=62 pTM=0.229 tol=0.334
2023-02-21 12:04:32,936 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:04:33,821 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=60.4 pTM=0.22
2023-02-21 12:04:34,703 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=57.8 pTM=0.213 tol=1.89
2023-02-21 12:04:35,583 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=58.1 pTM=0.221 tol=0.264
2023-02-21 12:04:36,465 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=58.7 pTM=0.219 tol=0.282
2023-02-21 12:04:36,465 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:04:37,350 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=79.5 pTM=0.332
2023-02-21 12:04:38,231 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.7 pTM=0.395 tol=2.07
2023-02-21 12:04:39,112 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.9 pTM=0.396 tol=0.593
2023-02-21 12:04:39,993 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=83.3 pTM=0.4 tol=0.168
2023-02-21 12:04:39,993 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:04:40,880 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=76.4 pTM=0.322
2023-02-21 12:04:41,759 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=78 pTM=0.349 tol=1.51
2023-02-21 12:04:42,638 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=76.4 pTM=0.337 tol=0.779
2023-02-21 12:04:43,517 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=77.4 pTM=0.34 tol=0.107
2023-02-21 12:04:43,517 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:04:44,402 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=60.4 pTM=0.21
2023-02-21 12:04:45,283 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=59.4 pTM=0.196 tol=0.514
2023-02-21 12:04:46,165 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=63.2 pTM=0.22 tol=0.806
2023-02-21 12:04:47,046 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=62 pTM=0.213 tol=0.465
2023-02-21 12:04:47,047 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:04:47,050 reranking models by 'plddt' metric
2023-02-21 12:04:47,050 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=83.3 pTM=0.4
2023-02-21 12:04:47,050 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=77.4 pTM=0.34
2023-02-21 12:04:47,050 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=62 pTM=0.229
2023-02-21 12:04:47,050 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=62 pTM=0.213
2023-02-21 12:04:47,050 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=58.7 pTM=0.219
2023-02-21 12:04:47,718 Query 69/80: 7rn3 (length 30)
2023-02-21 12:04:48,324 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:04:57,964 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:05:07,570 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:05:15,182 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:05:20,789 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:05:26,392 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:05:33,004 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:05:39,601 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:05:49,207 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:05:57,202 Padding length to 36
2023-02-21 12:05:58,113 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=88.7 pTM=0.454
2023-02-21 12:05:58,988 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=88.9 pTM=0.456 tol=0.174
2023-02-21 12:05:59,861 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.9 pTM=0.458 tol=0.0387
2023-02-21 12:06:00,737 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=88.9 pTM=0.456 tol=0.0159
2023-02-21 12:06:00,737 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:06:01,622 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=89 pTM=0.458
2023-02-21 12:06:02,504 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=88.8 pTM=0.454 tol=0.119
2023-02-21 12:06:03,385 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=88.8 pTM=0.452 tol=0.0302
2023-02-21 12:06:04,267 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=88.8 pTM=0.45 tol=0.0106
2023-02-21 12:06:04,267 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:06:05,152 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.4 pTM=0.49
2023-02-21 12:06:06,034 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=91.8 pTM=0.488 tol=0.128
2023-02-21 12:06:06,915 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=91.5 pTM=0.483 tol=0.0272
2023-02-21 12:06:07,796 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=91.6 pTM=0.481 tol=0.0153
2023-02-21 12:06:07,796 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:06:08,683 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.4 pTM=0.456
2023-02-21 12:06:09,563 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=89.9 pTM=0.466 tol=0.145
2023-02-21 12:06:10,442 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=90.3 pTM=0.467 tol=0.0286
2023-02-21 12:06:11,322 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=90.4 pTM=0.466 tol=0.0106
2023-02-21 12:06:11,322 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:06:12,212 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=89.2 pTM=0.461
2023-02-21 12:06:13,094 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=89.2 pTM=0.46 tol=0.106
2023-02-21 12:06:13,975 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=89.7 pTM=0.464 tol=0.0604
2023-02-21 12:06:14,857 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=89.9 pTM=0.465 tol=0.0263
2023-02-21 12:06:14,857 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:06:14,860 reranking models by 'plddt' metric
2023-02-21 12:06:14,860 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=91.6 pTM=0.481
