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{"sheet":"Table_S1","index":0,"n_rows":15,"n_cols":5,"rows_kept":15,"merged":[[0,0,0,4]]}
["Supplementary Table 1 – ALEdated Analysis AU test, 24 species"]
[]
["rank","root","name ","obs","au"]
[1,9,"hornwort ",-83.6,0.624]
[2,12,"moss ",83.6,0.475]
[3,8,"monophyletic bryophytes",186.2,0.277]
[4,10,"setaphyte ",613.4,0.001]
[5,4,"between fern gymnosperm",896.7,9e-50]
[6,7,"lycophyte ",908.2,1.0E-4]
[7,11,"liverwort ",1250.5,0.002]
[8,5,"fern ",2697.1,0.055]
[9,2,"angiosperm",3375.4,7e-10]
[10,6,"between lycophyte fern",10539.6,1e-130]
[11,3,"gymnosperm",10836.8,3e-46]
[12,1,"Arabidopsis",57812.8,3e-09]

{"sheet":"Table_S2","index":1,"n_rows":6,"n_cols":11,"rows_kept":6,"merged":[[0,0,0,4]]}
["Supplementary Table 2 – AU and topology tests on the three credible embryophyte roots"]
[]
["Tree","logL","deltaL","bp-RELL","p-KH","p-SH","p-WKH","p-WSH","c-ELW","p-AU","Rejected"]
["monophyletic bryophytes",-2316775.209,0,0.999,0.998,1,0.998,1,0.999,0.998,"no"]
["moss",-2316854.921,79.712,0.0013,0.0016,0.0445,0.0016,0.0032,0.00138,0.00169,"yes"]
["hornworts",-2317063.88,288.67,0,0,0,0,0,1.86E-46,1.13E-78,"yes"]

{"sheet":"Table_S3","index":2,"n_rows":62,"n_cols":8,"rows_kept":62}
["Supplementary Table 3 – DTL (Duplication, Transfer, Loss) and Copy number for each branch on the ancestral reconstruction tree. The analysis was repeated 3 times and the copy number at each node is shown for each analysis"]
[]
["Branch","Duplications","Transfers","Losses","CopyNum1","CopyNum2","CopyNum3","Mean CopyNum"]
[1,2602.14,1438.05,3444.13,10653.1499999999,10652.57,10650.37,{"$f":"AVERAGE(E4:G4)","v":{"v":10652.03,"d":"10652.0"}}]
[2,4704.53,1663.25,3738.72,12993.6299999999,12994.59,12992.73,{"v":12993.65,"d":"12993.7"}]
[3,1421.19,595.87,2907.62,15192.2200000002,15189.99,15191.08,{"v":15191.09667,"d":"15191.1"}]
[4,717.83,288.84,2639.31,14445.4900000003,14442.49,14454.5,{"v":14447.49333,"d":"14447.5"}]
[5,938.24,214.75,1109.78,14983.1700000002,14980.39,14983.41,{"v":14982.32333,"d":"14982.3"}]
[6,1334.6,229.75,1694.03,15723.4200000002,15732.36,15727.72,{"v":15727.83333,"d":"15727.8"}]
[7,671.51,180.91,1840.85,15895.8600000003,15894.75,15903.44,{"v":15898.01667,"d":"15898.0"}]
[8,484.11,67.72,1581.14,15770.0700000003,15767.44,15771.56,{"v":15769.69,"d":"15769.7"}]
[9,3734.12,937.65,3617.5,13243.8600000003,13242.14,13241.97,{"v":13242.65667,"d":"13242.7"}]
[10,4945.26,416.64,1638.6,19296.7500000001,19304.91,19305.08,{"v":19302.24667,"d":"19302.2"}]
[11,1777.84,114.15,811.9,16769.5700000004,16765.98,16766.68,{"v":16767.41,"d":"16767.4"}]
[12,981.66,191.09,983.75,14860.2900000003,14857.44,14850.15,{"v":14855.96,"d":"14856.0"}]
[13,692.98,71.95,528.1,15537.4900000004,15537.91,15540.47,{"v":15538.62333,"d":"15538.6"}]
[14,2402.94,1017.93,3349.74,11758.0400000004,11753.05,11761.02,{"v":11757.37,"d":"11757.4"}]
[15,2986.05,275.57,3382.36,15125.3900000004,15125.08,15126.78,{"v":15125.75,"d":"15125.8"}]
[16,951.97,141.25,1459.79,15287.8900000004,15287.87,15285.26,{"v":15287.00667,"d":"15287.0"}]
[17,4259.49,688.95,1311.85,14605.9200000004,14599.04,14591.92,{"v":14598.96,"d":"14599.0"}]
[18,1694.82,128.67,1017.97,15572.3000000004,15582.13,15574.42,{"v":15576.28333,"d":"15576.3"}]
[19,2863.76,215.72,1113.92,14414.3800000004,14425.58,14420.03,{"v":14419.99667,"d":"14420.0"}]
[20,788.96,101.5,836.05,11958.1800000003,11958.23,11960.44,{"v":11958.95,"d":"11959.0"}]
[21,339.69,100.83,692.72,9722.9900000003,9719.64,9717.88,{"v":9720.17,"d":"9720.2"}]
[22,720.18,97.09,799.46,11315.5100000004,11317.2,11319.12,{"v":11317.27667,"d":"11317.3"}]
[23,342.66,287.99,2244.8,7043.49000000025,7042.4,7044.68,{"v":7043.523333,"d":"7043.5"}]
[24,249.22,53.92,1326.12,9615.30000000037,9618.66,9615.33,{"v":9616.43,"d":"9616.4"}]
[25,1443.71,269.45,609.44,10507.4200000005,10513.73,10508.4,{"v":10509.85,"d":"10509.9"}]
[26,425.24,153.25,265.42,8504.71000000033,8506.06,8502.04,{"v":8504.27,"d":"8504.3"}]
[27,367.45,159.01,296.91,7522.04000000025,7525.58,7522.94,{"v":7523.52,"d":"7523.5"}]
[28,313.93,151.82,191.07,6570.64000000017,6575.95,6578.06,{"v":6574.883333,"d":"6574.9"}]
[29,655.25,491.43,79.62,4710.86000000008,4716.39,4726.78,{"v":4718.01,"d":"4718.0"}]
["Amborella",3743.84,1759.63,4323.35,16500,16500,16500,{"v":16500,"d":"16500.0"}]
["Anthoceros.agrestis",1443.77,211.85,1185.1,13471,13471,13471,{"v":13471,"d":"13471.0"}]
["Anthoceros.punctatus",940.53,152.14,1652,12436,12436,12436,{"v":12436,"d":"12436.0"}]
["Arabidopsis",7256.31,817.08,2542.62,20790,20790,20790,{"v":20790,"d":"20790.0"}]
["Azolla",2257.14,567.44,2002.7,14100,14100,14100,{"v":14100,"d":"14100.0"}]
["Brachypodium",9310.44,1139.65,2600.26,22488,22488,22488,{"v":22488,"d":"22488.0"}]
["Ceratodon",2333.41,593.18,1182.83,16773,16773,16773,{"v":16773,"d":"16773.0"}]
["Ceratophyllum",5723.58,1823.85,6199,17165,17165,17165,{"v":17165,"d":"17165.0"}]
["Chara.braunii",8955.29,1748.39,3464.85,15242,15242,15242,{"v":15242,"d":"15242.0"}]
["Chlorokybus",811.36,2487.3,1867.17,6330,6330,6330,{"v":6330,"d":"6330.0"}]
["Cinnamomum",5401.13,1101.62,2536.3,19725,19725,19725,{"v":19725,"d":"19725.0"}]
["Dioscorea",4206.38,1183,2851.1,17012,17012,17012,{"v":17012,"d":"17012.0"}]
["Fontinalis",1162.59,787.92,3494.41,13330,13330,13330,{"v":13330,"d":"13330.0"}]
["Ginkgo",10312.57,2193.25,3814.58,24687,24687,24687,{"v":24687,"d":"24687.0"}]
["Gnetum",5188.47,1100.1,4892.27,16796,16796,16796,{"v":16796,"d":"16796.0"}]
["Kalanchoe",6384.12,1043.23,2175.68,20470,20470,20470,{"v":20470,"d":"20470.0"}]
["Klebsormidium",2543.77,2829.16,1989.24,10366,10366,10366,{"v":10366,"d":"10366.0"}]
["Magnolia",7320.71,1216.9,3438.28,20961,20961,20961,{"v":20961,"d":"20961.0"}]
["Marchantia",266.46,168.84,664.42,10427,10427,10427,{"v":10427,"d":"10427.0"}]
["Marchantia.ruderalis",372.95,66.09,995.04,10105,10105,10105,{"v":10105,"d":"10105.0"}]
["Mesotaenium",965.2,1576.15,1556.7,8109,8109,8109,{"v":8109,"d":"8109.0"}]
["Nymphaea",4382.83,1376.42,4696.96,16660,16660,16660,{"v":16660,"d":"16660.0"}]
["Physcomitrium",4701.29,1279.51,2228.73,18418,18418,18418,{"v":18418,"d":"18418.0"}]
["Pinus.lambertiana",12059.08,737.26,4052.86,28077,28077,28077,{"v":28077,"d":"28077.0"}]
["Pseudotsuga.menziesii",16066.7,1441.27,3178.68,33754,33754,33754,{"v":33754,"d":"33754.0"}]
["Salvinia",1811.24,656.64,2105.37,13631,13631,13631,{"v":13631,"d":"13631.0"}]
["Selaginella.lepidophylla",4428.16,838.91,1813.41,15364,15364,15364,{"v":15364,"d":"15364.0"}]
["Selaginella.moellendorfii",3960.45,772.86,1861.18,14818,14818,14818,{"v":14818,"d":"14818.0"}]
["Spirogloea",4819.76,1118.65,2050.05,11126,11126,11126,{"v":11126,"d":"11126.0"}]
["Syntrichia",1508.49,270.49,2897.03,13866,13866,13866,{"v":13866,"d":"13866.0"}]

{"sheet":"Table_S4","index":3,"n_rows":431375,"n_cols":4,"rows_kept":4500,"cut":true,"merged":[[0,0,0,4]],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Supplementary Table 4 –  Gene families present at each node. Genes are labelled according to their gene family and Arabidopsis annotation"]
[]
["Node","Gene family code","Copies","Arabidopsis gene present"]
[10,9399,0.99,"AT1G05060"]
[10,10702,1.01,"AT5G59140"]
[10,327,2.12,"AT3G20630"]
[10,11923,17.24,"AT3G09410"]
[10,11923,17.24,"AT3G09405"]
[10,11923,17.24,"AT4G19420"]
[10,11923,17.24,"AT5G45280"]
[10,11923,17.24,"AT4G19410"]
[10,11923,17.24,"AT3G62060"]
[10,11923,17.24,"AT1G57590"]
[10,11923,17.24,"AT5G26670"]
[10,11923,17.24,"AT2G46930"]
[10,11923,17.24,"AT5G23870"]
[10,11923,17.24,"AT1G09550"]
[10,2089,1,"AT2G38025"]
[10,19485,1.09,"AT4G03965"]
[10,19485,1.09,"AT4G22250"]
[10,19485,1.09,"AT3G25030"]
[10,19485,1.09,"AT4G13100"]
[10,19485,1.09,"AT1G62370"]
[10,19485,1.09,"AT3G07120"]
[10,17173,1.23,"AT5G13450"]
[10,13424,1,"AT3G26115"]
[10,7277,8.85,"AT3G12955"]
[10,7277,8.85,"AT1G17345"]
[10,7277,8.85,"AT1G72430"]
[10,7277,8.85,"AT5G20820"]
[10,19614,4.02,"AT2G15730"]
[10,19614,4.02,"AT3G50620"]
[10,5068,1.01]
[10,7271,1,"AT2G24820"]
[10,16542,1]
[10,5419,4.9,"AT3G19000"]
[10,5419,4.9,"AT3G19010"]
[10,7342,1,"AT2G21950"]
[10,6058,2.9,"AT1G03050"]
[10,6058,2.9,"AT4G02650"]
[10,6058,2.9,"AT4G32285"]
[10,6058,2.9,"AT2G25430"]
[10,6058,2.9,"AT1G05020"]
[10,6058,2.9,"AT1G33340"]
[10,18780,1.53,"AT5G55490"]
[10,5267,1,"AT5G39840"]
[10,19586,4.11,"AT5G50130"]
[10,19586,4.11,"AT1G64590"]
[10,19586,4.11,"AT4G24050"]
[10,9208,1.02,"AT3G19740"]
[10,9208,1.02,"AT1G50140"]
[10,12440,1.03,"AT2G24090"]
[10,18570,2.03]
[10,20211,1.76,"AT2G38570"]
[10,4880,2.13,"AT1G78020"]
[10,4880,2.13,"AT1G22160"]
[10,4880,2.13,"AT5G65040"]
[10,4880,2.13,"AT4G39795"]
[10,2533,1,"AT3G25920"]
[10,16953,1,"AT2G26000"]
[10,16953,1,"AT2G42160"]
[10,12350,2.01,"AT5G66590"]
[10,9432,1.43,"AT2G27900"]
[10,12913,2.31,"AT2G38560"]
[10,12913,2.31,"AT2G42725"]
[10,12913,2.31,"AT4G18720"]
[10,9546,1,"AT1G16970"]
[10,205,1.05,"AT5G03370"]
[10,1342,1.03,"AT2G15695"]
[10,1342,1.03,"AT5G44250"]
[10,8188,1.01]
[10,313,1.11,"AT5G51810"]
[10,313,1.11,"AT5G07200"]
[10,313,1.11,"AT1G60980"]
[10,313,1.11,"AT4G25420"]
[10,313,1.11,"AT1G44090"]
[10,16496,1,"AT1G73885"]
[10,6095,1.43,"AT4G21070"]
[10,6095,1.43,"AT1G04020"]
[10,18147,6.06,"AT2G01275"]
[10,18147,6.06,"AT5G38070"]
[10,18147,6.06,"AT2G02960"]
[10,18147,6.06,"AT1G14260"]
[10,18147,6.06,"AT1G02610"]
[10,18147,6.06,"AT4G02075"]
[10,18147,6.06,"AT3G47550"]
[10,18147,6.06,"AT5G62460"]
[10,3935,17]
[10,8827,1,"AT4G29860"]
[10,2886,1.35,"AT5G35360"]
[10,657,3.11,"AT5G13560"]
[10,657,3.11,"AT2G37370"]
[10,17070,1]
[10,20632,3.02,"AT4G37550"]
[10,16825,1.01,"AT3G17470"]
[10,5796,5.64,"AT2G27550"]
[10,5796,5.64,"AT5G03840"]
[10,5796,5.64,"AT5G62040"]
[10,1022,1,"AT2G22010"]
[10,14400,1,"AT1G61620"]
[10,18795,1]
[10,13410,2.15,"AT5G37830"]
[10,19878,2.5,"AT5G66750"]
[10,17290,1,"AT5G49880"]
[10,2567,0.99,"AT4G37020"]
[10,3127,1,"AT2G05620"]
[10,15667,0.99,"AT2G16930"]
[10,3469,1,"AT3G46450"]
[10,12007,5.35]
[10,11998,1.23,"AT5G17170"]
[10,4875,4.15,"AT3G27060"]
[10,4875,4.15,"AT3G23580"]
[10,8661,17.54]
[10,9274,1]
[10,2487,1,"AT1G48950"]
[10,11332,0.99,"AT3G15420"]
[10,11332,0.99,"AT1G80745"]
[10,5700,1.25]
[10,12172,1,"AT1G24793"]
[10,1688,1,"AT5G23535"]
[10,10330,0.99,"AT3G61800"]
[10,9842,1.29]
[10,14741,7.12,"AT1G77700"]
[10,14741,7.12,"AT1G75030"]
[10,14741,7.12,"AT1G75040"]
[10,14741,7.12,"AT1G75050"]
[10,14741,7.12,"AT1G19320"]
[10,14741,7.12,"AT2G24810"]
[10,3400,1]
[10,3065,8.15,"AT2G42040"]
[10,9385,5.35,"AT3G56580"]
[10,9385,5.35,"AT1G60360"]
[10,9385,5.35,"AT2G40830"]
[10,9385,5.35,"AT1G68180"]
[10,9385,5.35,"AT3G10815"]
[10,3567,1,"AT3G61360"]
[10,9285,0.99,"AT3G48120"]
[10,14716,2.02,"AT2G17020"]
[10,14716,2.02,"AT1G55590"]
[10,8020,1]
[10,4277,1.64,"AT3G12800"]
[10,4277,1.64,"AT1G36580"]
[10,960,6.84,"AT5G39890"]
[10,960,6.84,"AT5G15120"]
[10,960,6.84,"AT1G18490"]
[10,960,6.84,"AT3G58670"]
[10,960,6.84,"AT2G42670"]
[10,16386,1.01,"AT1G52930"]
[10,8719,1.16,"AT2G20320"]
[10,8512,4.55,"AT1G09240"]
[10,8512,4.55,"AT1G56430"]
[10,8512,4.55,"AT5G04950"]
[10,8512,4.55,"AT4G26483"]
[10,17404,1,"AT1G32080"]
[10,575,2.08,"AT3G44590"]
[10,575,2.08,"AT2G27710"]
[10,575,2.08,"AT3G28500"]
[10,575,2.08,"AT5G40040"]
[10,7725,2,"AT3G19770"]
[10,7725,2,"AT5G09320"]
[10,3929,1]
[10,3992,1.12]
[10,16014,7.87,"AT3G19430"]
[10,13833,1,"AT5G64180"]
[10,5595,2.02,"AT1G54115"]
[10,5595,2.02,"AT3G14070"]
[10,5595,2.02,"AT5G17860"]
[10,5595,2.02,"AT5G17850"]
[10,19957,3.02,"AT4G13270"]
[10,19957,3.02,"AT1G52330"]
[10,5197,1,"AT2G20360"]
[10,15029,2.25,"AT1G80300"]
[10,11624,0.94,"AT2G26270"]
[10,11624,0.94,"AT3G43930"]
[10,3236,1.73]
[10,14318,1,"AT4G37130"]
[10,13120,1.05,"AT3G56510"]
[10,4339,2,"AT1G21350"]
[10,11778,1.2,"AT1G25350"]
[10,14838,1,"AT3G48170"]
[10,14838,1,"AT1G74920"]
[10,3975,1.04,"AT4G18640"]
[10,3975,1.04,"AT5G45840"]
[10,3975,1.04,"AT5G58530"]
[10,3975,1.04,"AT5G07150"]
[10,3975,1.04,"AT2G40270"]
[10,3975,1.04,"AT3G56050"]
[10,3975,1.04,"AT5G58540"]
[10,14298,1,"AT5G17290"]
[10,8949,10.21]
[10,19478,5.06,"AT1G26480"]
[10,19478,5.06,"AT1G78220"]
[10,19478,5.06,"AT1G22290"]
[10,19478,5.06,"AT1G22300"]
[10,19478,5.06,"AT1G34760"]
[10,19478,5.06,"AT2G42590"]
[10,3448,1,"AT1G79020"]
[10,3448,1,"AT1G16690"]
[10,20185,4,"AT4G10380"]
[10,20185,4,"AT1G80760"]
[10,18204,1,"AT2G17340"]
[10,18204,1,"AT2G17320"]
[10,18867,1,"AT1G50910"]
[10,2242,1,"AT3G60210"]
[10,2242,1,"AT2G44650"]
[10,8707,1.06]
[10,6350,1.99,"AT1G29800"]
[10,20043,1.77,"AT3G12040"]
[10,19868,1.02]
[10,5824,4.41,"AT5G05830"]
[10,5824,4.41,"AT2G37950"]
[10,5824,4.41,"AT2G34200"]
[10,5824,4.41,"AT5G01070"]
[10,5824,4.41,"AT5G59000"]
[10,17646,1.68,"AT1G52620"]
[10,3337,1,"AT5G51640"]
[10,3337,1,"AT4G25360"]
[10,12349,0.99,"AT1G10310"]
[10,8204,1,"AT1G79120"]
[10,8800,0.92]
[10,14081,2.04,"AT5G56180"]
[10,1992,1.01,"AT2G20570"]
[10,1992,1.01,"AT5G44190"]
[10,12250,2.18,"AT1G75330"]
[10,12699,1.03,"AT1G76630"]
[10,14290,2.06,"AT3G17365"]
[10,14290,2.06,"AT3G60910"]
[10,8209,0.53]
[10,18733,1,"AT3G21610"]
[10,18733,1,"AT1G67600"]
[10,18733,1,"AT1G24350"]
[10,5318,1,"AT5G52840"]
[10,5318,1,"AT4G28005"]
[10,11813,1.83]
[10,11803,1]
[10,5536,2.05,"AT1G64850"]
[10,5536,2.05,"AT2G26140"]
[10,19211,1,"AT4G33470"]
[10,237,0.79,"AT2G17972"]
[10,9413,1,"AT5G11340"]
[10,9663,1,"AT1G50420"]
[10,18,1]
[10,6312,1]
[10,19385,3,"AT3G27750"]
[10,19385,3,"AT5G09315"]
[10,7372,2,"AT3G57650"]
[10,7372,2,"AT1G51260"]
[10,3872,1.66,"AT1G76070"]
[10,3872,1.66,"AT1G20310"]
[10,17461,1,"AT3G16730"]
[10,7518,1.12,"AT1G50250"]
[10,8871,1,"AT3G10400"]
[10,20134,1.11,"AT2G45695"]
[10,3313,8.14]
[10,4620,2.39,"AT2G25340"]
[10,4620,2.39,"AT5G11150"]
[10,4620,2.39,"AT5G22360"]
[10,19167,1,"AT2G40570"]
[10,20026,0.93,"AT5G02120"]
[10,5473,1.05]
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[9,18161,2.09,"AT4G10440"]
[9,18161,2.09,"AT2G45750"]
[9,18161,2.09,"AT4G00750"]
[9,18161,2.09,"AT2G43200"]
[9,9294,2,"AT2G46210"]
[9,9294,2,"AT3G61580"]
[9,7268,1.03,"AT3G09860"]
[9,6359,1.01,"AT3G07270"]
[9,18865,0.93,"AT1G44770"]
[9,5187,3.17,"AT1G48930"]
[9,5187,3.17,"AT2G44570"]
[9,5187,3.17,"AT1G64390"]
[9,5187,3.17,"AT2G44540"]
[9,5187,3.17,"AT4G11050"]
[9,20605,1.11,"AT2G39730"]
[9,4961,2.11]
[9,8542,1,"AT1G60995"]
[9,5532,1,"AT4G38890"]
[9,8570,1.01,"AT5G51170"]
[9,19823,1,"AT4G34140"]
[9,3774,1.15,"AT4G36210"]
[9,3774,1.15,"AT2G18100"]
[9,19271,1.01]
[9,5521,1,"AT3G17910"]
[9,5521,1,"AT1G48510"]
[9,19342,2.98,"AT3G13320"]
[9,19342,2.98,"AT1G55720"]
[9,13530,4.05,"AT3G05030"]
[9,13530,4.05,"AT5G55470"]
[9,13530,4.05,"AT3G06370"]
[9,11307,1]
[9,13057,1,"AT4G25500"]
[9,13057,1,"AT3G61860"]
[9,13057,1,"AT2G46610"]
[9,13057,1,"AT5G52040"]
[9,5715,1,"AT4G35850"]
[9,15986,2.97]
[9,6499,1.28]
[9,18901,1,"AT3G22530"]
[9,18901,1,"AT4G14830"]
[9,1161,1.81,"AT2G21130"]
[9,1161,1.81,"AT2G16600"]
[9,1161,1.81,"AT4G34870"]
[9,1161,1.81,"AT3G56070"]
[9,1161,1.81,"AT3G22920"]
[9,16585,2.03,"AT3G10410"]
[9,16585,2.03,"AT3G45010"]
[9,16585,2.03,"AT5G22980"]
[9,16585,2.03,"AT5G22960"]
[9,13300,1.25,"AT5G64870"]
[9,2229,5.49,"AT1G15360"]
[9,2229,5.49,"AT5G11190"]
[9,2229,5.49,"AT5G25390"]
[9,2229,5.49,"AT5G25190"]
[9,2259,2.03,"AT2G05710"]
[9,2259,2.03,"AT4G26970"]
[9,2259,2.03,"AT5G54950"]
[9,17552,1,"AT5G48240"]
[9,19755,1,"AT1G21650"]
[9,17832,3.88,"AT1G03110"]
[9,18085,1.01,"AT1G05120"]
[9,18085,1.01,"AT1G02670"]
[9,18554,2,"AT5G39410"]
[9,13358,2,"AT4G24290"]
[9,13358,2,"AT1G28380"]
[9,16469,1.01,"AT5G23440"]
[9,16469,1.01,"AT5G08410"]
[9,14892,1,"AT3G03070"]
[9,18162,1,"AT5G53490"]
[9,2640,1.87,"AT5G48655"]
[9,2640,1.87,"AT3G07200"]
[9,4467,1,"AT5G26040"]
[9,3392,3.79,"AT2G17890"]
[9,3392,3.79,"AT4G36070"]
[9,3392,3.79,"AT5G66210"]
[9,7006,1,"AT5G16750"]
[9,10750,1.03,"AT5G62575"]
[9,10750,1.03,"AT3G47833"]
[9,46,1,"AT5G38890"]
[9,7254,1.28,"AT4G15180"]
[9,3625,3.43,"AT2G05630"]
[9,3625,3.43,"AT3G15580"]
[9,3625,3.43,"AT3G06420"]
[9,3625,3.43,"AT4G04620"]
[9,3625,3.43,"AT4G16520"]
[9,3625,3.43,"AT1G62040"]
[9,3625,3.43,"AT2G45170"]
[9,3625,3.43,"AT3G60640"]
[9,11010,3.04,"AT3G18570"]
[9,11010,3.04,"AT2G25890"]
[9,11010,3.04,"AT5G40420"]
[9,11010,3.04,"AT3G27660"]
[9,11010,3.04,"AT3G01570"]
[9,11010,3.04,"AT5G51210"]
[9,11010,3.04,"AT4G25140"]
[9,11010,3.04,"AT1G48990"]
[9,11010,3.04,"AT5G07550"]
[9,11010,3.04,"AT5G07560"]
[9,11010,3.04,"AT5G07571"]
[9,269,1]
[9,6259,1,"AT5G43680"]
[9,15384,2,"AT5G50970"]
[9,15384,2,"AT5G19920"]
[9,5161,1.01]
[9,5185,2.79,"AT2G35260"]
[9,5185,2.79,"AT4G17840"]
[9,16063,1]
[9,5860,5.03,"AT4G31450"]
[9,5860,5.03,"AT5G24870"]
[9,5860,5.03,"AT5G10650"]
[9,5860,5.03,"AT1G36950"]
[9,5860,5.03,"AT4G00070"]
[9,5229,2.02,"AT5G09740"]
[9,15108,2,"AT3G16170"]
[9,1767,1.58,"AT4G27690"]
[9,15164,1,"AT5G63040"]
[9,15164,1,"AT1G48460"]
[9,13579,1.01]
[9,16292,1]
[9,20525,1.24,"AT3G18680"]
[9,19424,3,"AT5G11860"]
[9,19424,3,"AT4G18140"]
[9,19424,3,"AT5G46410"]
[9,9127,1.01,"AT3G15660"]
[9,18139,0.93,"AT5G47490"]
[9,18139,0.93,"AT5G47480"]
[9,138,1,"AT1G22940"]
[9,6278,5.76]
[9,10497,1.01]
[9,7712,1,"AT2G38020"]
[9,16330,1.63]
[9,17071,1.04]
[9,6013,1,"AT1G25500"]
[9,5133,4.23]
[9,15175,0.97]
[9,530,1.01,"AT5G20930"]
[9,11634,3]
[9,9746,1,"AT1G63160"]
[9,4862,2.11,"AT3G59420"]
[9,14952,2.97,"AT4G35300"]
[9,14952,2.97,"AT1G20840"]
[9,14952,2.97,"AT3G51490"]
