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["Supplementary Data 1 | High-confidence mtDNA variants detected in POLGD274A knock-in HEK cells"]
["position","nucleotide","variant","vmr","mean","variance","n_cells_conf_detected","n_cells_over_5","n_cells_over_10","n_cells_over_20","strand_correlation","mean_coverage","condition","Consequence","SYMBOL","BIOTYPE","Protein_position","Amino_acids","MLC_pos_score","SIFT","PolyPhen","effect","SIFT_score","PolyPhen_score","rank","label"]
[4429,"G>A","4429G>A",0.0601722128503596,0.3836408,0.0230845,1129,1198,1180,1063,0.97311132600862,57.2622549019608,"CTRL","non_coding_transcript_exon_variant","MT-TM","Mt_tRNA","-","-",0.94514,"-","-","non-coding","NA","NA",1,"NA"]
[15259,"C>T","15259C>T",0.0925675111584472,0.2718883,0.025168,1032,1162,1082,783,0.960367644636477,58.1625816993464,"CTRL","synonymous_variant","MT-CYB","protein_coding",171,"D",0.35778,"-","-","synonymous","NA","NA",2,"NA"]
[7211,"G>A","7211G>A",0.099930960034666,0.2378483,0.0237684,946,1051,947,706,0.967403858488358,58.1397058823529,"CTRL","synonymous_variant","MT-CO1","protein_coding",436,"M",0.99372,"-","-","synonymous","NA","NA",3,"NA"]
[2149,"G>A","2149G>A",0.0956949708004717,0.2212208,0.0211697,755,997,893,642,0.918507096019878,37.7990196078431,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.44686,"-","-","non-coding","NA","NA",4,"NA"]
[12700,"C>T","12700C>T",0.113603241453474,0.1002473,0.0113884,430,669,478,207,0.927719680160024,43.9354575163399,"CTRL","missense_variant","MT-ND5","protein_coding",122,"L/F",0.79021,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,5,"12700C>T"]
[12191,"C>T","12191C>T",0.101876313129894,0.0261455,0.0026636,144,291,124,28,0.976462552634917,55.0588235294118,"CTRL","non_coding_transcript_exon_variant","MT-TH","Mt_tRNA","-","-",0.20689,"-","-","non-coding","NA","NA",6,"NA"]
[9752,"C>T","9752C>T",0.103096257251219,0.0253743,0.002616,148,288,128,29,0.957267047147262,55.0580065359477,"CTRL","synonymous_variant","MT-CO3","protein_coding",182,"F",0.24093,"-","-","synonymous","NA","NA",7,"NA"]
[15386,"C>T","15386C>T",0.124038891116218,0.0190314,2.3606E-3,102,224,84,20,0.922830713809915,57.2238562091503,"CTRL","missense_variant","MT-CYB","protein_coding",214,"H/Y",0.11509,"deleterious_low_confidence(0)","benign(0.339)","missense",0,0.339,8,"15386C>T"]
[4856,"T>C","4856T>C",0.0919359375908837,0.0190014,1.7469E-3,127,220,82,13,0.97030803572857,63.0759803921569,"CTRL","synonymous_variant","MT-ND2","protein_coding",129,"L",0.8015,"-","-","synonymous","NA","NA",9,"NA"]
[7216,"G>A","7216G>A",0.103718199762165,0.0189065,0.0019609,95,214,88,18,0.980606506698622,55.9599673202614,"CTRL","missense_variant","MT-CO1","protein_coding",438,"R/Q",0.99167,"deleterious_low_confidence(0)","probably_damaging(0.993)","missense",0,0.993,10,"7216G>A"]
[11013,"C>T","11013C>T",0.0924058357805879,0.0186737,0.0017256,124,218,86,13,0.951940242698691,66.6764705882353,"CTRL","missense_variant","MT-ND4","protein_coding",85,"S/F",0.48542,"tolerated_low_confidence(0.38)","benign(0.123)","missense",0.38,0.123,11,"11013C>T"]
[6261,"G>A","6261G>A",0.0970098012673791,0.0184338,1.7883E-3,123,201,75,17,0.965789951722466,61.0735294117647,"CTRL","missense_variant","MT-CO1","protein_coding",120,"A/T",0.36511,"tolerated_low_confidence(0.23)","probably_damaging(0.992)","missense",0.23,0.992,12,"6261G>A"]
[541,"C>T","541C>T",0.0831018768492949,0.0180418,0.0014993,151,198,63,10,0.966478003778556,72.0457516339869,"CTRL","intergenic_variant","-","-","-","-",0.088,"-","-","non-coding","NA","NA",13,"NA"]
[11632,"C>T","11632C>T",0.110656854300752,0.0167107,0.0018492,71,195,66,18,0.948041502269256,53.1437908496732,"CTRL","synonymous_variant","MT-ND4","protein_coding",291,"I",0.96777,"-","-","synonymous","NA","NA",14,"NA"]
[1415,"G>A","1415G>A",0.106189030660466,0.0165003,1.7522E-3,58,197,78,19,0.967006036796656,52.6331699346405,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.64102,"-","-","non-coding","NA","NA",15,"NA"]
[4235,"C>A","4235C>A",0.108723943103577,0.0162129,0.0017627,56,167,71,14,0.984063203024467,46.2091503267974,"CTRL","missense_variant","MT-ND1","protein_coding",310,"T/K",0.14443,"tolerated_low_confidence(0.05)","benign(0.029)","missense",0.05,0.029,16,"4235C>A"]
[12775,"G>A","12775G>A",0.0821468003050473,0.0157299,0.0012922,63,153,60,10,0.98710391248906,56.7173202614379,"CTRL","missense_variant","MT-ND5","protein_coding",147,"V/M",0.83855,"deleterious_low_confidence(0.03)","probably_damaging(0.998)","missense",0.03,0.998,17,"12775G>A"]
[5486,"C>A","5486C>A",0.0984879254235799,0.015625,0.0015389,30,180,86,33,0.914073794279504,32.2091503267974,"CTRL","missense_variant","MT-ND2","protein_coding",339,"I/M",0.20599,"tolerated(0.13)","possibly_damaging(0.452)","missense",0.13,0.452,18,"5486C>A"]
[13618,"C>T","13618C>T",0.100139452445311,0.0153255,1.5347E-3,64,168,59,12,0.965048224032241,58.4272875816993,"CTRL","missense_variant","MT-ND5","protein_coding",428,"L/F",0.47616,"tolerated_low_confidence(1)","probably_damaging(0.998)","missense",1,0.998,19,"13618C>T"]
[7829,"C>T","7829C>T",0.0930087226492364,0.0151605,0.0014101,82,164,52,12,0.967103159752024,63.4820261437908,"CTRL","missense_variant","MT-CO2","protein_coding",82,"R/C",0.75391,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,20,"7829C>T"]
[15068,"C>T","15068C>T",0.0903899879961527,0.014705,1.3292E-3,79,164,59,10,0.969510619081546,56.281045751634,"CTRL","missense_variant","MT-CYB","protein_coding",108,"L/F",0.28828,"deleterious_low_confidence(0.02)","possibly_damaging(0.836)","missense",0.02,0.836,21,"15068C>T"]
[2396,"C>T","2396C>T",0.0960797750983316,0.0144955,1.3927E-3,54,158,58,15,0.945536169833884,46.9493464052288,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.14606,"-","-","non-coding","NA","NA",22,"NA"]
[9138,"C>T","9138C>T",0.0894160237319766,0.0144151,0.0012889,71,160,48,4,0.969229979167231,59.906862745098,"CTRL","synonymous_variant","MT-ATP6","protein_coding",204,"I",0.06615,"-","-","synonymous","NA","NA",23,"NA"]
[15650,"G>A","15650G>A",0.0908023666254801,0.0143738,0.0013052,36,161,64,15,0.929697288616066,45.5849673202614,"CTRL","missense_variant","MT-CYB","protein_coding",302,"A/T",0.02149,"tolerated_low_confidence(0.36)","benign(0)","missense",0.36,0,24,"15650G>A"]
[2215,"C>T","2215C>T",0.0908582516756514,0.0139561,1.268E-3,70,154,60,13,0.970825450065051,57.2524509803922,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.30189,"-","-","non-coding","NA","NA",25,"NA"]
[4107,"C>T","4107C>T",0.0928053121479406,0.0136472,1.2665E-3,61,148,57,9,0.96471198972149,56.812091503268,"CTRL","synonymous_variant","MT-ND1","protein_coding",267,"T",0.38955,"-","-","synonymous","NA","NA",26,"NA"]
[15111,"C>T","15111C>T",0.103957580069025,0.0135249,0.001406,56,146,64,12,0.95532956946907,55.9967320261438,"CTRL","missense_variant","MT-CYB","protein_coding",122,"A/V",0.23722,"tolerated_low_confidence(0.19)","benign(0.306)","missense",0.19,0.306,27,"15111C>T"]
[3004,"C>T","3004C>T",0.0921145819492231,0.0126795,1.168E-3,69,148,55,12,0.887476371331773,63.2745098039216,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.87555,"-","-","non-coding","NA","NA",28,"NA"]
[324,"C>T","324C>T",0.091253048201427,0.0122198,0.0011151,19,125,54,16,0.94971582662792,40.7834967320261,"CTRL","intergenic_variant","-","-","-","-",0.06542,"-","-","non-coding","NA","NA",29,"NA"]
[6848,"C>T","6848C>T",0.0911207250798794,0.0117831,0.0010737,52,127,36,10,0.986219545024716,64.6209150326797,"CTRL","synonymous_variant","MT-CO1","protein_coding",315,"P",0.88907,"-","-","synonymous","NA","NA",30,"NA"]
[11215,"C>T","11215C>T",0.0937525670488208,0.0104338,0.0009782,38,127,47,7,0.964843715570964,58.1004901960784,"CTRL","synonymous_variant","MT-ND4","protein_coding",152,"Y",0.90561,"-","-","synonymous","NA","NA",31,"NA"]
[10933,"C>A","10933C>A",0.0980710375920795,0.0103793,1.0179E-3,42,112,43,7,0.982956082201614,61.2393790849673,"CTRL","synonymous_variant","MT-ND4","protein_coding",58,"S",0.566,"-","-","synonymous","NA","NA",32,"NA"]
[4831,"G>A","4831G>A",0.095189196233867,0.0096999,0.0009233,29,106,38,4,0.974879615972884,58.453431372549,"CTRL","missense_variant","MT-ND2","protein_coding",121,"G/D",0.44798,"deleterious(0)","probably_damaging(1)","missense",0,1,33,"NA"]
[10285,"C>T","10285C>T",0.0836639650836642,0.0096213,0.000805,29,112,39,7,0.925491488588547,54.0057189542484,"CTRL","missense_variant","MT-ND3","protein_coding",76,"P/L",0.98443,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,34,"NA"]
[7663,"C>T","7663C>T",0.0486208274951319,0.0095354,0.0004636,11,72,20,4,0.748523970473972,52.9501633986928,"CTRL","synonymous_variant","MT-CO2","protein_coding",26,"H",0.14358,"-","-","synonymous","NA","NA",35,"NA"]
[8740,"C>T","8740C>T",0.105269987917548,0.0091459,0.0009628,32,97,30,8,0.987133990794067,57.7957516339869,"CTRL","synonymous_variant","MT-ATP6","protein_coding",72,"L",0.13447,"-","-","synonymous","NA","NA",36,"NA"]
[14997,"C>T","14997C>T",0.084634243949854,0.0087473,0.0007403,32,95,32,6,0.894643643660811,60.6160130718954,"CTRL","missense_variant","MT-CYB","protein_coding",84,"A/V",0.41686,"deleterious_low_confidence(0)","benign(0.045)","missense",0,0.045,37,"NA"]
[9497,"T>A","9497T>A",0.126847703012499,0.0085515,0.0010847,36,97,34,8,0.887952606072378,54.3611111111111,"CTRL","missense_variant","MT-CO3","protein_coding",97,"F/L",0.37084,"deleterious_low_confidence(0.01)","probably_damaging(0.979)","missense",0.01,0.979,38,"NA"]
[9314,"C>T","9314C>T",0.0599495955901973,0.0085012,0.0005096,23,75,17,1,0.919176636245371,68.0408496732026,"CTRL","synonymous_variant","MT-CO3","protein_coding",36,"H",0.08537,"-","-","synonymous","NA","NA",39,"NA"]
[15687,"G>A","15687G>A",0.0959543543696903,0.008346,0.0008008,28,95,25,5,0.905966907300525,54.8186274509804,"CTRL","missense_variant","MT-CYB","protein_coding",314,"S/N",0.2862,"deleterious_low_confidence(0.01)","probably_damaging(0.985)","missense",0.01,0.985,40,"NA"]
[10914,"G>A","10914G>A",0.0972356055156542,8.2746E-3,0.0008046,34,99,37,5,0.9096563336888,60.031045751634,"CTRL","missense_variant","MT-ND4","protein_coding",52,"C/Y",0.28475,"tolerated_low_confidence(0.48)","benign(0)","missense",0.48,0,41,"NA"]
[1321,"A>G","1321A>G",0.0852107442183976,0.0082569,0.0007036,19,95,30,4,0.836654721281352,56.0040849673203,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.72032,"-","-","non-coding","NA","NA",42,"NA"]
[4202,"C>T","4202C>T",0.0921843055507842,0.0081529,0.0007516,16,83,23,6,0.971466931019828,48.7017973856209,"CTRL","missense_variant","MT-ND1","protein_coding",299,"A/V",0.58118,"deleterious_low_confidence(0.03)","possibly_damaging(0.738)","missense",0.03,0.738,43,"NA"]
[5377,"C>T","5377C>T",0.0725338421574385,0.0079429,0.0005761,18,76,23,4,0.980573478803141,54.5147058823529,"CTRL","missense_variant","MT-ND2","protein_coding",303,"T/M",0.97655,"deleterious(0)","probably_damaging(0.99)","missense",0,0.99,44,"NA"]
[7978,"C>T","7978C>T",0.0908327580218142,0.0079055,0.0007181,33,87,27,3,0.971961384000165,63.5571895424837,"CTRL","synonymous_variant","MT-CO2","protein_coding",131,"G",0.46961,"-","-","synonymous","NA","NA",45,"NA"]
[1147,"G>A","1147G>A",0.0832959543183541,0.0077333,0.0006441,28,81,22,4,0.92634780468559,64.4444444444444,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.93503,"-","-","non-coding","NA","NA",46,"NA"]
[4440,"G>A","4440G>A",0.0842776345247343,0.0077208,0.0006507,18,95,22,2,0.775495281403824,51.8504901960784,"CTRL","non_coding_transcript_exon_variant","MT-TM","Mt_tRNA","-","-",0.83198,"-","-","non-coding","NA","NA",47,"NA"]
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[6236,"C>T","6236C>T",0.095108254150283,0.0074786,7.113E-4,33,88,24,4,0.932558006430855,63.7990196078431,"CTRL","synonymous_variant","MT-CO1","protein_coding",111,"L",0.47459,"-","-","synonymous","NA","NA",49,"NA"]
[11509,"C>T","11509C>T",0.106290749485984,0.0072869,0.0007745,26,89,30,5,0.885798342365462,58.0767973856209,"CTRL","synonymous_variant","MT-ND4","protein_coding",250,"L",0.85865,"-","-","synonymous","NA","NA",50,"NA"]
[9818,"C>A","9818C>A",0.0949377374286508,0.0071542,0.0006792,18,81,29,2,0.947396558548012,58.812091503268,"CTRL","missense_variant","MT-CO3","protein_coding",204,"H/Q",0.40853,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,51,"NA"]
[6836,"C>A","6836C>A",0.0567415594844114,0.0070789,0.0004017,49,62,19,1,0.927583608903481,64.2843137254902,"CTRL","missense_variant","MT-CO1","protein_coding",311,"I/M",0.94143,"deleterious_low_confidence(0.01)","probably_damaging(0.99)","missense",0.01,0.99,52,"NA"]
