snp	gene	gene_name	gene_chr	gene_start	gene_end	strand	num_var	beta_shape1	beta_shape2	true_df	pval_true_df	variant_id	tss_distance	chr	variant_pos	ref	alt	num_alt_per_site	rs_id_dbSNP151_GRCh38p7	minor_allele_samples	minor_allele_count	maf	ref_factor	pval_nominal	slope	slope_se	pval_perm	pval_beta	qval	pval_nominal_threshold	log2_aFC	log2_aFC_lower	log2_aFC_upper	eqtl	GWAS_index_snp	R2_EUR	R2_AFR	R2_SAS	R2_EAS	Sign_EUR	Sign_AFR	Sign_SAS	Sign_EAS	GWAS_index_snp_slope	best_trait	GTEx_snps	GWAS_snps	shared_snps	eSNP_in_GWAS	GWAS_index_SNP_in_eQTL	H1_hypothesis_eQTL	H2_hypothesis_GWAS	H3_hypothesis_different	H4_hypothesis_shared	number_snps_credible_set	H4_snp	coloc_likely_hypothesis
chr10:102467073:C:T	ENSG00000138111.14	MFSD13A	chr10	102461395	102477045	+	4254	1.03696	247.728	250.172	4.31762e-18	chr10_102467073_C_T_b38	5678	chr10	102467073	C	T	1	rs1984795	273	368	0.5	1	2.96004e-21	-0.365323	0.0357055	9.999e-05	2.94462e-16	1.39864e-15	0.000318314	-0.383847	-0.446087	-0.331429	ENSG00000138111-chr10:102467073:C:T	chr10:102465559:C:G	0.834	0.897	0.951	0.997	+	+	+	+	0.0685	UC	4254	1924	653	TRUE	TRUE	0.00105979834826672	3.86346619403714e-19	0.231703573996039	0.767236627655695	17	chr10:102467226:A:G	PP.H4.abf
chr10:47985171:G:A	ENSG00000270025.2	BMS1P7	chr10	48050282	48060016	-	5552	1.05572	647.813	258.305	4.97079e-08	chr10_47985171_G_A_b38	-74845	chr10	47985171	G	A	1	rs1240271342	197	240	0.326087	1	4.71095e-09	-0.429392	0.0711496	9.999e-05	1.76576e-05	2.86633e-05	0.000128711	-1.285637	-1.59468	-1.033257	ENSG00000270025-chr10:47985171:G:A	chr10:48182406:G:T	0.558	0.263	0.57	0.299	-	-	-	-	-0.0799	CD	5552	933	252	TRUE	TRUE	0.00107602859049857	0.000322697149446228	0.321268311301953	0.677331884417777	6	chr10:48004074:G:A	PP.H4.abf
chr10:58282426:G:A	ENSG00000122873.11	CISD1	chr10	58269058	58289586	+	7632	1.04709	552.818	256.821	8.78573e-15	chr10_58282426_G_A_b38	13368	chr10	58282426	G	A	1	rs2790188	167	210	0.285326	1	6.51724e-17	-0.295702	0.0333081	9.999e-05	1.39516e-12	4.88315e-12	0.000147044	-0.232416	-0.262445	-0.183476	ENSG00000122873-chr10:58282426:G:A	chr10:58243611:T:C	0.987	0.985	0.989	0.995	+	+	+	+	-0.0827	IBD	7632	2149	976	TRUE	TRUE	3.88220295340075e-09	2.16293329847096e-14	0.224058316061953	0.775941680055821	177	chr10:58243611:T:C	PP.H4.abf
chr10:73841895:A:T	ENSG00000214655.10	ZSWIM8	chr10	73785582	73801797	+	5204	1.04457	334.384	261.943	4.75586e-05	chr10_73841895_A_T_b38	56313	chr10	73841895	A	T	1	rs2243610	185	227	0.308424	1	1.43313e-05	0.109475	0.0248133	0.0127987	0.0128642	0.0123294	0.00024127	0.052476	0.026572	0.074378	ENSG00000214655-chr10:73841895:A:T	chr10:73903978:A:G	0.629	NA	0.383	0.353	-	NA	-	-	0.1157	CD	5204	1752	529	TRUE	TRUE	1.56842893912165e-12	0.0304020557661047	0.0466934792925666	0.92290446493876	6	chr10:73840192:CGA:C	PP.H4.abf
chr10:92670740:A:C	ENSG00000236493.2	EIF2S2P3	chr10	92668745	92669743	-	6930	1.0402	635.748	263.224	4.3701e-07	chr10_92670740_A_C_b38	997	chr10	92670740	A	C	1	rs2185756	223	279	0.379076	1	7.61329e-08	0.300284	0.0544595	0.00029997	0.000196414	0.000270995	0.000125266	0.795874	0.556855	1.001258	ENSG00000236493-chr10:92670740:A:C	chr10:92669710:C:T	0.522	0.276	0.47	0.359	+	+	+	+	0.0695	IBD	6930	2091	900	TRUE	TRUE	3.9153987731957e-07	0.0011170727979618	0.157570036340725	0.841312496560404	2	chr10:92669710:C:T	PP.H4.abf
chr10:99527091:A:G	ENSG00000228778.2	RP11-129J12.1	chr10	99526948	99528467	+	6382	1.04903	462.919	254.522	1.03192e-23	chr10_99527091_A_G_b38	143	chr10	99527091	A	G	1	rs11190135	266	361	0.490489	-1	1.71738e-27	-0.513309	0.0426147	9.999e-05	4.71608e-22	3.39379e-21	0.000176606	-0.889199	-1.037401	-0.755207	ENSG00000228778-chr10:99527091:A:G	chr10:99524480:T:G	0.994	0.605	0.991	0.993	+	+	+	+	-0.1623	IBD	6382	1280	527	TRUE	TRUE	2.44554382568904e-67	1.93196432787078e-27	0.0581385055299551	0.941861494470057	12	chr10:99528007:G:A	PP.H4.abf
chr10:99527091:A:G	ENSG00000257582.5	LINC01475	chr10	99526350	99531177	-	6367	1.04101	477.446	257.098	1.11484e-31	chr10_99527091_A_G_b38	-4086	chr10	99527091	A	G	1	rs11190135	266	361	0.490489	-1	1.85554e-36	-0.557569	0.0384257	9.999e-05	3.6218e-30	4.23528e-29	0.0001672	-1.069151	-1.186128	-0.908652	ENSG00000257582-chr10:99527091:A:G	chr10:99524480:T:G	0.994	0.605	0.991	0.993	+	+	+	+	-0.1623	IBD	6367	1280	527	TRUE	TRUE	3.18960527091966e-67	6.04025753073691e-41	0.0761318149269975	0.923868185073011	10	chr10:99527227:C:T	PP.H4.abf
chr11:114532952:G:A	ENSG00000238724.1	snoU13	chr11	114527129	114527232	+	6648	1.0289	871.58	266.599	4.00433e-08	chr11_114532952_G_A_b38	5823	chr11	114532952	G	A	1	rs11215037	216	275	0.373641	1	6.41434e-09	-0.178623	0.0298754	9.999e-05	2.56217e-05	4.05811e-05	8.83038e-05	-0.459502	-0.745426	-0.283386	ENSG00000238724-chr11:114532952:G:A	chr11:114516108:C:T	0.984	0.695	0.962	0.981	+	+	+	+	-0.0922	UC	6648	1355	582	TRUE	TRUE	5.13809712715446e-11	3.85346772964497e-06	0.0268329909476361	0.973163155533245	17	chr11:114516108:C:T	PP.H4.abf
chr11:114559212:A:G	ENSG00000270204.1	RP11-172C16.5	chr11	114517864	114518371	+	6661	1.03385	756.4	257.796	1.07839e-07	chr11_114559212_A_G_b38	41348	chr11	114559212	A	G	1	rs648541	228	293	0.398098	1	1.10991e-08	-0.206925	0.035202	9.999e-05	5.84436e-05	8.75947e-05	0.000103292	-0.716046	-0.857344	-0.330171	ENSG00000270204-chr11:114559212:A:G	chr11:114516108:C:T	0.985	0.53	0.953	0.96	+	+	+	+	-0.0922	UC	6661	1355	582	TRUE	TRUE	3.50907312916395e-11	8.75487149207683e-06	0.0180082824554976	0.981982962637903	12	chr11:114559887:C:T	PP.H4.abf
chr11:114559212:A:G	ENSG00000095110.7	NXPE1	chr11	114521715	114559895	-	6627	1.04401	872.499	264.49	1.32107e-21	chr11_114559212_A_G_b38	-683	chr11	114559212	A	G	1	rs648541	228	293	0.398098	1	3.82561e-24	-0.233774	0.0210866	9.999e-05	1.83624e-19	1.10132e-18	9.23229e-05	-0.675175	-0.859448	-0.505984	ENSG00000095110-chr11:114559212:A:G	chr11:114516108:C:T	0.985	0.53	0.953	0.96	+	+	+	+	-0.0922	UC	6627	1355	582	TRUE	TRUE	3.00091293846717e-11	1.44991672530808e-24	0.0152554793506302	0.984744520619354	7	chr11:114559887:C:T	PP.H4.abf