[9,14952,2.97,"AT1G42970"]
[9,14062,1,"AT2G22530"]
[9,14806,0.98]
[9,15582,1.01,"AT5G64380"]
[9,13991,1]
[9,20781,2.81,"AT5G12010"]
[9,20781,2.81,"AT5G45600"]
[9,20781,2.81,"AT4G29780"]
[9,20781,2.81,"AT2G18000"]
[9,20450,0.86,"AT3G46560"]
[9,9610,1.53]
[9,19203,2,"AT5G08630"]
[9,19203,2,"AT2G21820"]
[9,15639,1,"AT4G31790"]
[9,1825,1]
[9,15988,2.16,"AT4G07990"]
[9,20190,2.88,"AT4G37750"]
[9,20190,2.88,"AT1G72570"]
[9,13469,1.97,"AT1G05410"]
[9,17021,1,"AT3G48780"]
[9,17021,1,"AT3G48790"]
[9,5373,1.55,"AT1G47510"]
[9,19746,2,"AT1G17760"]
[9,17653,1.98,"AT3G19184"]
[9,17653,1.98,"AT5G42700"]
[9,17653,1.98,"AT5G58280"]
[9,3751,1,"AT1G31870"]
[9,17435,1,"AT5G58250"]
[9,16077,1.01,"AT5G49820"]
[9,11496,1.96,"AT1G71250"]
[9,11496,1.96,"AT1G71691"]
[9,11496,1.96,"AT5G15720"]
[9,11496,1.96,"AT5G08460"]
[9,11496,1.96,"AT2G03980"]
[9,11496,1.96,"AT2G04020"]
[9,17088,1,"AT5G19930"]
[9,19716,0.82]
[9,2011,1,"AT4G11380"]
[9,13904,1,"AT3G20440"]
[9,18362,1,"AT4G14210"]
[9,9428,1,"AT4G19860"]
[9,9428,1,"AT3G03310"]
[9,19991,1.82,"AT4G01610"]
[9,19991,1.82,"AT1G02305"]
[9,19991,1.82,"AT1G02300"]
[9,20042,2.05,"AT2G47350"]
[9,20042,2.05,"AT3G06660"]
[9,20042,2.05,"AT1G56460"]
[9,13893,2.33,"AT3G50350"]
[9,13893,2.33,"AT4G33985"]
[9,13893,2.33,"AT1G08790"]
[9,13893,2.33,"AT5G28690"]
[9,13893,2.33,"AT2G15590"]
[9,13893,2.33,"AT2G15610"]
[9,11581,1.28,"AT3G03770"]
[9,11581,1.28,"AT1G14390"]
[9,11581,1.28,"AT5G14210"]
[9,11581,1.28,"AT5G63410"]
[9,11581,1.28,"AT2G02780"]
[9,19035,0.99]
[9,20280,1,"AT2G17695"]
[9,6887,1.14,"AT1G06130"]
[9,6887,1.14,"AT2G43430"]
[9,6887,1.14,"AT2G31350"]
[9,9922,1.62,"AT5G56890"]
[9,9922,1.62,"AT2G20300"]
[9,6652,2.19,"AT2G21660"]
[9,6652,2.19,"AT4G39260"]
[9,6652,2.19,"AT2G14160"]
[9,6652,2.19,"AT2G21690"]
[9,6166,1,"AT5G63000"]
[9,12932,1.01,"AT4G14030"]
[9,12932,1.01,"AT3G23800"]
[9,590,1.24,"AT1G77405"]
[9,19174,1]
[9,9140,1.01]
[9,16199,2,"AT4G09650"]
[9,20419,1]
[9,19890,1,"AT5G52560"]
[9,5407,4.77,"AT4G03400"]
[9,5407,4.77,"AT2G46370"]
[9,997,1.3,"AT1G78610"]
[9,997,1.3,"AT3G14810"]
[9,997,1.3,"AT1G53470"]
[9,997,1.3,"AT2G17010"]
[9,997,1.3,"AT1G49260"]
[9,997,1.3,"AT2G17000"]
[9,10869,1,"AT4G13360"]
[9,10869,1,"AT3G24360"]
[9,9326,1,"AT1G30510"]
[9,9326,1,"AT4G05390"]
[9,15451,2.13]
[9,17280,1,"AT2G06010"]
[9,12249,1,"AT2G02148"]
[9,1856,1,"AT5G65860"]
[9,1856,1,"AT5G67350"]
[9,15374,0.99,"AT5G17070"]
[9,9091,1.22,"AT5G20570"]
[9,14604,1,"AT1G32990"]
[9,14604,1,"AT5G51610"]
[9,16248,6.14,"AT2G33360"]
[9,16248,6.14,"AT4G11450"]
[9,16248,6.14,"AT1G63520"]
[9,16248,6.14,"AT1G04490"]
[9,6665,1.43,"AT2G26080"]
[9,13533,1,"AT4G38240"]
[9,3404,1.02,"AT2G20310"]
[9,3404,1.02,"AT5G54150"]
[9,3404,1.02,"AT4G28690"]
[9,3404,1.02,"AT4G27660"]
[9,3404,1.02,"AT5G54148"]
[9,7767,1.01]
[9,443,1,"AT1G49590"]
[9,19848,1,"AT3G27120"]
[9,12502,3.5,"AT1G80920"]
[9,6855,1.06,"AT4G27270"]
[9,6855,1.06,"AT5G58800"]
[9,8794,3.67,"AT2G34980"]
[9,8794,3.67,"AT5G08080"]
[9,8794,3.67,"AT3G03800"]
[9,10940,2.31]
[9,4785,1.64,"AT5G45390"]
[9,19913,1]
[9,6029,4.39]
[9,3158,2.08]
[9,14970,1.99]
[9,3377,1,"AT3G54826"]
[9,14157,1,"AT4G05420"]
[9,4814,1.2,"AT5G64830"]
[9,7034,2,"AT3G55440"]
[9,13501,0.92]
[9,16391,4.95]
[9,17491,5.72]
[9,426,1,"AT4G02260"]
[9,20620,1,"AT2G42310"]
[9,10681,2.01,"AT5G02040"]
[9,10681,2.01,"AT5G05987"]
[9,10681,2.01,"AT3G11397"]
[9,16721,1,"AT2G37860"]
[9,16721,1,"AT5G22790"]
[9,4933,1,"AT1G22700"]
[9,17107,1]
[9,8311,1,"AT4G37480"]
[9,3790,1.03,"AT1G30455"]
[9,3790,1.03,"AT2G45100"]
[9,3790,1.03,"AT3G09360"]
[9,3790,1.03,"AT2G01280"]
[9,3790,1.03,"AT5G37480"]
[9,17500,1.12,"AT3G44190"]
[9,17500,1.12,"AT5G22140"]
[9,11675,1,"AT1G13560"]
[9,8751,1,"AT3G51800"]
[9,7877,1,"AT5G65000"]
[9,224,2.02]
[9,3597,1,"AT5G51070"]
[9,1554,1.66,"AT1G66470"]
[9,1554,1.66,"AT5G37800"]
[9,19096,1.01,"AT4G31150"]
[9,19074,2,"AT4G32160"]
[9,19074,2,"AT2G25350"]
[9,15196,1]
[9,8708,1.02,"AT2G46900"]
[9,9903,1,"AT1G12820"]
[9,9903,1,"AT3G62980"]
[9,9903,1,"AT4G03190"]
[9,10716,1.07,"AT4G10320"]
[9,10716,1.07,"AT3G23145"]
[9,12028,1,"AT1G68830"]
[9,9618,1,"AT1G67060"]
[9,3382,1.1,"AT4G11860"]
[9,3382,1.1,"AT4G22960"]
[9,4351,0.99,"AT4G33670"]
[9,10854,3.06,"AT2G21600"]
[9,10854,3.06,"AT2G18240"]
[9,10854,3.06,"AT2G23310"]
[9,9801,1,"AT1G23360"]
[9,3045,1.01,"AT4G13400"]
[9,19067,2,"AT3G06730"]
[9,12980,1.19,"AT1G01470"]
[9,12980,1.19,"AT2G46140"]
[9,11079,1,"AT3G32930"]
[9,1437,1.7]
[9,13295,1,"AT2G16390"]
[9,13295,1,"AT2G21450"]
[9,13295,1,"AT3G32280"]
[9,13295,1,"AT2G21455"]
[9,13295,1,"AT3G31900"]
[9,13295,1,"AT3G32330"]
[9,15751,1.15,"AT4G00430"]
[9,6465,1.88]
[9,18361,0.99,"AT1G27060"]
[9,9664,3.04,"AT3G29770"]
[9,9664,3.04,"AT1G26360"]
[9,9664,3.04,"AT1G69240"]
[9,9664,3.04,"AT4G09900"]
[9,15958,0.53]
[9,9183,3,"AT2G41250"]
[9,11574,1.99,"AT3G29360"]
[9,11574,1.99,"AT1G26570"]
[9,11574,1.99,"AT3G01010"]
[9,4270,1]
[9,3486,1,"AT5G38880"]

{"sheet":"Table_S5","index":4,"n_rows":8085,"n_cols":2,"rows_kept":8085,"merged":[[0,0,0,4]]}
["Supplementary Table 5 – Frequency of GO terms at ancestral embryophyte node"]
[]
["GO_term ","Frequency"]
["'de novo' AMP biosynthetic process",1]
["'de novo' GDP-L-fucose biosynthetic process",1]
["'de novo' IMP biosynthetic process",1]
["'de novo' L-methionine biosynthetic process",1]
["'de novo' NAD biosynthetic process",1]
["'de novo' NAD biosynthetic process from aspartate",1]
["'de novo' posttranslational protein folding",4]
["'de novo' protein folding",13]
["'de novo' pyrimidine nucleobase biosynthetic process",1]
["(+)-abscisic acid 8'-hydroxylase activity",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transport",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity",1]
["(1->3)-beta-D-glucan catabolic process",1]
["(1->3)-beta-D-glucan metabolic process",1]
["(R)-2-hydroxyglutarate dehydrogenase activity",1]
["(S)-2-hydroxy-acid oxidase activity",1]
["[2Fe-2S] cluster assembly",1]
["[myelin basic protein]-arginine N-methyltransferase activity",2]
["[pyruvate kinase]-phosphatase activity",1]
["1-2-alpha-L-fucosidase activity",1]
["1-4-alpha-glucan branching enzyme activity",1]
["1-4-alpha-oligoglucan phosphorylase activity",2]
["1-4-beta-D-xylan synthase activity",1]
["1-4-dihydroxy-2-naphthoate octaprenyltransferase activity",1]
["1-acylglycerophosphocholine O-acyltransferase activity",2]
["1-deoxy-D-xylulose-5-phosphate reductoisomerase activity",1]
["1-deoxy-D-xylulose-5-phosphate synthase activity",1]
["1-phosphatidylinositol 4-kinase activity",2]
["1-pyrroline-5-carboxylate dehydrogenase activity",1]
["2 iron- 2 sulfur cluster binding",1]
["2-3-bisphosphoglycerate-independent phosphoglycerate mutase activity",1]
["2-acylglycerol O-acyltransferase activity",1]
["2-alkenal reductase (NADP+) activity",1]
["2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity",1]
["2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity",1]
["2-carboxy-D-arabinitol-1-phosphatase activity",1]
["2-hydroxyglutarate dehydrogenase activity",1]
["2-oxoglutarate metabolic process",2]
["2-oxoglutarate-dependent dioxygenase activity",3]
["2'-deoxyribonucleotide metabolic process",1]
["23S rRNA (adenine(1618)-N(6))-methyltransferase activity",1]
["3-4-dihydroxy-2-butanone-4-phosphate synthase activity",1]
["3-8-divinyl protochlorophyllide a 8-vinyl reductase activity",1]
["3-chloroallyl aldehyde dehydrogenase activity",1]
["3-hydroxyacyl-CoA dehydratase activity",2]
["3-hydroxyacyl-CoA dehydrogenase activity",3]
["3-hydroxybutyrate dehydrogenase activity",1]
["3-hydroxybutyryl-CoA epimerase activity",2]
["3-isopropylmalate dehydratase activity",1]
["3-isopropylmalate dehydrogenase activity",1]
["3-keto-sphinganine metabolic process",1]
["3-mercaptopyruvate sulfurtransferase activity",1]
["3-methyl-2-oxobutanoate hydroxymethyltransferase activity",1]
["3-methylbut-2-enoyl-CoA(4-) metabolic process",1]
["3-oxoacyl-[acyl-carrier-protein] synthase activity",2]
["3-phosphoshikimate 1-carboxyvinyltransferase activity",1]
["3'-5' DNA helicase activity",7]
["3'-5' exonuclease activity",13]
["3'-5' RNA helicase activity",2]
["3'-5'-exodeoxyribonuclease activity",2]
["3'-5'-exoribonuclease activity",9]
["3'-flap endonuclease activity",1]
["3'-phospho-5'-adenylyl sulfate transmembrane transport",1]
["3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity",1]
["3'-phosphoadenosine 5'-phosphosulfate transport",1]
["3'-tRNA processing endoribonuclease activity",1]
["3'-tyrosyl-DNA phosphodiesterase activity",1]
["3'-UTR-mediated mRNA stabilization",1]
["3'(2')-5'-bisphosphate nucleotidase activity",2]
["4 iron- 4 sulfur cluster binding",2]
["4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity",1]
["4-4-dimethyl-9beta-19-cyclopropylsterol oxidation",1]
["4-6-pyruvylated galactose residue biosynthetic process",1]
["4-alpha-glucanotransferase activity",1]
["4-alpha-methyl-delta7-sterol oxidation",1]
["4-aminobutyrate transaminase activity",1]
["4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity",1]
["4-hydroxyproline metabolic process",1]
["5-amino-6-(5-phosphoribosylamino)uracil reductase activity",1]
["5-formyltetrahydrofolate transmembrane transporter activity",1]
["5-formyltetrahydrofolate transport",1]
["5-methyltetrahydrofolate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity",1]
["5-phosphoribose 1-diphosphate biosynthetic process",1]
["5-phosphoribose 1-diphosphate metabolic process",1]
["5'-3' DNA helicase activity",6]
["5'-3' exodeoxyribonuclease activity",2]
["5'-3' exonuclease activity",6]
["5'-3' RNA helicase activity",4]
["5'-3' RNA polymerase activity",3]
["5'-flap endonuclease activity",2]
["6-phosphofructokinase activity",2]
["7-8-dihydroneopterin 3'-triphosphate biosynthetic process",1]
["7-methylguanosine mRNA capping",1]
["7-methylguanosine RNA capping",1]
["7S RNA binding",1]
["8-oxo-dGDP phosphatase activity",1]
["9-15-9'-tri-cis-zeta-carotene isomerase activity",1]
["9-9'-di-cis-zeta-carotene desaturation to 7-9-7'-9'-tetra-cis-lycopene",1]
["9-9'-dicis-carotene:quinone oxidoreductase activity",1]
["9-cis-epoxycarotenoid dioxygenase activity",2]
["9+0 non-motile cilium",1]
["9+2 non-motile cilium",1]
["90S preribosome",9]
["A2A adenosine receptor binding",1]
["ABC-type peptide transporter activity",2]
["ABC-type protein transporter activity",2]
["abscisic acid binding",2]
["abscisic acid biosynthetic process",1]
["abscisic acid metabolic process",1]
["abscisic acid transmembrane transporter activity",1]
["abscisic acid transport",1]
["abscisic acid-activated signaling pathway",10]
["abscission",2]
["acceptance of pollen",2]
["acetate metabolic process",2]
["acetate-CoA ligase activity",2]
["acetolactate synthase activity",2]
["acetolactate synthase complex",1]
["acetyl-CoA biosynthetic process",2]
["acetyl-CoA biosynthetic process from pyruvate",1]
["acetyl-CoA carboxylase activity",1]
["acetyl-CoA metabolic process",3]
["acetyl-CoA:L-glutamate N-acetyltransferase activity",1]
["acetylation-dependent protein binding",2]
["acetylglucosaminyltransferase activity",3]
["acetylglutamate kinase regulator activity",1]
["acetylpyruvate hydrolase activity",1]
["acetyltransferase activity",13]
["acetyltransferase complex",4]
["ACF complex",1]
["acid phosphatase activity",5]
["acid secretion",1]
["acid-amino acid ligase activity",3]
["acid-thiol ligase activity",6]
["acidic amino acid transmembrane transporter activity",1]
["acidic amino acid transport",1]
["acrosomal membrane",1]
["acrosomal vesicle",1]
["actin binding",6]
["actin cortical patch",1]
["actin cortical patch localization",1]
["actin cytoskeleton",8]
["actin cytoskeleton organization",10]
["actin filament",1]
["actin filament binding",3]
["actin filament bundle assembly",1]
["actin filament bundle organization",1]
["actin filament capping",1]
["actin filament organization",9]
["actin filament polymerization",1]
["actin filament-based movement",1]
["actin filament-based process",14]
["actin filament-based transport",1]
["actin fusion focus",1]
["actin nucleation",4]
["actin polymerization or depolymerization",2]
["Actinobacterium-type cell wall biogenesis",1]
["action potential",1]
["activation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["activation of GTPase activity",7]
["activation of immune response",14]
["activation of innate immune response",12]
["activation of MAPK activity",2]
["activation of MAPKK activity",2]
["activation of phospholipase C activity",1]
["activation of phospholipase D activity",1]
["activation of protein kinase activity",8]
["active ion transmembrane transporter activity",5]
["active transmembrane transporter activity",52]
["acyl carnitine transmembrane transport",1]
["acyl carnitine transmembrane transporter activity",1]
["acyl carnitine transport",1]
["acyl-[acyl-carrier-protein] hydrolase activity",1]
["acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity",1]
["acyl-CoA biosynthetic process",3]
["acyl-CoA dehydrogenase activity",5]
["acyl-CoA metabolic process",7]
["acyl-CoA oxidase activity",3]
["acylglycerol biosynthetic process",4]
["acylglycerol catabolic process",3]
["acylglycerol homeostasis",1]
["acylglycerol lipase activity",2]
["acylglycerol metabolic process",7]
["acylglycerol O-acyltransferase activity",1]
["acyltransferase activity",37]
["acyltransferase activity- transferring groups other than amino-acyl groups",31]
["acyltransferase- acyl groups converted into alkyl on transfer",3]
["adaxial/abaxial axis specification",1]
["adaxial/abaxial pattern specification",2]
["adenine biosynthetic process",1]
["adenine metabolic process",1]
["adenine nucleotide transmembrane transporter activity",8]
["adenine nucleotide transport",9]
["adenine phosphoribosyltransferase activity",1]
["adenine salvage",1]
["adenosine 3'-5'-bisphosphate transmembrane transport",1]
["adenosine 3'-5'-bisphosphate transmembrane transporter activity",1]
["adenosine receptor binding",1]
["adenosylmethionine-8-amino-7-oxononanoate transaminase activity",1]
["adenyl nucleotide binding",42]
["adenyl ribonucleotide binding",42]
["adenylate cyclase binding",1]
["adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway",1]
["adenylate cyclase-modulating G protein-coupled receptor signaling pathway",3]
["adenylate kinase activity",3]
["adenylosuccinate synthase activity",1]
["adenylyl-sulfate reductase activity",1]
["adenylylsulfate kinase activity",2]
["adenylyltransferase activity",9]
["adhesion of symbiont to host",1]
["adhesion of symbiont to host cell",1]
["adhesion of symbiont to host epithelial cell",1]
["ADP binding",2]
["ADP metabolic process",10]
["ADP transmembrane transporter activity",6]
["ADP transport",7]
["ADP-ribose pyrophosphohydrolase activity",1]
["ADP-sugar diphosphatase activity",1]
["adult behavior",1]
["adult locomotory behavior",1]
["aerobic electron transport chain",1]
["aerobic respiration",10]
["aggregation involved in sorocarp development",2]
["aggregation of unicellular organisms",2]
["aggresome assembly",1]
["aging",18]
["agmatinase activity",1]
["agmatine deiminase activity",1]
["alanine catabolic process",1]
["alanine metabolic process",2]
["alanine-glyoxylate transaminase activity",2]
["alanine-oxo-acid transaminase activity",2]
["alanine-tRNA ligase activity",1]
["alanyl-tRNA aminoacylation",1]
["alcohol binding",5]
["alcohol biosynthetic process",14]
["alcohol catabolic process",6]
["alcohol metabolic process",23]
["alcohol transmembrane transporter activity",3]
["aldehyde biosynthetic process",4]
["aldehyde catabolic process",3]
["aldehyde dehydrogenase (NAD+) activity",3]
["aldehyde dehydrogenase (NADP+) activity",1]
["aldehyde-lyase activity",3]
["alditol biosynthetic process",1]
["alditol catabolic process",2]
["alditol metabolic process",4]
["alditol phosphate metabolic process",2]
["aldo-keto reductase (NADP) activity",1]
["aldonate transmembrane transport",1]
["aldonate transmembrane transporter activity",1]
["alkali metal ion binding",1]
["alkaloid metabolic process",1]
["alkane 1-monooxygenase activity",1]
["alkane biosynthetic process",2]
["alkene binding",2]
["alkene biosynthetic process",1]
["alkylthioltransferase activity",1]
["allantoate deiminase activity",1]
["allantoin catabolic process",4]
["allantoin metabolic process",4]
["allantoinase activity",1]
["alpha DNA polymerase:primase complex",1]
["alpha-(1->3)-fucosyltransferase activity",1]
["alpha-1-2-mannosyltransferase activity",2]
["alpha-1-3-glucosidase activity",1]
["alpha-1-3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-1-6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-alpha-trehalase activity",2]
["alpha-alpha-trehalose-phosphate synthase (UDP-forming) activity",1]
["alpha-amino acid biosynthetic process",32]
["alpha-amino acid catabolic process",14]
["alpha-amino acid metabolic process",54]
["alpha-amylase activity",1]
["alpha-galactosidase activity",1]
["alpha-glucosidase activity",1]
["alpha-ketoglutarate transmembrane transporter activity",1]
["alpha-ketoglutarate transport",2]
["alpha-L-arabinofuranosidase activity",1]
["alpha-L-fucosidase activity",1]
["alpha-mannosidase activity",5]
["alpha-tubulin binding",2]
["alternative oxidase activity",1]
["alveolar lamellar body",1]