[13911,"A>T","13911A>T",0.0901586683592537,0.0070736,6.378E-4,17,82,24,4,0.876680303636727,54.9771241830065,"CTRL","missense_variant","MT-ND5","protein_coding",525,"M/I",0.22032,"deleterious_low_confidence(0.01)","probably_damaging(0.924)","missense",0.01,0.924,53,"NA"]
[12813,"C>T","12813C>T",0.0949271675315556,0.0070623,0.0006704,26,78,23,5,0.950948652522631,59.8088235294118,"CTRL","synonymous_variant","MT-ND5","protein_coding",159,"Y",0.6303,"-","-","synonymous","NA","NA",54,"NA"]
[11789,"C>T","11789C>T",0.0769431555853701,0.0070007,0.0005387,18,85,17,0,0.970606303232643,59.7516339869281,"CTRL","missense_variant","MT-ND4","protein_coding",344,"L/F",0.80219,"deleterious_low_confidence(0.03)","probably_damaging(0.997)","missense",0.03,0.997,55,"NA"]
[437,"C>T","437C>T",0.0855312154149769,0.0069271,0.0005925,18,77,26,4,0.894135763076386,57.0841503267974,"CTRL","intergenic_variant","-","-","-","-",0.18885,"-","-","non-coding","NA","NA",56,"NA"]
[6925,"C>T","6925C>T",0.0373213466660001,0.0069069,0.0002578,11,43,8,1,0.75863482254699,69.1977124183007,"CTRL","missense_variant","MT-CO1","protein_coding",341,"A/V",0.47191,"tolerated_low_confidence(0.06)","probably_damaging(0.993)","missense",0.06,0.993,57,"NA"]
[14902,"C>T","14902C>T",0.075394011946506,0.0065971,0.0004974,44,56,22,3,0.860623441732303,57.2148692810458,"CTRL","synonymous_variant","MT-CYB","protein_coding",52,"A",0.26948,"-","-","synonymous","NA","NA",58,"NA"]
[11043,"A>T","11043A>T",0.104642158520707,0.006531,0.0006834,10,63,23,6,0.975885165354158,50.2883986928105,"CTRL","missense_variant","MT-ND4","protein_coding",95,"Y/F",0.73725,"tolerated_low_confidence(0.13)","probably_damaging(0.988)","missense",0.13,0.988,59,"NA"]
[8984,"C>T","8984C>T",0.133574768900664,0.0064844,0.0008661,37,69,21,3,0.825089243217098,69.1707516339869,"CTRL","missense_variant","MT-ATP6","protein_coding",153,"P/L",0.04466,"deleterious(0)","probably_damaging(0.998)","missense",0,0.998,60,"NA"]
[14433,"C>T","14433C>T",0.077403387222659,0.0064308,0.0004978,24,79,15,2,0.937877457620982,64.9191176470588,"CTRL","missense_variant","MT-ND6","protein_coding",81,"A/T",0.61887,"tolerated(1)","benign(0.015)","missense",1,0.015,61,"NA"]
[6563,"C>T","6563C>T",0.0589711856997657,0.0059694,0.000352,15,50,10,0,0.985025512449175,71.4428104575163,"CTRL","synonymous_variant","MT-CO1","protein_coding",220,"F",0.95286,"-","-","synonymous","NA","NA",62,"NA"]
[5014,"C>T","5014C>T",0.0861366677075113,0.0059256,0.0005104,15,69,17,0,0.959195065830226,48.1184640522876,"CTRL","missense_variant","MT-ND2","protein_coding",182,"S/F",0.84504,"deleterious(0)","probably_damaging(0.987)","missense",0,0.987,63,"NA"]
[7244,"C>T","7244C>T",0.093794925131085,0.0056447,0.0005294,30,56,19,3,0.703584838573809,48.6315359477124,"CTRL","synonymous_variant","MT-CO1","protein_coding",447,"Y",0.68076,"-","-","synonymous","NA","NA",64,"NA"]
[10095,"C>T","10095C>T",0.0854360925759338,0.0055998,0.0004784,5,67,24,2,0.838991243244043,42.7475490196078,"CTRL","synonymous_variant","MT-ND3","protein_coding",13,"L",0.37093,"-","-","synonymous","NA","NA",65,"NA"]
[4777,"C>T","4777C>T",0.087650733795508,0.0054813,0.0004804,9,54,20,1,0.908573043209136,47.1004901960784,"CTRL","missense_variant","MT-ND2","protein_coding",103,"A/V",0.54315,"tolerated(0.15)","benign(0.041)","missense",0.15,0.041,66,"NA"]
[11499,"C>T","11499C>T",0.0650287545387104,5.4795E-3,0.0003563,36,49,14,0,0.802459770405489,58.2982026143791,"CTRL","missense_variant","MT-ND4","protein_coding",247,"T/M",0.79395,"tolerated_low_confidence(0.23)","benign(0.003)","missense",0.23,0.003,67,"NA"]
[10762,"G>A","10762G>A",0.121523020747252,0.0053917,0.0006552,14,56,23,6,0.827747243482522,47.125,"CTRL","missense_variant","MT-ND4L","protein_coding",98,"C/Y",0.72548,"deleterious(0)","probably_damaging(1)","missense",0,1,68,"NA"]
[10762,"G>A","10762G>A",0.121523020747252,0.0053917,0.0006552,14,56,23,6,0.827747243482522,47.125,"CTRL","synonymous_variant","MT-ND4","protein_coding",1,"M",0.72548,"-","-","synonymous","NA","NA",69,"NA"]
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[11672,"A>T","11672A>T",0.129251686751276,0.0052363,0.0006768,18,66,19,5,0.786508856608828,61.3178104575163,"CTRL","missense_variant","MT-ND4","protein_coding",305,"T/S",0.96258,"tolerated_low_confidence(0.12)","probably_damaging(0.988)","missense",0.12,0.988,71,"NA"]
[15949,"G>A","15949G>A",0.0901452567632466,0.0051937,4.682E-4,11,61,24,6,0.800511213474194,46.562091503268,"CTRL","non_coding_transcript_exon_variant","MT-TT","Mt_tRNA","-","-",0.09554,"-","-","non-coding","NA","NA",72,"NA"]
[3970,"C>T","3970C>T",0.0957787403283078,0.0051564,0.0004939,20,64,15,2,0.821707177994076,60.8415032679739,"CTRL","synonymous_variant","MT-ND1","protein_coding",222,"L",0.8948,"-","-","synonymous","NA","NA",73,"NA"]
[808,"C>T","808C>T",0.0928852702081371,0.0050446,0.0004686,8,52,17,2,0.915600520200741,55.874183006536,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.28792,"-","-","non-coding","NA","NA",74,"NA"]
[6617,"C>T","6617C>T",0.100365451135359,0.004998,0.0005016,10,62,21,3,0.830877697537753,50.5106209150327,"CTRL","synonymous_variant","MT-CO1","protein_coding",238,"F",0.999,"-","-","synonymous","NA","NA",75,"NA"]
[14872,"C>T","14872C>T",0.0906578107110111,0.0049456,4.484E-4,13,51,18,4,0.813570680094797,58.4795751633987,"CTRL","synonymous_variant","MT-CYB","protein_coding",42,"I",0.14563,"-","-","synonymous","NA","NA",76,"NA"]
[7849,"C>T","7849C>T",0.083438566464449,0.0048615,0.0004056,16,41,12,4,0.906088237535514,60.3308823529412,"CTRL","synonymous_variant","MT-CO2","protein_coding",88,"D",0.57692,"-","-","synonymous","NA","NA",77,"NA"]
[15207,"C>A","15207C>A",0.0898415153589081,0.0048202,0.0004331,14,47,19,1,0.967362682063391,57.9673202614379,"CTRL","missense_variant","MT-CYB","protein_coding",154,"P/Q",0.20656,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,78,"NA"]
[5348,"C>A","5348C>A",0.0918274791233344,4.8084E-3,4.415E-4,7,51,18,5,0.963191198397624,52.3325163398693,"CTRL","stop_gained","MT-ND2","protein_coding",293,"Y/*",0.94773,"-","-","truncating","NA","NA",79,"NA"]
[12053,"C>T","12053C>T",0.0717499191538748,0.004783,0.0003432,14,47,9,1,0.742129687778074,58.9305555555556,"CTRL","missense_variant","MT-ND4","protein_coding",432,"R/W",0.63094,"deleterious_low_confidence(0)","probably_damaging(0.987)","missense",0,0.987,80,"NA"]
[5255,"C>T","5255C>T",0.0885439753903636,0.004658,4.124E-4,14,51,14,3,0.914428462643568,62.0906862745098,"CTRL","synonymous_variant","MT-ND2","protein_coding",262,"P",0.75303,"-","-","synonymous","NA","NA",81,"NA"]
[1018,"G>A","1018G>A",0.077976841462108,0.0046015,0.0003588,8,49,14,1,0.925641602179385,51.843954248366,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.5739,"-","-","non-coding","NA","NA",82,"NA"]
[1787,"G>A","1787G>A",0.0771940964530587,0.0045881,0.0003542,6,46,18,5,0.810209867492097,45.0514705882353,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.67753,"-","-","non-coding","NA","NA",83,"NA"]
[8833,"G>A","8833G>A",0.0604638653437302,0.0045603,0.0002757,9,41,9,0,0.952442299343155,56.6127450980392,"CTRL","missense_variant","MT-ATP6","protein_coding",103,"A/T",0.06307,"deleterious(0.01)","probably_damaging(0.995)","missense",0.01,0.995,84,"NA"]
[9295,"G>A","9295G>A",0.0881016641429298,0.0043507,0.0003833,19,58,16,1,0.905616372959334,72.8611111111111,"CTRL","missense_variant","MT-CO3","protein_coding",30,"G/D",0.22443,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,85,"NA"]
[6174,"G>A","6174G>A",0.0796824219085058,0.0042322,0.0003372,15,42,11,1,0.809977271364847,66.9861111111111,"CTRL","missense_variant","MT-CO1","protein_coding",91,"D/N",0.96816,"deleterious_low_confidence(0)","possibly_damaging(0.784)","missense",0,0.784,86,"NA"]
[13380,"C>T","13380C>T",0.0857494133073449,0.0042269,0.0003625,8,51,11,2,0.902633342964157,56.8251633986928,"CTRL","synonymous_variant","MT-ND5","protein_coding",348,"H",0.67964,"-","-","synonymous","NA","NA",87,"NA"]
[10944,"C>T","10944C>T",0.0804794299488535,0.0040756,3.28E-4,11,43,12,3,0.905624268823027,63.3447712418301,"CTRL","missense_variant","MT-ND4","protein_coding",62,"T/M",0.84803,"deleterious_low_confidence(0)","possibly_damaging(0.858)","missense",0,0.858,88,"NA"]
[9837,"G>A","9837G>A",0.0973948627980791,4.0355E-3,0.000393,7,40,14,2,0.757666098064395,51.4232026143791,"CTRL","missense_variant","MT-CO3","protein_coding",211,"G/S",0.25125,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,89,"NA"]
[2389,"C>T","2389C>T",0.0614239629353683,0.0040119,0.0002464,7,37,6,0,0.757601001222788,51.5220588235294,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.17104,"-","-","non-coding","NA","NA",90,"NA"]
[12092,"C>A","12092C>A",0.140584539022014,3.993E-3,0.0005614,26,37,20,3,0.835368398088946,54.4256535947712,"CTRL","missense_variant","MT-ND4","protein_coding",445,"L/I",0.24208,"tolerated_low_confidence(0.72)","probably_damaging(0.954)","missense",0.72,0.954,91,"NA"]
[11761,"C>T","11761C>T",0.0568303416770577,0.0038987,0.0002216,4,28,8,0,0.985163592146809,58.4656862745098,"CTRL","synonymous_variant","MT-ND4","protein_coding",334,"Y",0.96569,"-","-","synonymous","NA","NA",92,"NA"]
[1989,"C>T","1989C>T",0.100864940306152,0.0038705,3.904E-4,9,41,15,7,0.771842164737135,51.0816993464052,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.62985,"-","-","non-coding","NA","NA",93,"NA"]
[4599,"C>T","4599C>T",0.113119542960186,0.0038594,0.0004366,10,42,18,4,0.902477185095116,52.499183006536,"CTRL","synonymous_variant","MT-ND2","protein_coding",44,"L",0.66329,"-","-","synonymous","NA","NA",94,"NA"]
[14947,"C>T","14947C>T",0.0662174115554725,0.0037903,0.000251,6,31,9,0,0.996697421527505,64.6650326797386,"CTRL","synonymous_variant","MT-CYB","protein_coding",67,"A",0.4258,"-","-","synonymous","NA","NA",95,"NA"]
[7909,"C>T","7909C>T",0.0792082680615489,0.0037798,0.0002994,12,34,12,0,0.856083557691206,68.9509803921569,"CTRL","synonymous_variant","MT-CO2","protein_coding",108,"Y",0.7808,"-","-","synonymous","NA","NA",96,"NA"]
[13169,"T>C","13169T>C",0.0926879803514738,0.0036453,0.0003379,12,32,12,1,0.798157413584253,50.203431372549,"CTRL","missense_variant","MT-ND5","protein_coding",278,"L/P",0.5542,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,97,"NA"]
[2655,"G>A","2655G>A",0.130813694728501,0.0036302,4.749E-4,19,34,14,4,0.921563366542013,53.7875816993464,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.69111,"-","-","non-coding","NA","NA",98,"NA"]
[5920,"G>A","5920G>A",0.0695894780300239,0.0036161,0.0002516,27,30,12,0,0.894033761369197,61.9052287581699,"CTRL","stop_gained","MT-CO1","protein_coding",6,"W/*",0.54195,"-","-","truncating","NA","NA",99,"NA"]
[9027,"C>T","9027C>T",0.0592606742688847,0.0035002,2.074E-4,7,31,6,0,0.981741782995248,67.6903594771242,"CTRL","synonymous_variant","MT-ATP6","protein_coding",167,"G",0.17693,"-","-","synonymous","NA","NA",100,"NA"]
[13421,"T>C","13421T>C",0.0740583800018947,0.0034805,0.0002578,4,33,11,1,0.851197333059724,49.0596405228758,"CTRL","missense_variant","MT-ND5","protein_coding",362,"L/P",0.86104,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,101,"NA"]
[15698,"C>T","15698C>T",0.103594317475909,0.0034696,0.0003594,7,36,13,2,0.856790911200223,53.2165032679739,"CTRL","missense_variant","MT-CYB","protein_coding",318,"R/C",0.47836,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,102,"NA"]
[12863,"G>A","12863G>A",0.0577904611139777,0.0034687,0.0002005,5,25,6,0,0.988465022555314,56.7630718954248,"CTRL","missense_variant","MT-ND5","protein_coding",176,"R/H",0.75195,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,103,"NA"]
[15490,"C>T","15490C>T",0.0582631246222696,3.3238E-3,0.0001937,8,33,7,1,0.750403446807457,52.6021241830065,"CTRL","synonymous_variant","MT-CYB","protein_coding",248,"D",0.09877,"-","-","synonymous","NA","NA",104,"NA"]
[13996,"G>A","13996G>A",0.0878599192400808,0.0033188,0.0002916,11,41,13,1,0.947329078306344,64.7434640522876,"CTRL","missense_variant","MT-ND5","protein_coding",554,"D/N",0.24138,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,105,"NA"]
[13541,"C>T","13541C>T",0.0820773299147231,0.0033028,0.0002711,9,36,10,0,0.880659235786811,62.3366013071895,"CTRL","missense_variant","MT-ND5","protein_coding",402,"S/L",0.61093,"deleterious_low_confidence(0)","probably_damaging(0.973)","missense",0,0.973,106,"NA"]
[12468,"T>A","12468T>A",0.0750111922587818,0.0032903,0.0002468,7,34,13,3,0.991943721947476,59.3447712418301,"CTRL","missense_variant","MT-ND5","protein_coding",44,"F/L",0.65653,"deleterious_low_confidence(0.04)","probably_damaging(0.96)","missense",0.04,0.96,107,"NA"]
[15539,"C>T","15539C>T",0.0864663251844725,3.2813E-3,0.0002837,5,33,8,1,0.907253563601763,61.5,"CTRL","missense_variant","MT-CYB","protein_coding",265,"P/S",0.50244,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,108,"NA"]