2023-02-21 12:06:14,860 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=90.4 pTM=0.466
2023-02-21 12:06:14,860 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=89.9 pTM=0.465
2023-02-21 12:06:14,860 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=88.9 pTM=0.456
2023-02-21 12:06:14,860 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=88.8 pTM=0.45
2023-02-21 12:06:15,532 Query 70/80: 1za8 (length 31)
2023-02-21 12:06:16,153 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:06:23,774 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:06:31,374 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:06:38,972 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:06:47,595 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:06:53,215 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:07:02,831 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:07:09,444 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:07:20,050 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:07:30,667 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:07:38,270 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:07:43,884 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:07:53,487 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:08:02,087 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:08:11,699 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:08:20,314 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:08:29,930 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:08:40,548 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:08:46,154 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:08:58,009 Padding length to 36
2023-02-21 12:08:58,907 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.5 pTM=0.368
2023-02-21 12:08:59,782 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=81 pTM=0.407 tol=0.397
2023-02-21 12:09:00,655 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.7 pTM=0.403 tol=0.189
2023-02-21 12:09:01,530 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=80.6 pTM=0.401 tol=0.233
2023-02-21 12:09:01,530 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:09:02,410 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=78.6 pTM=0.387
2023-02-21 12:09:03,288 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.9 pTM=0.405 tol=0.917
2023-02-21 12:09:04,165 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81.1 pTM=0.409 tol=0.147
2023-02-21 12:09:05,042 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=81.2 pTM=0.41 tol=0.077
2023-02-21 12:09:05,042 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:09:05,923 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=85.4 pTM=0.436
2023-02-21 12:09:06,800 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=87.2 pTM=0.456 tol=0.251
2023-02-21 12:09:07,676 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=88.6 pTM=0.46 tol=0.0953
2023-02-21 12:09:08,554 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=89 pTM=0.462 tol=0.0699
2023-02-21 12:09:08,554 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:09:09,432 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=83.1 pTM=0.422
2023-02-21 12:09:10,307 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=83.8 pTM=0.431 tol=0.585
2023-02-21 12:09:11,181 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.4 pTM=0.437 tol=0.198
2023-02-21 12:09:12,056 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.1 pTM=0.441 tol=0.0487
2023-02-21 12:09:12,056 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:09:12,937 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=84.4 pTM=0.441
2023-02-21 12:09:13,814 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86.6 pTM=0.457 tol=0.23
2023-02-21 12:09:14,690 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=87.3 pTM=0.461 tol=0.12
2023-02-21 12:09:15,567 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87.7 pTM=0.464 tol=0.0597
2023-02-21 12:09:15,567 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:09:15,570 reranking models by 'plddt' metric
2023-02-21 12:09:15,570 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=89 pTM=0.462
2023-02-21 12:09:15,570 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=87.7 pTM=0.464
2023-02-21 12:09:15,571 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.1 pTM=0.441
2023-02-21 12:09:15,571 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=81.2 pTM=0.41
2023-02-21 12:09:15,571 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=80.6 pTM=0.401
2023-02-21 12:09:16,381 Query 71/80: 2b38 (length 31)
2023-02-21 12:09:17,000 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:09:24,614 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:09:30,237 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:09:35,822 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:09:43,416 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:09:53,013 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:09:59,625 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:10:09,223 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:10:14,821 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:10:21,412 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:10:31,266 Padding length to 36
2023-02-21 12:10:32,177 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=86.6 pTM=0.467
2023-02-21 12:10:33,052 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.3 pTM=0.491 tol=0.278
2023-02-21 12:10:33,926 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=87.7 pTM=0.497 tol=0.0772
2023-02-21 12:10:34,801 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87.7 pTM=0.498 tol=0.0402