["ameboidal-type cell migration",1]
["amide binding",17]
["amide biosynthetic process",77]
["amide transmembrane transporter activity",9]
["amide transport",102]
["amidine-lyase activity",1]
["amidophosphoribosyltransferase activity",1]
["amine biosynthetic process",7]
["amine catabolic process",3]
["amine metabolic process",14]
["amino acid activation",17]
["amino acid binding",3]
["amino acid homeostasis",1]
["amino acid kinase activity",2]
["amino acid salvage",1]
["amino acid transmembrane transport",13]
["amino acid transmembrane transporter activity",13]
["amino acid transport",13]
["amino sugar biosynthetic process",2]
["amino sugar catabolic process",1]
["amino sugar metabolic process",5]
["amino-acid racemase activity",1]
["aminoacyl-tRNA hydrolase activity",1]
["aminoacyl-tRNA ligase activity",16]
["aminoacyl-tRNA synthetase multienzyme complex",3]
["aminoacyltransferase activity",3]
["aminoglycan catabolic process",2]
["aminoglycan metabolic process",2]
["aminopeptidase activity",6]
["ammeline aminohydrolase activity",1]
["ammonia assimilation cycle",2]
["ammonia-lyase activity",2]
["ammonium homeostasis",1]
["ammonium ion binding",2]
["ammonium ion metabolic process",12]
["ammonium transmembrane transport",4]
["ammonium transmembrane transporter activity",4]
["ammonium transport",5]
["AMP binding",1]
["AMP biosynthetic process",1]
["AMP metabolic process",1]
["AMP transmembrane transporter activity",1]
["AMP transport",1]
["amylase activity",1]
["amylopectin binding",2]
["amylopectin biosynthetic process",4]
["amylopectin metabolic process",4]
["amyloplast",9]
["amyloplast organization",1]
["anaerobic respiration",1]
["anaphase-promoting complex",3]
["anaphase-promoting complex-dependent catabolic process",1]
["anastral spindle assembly",1]
["anastral spindle assembly involved in male meiosis",1]
["anatomical structure arrangement",10]
["anatomical structure development",428]
["anatomical structure formation involved in morphogenesis",51]
["anatomical structure homeostasis",15]
["anatomical structure maturation",23]
["anatomical structure morphogenesis",168]
["anchored component of membrane",8]
["anchored component of plasma membrane",6]
["anchored component of synaptic vesicle membrane",1]
["androecium development",14]
["androgen receptor binding",1]
["animal organ development",24]
["animal organ formation",1]
["animal organ morphogenesis",6]
["anion binding",104]
["anion channel activity",4]
["anion homeostasis",7]
["anion transmembrane transport",62]
["anion transmembrane transporter activity",56]
["anion transport",70]
["anion:anion antiporter activity",3]
["anisotropic cell growth",1]
["annealing activity",1]
["annealing helicase activity",1]
["annulate lamellae",1]
["anterior/posterior pattern specification",1]
["anterograde axonal transport",2]
["anterograde trans-synaptic signaling",2]
["anther dehiscence",4]
["anther development",8]
["anther wall tapetum development",1]
["anthocyanin accumulation in tissues in response to UV light",1]
["anthocyanin-containing compound biosynthetic process",3]
["anthocyanin-containing compound metabolic process",6]
["antibiotic biosynthetic process",3]
["antibiotic catabolic process",6]
["antibiotic metabolic process",17]
["antifungal innate immune response",1]
["antigen processing and presentation",5]
["antigen processing and presentation of exogenous antigen",4]
["antigen processing and presentation of exogenous peptide antigen",4]
["antigen processing and presentation of exogenous peptide antigen via MHC class II",4]
["antigen processing and presentation of peptide antigen",5]
["antigen processing and presentation of peptide antigen via MHC class II",5]
["antigen processing and presentation of peptide or polysaccharide antigen via MHC class II",5]
["antigen receptor-mediated signaling pathway",2]
["antioxidant activity",11]
["antiporter activity",23]
["antisense RNA metabolic process",2]
["AP-1 adaptor complex",1]
["AP-2 adaptor complex",1]
["AP-4 adaptor complex",3]
["AP-type membrane coat adaptor complex",5]
["apical part of cell",1]
["apical plasma membrane",1]
["apical protein localization",1]
["apocarotenoid biosynthetic process",1]
["apocarotenoid metabolic process",1]
["apolipoprotein B mRNA editing enzyme complex",1]
["apoplast",43]
["apoptotic cell clearance",2]
["apoptotic mitochondrial changes",1]
["apoptotic process",6]
["apoptotic process involved in development",1]
["apoptotic signaling pathway",1]
["appendage development",4]
["appendage morphogenesis",4]
["arabinogalactan protein metabolic process",4]
["arabinose biosynthetic process",1]
["arabinose metabolic process",1]
["arachidonate transport",1]
["arachidonic acid metabolic process",2]
["arachidonic acid secretion",1]
["arbuscular mycorrhizal association",2]
["arginase activity",1]
["arginine biosynthetic process",4]
["arginine biosynthetic process via ornithine",1]
["arginine catabolic process",1]
["arginine decarboxylase activity",1]
["arginine metabolic process",5]
["arginine N-methyltransferase activity",6]
["arginine transmembrane transport",1]
["arginine transmembrane transporter activity",1]
["arginine transport",1]
["arginine-tRNA ligase activity",1]
["argininosuccinate lyase activity",1]
["argininosuccinate metabolic process",1]
["argininosuccinate synthase activity",1]
["arginyl-tRNA aminoacylation",1]
["aromatic amino acid family biosynthetic process",6]
["aromatic amino acid family biosynthetic process- prephenate pathway",3]
["aromatic amino acid family catabolic process",4]
["aromatic amino acid family metabolic process",11]
["aromatic amino acid transmembrane transporter activity",1]
["aromatic amino acid transport",1]
["aromatic compound biosynthetic process",149]
["aromatic compound catabolic process",65]
["Arp2/3 protein complex",2]
["arsenate ion transmembrane transport",3]
["arsenate ion transmembrane transporter activity",3]
["arsenite secondary active transmembrane transporter activity",2]
["arsenite transmembrane transporter activity",2]
["arsenite transport",2]
["ascospore formation",1]
["ascospore-type prospore",1]
["ascospore-type prospore assembly",1]
["ascospore-type prospore-specific spindle pole body remodeling",1]
["asexual reproduction",1]
["asexual sporulation",1]
["asparagine-tRNA ligase activity",1]
["asparaginyl-tRNA aminoacylation",1]
["aspartate carbamoyltransferase activity",1]
["aspartate family amino acid biosynthetic process",5]
["aspartate family amino acid metabolic process",9]
["aspartate kinase activity",2]
["aspartate metabolic process",3]
["aspartate-prephenate aminotransferase activity",1]
["aspartate-tRNA ligase activity",1]
["aspartic endopeptidase activity- intramembrane cleaving",1]
["aspartic-type endopeptidase activity",3]
["aspartic-type peptidase activity",3]
["aspartyl-tRNA aminoacylation",1]
["assembly of large subunit precursor of preribosome",1]
["aster",1]
["astral microtubule organization",1]
["asymmetric cell division",7]
["asymmetric neuroblast division",1]
["asymmetric stem cell division",1]
["ATF6-mediated unfolded protein response",1]
["Atg1/ULK1 kinase complex",1]
["Atg12 activating enzyme activity",1]
["Atg12-Atg5-Atg16 complex",1]
["Atg8 activating enzyme activity",1]
["Atg8 ligase activity",1]
["ATP binding",39]
["ATP biosynthetic process",11]
["ATP citrate synthase activity",1]
["ATP generation from ADP",10]
["ATP generation from poly-ADP-D-ribose",1]
["ATP metabolic process",18]
["ATP phosphoribosyltransferase activity",1]
["ATP synthesis coupled electron transport",3]
["ATP synthesis coupled proton transport",1]
["ATP transmembrane transporter activity",7]
["ATP transport",7]
["ATP-dependent chromatin remodeling",6]
["ATP-dependent microtubule motor activity",5]
["ATP-dependent microtubule motor activity- minus-end-directed",1]
["ATP-dependent microtubule motor activity- plus-end-directed",4]
["ATP-dependent NAD(P)H-hydrate dehydratase activity",1]
["ATP-dependent peptidase activity",10]
["ATP-independent citrate lyase complex",1]
["ATP:ADP antiporter activity",2]
["ATPase",199]
["ATPase activator activity",2]
["ATPase activity- coupled to transmembrane movement of ions- rotational mechanism",3]
["ATPase binding",2]
["ATPase complex",12]
["ATPase dependent transmembrane transport complex",1]
["ATPase regulator activity",2]
["ATPase- acting on DNA",17]
["ATPase- acting on RNA",32]
["ATPase-coupled arsenite transmembrane transporter activity",2]
["ATPase-coupled cation transmembrane transporter activity",5]
["ATPase-coupled inorganic anion transmembrane transporter activity",3]
["ATPase-coupled intramembrane lipid transporter activity",1]
["ATPase-coupled ion transmembrane transporter activity",5]
["ATPase-coupled lipid transmembrane transporter activity",1]
["ATPase-coupled phosphate ion transmembrane transporter activity",1]
["ATPase-coupled transmembrane transporter activity",77]
["attachment of GPI anchor to protein",2]
["attachment of mitotic spindle microtubules to kinetochore",8]
["attachment of spindle microtubules to kinetochore",11]
["attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation",2]
["autolysis",1]
["autonomic nervous system development",1]
["autophagosome",4]
["autophagosome assembly",13]
["autophagosome maturation",1]
["autophagosome membrane",1]
["autophagosome organization",13]
["autophagy",21]
["autophagy of mitochondrion",7]
["autophagy of nucleus",7]
["autophagy of peroxisome",1]
["auxin binding",2]
["auxin biosynthetic process",2]
["auxin efflux",3]
["auxin efflux transmembrane transporter activity",3]
["auxin homeostasis",8]
["auxin influx",1]
["auxin influx transmembrane transporter activity",1]
["auxin metabolic process",4]
["auxin polar transport",9]
["auxin transmembrane transporter activity",4]
["auxin transport",14]
["auxin-activated signaling pathway",4]
["axillary shoot meristem initiation",1]
["axis specification",4]
["axo-dendritic transport",2]
["axon",3]
["axon development",1]
["axon ensheathment",1]
["axon guidance",1]
["axon terminus",1]
["axonal transport",2]
["axonal transport of mitochondrion",2]
["axonemal basal plate",1]
["axonemal dynein complex assembly",4]
["axonemal microtubule depolymerization",1]
["axonemal outer doublet",1]
["axoneme",6]
["axoneme assembly",5]
["axonogenesis",1]
["azole transmembrane transport",1]
["azole transmembrane transporter activity",1]
["azurophil granule",1]
["azurophil granule membrane",1]
["barbed-end actin filament capping",1]
["basal RNA polymerase II transcription machinery binding",4]
["basal transcription machinery binding",4]
["base conversion or substitution editing",1]
["base-excision repair",3]
["base-excision repair- AP site formation",1]
["base-excision repair- gap-filling",1]
["basic amino acid transmembrane transport",1]
["basic amino acid transmembrane transporter activity",1]
["basic amino acid transport",1]
["basophil activation",1]
["basophil activation involved in immune response",1]
["BAT3 complex binding",1]
["behavior",6]
["benzene-containing compound metabolic process",2]
["beta-1-3-galactosyltransferase activity",1]
["beta-1-4-mannosyltransferase activity",2]
["beta-alanine catabolic process",1]
["beta-alanine metabolic process",1]
["beta-catenin binding",1]
["beta-catenin-TCF complex assembly",1]
["beta-D-fucosidase activity",1]
["beta-galactosidase activity",3]
["beta-gentiobiose beta-glucosidase activity",1]
["beta-glucan biosynthetic process",5]
["beta-glucan catabolic process",1]
["beta-glucan metabolic process",7]
["beta-glucosidase activity",5]
["beta-glucuronidase activity",1]
["beta-lactamase activity",1]
["beta-mannosidase activity",1]
["beta-N-acetylglucosaminidase activity",1]
["beta-N-acetylhexosaminidase activity",1]
["beta-tubulin binding",4]
["betaine-aldehyde dehydrogenase activity",1]
["bile acid metabolic process",1]
["binding",669]
["bioactive lipid receptor activity",1]
["biofilm matrix",1]
["biological adhesion",5]
["biological process involved in interaction with host",9]
["biological process involved in interaction with symbiont",2]
["biological process involved in interspecies interaction between organisms",23]
["biological process involved in intraspecies interaction between organisms",8]
["biological process involved in symbiotic interaction",22]
["biological regulation",679]
["biological_process",1836]
["biomineral tissue development",1]
["biosynthetic process",486]
["biotin binding",1]
["biotin biosynthetic process",3]
["biotin carboxyl carrier protein biosynthetic process",1]
["biotin metabolic process",3]
["biotin synthase activity",1]
["biotin-[acetyl-CoA-carboxylase] ligase activity",1]
["biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity",1]
["biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity",1]
["biotin-protein ligase activity",1]
["blastocyst development",4]
["blastocyst formation",1]
["blastocyst growth",1]
["blood coagulation",3]
["blood vessel development",2]
["blood vessel morphogenesis",1]
["blue light photoreceptor activity",1]
["blue light signaling pathway",5]
["body morphogenesis",1]
["bone development",1]
["bone marrow development",1]
["bone mineralization",1]
["bone remodeling",1]
["bone resorption",1]
["border follicle cell migration",1]
["bounding membrane of organelle",175]
["box C/D RNP complex",2]
["box H/ACA RNA 3'-end processing",1]
["box H/ACA RNA metabolic process",1]
["box H/ACA RNA processing",1]
["box H/ACA RNP complex",2]
["box H/ACA snoRNA binding",1]
["box H/ACA snoRNP assembly",1]
["box H/ACA snoRNP complex",2]
["brain development",6]
["brain morphogenesis",1]
["branched-chain amino acid biosynthetic process",6]
["branched-chain amino acid catabolic process",4]
["branched-chain amino acid metabolic process",10]
["brassinosteroid biosynthetic process",3]
["brassinosteroid homeostasis",2]
["brassinosteroid mediated signaling pathway",6]
["brassinosteroid metabolic process",3]
["Bub1-Bub3 complex localization to kinetochore",1]
["bubble DNA binding",1]
["bundle sheath cell fate specification",1]
["butyrate metabolic process",1]
["butyrate-CoA ligase activity",1]
["C-22 sterol desaturase activity",1]
["C-4 methylsterol oxidase activity",2]
["C-5 methylation of cytosine",1]
["C-5 sterol desaturase activity",1]
["C-8 sterol isomerase activity",1]
["C-acyltransferase activity",1]
["C-methyltransferase activity",3]
["C-palmitoyltransferase activity",1]
["C-terminal protein amino acid modification",2]
["C-terminal protein lipidation",2]
["C4-dicarboxylate transmembrane transporter activity",4]
["C4-dicarboxylate transport",4]
["cadherin binding",1]
["cadmium ion binding",1]
["cadmium ion transmembrane transport",1]
["cadmium ion transmembrane transporter activity",1]
["cadmium ion transport",2]
["CAF-1 complex",1]
["caffeoyl-CoA O-methyltransferase activity",1]
["caffeoyl-CoA: alcohol caffeoyl transferase activity",1]
["calcium channel activity",6]
["calcium ion binding",11]
["calcium ion export",1]
["calcium ion export across plasma membrane",1]
["calcium ion homeostasis",6]
["calcium ion import",2]
["calcium ion import across plasma membrane",1]
["calcium ion import into cytosol",1]
["calcium ion transmembrane import into cytosol",1]
["calcium ion transmembrane transport",10]
["calcium ion transmembrane transporter activity",10]
["calcium ion transport",11]
["calcium ion transport into cytosol",1]
["calcium-dependent ATPase activity",1]
["calcium-dependent cysteine-type endopeptidase activity",1]
["calcium-dependent phospholipid binding",1]
["calcium-dependent protein kinase activity",2]
["calcium-dependent protein serine/threonine kinase activity",2]
["calcium-independent phospholipase A2 activity",1]
["calcium-ion regulated exocytosis",1]
["calcium-mediated signaling",3]
["calcium:cation antiporter activity",4]
["calcium:proton antiporter activity",1]
["calcium:sodium antiporter activity",3]
["callose deposition in cell wall",6]
["callose localization",7]
["callus formation",1]
["calmodulin binding",10]
["calmodulin-dependent protein kinase activity",3]
["camera-type eye development",1]
["cAMP-mediated signaling",1]
["canonical glycolysis",1]
["canonical Wnt signaling pathway",2]
["carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity",1]
["carbamoyl-phosphate synthase complex",1]
["carbohydrate binding",10]
["carbohydrate biosynthetic process",46]
["carbohydrate catabolic process",39]
["carbohydrate derivative binding",65]
["carbohydrate derivative biosynthetic process",92]
["carbohydrate derivative catabolic process",10]
["carbohydrate derivative metabolic process",144]
["carbohydrate derivative transmembrane transporter activity",18]
["carbohydrate derivative transport",22]
["carbohydrate export",1]
["carbohydrate homeostasis",1]
["carbohydrate kinase activity",6]
["carbohydrate mediated signaling",13]
["carbohydrate metabolic process",101]
["carbohydrate phosphatase activity",6]
["carbohydrate phosphorylation",6]
["carbohydrate transmembrane transport",9]
["carbohydrate transmembrane transporter activity",9]
["carbohydrate transport",10]
["carbohydrate:cation symporter activity",5]
["carbohydrate:proton symporter activity",5]
["carbon fixation",4]