[8720,"G>T","8720G>T",0.0800752693517932,0.0032617,0.0002612,2,39,12,1,0.976704318718812,45.5874183006536,"CTRL","missense_variant","MT-ATP6","protein_coding",65,"G/V",0.10067,"deleterious(0)","probably_damaging(0.999)","missense",0,0.999,109,"NA"]
[12503,"G>A","12503G>A",0.0574231617422078,0.0032547,0.0001869,5,28,4,0,0.985381587773908,54.7222222222222,"CTRL","missense_variant","MT-ND5","protein_coding",56,"C/Y",0.43349,"tolerated_low_confidence(1)","probably_damaging(0.992)","missense",1,0.992,110,"NA"]
[5237,"G>A","5237G>A",0.0698445384205887,3.2521E-3,0.0002271,9,32,10,1,0.765134125225079,64.8153594771242,"CTRL","synonymous_variant","MT-ND2","protein_coding",256,"P",0.97275,"-","-","synonymous","NA","NA",111,"NA"]
[15602,"A>G","15602A>G",0.05360723121788,0.0032387,0.0001736,7,28,6,0,0.974891852573051,61.8031045751634,"CTRL","missense_variant","MT-CYB","protein_coding",286,"N/D",0.44414,"deleterious_low_confidence(0)","probably_damaging(0.99)","missense",0,0.99,112,"NA"]
[6122,"C>T","6122C>T",0.0751197875701441,0.0032213,2.42E-4,5,29,9,2,0.72271228658828,58.0792483660131,"CTRL","synonymous_variant","MT-CO1","protein_coding",73,"I",0.67415,"-","-","synonymous","NA","NA",113,"NA"]
[12319,"C>A","12319C>A",0.0695261251724703,3.1744E-3,2.207E-4,3,26,11,3,0.906663596835249,39.6348039215686,"CTRL","non_coding_transcript_exon_variant","MT-TL2","Mt_tRNA","-","-",0.47384,"-","-","non-coding","NA","NA",114,"NA"]
[14895,"T>A","14895T>A",0.0573824301160526,3.1481E-3,1.806E-4,10,28,6,0,0.982510863029136,62.8031045751634,"CTRL","missense_variant","MT-CYB","protein_coding",50,"F/Y",0.20152,"deleterious_low_confidence(0)","probably_damaging(0.965)","missense",0,0.965,115,"NA"]
[6280,"G>A","6280G>A",0.0491230505439761,0.0031447,0.0001545,5,25,3,0,0.975751943216467,64.1699346405229,"CTRL","stop_gained","MT-CO1","protein_coding",126,"W/*",0.64428,"-","-","truncating","NA","NA",116,"NA"]
[4349,"C>T","4349C>T",0.0716849054246078,0.0030912,0.0002216,12,27,9,0,0.667136467772306,51.0098039215686,"CTRL","non_coding_transcript_exon_variant","MT-TQ","Mt_tRNA","-","-",0.6045,"-","-","non-coding","NA","NA",117,"NA"]
[3715,"G>A","3715G>A",0.0948373715318456,0.003051,0.0002894,9,33,11,1,0.938179455696363,60.5171568627451,"CTRL","missense_variant","MT-ND1","protein_coding",137,"A/T",0.674,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,118,"NA"]
[3074,"A>C","3074A>C",0.0881484836129963,0.0030174,0.000266,3,28,10,2,0.909653367550168,51.1732026143791,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.94143,"-","-","non-coding","NA","NA",119,"NA"]
[1619,"C>T","1619C>T",0.0666137886010618,3.0133E-3,2.007E-4,2,31,8,1,0.975101980558983,58.0220588235294,"CTRL","non_coding_transcript_exon_variant","MT-TV","Mt_tRNA","-","-",0.5038,"-","-","non-coding","NA","NA",120,"NA"]
[3208,"C>T","3208C>T",0.114635754821719,0.0029847,0.0003422,6,31,13,3,0.960338470519079,49.2704248366013,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.167,"-","-","non-coding","NA","NA",121,"NA"]
[12774,"C>T","12774C>T",0.0873499368906429,0.0029655,0.000259,4,33,13,0,0.936106684966127,56.7532679738562,"CTRL","synonymous_variant","MT-ND5","protein_coding",146,"G",0.84549,"-","-","synonymous","NA","NA",122,"NA"]
[13440,"C>T","13440C>T",0.0474421406754155,0.0029611,1.405E-4,5,15,3,1,0.966140427605554,55.4575163398693,"CTRL","synonymous_variant","MT-ND5","protein_coding",368,"L",0.47707,"-","-","synonymous","NA","NA",123,"NA"]
[13370,"C>T","13370C>T",0.098963949629818,2.9597E-3,0.0002929,5,25,11,3,0.981787394544021,54.9313725490196,"CTRL","missense_variant","MT-ND5","protein_coding",345,"S/F",0.63338,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,124,"NA"]
[2002,"G>A","2002G>A",0.106370514449352,0.0029484,0.0003136,9,34,15,2,0.69277952865026,53.202614379085,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.75333,"-","-","non-coding","NA","NA",125,"NA"]
[9162,"C>T","9162C>T",0.0505571018960288,0.0029435,0.0001488,5,25,5,0,0.936970266124865,62.4501633986928,"CTRL","synonymous_variant","MT-ATP6","protein_coding",212,"Y",0.11153,"-","-","synonymous","NA","NA",126,"NA"]
[15400,"C>T","15400C>T",0.0911991984181688,2.9156E-3,0.0002659,5,39,8,1,0.975785223169932,54.6421568627451,"CTRL","synonymous_variant","MT-CYB","protein_coding",218,"I",0.13024,"-","-","synonymous","NA","NA",127,"NA"]
[9512,"C>T","9512C>T",0.0592395910986996,0.002902,1.719E-4,5,33,5,2,0.728918266392371,62.5,"CTRL","synonymous_variant","MT-CO3","protein_coding",102,"Y",0.52435,"-","-","synonymous","NA","NA",128,"NA"]
[12237,"C>T","12237C>T",0.0850878796775467,0.0028756,0.0002447,5,34,9,2,0.948992265099269,51.4248366013072,"CTRL","non_coding_transcript_exon_variant","MT-TS2","Mt_tRNA","-","-",0.25693,"-","-","non-coding","NA","NA",129,"NA"]
[12061,"C>T","12061C>T",0.0550705417582028,0.0028243,0.0001555,4,14,4,0,0.746034979235228,57.5661764705882,"CTRL","synonymous_variant","MT-ND4","protein_coding",434,"N",0.47737,"-","-","synonymous","NA","NA",130,"NA"]
[9168,"C>T","9168C>T",0.070938660095835,0.0027925,0.0001981,7,27,5,1,0.987780780256579,62.3178104575163,"CTRL","synonymous_variant","MT-ATP6","protein_coding",214,"F",0.09542,"-","-","synonymous","NA","NA",131,"NA"]
[9835,"T>C","9835T>C",0.0580190032090968,0.0027892,1.618E-4,7,30,6,2,0.95470923382692,52.4321895424837,"CTRL","missense_variant","MT-CO3","protein_coding",210,"I/T",0.27467,"deleterious_low_confidence(0)","probably_damaging(0.967)","missense",0,0.967,132,"NA"]
[9907,"G>C","9907G>C",0.0673063260340145,0.002772,0.0001866,7,29,7,0,0.928988970282443,58.9468954248366,"CTRL","missense_variant","MT-CO3","protein_coding",234,"G/A",0.46252,"deleterious_low_confidence(0)","probably_damaging(0.995)","missense",0,0.995,133,"NA"]
[7916,"A>G","7916A>G",0.0491082085402645,0.002767,1.359E-4,5,22,3,0,0.97589665744549,64.3684640522876,"CTRL","missense_variant","MT-CO2","protein_coding",111,"T/A",0.66667,"deleterious_low_confidence(0.01)","probably_damaging(0.99)","missense",0.01,0.99,134,"NA"]
[8387,"G>A","8387G>A",0.0952102104206922,0.0027588,0.0002627,6,29,8,1,0.957519398080602,54.7859477124183,"CTRL","missense_variant","MT-ATP8","protein_coding",8,"V/M",0.08914,"deleterious(0.01)","probably_damaging(0.992)","missense",0.01,0.992,135,"NA"]
[15608,"C>T","15608C>T",0.076900952986609,0.0027559,2.119E-4,5,31,7,0,0.778967499884709,58.6985294117647,"CTRL","synonymous_variant","MT-CYB","protein_coding",288,"L",0.35216,"-","-","synonymous","NA","NA",136,"NA"]
[6875,"C>T","6875C>T",0.0908046540724251,0.0027463,0.0002494,9,36,9,0,0.777200707463286,62.1748366013072,"CTRL","synonymous_variant","MT-CO1","protein_coding",324,"L",0.8627,"-","-","synonymous","NA","NA",137,"NA"]
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[9908,"C>T","9908C>T",0.0670178300320263,0.0025535,0.0001711,2,26,6,0,0.861766371370829,59.8300653594771,"CTRL","synonymous_variant","MT-CO3","protein_coding",234,"G",0.4713,"-","-","synonymous","NA","NA",149,"NA"]
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[9520,"G>A","9520G>A",0.0691673333453358,0.0024657,1.705E-4,5,19,7,0,0.913161849612655,60.968137254902,"CTRL","missense_variant","MT-CO3","protein_coding",105,"S/N",0.48023,"deleterious_low_confidence(0)","probably_damaging(0.94)","missense",0,0.94,156,"NA"]
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[14225,"C>T","14225C>T",0.0694375442453545,0.0023753,1.649E-4,7,25,5,1,0.686738189364752,52.625816993464,"CTRL","missense_variant","MT-ND6","protein_coding",150,"R/H",0.36798,"tolerated(0.51)","possibly_damaging(0.752)","missense",0.51,0.752,167,"NA"]
[15215,"G>A","15215G>A",0.0899998137371656,0.0023731,0.0002136,4,20,5,1,0.980851508566472,53.0171568627451,"CTRL","stop_gained","MT-CYB","protein_coding",157,"G/*",0.15945,"-","-","truncating","NA","NA",168,"NA"]
[6445,"C>T","6445C>T",0.0684664111342736,0.0023664,0.000162,7,24,2,0,0.829721852297021,63.1797385620915,"CTRL","missense_variant","MT-CO1","protein_coding",181,"T/M",0.55978,"tolerated_low_confidence(0.71)","benign(0.124)","missense",0.71,0.124,169,"NA"]
[9270,"C>T","9270C>T",0.0860694860157023,2.3609E-3,0.0002032,7,26,5,1,0.684016589920769,68.5179738562092,"CTRL","missense_variant","MT-CO3","protein_coding",22,"L/F",0.4407,"deleterious_low_confidence(0.04)","benign(0.007)","missense",0.04,0.007,170,"NA"]
[3700,"G>A","3700G>A",0.103990434681352,0.0023527,0.0002447,3,17,5,1,0.982513584687129,60.0751633986928,"CTRL","missense_variant","MT-ND1","protein_coding",132,"A/T",0.86867,"deleterious_low_confidence(0)","benign(0.123)","missense",0,0.123,171,"NA"]
[13682,"C>T","13682C>T",0.0676208297018518,0.0023293,0.0001575,3,22,4,0,0.764252779084704,54.7156862745098,"CTRL","missense_variant","MT-ND5","protein_coding",449,"T/I",0.41481,"tolerated_low_confidence(0.39)","possibly_damaging(0.624)","missense",0.39,0.624,172,"NA"]
[8878,"C>T","8878C>T",0.0761262361379305,0.0023234,0.0001769,2,20,6,1,0.957474784326286,60.4820261437908,"CTRL","missense_variant","MT-ATP6","protein_coding",118,"R/C",0.11624,"deleterious(0)","probably_damaging(0.997)","missense",0,0.997,173,"NA"]
[2487,"A>T","2487A>T",0.0827485724285451,0.0023071,0.0001909,2,23,8,2,0.987241380944829,60.9101307189542,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.87727,"-","-","non-coding","NA","NA",174,"NA"]
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[7985,"C>T","7985C>T",0.0599086272273755,0.0022704,1.36E-4,4,22,1,1,0.746581092653348,65.4926470588235,"CTRL","missense_variant","MT-CO2","protein_coding",134,"R/W",0.69023,"deleterious_low_confidence(0.01)","probably_damaging(1)","missense",0.01,1,176,"NA"]
[13848,"C>T","13848C>T",0.0977303663799522,0.002259,2.208E-4,4,26,10,3,0.92597910615223,52.8022875816993,"CTRL","synonymous_variant","MT-ND5","protein_coding",504,"L",0.59928,"-","-","synonymous","NA","NA",177,"NA"]
[7341,"C>T","7341C>T",0.0810915445494519,0.0022356,0.0001813,4,27,4,0,0.686730963451088,49.3349673202614,"CTRL","missense_variant","MT-CO1","protein_coding",480,"R/W",0.21836,"deleterious_low_confidence(0)","probably_damaging(0.997)","missense",0,0.997,178,"NA"]
[9525,"G>A","9525G>A",0.0750964222734893,2.2334E-3,0.0001677,7,16,8,5,0.829452216505612,58.8954248366013,"CTRL","missense_variant","MT-CO3","protein_coding",107,"A/T",0.39351,"deleterious_low_confidence(0.03)","probably_damaging(0.976)","missense",0.03,0.976,179,"NA"]
[1484,"C>T","1484C>T",0.0646217968525728,2.2285E-3,1.44E-4,2,18,6,0,0.990486293980896,57.9240196078431,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.84142,"-","-","non-coding","NA","NA",180,"NA"]
[4152,"C>T","4152C>T",0.0786200715496539,0.002224,1.749E-4,5,21,5,1,0.815658101159064,59.5106209150327,"CTRL","synonymous_variant","MT-ND1","protein_coding",282,"Y",0.71269,"-","-","synonymous","NA","NA",181,"NA"]
[9958,"T>C","9958T>C",0.0711172987127011,0.002219,0.0001578,4,21,8,0,0.894288227798238,39.3946078431373,"CTRL","missense_variant","MT-CO3","protein_coding",251,"F/S",0.41759,"deleterious_low_confidence(0)","benign(0.202)","missense",0,0.202,182,"NA"]
[6300,"G>A","6300G>A",0.0869656759896605,0.0021907,1.905E-4,5,25,8,1,0.731282408261554,60.4150326797386,"CTRL","missense_variant","MT-CO1","protein_coding",133,"A/T",0.84024,"deleterious_low_confidence(0)","benign(0.239)","missense",0,0.239,183,"NA"]
[15810,"C>T","15810C>T",0.0670241802855204,2.1887E-3,0.0001467,2,22,7,2,0.897463874948747,44.4191176470588,"CTRL","missense_variant","MT-CYB","protein_coding",355,"S/F",0.19054,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,184,"NA"]
[12381,"A>T","12381A>T",0.0487615198553677,0.0021831,1.065E-4,3,18,3,0,0.939014601269829,53.515522875817,"CTRL","synonymous_variant","MT-ND5","protein_coding",15,"L",0.3005,"-","-","synonymous","NA","NA",185,"NA"]
[9569,"C>T","9569C>T",0.0510483251300842,0.0021637,1.105E-4,5,15,3,0,0.963087654542343,61.546568627451,"CTRL","synonymous_variant","MT-CO3","protein_coding",121,"I",0.49237,"-","-","synonymous","NA","NA",186,"NA"]
[11497,"C>T","11497C>T",0.129420891244465,0.0021583,0.0002793,3,25,10,1,0.898775857210752,56.4019607843137,"CTRL","synonymous_variant","MT-ND4","protein_coding",246,"L",0.80433,"-","-","synonymous","NA","NA",187,"NA"]
[13300,"C>T","13300C>T",0.0879891132519828,2.0937E-3,0.0001842,4,24,8,0,0.712024971142638,58.1421568627451,"CTRL","missense_variant","MT-ND5","protein_coding",322,"P/S",0.89695,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,188,"NA"]
[7607,"G>A","7607G>A",0.0485958891331317,0.0020793,1.01E-4,1,12,1,1,0.871715057481457,51.0792483660131,"CTRL","missense_variant","MT-CO2","protein_coding",8,"G/S",0.4159,"deleterious_low_confidence(0.01)","benign(0.038)","missense",0.01,0.038,189,"NA"]