2023-02-21 12:10:34,801 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:10:35,682 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.4 pTM=0.475
2023-02-21 12:10:36,559 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.6 pTM=0.473 tol=0.226
2023-02-21 12:10:37,436 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=86.1 pTM=0.48 tol=0.0898
2023-02-21 12:10:38,313 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=86.4 pTM=0.486 tol=0.0518
2023-02-21 12:10:38,313 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:10:39,194 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=86.8 pTM=0.491
2023-02-21 12:10:40,071 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.5 pTM=0.511 tol=0.487
2023-02-21 12:10:40,947 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=90.2 pTM=0.529 tol=0.129
2023-02-21 12:10:41,824 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=90.8 pTM=0.531 tol=0.067
2023-02-21 12:10:41,824 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:10:42,702 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=82.9 pTM=0.434
2023-02-21 12:10:43,577 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.4 pTM=0.457 tol=0.238
2023-02-21 12:10:44,451 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=84.4 pTM=0.455 tol=0.348
2023-02-21 12:10:45,326 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.2 pTM=0.453 tol=0.749
2023-02-21 12:10:45,326 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:10:46,207 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.7 pTM=0.494
2023-02-21 12:10:47,084 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=86 pTM=0.489 tol=0.19
2023-02-21 12:10:47,961 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=87 pTM=0.503 tol=0.144
2023-02-21 12:10:48,838 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87.3 pTM=0.504 tol=0.0419
2023-02-21 12:10:48,838 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:10:48,841 reranking models by 'plddt' metric
2023-02-21 12:10:48,841 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=90.8 pTM=0.531
2023-02-21 12:10:48,841 rank_002_alphafold2_ptm_model_1_seed_000 pLDDT=87.7 pTM=0.498
2023-02-21 12:10:48,841 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=87.3 pTM=0.504
2023-02-21 12:10:48,842 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=86.4 pTM=0.486
2023-02-21 12:10:48,842 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=84.2 pTM=0.453
2023-02-21 12:10:49,505 Query 72/80: 2eri (length 31)
2023-02-21 12:10:50,131 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:10:56,746 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:11:03,346 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:11:10,948 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:11:16,569 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:11:22,173 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:11:30,787 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:11:36,391 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:11:42,993 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:11:50,610 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:11:57,467 Padding length to 36
2023-02-21 12:11:58,381 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.2 pTM=0.437
2023-02-21 12:11:59,259 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=84.5 pTM=0.437 tol=0.272
2023-02-21 12:12:00,135 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=84.6 pTM=0.436 tol=0.101
2023-02-21 12:12:01,010 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=84.4 pTM=0.435 tol=0.0368
2023-02-21 12:12:01,010 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:12:01,895 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=84.7 pTM=0.447
2023-02-21 12:12:02,777 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=84.8 pTM=0.446 tol=0.324
2023-02-21 12:12:03,659 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.1 pTM=0.446 tol=0.0797
2023-02-21 12:12:04,538 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85.3 pTM=0.448 tol=0.0565
2023-02-21 12:12:04,538 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:12:05,421 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=87.4 pTM=0.477
2023-02-21 12:12:06,300 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=88.7 pTM=0.485 tol=0.186
2023-02-21 12:12:07,179 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=88.4 pTM=0.482 tol=0.0476
2023-02-21 12:12:08,057 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=88.8 pTM=0.483 tol=0.0343
2023-02-21 12:12:08,057 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:12:08,938 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=86.8 pTM=0.454
2023-02-21 12:12:09,816 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=86.6 pTM=0.461 tol=0.131
2023-02-21 12:12:10,696 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=86.4 pTM=0.46 tol=0.0448
2023-02-21 12:12:11,573 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=86.8 pTM=0.46 tol=0.0347
2023-02-21 12:12:11,573 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:12:12,456 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=87.1 pTM=0.468
2023-02-21 12:12:13,335 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.2 pTM=0.47 tol=0.114
2023-02-21 12:12:14,213 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=87.1 pTM=0.467 tol=0.0389
2023-02-21 12:12:15,090 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=87 pTM=0.468 tol=0.0264
2023-02-21 12:12:15,090 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:12:15,093 reranking models by 'plddt' metric
2023-02-21 12:12:15,093 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=88.8 pTM=0.483
2023-02-21 12:12:15,094 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=87 pTM=0.468