["carbon-carbon lyase activity",16]
["carbon-nitrogen ligase activity- with glutamine as amido-N-donor",2]
["carbon-nitrogen lyase activity",3]
["carbon-oxygen lyase activity",15]
["carbon-sulfur lyase activity",5]
["carboxy-lyase activity",8]
["carboxy-terminal domain protein kinase complex",4]
["carboxyl- or carbamoyltransferase activity",1]
["carboxylic acid binding",9]
["carboxylic acid biosynthetic process",83]
["carboxylic acid catabolic process",32]
["carboxylic acid metabolic process",170]
["carboxylic acid transmembrane transport",28]
["carboxylic acid transmembrane transporter activity",28]
["carboxylic acid transport",31]
["carboxylic ester hydrolase activity",14]
["carboxypeptidase activity",5]
["cardiac cell development",1]
["cardiac chamber development",1]
["cardiac chamber morphogenesis",1]
["cardiac conduction",1]
["cardiac muscle cell development",1]
["cardiac muscle cell differentiation",2]
["cardiac muscle tissue development",2]
["cardiac septum development",1]
["cardiac septum morphogenesis",1]
["cardiocyte differentiation",2]
["cardiolipin acyl-chain remodeling",1]
["cardiolipin metabolic process",1]
["carotene beta-ring hydroxylase activity",1]
["carotene biosynthetic process",2]
["carotene catabolic process",2]
["carotene metabolic process",4]
["carotenoid biosynthetic process",10]
["carotenoid catabolic process",1]
["carotenoid dioxygenase activity",2]
["carotenoid metabolic process",15]
["carpel development",13]
["cartilage development",1]
["Casparian strip",1]
["catabolic process",246]
["catabolism by organism of cell wall peptidoglycan in other organism",1]
["catalytic activity",1013]
["catalytic activity- acting on a glycoprotein",4]
["catalytic activity- acting on a protein",244]
["catalytic activity- acting on a rRNA",8]
["catalytic activity- acting on a tRNA",22]
["catalytic activity- acting on DNA",42]
["catalytic activity- acting on RNA",88]
["catalytic complex",171]
["catalytic step 1 spliceosome",3]
["catalytic step 2 spliceosome",13]
["cation binding",94]
["cation channel activity",10]
["cation homeostasis",29]
["cation transmembrane transport",54]
["cation transmembrane transporter activity",48]
["cation transport",57]
["cation-transporting ATPase complex",1]
["cation:cation antiporter activity",6]
["CCAAT-binding factor complex",1]
["CCR4-NOT complex",2]
["CCR4-NOT core complex",2]
["Cdc73/Paf1 complex",1]
["CDP-alcohol phosphatidyltransferase activity",1]
["CDP-choline pathway",1]
["CDP-diacylglycerol biosynthetic process",1]
["CDP-diacylglycerol metabolic process",1]
["cell activation",5]
["cell activation involved in immune response",4]
["cell adhesion",4]
["cell adhesion molecule binding",1]
["cell aggregation",2]
["cell aging",1]
["cell body",4]
["cell chemotaxis",1]
["cell communication",198]
["cell communication by electrical coupling",1]
["cell communication by electrical coupling involved in cardiac conduction",1]
["cell communication involved in cardiac conduction",1]
["cell cortex",11]
["cell cortex of cell tip",1]
["cell cortex region",1]
["cell cycle",94]
["cell cycle checkpoint signaling",17]
["cell cycle DNA replication",8]
["cell cycle DNA replication initiation",1]
["cell cycle G1/S phase transition",4]
["cell cycle G2/M phase transition",3]
["cell cycle phase transition",10]
["cell cycle process",90]
["cell cycle switching",1]
["cell cycle switching- mitotic to meiotic cell cycle",1]
["cell death",26]
["cell death in response to oxidative stress",3]
["cell development",57]
["cell differentiation",96]
["cell differentiation in spinal cord",1]
["cell division",34]
["cell division site",5]
["cell envelope",1]
["cell fate commitment",8]
["cell fate commitment involved in formation of primary germ layer",1]
["cell fate specification",5]
["cell growth",55]
["cell junction",128]
["cell junction organization",3]
["cell leading edge",1]
["cell maturation",18]
["cell migration",6]
["cell morphogenesis",55]
["cell morphogenesis involved in differentiation",29]
["cell morphogenesis involved in neuron differentiation",2]
["cell motility",10]
["cell part morphogenesis",3]
["cell periphery",330]
["cell plate",9]
["cell plate assembly",1]
["cell plate formation involved in plant-type cell wall biogenesis",1]
["cell pole",1]
["cell population proliferation",14]
["cell projection",28]
["cell projection assembly",11]
["cell projection membrane",2]
["cell projection morphogenesis",2]
["cell projection organization",16]
["cell recognition",3]
["cell redox homeostasis",5]
["cell septum",1]
["cell surface",6]
["cell surface pattern recognition receptor signaling pathway",1]
["cell surface receptor signaling pathway",25]
["cell surface receptor signaling pathway involved in cell-cell signaling",3]
["cell tip",6]
["cell tip growth",14]
["cell trailing edge",1]
["cell trailing edge membrane",1]
["cell volume homeostasis",1]
["cell wall",65]
["cell wall assembly",1]
["cell wall biogenesis",22]
["cell wall disassembly",1]
["cell wall disruption in other organism",1]
["cell wall hydroxyproline-rich glycoprotein metabolic process",4]
["cell wall macromolecule biosynthetic process",9]
["cell wall macromolecule catabolic process",2]
["cell wall macromolecule metabolic process",19]
["cell wall modification",9]
["cell wall modification involved in multidimensional cell growth",1]
["cell wall organization",21]
["cell wall organization involved in conjugation with cellular fusion",1]
["cell wall organization or biogenesis",47]
["cell wall pectin biosynthetic process",4]
["cell wall pectin metabolic process",6]
["cell wall polysaccharide biosynthetic process",9]
["cell wall polysaccharide catabolic process",1]
["cell wall polysaccharide metabolic process",14]
["cell wall proteoglycan metabolic process",4]
["cell wall thickening",6]
["cell-cell adhesion",1]
["cell-cell contact zone",1]
["cell-cell junction",125]
["cell-cell junction organization",3]
["cell-cell recognition",1]
["cell-cell signaling",7]
["cell-cell signaling by wnt",3]
["cellobiose glucosidase activity",3]
["cellular alcohol catabolic process",1]
["cellular alcohol metabolic process",1]
["cellular aldehyde metabolic process",20]
["cellular alkane metabolic process",2]
["cellular alkene metabolic process",1]
["cellular amide catabolic process",4]
["cellular amide metabolic process",96]
["cellular amine metabolic process",11]
["cellular amino acid biosynthetic process",37]
["cellular amino acid catabolic process",16]
["cellular amino acid metabolic process",78]
["cellular ammonium homeostasis",1]
["cellular aromatic compound metabolic process",497]
["cellular biogenic amine biosynthetic process",7]
["cellular biogenic amine catabolic process",3]
["cellular biogenic amine metabolic process",11]
["cellular biosynthetic process",448]
["cellular bud",1]
["cellular bud neck",1]
["cellular bud tip",1]
["cellular calcium ion homeostasis",4]
["cellular carbohydrate biosynthetic process",32]
["cellular carbohydrate catabolic process",21]
["cellular carbohydrate metabolic process",72]
["cellular catabolic process",224]
["cellular cation homeostasis",16]
["cellular chemical homeostasis",18]
["cellular component assembly",171]
["cellular component assembly involved in morphogenesis",13]
["cellular component biogenesis",251]
["cellular component disassembly",25]
["cellular component macromolecule biosynthetic process",9]
["cellular component maintenance",1]
["cellular component morphogenesis",68]
["cellular component organization",482]
["cellular component organization or biogenesis",540]
["cellular copper ion homeostasis",1]
["cellular defense response",1]
["cellular detoxification",13]
["cellular developmental process",133]
["cellular divalent inorganic cation homeostasis",5]
["cellular glucan metabolic process",34]
["cellular homeostasis",26]
["cellular hormone metabolic process",4]
["cellular hypotonic response",1]
["cellular ion homeostasis",16]
["cellular iron ion homeostasis",3]
["cellular ketone metabolic process",10]
["cellular lipid catabolic process",27]
["cellular lipid metabolic process",135]
["cellular localization",159]
["cellular macromolecule biosynthetic process",203]
["cellular macromolecule catabolic process",105]
["cellular macromolecule localization",116]
["cellular macromolecule metabolic process",602]
["cellular metabolic compound salvage",19]
["cellular metabolic process",1154]
["cellular metal ion homeostasis",10]
["cellular modified amino acid biosynthetic process",6]
["cellular modified amino acid catabolic process",2]
["cellular modified amino acid metabolic process",16]
["cellular monovalent inorganic cation homeostasis",7]
["cellular nitrogen compound biosynthetic process",211]
["cellular nitrogen compound catabolic process",66]
["cellular nitrogen compound metabolic process",536]
["cellular oxidant detoxification",12]
["cellular polysaccharide biosynthetic process",26]
["cellular polysaccharide catabolic process",15]
["cellular polysaccharide metabolic process",45]
["cellular potassium ion homeostasis",1]
["cellular process",1484]
["cellular process involved in reproduction in multicellular organism",20]
["cellular protein catabolic process",72]
["cellular protein complex disassembly",9]
["cellular protein localization",106]
["cellular protein metabolic process",392]
["cellular protein modification process",287]
["cellular protein-containing complex assembly",94]
["cellular protein-containing complex localization",5]
["cellular respiration",18]
["cellular response to abiotic stimulus",37]
["cellular response to abscisic acid stimulus",13]
["cellular response to acetate",1]
["cellular response to acid chemical",37]
["cellular response to alcohol",13]
["cellular response to amino acid starvation",3]
["cellular response to amino acid stimulus",3]
["cellular response to anoxia",1]
["cellular response to antibiotic",13]
["cellular response to auxin stimulus",5]
["cellular response to biotic stimulus",4]
["cellular response to blue light",6]
["cellular response to brassinosteroid stimulus",6]
["cellular response to calcium ion",3]
["cellular response to cAMP",1]
["cellular response to carbohydrate stimulus",15]
["cellular response to chemical stimulus",125]
["cellular response to chitin",1]
["cellular response to cold",6]
["cellular response to copper ion",1]
["cellular response to copper ion starvation",1]
["cellular response to cytokine stimulus",2]
["cellular response to cytokinin stimulus",4]
["cellular response to decreased oxygen levels",5]
["cellular response to disaccharide stimulus",2]
["cellular response to DNA damage stimulus",95]
["cellular response to drug",20]
["cellular response to dsRNA",8]
["cellular response to endogenous stimulus",57]
["cellular response to environmental stimulus",37]
["cellular response to ethylene stimulus",14]
["cellular response to external biotic stimulus",1]
["cellular response to external stimulus",54]
["cellular response to extracellular stimulus",51]
["cellular response to gamma radiation",1]
["cellular response to gibberellin stimulus",3]
["cellular response to glucose starvation",3]
["cellular response to growth factor stimulus",2]
["cellular response to heat",2]
["cellular response to high light intensity",1]
["cellular response to hormone stimulus",50]
["cellular response to hydrogen peroxide",1]
["cellular response to hypoxia",4]
["cellular response to indolebutyric acid stimulus",1]
["cellular response to inorganic substance",16]
["cellular response to insulin stimulus",2]
["cellular response to interferon-gamma",2]
["cellular response to ionizing radiation",3]
["cellular response to iron ion",7]
["cellular response to jasmonic acid stimulus",11]
["cellular response to leucine",1]
["cellular response to leucine starvation",1]
["cellular response to light intensity",2]
["cellular response to light stimulus",23]
["cellular response to lipid",19]
["cellular response to lipopolysaccharide",1]
["cellular response to magnesium ion",1]
["cellular response to manganese ion",1]
["cellular response to mechanical stimulus",2]
["cellular response to metal ion",14]
["cellular response to misfolded protein",3]
["cellular response to molecule of bacterial origin",2]
["cellular response to nerve growth factor stimulus",1]
["cellular response to nitrate",2]
["cellular response to nitric oxide",1]
["cellular response to nitrogen compound",20]
["cellular response to nitrogen levels",10]
["cellular response to nitrogen starvation",7]
["cellular response to nutrient",4]
["cellular response to nutrient levels",47]
["cellular response to organic cyclic compound",27]
["cellular response to organic substance",85]
["cellular response to organonitrogen compound",9]
["cellular response to osmotic stress",8]
["cellular response to oxidative stress",23]
["cellular response to oxygen levels",5]
["cellular response to oxygen radical",1]
["cellular response to oxygen-containing compound",64]
["cellular response to ozone",1]
["cellular response to peptide",2]
["cellular response to peptide hormone stimulus",2]
["cellular response to pheromone",1]
["cellular response to phosphate starvation",19]
["cellular response to radiation",26]
["cellular response to reactive nitrogen species",3]
["cellular response to reactive oxygen species",8]
["cellular response to red or far red light",3]
["cellular response to redox state",1]
["cellular response to salicylic acid stimulus",10]
["cellular response to salt stress",5]
["cellular response to singlet oxygen",4]
["cellular response to starvation",40]
["cellular response to steroid hormone stimulus",6]
["cellular response to stimulus",365]
["cellular response to stress",216]
["cellular response to sucrose starvation",2]
["cellular response to sucrose stimulus",2]
["cellular response to sulfate starvation",1]
["cellular response to superoxide",1]
["cellular response to topologically incorrect protein",9]
["cellular response to toxic substance",14]
["cellular response to transforming growth factor beta stimulus",1]
["cellular response to trichostatin A",1]
["cellular response to unfolded protein",7]
["cellular response to UV",8]
["cellular response to UV-A",1]
["cellular response to UV-B",1]
["cellular response to UV-C",2]
["cellular response to virus",1]
["cellular response to water deprivation",4]
["cellular response to water stimulus",4]
["cellular transition metal ion homeostasis",5]
["cellular water homeostasis",1]
["cellular zinc ion homeostasis",1]
["cellular_component",1904]
["cellularization",1]
["cellulase activity",1]
["cellulose biosynthetic process",5]
["cellulose metabolic process",6]
["cellulose microfibril organization",1]
["central nervous system development",10]
["central nervous system neuron differentiation",2]
["central vacuole",1]
["centriolar satellite",1]
["centriole",4]
["centriole assembly",3]
["centriole replication",3]
["centromere complex assembly",3]
["centromeric sister chromatid cohesion",1]
["centrosome",5]
["centrosome cycle",4]
["centrosome duplication",4]
["centrosome separation",1]
["ceramide binding",1]
["ceramide biosynthetic process",4]
["ceramide catabolic process",1]
["ceramide metabolic process",5]
["ceramide transport",1]
["cerebral cortex neuron differentiation",1]
["channel activity",33]
["channel regulator activity",1]
["chaperone binding",4]
["chaperone cofactor-dependent protein refolding",3]
["chaperone complex",7]
["chaperone-mediated protein complex assembly",1]
["chaperone-mediated protein folding",19]
["chaperonin-containing T-complex",7]
["charged-tRNA amino acid modification",1]
["CHD-type complex",2]
["cheating during chimeric sorocarp development",1]
["checkpoint clamp complex",1]
["chemical homeostasis",54]
["chemical synaptic transmission",2]
["chemorepellent activity",1]
["chemotaxis",10]
["chemotaxis to cAMP",1]
["chiasma",1]
["chiasma assembly",3]
["chimeric colonial development",1]
["chimeric non-reproductive fruiting body development",1]
["chimeric sorocarp development",1]
["chitin binding",2]
["chitin catabolic process",1]
["chitin metabolic process",1]
["chitinase activity",1]
["chitosan binding",1]
["chloride channel activity",2]
["chloride transmembrane transport",2]
["chloride transmembrane transporter activity",2]
["chloride transport",2]
["chlorophyll binding",4]
["chlorophyll biosynthetic process",11]
["chlorophyll catabolic process",3]
["chlorophyll metabolic process",16]
["chlorophyll(ide) b reductase activity",1]
["chlorophyllide a oxygenase [overall] activity",1]
["chloroplast",470]
["chloroplast ATP synthase complex",1]
["chloroplast avoidance movement",1]
["chloroplast envelope",159]
["chloroplast fission",7]
["chloroplast inner membrane",23]
["chloroplast isoamylase complex",1]
["chloroplast localization",1]
["chloroplast membrane",41]
["chloroplast mRNA processing",1]
["chloroplast nucleoid",6]
["chloroplast organization",46]
["chloroplast outer membrane",14]
["chloroplast proton-transporting ATP synthase complex assembly",1]
["chloroplast relocation",1]
["chloroplast ribosome",1]
["chloroplast RNA modification",1]
["chloroplast RNA processing",1]
["chloroplast rRNA processing",2]
["chloroplast starch grain",3]
["chloroplast stroma",172]