[11222,"G>A","11222G>A",0.107635114199428,0.0020635,2.221E-4,5,19,10,1,0.811673484233675,60.1813725490196,"CTRL","missense_variant","MT-ND4","protein_coding",155,"V/M",0.86327,"tolerated_low_confidence(0.37)","probably_damaging(0.997)","missense",0.37,0.997,190,"NA"]
[7031,"C>T","7031C>T",0.069457653590898,0.0020543,1.427E-4,2,20,5,0,0.843656819804921,52.0996732026144,"CTRL","synonymous_variant","MT-CO1","protein_coding",376,"H",0.91946,"-","-","synonymous","NA","NA",191,"NA"]
[9277,"C>T","9277C>T",0.0718302202854557,0.002038,0.0001464,7,18,5,0,0.893470091116759,71.7565359477124,"CTRL","missense_variant","MT-CO3","protein_coding",24,"A/V",0.30276,"deleterious_low_confidence(0.02)","benign(0.148)","missense",0.02,0.148,192,"NA"]
[3036,"G>A","3036G>A",0.132111858592063,0.0020315,0.0002684,5,21,7,1,0.724811372470568,54.2916666666667,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.97006,"-","-","non-coding","NA","NA",193,"NA"]
[11979,"C>T","11979C>T",0.0874634247911195,2.0171E-3,0.0001764,2,17,2,2,0.888753825999075,49.8202614379085,"CTRL","missense_variant","MT-ND4","protein_coding",407,"S/F",0.48192,"deleterious_low_confidence(0)","probably_damaging(0.983)","missense",0,0.983,194,"NA"]
[9582,"C>T","9582C>T",0.0920568607563111,2.0144E-3,0.0001854,4,26,7,1,0.703013405031541,57.9983660130719,"CTRL","missense_variant","MT-CO3","protein_coding",126,"P/S",0.36481,"deleterious_low_confidence(0)","probably_damaging(0.997)","missense",0,0.997,195,"NA"]
[8734,"C>T","8734C>T",0.0630608610537225,0.0020118,0.0001269,2,18,5,0,0.976631667469085,54.4174836601307,"CTRL","missense_variant","MT-ATP6","protein_coding",70,"L/F",0.15831,"tolerated(0.06)","probably_damaging(0.997)","missense",0.06,0.997,196,"NA"]
[11651,"G>A","11651G>A",0.128663729861939,0.0020097,2.586E-4,6,22,10,3,0.990152648451952,60.1666666666667,"CTRL","missense_variant","MT-ND4","protein_coding",298,"V/M",0.88804,"deleterious_low_confidence(0)","benign(0.436)","missense",0,0.436,197,"NA"]
[8764,"G>A","8764G>A",0.0541083308087546,0.0020063,1.086E-4,1,14,3,0,0.930552078536364,53.7524509803922,"CTRL","missense_variant","MT-ATP6","protein_coding",80,"A/T",0.10921,"tolerated(0.12)","benign(0.007)","missense",0.12,0.007,198,"NA"]
[9301,"C>T","9301C>T",0.0387667546018489,0.0019997,{"v":7.75E-5,"d":"7.75E-05"},4,9,1,0,0.945949769608957,70.6813725490196,"CTRL","missense_variant","MT-CO3","protein_coding",32,"A/V",0.17315,"tolerated_low_confidence(0.25)","benign(0.001)","missense",0.25,1E-3,199,"NA"]
[15265,"C>T","15265C>T",0.0578388312996739,0.0019975,1.155E-4,2,14,3,0,0.847170535779112,55.625816993464,"CTRL","synonymous_variant","MT-CYB","protein_coding",173,"P",0.42649,"-","-","synonymous","NA","NA",200,"NA"]
[7048,"C>T","7048C>T",0.0862690236335803,0.0019837,0.0001711,5,21,4,2,0.899904858231466,55.5988562091503,"CTRL","missense_variant","MT-CO1","protein_coding",382,"S/L",0.78478,"deleterious_low_confidence(0)","possibly_damaging(0.49)","missense",0,0.49,201,"NA"]
[14984,"C>T","14984C>T",0.0988087167873189,1.9824E-3,0.0001959,4,16,8,1,0.860919668753514,63.0555555555556,"CTRL","missense_variant","MT-CYB","protein_coding",80,"R/C",0.35693,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,202,"NA"]
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[10995,"C>T","10995C>T",0.076922059777422,1.8338E-3,0.0001411,1,17,6,0,0.887157815055357,63.2622549019608,"CTRL","missense_variant","MT-ND4","protein_coding",79,"A/V",0.92902,"deleterious_low_confidence(0)","probably_damaging(0.993)","missense",0,0.993,213,"NA"]
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[7291,"C>T","7291C>T",0.0639379680437219,0.0017938,1.147E-4,2,15,7,2,0.972064829168565,44.6356209150327,"CTRL","missense_variant","MT-CO1","protein_coding",463,"T/M",0.42136,"tolerated_low_confidence(0.27)","benign(0.01)","missense",0.27,0.01,219,"NA"]
[5316,"G>A","5316G>A",0.0748982018425543,0.0017881,1.339E-4,10,14,5,3,0.913688612638652,57.5686274509804,"CTRL","missense_variant","MT-ND2","protein_coding",283,"A/T",0.18118,"tolerated(0.11)","benign(0.01)","missense",0.11,0.01,220,"NA"]
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[16108,"C>T","16108C>T",0.0639152765760513,0.0017735,0.0001134,1,17,2,1,0.742378213596837,37.3145424836601,"CTRL","intergenic_variant","-","-","-","-",0.11117,"-","-","non-coding","NA","NA",223,"NA"]
[10678,"A>G","10678A>G",0.0628356449424264,1.7714E-3,0.0001113,5,18,5,0,0.72882104081824,65.4910130718954,"CTRL","missense_variant","MT-ND4L","protein_coding",70,"E/G",0.94478,"deleterious(0)","probably_damaging(0.938)","missense",0,0.938,224,"NA"]
[518,"C>T","518C>T",0.0664152397720929,1.766E-3,0.0001173,5,15,3,0,0.787386423538819,68.9305555555556,"CTRL","intergenic_variant","-","-","-","-",0.02022,"-","-","non-coding","NA","NA",225,"NA"]
[5969,"C>T","5969C>T",0.152901935594101,0.0017624,0.0002695,3,15,5,2,0.974145098517142,55.1650326797386,"CTRL","synonymous_variant","MT-CO1","protein_coding",22,"F",0.7954,"-","-","synonymous","NA","NA",226,"NA"]
[7048,"C>A","7048C>A",0.0721395194467541,0.0017486,1.261E-4,3,13,4,1,0.957736630493085,55.5988562091503,"CTRL","stop_gained","MT-CO1","protein_coding",382,"S/*",0.78478,"-","-","truncating","NA","NA",227,"NA"]
[7026,"G>A","7026G>A",0.0681177104106542,1.7458E-3,1.189E-4,3,14,5,1,0.789323529925642,50.5416666666667,"CTRL","missense_variant","MT-CO1","protein_coding",375,"A/T",0.94737,"deleterious_low_confidence(0)","probably_damaging(0.996)","missense",0,0.996,228,"NA"]
[10396,"G>A","10396G>A",0.0982923303166456,0.0017425,0.0001713,2,17,10,4,0.910447977650793,38.4468954248366,"CTRL","stop_gained","MT-ND3","protein_coding",113,"W/*",0.60568,"-","-","truncating","NA","NA",229,"NA"]
[3275,"C>T","3275C>T",0.109804050036504,1.7423E-3,0.0001913,3,20,4,1,0.669766156762025,60.4885620915033,"CTRL","non_coding_transcript_exon_variant","MT-TL1","Mt_tRNA","-","-",0.71954,"-","-","non-coding","NA","NA",230,"NA"]
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[8834,"C>T","8834C>T",0.135787655927758,1.7224E-3,0.0002339,4,22,9,1,0.770234219735128,55.9730392156863,"CTRL","missense_variant","MT-ATP6","protein_coding",103,"A/V",0.06041,"deleterious(0)","probably_damaging(0.993)","missense",0,0.993,232,"NA"]
[3650,"C>T","3650C>T",0.073550614388968,1.7197E-3,0.0001265,4,18,4,0,0.866571127682176,60.8104575163399,"CTRL","missense_variant","MT-ND1","protein_coding",115,"S/L",0.48204,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,233,"NA"]
[10267,"C>T","10267C>T",0.089050287452934,1.7093E-3,0.0001522,1,22,7,1,0.6818192811196,47.3202614379085,"CTRL","missense_variant","MT-ND3","protein_coding",70,"A/V",0.96735,"deleterious_low_confidence(0.01)","probably_damaging(0.999)","missense",0.01,0.999,234,"NA"]
[6829,"C>T","6829C>T",0.0686983314431271,1.6963E-3,1.165E-4,1,12,5,0,0.991899738897684,63.093137254902,"CTRL","missense_variant","MT-CO1","protein_coding",309,"T/I",0.97145,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,235,"NA"]
[12236,"G>A","12236G>A",0.0928031000450565,0.0016942,1.572E-4,2,17,7,1,0.806923803008877,51.1151960784314,"CTRL","non_coding_transcript_exon_variant","MT-TS2","Mt_tRNA","-","-",0.25717,"-","-","non-coding","NA","NA",236,"NA"]
[14865,"G>A","14865G>A",0.0459891708568447,1.691E-3,{"v":7.78e-05,"d":"7.78E-05"},12,13,1,0,0.684997737572639,58.9436274509804,"CTRL","missense_variant","MT-CYB","protein_coding",40,"C/Y",0.22108,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,237,"NA"]
[6564,"G>A","6564G>A",0.0651851104016808,1.6883E-3,0.0001101,2,17,2,0,0.773480614246858,68.7140522875817,"CTRL","missense_variant","MT-CO1","protein_coding",221,"D/N",0.95069,"deleterious_low_confidence(0)","probably_damaging(0.994)","missense",0,0.994,238,"NA"]
[15660,"C>T","15660C>T",0.0751749465080284,0.0016838,0.0001266,3,14,5,1,0.654379473870925,46.5792483660131,"CTRL","missense_variant","MT-CYB","protein_coding",305,"P/L",0.03766,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,239,"NA"]
[11724,"C>T","11724C>T",0.0512715286270842,0.0016785,{"v":8.61e-05,"d":"8.61E-05"},3,14,3,1,0.73933712946471,61.3292483660131,"CTRL","missense_variant","MT-ND4","protein_coding",322,"T/M",0.82802,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,240,"NA"]
[11934,"C>T","11934C>T",0.126836085084516,0.0016549,0.0002099,4,20,8,1,0.751156418748812,55.7851307189542,"CTRL","missense_variant","MT-ND4","protein_coding",392,"T/I",0.51913,"deleterious_low_confidence(0)","probably_damaging(0.986)","missense",0,0.986,241,"NA"]
[13486,"C>T","13486C>T",0.0867086948294028,0.0016513,0.0001432,1,17,3,0,0.732352941176473,61.3513071895425,"CTRL","missense_variant","MT-ND5","protein_coding",384,"P/S",0.73668,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,242,"NA"]
[3817,"C>T","3817C>T",0.151729281911533,0.0016483,0.0002501,2,19,9,4,0.769315393175874,54.0261437908497,"CTRL","missense_variant","MT-ND1","protein_coding",171,"H/Y",0.53612,"tolerated_low_confidence(1)","benign(0.001)","missense",1,1E-3,243,"NA"]
[2982,"C>T","2982C>T",0.0890260982701093,0.0016479,0.0001467,3,18,6,2,0.771246640668168,50.5694444444444,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.80138,"-","-","non-coding","NA","NA",244,"NA"]
[10937,"C>T","10937C>T",0.0858689424208204,0.0016407,0.0001409,2,16,6,0,0.854295040349009,61.2467320261438,"CTRL","missense_variant","MT-ND4","protein_coding",60,"P/S",0.70161,"tolerated_low_confidence(0.48)","probably_damaging(0.996)","missense",0.48,0.996,245,"NA"]
[11178,"C>T","11178C>T",0.108127564898578,0.0016323,0.0001765,5,15,6,2,0.699495630124595,69.0710784313726,"CTRL","missense_variant","MT-ND4","protein_coding",140,"P/L",0.86031,"deleterious_low_confidence(0.02)","probably_damaging(0.998)","missense",0.02,0.998,246,"NA"]
[8747,"C>T","8747C>T",0.0692220226537851,0.0016161,1.119E-4,2,15,4,0,0.727191745562273,51.5653594771242,"CTRL","missense_variant","MT-ATP6","protein_coding",74,"S/F",0.11437,"deleterious(0)","benign(0.165)","missense",0,0.165,247,"NA"]
[4165,"C>T","4165C>T",0.0602825911344751,1.6152E-3,{"v":9.74e-05,"d":"9.74E-05"},4,14,2,0,0.78432652959722,66.7696078431373,"CTRL","missense_variant","MT-ND1","protein_coding",287,"H/Y",0.49279,"deleterious_low_confidence(0.04)","benign(0.019)","missense",0.04,0.019,248,"NA"]
[14121,"C>T","14121C>T",0.100045786925956,1.6137E-3,0.0001614,3,14,4,1,0.833953447274844,52.6535947712418,"CTRL","synonymous_variant","MT-ND5","protein_coding",595,"L",0.16317,"-","-","synonymous","NA","NA",249,"NA"]
[8054,"C>T","8054C>T",0.0683716796904314,1.5899E-3,1.087E-4,1,18,2,0,0.733066527661267,52.9281045751634,"CTRL","stop_gained","MT-CO2","protein_coding",157,"Q/*",0.96324,"-","-","truncating","NA","NA",250,"NA"]
[1691,"C>T","1691C>T",0.0872201714336192,1.5742E-3,1.373E-4,4,13,6,0,0.680908484039055,56.0522875816993,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.17288,"-","-","non-coding","NA","NA",251,"NA"]
[6535,"C>T","6535C>T",0.0795914849712246,0.0015618,0.0001243,5,18,4,0,0.66983597861764,63.8178104575163,"CTRL","missense_variant","MT-CO1","protein_coding",211,"T/M",0.97737,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,252,"NA"]
[14006,"G>A","14006G>A",0.0614359971380206,1.5455E-3,{"v":9.5e-05,"d":"9.50E-05"},1,10,4,1,0.972654518842673,51.8039215686275,"CTRL","stop_gained","MT-ND5","protein_coding",557,"W/*",0.33167,"-","-","truncating","NA","NA",253,"NA"]
[1377,"C>T","1377C>T",0.0992863706788428,1.5444E-3,0.0001533,3,16,6,0,0.703122096274887,54.4885620915033,"CTRL","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.52185,"-","-","non-coding","NA","NA",254,"NA"]
[10874,"C>T","10874C>T",0.0731511225161694,1.5429E-3,0.0001129,1,15,3,0,0.880652340473734,52.9501633986928,"CTRL","synonymous_variant","MT-ND4","protein_coding",39,"L",0.64844,"-","-","synonymous","NA","NA",255,"NA"]
[12914,"C>T","12914C>T",0.0825234247543722,0.0015373,0.0001269,1,18,3,0,0.844632768361582,56.3325163398693,"CTRL","missense_variant","MT-ND5","protein_coding",193,"S/F",0.30699,"tolerated_low_confidence(0.6)","possibly_damaging(0.836)","missense",0.6,0.836,256,"NA"]
[11028,"C>T","11028C>T",0.0781621157874002,1.5325E-3,1.198E-4,2,14,3,1,0.83562963371938,53.3104575163399,"CTRL","missense_variant","MT-ND4","protein_coding",90,"S/L",0.60529,"tolerated_low_confidence(0.63)","benign(0.001)","missense",0.63,1E-3,257,"NA"]
[9289,"C>T","9289C>T",0.0600448031686753,1.5191E-3,{"v":9.12e-05,"d":"9.12E-05"},5,7,1,1,0.920381514004925,74.2197712418301,"CTRL","missense_variant","MT-CO3","protein_coding",28,"T/I",0.23776,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,258,"NA"]
[16232,"C>T","16232C>T",0.0473433234500885,0.0015124,{"v":7.16e-05,"d":"7.16E-05"},1,15,2,1,0.715905411433518,49.6977124183007,"CTRL","intergenic_variant","-","-","-","-",0.03434,"-","-","non-coding","NA","NA",259,"NA"]