chr11:114560832:T:C	ENSG00000076043.9	REXO2	chr11	114439386	114450279	+	6746	1.04565	845.816	262.06	4.5322e-05	chr11_114560832_T_C_b38	121446	chr11	114560832	T	C	1	rs560174	227	293	0.398098	1	1.36313e-05	0.0935358	0.0211452	0.0292971	0.0317531	0.0268932	9.57008e-05	0.081433	0.045635	0.117804	ENSG00000076043-chr11:114560832:T:C	chr11:114516108:C:T	0.976	0.478	0.934	0.934	+	+	+	+	-0.0922	UC	6746	1355	582	TRUE	TRUE	4.52058080107111e-11	0.0186425415521199	0.0235064522718812	0.957851006096346	8	chr11:114559887:C:T	PP.H4.abf
chr11:64329761:A:G	ENSG00000168071.21	CCDC88B	chr11	64340223	64357534	+	5224	1.06441	592.407	256.545	2.67851e-11	chr11_64329761_A_G_b38	-10462	chr11	64329761	A	G	1	rs694739	180	216	0.293478	1	6.84935e-13	-0.231715	0.030848	9.999e-05	4.85078e-09	1.21117e-08	0.000144341	-0.488643	-0.592973	-0.407061	ENSG00000168071-chr11:64329761:A:G	chr11:64338819:T:C	0.985	0.273	0.867	0.838	+	+	+	+	-0.0951	CD	5224	988	268	TRUE	TRUE	7.48183957833193e-07	5.41306001418016e-10	0.0189071733348003	0.981092077939916	6	chr11:64329761:A:G	PP.H4.abf
chr11:65828226:G:A	ENSG00000172803.17	SNX32	chr11	65833641	65853701	+	4776	1.03677	439.57	258.276	7.64124e-55	chr11_65828226_G_A_b38	-5415	chr11	65828226	G	A	1	rs111953392	110	123	0.16712	1	5.16781e-63	0.939633	0.0434535	9.999e-05	4.23105e-54	1.69373e-52	0.000179307	1.72705	1.637996	1.867548	ENSG00000172803-chr11:65828226:G:A	chr11:65873091:G:A	0.323	NA	NA	NA	-	NA	NA	NA	-0.0757	CD	4776	696	229	TRUE	TRUE	0.00404748908585153	1.84387639865162e-90	0.485060435670207	0.510892075243948	1	chr11:65834089:G:C	PP.H4.abf
chr11:65877883:A:G	ENSG00000172543.7	CTSW	chr11	65879809	65883741	+	4737	1.04058	391.218	253.009	9.69739e-60	chr11_65877883_A_G_b38	-1926	chr11	65877883	A	G	1	rs596002	154	191	0.259511	-1	4.69997e-70	0.785589	0.0333339	9.999e-05	1.91482e-59	1.03649e-57	0.000203784	3.545963	3.308588	3.907608	ENSG00000172543-chr11:65877883:A:G	chr11:65873091:G:A	0.448	0.896	0.602	0.623	+	+	+	+	-0.0757	CD	4737	696	229	TRUE	TRUE	0.00105265396455702	1.36387638117362e-112	0.125411816298204	0.873535529737228	5	chr11:65879086:C:A	PP.H4.abf
chr11:65882513:T:C	ENSG00000172500.12	FIBP	chr11	65883921	65888539	-	4761	1.07396	388.337	250.579	0.000115865	chr11_65882513_T_C_b38	-6026	chr11	65882513	T	C	1	rs687672	153	189	0.256793	-1	2.6186e-05	-0.151912	0.0355672	0.030297	0.0338225	0.0283195	0.000226272	-0.092918	-0.120211	-0.049634	ENSG00000172500-chr11:65882513:T:C	chr11:65873091:G:A	0.446	0.899	0.602	0.602	+	+	+	+	-0.0757	CD	4761	696	229	TRUE	TRUE	0.00128112400309654	0.0769524442401757	0.15292636854905	0.768198624637493	22	chr11:65873091:G:A	PP.H4.abf
chr12:119671479:AGGCACCTCTTCACAGGAC:A	ENSG00000111725.10	PRKAB1	chr12	119667753	119681630	+	6702	1.04545	798.969	261.085	1.10132e-12	chr12_119671479_AGGCACCTCTTCACAGGAC_A_b38	3726	chr12	119671479	AGGCACCTCTTCACAGGAC	A	1	rs138621699	44	45	0.0611413	1	2.85723e-14	0.340016	0.0425223	9.999e-05	3.34386e-10	9.39892e-10	0.000101252	0.406287	0.296174	0.512095	ENSG00000111725-chr12:119671479:AGGCACCTCTTCACAGGAC:A	chr12:119709120:G:A	0.88	0.889	0.942	NA	+	+	+	NA	0.1102	IBD	6702	776	285	TRUE	TRUE	7.94209550284873e-05	6.37067269438949e-11	0.0125345273537618	0.98738605162713	1	chr12:119709120:G:A	PP.H4.abf
chr12:6384185:A:G	ENSG00000111321.10	LTBR	chr12	6375225	6391563	+	7456	1.04389	1209.84	267.327	6.64011e-46	chr12_6384185_A_G_b38	8960	chr12	6384185	A	G	1	rs10849448	132	150	0.203804	-1	5.62373e-51	-0.636472	0.0346227	9.999e-05	1.11976e-44	2.73014e-43	6.65579e-05	-0.381389	-0.409141	-0.346843	ENSG00000111321-chr12:6384185:A:G	chr12:6402491:G:A	0.212	NA	0.232	0.315	+	NA	+	+	0.0914	CD	7456	250	113	TRUE	TRUE	7.75140507334716e-06	1.96005015103777e-66	0.205597744311957	0.794394504282967	1	chr12:6384185:A:G	PP.H4.abf
chr15:41284043:C:T	ENSG00000247556.6	OIP5-AS1	chr15	41283990	41309267	+	6158	1.02974	562.619	259.746	5.59904e-24	chr15_41284043_C_T_b38	53	chr15	41284043	C	T	1	rs11267024	214	267	0.362772	1	2.82633e-27	0.393097	0.0328013	9.999e-05	7.63721e-22	5.41441e-21	0.000137142	0.198669	0.176372	0.222876	ENSG00000247556-chr15:41284043:C:T	chr15:41271752:A:G	0.459	NA	0.275	NA	+	NA	+	NA	-0.0653	UC	6158	3246	1057	TRUE	TRUE	0.000828311157441414	3.26893142488811e-27	0.104476189028087	0.894695499814468	7	chr15:41284043:C:T	PP.H4.abf
chr16:23874207:C:T	ENSG00000166501.12	PRKCB	chr16	23836001	24220611	+	7461	1.03953	1043.37	267.603	5.58283e-14	chr16_23874207_C_T_b38	38206	chr16	23874207	C	T	1	rs77165148	125	140	0.190217	1	2.1267e-15	0.324847	0.0387675	9.999e-05	2.2557e-11	7.11659e-11	7.61772e-05	0.497861	0.402924	0.574632	ENSG00000166501-chr16:23874207:C:T	chr16:23857964:G:A	0.898	NA	0.9	0.889	+	NA	+	+	-0.0932	UC	7461	1727	770	TRUE	TRUE	1.4445824408192e-07	2.23413267977222e-12	0.0287221847428017	0.97127767079672	7	chr16:23860300:C:T	PP.H4.abf
chr16:28333653:A:C	ENSG00000261089.1	CDC37P2	chr16	28413703	28415018	+	5121	1.02657	712.059	268.2	1.84237e-05	chr16_28333653_A_C_b38	-80050	chr16	28333653	A	C	1	rs62031390	229	283	0.384511	1	6.32296e-06	-0.226163	0.0491916	0.00909909	0.0114822	0.0111652	0.000107317	-0.656303	-0.955855	-0.325278	ENSG00000261089-chr16:28333653:A:C	chr16:28519966:A:G	0.712	NA	0.384	NA	+	NA	+	NA	0.0876	IBD	5121	3571	994	TRUE	TRUE	3.90220837585851e-15	0.0245010698340985	0.186891196376618	0.788607733789279	21	chr16:28487970:A:G	PP.H4.abf
chr16:28513291:C:G	ENSG00000188322.4	SBK1	chr16	28292519	28323849	+	5270	1.0583	728.545	262.947	8.28885e-06	chr16_28513291_C_G_b38	220772	chr16	28513291	C	G	1	rs240707	263	342	0.464674	1	2.07546e-06	-0.194553	0.0401867	0.00439956	0.00435584	0.00469144	0.000115314	-0.378749	-0.485438	-0.284399	ENSG00000188322-chr16:28513291:C:G	chr16:28519966:A:G	0.707	NA	0.693	NA	+	NA	+	NA	0.0876	IBD	5270	3571	994	TRUE	TRUE	1.9383721257782e-15	0.00307535003767906	0.0923229417283941	0.904601708233924	18	chr16:28523682:A:G	PP.H4.abf
chr16:28518628:T:C	ENSG00000233232.6	NPIPB7	chr16	28456372	28471175	-	5010	1.05027	699.372	265.654	6.67105e-06	chr16_28518628_T_C_b38	47453	chr16	28518628	T	C	1	rs240704	236	294	0.399457	1	1.83555e-06	-0.266427	0.0547359	0.00409959	0.00347638	0.00383001	0.000117331	-0.462684	-0.691578	-0.244104	ENSG00000233232-chr16:28518628:T:C	chr16:28519966:A:G	0.845	NA	0.627	NA	+	NA	+	NA	0.0876	IBD	5010	3571	994	TRUE	TRUE	2.27742332176518e-15	0.00350655215405008	0.108646632570725	0.887846815275224	25	chr16:28518395:C:T	PP.H4.abf