["chloroplast stromal thylakoid",2]
["chloroplast thylakoid",80]
["chloroplast thylakoid lumen",2]
["chloroplast thylakoid membrane",60]
["chloroplast thylakoid membrane protein complex",5]
["chloroplast-nucleus signaling pathway",5]
["chloroplastic endopeptidase Clp complex",3]
["cholesterol binding",1]
["cholesterol biosynthetic process",1]
["cholesterol homeostasis",1]
["cholesterol metabolic process",1]
["cholesterol transport",1]
["choline biosynthetic process",1]
["choline metabolic process",1]
["choline transmembrane transporter activity",1]
["choline transport",1]
["chordate embryonic development",7]
["chorismate biosynthetic process",2]
["chorismate metabolic process",2]
["CHRAC",1]
["chromatin",59]
["chromatin assembly",7]
["chromatin assembly or disassembly",9]
["chromatin binding",22]
["chromatin disassembly",2]
["chromatin DNA binding",4]
["chromatin maintenance",1]
["chromatin organization",55]
["chromatin remodeling",17]
["chromatin silencing",8]
["chromatin silencing at telomere",1]
["chromatin silencing complex",2]
["chromatin-mediated maintenance of transcription",1]
["chromocenter",2]
["chromoplast",4]
["chromosomal region",21]
["chromosome",92]
["chromosome condensation",2]
["chromosome localization",11]
["chromosome movement towards spindle pole",4]
["chromosome organization",115]
["chromosome organization involved in meiotic cell cycle",9]
["chromosome passenger complex",1]
["chromosome segregation",36]
["chromosome separation",8]
["chromosome- centromeric region",12]
["chromosome- telomeric region",16]
["ciliary basal body",1]
["ciliary basal body-plasma membrane docking",1]
["ciliary base",2]
["ciliary membrane",1]
["ciliary plasm",6]
["ciliary pocket",1]
["ciliary pocket membrane",1]
["ciliary tip",1]
["ciliary transition zone",1]
["cilium",11]
["cilium assembly",9]
["cilium disassembly",1]
["cilium movement",4]
["cilium or flagellum-dependent cell motility",1]
["cilium organization",11]
["cilium-dependent cell motility",1]
["circadian regulation of calcium ion oscillation",1]
["circadian regulation of gene expression",2]
["circadian rhythm",16]
["circulatory system development",9]
["circumnutation",1]
["cis-Golgi network",1]
["cis-regulatory region sequence-specific DNA binding",3]
["cis-trans isomerase activity",20]
["citrate (Si)-synthase activity",1]
["citrate metabolic process",6]
["citrate synthase activity",1]
["citrate transmembrane transporter activity",1]
["citrate transport",1]
["clathrin adaptor complex",2]
["clathrin binding",4]
["clathrin coat",3]
["clathrin coat of coated pit",1]
["clathrin coat of endocytic vesicle",1]
["clathrin coat of trans-Golgi network vesicle",1]
["clathrin heavy chain binding",1]
["clathrin vesicle coat",3]
["clathrin-coated endocytic vesicle",1]
["clathrin-coated endocytic vesicle membrane",1]
["clathrin-coated pit",1]
["clathrin-coated vesicle",7]
["clathrin-coated vesicle cargo loading",1]
["clathrin-coated vesicle membrane",3]
["clathrin-dependent endocytosis",2]
["clathrin-dependent endocytosis involved in vitellogenesis",1]
["cleavage body",1]
["cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["cleavage involved in rRNA processing",11]
["cluster of actin-based cell projections",1]
["co-translational protein modification",1]
["CoA carboxylase activity",2]
["CoA-ligase activity",5]
["coagulation",3]
["coated membrane",8]
["coated vesicle",11]
["coated vesicle membrane",7]
["cobalt ion binding",8]
["cochlea development",1]
["coenzyme A biosynthetic process",1]
["coenzyme A metabolic process",1]
["coenzyme A transmembrane transport",1]
["coenzyme A transmembrane transporter activity",1]
["coenzyme A transport",1]
["cognition",3]
["cohesin complex",1]
["cold acclimation",5]
["columnar/cuboidal epithelial cell development",1]
["columnar/cuboidal epithelial cell differentiation",1]
["commitment complex",5]
["condensed chromosome",17]
["condensed chromosome- centromeric region",11]
["condensed nuclear chromosome",12]
["condensin complex",2]
["conidium development",1]
["conidium formation",1]
["conjugation",1]
["conjugation with cellular fusion",1]
["connective tissue development",1]
["contractile fiber",1]
["COP9 signalosome",1]
["COP9 signalosome assembly",2]
["COPI vesicle coat",1]
["COPI-coated vesicle",1]
["COPI-coated vesicle membrane",1]
["COPII vesicle coat",1]
["COPII-coated ER to Golgi transport vesicle",3]
["COPII-coated vesicle budding",1]
["COPII-coated vesicle cargo loading",1]
["copper ion binding",20]
["copper ion homeostasis",2]
["core mediator complex",4]
["core TFIIH complex portion of holo TFIIH complex",1]
["corolla development",1]
["cortical actin cytoskeleton",2]
["cortical cytoskeleton",4]
["cortical cytoskeleton organization",8]
["cortical granule",1]
["cortical granule exocytosis",1]
["cortical microtubule",2]
["cortical microtubule cytoskeleton",2]
["cortical microtubule organization",7]
["cortical microtubule- transverse to long axis",1]
["CORVET complex",5]
["cotranslational protein targeting to membrane",1]
["cotyledon development",5]
["cotyledon morphogenesis",3]
["cotyledon vascular tissue pattern formation",3]
["coumarin biosynthetic process",1]
["coumarin metabolic process",1]
["courtship behavior",1]
["covalent chromatin modification",32]
["cranial skeletal system development",1]
["CRD-mediated mRNA stability complex",1]
["CRD-mediated mRNA stabilization",1]
["cristae formation",1]
["Ctf18 RFC-like complex",4]
["Cul3-RING ubiquitin ligase complex",2]
["Cul4-RING E3 ubiquitin ligase complex",20]
["Cul4A-RING E3 ubiquitin ligase complex",3]
["Cul4B-RING E3 ubiquitin ligase complex",2]
["cullin-RING ubiquitin ligase complex",32]
["culmination involved in sorocarp development",1]
["CUT catabolic process",4]
["CUT metabolic process",4]
["cuticle development",9]
["cuticle hydrocarbon biosynthetic process",2]
["cutin biosynthetic process",2]
["cyclase activity",4]
["cyclic nucleotide-gated ion channel activity",2]
["cyclic-nucleotide-mediated signaling",1]
["cyclin binding",2]
["cyclin-dependent protein kinase activity",5]
["cyclin-dependent protein kinase holoenzyme complex",2]
["cyclin-dependent protein serine/threonine kinase activity",5]
["cyclin-dependent protein serine/threonine kinase regulator activity",2]
["cyclo-ligase activity",1]
["cyclohydrolase activity",3]
["cyclosporin A binding",2]
["cystathionine beta-lyase activity",1]
["cystathionine gamma-lyase activity",2]
["cystathionine gamma-synthase activity",3]
["cysteine biosynthetic process",4]
["cysteine biosynthetic process from serine",1]
["cysteine biosynthetic process via cystathionine",1]
["cysteine catabolic process",1]
["cysteine desulfurase activity",1]
["cysteine metabolic process",5]
["cysteine synthase activity",1]
["cysteine-S-conjugate beta-lyase activity",1]
["cysteine-type endopeptidase activity",5]
["cysteine-type peptidase activity",9]
["cytidine catabolic process",1]
["cytidine deaminase activity",1]
["cytidine deamination",1]
["cytidine metabolic process",2]
["cytidine to uridine editing",1]
["cytidylyltransferase activity",2]
["cytochrome b6f complex assembly",3]
["cytochrome complex",1]
["cytochrome complex assembly",5]
["cytochrome-b5 reductase activity- acting on NAD(P)H",1]
["cytochrome-c peroxidase activity",4]
["cytokine binding",1]
["cytokinesis",20]
["cytokinesis by cell plate formation",10]
["cytokinetic process",11]
["cytokinin catabolic process",1]
["cytokinin dehydrogenase activity",1]
["cytokinin metabolic process",3]
["cytokinin-activated signaling pathway",4]
["cytoplasm",1478]
["cytoplasm organization",1]
["cytoplasm to vacuole transport by the Cvt pathway",3]
["cytoplasmic chromosome",5]
["cytoplasmic exosome (RNase complex)",5]
["cytoplasmic microtubule",2]
["cytoplasmic microtubule depolymerization",1]
["cytoplasmic microtubule organization",11]
["cytoplasmic region",17]
["cytoplasmic ribonucleoprotein granule",17]
["cytoplasmic RNA surveillance",1]
["cytoplasmic side of endoplasmic reticulum membrane",4]
["cytoplasmic side of endosome membrane",1]
["cytoplasmic side of membrane",8]
["cytoplasmic side of plasma membrane",3]
["cytoplasmic side of rough endoplasmic reticulum membrane",1]
["cytoplasmic stress granule",6]
["cytoplasmic translation",9]
["cytoplasmic translational initiation",4]
["cytoplasmic translational termination",1]
["cytoplasmic ubiquitin ligase complex",1]
["cytoplasmic vesicle",115]
["cytoplasmic vesicle lumen",1]
["cytoplasmic vesicle membrane",12]
["cytosine metabolic process",1]
["cytoskeletal protein binding",32]
["cytoskeleton",60]
["cytoskeleton organization",59]
["cytoskeleton-dependent cytokinesis",19]
["cytoskeleton-dependent intracellular transport",6]
["cytosol",369]
["cytosol to endoplasmic reticulum transport",1]
["cytosolic calcium ion transport",1]
["cytosolic large ribosomal subunit",6]
["cytosolic proteasome complex",3]
["cytosolic ribosome",20]
["cytosolic small ribosomal subunit",7]
["cytosolic transport",11]
["D-amino acid biosynthetic process",1]
["D-amino acid metabolic process",1]
["D-arabinose 1-dehydrogenase [NAD(P)+] activity",1]
["D-cysteine desulfhydrase activity",1]
["D-erythro-sphingosine kinase activity",3]
["D-lactate dehydrogenase (cytochrome) activity",2]
["D-lactate dehydrogenase activity",1]
["D-serine ammonia-lyase activity",1]
["D-serine biosynthetic process",1]
["D-serine metabolic process",1]
["D-xylose metabolic process",1]
["damaged DNA binding",13]
["dauer entry",1]
["dauer larval development",1]
["Dcp1-Dcp2 complex",1]
["de-etiolation",2]
["deacetylase activity",1]
["DEAD/H-box RNA helicase binding",1]
["deadenylation-dependent decapping of nuclear-transcribed mRNA",4]
["deadenylation-independent decapping of nuclear-transcribed mRNA",2]
["deaminase activity",2]
["defense response",96]
["defense response by callose deposition",5]
["defense response by callose deposition in cell wall",5]
["defense response by cell wall thickening",5]
["defense response to bacterium",57]
["defense response to fungus",38]
["defense response to Gram-negative bacterium",1]
["defense response to insect",1]
["defense response to oomycetes",1]
["defense response to other organism",110]
["defense response to virus",4]
["dehiscence",4]
["dehydro-D-arabinono-1-4-lactone biosynthetic process",1]
["dehydro-D-arabinono-1-4-lactone metabolic process",1]
["delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity",1]
["delta DNA polymerase complex",2]
["delta14-sterol reductase activity",1]
["delta3-5-delta2-4-dienoyl-CoA isomerase activity",1]
["demethylase activity",2]
["demethylation",7]
["dendrite",1]
["dendrite development",2]
["dendrite morphogenesis",1]
["dendritic shaft",1]
["dendritic spine",1]
["dendritic tree",1]
["dense core granule maturation",1]
["deoxycytidine deaminase activity",1]
["deoxycytidine kinase activity",1]
["deoxyhypusine monooxygenase activity",1]
["deoxyhypusine synthase activity",1]
["deoxynucleoside kinase activity",2]
["deoxyribodipyrimidine photo-lyase activity",1]
["deoxyribonuclease activity",11]
["deoxyribonucleoside metabolic process",1]
["deoxyribonucleoside monophosphate biosynthetic process",2]
["deoxyribonucleoside monophosphate metabolic process",2]
["deoxyribonucleotide catabolic process",1]
["deoxyribonucleotide metabolic process",1]
["deoxyribose phosphate catabolic process",1]
["deoxyribose phosphate metabolic process",1]
["dephosphorylation",52]
["dephosphorylation of RNA polymerase II C-terminal domain",1]
["depurination",1]
["depyrimidination",1]
["Derlin-1 retrotranslocation complex",3]
["detection of abiotic stimulus",5]
["detection of biotic stimulus",1]
["detection of brassinosteroid stimulus",1]
["detection of chemical stimulus",6]
["detection of endogenous stimulus",3]
["detection of ethylene stimulus",2]
["detection of external biotic stimulus",1]
["detection of external stimulus",5]
["detection of gravity",2]
["detection of hormone stimulus",3]
["detection of light stimulus",2]
["detection of mechanical stimulus",1]
["detection of molecule of bacterial origin",1]
["detection of molecule of fungal origin",1]
["detection of nutrient",1]
["detection of oxidative stress",1]
["detection of peptidoglycan",1]
["detection of phosphate ion",1]
["detection of stimulus",13]
["determination of bilateral symmetry",4]
["determination of digestive tract left/right asymmetry",1]
["determination of heart left/right asymmetry",1]
["determination of left/right symmetry",3]
["determination of liver left/right asymmetry",1]
["determination of pancreatic left/right asymmetry",1]
["dethiobiotin synthase activity",1]
["detoxification",15]
["detoxification of cadmium ion",1]
["detoxification of inorganic compound",1]
["deubiquitinase activator activity",1]
["deubiquitinase activity",2]
["development of primary female sexual characteristics",1]
["development of primary sexual characteristics",2]
["developmental cell growth",19]
["developmental growth",54]
["developmental growth involved in morphogenesis",45]
["developmental induction",1]
["developmental maturation",27]
["developmental process",441]
["developmental process involved in reproduction",186]
["developmental vegetative growth",2]
["diacylglycerol biosynthetic process",2]
["diacylglycerol catabolic process",1]
["diacylglycerol cholinephosphotransferase activity",1]
["diacylglycerol kinase activity",2]
["diacylglycerol metabolic process",3]
["diadenosine polyphosphate biosynthetic process",1]
["diadenosine polyphosphate metabolic process",1]
["diadenosine tetraphosphate biosynthetic process",1]
["diadenosine tetraphosphate metabolic process",1]
["dicarboxylic acid biosynthetic process",4]
["dicarboxylic acid catabolic process",3]
["dicarboxylic acid metabolic process",18]
["dicarboxylic acid transmembrane transporter activity",5]
["dicarboxylic acid transport",5]
["digestive system development",1]
["digestive tract development",1]
["dihydrobiopterin metabolic process",1]
["dihydrofolate biosynthetic process",1]
["dihydrofolate metabolic process",1]
["dihydrofolate synthase activity",1]
["dihydrokaempferol 4-reductase activity",1]
["dihydrolipoamide branched chain acyltransferase activity",1]
["dihydrolipoamide S-acyltransferase activity",1]
["dihydrolipoyl dehydrogenase activity",1]
["dihydrolipoyl dehydrogenase complex",2]
["dihydroorotase activity",1]
["dihydroorotate dehydrogenase activity",1]
["dihydropteroate synthase activity",1]
["dihydropyrimidinase activity",1]
["dihydropyrimidine dehydrogenase (NADP+) activity",1]
["dihydrouracil dehydrogenase (NAD+) activity",1]
["dihydroxy-acid dehydratase activity",1]
["dimethylallyltranstransferase activity",1]
["diol biosynthetic process",5]
["diol metabolic process",5]
["dioxygenase activity",7]
["dipeptidase activity",1]
["dipeptidyl-peptidase activity",3]
["diphosphate-fructose-6-phosphate 1-phosphotransferase activity",1]
["diphosphomevalonate decarboxylase activity",1]
["diphosphoric monoester hydrolase activity",1]
["diphosphotransferase activity",5]
["diphthine synthase activity",1]
["disaccharide biosynthetic process",4]
["disaccharide catabolic process",6]
["disaccharide metabolic process",13]
["disaccharide transmembrane transporter activity",2]
["disaccharide transport",3]
["disordered domain specific binding",2]
["disruption by organism of cellular component in other organism involved in symbiotic interaction",1]
["disruption by symbiont of host cellular component",1]
["distal axon",2]
["disulfide oxidoreductase activity",6]
["diterpene phytoalexin biosynthetic process",1]
["diterpene phytoalexin metabolic process",1]
["diterpenoid biosynthetic process",6]
["diterpenoid metabolic process",6]
["divalent inorganic anion homeostasis",4]
["divalent inorganic cation homeostasis",9]
["division septum",2]
["DNA (6-4) photolyase activity",1]
["DNA (cytosine-5-)-methyltransferase activity",1]
["DNA alkylation",5]
["DNA amplification",1]
["DNA binding",100]
["DNA biosynthetic process",14]
["DNA catabolic process",1]
["DNA clamp loader activity",1]
["DNA conformation change",32]
["DNA damage checkpoint signaling",10]
["DNA damage response- detection of DNA damage",2]
["DNA damage response- signal transduction by p53 class mediator",1]
["DNA damage response- signal transduction by p53 class mediator resulting in cell cycle arrest",1]
["DNA dealkylation",3]
["DNA deamination",1]
["DNA demethylation",3]
["DNA double-strand break processing",2]
["DNA duplex unwinding",18]
["DNA endoreduplication",3]
["DNA geometric change",19]
["DNA helicase activity",20]
["DNA helicase complex",1]
["DNA insertion or deletion binding",2]
["DNA integration",2]
["DNA integrity checkpoint signaling",11]
["DNA ligase (ATP) activity",1]
["DNA ligase activity",1]
["DNA ligation",1]
["DNA ligation involved in DNA repair",1]
["DNA mediated transformation",3]
["DNA metabolic process",114]
["DNA methylation",5]
["DNA methylation on adenine",1]
["DNA methylation on cytosine",2]
["DNA methylation on cytosine within a CG sequence",1]
["DNA methylation on cytosine within a CNG sequence",1]
["DNA methylation or demethylation",7]
["DNA modification",9]
["DNA N-glycosylase activity",3]
["DNA packaging",11]