[15119,"G>A","15119G>A",0.052296406575091,1.508E-3,{"v":7.89e-05,"d":"7.89E-05"},1,12,1,0,0.733667551723692,60.1348039215686,"CTRL","missense_variant","MT-CYB","protein_coding",125,"A/T",0.29444,"deleterious_low_confidence(0.02)","benign(0.006)","missense",0.02,0.006,260,"NA"]
[10375,"G>A","10375G>A",0.038557486893745,1.4797E-3,{"v":5.71e-05,"d":"5.71E-05"},1,4,1,0,0.930908567233394,45.2745098039216,"CTRL","stop_gained","MT-ND3","protein_coding",106,"W/*",0.74703,"-","-","truncating","NA","NA",261,"NA"]
[9133,"G>A","9133G>A",0.0633439975973816,0.0014412,{"v":9.13e-05,"d":"9.13E-05"},1,10,5,0,0.787512797186932,62.9232026143791,"CTRL","missense_variant","MT-ATP6","protein_coding",203,"E/K",0.04922,"deleterious(0.02)","probably_damaging(0.988)","missense",0.02,0.988,262,"NA"]
[2657,"C>T","2657C>T",0.099121875078634,1.4177E-3,1.405E-4,2,17,6,1,0.873904378646714,55.9003267973856,"CTRL","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.71613,"-","-","non-coding","NA","NA",263,"NA"]
[12060,"A>T","12060A>T",0.105141901525277,1.4092E-3,1.482E-4,1,20,4,1,0.698721551691268,57.3970588235294,"CTRL","missense_variant","MT-ND4","protein_coding",434,"N/I",0.5035,"deleterious_low_confidence(0)","probably_damaging(0.991)","missense",0,0.991,264,"NA"]
[4086,"C>T","4086C>T",0.0660586339630452,0.0014022,{"v":9.26e-05,"d":"9.26E-05"},1,13,1,0,0.784550269697908,53.0228758169935,"CTRL","synonymous_variant","MT-ND1","protein_coding",260,"V",0.26634,"-","-","synonymous","NA","NA",265,"NA"]
[7623,"C>T","7623C>T",0.069162904338552,0.0013917,{"v":9.63e-05,"d":"9.63E-05"},2,13,5,1,0.950204685112607,49.8986928104575,"CTRL","missense_variant","MT-CO2","protein_coding",13,"T/I",0.52653,"deleterious_low_confidence(0.02)","probably_damaging(1)","missense",0.02,1,266,"NA"]
[6464,"C>T","6464C>T",0.0693294540297113,0.0013876,{"v":9.62e-05,"d":"9.62E-05"},1,13,2,0,0.818572817419922,61.8202614379085,"CTRL","synonymous_variant","MT-CO1","protein_coding",187,"S",0.50938,"-","-","synonymous","NA","NA",267,"NA"]
[13213,"C>T","13213C>T",0.0600337507940102,0.0013693,{"v":8.22e-05,"d":"8.22E-05"},3,11,3,0,0.736573779003949,65.0367647058823,"CTRL","missense_variant","MT-ND5","protein_coding",293,"L/F",0.83873,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,268,"NA"]
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[9921,"G>A","9921G>A",0.0846013275153762,0.0252282,2.1343E-3,402,163,72,18,0.985593188474762,288.294667913938,"KIA2","missense_variant","MT-CO3","protein_coding",239,"A/T",0.7467,"deleterious_low_confidence(0.01)","benign(0.009)","missense",0.01,0.009,397,"9921G>A"]
[6311,"C>T","6311C>T",0.0390145614028131,0.0240601,0.0009387,527,171,28,4,0.962087990836833,250.191768007484,"KIA2","synonymous_variant","MT-CO1","protein_coding",136,"Y",0.86568,"-","-","synonymous","NA","NA",422,"NA"]
[16184,"C>A","16184C>A",0.17678957191181,0.0224928,3.9765E-3,158,62,35,26,0.979388851680782,250.657623947615,"KIA2","intergenic_variant","-","-","-","-",0.00078,"-","-","non-coding","NA","NA",443,"NA"]
[7830,"G>A","7830G>A",0.0463371723122624,0.0207245,0.0009603,462,127,37,4,0.969403134504677,256.742750233863,"KIA2","missense_variant","MT-CO2","protein_coding",82,"R/H",0.74878,"deleterious_low_confidence(0)","probably_damaging(0.995)","missense",0,0.995,468,"7830G>A"]
[15100,"C>T","15100C>T",0.066166435844395,0.0196937,1.3031E-3,328,140,52,6,0.979995582798542,269.135640785781,"KIA2","synonymous_variant","MT-CYB","protein_coding",118,"I",0.24289,"-","-","synonymous","NA","NA",489,"NA"]
[10367,"C>T","10367C>T",0.0761419019328734,0.0192841,0.0014683,315,117,41,9,0.97432898751321,228.138447146866,"KIA2","synonymous_variant","MT-ND3","protein_coding",103,"A",0.66464,"-","-","synonymous","NA","NA",494,"NA"]
[11018,"G>A","11018G>A",0.0838561681210166,0.0180625,0.0015147,325,132,43,5,0.967361042435156,268.426566884939,"KIA2","missense_variant","MT-ND4","protein_coding",87,"E/K",0.48739,"deleterious_low_confidence(0.01)","probably_damaging(0.988)","missense",0.01,0.988,519,"11018G>A"]
[10623,"C>T","10623C>T",0.0396244070712585,0.01735,0.0006875,394,102,23,0,0.955617700930315,245.159027128157,"KIA2","missense_variant","MT-ND4L","protein_coding",52,"H/Y",0.88995,"deleterious(0.03)","probably_damaging(0.914)","missense",0.03,0.914,540,"10623C>T"]
[12726,"C>T","12726C>T",0.0797034682322105,0.0164765,1.3132E-3,253,114,43,9,0.975067624660789,212.5659494855,"KIA2","synonymous_variant","MT-ND5","protein_coding",130,"I",0.94227,"-","-","synonymous","NA","NA",565,"NA"]
[11257,"C>T","11257C>T",0.0818910488120051,0.0157839,0.0012926,255,108,41,7,0.977816212286101,246.548175865295,"KIA2","synonymous_variant","MT-ND4","protein_coding",166,"Y",0.61923,"-","-","synonymous","NA","NA",586,"NA"]
[6172,"C>T","6172C>T",0.0478263539417091,0.0152135,0.0007276,316,92,24,2,0.971963171907322,265.384471468662,"KIA2","missense_variant","MT-CO1","protein_coding",90,"P/L",0.96427,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,611,"6172C>T"]
[6877,"C>T","6877C>T",0.0421446042890509,0.0149924,0.0006318,336,90,14,1,0.96323995884341,278.594013096352,"KIA2","missense_variant","MT-CO1","protein_coding",325,"A/V",0.83786,"deleterious_low_confidence(0)","probably_damaging(0.996)","missense",0,0.996,616,"6877C>T"]
[4882,"C>T","4882C>T",0.0790079248487287,0.0142748,1.1278E-3,203,100,37,8,0.968345634135212,205.310570626754,"KIA2","missense_variant","MT-ND2","protein_coding",138,"P/L",0.50471,"deleterious(0)","probably_damaging(1)","missense",0,1,637,"4882C>T"]
[15337,"C>T","15337C>T",0.093808997514913,0.0138091,0.0012954,226,95,43,8,0.985287451643245,301.722170252572,"KIA2","synonymous_variant","MT-CYB","protein_coding",197,"L",0.29709,"-","-","synonymous","NA","NA",662,"NA"]
[4360,"G>A","4360G>A",0.0524155137074796,0.0132731,0.0006957,242,92,18,1,0.958906549555886,207.908325537886,"KIA2","non_coding_transcript_exon_variant","MT-TQ","Mt_tRNA","-","-",0.49716,"-","-","non-coding","NA","NA",687,"NA"]
[5318,"C>T","5318C>T",0.044139807377726,0.0127805,5.641E-4,237,61,15,2,0.894593179283748,201.576239476146,"KIA2","synonymous_variant","MT-ND2","protein_coding",283,"A",0.19192,"-","-","synonymous","NA","NA",708,"NA"]
[8532,"C>T","8532C>T",0.0814197251514482,0.0124206,0.0010113,188,89,32,5,0.9758760033411,258.856875584659,"KIA2","synonymous_variant","MT-ATP6","protein_coding",2,"N",0.05872,"-","-","synonymous","NA","NA",733,"NA"]
[7112,"C>T","7112C>T",0.0445424285502662,0.0123795,0.0005514,251,74,17,0,0.963444934345807,252.159027128157,"KIA2","synonymous_variant","MT-CO1","protein_coding",403,"Y",0.69503,"-","-","synonymous","NA","NA",734,"NA"]
[1203,"C>T","1203C>T",0.0488499967659659,0.0120221,0.0005873,212,71,14,1,0.931713886094182,188.926099158092,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.72913,"-","-","non-coding","NA","NA",759,"NA"]
[8270,"C>T","8270C>T",0.0819205027983233,0.0115603,0.000947,176,64,31,5,0.966576058565813,237.984097287184,"KIA2","intergenic_variant","-","-","-","-",0.03404,"-","-","non-coding","NA","NA",784,"NA"]
[494,"C>A","494C>A",0.103213229578357,0.0113574,1.1722E-3,141,67,35,8,0.977463138499269,201.877455565949,"KIA2","intergenic_variant","-","-","-","-",6.28E-3,"-","-","non-coding","NA","NA",805,"NA"]
[10437,"G>A","10437G>A",0.0515116969614966,0.0110803,5.708E-4,169,70,18,0,0.917941494586316,158.296538821328,"KIA2","non_coding_transcript_exon_variant","MT-TR","Mt_tRNA","-","-",0.80029,"-","-","non-coding","NA","NA",828,"NA"]
[586,"G>A","586G>A",0.0461068771106256,0.010979,0.0005062,229,68,16,0,0.931152572914774,209.602432179607,"KIA2","non_coding_transcript_exon_variant","MT-TF","Mt_tRNA","-","-",0.211,"-","-","non-coding","NA","NA",836,"NA"]
[2498,"T>A","2498T>A",0.10175897707938,0.0106766,1.0864E-3,143,85,34,6,0.98042067720967,214.837231057063,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.93047,"-","-","non-coding","NA","NA",857,"NA"]
[9477,"G>T","9477G>T",0.0965447345585793,0.0104306,0.001007,147,52,25,6,0.985765550516753,235.239476145931,"KIA2","missense_variant","MT-CO3","protein_coding",91,"V/F",0.2766,"deleterious_low_confidence(0)","benign(0.121)","missense",0,0.121,882,"9477G>T"]
[6584,"C>T","6584C>T",0.067110332615936,0.0101899,0.0006838,202,79,20,1,0.974182566987787,276.598690364827,"KIA2","synonymous_variant","MT-CO1","protein_coding",227,"D",0.98298,"-","-","synonymous","NA","NA",903,"NA"]
[7108,"G>A","7108G>A",0.0452427375528738,0.0099446,0.0004499,224,57,13,0,0.946281927003205,258.21141253508,"KIA2","missense_variant","MT-CO1","protein_coding",402,"G/D",0.71836,"deleterious_low_confidence(0.01)","probably_damaging(1)","missense",0.01,1,928,"NA"]
[6077,"C>T","6077C>T",0.0614036090928796,0.0096795,0.0005944,176,56,16,3,0.954392619938915,196.956969130028,"KIA2","synonymous_variant","MT-CO1","protein_coding",58,"V",0.6425,"-","-","synonymous","NA","NA",953,"NA"]
[11665,"C>T","11665C>T",0.0385476911500913,0.0093436,0.0003602,228,49,6,0,0.960383696005451,282.531337698784,"KIA2","synonymous_variant","MT-ND4","protein_coding",302,"L",0.94843,"-","-","synonymous","NA","NA",974,"NA"]
[9247,"G>A","9247G>A",0.0676660039505376,0.0093303,6.313E-4,154,77,26,0,0.974490550368566,245.837231057063,"KIA2","missense_variant","MT-CO3","protein_coding",14,"S/N",0.82998,"deleterious_low_confidence(0.01)","possibly_damaging(0.891)","missense",0.01,0.891,979,"NA"]
[6600,"C>T","6600C>T",0.0573756447418961,0.0090704,0.0005204,191,46,14,1,0.966093384755756,254.32460243218,"KIA2","missense_variant","MT-CO1","protein_coding",233,"H/Y",0.99677,"deleterious_low_confidence(0)","probably_damaging(0.989)","missense",0,0.989,1000,"NA"]
[11642,"G>A","11642G>A",0.0412840956872034,0.0088302,0.0003645,193,51,8,0,0.9549869322238,250.119738072965,"KIA2","missense_variant","MT-ND4","protein_coding",295,"A/T",0.93578,"deleterious_low_confidence(0)","probably_damaging(0.995)","missense",0,0.995,1025,"NA"]
[8902,"G>A","8902G>A",0.0313064312000313,8.5261E-3,0.0002669,213,33,5,0,0.943029409310726,271.987839101964,"KIA2","missense_variant","MT-ATP6","protein_coding",126,"A/T",0.15641,"deleterious(0.02)","benign(0.02)","missense",0.02,0.02,1050,"NA"]
[1970,"G>A","1970G>A",0.0402990332303395,0.0082919,0.0003342,136,42,8,0,0.901824076158173,163.131898971001,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.55266,"-","-","non-coding","NA","NA",1071,"NA"]
[6386,"C>T","6386C>T",0.0313860563242121,0.0082841,0.00026,163,37,4,0,0.91543948413448,210.372310570627,"KIA2","synonymous_variant","MT-CO1","protein_coding",161,"A",0.81652,"-","-","synonymous","NA","NA",1076,"NA"]
[11669,"C>T","11669C>T",0.0395015067150895,0.0080607,0.0003184,203,44,5,1,0.964807765035594,285.601496725912,"KIA2","stop_gained","MT-ND4","protein_coding",304,"Q/*",0.96041,"-","-","truncating","NA","NA",1101,"NA"]
[3563,"G>A","3563G>A",0.031942716166998,0.0079426,0.0002537,168,28,5,0,0.926197194880385,211.291861552853,"KIA2","stop_gained","MT-ND1","protein_coding",86,"W/*",0.41934,"-","-","truncating","NA","NA",1122,"NA"]
[3077,"C>T","3077C>T",0.0323485538820215,0.0077276,0.00025,149,38,2,0,0.909541940394929,193.442469597755,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.92694,"-","-","non-coding","NA","NA",1147,"NA"]
[12390,"C>T","12390C>T",0.0452589588538172,0.0074885,3.389E-4,160,26,7,1,0.944315920221709,245.340505144995,"KIA2","synonymous_variant","MT-ND5","protein_coding",18,"P",0.28363,"-","-","synonymous","NA","NA",1168,"NA"]
[5049,"C>T","5049C>T",0.0675992552183044,0.0073556,0.0004972,81,50,20,2,0.920915438591362,121.834424695978,"KIA2","synonymous_variant","MT-ND2","protein_coding",194,"L",0.5819,"-","-","synonymous","NA","NA",1193,"NA"]
[6568,"C>T","6568C>T",0.0386204600170275,0.0073105,0.0002823,174,29,6,0,0.9700079976136,262.189897100094,"KIA2","missense_variant","MT-CO1","protein_coding",222,"P/L",0.94719,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,1198,"NA"]
[9897,"C>T","9897C>T",0.0619870193816053,7.1801E-3,0.0004451,160,31,8,3,0.982759509393602,293.6604303087,"KIA2","missense_variant","MT-CO3","protein_coding",231,"H/Y",0.42411,"deleterious_low_confidence(0.01)","probably_damaging(0.967)","missense",0.01,0.967,1219,"NA"]
[14958,"G>A","14958G>A",0.0349712494366795,0.0070107,2.452E-4,162,39,3,0,0.974736705832684,288.081384471469,"KIA2","missense_variant","MT-CYB","protein_coding",71,"R/Q",0.33846,"deleterious_low_confidence(0.01)","probably_damaging(0.978)","missense",0.01,0.978,1244,"NA"]
[6264,"G>A","6264G>A",0.0478210108975673,0.0068565,3.279E-4,136,39,9,0,0.950916268618721,217.474275023386,"KIA2","stop_gained","MT-CO1","protein_coding",121,"G/*",0.39308,"-","-","truncating","NA","NA",1265,"NA"]