chr16:28633806:C:T	ENSG00000196993.8	NPIPB9	chr16	28751787	28772807	+	5021	1.02804	694.272	266.221	1.14993e-10	chr16_28633806_C_T_b38	-117981	chr16	28633806	C	T	1	rs111820348	173	201	0.273098	1	9.08199e-12	-0.450961	0.0635002	9.999e-05	4.98817e-08	1.1062e-07	0.000110563	-1.265618	-1.54096	-0.88104	ENSG00000196993-chr16:28633806:C:T	chr16:28519966:A:G	0.495	NA	0.271	0.219	+	NA	+	+	0.0876	IBD	5021	3571	994	TRUE	TRUE	9.48654693666319e-15	3.10547736355292e-07	0.455718711478296	0.544280977973957	73	chr16:28496748:C:T	PP.H4.abf
chr16:28826194:T:C	ENSG00000178952.10	TUFM	chr16	28842411	28846408	-	4861	1.03112	639.094	263.835	4.69983e-14	chr16_28826194_T_C_b38	-20214	chr16	28826194	T	C	1	rs8049439	239	301	0.408967	1	1.10866e-15	0.156492	0.0184678	9.999e-05	1.39435e-11	4.48289e-11	0.000121241	0.170329	0.142005	0.186662	ENSG00000178952-chr16:28826194:T:C	chr16:28519966:A:G	0.625	NA	0.263	NA	+	NA	+	NA	0.0876	IBD	4861	3571	994	TRUE	TRUE	3.10100531451032e-16	2.58863762565725e-13	0.0139284592560536	0.986071540743685	2	chr16:28846324:A:G	PP.H4.abf
chr16:28831263:G:GGTTGT	ENSG00000251417.2	RP11-1348G14.4	chr16	28802743	28817828	+	5015	1.01894	689.125	265.348	1.77178e-14	chr16_28831263_G_GGTTGT_b38	28520	chr16	28831263	G	GGTTGT	1	rs10658897	210	258	0.350543	1	4.47328e-16	-0.513821	0.0597163	9.999e-05	7.52469e-12	2.47563e-11	0.000108309	-0.610749	-0.752349	-0.482849	ENSG00000251417-chr16:28831263:G:GGTTGT	chr16:28519966:A:G	0.624	0.404	0.282	0.342	+	+	+	+	0.0876	IBD	5015	3571	994	TRUE	TRUE	9.34330126354444e-15	1.1992027882968e-11	0.448822300594351	0.551177699393646	23	chr16:28846324:A:G	PP.H4.abf
chr16:28831263:G:GGTTGT	ENSG00000196296.13	ATP2A1	chr16	28878405	28904420	+	4833	1.05609	597.553	260.212	7.03249e-05	chr16_28831263_G_GGTTGT_b38	-47142	chr16	28831263	G	GGTTGT	1	rs10658897	210	258	0.350543	1	2.0946e-05	0.199902	0.0462339	0.0326967	0.0335916	0.0281758	0.000139686	0.332706	0.211657	0.425398	ENSG00000196296-chr16:28831263:G:GGTTGT	chr16:28519966:A:G	0.624	0.404	0.282	0.342	+	+	+	+	0.0876	IBD	4833	3571	994	TRUE	TRUE	7.04544989363535e-15	0.0494252917396909	0.338244165201161	0.612330543059143	86	chr16:28523682:A:G	PP.H4.abf
chr16:30281179:A:T	ENSG00000183336.8	BOLA2	chr16	29453593	29454964	-	4041	1.04207	475.021	258.335	9.22478e-18	chr16_30281179_A_T_b38	826215	chr16	30281179	A	T	1	rs79379134	243	310	0.421196	1	2.9762e-20	-0.365878	0.0368552	9.999e-05	1.07073e-15	4.84003e-15	0.000168587	-0.683438	-0.834201	-0.595534	ENSG00000183336-chr16:30281179:A:T	chr16:30328432:G:A	0.957	NA	0.884	0.951	+	NA	+	+	0.087	UC	4041	4877	1178	TRUE	TRUE	5.37961024404313e-07	1.45555343049327e-17	0.0863783359684231	0.913621126070549	6	chr16:30323602:G:A	PP.H4.abf
chr16:30308986:G:T	ENSG00000183604.14	SMG1P5	chr16	30267553	30335374	-	3245	1.05773	361.426	253.576	8.22701e-12	chr16_30308986_G_T_b38	-26388	chr16	30308986	G	T	1	rs4471699	226	290	0.394022	1	1.26179e-13	-0.418735	0.0538776	9.999e-05	9.33253e-10	2.50302e-09	0.000232035	-0.41491	-0.480932	-0.351459	ENSG00000183604-chr16:30308986:G:T	chr16:30328432:G:A	0.995	1	1	0.99	+	+	+	+	0.087	UC	3245	4877	1277	TRUE	TRUE	8.52052108549657e-08	2.07143914676983e-10	0.0197098884939715	0.980290026093671	7	chr16:30312059:G:A	PP.H4.abf
chr16:30331915:G:A	ENSG00000169203.16	NPIPB12	chr16	29483642	29505999	-	4074	1.02853	501.448	260.604	1.12666e-15	chr16_30331915_G_A_b38	825916	chr16	30331915	G	A	1	rs140935476	227	291	0.39538	1	1.04557e-17	0.479259	0.0524742	9.999e-05	2.49633e-13	9.31703e-13	0.000153303	0.645877	0.530696	0.724695	ENSG00000169203-chr16:30331915:G:A	chr16:30328432:G:A	0.997	1	1	1	+	+	+	+	0.087	UC	4074	4877	1277	TRUE	TRUE	7.17752407382435e-08	1.17154253585169e-14	0.0164454563749482	0.983554471849797	5	chr16:30328432:G:A	PP.H4.abf
chr16:30336410:A:G	ENSG00000273724.1	RP11-347C12.12	chr16	30336400	30343336	+	3249	1.06246	397.894	258.975	1.12217e-09	chr16_30336410_A_G_b38	10	chr16	30336410	A	G	1	rs8051096	217	265	0.360054	1	6.37653e-11	-0.460246	0.0678639	9.999e-05	1.7426e-07	3.63675e-07	0.000213684	-0.758922	-0.956415	-0.555115	ENSG00000273724-chr16:30336410:A:G	chr16:30328432:G:A	0.541	NA	0.856	0.94	+	NA	+	+	0.087	UC	3249	4877	1277	TRUE	TRUE	1.61453702551362e-07	1.26105088658258e-06	0.0382436633342572	0.961754914155961	7	chr16:30328432:G:A	PP.H4.abf
chr16:75303693:C:T	ENSG00000153774.8	CFDP1	chr16	75293698	75433485	-	8612	1.03638	883.435	263.384	2.4596e-10	chr16_75303693_C_T_b38	-129792	chr16	75303693	C	T	1	rs3784937	165	191	0.259511	-1	1.65818e-11	-0.207416	0.029614	9.999e-05	1.224e-07	2.59153e-07	8.91189e-05	-0.134682	-0.162262	-0.097967	ENSG00000153774-chr16:75303693:C:T	chr16:75463237:C:T	NA	NA	NA	0.565	NA	NA	NA	+	-0.0515	IBD	8612	2187	857	TRUE	TRUE	0.0015216315065385	1.08681461079061e-07	0.324654714564698	0.673823544738975	22	chr16:75303693:C:T	PP.H4.abf
chr16:75417563:G:A	ENSG00000166822.12	TMEM170A	chr16	75443054	75465497	-	8701	1.02588	897.681	263.82	6.58505e-05	chr16_75417563_G_A_b38	-47934	chr16	75417563	G	A	1	rs11149831	227	289	0.392663	-1	2.21628e-05	0.0785692	0.0182276	0.0509949	0.0527385	0.0409659	8.49476e-05	0.075434	0.047143	0.105393	ENSG00000166822-chr16:75417563:G:A	chr16:75463237:C:T	0.818	0.243	0.642	0.856	+	+	+	+	-0.0515	IBD	8701	2187	857	TRUE	TRUE	0.000730841997383302	0.137715576523063	0.155550447720106	0.705359008404211	31	chr16:75466377:T:G	PP.H4.abf
chr16:80804680:G:T	ENSG00000166446.14	CDYL2	chr16	80597906	80804329	-	11736	1.04166	1726.21	268.287	3.63594e-05	chr16_80804680_G_T_b38	351	chr16	80804680	G	T	1	rs187975120	43	43	0.0584239	1	1.34568e-05	-0.442281	0.0999176	0.049795	0.0531996	0.0412422	4.63394e-05	-0.583114	-0.940703	-0.385919	ENSG00000166446-chr16:80804680:G:T	chr16:80804680:G:T	1	1	1	1	+	+	+	+	0.2347	IBD	11736	760	289	TRUE	TRUE	1.58414239612353e-05	0.0304829449736944	0.00881715931340688	0.960633938886735	1	chr16:80804680:G:T	PP.H4.abf
chr16:85976134:T:C	ENSG00000140968.10	IRF8	chr16	85898803	85922609	+	12047	1.03634	2677.05	271.358	4.33795e-07	chr16_85976134_T_C_b38	77331	chr16	85976134	T	C	1	rs16940186	113	120	0.163043	1	1.18235e-07	0.204717	0.0377148	0.00109989	0.000893634	0.00110506	2.94072e-05	0.33658	0.259286	0.413713	ENSG00000140968-chr16:85976134:T:C	chr16:85980635:T:C	0.858	NA	0.866	0.866	+	NA	+	+	0.124	IBD	12047	467	232	TRUE	TRUE	4.62487277151483e-22	5.36771289084944e-05	0.00131618575715344	0.99863013711394	1	chr16:85980635:T:C	PP.H4.abf