2023-02-21 12:12:15,094 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=86.8 pTM=0.46
2023-02-21 12:12:15,094 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=85.3 pTM=0.448
2023-02-21 12:12:15,094 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=84.4 pTM=0.435
2023-02-21 12:12:15,928 Query 73/80: 2gj0 (length 31)
2023-02-21 12:12:16,539 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:12:24,138 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:12:29,740 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:12:38,346 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:12:45,947 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:12:51,554 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:12:59,160 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:13:07,762 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:13:13,363 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:13:18,968 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:13:26,835 Padding length to 36
2023-02-21 12:13:27,748 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=77.8 pTM=0.383
2023-02-21 12:13:28,623 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=78 pTM=0.397 tol=0.427
2023-02-21 12:13:29,497 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=78.8 pTM=0.397 tol=0.258
2023-02-21 12:13:30,371 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=78.4 pTM=0.394 tol=0.167
2023-02-21 12:13:30,371 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:13:31,252 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=77.2 pTM=0.388
2023-02-21 12:13:32,129 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=77.4 pTM=0.399 tol=0.303
2023-02-21 12:13:33,006 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=78.1 pTM=0.403 tol=0.109
2023-02-21 12:13:33,883 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=78.3 pTM=0.406 tol=0.0584
2023-02-21 12:13:33,883 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:13:34,764 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.8 pTM=0.431
2023-02-21 12:13:35,644 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.6 pTM=0.444 tol=0.562
2023-02-21 12:13:36,521 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.4 pTM=0.439 tol=0.133
2023-02-21 12:13:37,398 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=82.2 pTM=0.438 tol=0.119
2023-02-21 12:13:37,398 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:13:38,277 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=81.8 pTM=0.417
2023-02-21 12:13:39,152 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=81.6 pTM=0.432 tol=0.305
2023-02-21 12:13:40,027 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.8 pTM=0.434 tol=0.372
2023-02-21 12:13:40,901 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=81.7 pTM=0.434 tol=0.213
2023-02-21 12:13:40,902 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:13:41,782 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=80.6 pTM=0.424
2023-02-21 12:13:42,659 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.3 pTM=0.417 tol=0.357
2023-02-21 12:13:43,535 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=79.7 pTM=0.419 tol=0.325
2023-02-21 12:13:44,412 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=80.1 pTM=0.42 tol=0.321
2023-02-21 12:13:44,412 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:13:44,416 reranking models by 'plddt' metric
2023-02-21 12:13:44,416 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=82.2 pTM=0.438
2023-02-21 12:13:44,416 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=81.7 pTM=0.434
2023-02-21 12:13:44,416 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=80.1 pTM=0.42
2023-02-21 12:13:44,416 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=78.4 pTM=0.394
2023-02-21 12:13:44,416 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=78.3 pTM=0.406
2023-02-21 12:13:45,084 Query 74/80: 7s55 (length 31)
2023-02-21 12:13:45,676 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:13:52,271 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:13:59,881 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:14:06,481 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:14:16,102 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:14:25,708 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:14:31,314 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:14:41,913 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:14:47,506 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:14:55,507 Padding length to 36
2023-02-21 12:14:56,411 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.2 pTM=0.447
2023-02-21 12:14:57,286 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=87.5 pTM=0.465 tol=0.135
2023-02-21 12:14:58,160 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=88.1 pTM=0.467 tol=0.0374
2023-02-21 12:14:59,034 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=87.9 pTM=0.468 tol=0.0209
2023-02-21 12:14:59,034 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:14:59,915 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=86.9 pTM=0.473
2023-02-21 12:15:00,792 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=87.6 pTM=0.469 tol=0.162
2023-02-21 12:15:01,669 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=87.4 pTM=0.465 tol=0.0482
2023-02-21 12:15:02,546 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=87.5 pTM=0.465 tol=0.015
2023-02-21 12:15:02,546 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:15:03,426 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=91.3 pTM=0.515