[9548,"G>A","9548G>A",0.0405387916970265,0.0067021,0.0002717,149,34,6,0,0.962389433053464,269.942001870907,"KIA2","synonymous_variant","MT-CO3","protein_coding",114,"G",0.27557,"-","-","synonymous","NA","NA",1290,"NA"]
[12192,"G>A","12192G>A",0.0524133328162895,0.006592,3.455E-4,135,48,11,0,0.93752610701707,248.478016838167,"KIA2","non_coding_transcript_exon_variant","MT-TH","Mt_tRNA","-","-",0.21365,"-","-","non-coding","NA","NA",1306,"NA"]
[12889,"G>A","12889G>A",0.031035120651119,0.0065133,0.0002021,152,24,3,0,0.916753267153607,240.855004677268,"KIA2","missense_variant","MT-ND5","protein_coding",185,"A/T",0.41653,"tolerated_low_confidence(0.53)","benign(0.041)","missense",0.53,0.041,1317,"NA"]
[4379,"C>T","4379C>T",0.0350624825809666,0.0063514,0.0002227,127,23,4,0,0.938032417216823,202.66230121609,"KIA2","non_coding_transcript_exon_variant","MT-TQ","Mt_tRNA","-","-",0.23568,"-","-","non-coding","NA","NA",1342,"NA"]
[15679,"A>T","15679A>T",0.058430377862471,0.0061365,0.0003586,119,38,9,1,0.957555129804702,222.409728718428,"KIA2","missense_variant","MT-CYB","protein_coding",311,"K/N",0.13534,"tolerated_low_confidence(0.06)","probably_damaging(0.998)","missense",0.06,0.998,1367,"NA"]
[1339,"G>A","1339G>A",0.0565578889005753,0.006024,0.0003407,102,33,8,1,0.973319125897671,237.125350795136,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.72307,"-","-","non-coding","NA","NA",1388,"NA"]
[14040,"G>A","14040G>A",0.0279361015768393,0.0058884,0.0001645,157,18,1,0,0.927305786286751,267.843779232928,"KIA2","synonymous_variant","MT-ND5","protein_coding",568,"Q",0.14624,"-","-","synonymous","NA","NA",1413,"NA"]
[7896,"G>A","7896G>A",0.0346207728288312,0.0057726,0.0001999,141,26,3,0,0.961888007994568,270.140318054256,"KIA2","stop_gained","MT-CO2","protein_coding",104,"W/*",0.79287,"-","-","truncating","NA","NA",1434,"NA"]
[1949,"G>A","1949G>A",0.0239775902597018,0.0057539,0.000138,105,13,0,0,0.858453578170148,190.216089803555,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.50993,"-","-","non-coding","NA","NA",1439,"NA"]
[6318,"C>T","6318C>T",0.0537394656936709,0.0056163,0.0003018,94,28,10,1,0.979809968300785,243.013096351731,"KIA2","missense_variant","MT-CO1","protein_coding",139,"P/S",0.82027,"tolerated_low_confidence(0.59)","possibly_damaging(0.469)","missense",0.59,0.469,1464,"NA"]
[10963,"A>T","10963A>T",0.0630875907999369,0.0055379,0.0003494,95,41,9,0,0.922818887143837,234.625818521983,"KIA2","synonymous_variant","MT-ND4","protein_coding",68,"L",0.98992,"-","-","synonymous","NA","NA",1485,"NA"]
[11910,"C>T","11910C>T",0.0343924101005778,0.0054232,0.0001865,131,19,3,0,0.91990119362882,240.625818521983,"KIA2","missense_variant","MT-ND4","protein_coding",384,"T/I",0.81049,"deleterious_low_confidence(0)","benign(0.134)","missense",0,0.134,1510,"NA"]
[4436,"C>T","4436C>T",0.0382151714161782,0.005325,0.0002035,105,27,5,0,0.946542099262832,208.173058933583,"KIA2","non_coding_transcript_exon_variant","MT-TM","Mt_tRNA","-","-",0.87772,"-","-","non-coding","NA","NA",1535,"NA"]
[3538,"G>A","3538G>A",0.0434335308430804,0.0053137,2.308E-4,107,26,6,0,0.962440160254399,249.106641721235,"KIA2","missense_variant","MT-ND1","protein_coding",78,"A/T",0.36215,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,1536,"NA"]
[3736,"G>A","3736G>A",0.0547225770472551,0.0052323,0.0002863,100,25,4,1,0.92558694814024,193.44340505145,"KIA2","missense_variant","MT-ND1","protein_coding",144,"V/I",0.34299,"deleterious_low_confidence(0.04)","benign(0.033)","missense",0.04,0.033,1561,"NA"]
[5945,"C>T","5945C>T",0.0689191872310731,0.0051635,0.0003559,80,37,10,1,0.952053501460515,183.159962581852,"KIA2","synonymous_variant","MT-CO1","protein_coding",14,"D",0.93618,"-","-","synonymous","NA","NA",1582,"NA"]
[3877,"G>A","3877G>A",0.0520502371026694,0.0050787,0.0002643,93,32,5,0,0.950987545499221,219.374181478017,"KIA2","missense_variant","MT-ND1","protein_coding",191,"A/T",0.84042,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,1607,"NA"]
[12483,"C>T","12483C>T",0.0339021889569111,0.0049975,1.694E-4,122,20,2,0,0.896521302868275,248.016838166511,"KIA2","synonymous_variant","MT-ND5","protein_coding",49,"F",0.47154,"-","-","synonymous","NA","NA",1632,"NA"]
[6368,"C>T","6368C>T",0.0463141603266972,0.0049047,0.0002272,85,24,3,1,0.951336710590189,214.568755846586,"KIA2","synonymous_variant","MT-CO1","protein_coding",155,"V",0.62291,"-","-","synonymous","NA","NA",1653,"NA"]
[3239,"G>A","3239G>A",0.0799428985956297,0.00489,0.0003909,71,34,8,2,0.97784375841934,229.367633302152,"KIA2","non_coding_transcript_exon_variant","MT-TL1","Mt_tRNA","-","-",0.8483,"-","-","non-coding","NA","NA",1658,"NA"]
[8684,"C>T","8684C>T",0.0401098145590282,0.00482,0.0001933,102,28,3,0,0.895356812559739,211.544434050514,"KIA2","missense_variant","MT-ATP6","protein_coding",53,"T/I",0.01841,"tolerated(0.67)","benign(0.005)","missense",0.67,0.005,1679,"NA"]
[8980,"C>T","8980C>T",0.0403466831746606,0.0047351,0.000191,115,17,5,0,0.962085266068093,266.503274087933,"KIA2","stop_gained","MT-ATP6","protein_coding",152,"Q/*",0.02722,"-","-","truncating","NA","NA",1704,"NA"]
[9544,"G>A","9544G>A",0.030071938736452,0.0046742,1.406E-4,133,17,2,0,0.925182763174867,284.78671655753,"KIA2","missense_variant","MT-CO3","protein_coding",113,"G/E",0.26172,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,1729,"NA"]
[8455,"C>T","8455C>T",0.0317916337574345,4.6051E-3,0.0001464,84,20,0,0,0.798608751522962,194.196445275959,"KIA2","synonymous_variant","MT-ATP8","protein_coding",30,"N",0.04237,"-","-","synonymous","NA","NA",1750,"NA"]
[10406,"G>A","10406G>A",0.119619907456967,0.0045432,0.0005435,61,40,17,2,0.946151459927403,190.665107577175,"KIA2","non_coding_transcript_exon_variant","MT-TR","Mt_tRNA","-","-",0.64265,"-","-","non-coding","NA","NA",1775,"NA"]
[6366,"G>A","6366G>A",0.0294414269006657,0.0045252,0.0001332,100,17,1,0,0.887707456799968,214.161833489242,"KIA2","missense_variant","MT-CO1","protein_coding",155,"V/I",0.56675,"tolerated_low_confidence(0.8)","benign(0)","missense",0.8,0,1784,"NA"]
[8276,"C>T","8276C>T",0.0557994969054315,0.0044867,0.0002504,81,21,6,0,0.948179117410141,228.302151543499,"KIA2","intergenic_variant","-","-","-","-",0.02686,"-","-","non-coding","NA","NA",1802,"NA"]
[15173,"G>A","15173G>A",0.0462726271027158,0.0044213,0.0002046,88,24,5,0,0.965079412196545,238.237605238541,"KIA2","missense_variant","MT-CYB","protein_coding",143,"A/T",0.61181,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,1827,"NA"]
[4919,"C>A","4919C>A",0.0319754626706311,0.0043604,1.394E-4,94,15,1,0,0.818759512859363,194.366697848457,"KIA2","missense_variant","MT-ND2","protein_coding",150,"N/K",0.19708,"deleterious(0)","possibly_damaging(0.812)","missense",0,0.812,1848,"NA"]
[2700,"G>A","2700G>A",0.0427210417141135,0.0042719,0.0001825,76,21,5,0,0.9692832566168,217.882132834425,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.67101,"-","-","non-coding","NA","NA",1873,"NA"]
[10346,"C>T","10346C>T",0.0377858148663202,4.2429E-3,0.0001603,65,15,4,0,0.928646327103815,189.388213283442,"KIA2","synonymous_variant","MT-ND3","protein_coding",96,"I",0.174,"-","-","synonymous","NA","NA",1878,"NA"]
[11936,"C>T","11936C>T",0.0511499533009955,0.0041979,0.0002147,97,21,4,1,0.939627806582947,225.736202057998,"KIA2","missense_variant","MT-ND4","protein_coding",393,"L/F",0.50033,"deleterious_low_confidence(0)","benign(0.077)","missense",0,0.077,1899,"NA"]
[4029,"C>T","4029C>T",0.0417709787900129,0.0041322,0.0001726,73,20,4,0,0.912515144897947,175.44714686623,"KIA2","synonymous_variant","MT-ND1","protein_coding",241,"I",0.4634,"-","-","synonymous","NA","NA",1924,"NA"]
[8512,"A>T","8512A>T",0.0400029382021623,0.0040794,0.0001632,89,16,4,0,0.976804031108512,278.615528531338,"KIA2","missense_variant","MT-ATP8","protein_coding",49,"K/N",0.03,"tolerated(0.82)","probably_damaging(0.987)","missense",0.82,0.987,1949,"NA"]
[6480,"G>A","6480G>A",0.0260472553730249,0.0040368,0.0001051,97,12,0,0,0.891916341933673,231.038353601497,"KIA2","missense_variant","MT-CO1","protein_coding",193,"V/I",0.48711,"tolerated_low_confidence(0.88)","benign(0)","missense",0.88,0,1970,"NA"]
[13523,"T>C","13523T>C",0.0566768782582886,0.0039733,2.252E-4,83,22,7,1,0.960388589876943,255.681945743686,"KIA2","missense_variant","MT-ND5","protein_coding",396,"I/T",0.50546,"deleterious_low_confidence(0)","probably_damaging(0.99)","missense",0,0.99,1995,"NA"]
[11306,"G>A","11306G>A",0.0222463688303524,0.003915,{"v":8.71e-05,"d":"8.71E-05"},103,9,1,0,0.933574363759835,260.921421889616,"KIA2","missense_variant","MT-ND4","protein_coding",183,"A/T",0.89468,"tolerated_low_confidence(0.94)","benign(0.177)","missense",0.94,0.177,2016,"NA"]
[3562,"T>C","3562T>C",0.055108788015918,0.003899,0.0002149,65,15,6,0,0.942250807859597,209.212347988775,"KIA2","missense_variant","MT-ND1","protein_coding",86,"W/R",0.41753,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,2021,"NA"]
[7157,"C>T","7157C>T",0.0575517052686522,0.0038316,0.0002205,83,15,6,1,0.976265215231964,277.592142188962,"KIA2","synonymous_variant","MT-CO1","protein_coding",418,"F",0.29751,"-","-","synonymous","NA","NA",2046,"NA"]
[1955,"G>A","1955G>A",0.031754610437858,0.0037836,0.0001201,77,17,1,0,0.826799910254605,183.4527595884,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.51123,"-","-","non-coding","NA","NA",2067,"NA"]
[7863,"C>T","7863C>T",0.0376991510496218,0.0037205,1.403E-4,88,10,3,1,0.960723007993673,269.532273152479,"KIA2","missense_variant","MT-CO2","protein_coding",93,"P/L",0.48576,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,2092,"NA"]
[3851,"C>T","3851C>T",0.0260477920468114,3.6795E-3,{"v":9.58e-05,"d":"9.58E-05"},71,9,1,0,0.920671397852301,201.861552853134,"KIA2","missense_variant","MT-ND1","protein_coding",182,"A/V",0.67484,"deleterious_low_confidence(0)","benign(0.35)","missense",0,0.35,2113,"NA"]
[8726,"C>T","8726C>T",0.0975259116315478,3.673E-3,0.0003582,40,22,8,2,0.965395411119113,187.958840037418,"KIA2","missense_variant","MT-ATP6","protein_coding",67,"T/I",0.13211,"deleterious(0.01)","benign(0.393)","missense",0.01,0.393,2118,"NA"]
[12239,"C>T","12239C>T",0.0335414014105161,0.003619,1.214E-4,76,13,2,0,0.892750110587206,229.795135640786,"KIA2","non_coding_transcript_exon_variant","MT-TS2","Mt_tRNA","-","-",0.26661,"-","-","non-coding","NA","NA",2143,"NA"]
[9749,"C>T","9749C>T",0.048370893177421,0.003587,0.0001735,69,20,5,0,0.949037593321556,259.489242282507,"KIA2","synonymous_variant","MT-CO3","protein_coding",181,"Y",0.25161,"-","-","synonymous","NA","NA",2164,"NA"]
[16361,"G>A","16361G>A",0.0305387139631684,0.00355,0.0001084,76,9,1,0,0.930792175404774,212.386342376052,"KIA2","intergenic_variant","-","-","-","-",0.13736,"-","-","non-coding","NA","NA",2189,"NA"]
[4860,"C>T","4860C>T",0.0468905651336556,3.4922E-3,1.638E-4,75,18,4,0,0.958016072895357,240.01122544434,"KIA2","missense_variant","MT-ND2","protein_coding",131,"L/F",0.83735,"deleterious(0)","probably_damaging(1)","missense",0,1,2214,"NA"]
[8052,"C>T","8052C>T",0.0391819606310718,3.4513E-3,0.0001352,73,13,3,0,0.9471254358604,230.655753040225,"KIA2","missense_variant","MT-CO2","protein_coding",156,"S/L",0.95486,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,2235,"NA"]
[11246,"G>A","11246G>A",0.0405605583761034,3.4394E-3,1.395E-4,62,15,4,0,0.933424370453243,234.717492984097,"KIA2","missense_variant","MT-ND4","protein_coding",163,"A/T",0.55127,"tolerated_low_confidence(0.07)","probably_damaging(0.995)","missense",0.07,0.995,2240,"NA"]
[1462,"G>A","1462G>A",0.055799132151357,0.0034079,0.0001902,60,18,6,0,0.941424075175673,212.734331150608,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.69295,"-","-","non-coding","NA","NA",2266,"NA"]
[8794,"C>T","8794C>T",0.0388480851347523,0.0033543,1.303E-4,68,9,2,1,0.964807447089384,240.674462114125,"KIA2","missense_variant","MT-ATP6","protein_coding",90,"H/Y",0.15215,"tolerated(1)","benign(0.003)","missense",1,0.003,2287,"NA"]
[3852,"C>T","3852C>T",0.0286964901782224,3.3054E-3,{"v":9.49e-05,"d":"9.49E-05"},69,11,1,0,0.907575719500638,197.253507951356,"KIA2","synonymous_variant","MT-ND1","protein_coding",182,"A",0.67427,"-","-","synonymous","NA","NA",2312,"NA"]
[9391,"C>T","9391C>T",0.0282877365401516,3.2737E-3,{"v":9.26e-05,"d":"9.26E-05"},81,7,1,0,0.932772120802552,250.314312441534,"KIA2","missense_variant","MT-CO3","protein_coding",62,"T/M",0.87169,"deleterious_low_confidence(0.02)","benign(0.001)","missense",0.02,1E-3,2333,"NA"]
[3321,"C>T","3321C>T",0.0266282380649709,0.0032635,{"v":8.69e-05,"d":"8.69E-05"},40,8,0,0,0.778562710256962,172.843779232928,"KIA2","synonymous_variant","MT-ND1","protein_coding",5,"N",0.10227,"-","-","synonymous","NA","NA",2338,"NA"]