chr17:40648309:A:C	ENSG00000278834.1	RP11-458J1.1	chr17	40648509	40649718	+	6956	1.06884	586.001	255.308	3.47516e-15	chr17_40648309_A_C_b38	-200	chr17	40648309	A	C	1	rs3752026	191	229	0.311141	-1	1.79278e-17	0.379549	0.0419005	9.999e-05	3.09572e-13	1.14324e-12	0.000147787	0.350627	0.272202	0.424178	ENSG00000278834-chr17:40648309:A:C	chr17:40619224:C:T	0.709	0.441	0.849	0.775	+	+	+	+	0.0922	UC	6956	1054	326	TRUE	TRUE	1.00798959003836e-09	1.4908606347593e-14	0.0859906409894851	0.91400935800251	10	chr17:40648309:A:C	PP.H4.abf
chr18:12777326:T:C	ENSG00000260302.1	RP11-973H7.1	chr18	12774651	12775923	-	8162	1.03787	1074.39	267.487	1.21356e-19	chr18_12777326_T_C_b38	1403	chr18	12777326	T	C	1	rs7237497	101	108	0.146739	-1	1.0485e-21	-0.862288	0.0831764	9.999e-05	3.20985e-17	1.62986e-16	7.36099e-05	-1.891698	-2.188157	-1.506552	ENSG00000260302-chr18:12777326:T:C	chr18:12823057:G:T	0.342	NA	NA	0.206	+	NA	NA	+	-0.1164	IBD	8162	1276	480	TRUE	TRUE	2.59452438344595e-20	5.73165159512342e-16	0.174705403928917	0.825294596071087	10	chr18:12778716:C:T	PP.H4.abf
chr18:51140575:A:G	ENSG00000141646.13	SMAD4	chr18	51028394	51085045	+	6995	1.03964	898.648	267.924	1.73362e-05	chr18_51140575_A_G_b38	112181	chr18	51140575	A	G	1	rs9952138	229	279	0.379076	1	5.84618e-06	0.0955429	0.0207023	0.0118988	0.0128814	0.0123445	8.84735e-05	0.047202	0.025698	0.065182	ENSG00000141646-chr18:51140575:A:G	chr18:50977537:G:A	0.653	NA	0.746	0.6	+	NA	+	+	0.0558	IBD	6995	2015	528	TRUE	TRUE	0.00012842939059854	0.0148395457287975	0.111691653168197	0.873323440746203	62	chr18:51039183:C:T	PP.H4.abf
chr19:18419811:C:CG	ENSG00000130511.15	SSBP4	chr19	18418864	18434387	+	7238	1.04095	1151.73	268.025	4.81122e-07	chr19_18419811_C_CG_b38	947	chr19	18419811	C	CG	1	rs202214958	90	98	0.151703	1	1.10713e-07	-0.227427	0.0417992	0.00039996	0.000400315	0.000526173	6.93048e-05	-0.165646	-0.217289	-0.110438	ENSG00000130511-chr19:18419811:C:CG	chr19:18522945:T:C	NA	NA	0.217	0.286	NA	NA	+	+	0.0774	CD	7238	2189	824	TRUE	TRUE	0.000646867823601813	0.000793712073939398	0.265375450459558	0.733182040254902	59	chr19:18448066:A:G	PP.H4.abf
chr19:18482743:T:C	ENSG00000105656.12	ELL	chr19	18442663	18522127	-	7077	1.05433	1027.1	264.722	2.88252e-05	chr19_18482743_T_C_b38	-39384	chr19	18482743	T	C	1	rs8105994	240	308	0.418478	1	9.07442e-06	0.12588	0.027872	0.0210979	0.0235173	0.0207787	8.08543e-05	0.126962	0.087107	0.152507	ENSG00000105656-chr19:18482743:T:C	chr19:18522945:T:C	0.648	0.681	0.82	0.95	+	+	+	+	0.0774	CD	7077	2189	824	TRUE	TRUE	0.000321387052399598	0.0343848322367463	0.131378447013902	0.833831749630606	46	chr19:18501447:G:A	PP.H4.abf
chr19:36982439:T:C	ENSG00000198453.12	ZNF568	chr19	36916329	36997932	+	5644	1.04784	343.425	256.006	2.87859e-05	chr19_36982439_T_C_b38	66110	chr19	36982439	T	C	1	rs1644662	246	324	0.440217	-1	6.37588e-06	0.114749	0.0249686	0.00639936	0.00772392	0.00785504	0.000237209	0.154909	0.10216	0.193852	ENSG00000198453-chr19:36982439:T:C	chr19:36991870:G:A	0.949	0.578	0.666	0.772	+	+	+	+	-0.075	CD	5644	3280	1264	TRUE	TRUE	6.79125050303944e-05	0.00759985631698912	0.241572532044851	0.750757569229391	108	chr19:36991870:G:A	PP.H4.abf
chr19:40707125:T:C	ENSG00000086544.2	ITPKC	chr19	40717103	40740855	+	7389	1.05805	919.924	263.151	2.46259e-07	chr19_40707125_T_C_b38	-9978	chr19	40707125	T	C	1	rs2604888	245	324	0.440217	-1	3.96927e-08	-0.179009	0.0317443	0.00019998	0.000135644	0.000192393	9.12594e-05	-0.173797	-0.231815	-0.115986	ENSG00000086544-chr19:40707125:T:C	chr19:40712706:G:A	0.859	0.715	0.91	0.991	+	+	+	+	-0.0603	IBD	7389	480	166	TRUE	TRUE	8.4359612540804e-06	5.18404144660837e-05	0.0153380895629004	0.984601607269	4	chr19:40712706:G:A	PP.H4.abf
chr19:48702851:C:G	ENSG00000176920.11	FUT2	chr19	48695971	48705950	+	8797	1.05646	1361.29	268.535	3.36864e-22	chr19_48702851_C_G_b38	6880	chr19	48702851	C	G	1	rs679574	281	361	0.490489	1	1.83896e-24	-0.249689	0.0223359	9.999e-05	4.12364e-20	2.59057e-19	6.13871e-05	-0.704695	-0.800798	-0.540846	ENSG00000176920-chr19:48702851:C:G	chr19:48706594:A:G	0.864	0.5	0.921	1	+	+	+	+	0.1035	CD	8797	1245	531	TRUE	TRUE	1.44092072269766e-08	6.40383458471679e-25	0.0198331324495181	0.980166853141269	6	chr19:48703205:C:T	PP.H4.abf
chr19:48703346:C:T	ENSG00000142233.11	NTN5	chr19	48661407	48673081	-	8826	1.04159	1185.08	262.86	1.34832e-08	chr19_48703346_C_T_b38	30265	chr19	48703346	C	T	1	rs281377	243	296	0.402174	1	1.46435e-09	-0.290509	0.0465246	9.999e-05	9.91244e-06	1.66205e-05	6.74836e-05	-0.603857	-0.758341	-0.439422	ENSG00000142233-chr19:48703346:C:T	chr19:48706594:A:G	0.643	0.342	0.286	NA	-	-	-	NA	0.1035	CD	8826	1245	531	TRUE	TRUE	9.35575787046907e-08	6.64710128469326e-05	0.134273064260948	0.865660371122607	16	chr19:48703205:C:T	PP.H4.abf
chr19:48711838:C:T	ENSG00000105538.9	RASIP1	chr19	48720587	48740721	-	8779	1.05015	1253.69	264.562	1.37036e-07	chr19_48711838_C_T_b38	-28883	chr19	48711838	C	T	1	rs4002471	268	350	0.475543	1	2.23381e-08	0.152024	0.0264486	9.999e-05	0.000108801	0.000156617	6.54328e-05	0.2084	0.136527	0.267413	ENSG00000105538-chr19:48711838:C:T	chr19:48706594:A:G	0.679	NA	0.772	NA	+	NA	+	NA	0.1035	CD	8779	1245	531	TRUE	TRUE	1.90846486751775e-07	0.000328285601106396	0.274942418091395	0.724729105233735	19	chr19:48706594:A:G	PP.H4.abf
chr19:54202060:T:C	ENSG00000170889.13	RPS9	chr19	54200742	54249003	+	12707	1.03024	2844.1	276.319	4.1678e-32	chr19_54202060_T_C_b38	1318	chr19	54202060	T	C	1	rs71365431	218	266	0.361413	1	1.69611e-34	-0.390333	0.0279207	9.999e-05	1.67398e-29	1.87596e-28	2.71729e-05	-0.228577	-0.249713	-0.1967	ENSG00000170889-chr19:54202060:T:C	chr19:54203491:G:A	0.991	0.897	0.979	0.998	+	+	+	+	0.0879	CD	12707	530	238	TRUE	TRUE	1.69738345132642e-07	1.97860487760753e-39	0.0327825417308013	0.967217288530857	33	chr19:54202060:T:C	PP.H4.abf