2023-02-21 12:15:04,303 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=92.6 pTM=0.529 tol=0.201
2023-02-21 12:15:05,180 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=92.5 pTM=0.522 tol=0.0393
2023-02-21 12:15:06,062 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=92.8 pTM=0.524 tol=0.0209
2023-02-21 12:15:06,062 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:15:06,946 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=89.6 pTM=0.489
2023-02-21 12:15:07,825 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=91.1 pTM=0.507 tol=0.166
2023-02-21 12:15:08,704 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=91.6 pTM=0.51 tol=0.0529
2023-02-21 12:15:09,584 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=91.7 pTM=0.511 tol=0.0235
2023-02-21 12:15:09,584 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:15:10,474 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=90.6 pTM=0.513
2023-02-21 12:15:11,356 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=90.8 pTM=0.511 tol=0.115
2023-02-21 12:15:12,237 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=91.3 pTM=0.51 tol=0.0467
2023-02-21 12:15:13,119 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=91.4 pTM=0.511 tol=0.0232
2023-02-21 12:15:13,119 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:15:13,122 reranking models by 'plddt' metric
2023-02-21 12:15:13,122 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=92.8 pTM=0.524
2023-02-21 12:15:13,123 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=91.7 pTM=0.511
2023-02-21 12:15:13,123 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=91.4 pTM=0.511
2023-02-21 12:15:13,123 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=87.9 pTM=0.468
2023-02-21 12:15:13,123 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=87.5 pTM=0.465
2023-02-21 12:15:13,785 Query 75/80: 2mh1 (length 33)
2023-02-21 12:15:14,384 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:15:24,004 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:15:31,618 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:15:39,227 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:15:46,834 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:15:56,427 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:16:06,050 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:16:13,670 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:16:20,275 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:16:32,142 Padding length to 36
2023-02-21 12:16:33,062 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=81.4 pTM=0.47
2023-02-21 12:16:33,936 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.9 pTM=0.471 tol=0.445
2023-02-21 12:16:34,810 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=80.6 pTM=0.471 tol=0.155
2023-02-21 12:16:35,684 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=80.1 pTM=0.464 tol=0.111
2023-02-21 12:16:35,684 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:16:36,565 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=80.1 pTM=0.46
2023-02-21 12:16:37,442 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=79.1 pTM=0.456 tol=1.09
2023-02-21 12:16:38,318 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=79.2 pTM=0.451 tol=0.536
2023-02-21 12:16:39,200 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=79.3 pTM=0.451 tol=0.118
2023-02-21 12:16:39,200 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:16:40,091 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=81.7 pTM=0.488
2023-02-21 12:16:40,972 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.1 pTM=0.486 tol=1.46
2023-02-21 12:16:41,854 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=82.9 pTM=0.497 tol=0.375
2023-02-21 12:16:42,735 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=82.8 pTM=0.496 tol=0.378
2023-02-21 12:16:42,735 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:16:43,619 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=82.9 pTM=0.489
2023-02-21 12:16:44,499 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.6 pTM=0.511 tol=1.06
2023-02-21 12:16:45,379 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=84.1 pTM=0.509 tol=0.439
2023-02-21 12:16:46,259 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.5 pTM=0.512 tol=0.185
2023-02-21 12:16:46,259 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:16:47,144 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=85.1 pTM=0.531
2023-02-21 12:16:48,027 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=84 pTM=0.514 tol=2.01
2023-02-21 12:16:48,908 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=83.6 pTM=0.511 tol=1.41
2023-02-21 12:16:49,790 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=84.7 pTM=0.52 tol=0.459
2023-02-21 12:16:49,790 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:16:49,793 reranking models by 'plddt' metric
2023-02-21 12:16:49,793 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=84.7 pTM=0.52
2023-02-21 12:16:49,793 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=84.5 pTM=0.512
2023-02-21 12:16:49,794 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=82.8 pTM=0.496
2023-02-21 12:16:49,794 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=80.1 pTM=0.464
2023-02-21 12:16:49,794 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=79.3 pTM=0.451
2023-02-21 12:16:50,613 Query 76/80: 2po8 (length 34)
2023-02-21 12:16:51,216 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:16:56,823 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:17:07,436 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:17:18,101 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:17:23,718 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:17:31,321 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:17:41,936 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:17:51,553 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:18:02,372 Padding length to 36