[12205,"C>T","12205C>T",0.0513306724947872,0.0032267,0.0001656,59,18,4,0,0.970511148022501,246.131898971001,"KIA2","non_coding_transcript_exon_variant","MT-TH","Mt_tRNA","-","-",0.41164,"-","-","non-coding","NA","NA",2359,"NA"]
[13545,"C>T","13545C>T",0.0348933099987849,0.0032021,1.117E-4,73,15,1,0,0.949693132457942,265.553788587465,"KIA2","synonymous_variant","MT-ND5","protein_coding",403,"Y",0.65381,"-","-","synonymous","NA","NA",2384,"NA"]
[2545,"T>A","2545T>A",0.0871875692676769,0.0031712,2.765E-4,45,30,10,0,0.931459126741451,186.137511693171,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.83219,"-","-","non-coding","NA","NA",2409,"NA"]
[15668,"C>T","15668C>T",0.0363439964343444,0.0031325,1.138E-4,72,13,1,0,0.935722023073383,238.603367633302,"KIA2","missense_variant","MT-CYB","protein_coding",308,"H/Y",0.05806,"deleterious_low_confidence(0.02)","probably_damaging(0.992)","missense",0.02,0.992,2430,"NA"]
[5202,"C>T","5202C>T",0.0292429407431797,0.0030886,{"v":9.03e-05,"d":"9.03E-05"},53,10,0,0,0.863118628514197,193.234798877456,"KIA2","missense_variant","MT-ND2","protein_coding",245,"P/S",0.145,"tolerated(0.14)","benign(0.018)","missense",0.14,0.018,2455,"NA"]
[4959,"G>A","4959G>A",0.0721203415716808,0.0030825,0.0002223,37,19,7,1,0.959051709718124,185.420954162769,"KIA2","missense_variant","MT-ND2","protein_coding",164,"A/T",0.37643,"tolerated(0.07)","benign(0.027)","missense",0.07,0.027,2460,"NA"]
[1271,"C>T","1271C>T",0.0276524429107039,0.0030402,{"v":8.41e-05,"d":"8.41E-05"},70,10,0,0,0.906487685169757,216.926099158092,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.71124,"-","-","non-coding","NA","NA",2481,"NA"]
[3322,"C>T","3322C>T",0.0388371876414767,0.0030029,1.166E-4,37,8,4,0,0.839583928599421,180.054256314312,"KIA2","missense_variant","MT-ND1","protein_coding",6,"L/F",0.09584,"tolerated_low_confidence(0.08)","possibly_damaging(0.826)","missense",0.08,0.826,2506,"NA"]
[12906,"C>T","12906C>T",0.0278679553298476,0.0029715,{"v":8.28e-05,"d":"8.28E-05"},62,7,1,0,0.945647877584497,268.847521047708,"KIA2","synonymous_variant","MT-ND5","protein_coding",190,"I",0.2454,"-","-","synonymous","NA","NA",2527,"NA"]
[6222,"C>T","6222C>T",0.0294507945473515,0.0029435,{"v":8.67e-05,"d":"8.67E-05"},54,7,1,0,0.923729199768474,221.824134705332,"KIA2","missense_variant","MT-CO1","protein_coding",107,"P/S",0.80427,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,2552,"NA"]
[8803,"A>T","8803A>T",0.032085595239507,2.9129E-3,{"v":9.35e-05,"d":"9.35E-05"},62,6,2,0,0.952160804187238,246.958840037418,"KIA2","missense_variant","MT-ATP6","protein_coding",93,"T/S",0.12937,"deleterious(0)","probably_damaging(0.988)","missense",0,0.988,2577,"NA"]
[5460,"G>A","5460G>A",0.0285812104944357,0.0029128,{"v":8.33e-05,"d":"8.33E-05"},48,8,1,0,0.867117414715812,178.56033676333,"KIA2","missense_variant","MT-ND2","protein_coding",331,"A/T",0.23484,"tolerated(0.38)","benign(0)","missense",0.38,0,2578,"NA"]
[12991,"G>A","12991G>A",0.0493612339716034,0.0028771,0.000142,90,7,2,1,0.968734603735009,315.387277829747,"KIA2","missense_variant","MT-ND5","protein_coding",219,"A/T",0.93835,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,2603,"NA"]
[8599,"C>T","8599C>T",0.044455522521119,0.0028459,0.0001265,46,15,2,0,0.907167291065199,229.764265668849,"KIA2","synonymous_variant","MT-ATP6","protein_coding",25,"L",0.04309,"-","-","synonymous","NA","NA",2628,"NA"]
[6730,"C>A","6730C>A",0.0441940995074337,0.0028215,1.247E-4,53,17,2,0,0.961410710432719,228.765201122544,"KIA2","missense_variant","MT-CO1","protein_coding",276,"A/D",0.85171,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,2649,"NA"]
[6420,"C>T","6420C>T",0.0228742129736473,0.0027845,{"v":6.37e-05,"d":"6.37E-05"},60,4,1,0,0.880783250389628,228.10944808232,"KIA2","missense_variant","MT-CO1","protein_coding",173,"P/S",0.71181,"tolerated_low_confidence(0.48)","probably_damaging(0.999)","missense",0.48,0.999,2674,"NA"]
[8281,"C>T","8281C>T",0.029471191020402,2.7645E-3,{"v":8.15e-05,"d":"8.15E-05"},53,9,1,0,0.91924263973602,228.410664172123,"KIA2","intergenic_variant","-","-","-","-",0.03597,"-","-","non-coding","NA","NA",2695,"NA"]
[9318,"C>T","9318C>T",0.0252528363736212,0.0027559,{"v":6.96e-05,"d":"6.96E-05"},83,5,1,0,0.901163573484669,267.816651075772,"KIA2","missense_variant","MT-CO3","protein_coding",38,"H/Y",0.06904,"tolerated_low_confidence(0.21)","benign(0)","missense",0.21,0,2700,"NA"]
[10662,"G>A","10662G>A",0.0338433746695268,0.0027262,{"v":9.23e-05,"d":"9.23E-05"},79,14,0,0,0.961085424868662,310.531337698784,"KIA2","missense_variant","MT-ND4L","protein_coding",65,"V/I",0.85358,"deleterious(0.05)","benign(0.127)","missense",0.05,0.127,2725,"NA"]
[1682,"C>T","1682C>T",0.0401498456503349,2.6917E-3,1.081E-4,59,10,4,0,0.897255475460527,212.690364826941,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.22886,"-","-","non-coding","NA","NA",2744,"NA"]
[8106,"C>T","8106C>T",0.0287153475556517,0.002667,{"v":7.66e-05,"d":"7.66E-05"},56,6,2,0,0.892579356527348,240.263797942002,"KIA2","missense_variant","MT-CO2","protein_coding",174,"A/V",0.86291,"deleterious_low_confidence(0)","probably_damaging(0.993)","missense",0,0.993,2772,"NA"]
[4558,"G>A","4558G>A",0.0435736933528652,0.0026353,1.148E-4,53,12,1,0,0.96450231444527,205.527595884004,"KIA2","stop_gained","MT-ND2","protein_coding",30,"W/*",0.7486,"-","-","truncating","NA","NA",2793,"NA"]
[10877,"C>T","10877C>T",0.031795291064273,0.0025987,{"v":8.26e-05,"d":"8.26E-05"},58,7,2,0,0.926463628562035,243.34331150608,"KIA2","synonymous_variant","MT-ND4","protein_coding",40,"L",0.63643,"-","-","synonymous","NA","NA",2818,"NA"]
[11730,"C>T","11730C>T",0.0274611370145453,0.0025938,{"v":7.12e-05,"d":"7.12E-05"},61,9,0,0,0.95760450687052,265.799812909261,"KIA2","missense_variant","MT-ND4","protein_coding",324,"S/L",0.84311,"deleterious_low_confidence(0)","probably_damaging(0.985)","missense",0,0.985,2823,"NA"]
[6653,"C>T","6653C>T",0.0278002124027364,2.5585E-3,{"v":7.11e-05,"d":"7.11E-05"},47,7,0,0,0.883441966750963,216.815715622077,"KIA2","synonymous_variant","MT-CO1","protein_coding",250,"G",0.92945,"-","-","synonymous","NA","NA",2844,"NA"]
[3942,"C>T","3942C>T",0.10031795271042,0.0025308,0.0002539,41,8,4,3,0.982626035513493,229.906454630496,"KIA2","synonymous_variant","MT-ND1","protein_coding",212,"N",0.75478,"-","-","synonymous","NA","NA",2869,"NA"]
[3568,"C>T","3568C>T",0.0222538855267223,0.0025017,{"v":5.57e-05,"d":"5.57E-05"},48,4,0,0,0.810856162989472,200.427502338634,"KIA2","missense_variant","MT-ND1","protein_coding",88,"P/S",0.40527,"deleterious_low_confidence(0)","probably_damaging(1)","missense",0,1,2894,"NA"]
[15049,"C>G","15049C>G",0.0497646667705056,0.002478,0.0001233,21,9,2,1,0.9637325508659,240.470533208606,"KIA2","synonymous_variant","MT-CYB","protein_coding",101,"G",0.3955,"-","-","synonymous","NA","NA",2915,"NA"]
[12632,"C>T","12632C>T",0.0295434411357451,0.0024736,{"v":7.31e-05,"d":"7.31E-05"},41,7,0,0,0.719152981438548,181.521047708138,"KIA2","missense_variant","MT-ND5","protein_coding",99,"S/F",0.57535,"deleterious_low_confidence(0)","possibly_damaging(0.868)","missense",0,0.868,2920,"NA"]
[12708,"C>T","12708C>T",0.0433729327246083,0.0024473,1.061E-4,45,16,1,0,0.934662562192409,191.88306828812,"KIA2","synonymous_variant","MT-ND5","protein_coding",124,"F",0.8314,"-","-","synonymous","NA","NA",2941,"NA"]
[7964,"T>C","7964T>C",0.0261935807886178,0.0024162,{"v":6.33e-05,"d":"6.33E-05"},44,7,0,0,0.934712352019568,244.685687558466,"KIA2","missense_variant","MT-CO2","protein_coding",127,"F/L",0.20249,"deleterious_low_confidence(0.01)","probably_damaging(0.99)","missense",0.01,0.99,2966,"NA"]
[1661,"A>G","1661A>G",0.0590681938050497,0.0023895,0.0001411,44,17,3,0,0.922588870900041,204.359214218896,"KIA2","non_coding_transcript_exon_variant","MT-TV","Mt_tRNA","-","-",0.31849,"-","-","non-coding","NA","NA",2991,"NA"]
[7500,"C>T","7500C>T",0.0396420694641572,0.0023711,{"v":9.4e-05,"d":"9.40E-05"},36,6,3,0,0.9449850933584,241.054256314312,"KIA2","non_coding_transcript_exon_variant","MT-TS1","Mt_tRNA","-","-",0.44414,"-","-","non-coding","NA","NA",3012,"NA"]
[13938,"C>T","13938C>T",0.0398925946303355,0.0023442,{"v":9.35e-05,"d":"9.35E-05"},49,14,1,0,0.940932278541392,267.367633302152,"KIA2","synonymous_variant","MT-ND5","protein_coding",534,"H",0.22524,"-","-","synonymous","NA","NA",3037,"NA"]
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[16329,"G>A","16329G>A",0.0308935280075013,0.0018933,{"v":5.85e-05,"d":"5.85E-05"},28,6,1,0,0.937336634218428,182.815715622077,"KIA2","intergenic_variant","-","-","-","-",0.0551,"-","-","non-coding","NA","NA",3594,"NA"]
[2219,"C>T","2219C>T",0.0296171496876841,0.0018773,{"v":5.56e-05,"d":"5.56E-05"},38,7,0,0,0.930725735762084,208.287184284378,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.21474,"-","-","non-coding","NA","NA",3619,"NA"]
[16244,"G>A","16244G>A",0.0242381368926661,1.877E-3,{"v":4.55e-05,"d":"4.55E-05"},39,5,0,0,0.845596188225142,248.188961646398,"KIA2","intergenic_variant","-","-","-","-",0.03682,"-","-","non-coding","NA","NA",3620,"NA"]
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[14472,"C>T","14472C>T",0.034650466306665,1.8406E-3,{"v":6.38e-05,"d":"6.38E-05"},36,7,0,0,0.90602738734091,203.799812909261,"KIA2","stop_gained","MT-ND6","protein_coding",68,"G/*",0.71269,"-","-","truncating","NA","NA",3670,"NA"]
[12759,"C>T","12759C>T",0.038566586326323,0.0018317,{"v":7.06e-05,"d":"7.06E-05"},36,5,2,0,0.970269862381904,247.686623012161,"KIA2","synonymous_variant","MT-ND5","protein_coding",141,"F",0.89263,"-","-","synonymous","NA","NA",3686,"NA"]
[12907,"C>T","12907C>T",0.0234722532739444,0.0018091,{"v":4.25e-05,"d":"4.25E-05"},39,3,0,0,0.925018511878176,270.950420954163,"KIA2","synonymous_variant","MT-ND5","protein_coding",191,"L",0.25195,"-","-","synonymous","NA","NA",3717,"NA"]
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[13034,"T>C","13034T>C",0.0175537061333955,1.7902E-3,{"v":3.14e-05,"d":"3.14E-05"},24,4,0,0,0.840101207647118,271.192703461179,"KIA2","missense_variant","MT-ND5","protein_coding",233,"L/P",0.95528,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,3743,"NA"]
[9294,"G>A","9294G>A",0.0412071224841506,1.7733E-3,{"v":7.31e-05,"d":"7.31E-05"},51,7,2,0,0.952532070604103,302.277829747428,"KIA2","missense_variant","MT-CO3","protein_coding",30,"G/S",0.23112,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,3768,"NA"]
[14230,"A>G","14230A>G",0.0467843873186805,1.7637E-3,{"v":8.25E-5,"d":"8.25E-05"},32,10,1,0,0.906029073357166,237.086997193639,"KIA2","synonymous_variant","MT-ND6","protein_coding",148,"Y",0.42356,"-","-","synonymous","NA","NA",3789,"NA"]
[3040,"G>A","3040G>A",0.03455474777825,0.0017463,{"v":6.03e-05,"d":"6.03E-05"},30,10,0,0,0.898225589529486,201.409728718428,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.98051,"-","-","non-coding","NA","NA",3814,"NA"]
[6647,"A>T","6647A>T",0.0433131459283671,0.0017336,{"v":7.51e-05,"d":"7.51E-05"},28,6,3,0,0.945713258035033,221.77174929841,"KIA2","synonymous_variant","MT-CO1","protein_coding",248,"L",0.96976,"-","-","synonymous","NA","NA",3839,"NA"]
[10213,"C>T","10213C>T",0.0292164738800748,0.0017165,{"v":5.01e-05,"d":"5.01E-05"},41,4,1,0,0.928064517488859,251.783910196445,"KIA2","missense_variant","MT-ND3","protein_coding",52,"S/F",0.80925,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,3860,"NA"]
[2182,"G>A","2182G>A",0.0217842690823416,0.0017138,{"v":3.73e-05,"d":"3.73E-05"},19,4,0,0,0.745106197650857,194.863423760524,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.56799,"-","-","non-coding","NA","NA",3865,"NA"]
[2692,"G>A","2692G>A",0.0745110988408778,0.0016989,0.0001266,20,14,5,0,0.96911542060056,226.852198316183,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.74814,"-","-","non-coding","NA","NA",3886,"NA"]
[237,"A>T","237A>T",0.0575597352972062,1.6876E-3,{"v":9.71e-05,"d":"9.71E-05"},24,10,2,0,0.869822784348459,149.10944808232,"KIA2","intergenic_variant","-","-","-","-",0.05323,"-","-","non-coding","NA","NA",3911,"NA"]
[1200,"G>A","1200G>A",0.0338694192616262,1.6737E-3,{"v":5.67e-05,"d":"5.67E-05"},24,8,0,0,0.916311080202546,202.331150608045,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.70062,"-","-","non-coding","NA","NA",3936,"NA"]
[13371,"C>T","13371C>T",0.0187614136388749,0.0016633,{"v":3.12e-05,"d":"3.12E-05"},36,1,0,0,0.813935525118056,218.772684752105,"KIA2","synonymous_variant","MT-ND5","protein_coding",345,"S",0.6307,"-","-","synonymous","NA","NA",3957,"NA"]
[13922,"A>T","13922A>T",0.0549882002852625,0.0016624,{"v":9.14e-05,"d":"9.14E-05"},30,11,2,0,0.968622600166754,247.595884003742,"KIA2","missense_variant","MT-ND5","protein_coding",529,"Y/F",0.22723,"tolerated_low_confidence(1)","probably_damaging(0.994)","missense",1,0.994,3962,"NA"]