chr1:1327211:C:T	ENSG00000131584.18	ACAP3	chr1	1292376	1308018	-	6594	1.02067	1087.12	267.982	2.9637e-05	chr1_1327211_C_T_b38	19193	chr1	1327211	C	T	1	rs2296472	92	113	0.153533	-1	1.06104e-05	0.189785	0.0423546	0.0271973	0.0292677	0.0250894	6.90281e-05	0.121908	0.084735	0.171958	ENSG00000131584-chr1:1327211:C:T	chr1:1388944:G:A	0.295	NA	NA	NA	+	NA	NA	NA	-0.0944	IBD	6594	4130	1636	TRUE	TRUE	4.55917322717896e-09	0.0302375784829505	0.0796546470361043	0.890107768210199	13	chr1:1387698:A:G	PP.H4.abf
chr1:1380790:G:A	ENSG00000127054.20	INTS11	chr1	1311678	1324691	-	6658	1.02661	1084.54	267.065	2.76016e-07	chr1_1380790_G_A_b38	56099	chr1	1380790	G	A	1	rs2649587	89	100	0.13587	-1	5.66268e-08	-0.299924	0.053836	0.00019998	0.00023843	0.000325109	7.047e-05	-0.185854	-0.230747	-0.130214	ENSG00000127054-chr1:1380790:G:A	chr1:1388944:G:A	0.333	0.385	NA	NA	+	+	NA	NA	-0.0944	IBD	6658	4130	1636	TRUE	TRUE	1.43366206521559e-08	0.00100581375671673	0.252531826855891	0.746462344993837	9	chr1:1400410:A:G	PP.H4.abf
chr1:1407232:G:C	ENSG00000169972.11	PUSL1	chr1	1308567	1311584	+	6595	1.03684	1020.96	264.431	1.69287e-05	chr1_1407232_G_C_b38	98665	chr1	1407232	G	C	1	rs2275915	128	143	0.194293	1	4.93912e-06	-0.184749	0.0397098	0.0139986	0.0145192	0.0137095	7.72221e-05	-0.161207	-0.209048	-0.113641	ENSG00000169972-chr1:1407232:G:C	chr1:1388944:G:A	0.269	NA	0.459	NA	-	NA	-	NA	-0.0944	IBD	6595	4130	1636	TRUE	TRUE	7.12743139179911e-09	0.101984922407162	0.125144084843356	0.772870979849275	13	chr1:1394423:A:G	PP.H4.abf
chr1:1425013:C:T	ENSG00000162576.16	MXRA8	chr1	1352689	1361777	-	6893	1.02153	1086.35	265.348	9.11193e-07	chr1_1425013_C_T_b38	63236	chr1	1425013	C	T	1	rs2801380	108	141	0.191576	1	1.95287e-07	-0.174053	0.0326621	0.00079992	0.000844656	0.00104876	6.92611e-05	-0.181811	-0.215982	-0.142633	ENSG00000162576-chr1:1425013:C:T	chr1:1388944:G:A	0.226	NA	NA	NA	-	NA	NA	NA	-0.0944	IBD	6893	4130	1636	TRUE	TRUE	3.97571353541429e-09	0.000861378153636376	0.069307217275992	0.9298314005459	13	chr1:1395346:A:G	PP.H4.abf
chr1:1428969:T:C	ENSG00000225285.1	LINC01770	chr1	1430539	1434573	-	7183	1.07007	1080.22	261.026	6.38505e-06	chr1_1428969_T_C_b38	-5604	chr1	1428969	T	C	1	rs1695825	181	230	0.3125	1	1.41522e-06	0.157843	0.0320638	0.0039996	0.00470063	0.00502069	8.04591e-05	0.407492	0.317782	0.497113	ENSG00000225285-chr1:1428969:T:C	chr1:1388944:G:A	0.533	NA	0.647	NA	-	NA	-	NA	-0.0944	IBD	7183	4130	1636	TRUE	TRUE	2.22393489825768e-08	0.0358169244176298	0.392320186099018	0.571862865216613	16	chr1:1387698:A:G	PP.H4.abf
chr1:150849215:A:C	ENSG00000143452.15	HORMAD1	chr1	150698060	150720888	-	4944	1.02374	423.609	260.852	1.34589e-09	chr1_150849215_A_C_b38	128327	chr1	150849215	A	C	1	rs7521592	198	240	0.326087	1	9.18084e-11	0.331165	0.0492737	9.999e-05	4.01162e-07	8.04818e-07	0.000178823	0.914185	0.668482	1.139758	ENSG00000143452-chr1:150849215:A:C	chr1:150706557:G:A	0.825	0.622	0.894	0.799	+	+	+	+	-0.0766	IBD	4944	3647	1185	TRUE	TRUE	5.18525761100206e-09	1.0394919505551e-06	0.464758337927182	0.535240617395596	27	chr1:150706557:G:A	PP.H4.abf
chr1:205507061:G:A	ENSG00000117266.15	CDK18	chr1	205504595	205532793	+	6598	1.06167	894.39	260.837	5.45542e-06	chr1_205507061_G_A_b38	2466	chr1	205507061	G	A	1	rs10494870	220	276	0.375	1	1.17303e-06	-0.163113	0.0328701	0.00209979	0.00341087	0.00376568	9.48561e-05	-0.170137	-0.235906	-0.106828	ENSG00000117266-chr1:205507061:G:A	chr1:205516162:T:A	0.501	0.363	0.492	0.577	+	+	+	+	0.0739	UC	6598	99	54	TRUE	TRUE	0.000182182287135908	0.00227177018891827	0.0115269394403428	0.985986032182226	2	chr1:205514945:G:A	PP.H4.abf
chr1:2540642:T:C	ENSG00000225931.3	RP3-395M20.7	chr1	2566410	2569888	+	8079	1.03583	1436	266.483	2.3477e-06	chr1_2540642_T_C_b38	-25768	chr1	2540642	T	C	1	rs1886731	258	334	0.453804	-1	5.95122e-07	0.231932	0.0454459	0.00259974	0.00270218	0.00305007	5.47369e-05	0.57252	0.43036	0.71694	ENSG00000225931-chr1:2540642:T:C	chr1:2557169:T:C	0.802	0.392	0.695	0.642	+	+	+	+	-0.0936	UC	8079	2452	719	TRUE	TRUE	2.99345618543339e-11	0.00123495131294099	0.0404336430649623	0.958331405591271	7	chr1:2557169:T:C	PP.H4.abf
chr1:93074099:G:T	ENSG00000117500.12	TMED5	chr1	93149742	93163210	-	5879	1.04752	457.622	259.193	7.10422e-09	chr1_93074099_G_T_b38	-89111	chr1	93074099	G	T	1	rs7532549	209	267	0.362772	-1	5.38568e-10	0.148807	0.0231812	9.999e-05	1.7467e-06	3.2198e-06	0.000177855	0.163726	0.132911	0.184005	ENSG00000117500-chr1:93074099:G:T	chr1:93349933:T:C	0.851	0.55	0.685	0.867	+	+	+	+	0.0839	CD	5879	3294	1187	TRUE	TRUE	1.31907506965087e-06	1.0007581259317e-06	0.116296963958694	0.883700716196846	59	chr1:93150645:T:C	PP.H4.abf
chr1:93180861:C:T	ENSG00000122483.17	CCDC18	chr1	93179919	93278730	+	5885	1.03458	512.268	265.421	7.01744e-08	chr1_93180861_C_T_b38	942	chr1	93180861	C	T	1	rs10874763	188	217	0.294837	1	1.11278e-08	0.219219	0.0372964	0.00019998	2.486e-05	3.94254e-05	0.00015285	0.235216	0.176965	0.2885	ENSG00000122483-chr1:93180861:C:T	chr1:93349933:T:C	0.253	NA	NA	NA	+	NA	NA	NA	0.0839	CD	5885	3294	1187	TRUE	TRUE	1.73071363994438e-06	0.00018227865777856	0.152901859808913	0.8469141287678	68	chr1:93349933:T:C	PP.H4.abf
chr1:93346012:A:G	ENSG00000117505.12	DR1	chr1	93346026	93369498	+	5987	1.045	477.258	259.077	4.11737e-07	chr1_93346012_A_G_b38	-14	chr1	93346012	A	G	1	rs10782959	175	211	0.286685	-1	5.59804e-08	-0.201934	0.0362325	9.999e-05	0.000131224	0.000186462	0.000169268	-0.090326	-0.110325	-0.067132	ENSG00000117505-chr1:93346012:A:G	chr1:93349933:T:C	0.654	0.265	0.549	0.86	+	+	+	+	0.0839	CD	5987	3294	1187	TRUE	TRUE	1.06755693606477e-06	9.71292649353461e-05	0.0939309601444593	0.905970841940307	41	chr1:93349933:T:C	PP.H4.abf
chr20:14622075:A:C	ENSG00000125848.9	FLRT3	chr20	14322988	14337616	-	6800	1.06479	624.607	258.989	5.69922e-05	chr20_14622075_A_C_b38	284459	chr20	14622075	A	C	1	rs927811	147	173	0.235054	1	1.57467e-05	0.220955	0.0503293	0.0247975	0.0273635	0.023693	0.000137051	0.482539	0.328722	0.649553	ENSG00000125848-chr20:14622075:A:C	chr20:14618543:C:A	0.809	NA	0.691	0.413	+	NA	+	+	-0.0896	CD	6800	1289	516	TRUE	TRUE	0.000115116367505979	0.036213089834995	0.107355124931763	0.856278145020379	36	chr20:14617088:A:G	PP.H4.abf