2023-02-21 12:18:03,278 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=78.4 pTM=0.452
2023-02-21 12:18:04,152 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=78.7 pTM=0.455 tol=0.46
2023-02-21 12:18:05,026 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=79.2 pTM=0.46 tol=0.231
2023-02-21 12:18:05,901 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=79.2 pTM=0.459 tol=0.204
2023-02-21 12:18:05,901 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:18:06,787 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=78.9 pTM=0.46
2023-02-21 12:18:07,669 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=81.3 pTM=0.483 tol=0.261
2023-02-21 12:18:08,551 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=81.4 pTM=0.484 tol=0.0931
2023-02-21 12:18:09,433 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=81.5 pTM=0.483 tol=0.0489
2023-02-21 12:18:09,433 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:18:10,319 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=81 pTM=0.477
2023-02-21 12:18:11,200 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=81.8 pTM=0.482 tol=0.941
2023-02-21 12:18:12,081 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=80.9 pTM=0.473 tol=0.419
2023-02-21 12:18:12,963 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=81 pTM=0.474 tol=0.293
2023-02-21 12:18:12,963 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:18:13,846 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=82.4 pTM=0.504
2023-02-21 12:18:14,726 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=83.1 pTM=0.511 tol=0.305
2023-02-21 12:18:15,605 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=82.8 pTM=0.504 tol=0.0515
2023-02-21 12:18:16,485 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=82.9 pTM=0.502 tol=0.078
2023-02-21 12:18:16,485 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:18:17,371 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=80.5 pTM=0.485
2023-02-21 12:18:18,252 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=81.9 pTM=0.5 tol=0.183
2023-02-21 12:18:19,134 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.1 pTM=0.49 tol=0.25
2023-02-21 12:18:20,015 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=81.3 pTM=0.49 tol=0.146
2023-02-21 12:18:20,016 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:18:20,019 reranking models by 'plddt' metric
2023-02-21 12:18:20,019 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=82.9 pTM=0.502
2023-02-21 12:18:20,019 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=81.5 pTM=0.483
2023-02-21 12:18:20,019 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=81.3 pTM=0.49
2023-02-21 12:18:20,019 rank_004_alphafold2_ptm_model_3_seed_000 pLDDT=81 pTM=0.474
2023-02-21 12:18:20,019 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=79.2 pTM=0.459
2023-02-21 12:18:20,683 Query 77/80: 5wov (length 34)
2023-02-21 12:18:21,285 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:18:27,888 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:18:33,470 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:18:44,075 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:18:50,671 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:18:58,276 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:19:08,882 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:19:18,492 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:19:29,162 Padding length to 36
2023-02-21 12:19:30,072 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=78.8 pTM=0.465
2023-02-21 12:19:30,947 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=80.9 pTM=0.48 tol=0.376
2023-02-21 12:19:31,821 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=82.1 pTM=0.49 tol=0.116
2023-02-21 12:19:32,701 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.4 pTM=0.495 tol=0.0868
2023-02-21 12:19:32,701 alphafold2_ptm_model_1_seed_000 took 3.5s (3 recycles)
2023-02-21 12:19:33,586 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81 pTM=0.492
2023-02-21 12:19:34,468 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.3 pTM=0.503 tol=0.493
2023-02-21 12:19:35,350 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=83.1 pTM=0.511 tol=0.147
2023-02-21 12:19:36,233 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=84.8 pTM=0.532 tol=0.103
2023-02-21 12:19:36,233 alphafold2_ptm_model_2_seed_000 took 3.5s (3 recycles)
2023-02-21 12:19:37,118 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=80.3 pTM=0.481
2023-02-21 12:19:37,999 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=82.1 pTM=0.493 tol=0.386
2023-02-21 12:19:38,880 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=83.4 pTM=0.509 tol=0.249
2023-02-21 12:19:39,762 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=84.1 pTM=0.514 tol=0.0923
2023-02-21 12:19:39,762 alphafold2_ptm_model_3_seed_000 took 3.5s (3 recycles)
2023-02-21 12:19:40,645 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=78.9 pTM=0.463
2023-02-21 12:19:41,525 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=84.4 pTM=0.514 tol=0.491
2023-02-21 12:19:42,404 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=83.8 pTM=0.501 tol=0.19
2023-02-21 12:19:43,284 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=84.9 pTM=0.52 tol=0.185
2023-02-21 12:19:43,284 alphafold2_ptm_model_4_seed_000 took 3.5s (3 recycles)