["DNA packaging complex",1]
["DNA photolyase activity",2]
["DNA polymerase activity",3]
["DNA polymerase binding",1]
["DNA polymerase complex",3]
["DNA primase activity",1]
["DNA recombinase assembly",4]
["DNA recombinase mediator complex",1]
["DNA recombination",32]
["DNA repair",77]
["DNA repair complex",8]
["DNA repair complex assembly",4]
["DNA replication",36]
["DNA replication checkpoint signaling",1]
["DNA replication factor C complex",5]
["DNA replication initiation",5]
["DNA replication origin binding",6]
["DNA replication preinitiation complex",4]
["DNA replication preinitiation complex assembly",1]
["DNA replication proofreading",1]
["DNA replication- Okazaki fragment processing",1]
["DNA replication- removal of RNA primer",1]
["DNA replication- synthesis of RNA primer",1]
["DNA replication-independent nucleosome assembly",2]
["DNA replication-independent nucleosome organization",2]
["DNA rewinding",1]
["DNA secondary structure binding",6]
["DNA strand elongation",3]
["DNA strand elongation involved in DNA replication",3]
["DNA strand exchange activity",4]
["DNA synthesis involved in DNA repair",8]
["DNA topoisomerase activity",3]
["DNA topoisomerase binding",1]
["DNA topoisomerase type I (single strand cut- ATP-independent) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activator activity",1]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) regulator activity",1]
["DNA topological change",2]
["DNA translocase activity",1]
["DNA unwinding involved in DNA replication",5]
["DNA-(apurinic or apyrimidinic site) endonuclease activity",2]
["DNA-binding transcription activator activity- RNA polymerase II-specific",1]
["DNA-binding transcription factor activity",42]
["DNA-binding transcription factor activity- RNA polymerase II-specific",8]
["DNA-binding transcription factor binding",4]
["DNA-binding transcription repressor activity- RNA polymerase II-specific",2]
["DNA-dependent DNA replication",33]
["DNA-dependent DNA replication maintenance of fidelity",4]
["DNA-directed 5'-3' RNA polymerase activity",3]
["DNA-directed DNA polymerase activity",3]
["DNA-directed RNA polymerase complex",21]
["DNA-methyltransferase activity",2]
["DNA-N1-methyladenine dioxygenase activity",1]
["DNA-templated transcription- elongation",3]
["DNA-templated transcription- initiation",8]
["DNA-templated transcription- termination",3]
["dodecenoyl-CoA delta-isomerase activity",2]
["dolichol kinase activity",1]
["dolichol-linked oligosaccharide biosynthetic process",4]
["dolichyl diphosphate biosynthetic process",2]
["dolichyl diphosphate metabolic process",2]
["dolichyl monophosphate biosynthetic process",1]
["dolichyl pyrophosphate Man9GlcNAc2 alpha-1-3-glucosyltransferase activity",2]
["dolichyl-diphosphooligosaccharide-protein glycotransferase activity",3]
["dolichyl-phosphate beta-D-mannosyltransferase activity",1]
["dolichyldiphosphatase activity",1]
["dormancy process",3]
["dorsal/ventral pattern formation",2]
["dorsal/ventral pattern formation- imaginal disc",1]
["dosage compensation",2]
["dosage compensation by inactivation of X chromosome",2]
["double fertilization forming a zygote and endosperm",3]
["double-strand break repair",29]
["double-strand break repair via break-induced replication",2]
["double-strand break repair via homologous recombination",16]
["double-strand break repair via nonhomologous end joining",7]
["double-strand break repair via synthesis-dependent strand annealing",5]
["double-strand/single-strand DNA junction binding",1]
["double-stranded DNA 3'-5' exodeoxyribonuclease activity",1]
["double-stranded DNA binding",32]
["double-stranded DNA exodeoxyribonuclease activity",1]
["double-stranded RNA binding",2]
["double-stranded telomeric DNA binding",2]
["drug binding",60]
["drug catabolic process",19]
["drug metabolic process",93]
["drug transmembrane transport",19]
["drug transport",22]
["dsRNA processing",8]
["dsRNA transport",2]
["dynein complex binding",2]
["ear development",2]
["ear morphogenesis",1]
["early endosome",21]
["early endosome membrane",4]
["early endosome to late endosome transport",3]
["early phagosome",1]
["early phagosome membrane",1]
["EARP complex",1]
["ectodermal placode development",1]
["ectodermal placode formation",1]
["ectodermal placode morphogenesis",1]
["efflux transmembrane transporter activity",3]
["egg activation",1]
["eggshell formation",1]
["EKC/KEOPS complex",2]
["electron transfer activity",4]
["electron transfer flavoprotein complex",1]
["electron transport chain",18]
["electron transporter- transferring electrons within the cyclic electron transport pathway of photosynthesis activity",1]
["electron transporter- transferring electrons within the noncyclic electron transport pathway of photosynthesis activity",1]
["electron-transferring-flavoprotein dehydrogenase activity",1]
["elongator holoenzyme complex",2]
["embryo development",104]
["embryo development ending in birth or egg hatching",12]
["embryo development ending in seed dormancy",80]
["embryo sac cellularization",1]
["embryo sac central cell differentiation",3]
["embryo sac development",24]
["embryonic appendage morphogenesis",3]
["embryonic axis specification",3]
["embryonic cranial skeleton morphogenesis",1]
["embryonic development via the syncytial blastoderm",1]
["embryonic digit morphogenesis",2]
["embryonic epithelial tube formation",1]
["embryonic heart tube development",1]
["embryonic heart tube morphogenesis",1]
["embryonic limb morphogenesis",2]
["embryonic meristem development",8]
["embryonic meristem initiation",5]
["embryonic morphogenesis",16]
["embryonic neurocranium morphogenesis",1]
["embryonic organ development",3]
["embryonic organ morphogenesis",3]
["embryonic pattern specification",6]
["embryonic pectoral fin morphogenesis",1]
["embryonic shoot morphogenesis",1]
["embryonic skeletal system development",1]
["embryonic skeletal system morphogenesis",1]
["EMC complex",1]
["endocytic patch",1]
["endocytic recycling",5]
["endocytic vesicle",7]
["endocytic vesicle membrane",2]
["endocytosis",16]
["endodeoxyribonuclease activity",8]
["endodeoxyribonuclease activity- producing 3'-phosphomonoesters",3]
["endodeoxyribonuclease activity- producing 5'-phosphomonoesters",2]
["endoderm development",3]
["endoderm formation",3]
["endodermal cell differentiation",1]
["endodermal cell fate commitment",1]
["endomembrane system",381]
["endomembrane system organization",19]
["endonuclease activity",32]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters",3]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",4]
["endonuclease complex",1]
["endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",4]
["endonucleolytic cleavage involved in rRNA processing",7]
["endonucleolytic cleavage involved in tRNA processing",1]
["endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",6]
["endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["endopeptidase activator activity",1]
["endopeptidase activity",22]
["endopeptidase Clp complex",3]
["endopeptidase complex",20]
["endopeptidase inhibitor activity",1]
["endopeptidase regulator activity",2]
["endoplasmic reticulum",176]
["endoplasmic reticulum calcium ion homeostasis",1]
["endoplasmic reticulum chaperone complex",1]
["endoplasmic reticulum exit site",1]
["endoplasmic reticulum lumen",8]
["endoplasmic reticulum membrane",75]
["endoplasmic reticulum membrane organization",1]
["endoplasmic reticulum organization",4]
["endoplasmic reticulum palmitoyltransferase complex",2]
["endoplasmic reticulum quality control compartment",1]
["endoplasmic reticulum Sec complex",1]
["endoplasmic reticulum stress-induced pre-emptive quality control",1]
["endoplasmic reticulum subcompartment",76]
["endoplasmic reticulum to cytosol transport",2]
["endoplasmic reticulum to Golgi vesicle-mediated transport",8]
["endoplasmic reticulum tubular network",1]
["endoplasmic reticulum unfolded protein response",7]
["endoribonuclease activity",7]
["endoribonuclease activity- producing 5'-phosphomonoesters",2]
["endoribonuclease complex",1]
["endosomal transport",17]
["endosomal vesicle fusion",2]
["endosome",92]
["endosome membrane",24]
["endosome organization",3]
["endosome to lysosome transport",8]
["endosome to lysosome transport via multivesicular body sorting pathway",3]
["endosome transport via multivesicular body sorting pathway",6]
["endosperm development",3]
["endothelial cell development",1]
["endothelial cell differentiation",1]
["endothelial cell morphogenesis",1]
["endothelium development",1]
["energy coupled proton transport- down electrochemical gradient",1]
["energy derivation by oxidation of organic compounds",31]
["energy homeostasis",1]
["energy quenching",1]
["energy reserve metabolic process",13]
["enone reductase activity",1]
["enoyl-CoA hydratase activity",5]
["ensheathment of neurons",1]
["ent-cassa-12-15-diene 11-hydroxylase activity",1]
["ent-kaurenoate oxidase activity",1]
["enteric nervous system development",1]
["entrainment of circadian clock",2]
["entry into diapause",1]
["envelope",246]
["enzyme activator activity",22]
["enzyme binding",90]
["enzyme inhibitor activity",9]
["enzyme linked receptor protein signaling pathway",16]
["enzyme regulator activity",47]
["enzyme-directed rRNA 2'-O-methylation",1]
["enzyme-directed rRNA pseudouridine synthesis",3]
["epidermal cell differentiation",2]
["epidermal cell fate specification",1]
["epidermal growth factor catabolic process",1]
["epidermal stem cell homeostasis",1]
["epidermis development",4]
["epithelial cell development",2]
["epithelial cell differentiation",5]
["epithelial cell differentiation involved in prostate gland development",1]
["epithelial cell migration",1]
["epithelial cell morphogenesis",1]
["epithelial cilium movement involved in determination of left/right asymmetry",1]
["epithelial cilium movement involved in extracellular fluid movement",1]
["epithelial tube formation",1]
["epithelial tube morphogenesis",4]
["epithelium development",14]
["epithelium migration",1]
["epoxide hydrolase activity",1]
["epsilon DNA polymerase complex",1]
["equatorial cell cortex",1]
["equatorial microtubule organizing center",1]
["ER body organization",1]
["ER overload response",1]
["ER to Golgi transport vesicle membrane",3]
["ER ubiquitin ligase complex",1]
["ER-associated misfolded protein catabolic process",2]
["ER-nucleus signaling pathway",2]
["ERAD pathway",14]
["ERCC4-ERCC1 complex",1]
["error-free translesion synthesis",2]
["error-prone translesion synthesis",4]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process",2]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process",1]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",4]
["ESC/E(Z) complex",1]
["ESCRT complex",5]
["ESCRT I complex",1]
["ESCRT II complex",2]
["ESCRT III complex",2]
["establishment of cell polarity",3]
["establishment of chromosome localization",10]
["establishment of localization",341]
["establishment of localization in cell",130]
["establishment of mitochondrion localization",3]
["establishment of mitochondrion localization- microtubule-mediated",3]
["establishment of mitotic spindle localization",1]
["establishment of organelle localization",18]
["establishment of planar polarity",1]
["establishment of plastid localization",1]
["establishment of protein localization",98]
["establishment of protein localization to chloroplast",9]
["establishment of protein localization to endoplasmic reticulum",4]
["establishment of protein localization to membrane",11]
["establishment of protein localization to mitochondrial membrane",1]
["establishment of protein localization to mitochondrion",8]
["establishment of protein localization to organelle",52]
["establishment of protein localization to peroxisome",5]
["establishment of protein localization to plasma membrane",1]
["establishment of protein localization to vacuole",12]
["establishment of protein-containing complex localization to telomere",1]
["establishment of RNA localization",22]
["establishment of spindle localization",1]
["establishment of tissue polarity",1]
["establishment of vesicle localization",2]
["establishment or maintenance of cell polarity",5]
["establishment or maintenance of cytoskeleton polarity",1]
["establishment or maintenance of microtubule cytoskeleton polarity",1]
["ethanolamine-containing compound metabolic process",1]
["ether hydrolase activity",1]
["ethylene binding",2]
["ethylene biosynthetic process",1]
["ethylene metabolic process",1]
["ethylene receptor activity",2]
["ethylene-activated signaling pathway",12]
["etioplast organization",2]
["euchromatin",3]
["eukaryotic 48S preinitiation complex",2]
["eukaryotic translation initiation factor 2 complex",1]
["eukaryotic translation initiation factor 2B complex",5]
["eukaryotic translation initiation factor 3 complex",6]
["eukaryotic translation initiation factor 3 complex- eIF3m",1]
["excretion",1]
["exit from host",1]
["exit from host cell",1]
["exit from mitosis",3]
["exocrine system development",1]
["exocyst",3]
["exocyst assembly",1]
["exocyst localization",1]
["exocytic process",2]
["exocytic vesicle",2]
["exocytic vesicle membrane",1]
["exocytosis",14]
["exodeoxyribonuclease activity",4]
["exodeoxyribonuclease activity- producing 5'-phosphomonoesters",4]
["exon-exon junction complex",1]
["exonuclease activity",20]
["exonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",13]
["exonucleolytic catabolism of deadenylated mRNA",6]
["exonucleolytic trimming involved in rRNA processing",3]
["exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",3]
["exopeptidase activity",12]
["exoribonuclease activity",9]
["exoribonuclease activity- producing 5'-phosphomonoesters",9]
["exoribonuclease complex",10]
["exosomal secretion",1]
["exosome (RNase complex)",10]
["exploration behavior",1]
["export across plasma membrane",1]
["external encapsulating structure",65]
["external encapsulating structure organization",32]
["external side of cell wall",1]
["external side of plasma membrane",1]
["extracellular exosome",1]
["extracellular exosome biogenesis",1]
["extracellular matrix",1]
["extracellular matrix assembly",11]
["extracellular matrix disassembly",1]
["extracellular matrix organization",13]
["extracellular organelle",1]
["extracellular region",69]
["extracellular space",11]
["extracellular structure organization",13]
["extracellular vesicle",1]
["extracellular vesicle biogenesis",1]
["extrinsic component of cytoplasmic side of plasma membrane",3]
["extrinsic component of endoplasmic reticulum membrane",1]
["extrinsic component of endosome membrane",1]
["extrinsic component of lysosome membrane",1]
["extrinsic component of membrane",16]
["extrinsic component of mitochondrial inner membrane",1]
["extrinsic component of organelle membrane",4]
["extrinsic component of plasma membrane",3]
["extrinsic component of vacuolar membrane",1]
["eye development",2]
["eyelid development in camera-type eye",1]
["FAD binding",2]
["FAD biosynthetic process",1]
["FAD diphosphatase activity",1]
["FAD metabolic process",2]
["FAD transmembrane transport",1]
["FAD transmembrane transporter activity",1]
["farnesyl diphosphate biosynthetic process",1]
["farnesyl diphosphate metabolic process",3]
["farnesyl-diphosphate farnesyltransferase activity",1]
["farnesyltranstransferase activity",3]
["fat-soluble vitamin biosynthetic process",5]
["fat-soluble vitamin metabolic process",5]
["fatty acid beta-oxidation",13]
["fatty acid beta-oxidation using acyl-CoA dehydrogenase",4]
["fatty acid binding",1]
["fatty acid biosynthetic process",15]
["fatty acid catabolic process",14]
["fatty acid derivative binding",1]
["fatty acid derivative biosynthetic process",7]
["fatty acid derivative catabolic process",1]
["fatty acid derivative metabolic process",11]
["fatty acid derivative transport",1]
["fatty acid elongase activity",2]
["fatty acid elongase complex",1]
["fatty acid elongation",2]
["fatty acid homeostasis",1]
["fatty acid in-chain hydroxylase activity",1]
["fatty acid ligase activity",3]
["fatty acid metabolic process",41]
["fatty acid omega-oxidation",1]
["fatty acid oxidation",14]
["fatty acid synthase activity",5]
["fatty acid transmembrane transporter activity",1]
["fatty acid transport",3]
["fatty-acyl-CoA binding",1]
["fatty-acyl-CoA biosynthetic process",1]
["fatty-acyl-CoA catabolic process",1]
["fatty-acyl-CoA metabolic process",3]
["fatty-acyl-CoA reductase (alcohol-forming) activity",1]
["female gamete generation",6]
["female gonad development",1]
["female mating behavior",1]
["female meiosis chromosome segregation",1]
["female meiotic nuclear division",2]
["female sex differentiation",1]
["ferric iron binding",2]
["ferric-chelate reductase activity",1]
["ferrous iron binding",2]
["ferroxidase activity",1]
["fertilization",4]
["fibrillar center",1]
["ficolin-1-rich granule",1]
["ficolin-1-rich granule lumen",1]
["fin development",2]
["fin morphogenesis",2]
["fin regeneration",1]
["FK506 binding",6]
["flagellated sperm motility",1]
["flap endonuclease activity",3]
["flap-structured DNA binding",1]
["flavin adenine dinucleotide binding",10]