chr20:32741898:A:G	ENSG00000149600.11	COMMD7	chr20	32702691	32743997	-	5438	1.04331	598.889	262.176	8.36444e-17	chr20_32741898_A_G_b38	-2099	chr20	32741898	A	G	1	rs6119946	249	339	0.460598	-1	6.83262e-19	-0.400163	0.0420911	9.999e-05	1.30479e-14	5.44876e-14	0.000134217	-0.205915	-0.231597	-0.148617	ENSG00000149600-chr20:32741898:A:G	chr20:32788476:T:G	0.785	NA	0.895	0.905	-	NA	-	-	0.0375	IBD	5438	1169	485	TRUE	TRUE	0.33202960367347	1.29690714384138e-15	0.0900650950141268	0.577905301312394	5	chr20:32741898:A:G	PP.H4.abf
chr20:46120612:T:C	ENSG00000101017.13	CD40	chr20	46118272	46129863	+	7411	1.03177	988.518	266.701	1.03818e-09	chr20_46120612_T_C_b38	2340	chr20	46120612	T	C	1	rs4239702	158	188	0.255435	-1	1.10197e-10	0.185605	0.0277427	9.999e-05	6.53159e-07	1.27559e-06	7.8542e-05	0.231558	0.15894	0.309594	ENSG00000101017-chr20:46120612:T:C	chr20:46118343:T:C	0.852	NA	0.976	0.995	+	NA	+	+	-0.1004	CD	7411	1476	526	TRUE	TRUE	1.85183283428368e-09	8.51208778832123e-07	0.0489875233418746	0.951011623597483	7	chr20:46120612:T:C	PP.H4.abf
chr21:44057219:G:A	ENSG00000237604.1	AP001056.1	chr21	44175489	44176453	+	7457	1.03515	1106.07	263.893	2.55409e-08	chr21_44057219_G_A_b38	-118270	chr21	44057219	G	A	1	rs6518345	206	251	0.341033	1	3.23582e-09	0.439433	0.0720044	9.999e-05	1.92537e-05	3.10668e-05	7.09177e-05	1.426665	1.16888	1.72326	ENSG00000237604-chr21:44057219:G:A	chr21:44057275:A:G	0.557	NA	0.401	0.521	+	NA	+	+	-0.078	IBD	7457	739	233	TRUE	TRUE	4.5541990127106e-05	0.00049262793432243	0.1408021146057	0.858659557096746	3	chr21:44070803:G:A	PP.H4.abf
chr22:21620414:G:C	ENSG00000161180.10	CCDC116	chr22	21632716	21637327	+	7497	1.03934	986.012	265.697	5.36657e-08	chr22_21620414_G_C_b38	-12302	chr22	21620414	G	C	1	rs5754387	119	130	0.17663	1	8.38998e-09	-0.3528	0.0594964	9.999e-05	3.53108e-05	5.46205e-05	8.05624e-05	-0.540571	-0.695863	-0.362058	ENSG00000161180-chr22:21620414:G:C	chr22:21625295:C:T	0.948	0.992	0.992	0.731	+	+	+	+	0.1109	IBD	7497	828	210	TRUE	TRUE	8.64070130042292e-23	0.00022565785540878	0.0934808060768368	0.906293536067752	33	chr22:21622758:C:T	PP.H4.abf
chr22:26671082:G:T	ENSG00000225783.6	MIAT	chr22	26646428	26676475	+	9257	1.03623	1935.03	272.405	8.25235e-12	chr22_26671082_G_T_b38	24654	chr22	26671082	G	T	1	rs4280	248	322	0.4375	1	8.77273e-13	-0.167941	0.0224733	9.999e-05	8.20309e-09	1.99664e-08	4.06701e-05	-0.416641	-0.524449	-0.306119	ENSG00000225783-chr22:26671082:G:T	chr22:26641724:G:C	0.235	NA	0.201	0.234	+	NA	+	+	-0.0534	IBD	9257	581	222	FALSE	TRUE	0.000230579492125728	0.0405986982935276	0.0106649240362188	0.947699673096681	2	chr22:26641724:G:C	PP.H4.abf
chr22:41391946:G:T	ENSG00000100413.16	POLR3H	chr22	41525804	41544606	-	6142	1.03037	384.716	250.608	3.78841e-06	chr22_41391946_G_T_b38	-152660	chr22	41391946	G	T	1	rs5758324	172	214	0.290761	1	4.61571e-07	-0.140812	0.0273127	0.0009999	0.00117884	0.00142699	0.000200937	-0.104006	-0.133644	-0.059642	ENSG00000100413-chr22:41391946:G:T	chr22:41471373:C:T	0.828	0.787	0.761	0.897	-	-	-	-	-0.0214	IBD	6142	6807	2092	TRUE	TRUE	0.0208427671419952	0.00639464760244151	0.445324612996935	0.52713903398974	24	chr22:41386431:G:A	PP.H4.abf
chr2:102357669:C:T	ENSG00000115607.9	IL18RAP	chr2	102418689	102452565	+	6503	1.03207	637.066	262.976	8.87566e-05	chr2_102357669_C_T_b38	-61020	chr2	102357669	C	T	1	rs12999364	209	247	0.335598	1	3.00954e-05	0.153643	0.036253	0.0468953	0.0494269	0.0388494	0.000121979	0.383555	0.230663	0.57107	ENSG00000115607-chr2:102357669:C:T	chr2:102368211:T:A	0.999	0.628	1	0.99	+	+	+	+	-0.0991	IBD	6503	6547	2540	TRUE	TRUE	1.62049730770498e-22	0.0114332869019074	0.0174768345255613	0.971089878572532	8	chr2:102368211:T:A	PP.H4.abf
chr2:181444109:T:C	ENSG00000188452.13	CERKL	chr2	181536676	181657116	-	6979	1.06035	600.418	258.873	1.86172e-05	chr2_181444109_T_C_b38	-213007	chr2	181444109	T	C	1	rs6731125	257	329	0.447011	-1	4.3572e-06	0.131351	0.0280656	0.0069993	0.00825132	0.00832646	0.000140754	0.220883	0.13817	0.314782	ENSG00000188452-chr2:181444109:T:C	chr2:181463487:G:A	0.911	0.619	0.911	0.68	+	+	+	+	-0.082	IBD	6979	207	72	TRUE	TRUE	3.06189381009225e-13	0.00267040741736542	0.0113152322555668	0.986014360326695	9	chr2:181463487:G:A	PP.H4.abf
chr2:233245368:A:AG	ENSG00000085978.21	ATG16L1	chr2	233210051	233295674	+	7939	1.06388	1037.72	260.59	1.46565e-06	chr2_233245368_A_AG_b38	35317	chr2	233245368	A	AG	1	rs35174053	267	354	0.480978	-1	2.59695e-07	0.184305	0.0349596	0.00109989	0.000976047	0.0011999	8.22792e-05	0.085188	0.055538	0.116737	ENSG00000085978-chr2:233245368:A:AG	chr2:233252565:A:T	0.988	0.306	0.975	0.989	+	+	+	+	0.218	CD	7939	2773	902	TRUE	FALSE	1.82972596473927e-58	0.000225593244822912	0.0615722678663101	0.938202138888859	25	chr2:233277353:G:A	PP.H4.abf
chr2:241467764:G:A	ENSG00000115694.14	STK25	chr2	241492674	241509730	-	7367	1.04086	925.099	262.627	3.42586e-12	chr2_241467764_G_A_b38	-41966	chr2	241467764	G	A	1	rs13026988	162	182	0.247283	1	1.22802e-13	0.306032	0.0393554	9.999e-05	1.3995e-09	3.69706e-09	8.62587e-05	0.134886	0.106972	0.167234	ENSG00000115694-chr2:241467764:G:A	chr2:241546197:C:T	NA	NA	0.257	NA	NA	NA	+	NA	-0.083	IBD	7367	237	92	FALSE	FALSE	0.000575358922316992	0.140867035654134	0.0177574505396391	0.836441244615722	6	chr2:241542238:T:G	PP.H4.abf
chr2:43309548:C:T	ENSG00000115970.18	THADA	chr2	43230836	43596046	-	8130	1.04938	845.097	259.062	9.34588e-06	chr2_43309548_C_T_b38	-286498	chr2	43309548	C	T	1	rs139552257	15	15	0.0203804	1	1.99652e-06	-0.559928	0.11546	0.00549945	0.00606134	0.00631013	9.6846e-05	-0.284302	-0.403022	-0.067005	ENSG00000115970-chr2:43309548:C:T	chr2:43582208:G:C	NA	0.311	NA	NA	NA	+	NA	NA	0.1816	CD	8130	3919	1532	TRUE	TRUE	5.73683823409209e-09	0.0111796386708619	0.108059182025268	0.880761172978305	45	chr2:43582355:G:C	PP.H4.abf
chr3:101283895:TA:T	ENSG00000081148.11	IMPG2	chr3	101222546	101320560	-	6821	1.06912	512.9	256.458	2.63099e-05	chr3_101283895_TA_T_b38	-36665	chr3	101283895	TA	T	1	rs55970800	244	314	0.42663	-1	5.85568e-06	-0.265925	0.0576254	0.00859914	0.00965108	0.00957175	0.000168982	-0.343411	-0.496413	-0.13119	ENSG00000081148-chr3:101283895:TA:T	chr3:101304904:A:G	0.552	0.453	0.551	0.458	+	+	+	+	-0.0636	CD	6821	2470	962	TRUE	TRUE	0.0180622627450621	0.0457797260254924	0.405346744919551	0.528773978024768	55	chr3:101415852:C:T	PP.H4.abf