2023-02-21 12:19:44,169 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=76.9 pTM=0.458
2023-02-21 12:19:45,051 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=83.3 pTM=0.501 tol=0.614
2023-02-21 12:19:45,932 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=82.9 pTM=0.506 tol=0.52
2023-02-21 12:19:46,814 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.9 pTM=0.501 tol=0.12
2023-02-21 12:19:46,814 alphafold2_ptm_model_5_seed_000 took 3.5s (3 recycles)
2023-02-21 12:19:46,818 reranking models by 'plddt' metric
2023-02-21 12:19:46,818 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=84.9 pTM=0.52
2023-02-21 12:19:46,818 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=84.8 pTM=0.532
2023-02-21 12:19:46,818 rank_003_alphafold2_ptm_model_3_seed_000 pLDDT=84.1 pTM=0.514
2023-02-21 12:19:46,818 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=82.9 pTM=0.501
2023-02-21 12:19:46,818 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=82.4 pTM=0.495
2023-02-21 12:19:47,493 Query 78/80: 1r1f (length 37)
2023-02-21 12:19:48,095 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:19:53,720 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:20:03,335 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:20:12,948 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:20:20,560 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:20:28,169 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:20:38,768 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:20:44,372 Sleeping for 10s. Reason: RATELIMIT
2023-02-21 12:20:56,260 Padding length to 39
2023-02-21 12:21:04,550 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=52.7 pTM=0.202
2023-02-21 12:21:05,452 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.348 tol=1.3
2023-02-21 12:21:06,355 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=67 pTM=0.382 tol=0.473
2023-02-21 12:21:07,258 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.393 tol=0.235
2023-02-21 12:21:07,258 alphafold2_ptm_model_1_seed_000 took 11.0s (3 recycles)
2023-02-21 12:21:08,168 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=54.3 pTM=0.249
2023-02-21 12:21:09,073 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=61.1 pTM=0.332 tol=0.883
2023-02-21 12:21:09,978 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=60.6 pTM=0.333 tol=0.369
2023-02-21 12:21:10,883 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=61.8 pTM=0.341 tol=0.363
2023-02-21 12:21:10,883 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 12:21:11,793 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.1 pTM=0.425
2023-02-21 12:21:12,699 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=78.1 pTM=0.457 tol=0.775
2023-02-21 12:21:13,604 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.1 pTM=0.467 tol=0.195
2023-02-21 12:21:14,509 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=80.9 pTM=0.479 tol=0.0862
2023-02-21 12:21:14,510 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 12:21:15,417 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.342
2023-02-21 12:21:16,321 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=72.5 pTM=0.43 tol=1.29
2023-02-21 12:21:17,224 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=69.4 pTM=0.413 tol=0.239
2023-02-21 12:21:18,128 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=72.6 pTM=0.434 tol=0.159
2023-02-21 12:21:18,128 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 12:21:19,037 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=70.2 pTM=0.381
2023-02-21 12:21:19,942 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.363 tol=0.381
2023-02-21 12:21:20,847 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=66.6 pTM=0.37 tol=0.289
2023-02-21 12:21:21,752 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.383 tol=0.414
2023-02-21 12:21:21,752 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 12:21:21,760 reranking models by 'plddt' metric
2023-02-21 12:21:21,760 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=80.9 pTM=0.479
2023-02-21 12:21:21,760 rank_002_alphafold2_ptm_model_4_seed_000 pLDDT=72.6 pTM=0.434
2023-02-21 12:21:21,760 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=68.2 pTM=0.393
2023-02-21 12:21:21,760 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=67.4 pTM=0.383
2023-02-21 12:21:21,760 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=61.8 pTM=0.341
2023-02-21 12:21:22,530 Query 79/80: 2mt8 (length 39)
2023-02-21 12:21:23,143 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:21:30,761 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:21:39,358 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:21:48,957 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:21:56,554 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:22:02,149 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:22:10,744 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:22:19,366 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:22:27,154 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=69.5 pTM=0.433
2023-02-21 12:22:28,052 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=70.4 pTM=0.429 tol=1.5
2023-02-21 12:22:28,952 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=72.1 pTM=0.444 tol=2.19
2023-02-21 12:22:29,855 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=73.6 pTM=0.449 tol=0.33
2023-02-21 12:22:29,855 alphafold2_ptm_model_1_seed_000 took 3.6s (3 recycles)
2023-02-21 12:22:30,769 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=70.4 pTM=0.429
2023-02-21 12:22:31,674 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=70.1 pTM=0.422 tol=4.34