["flavin adenine dinucleotide biosynthetic process",1]
["flavin adenine dinucleotide catabolic process",1]
["flavin adenine dinucleotide metabolic process",4]
["flavin-containing compound biosynthetic process",5]
["flavin-containing compound catabolic process",1]
["flavin-containing compound metabolic process",9]
["flavone biosynthetic process",1]
["flavone metabolic process",1]
["flavonoid biosynthetic process",7]
["flavonoid metabolic process",10]
["flavonoid transport from endoplasmic reticulum to plant-type vacuole",1]
["flavonol biosynthetic process",1]
["flavonol metabolic process",1]
["flavonol synthase activity",1]
["floral meristem determinacy",1]
["floral organ abscission",2]
["floral organ development",31]
["floral organ formation",6]
["floral organ morphogenesis",8]
["floral whorl development",25]
["flower calyx development",2]
["flower development",45]
["flower morphogenesis",1]
["fluid transport",3]
["FMN adenylyltransferase activity",2]
["FMN binding",1]
["FMN hydrolase activity",1]
["FMN transmembrane transporter activity",1]
["FMN-binding domain binding",1]
["folic acid transmembrane transporter activity",1]
["folic acid transport",1]
["folic acid-containing compound biosynthetic process",3]
["folic acid-containing compound metabolic process",4]
["forebrain development",5]
["forebrain morphogenesis",1]
["formation of anatomical boundary",1]
["formation of plant organ boundary",1]
["formation of primary germ layer",4]
["formation of translation preinitiation complex",1]
["four-way junction DNA binding",5]
["four-way junction helicase activity",3]
["frizzled binding",1]
["fructokinase activity",1]
["fructosamine metabolic process",1]
["fructose 1-6-bisphosphate 1-phosphatase activity",3]
["fructose 1-6-bisphosphate metabolic process",3]
["fructose 6-phosphate metabolic process",3]
["fructose export from vacuole to cytoplasm",1]
["fructose metabolic process",4]
["fructose transmembrane transport",1]
["fructose transmembrane transporter activity",1]
["fructose-bisphosphate aldolase activity",2]
["fruit development",103]
["fruit morphogenesis",1]
["fucose catabolic process",1]
["fucose metabolic process",1]
["fucosidase activity",1]
["fucosylation",2]
["fucosyltransferase activity",2]
["fumarate hydratase activity",1]
["fumarate metabolic process",1]
["fumarate reductase complex",1]
["fumarylacetoacetase activity",1]
["fumarylpyruvate hydrolase activity",1]
["fungal biofilm matrix",1]
["fungal-type cell wall",2]
["fungal-type cell wall disassembly",1]
["fungal-type cell wall disassembly involved in conjugation with cellular fusion",1]
["fungal-type cell wall organization",1]
["fungal-type cell wall organization or biogenesis",1]
["fungal-type vacuole",5]
["fungal-type vacuole membrane",3]
["fungiform papilla development",1]
["fungiform papilla formation",1]
["fungiform papilla morphogenesis",1]
["fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm",1]
["G protein-coupled receptor activity",2]
["G protein-coupled receptor binding",4]
["G protein-coupled receptor signaling pathway",7]
["G protein-coupled receptor signaling pathway- coupled to cyclic nucleotide second messenger",3]
["G-protein beta/gamma-subunit complex binding",1]
["G-quadruplex DNA binding",1]
["G-quadruplex DNA unwinding",1]
["G-rich single-stranded DNA binding",1]
["G1/S transition of mitotic cell cycle",3]
["G2/M transition of mitotic cell cycle",3]
["GAIT complex",2]
["galactokinase activity",1]
["galactolipase activity",1]
["galactolipid biosynthetic process",4]
["galactolipid metabolic process",5]
["galactonolactone dehydrogenase activity",1]
["galactose catabolic process",2]
["galactose metabolic process",3]
["galactose-1-phosphate phosphatase activity",1]
["galactosidase activity",4]
["galactosyltransferase activity",13]
["galactosylxylosylprotein 3-beta-galactosyltransferase activity",1]
["galacturonan metabolic process",10]
["gamete generation",22]
["gametophyte development",68]
["gamma-aminobutyric acid catabolic process",2]
["gamma-aminobutyric acid metabolic process",2]
["gamma-secretase complex",1]
["gamma-tubulin binding",1]
["gamma-tubulin complex",1]
["gamma-tubulin complex localization",1]
["gamma-tubulin small complex",1]
["ganglioside binding",1]
["ganglioside GM1 binding",1]
["ganglioside GM1 transport to membrane",1]
["ganglioside GM2 binding",1]
["ganglioside GM3 binding",1]
["ganglioside GP1c binding",1]
["ganglioside GT1b binding",1]
["GARP complex",2]
["gastrulation",5]
["gated channel activity",11]
["GDP binding",3]
["GDP biosynthetic process",1]
["GDP metabolic process",1]
["GDP-dissociation inhibitor activity",1]
["GDP-fucose transmembrane transport",3]
["GDP-fucose transmembrane transporter activity",3]
["GDP-L-fucose biosynthetic process",1]
["GDP-L-fucose metabolic process",1]
["GDP-Man:Man3GlcNAc2-PP-Dol alpha-1-2-mannosyltransferase activity",2]
["GDP-mannose 4-6-dehydratase activity",1]
["GDP-mannose transmembrane transport",1]
["GDP-mannose transmembrane transporter activity",1]
["Gemini of coiled bodies",1]
["gene conversion",3]
["gene expression",242]
["gene silencing",24]
["gene silencing by miRNA",9]
["gene silencing by RNA",17]
["gene silencing by RNA-directed DNA methylation",1]
["generation of catalytic spliceosome for first transesterification step",2]
["generation of neurons",13]
["generation of precursor metabolites and energy",69]
["generative cell differentiation",1]
["genetic imprinting",3]
["genetic transfer",3]
["geranylgeranyl diphosphate metabolic process",1]
["geranylgeranyl reductase activity",1]
["geranylgeranyl-diphosphate geranylgeranyltransferase activity",1]
["geranyltranstransferase activity",2]
["germ cell development",6]
["germ cell migration",1]
["germ plasm",1]
["germ-line stem-cell niche homeostasis",1]
["germline cell cycle switching- mitotic to meiotic cell cycle",1]
["gibberellic acid homeostasis",1]
["gibberellic acid mediated signaling pathway",3]
["gibberellin biosynthetic process",5]
["gibberellin mediated signaling pathway",3]
["gibberellin metabolic process",5]
["GID complex",1]
["gland development",4]
["glial cell development",2]
["glial cell differentiation",4]
["glial cell migration",1]
["glial cell proliferation",1]
["gliogenesis",4]
["global genome nucleotide-excision repair",3]
["glucan 1-3-alpha-glucosidase activity",1]
["glucan biosynthetic process",15]
["glucan catabolic process",14]
["glucan endo-1-3-beta-D-glucosidase activity",2]
["glucan metabolic process",34]
["gluconeogenesis",7]
["glucosamine-containing compound catabolic process",1]
["glucosamine-containing compound metabolic process",1]
["glucose 6-phosphate metabolic process",4]
["glucose binding",1]
["glucose catabolic process",1]
["glucose catabolic process to pyruvate",1]
["glucose import",5]
["glucose metabolic process",12]
["glucose transmembrane transport",6]
["glucose transmembrane transporter activity",6]
["glucose-1-phosphate adenylyltransferase activity",1]
["glucose-6-phosphate dehydrogenase activity",2]
["glucose-6-phosphate isomerase activity",1]
["glucosidase activity",6]
["glucoside transmembrane transporter activity",1]
["glucoside transport",1]
["glucosinolate biosynthetic process",3]
["glucosinolate biosynthetic process from homomethionine",1]
["glucosinolate catabolic process",3]
["glucosinolate metabolic process",7]
["glucosyltransferase activity",10]
["glucuronate-1-phosphate uridylyltransferase activity",1]
["glucuronosyltransferase activity",4]
["glucuronoxylan biosynthetic process",3]
["glucuronoxylan glucuronosyltransferase activity",1]
["glucuronoxylan metabolic process",3]
["glutamate biosynthetic process",1]
["glutamate catabolic process",2]
["glutamate decarboxylation to succinate",2]
["glutamate dehydrogenase (NADP+) activity",1]
["glutamate dehydrogenase [NAD(P)+] activity",1]
["glutamate metabolic process",8]
["glutamate N-acetyltransferase activity",1]
["glutamate receptor activity",1]
["glutamate-1-semialdehyde 2-1-aminomutase activity",1]
["glutamate-prephenate aminotransferase activity",1]
["glutamate-tRNA ligase activity",1]
["glutamine family amino acid biosynthetic process",6]
["glutamine family amino acid catabolic process",4]
["glutamine family amino acid metabolic process",14]
["glutamine metabolic process",3]
["glutamine-tRNA ligase activity",1]
["glutaminyl-peptide cyclotransferase activity",1]
["glutaminyl-tRNA aminoacylation",1]
["glutamyl-tRNA aminoacylation",2]
["glutathione binding",1]
["glutathione catabolic process",1]
["glutathione dehydrogenase (ascorbate) activity",1]
["glutathione disulfide oxidoreductase activity",3]
["glutathione gamma-glutamylcysteinyltransferase activity",2]
["glutathione hydrolase activity",1]
["glutathione metabolic process",4]
["glutathione transferase activity",3]
["glutathione transmembrane transport",1]
["glutathione transport",2]
["glutathione-disulfide reductase (NADPH) activity",2]
["glyceraldehyde-3-phosphate biosynthetic process",1]
["glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate metabolic process",9]
["glycerate dehydrogenase activity",2]
["glycerate transmembrane transport",1]
["glycerate transmembrane transporter activity",1]
["glycerol biosynthetic process",1]
["glycerol catabolic process",2]
["glycerol kinase activity",1]
["glycerol metabolic process",4]
["glycerol-3-phosphatase activity",1]
["glycerol-3-phosphate dehydrogenase (quinone) activity",1]
["glycerol-3-phosphate metabolic process",2]
["glycerol-3-phosphate O-acyltransferase activity",1]
["glycerolipid biosynthetic process",18]
["glycerolipid catabolic process",4]
["glycerolipid metabolic process",28]
["glycerophosphate shuttle",1]
["glycerophospholipid biosynthetic process",13]
["glycerophospholipid catabolic process",1]
["glycerophospholipid metabolic process",20]
["glycine binding",1]
["glycine biosynthetic process",1]
["glycine biosynthetic process- by transamination of glyoxylate",1]
["glycine catabolic process",1]
["glycine hydroxymethyltransferase activity",2]
["glycine metabolic process",2]
["glycine-tRNA ligase activity",1]
["glycine:2-oxoglutarate aminotransferase activity",1]
["glycogen (starch) synthase activity",1]
["glycogen binding",1]
["glycogen biosynthetic process",4]
["glycogen catabolic process",3]
["glycogen debranching enzyme activity",4]
["glycogen metabolic process",13]
["glycogen phosphorylase activity",2]
["glycogenin glucosyltransferase activity",2]
["glycolate dehydrogenase activity",1]
["glycolate oxidase activity",1]
["glycolate transmembrane transport",1]
["glycolate transmembrane transporter activity",1]
["glycolate transport",1]
["glycolipid binding",2]
["glycolipid biosynthetic process",13]
["glycolipid catabolic process",1]
["glycolipid mannosyltransferase activity",2]
["glycolipid metabolic process",16]
["glycolipid transport",1]
["glycolytic process",10]
["glycolytic process through fructose-6-phosphate",3]
["glycolytic process through glucose-6-phosphate",1]
["glycophagy",1]
["glycoprotein 2-beta-D-xylosyltransferase activity",1]
["glycoprotein 3-alpha-L-fucosyltransferase activity",1]
["glycoprotein biosynthetic process",35]
["glycoprotein catabolic process",1]
["glycoprotein metabolic process",42]
["glycosaminoglycan catabolic process",1]
["glycosaminoglycan metabolic process",1]
["glycoside catabolic process",1]
["glycoside metabolic process",1]
["glycoside transport",1]
["glycosinolate biosynthetic process",3]
["glycosinolate catabolic process",3]
["glycosinolate metabolic process",7]
["glycosphingolipid binding",1]
["glycosphingolipid catabolic process",1]
["glycosphingolipid metabolic process",2]
["glycosyl compound biosynthetic process",11]
["glycosyl compound catabolic process",5]
["glycosyl compound metabolic process",26]
["glycosylation",40]
["glycosylceramide catabolic process",1]
["glycosylceramide metabolic process",1]
["glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex",2]
["glycosyltransferase activity",62]
["glycyl-tRNA aminoacylation",1]
["glycylpeptide N-tetradecanoyltransferase activity",1]
["glyoxalase III activity",1]
["glyoxylate cycle",3]
["glyoxylate metabolic process",4]
["glyoxylate reductase (NADP+) activity",4]
["glyoxysome",5]
["GMP biosynthetic process",1]
["GMP metabolic process",2]
["GMP synthase (glutamine-hydrolyzing) activity",1]
["GMP synthase activity",1]
["Golgi apparatus",165]
["Golgi apparatus subcompartment",76]
["Golgi calcium ion homeostasis",1]
["Golgi calcium ion transmembrane transport",1]
["Golgi calcium ion transport",1]
["Golgi cisterna",4]
["Golgi medial cisterna",3]
["Golgi membrane",24]
["Golgi organization",9]
["Golgi stack",7]
["Golgi to endosome transport",1]
["Golgi to lysosome transport",1]
["Golgi to plasma membrane protein transport",1]
["Golgi to plasma membrane transport",3]
["Golgi to vacuole transport",4]
["Golgi trans cisterna",2]
["Golgi transport complex",3]
["Golgi vesicle budding",2]
["Golgi vesicle docking",1]
["Golgi vesicle prefusion complex stabilization",1]
["Golgi vesicle transport",24]
["Golgi-associated vesicle",11]
["Golgi-associated vesicle membrane",8]
["gonad development",2]
["GPI anchor biosynthetic process",5]
["GPI anchor metabolic process",5]
["GPI-anchor transamidase activity",1]
["GPI-anchor transamidase complex",3]
["Gram-positive-bacterium-type cell wall",1]
["granulocyte activation",4]
["gravitropism",8]
["Group II intron splicing",2]
["growing cell tip",2]
["growth",72]
["growth cone",1]
["GTP binding",15]
["GTP biosynthetic process",2]
["GTP cyclohydrolase activity",1]
["GTP cyclohydrolase I activity",1]
["GTP diphosphokinase activity",2]
["GTP metabolic process",3]
["GTP-dependent protein binding",1]
["GTPase activator activity",11]
["GTPase activity",27]
["GTPase binding",26]
["GTPase complex",2]
["GTPase inhibitor activity",1]
["GTPase regulator activity",13]
["guanine deaminase activity",1]
["guanine metabolic process",1]
["guanine/thymine mispair binding",1]
["guanosine tetraphosphate metabolic process",1]
["guanosine-3'-5'-bis(diphosphate) 3'-diphosphatase activity",1]
["guanosine-containing compound biosynthetic process",3]
["guanosine-containing compound metabolic process",5]
["guanosine-diphosphatase activity",1]
["guanyl nucleotide binding",15]
["guanyl ribonucleotide binding",15]
["guanyl-nucleotide exchange factor activity",11]
["guanylate kinase activity",1]
["guanylyltransferase activity",1]
["guard cell differentiation",1]
["guard cell fate commitment",1]
["guard mother cell cytokinesis",1]
["gynoecium development",15]
["H3 histone acetyltransferase activity",1]
["H3K27me3 modified histone binding",1]
["H4 histone acetyltransferase activity",2]
["H4K20me3 modified histone binding",1]
["hair cycle",2]
["hair cycle process",2]
["hair follicle development",2]
["hair follicle maturation",1]
["hair follicle placode formation",1]
["head development",6]
["heart development",4]
["heart formation",1]
["heart looping",1]
["heart morphogenesis",2]
["heat acclimation",2]
["heat shock protein binding",7]
["helicase activity",77]
["hematopoietic or lymphoid organ development",4]
["hematopoietic progenitor cell differentiation",1]
["heme binding",2]
["heme biosynthetic process",5]
["heme metabolic process",6]
["heme oxidation",1]
["heme oxygenase (decyclizing) activity",1]
["heme transport",1]
["hemicellulose metabolic process",7]
["hemopoiesis",2]
["hemostasis",3]
["heparan sulfate 6-O-sulfotransferase activity",1]
["heparan sulfate proteoglycan biosynthetic process",1]
["heparan sulfate proteoglycan biosynthetic process- enzymatic modification",1]
["heparan sulfate proteoglycan metabolic process",1]
["heparan sulfate sulfotransferase activity",1]
["hepaticobiliary system development",2]
["heterochromatin",8]
["heterochromatin assembly",3]
["heterochromatin assembly by small RNA",2]
["heterochromatin maintenance",1]
["heterochromatin organization",3]
["heterocycle biosynthetic process",153]
["heterocycle catabolic process",67]
["heterocycle metabolic process",496]
["heterocyclic compound binding",318]
["heteroduplex DNA loop binding",2]
["heteroduplex formation",1]
["heteropolysaccharide binding",1]
["heterotrimeric G-protein complex",2]
["hexokinase activity",1]
["hexosaminidase activity",1]
["hexose biosynthetic process",7]
["hexose catabolic process",4]
["hexose metabolic process",16]
["hexose transmembrane transport",6]
["hexose transmembrane transporter activity",6]
["hexosyltransferase activity",50]
["high-affinity arginine transmembrane transporter activity",1]
["high-affinity basic amino acid transmembrane transporter activity",1]
["high-affinity lysine transmembrane transporter activity",1]
["hippocampus development",2]
["histidine biosynthetic process",5]
["histidine metabolic process",5]
["histidine phosphotransfer kinase activity",1]
["histidinol-phosphatase activity",2]
["histoblast morphogenesis",1]
["histone acetylation",8]
["histone acetyltransferase activity",4]
["histone acetyltransferase activity (H4-K5 specific)",1]
["histone acetyltransferase complex",4]
["histone arginine methylation",6]
["histone binding",16]
["histone biotinylation",1]
["histone deacetylase activity",1]
["histone deacetylase activity (H4-K16 specific)",1]