chr3:49664550:G:A	ENSG00000235908.1	RHOA-IT1	chr3	49365145	49367006	-	3204	1.06534	178.09	248.76	3.74709e-05	chr3_49664550_G_A_b38	297544	chr3	49664550	G	A	1	rs9858542	172	202	0.274457	1	6.39499e-06	0.285061	0.0620363	0.00369963	0.0046578	0.00497742	0.000481288	0.429782	0.237728	0.583213	ENSG00000235908-chr3:49664550:G:A	chr3:49676792:T:C	0.999	0.888	1	0.971	+	+	+	+	0.1633	IBD	3204	20531	2812	TRUE	TRUE	4.83582861540537e-51	0.00208573997194077	0.0203233828105541	0.977590877217509	13	chr3:49665051:T:C	PP.H4.abf
chr3:52005208:A:G	ENSG00000162244.10	RPL29	chr3	51993600	51995942	-	4353	1.0489	294.353	256.574	1.15092e-08	chr3_52005208_A_G_b38	9266	chr3	52005208	A	G	1	rs57263506	53	57	0.0774456	1	7.6926e-10	-0.295101	0.0464194	9.999e-05	1.79132e-06	3.29782e-06	0.000277614	-0.154859	-0.193441	-0.113524	ENSG00000162244-chr3:52005208:A:G	chr3:52013158:TGGA:T	0.833	0.406	0.409	0.546	+	+	+	+	0.1353	UC	4353	970	269	TRUE	TRUE	0.000220177375867454	2.61750443455352e-05	0.126072791091219	0.873680811090278	2	chr3:52005208:A:G	PP.H4.abf
chr3:53077688:T:C	ENSG00000242142.1	SERBP1P3	chr3	53064283	53065091	-	5675	1.0365	585.379	263.544	1.01247e-27	chr3_53077688_T_C_b38	12597	chr3	53077688	T	C	1	rs1864367	259	346	0.470109	-1	3.91329e-31	0.572318	0.0438199	9.999e-05	7.61486e-26	6.8843e-25	0.000134539	1.968188	1.717172	2.191888	ENSG00000242142-chr3:53077688:T:C	chr3:53100847:T:C	0.812	0.768	0.681	0.875	+	+	+	+	-0.0965	CD	5675	1452	540	TRUE	TRUE	7.07223493760083e-09	5.23232545494976e-31	0.197298178326835	0.802701814600923	1	chr3:53077688:T:C	PP.H4.abf
chr3:53077688:T:C	ENSG00000163933.9	RFT1	chr3	53088483	53130462	-	5823	1.07114	515.639	251.918	9.09058e-40	chr3_53077688_T_C_b38	-52774	chr3	53077688	T	C	1	rs1864367	259	346	0.470109	-1	9.79818e-47	-0.582051	0.0337334	9.999e-05	1.18246e-39	2.27674e-38	0.000169057	-0.329841	-0.363993	-0.299515	ENSG00000163933-chr3:53077688:T:C	chr3:53100847:T:C	0.812	0.768	0.681	0.875	+	+	+	+	-0.0965	CD	5823	1452	540	TRUE	TRUE	7.06355861277492e-09	2.62473214723288e-58	0.19705490189332	0.802945091043112	1	chr3:53077688:T:C	PP.H4.abf
chr4:73998280:T:C	ENSG00000163735.6	CXCL5	chr4	73995642	73998779	-	6079	1.02818	644.456	269.568	1.26223e-07	chr4_73998280_T_C_b38	-499	chr4	73998280	T	C	1	rs425535	106	119	0.161685	-1	2.75359e-08	-0.469057	0.0821683	9.999e-05	6.16315e-05	9.19469e-05	0.00011916	-1.432648	-1.95938	-0.972746	ENSG00000163735-chr4:73998280:T:C	chr4:73991991:A:G	0.6	NA	0.271	NA	+	NA	+	NA	0.0633	UC	6079	734	246	TRUE	TRUE	0.000135064499706939	0.0007529848347614	0.0322335800012151	0.966875307407532	14	chr4:73998280:T:C	PP.H4.abf
chr5:132341354:G:T	ENSG00000197208.5	SLC22A4	chr5	132294443	132344206	+	5462	1.04137	488.374	262.496	2.83671e-06	chr5_132341354_G_T_b38	46911	chr5	132341354	G	T	1	rs11242109	264	338	0.459239	1	6.05427e-07	-0.196605	0.0385503	0.00119988	0.00103559	0.00126551	0.000163635	-0.410764	-0.517382	-0.326534	ENSG00000197208-chr5:132341354:G:T	chr5:132435113:C:T	0.713	NA	0.78	0.833	+	NA	+	+	0.1254	IBD	5462	21449	3168	TRUE	TRUE	3.14410756184644e-27	0.0042669123442744	0.138625693128124	0.857107394527602	17	chr5:132475490:G:A	PP.H4.abf
chr5:150816362:G:C	ENSG00000086589.11	RBM22	chr5	150690794	150701107	-	7964	1.02974	1021.76	264.038	1.13735e-06	chr5_150816362_G_C_b38	115255	chr5	150816362	G	C	1	rs73282234	60	60	0.0815217	1	2.33721e-07	-0.301427	0.0569478	0.00119988	0.000937871	0.00115578	7.55188e-05	-0.12144	-0.169333	-0.084832	ENSG00000086589-chr5:150816362:G:C	chr5:150860514:C:T	0.985	0.342	0.905	0.911	+	+	+	+	0.1561	IBD	7964	7493	2872	TRUE	TRUE	3.29215878719774e-28	0.000685440383430896	0.0928498871084615	0.906464672508103	30	chr5:150860514:C:T	PP.H4.abf
chr5:172150685:T:C	ENSG00000072786.12	STK10	chr5	172042073	172188386	-	7351	1.0441	1123.77	262.336	6.49242e-05	chr5_172150685_T_C_b38	-37701	chr5	172150685	T	C	1	rs4868145	214	273	0.373973	1	2.06733e-05	-0.111298	0.025723	0.0587941	0.0614493	0.0462019	7.17002e-05	-0.114018	-0.14634	-0.067681	ENSG00000072786-chr5:172150685:T:C	chr5:172151212:C:T	0.922	NA	0.654	0.394	+	NA	+	+	0.0522	IBD	7351	45	26	TRUE	TRUE	0.000309936490210133	0.030488067962738	0.0153922922307535	0.95323160224874	7	chr5:172153009:T:A	PP.H4.abf
chr5:177365490:A:G	ENSG00000169220.17	RGS14	chr5	177357837	177372601	+	6813	1.05476	919.209	260.459	6.06458e-25	chr5_177365490_A_G_b38	7653	chr5	177365490	A	G	1	rs6556313	222	271	0.368207	1	2.61872e-28	-0.403911	0.0329046	9.999e-05	3.73109e-23	2.86205e-22	9.04575e-05	-0.43771	-0.535368	-0.346203	ENSG00000169220-chr5:177365490:A:G	chr5:177372991:T:C	0.817	0.719	0.949	0.988	+	+	+	+	0.0753	IBD	6813	425	123	TRUE	TRUE	2.09682769014692e-10	1.11472119126408e-29	0.00874863609249112	0.991251363697825	2	chr5:177372991:T:C	PP.H4.abf
chr5:40385032:C:T	ENSG00000283286.1	RP11-386E5.1	chr5	40415137	40431491	+	8072	1.00081	444.783	251.307	0.000155032	chr5_40385032_C_T_b38	-30105	chr5	40385032	C	T	1	rs10473187	234	286	0.388587	-1	3.78911e-05	-0.176946	0.0423019	0.0665933	0.0664684	0.0491639	0.000158483	-0.856456	-1.16418	-0.602889	ENSG00000283286-chr5:40385032:C:T	chr5:40487168:C:T	NA	0.228	NA	NA	NA	+	NA	NA	0.126	IBD	8072	12871	5081	TRUE	TRUE	3.71395435052671e-46	0.019036033102577	0.0753016490772504	0.905662317820172	12	chr5:40410482:T:C	PP.H4.abf
chr5:439740:C:T	ENSG00000225138.7	CTD-2228K2.7	chr5	473236	480665	+	7561	1.05809	983.645	259.513	6.53877e-40	chr5_439740_C_T_b38	-33496	chr5	439740	C	T	1	rs115689223	113	125	0.169837	1	1.3979e-45	0.868451	0.0512436	9.999e-05	4.95281e-39	9.18689e-38	8.5358e-05	1.708056	1.568154	1.865798	ENSG00000225138-chr5:439740:C:T	chr5:573904:G:A	NA	0.321	NA	NA	NA	+	NA	NA	-0.1108	UC	7561	2677	1088	FALSE	FALSE	0.000165422493269604	4.90837553121882e-08	0.116264608056104	0.883569920297561	6	chr5:541908:A:G	PP.H4.abf
chr5:96916728:G:A	ENSG00000164308.16	ERAP2	chr5	96875939	96919716	+	7858	1.05795	589.892	258.887	3.91478e-117	chr5_96916728_G_A_b38	40789	chr5	96916728	G	A	1	rs2927608	246	322	0.4375	1	1.47298e-134	1.05283	0.0234704	9.999e-05	5.85213e-121	7.19533e-118	0.00014227	2.662615	2.579266	2.747791	ENSG00000164308-chr5:96916728:G:A	chr5:96912106:T:C	0.931	0.732	0.508	0.576	-	-	-	-	-0.1115	CD	7858	1505	648	TRUE	TRUE	9.50557490892427e-11	0	0.333842122625798	0.666157877279151	1	chr5:96916728:G:A	PP.H4.abf