2023-02-21 12:22:32,579 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=71.8 pTM=0.44 tol=0.625
2023-02-21 12:22:33,484 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=73.2 pTM=0.451 tol=0.302
2023-02-21 12:22:33,484 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 12:22:34,394 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=74.2 pTM=0.484
2023-02-21 12:22:35,300 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=76.3 pTM=0.482 tol=0.615
2023-02-21 12:22:36,205 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=77 pTM=0.488 tol=0.291
2023-02-21 12:22:37,111 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=77.4 pTM=0.491 tol=0.152
2023-02-21 12:22:37,111 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 12:22:38,019 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=73.2 pTM=0.47
2023-02-21 12:22:38,923 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=72.4 pTM=0.458 tol=0.875
2023-02-21 12:22:39,826 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=73.3 pTM=0.461 tol=0.607
2023-02-21 12:22:40,730 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=74.3 pTM=0.468 tol=0.355
2023-02-21 12:22:40,730 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 12:22:41,640 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=76.2 pTM=0.483
2023-02-21 12:22:42,546 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=75.4 pTM=0.472 tol=0.814
2023-02-21 12:22:43,450 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=74.1 pTM=0.464 tol=2.92
2023-02-21 12:22:44,356 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=75.2 pTM=0.47 tol=1.14
2023-02-21 12:22:44,356 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 12:22:44,360 reranking models by 'plddt' metric
2023-02-21 12:22:44,360 rank_001_alphafold2_ptm_model_3_seed_000 pLDDT=77.4 pTM=0.491
2023-02-21 12:22:44,360 rank_002_alphafold2_ptm_model_5_seed_000 pLDDT=75.2 pTM=0.47
2023-02-21 12:22:44,360 rank_003_alphafold2_ptm_model_4_seed_000 pLDDT=74.3 pTM=0.468
2023-02-21 12:22:44,360 rank_004_alphafold2_ptm_model_1_seed_000 pLDDT=73.6 pTM=0.449
2023-02-21 12:22:44,360 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=73.2 pTM=0.451
2023-02-21 12:22:45,029 Query 80/80: 5wow (length 39)
2023-02-21 12:22:45,854 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:22:53,466 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:23:02,061 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:23:09,663 Sleeping for 9s. Reason: RATELIMIT
2023-02-21 12:23:19,257 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:23:27,855 Sleeping for 5s. Reason: RATELIMIT
2023-02-21 12:23:33,483 Sleeping for 6s. Reason: RATELIMIT
2023-02-21 12:23:40,088 Sleeping for 7s. Reason: RATELIMIT
2023-02-21 12:23:47,688 Sleeping for 8s. Reason: RATELIMIT
2023-02-21 12:23:59,518 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=73.1 pTM=0.467
2023-02-21 12:24:00,421 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=76.4 pTM=0.493 tol=0.47
2023-02-21 12:24:01,329 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=77.2 pTM=0.495 tol=0.358
2023-02-21 12:24:02,234 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=77.2 pTM=0.491 tol=0.178
2023-02-21 12:24:02,235 alphafold2_ptm_model_1_seed_000 took 3.7s (3 recycles)
2023-02-21 12:24:03,147 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=73.6 pTM=0.459
2023-02-21 12:24:04,055 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=75.9 pTM=0.484 tol=0.57
2023-02-21 12:24:04,961 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=76.8 pTM=0.49 tol=1.58
2023-02-21 12:24:05,869 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=77.6 pTM=0.489 tol=0.691
2023-02-21 12:24:05,869 alphafold2_ptm_model_2_seed_000 took 3.6s (3 recycles)
2023-02-21 12:24:06,781 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=75.4 pTM=0.483
2023-02-21 12:24:07,688 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=78.1 pTM=0.506 tol=0.443
2023-02-21 12:24:08,594 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=79.8 pTM=0.521 tol=0.507
2023-02-21 12:24:09,502 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=78.9 pTM=0.5 tol=0.536
2023-02-21 12:24:09,502 alphafold2_ptm_model_3_seed_000 took 3.6s (3 recycles)
2023-02-21 12:24:10,420 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.474
2023-02-21 12:24:11,328 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.3 pTM=0.523 tol=0.646
2023-02-21 12:24:12,234 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=79.9 pTM=0.504 tol=0.426
2023-02-21 12:24:13,140 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=79.1 pTM=0.496 tol=0.361
2023-02-21 12:24:13,140 alphafold2_ptm_model_4_seed_000 took 3.6s (3 recycles)
2023-02-21 12:24:14,052 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=75.8 pTM=0.499
2023-02-21 12:24:14,960 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=79.2 pTM=0.526 tol=0.438
2023-02-21 12:24:15,867 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=79.1 pTM=0.516 tol=0.409
2023-02-21 12:24:16,775 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=77.7 pTM=0.501 tol=1.08
2023-02-21 12:24:16,775 alphafold2_ptm_model_5_seed_000 took 3.6s (3 recycles)
2023-02-21 12:24:16,779 reranking models by 'plddt' metric
2023-02-21 12:24:16,779 rank_001_alphafold2_ptm_model_4_seed_000 pLDDT=79.1 pTM=0.496
2023-02-21 12:24:16,779 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=78.9 pTM=0.5
2023-02-21 12:24:16,779 rank_003_alphafold2_ptm_model_5_seed_000 pLDDT=77.7 pTM=0.501
2023-02-21 12:24:16,779 rank_004_alphafold2_ptm_model_2_seed_000 pLDDT=77.6 pTM=0.489
2023-02-21 12:24:16,779 rank_005_alphafold2_ptm_model_1_seed_000 pLDDT=77.2 pTM=0.491
2023-02-21 12:24:17,457 Done