[3954,"C>T","3954C>T",0.0328153505926542,1.6485E-3,{"v":5.41E-5,"d":"5.41E-05"},37,5,1,0,0.898824397616518,234.921421889616,"KIA2","synonymous_variant","MT-ND1","protein_coding",216,"A",0.82932,"-","-","synonymous","NA","NA",3987,"NA"]
[1489,"G>A","1489G>A",0.0182049692373232,1.639E-3,{"v":2.98e-05,"d":"2.98E-05"},28,1,0,0,0.742145410761365,217.45463049579,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.841,"-","-","non-coding","NA","NA",4008,"NA"]
[6491,"C>T","6491C>T",0.0223370795528382,0.001626,{"v":3.63e-05,"d":"3.63E-05"},37,2,0,0,0.90871341969451,245.084190832554,"KIA2","synonymous_variant","MT-CO1","protein_coding",196,"L",0.56732,"-","-","synonymous","NA","NA",4033,"NA"]
[3099,"C>T","3099C>T",0.0274464929300006,1.6087E-3,{"v":4.42e-05,"d":"4.42E-05"},25,3,1,0,0.875243711650239,197.126286248831,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.68459,"-","-","non-coding","NA","NA",4054,"NA"]
[14359,"C>T","14359C>T",0.0266199083357079,0.0015982,{"v":4.25e-05,"d":"4.25E-05"},41,6,0,0,0.928490455372877,272.172123479888,"KIA2","synonymous_variant","MT-ND6","protein_coding",105,"W",0.57713,"-","-","synonymous","NA","NA",4079,"NA"]
[9777,"G>A","9777G>A",0.0371987425293319,1.5953E-3,{"v":5.93e-05,"d":"5.93E-05"},29,9,1,0,0.943485975619856,275.607109448082,"KIA2","missense_variant","MT-CO3","protein_coding",191,"G/S",0.75593,"tolerated_low_confidence(0.36)","probably_damaging(0.999)","missense",0.36,0.999,4084,"NA"]
[4875,"C>T","4875C>T",0.0448890578543342,0.0015813,{"v":7.1e-05,"d":"7.10E-05"},27,6,2,0,0.919927418447186,224.797006548176,"KIA2","synonymous_variant","MT-ND2","protein_coding",136,"L",0.76218,"-","-","synonymous","NA","NA",4105,"NA"]
[10283,"A>T","10283A>T",0.0716148553340943,0.0015655,1.121E-4,30,6,4,0,0.964375177479069,250.968194574369,"KIA2","synonymous_variant","MT-ND3","protein_coding",75,"L",0.98286,"-","-","synonymous","NA","NA",4130,"NA"]
[13940,"G>A","13940G>A",0.0219303225364321,0.0015533,{"v":3.41e-05,"d":"3.41E-05"},26,4,0,0,0.917563783334723,260.77174929841,"KIA2","missense_variant","MT-ND5","protein_coding",535,"R/H",0.23164,"deleterious_low_confidence(0.01)","probably_damaging(0.998)","missense",0.01,0.998,4151,"NA"]
[15252,"C>T","15252C>T",0.0308465530847201,1.5485E-3,{"v":4.78e-05,"d":"4.78E-05"},33,7,1,0,0.886813487511218,265.813844714687,"KIA2","missense_variant","MT-CYB","protein_coding",169,"S/L",0.30358,"deleterious_low_confidence(0)","possibly_damaging(0.492)","missense",0,0.492,4164,"NA"]
[2476,"C>A","2476C>A",0.0486814857496722,1.5398E-3,{"v":7.5e-05,"d":"7.50E-05"},28,9,1,0,0.961962344903423,214.455565949486,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.90343,"-","-","non-coding","NA","NA",4182,"NA"]
[12181,"C>T","12181C>T",0.0301765407087406,0.0015281,{"v":4.61e-05,"d":"4.61E-05"},33,4,0,0,0.85059373235085,247.925163704397,"KIA2","non_coding_transcript_exon_variant","MT-TH","Mt_tRNA","-","-",0.17388,"-","-","non-coding","NA","NA",4203,"NA"]
[13786,"C>T","13786C>T",0.025516801615528,0.0015165,{"v":3.87e-05,"d":"3.87E-05"},33,2,0,0,0.886037330710364,269.572497661366,"KIA2","missense_variant","MT-ND5","protein_coding",484,"L/F",0.16157,"tolerated_low_confidence(0.71)","probably_damaging(0.914)","missense",0.71,0.914,4228,"NA"]
[15415,"C>T","15415C>T",0.022458470834563,0.0015039,{"v":3.38e-05,"d":"3.38E-05"},40,2,0,0,0.85401442757206,285.509822263798,"KIA2","synonymous_variant","MT-CYB","protein_coding",223,"Y",0.29392,"-","-","synonymous","NA","NA",4253,"NA"]
[15710,"C>T","15710C>T",0.049252529425048,1.4926E-3,{"v":7.35e-05,"d":"7.35E-05"},23,5,1,1,0.958630978167565,266.367633302152,"KIA2","stop_gained","MT-CYB","protein_coding",322,"Q/*",0.36861,"-","-","truncating","NA","NA",4274,"NA"]
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[11395,"C>T","11395C>T",0.0217294290643832,1.3736E-3,{"v":2.98e-05,"d":"2.98E-05"},32,3,0,0,0.881020061626618,223.377923292797,"KIA2","synonymous_variant","MT-ND4","protein_coding",212,"L",0.99469,"-","-","synonymous","NA","NA",4544,"NA"]
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[7143,"T>C","7143T>C",0.0395698283750141,0.0013038,{"v":5.16e-05,"d":"5.16E-05"},20,6,2,0,0.947367771205007,232.458372310571,"KIA2","missense_variant","MT-CO1","protein_coding",414,"F/L",0.25502,"deleterious_low_confidence(0)","probably_damaging(0.988)","missense",0,0.988,4688,"NA"]
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[12697,"C>T","12697C>T",0.0485716089213689,0.001272,{"v":6.18e-05,"d":"6.18E-05"},20,4,1,0,0.80270265615608,192.678203928906,"KIA2","synonymous_variant","MT-ND5","protein_coding",121,"L",0.77213,"-","-","synonymous","NA","NA",4759,"NA"]
[7743,"C>T","7743C>T",0.0268063958328622,1.271E-3,{"v":3.41e-05,"d":"3.41E-05"},24,3,0,0,0.948509876083979,247.289055191768,"KIA2","missense_variant","MT-CO2","protein_coding",53,"T/I",0.25756,"tolerated_low_confidence(0.08)","probably_damaging(0.999)","missense",0.08,0.999,4764,"NA"]
[15323,"G>A","15323G>A",0.0222941373272097,0.0012639,{"v":2.82e-05,"d":"2.82E-05"},27,3,0,0,0.888691761822296,294.56220767072,"KIA2","missense_variant","MT-CYB","protein_coding",193,"A/T",0.15161,"tolerated_low_confidence(0.77)","benign(0.006)","missense",0.77,0.006,4785,"NA"]
[6258,"G>A","6258G>A",0.0283284418280971,1.2545E-3,{"v":3.55e-05,"d":"3.55E-05"},24,5,0,0,0.916059713829087,240.10196445276,"KIA2","missense_variant","MT-CO1","protein_coding",119,"E/K",0.36125,"deleterious_low_confidence(0.01)","probably_damaging(0.991)","missense",0.01,0.991,4810,"NA"]
[6464,"C>A","6464C>A",0.0170912741480117,1.2446E-3,{"v":2.13e-05,"d":"2.13E-05"},29,0,0,0,0.809008379305262,229.99625818522,"KIA2","synonymous_variant","MT-CO1","protein_coding",187,"S",0.50938,"-","-","synonymous","NA","NA",4835,"NA"]
[8273,"C>T","8273C>T",0.0301472242833743,0.0012386,{"v":3.73e-05,"d":"3.73E-05"},22,3,0,0,0.862777353392148,213.730589335828,"KIA2","intergenic_variant","-","-","-","-",0.02734,"-","-","non-coding","NA","NA",4856,"NA"]
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[5499,"C>G","5499C>G",0.0546728933076887,0.001221,{"v":6.68e-05,"d":"6.68E-05"},9,5,2,0,0.892829664084191,114.158091674462,"KIA2","missense_variant","MT-ND2","protein_coding",344,"L/V",0.17533,"tolerated(0.09)","possibly_damaging(0.879)","missense",0.09,0.879,4902,"NA"]
[2670,"C>T","2670C>T",0.0210842162420044,1.2185E-3,{"v":2.57e-05,"d":"2.57E-05"},25,2,0,0,0.837840519567853,204.214218896165,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.83705,"-","-","non-coding","NA","NA",4907,"NA"]
[6660,"A>G","6660A>G",0.0772115631015325,0.0012081,{"v":9.33e-05,"d":"9.33E-05"},15,5,1,1,0.935120135876625,214.493919550982,"KIA2","missense_variant","MT-CO1","protein_coding",253,"M/V",0.83614,"deleterious_low_confidence(0.01)","benign(0.001)","missense",0.01,1E-3,4932,"NA"]
[16268,"C>T","16268C>T",0.0159457224285879,1.1986E-3,{"v":1.91E-5,"d":"1.91E-05"},23,0,0,0,0.827874037667463,246.631431244153,"KIA2","intergenic_variant","-","-","-","-",0.0545,"-","-","non-coding","NA","NA",4953,"NA"]
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[15967,"G>A","15967G>A",0.0196457740007847,0.001179,{"v":2.32e-05,"d":"2.32E-05"},21,3,0,0,0.952031768318209,234.846585594013,"KIA2","non_coding_transcript_exon_variant","MT-TP","Mt_tRNA","-","-",0.27733,"-","-","non-coding","NA","NA",4999,"NA"]
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[3113,"A>T","3113A>T",0.0265385454730656,1.1646E-3,{"v":3.09e-05,"d":"3.09E-05"},22,2,0,0,0.750692983213961,195.99812909261,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.68209,"-","-","non-coding","NA","NA",5029,"NA"]
[7687,"C>T","7687C>T",0.020784130480398,0.0011567,{"v":2.4e-05,"d":"2.40E-05"},27,2,0,0,0.868553011965055,237.7736202058,"KIA2","synonymous_variant","MT-CO2","protein_coding",34,"I",0.07713,"-","-","synonymous","NA","NA",5050,"NA"]
[4059,"C>T","4059C>T",0.0299549050968337,0.0011467,{"v":3.43E-5,"d":"3.43E-05"},20,4,1,0,0.852739672609527,201.502338634238,"KIA2","synonymous_variant","MT-ND1","protein_coding",251,"S",0.52471,"-","-","synonymous","NA","NA",5075,"NA"]
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[11813,"C>A","11813C>A",0.0180297663915357,1.1293E-3,{"v":2.04e-05,"d":"2.04E-05"},18,1,0,0,0.862350643574595,258.44714686623,"KIA2","missense_variant","MT-ND4","protein_coding",352,"L/I",0.77063,"deleterious_low_confidence(0.01)","benign(0.212)","missense",0.01,0.212,5121,"NA"]
[10800,"T>C","10800T>C",0.0178381636223899,0.0011222,{"v":2e-05,"d":"2.00E-05"},21,1,0,0,0.83612468392868,250.908325537886,"KIA2","missense_variant","MT-ND4","protein_coding",14,"L/P",0.76601,"deleterious_low_confidence(0)","probably_damaging(0.998)","missense",0,0.998,5141,"NA"]
[6539,"C>T","6539C>T",0.0264873793252646,1.1194E-3,{"v":2.96e-05,"d":"2.96E-05"},25,4,0,0,0.816156592868383,235.668849391955,"KIA2","synonymous_variant","MT-CO1","protein_coding",212,"D",0.98042,"-","-","synonymous","NA","NA",5148,"NA"]
[11683,"C>A","11683C>A",0.0363431600479913,0.0011107,{"v":4.04e-05,"d":"4.04E-05"},26,5,0,0,0.971333526698562,301.524789522919,"KIA2","stop_gained","MT-ND4","protein_coding",308,"S/*",0.93856,"-","-","truncating","NA","NA",5173,"NA"]
[1190,"C>T","1190C>T",0.0399641795810147,1.1015E-3,{"v":4.4e-05,"d":"4.40E-05"},21,3,1,0,0.931858462338823,213.161833489242,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.62532,"-","-","non-coding","NA","NA",5198,"NA"]
[11812,"A>T","11812A>T",0.0177328606221611,1.0903E-3,{"v":1.93e-05,"d":"1.93E-05"},25,1,0,0,0.901453637350687,257.393826005613,"KIA2","synonymous_variant","MT-ND4","protein_coding",351,"L",0.77564,"-","-","synonymous","NA","NA",5219,"NA"]
[13487,"C>T","13487C>T",0.0196375729693329,0.0010893,{"v":2.14e-05,"d":"2.14E-05"},26,1,0,0,0.813410627988549,267.075771749298,"KIA2","missense_variant","MT-ND5","protein_coding",384,"P/L",0.76528,"deleterious_low_confidence(0)","probably_damaging(0.999)","missense",0,0.999,5224,"NA"]
[13561,"C>T","13561C>T",0.0348692975194658,1.0815E-3,{"v":3.77e-05,"d":"3.77E-05"},24,1,1,0,0.739240105437359,245.645463049579,"KIA2","synonymous_variant","MT-ND5","protein_coding",409,"L",0.59904,"-","-","synonymous","NA","NA",5245,"NA"]
[12186,"G>A","12186G>A",0.0149278780998966,0.0010732,{"v":1.6e-05,"d":"1.60E-05"},19,1,0,0,0.789748345803631,256.258185219832,"KIA2","non_coding_transcript_exon_variant","MT-TH","Mt_tRNA","-","-",0.18637,"-","-","non-coding","NA","NA",5270,"NA"]
[792,"C>T","792C>T",0.0226042054464896,1.067E-3,{"v":2.41E-5,"d":"2.41E-05"},21,3,0,0,0.833486926826645,251.616463985033,"KIA2","non_coding_transcript_exon_variant","MT-RNR1","Mt_rRNA","-","-",0.24401,"-","-","non-coding","NA","NA",5295,"NA"]
[9516,"T>C","9516T>C",0.0264422330962709,1.0601E-3,{"v":2.8E-5,"d":"2.80E-05"},16,2,0,0,0.738104418425621,265.606173994387,"KIA2","missense_variant","MT-CO3","protein_coding",104,"S/P",0.49798,"deleterious_low_confidence(0)","probably_damaging(0.99)","missense",0,0.99,5316,"NA"]
[12386,"C>T","12386C>T",0.0186369697631079,0.0010526,{"v":1.96e-05,"d":"1.96E-05"},19,1,0,0,0.811464846701384,242.625818521983,"KIA2","missense_variant","MT-ND5","protein_coding",17,"P/L",0.27787,"tolerated_low_confidence(1)","unknown(0)","missense",1,0,5341,"NA"]
[8681,"T>A","8681T>A",0.18498157534301,1.0512E-3,0.0001945,14,10,3,2,0.961605252386935,226.034611786717,"KIA2","missense_variant","MT-ATP6","protein_coding",52,"L/Q",0.01563,"tolerated(0.31)","benign(0.43)","missense",0.31,0.43,5346,"NA"]
[14875,"C>T","14875C>T",0.125124401831627,1.0436E-3,1.306E-4,10,3,2,2,0.9928990616106,252.780168381665,"KIA2","synonymous_variant","MT-CYB","protein_coding",43,"L",0.13314,"-","-","synonymous","NA","NA",5367,"NA"]
[14753,"C>T","14753C>T",0.0216251087863724,1.0374E-3,{"v":2.24e-05,"d":"2.24E-05"},20,1,0,0,0.73001551909495,256.089803554724,"KIA2","missense_variant","MT-CYB","protein_coding",3,"P/S",0.15179,"tolerated_low_confidence(0.32)","benign(0.015)","missense",0.32,0.015,5392,"NA"]
[8367,"T>A","8367T>A",0.0395984242613482,1.0295E-3,{"v":4.08e-05,"d":"4.08E-05"},22,2,1,0,0.910774012952241,228.060804490178,"KIA2","start_lost","MT-ATP8","protein_coding",1,"M/K",0.22267,"deleterious(0)","possibly_damaging(0.861)","truncating",0,0.861,5413,"NA"]
[9031,"C>T","9031C>T",0.0163808659576635,0.001019,{"v":1.67e-05,"d":"1.67E-05"},32,0,0,0,0.883187749878476,310.294667913938,"KIA2","synonymous_variant","MT-ATP6","protein_coding",169,"L",0.14313,"-","-","synonymous","NA","NA",5438,"NA"]
[2058,"C>T","2058C>T",0.0387888968540128,0.0010112,{"v":3.92e-05,"d":"3.92E-05"},14,4,1,0,0.878945018032176,176.696913002806,"KIA2","non_coding_transcript_exon_variant","MT-RNR2","Mt_rRNA","-","-",0.23079,"-","-","non-coding","NA","NA",5463,"NA"]
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