chr5:96939450:G:A	ENSG00000113441.15	LNPEP	chr5	96935810	97037515	+	8166	1.032	649.015	264.984	3.03043e-06	chr5_96939450_G_A_b38	3640	chr5	96939450	G	A	1	rs2617439	232	295	0.400815	1	7.3615e-07	0.125137	0.0247327	0.00069993	0.00158752	0.00187914	0.000119708	0.083722	0.059364	0.114214	ENSG00000113441-chr5:96939450:G:A	chr5:96912106:T:C	0.975	0.9	0.97	0.974	-	-	-	-	-0.1115	CD	8166	1505	648	TRUE	TRUE	2.45991956002759e-11	0.000732021174895368	0.0856527913776618	0.913615187422635	31	chr5:96912106:T:C	PP.H4.abf
chr6:117488062:A:G	ENSG00000164465.18	DCBLD1	chr6	117453817	117569858	+	7500	1.04297	557.78	258.466	9.76063e-08	chr6_117488062_A_G_b38	34245	chr6	117488062	A	G	1	rs2105907	255	324	0.440217	1	1.0339e-08	0.167435	0.0284206	9.999e-05	3.5041e-05	5.42616e-05	0.000143962	0.268079	0.2198	0.334975	ENSG00000164465-chr6:117488062:A:G	chr6:117522909:A:G	0.283	NA	0.277	0.511	+	NA	+	+	0.058	IBD	7500	229	96	FALSE	TRUE	1.04348854281674e-05	0.0594624020519098	0.00697240223903008	0.933476277028132	5	chr6:117522909:A:G	PP.H4.abf
chr6:166950460:G:A	ENSG00000026297.15	RNASET2	chr6	166929504	166957184	-	10045	1.03814	1299.9	263.165	2.12175e-07	chr6_166950460_G_A_b38	-6724	chr6	166950460	G	A	1	rs3798307	132	142	0.192935	1	3.35802e-08	0.170386	0.0300456	9.999e-05	0.000198426	0.000273684	6.08899e-05	0.278294	0.217032	0.369739	ENSG00000026297-chr6:166950460:G:A	chr6:166965500:C:T	0.253	NA	0.205	0.385	+	NA	+	+	-0.104	IBD	10045	1972	913	TRUE	TRUE	1.31518691734718e-21	0.00140695051139715	0.42647685882888	0.572116190659725	18	chr6:167004063:G:T	PP.H4.abf
chr6:44301833:C:T	ENSG00000146221.9	TCTE1	chr6	44279445	44297688	-	7629	1.01819	1076.14	271.241	3.31618e-07	chr6_44301833_C_T_b38	4145	chr6	44301833	C	T	1	rs2236500	36	37	0.0502717	1	8.7548e-08	0.680842	0.124088	0.00039996	0.000306422	0.000410854	6.9198e-05	1.210094	0.964009	1.437446	ENSG00000146221-chr6:44301833:C:T	chr6:44277504:G:C	NA	NA	NA	0.808	NA	NA	NA	+	-0.0868	CD	7629	429	193	TRUE	TRUE	0.0013446262174838	0.00623103242894526	0.0370406193330332	0.955163213084952	2	chr6:44277504:G:C	PP.H4.abf
chr7:100688351:A:C	ENSG00000146830.9	GIGYF1	chr7	100679507	100689448	-	6684	1.04753	694.532	260.663	2.41872e-15	chr7_100688351_A_C_b38	-1097	chr7	100688351	A	C	1	rs221797	62	68	0.0923913	-1	2.52159e-17	-0.407438	0.0452165	9.999e-05	4.53557e-13	1.65829e-12	0.000117196	-0.22203	-0.259468	-0.167134	ENSG00000146830-chr7:100688351:A:C	chr7:100717894:A:G	0.605	NA	0.492	0.962	+	NA	+	+	-0.0937	CD	6684	1627	533	TRUE	TRUE	0.00487548380652281	1.58916543745085e-13	0.0964014107479906	0.898723105445321	6	chr7:100688351:A:C	PP.H4.abf
chr7:128935743:TCTTAGCTATTGCTC:T	ENSG00000128604.19	IRF5	chr7	128937612	128950035	+	6799	1.03313	753.288	264.49	1.62447e-31	chr7_128935743_TCTTAGCTATTGCTC_T_b38	-1869	chr7	128935743	TCTTAGCTATTGCTC	T	1	rs113478424	240	302	0.410326	1	2.66332e-35	0.383259	0.0269941	9.999e-05	1.43458e-29	1.61609e-28	0.000103493	0.533554	0.474114	0.591592	ENSG00000128604-chr7:128935743:TCTTAGCTATTGCTC:T	chr7:128936032:T:C	0.998	0.996	1	0.989	+	+	+	+	0.1038	UC	6799	1095	394	TRUE	TRUE	3.82887932832054e-14	2.78848728309074e-41	0.00147915723070785	0.99852084276926	2	chr7:128936032:T:C	PP.H4.abf
chr7:2738191:A:G	ENSG00000146535.13	GNA12	chr7	2728112	2844324	-	10686	1.04848	1220.92	263.122	2.83483e-11	chr7_2738191_A_G_b38	-106133	chr7	2738191	A	G	1	rs798518	178	212	0.288043	1	1.41034e-12	0.171409	0.023168	9.999e-05	1.47328e-08	3.47779e-08	6.68585e-05	0.191816	0.141459	0.230093	ENSG00000146535-chr7:2738191:A:G	chr7:2783352:T:A	0.884	0.334	0.749	0.852	+	+	+	+	-0.1064	UC	10686	2027	729	TRUE	TRUE	1.43434638136253e-12	9.63886480812942e-09	0.0792905660834538	0.920709424276245	21	chr7:2738191:A:G	PP.H4.abf
chr7:37414914:G:T	ENSG00000155849.15	ELMO1	chr7	36854361	37449249	-	8499	1.02397	1093.67	266.789	6.85311e-12	chr7_37414914_G_T_b38	-34335	chr7	37414914	G	T	1	rs2052681	121	133	0.180707	1	4.11869e-13	0.315815	0.041607	9.999e-05	4.73756e-09	1.18393e-08	6.93173e-05	0.305947	0.241928	0.422396	ENSG00000155849-chr7:37414914:G:T	chr7:37417880:A:G	0.642	NA	0.847	0.996	+	NA	+	+	0.1341	CD	8499	275	157	TRUE	TRUE	2.46522875612979e-07	1.63197627089087e-09	0.381852408434643	0.618147343410502	32	chr7:37414914:G:T	PP.H4.abf
chr8:27331696:AG:A	ENSG00000120899.17	PTK2B	chr8	27311482	27459391	+	9125	1.04923	810.799	255.846	5.86832e-05	chr8_27331696_AG_A_b38	20214	chr8	27331696	AG	A	1	rs5890366	270	357	0.485054	-1	1.44418e-05	0.0845432	0.01917	0.0350965	0.0391221	0.0320555	0.000100898	0.105328	0.058302	0.157962	ENSG00000120899-chr8:27331696:AG:A	chr8:27370037:A:G	0.264	0.35	0.497	0.837	+	+	+	+	-0.0631	CD	9125	307	79	FALSE	TRUE	0.0115775611740396	0.222459385055914	0.0127680289430439	0.559952168488046	10	chr8:27350609:G:A	PP.H4.abf
chr8:73088116:A:G	ENSG00000237061.1	RP11-956J14.1	chr8	73083787	73085879	-	7462	1.0374	724.796	258.698	3.05372e-08	chr8_73088116_A_G_b38	2237	chr8	73088116	A	G	1	rs10107882	197	233	0.316576	1	2.76619e-09	0.330474	0.0539021	9.999e-05	1.45844e-05	2.39228e-05	0.000108957	0.945508	0.75583	1.203879	ENSG00000237061-chr8:73088116:A:G	chr8:73095112:G:T	0.285	0.568	NA	NA	+	+	NA	NA	0.0264	IBD	7462	148	80	TRUE	TRUE	0.172607038647168	7.48404471399204e-06	0.0174458539436606	0.809868862058048	15	chr8:73090455:A:G	PP.H4.abf
chr9:217269:A:G	ENSG00000183784.6	C9orf66	chr9	212824	215741	-	7878	1.04567	1027.55	261.434	2.94283e-06	chr9_217269_A_G_b38	1528	chr9	217269	A	G	1	rs598791	233	294	0.399457	1	5.98873e-07	-0.289298	0.0567007	0.00129987	0.0022708	0.00260245	7.87807e-05	-0.685032	-0.918873	-0.386524	ENSG00000183784-chr9:217269:A:G	chr9:271455:T:C	0.421	NA	0.214	NA	+	NA	+	NA	-0.0797	CD	7878	632	344	TRUE	TRUE	0.000319092589769905	0.00319756357922347	0.0494518573676073	0.947011241587441	14	chr9:271455:T:C	PP.H4.abf
chr9:92678346:A:C	ENSG00000185963.13	BICD2	chr9	92711363	92764812	-	7626	1.03962	566.624	258.48	8.35919e-06	chr9_92678346_A_C_b38	-86466	chr9	92678346	A	C	1	rs10992404	148	170	0.230978	1	1.71072e-06	0.102116	0.0209146	0.00359964	0.00375688	0.0041075	0.000140302	0.077127	0.046298	0.112384	ENSG00000185963-chr9:92678346:A:C	chr9:92674850:A:G	0.74	0.265	0.758	0.99	+	+	+	+	0.0828	IBD	7626	3274	1272	TRUE	TRUE	7.08671737589109e-08	0.0204789967020713	0.421753050530869	0.557767878463345	45	chr9:92682518:A:G	PP.H4.abf