["histone deacetylase binding",2]
["histone deacetylase complex",2]
["histone deacetylation",3]
["histone demethylase activity",1]
["histone demethylase activity (H3-K9 specific)",1]
["histone demethylation",2]
["histone exchange",2]
["histone H2A monoubiquitination",1]
["histone H2A ubiquitination",1]
["histone H3 acetylation",4]
["histone H3 deacetylation",2]
["histone H3-K27 methylation",3]
["histone H3-K27 trimethylation",1]
["histone H3-K36 methylation",2]
["histone H3-K4 methylation",6]
["histone H3-K4 trimethylation",2]
["histone H3-K9 acetylation",1]
["histone H3-K9 demethylation",2]
["histone H3-K9 methylation",1]
["histone H3-K9 modification",2]
["histone H3-R17 methylation",1]
["histone H3-R2 methylation",1]
["histone H3-R26 methylation",1]
["histone H3-S10 phosphorylation",1]
["histone H4 acetylation",5]
["histone H4 deacetylation",2]
["histone H4-K20 methylation",1]
["histone H4-K20 trimethylation",1]
["histone H4-K5 acetylation",1]
["histone H4-R3 methylation",2]
["histone kinase activity",1]
["histone kinase activity (H3-S10 specific)",1]
["histone lysine demethylation",2]
["histone lysine methylation",12]
["histone methylation",18]
["histone methyltransferase activity",11]
["histone methyltransferase activity (H3-K27 specific)",1]
["histone methyltransferase activity (H3-K36 specific)",1]
["histone methyltransferase activity (H3-K4 specific)",2]
["histone methyltransferase complex",4]
["histone modification",32]
["histone monoubiquitination",1]
["histone mRNA catabolic process",4]
["histone mRNA metabolic process",4]
["histone phosphorylation",1]
["histone pre-mRNA 3'end processing complex",1]
["histone serine kinase activity",1]
["histone ubiquitination",1]
["histone-arginine N-methyltransferase activity",5]
["histone-lysine N-methyltransferase activity",6]
["histone-serine phosphorylation",1]
["Holliday junction resolvase complex",1]
["homeostasis of number of cells",1]
["homeostatic process",76]
["homocysteine metabolic process",2]
["homogalacturonan biosynthetic process",1]
["homogalacturonan metabolic process",1]
["homogentisate catabolic process",2]
["homogentisate metabolic process",2]
["homologous chromosome pairing at meiosis",6]
["homologous chromosome segregation",9]
["homologous recombination",15]
["homomethionine metabolic process",1]
["homoserine biosynthetic process",1]
["homoserine dehydrogenase activity",1]
["homoserine metabolic process",2]
["HOPS complex",5]
["hormone binding",6]
["hormone biosynthetic process",16]
["hormone catabolic process",1]
["hormone metabolic process",21]
["hormone receptor binding",3]
["hormone transport",14]
["hormone-mediated signaling pathway",38]
["host cell",1]
["host cell nuclear part",1]
["host cell nucleus",1]
["host cell part",1]
["host cellular component",1]
["host intracellular membrane-bounded organelle",1]
["host intracellular organelle",1]
["host intracellular part",1]
["host intracellular region",1]
["Hrd1p ubiquitin ligase complex",1]
["HslUV protease complex",1]
["Hsp70 protein binding",3]
["Hsp90 protein binding",2]
["hydro-lyase activity",15]
["hydrogen peroxide biosynthetic process",3]
["hydrogen peroxide catabolic process",6]
["hydrogen peroxide mediated signaling pathway",1]
["hydrogen peroxide metabolic process",9]
["hydrolase activity",369]
["hydrolase activity- acting on acid anhydrides",149]
["hydrolase activity- acting on acid anhydrides- in phosphorus-containing anhydrides",149]
["hydrolase activity- acting on acid carbon-carbon bonds",2]
["hydrolase activity- acting on acid carbon-carbon bonds- in ketonic substances",2]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds",21]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amides",4]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amidines",5]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amides",7]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amidines",6]
["hydrolase activity- acting on ester bonds",126]
["hydrolase activity- acting on ether bonds",1]
["hydrolase activity- acting on glycosyl bonds",37]
["hydrolase activity- hydrolyzing N-glycosyl compounds",5]
["hydrolase activity- hydrolyzing O-glycosyl compounds",32]
["hydroquinone:oxygen oxidoreductase activity",2]
["hydroxyacylglutathione hydrolase activity",1]
["hydroxycinnamoyltransferase activity",1]
["hydroxyethylthiazole kinase activity",1]
["hydroxymethyl-- formyl- and related transferase activity",3]
["hydroxymethylbilane synthase activity",1]
["hydroxymethylglutaryl-CoA lyase activity",1]
["hydroxymethylpyrimidine kinase activity",1]
["hydroxyproline O-arabinosyltransferase activity",1]
["hydroxyproline O-galactosyltransferase activity",4]
["hydroxypyruvate reductase activity",3]
["hyperosmotic response",13]
["hyperosmotic salinity response",6]
["hypotonic response",3]
["hypotonic salinity response",2]
["I band",1]
["icosanoid biosynthetic process",1]
["icosanoid metabolic process",3]
["icosanoid secretion",1]
["icosanoid transport",1]
["identical protein binding",80]
["IgE binding",2]
["imaginal disc development",4]
["imaginal disc morphogenesis",1]
["imaginal disc pattern formation",1]
["imidazole-containing compound metabolic process",5]
["imidazoleglycerol-phosphate dehydratase activity",1]
["immune effector process",12]
["immune response",43]
["immune response-activating cell surface receptor signaling pathway",3]
["immune response-activating signal transduction",4]
["immune response-regulating cell surface receptor signaling pathway",3]
["immune response-regulating signaling pathway",4]
["immune system development",5]
["immune system process",62]
["immunoglobulin binding",2]
["immunoglobulin production",1]
["IMP biosynthetic process",1]
["IMP dehydrogenase activity",1]
["IMP metabolic process",2]
["import across plasma membrane",1]
["import into cell",17]
["import into nucleus",14]
["in utero embryonic development",4]
["inactivation of MAPK activity",3]
["inclusion body assembly",1]
["indolalkylamine biosynthetic process",2]
["indolalkylamine catabolic process",2]
["indolalkylamine metabolic process",4]
["indole glucosinolate catabolic process",2]
["indole glucosinolate metabolic process",2]
["indole-3-glycerol-phosphate synthase activity",1]
["indole-containing compound biosynthetic process",2]
["indole-containing compound catabolic process",4]
["indole-containing compound metabolic process",7]
["indoleacetic acid biosynthetic process",1]
["indoleacetic acid metabolic process",1]
["indolebutyric acid metabolic process",1]
["induced systemic resistance",5]
["induced systemic resistance- ethylene mediated signaling pathway",3]
["induced systemic resistance- jasmonic acid mediated signaling pathway",2]
["induction by symbiont of host defense response",2]
["induction by symbiont of host immune response",2]
["induction by symbiont of host innate immune response",2]
["inductive cell-cell signaling",1]
["inflammatory response",1]
["inflorescence development",2]
["innate immune response",38]
["innate immune response activating cell surface receptor signaling pathway",1]
["innate immune response-activating signal transduction",10]
["inner dynein arm assembly",3]
["inner ear development",2]
["inner ear morphogenesis",1]
["inner ear receptor cell development",1]
["inner ear receptor cell differentiation",1]
["inner ear receptor cell stereocilium organization",1]
["inner mitochondrial membrane organization",2]
["inner mitochondrial membrane protein complex",13]
["Ino80 complex",1]
["INO80-type complex",2]
["inorganic anion transmembrane transport",10]
["inorganic anion transmembrane transporter activity",15]
["inorganic anion transport",18]
["inorganic cation import across plasma membrane",1]
["inorganic cation transmembrane transport",83]
["inorganic cation transmembrane transporter activity",67]
["inorganic diphosphatase activity",1]
["inorganic ion homeostasis",32]
["inorganic ion import across plasma membrane",1]
["inorganic ion transmembrane transport",50]
["inorganic molecular entity transmembrane transporter activity",87]
["inorganic phosphate transmembrane transporter activity",5]
["inositol biosynthetic process",2]
["inositol bisphosphate phosphatase activity",1]
["inositol hexakisphosphate binding",2]
["inositol lipid-mediated signaling",1]
["inositol metabolic process",4]
["inositol monophosphate 1-phosphatase activity",2]
["inositol monophosphate phosphatase activity",3]
["inositol oxygenase activity",1]
["inositol phosphate biosynthetic process",4]
["inositol phosphate catabolic process",3]
["inositol phosphate dephosphorylation",3]
["inositol phosphate metabolic process",7]
["inositol phosphate phosphatase activity",6]
["inositol phosphate-mediated signaling",1]
["inositol tetrakisphosphate 1-kinase activity",1]
["inositol tetrakisphosphate 3-kinase activity",1]
["inositol tetrakisphosphate 6-kinase activity",1]
["inositol tetrakisphosphate kinase activity",2]
["inositol tetrakisphosphate phosphatase activity",1]
["inositol trisphosphate kinase activity",2]
["inositol trisphosphate phosphatase activity",1]
["inositol-1-3-4-5-tetrakisphosphate 3-phosphatase activity",1]
["inositol-1-3-4-trisphosphate 5-kinase activity",1]
["inositol-1-3-4-trisphosphate 6-kinase activity",2]
["inositol-1-4-5-trisphosphate 5-phosphatase activity",1]
["inositol-1-4-5-trisphosphate 6-kinase activity",1]
["inositol-3-phosphate synthase activity",1]
["instar larval or pupal development",2]
["instar larval or pupal morphogenesis",1]
["insulin receptor signaling pathway",1]
["integral component of chloroplast inner membrane",1]
["integral component of chloroplast outer membrane",5]
["integral component of cytoplasmic side of endoplasmic reticulum membrane",3]
["integral component of endoplasmic reticulum membrane",21]
["integral component of Golgi membrane",3]
["integral component of lumenal side of endoplasmic reticulum membrane",3]
["integral component of membrane",101]
["integral component of mitochondrial inner membrane",2]
["integral component of mitochondrial membrane",6]
["integral component of mitochondrial outer membrane",2]
["integral component of organelle membrane",19]
["integral component of peroxisomal membrane",4]
["integral component of plasma membrane",26]
["integral component of plastid inner membrane",1]
["integral component of plastid membrane",6]
["integral component of plastid outer membrane",5]
["intercalated disc",1]
["intercellular transport",2]
["intermediate filament cytoskeleton",1]
["intermembrane lipid transfer",2]
["intermembrane phospholipid transfer",1]
["internal peptidyl-lysine acetylation",8]
["internal protein amino acid acetylation",8]
["interstrand cross-link repair",5]
["intra-Golgi vesicle-mediated transport",4]
["intracellular anatomical structure",1779]
["intracellular cAMP-activated cation channel activity",1]
["intracellular cGMP-activated cation channel activity",1]
["intracellular cyclic nucleotide activated cation channel activity",2]
["intracellular immature spore",1]
["intracellular ligand-gated ion channel activity",2]
["intracellular lipid transport",1]
["intracellular membrane-bounded organelle",1471]
["intracellular mRNA localization",4]
["intracellular non-membrane-bounded organelle",284]
["intracellular organelle",1536]
["intracellular organelle lumen",302]
["intracellular pH reduction",4]
["intracellular protein transmembrane transport",19]
["intracellular protein transport",90]
["intracellular receptor signaling pathway",5]
["intracellular signal transduction",57]
["intracellular transport",121]
["intracellular vesicle",116]
["intraciliary transport",2]
["intraciliary transport involved in cilium assembly",1]
["intraciliary transport particle",2]
["intraciliary transport particle B",2]
["intralumenal vesicle formation",1]
["intramolecular lyase activity",1]
["intramolecular oxidoreductase activity",18]
["intramolecular oxidoreductase activity- interconverting aldoses and ketoses",2]
["intramolecular oxidoreductase activity- transposing C=C bonds",4]
["intramolecular oxidoreductase activity- transposing S-S bonds",9]
["intramolecular transferase activity",14]
["intramolecular transferase activity- phosphotransferases",3]
["intramolecular transferase activity- transferring amino groups",1]
["intramolecular transferase activity- transferring hydroxy groups",1]
["intrinsic component of chloroplast inner membrane",1]
["intrinsic component of chloroplast outer membrane",5]
["intrinsic component of endoplasmic reticulum membrane",22]
["intrinsic component of Golgi membrane",3]
["intrinsic component of membrane",111]
["intrinsic component of mitochondrial inner membrane",3]
["intrinsic component of mitochondrial membrane",7]
["intrinsic component of mitochondrial outer membrane",2]
["intrinsic component of organelle membrane",21]
["intrinsic component of peroxisomal membrane",4]
["intrinsic component of plasma membrane",32]
["intrinsic component of plastid inner membrane",1]
["intrinsic component of plastid membrane",6]
["intrinsic component of plastid outer membrane",5]
["intrinsic component of synaptic vesicle membrane",1]
["inward rectifier potassium channel activity",2]
["ion antiporter activity involved in regulation of postsynaptic membrane potential",1]
["ion binding",180]
["ion channel activity",15]
["ion channel binding",1]
["ion gated channel activity",9]
["ion homeostasis",37]
["ion transmembrane transport",110]
["ion transmembrane transporter activity",100]
["ion transport",122]
["IRES-dependent viral translational initiation",1]
["iron chaperone activity",1]
["iron coordination entity transport",1]
["iron import into the mitochondrion",1]
["iron incorporation into metallo-sulfur cluster",1]
["iron ion binding",7]
["iron ion homeostasis",9]
["iron ion transmembrane transport",3]
["iron ion transmembrane transporter activity",3]
["iron ion transport",4]
["iron-sulfur cluster assembly",6]
["iron-sulfur cluster binding",5]
["isoamylase activity",3]
["isoamylase complex",2]
["isocitrate dehydrogenase (NAD+) activity",1]
["isocitrate dehydrogenase activity",1]
["isocitrate lyase activity",1]
["isocitrate metabolic process",1]
["isoleucine biosynthetic process",2]
["isoleucine metabolic process",2]
["isomerase activity",63]
["isopentenyl diphosphate biosynthetic process",6]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",4]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process",1]
["isopentenyl diphosphate biosynthetic process- mevalonate pathway",1]
["isopentenyl diphosphate metabolic process",6]
["isoprenoid binding",2]
["isoprenoid biosynthetic process",29]
["isoprenoid catabolic process",2]
["isoprenoid metabolic process",36]
["isoprenoid transport",1]
["isovaleryl-CoA dehydrogenase activity",1]
["isovaleryl-CoA(4-) catabolic process",1]
["isovaleryl-CoA(4-) metabolic process",1]
["ISWI-type complex",1]
["jasmonic acid and ethylene-dependent systemic resistance",4]
["jasmonic acid and ethylene-dependent systemic resistance- ethylene mediated signaling pathway",1]
["jasmonic acid and ethylene-dependent systemic resistance- jasmonic acid mediated signaling pathway",2]
["jasmonic acid biosynthetic process",4]
["jasmonic acid mediated signaling pathway",10]
["jasmonic acid metabolic process",4]
["K48-linked polyubiquitin modification-dependent protein binding",1]
["K63-linked polyubiquitin modification-dependent protein binding",1]
["karyogamy",3]
["ketone biosynthetic process",4]
["ketone catabolic process",3]
["kidney development",1]
["kinase activator activity",2]
["kinase activity",117]
["kinase binding",13]
["kinase regulator activity",7]
["kinesin binding",3]
["kinesin complex",10]
["kinetochore",17]
["kinetochore assembly",3]
["kinetochore binding",4]
["kinetochore microtubule",4]
["kinetochore organization",3]
["kinocilium",1]
["Krueppel-associated box domain binding",1]
["kynurenine aminotransferase activity",1]
["kynurenine metabolic process",1]
["kynurenine-oxoglutarate transaminase activity",1]
["L-alanine catabolic process",1]
["L-alanine catabolic process- by transamination",1]
["L-alanine metabolic process",1]
["L-alanine:2-oxoglutarate aminotransferase activity",2]
["L-alpha-amino acid transmembrane transport",6]
["L-amino acid transmembrane transporter activity",6]
["L-amino acid transport",6]
["L-arginine transmembrane transport",1]
["L-arginine transport",1]
["L-ascorbate peroxidase activity",1]
["L-ascorbic acid biosynthetic process",2]
["L-ascorbic acid metabolic process",2]
["L-ascorbic acid transmembrane transport",1]
["L-ascorbic acid transmembrane transporter activity",1]
["L-aspartate:2-oxoglutarate aminotransferase activity",3]
["L-cysteine desulfhydrase activity",1]
["L-cystine transmembrane transporter activity",1]
["L-cystine transport",1]
["L-fucose catabolic process",1]
["L-fucose metabolic process",1]
["L-galactose dehydrogenase activity",1]
["L-galactose-1-phosphate phosphatase activity",1]
["L-glutamate transmembrane transport",1]
["L-glutamate transmembrane transporter activity",1]
["L-glutamine aminotransferase activity",1]
["L-glutamine:pyruvate aminotransferase activity",1]
["L-gulono-1-4-lactone dehydrogenase activity",1]
["L-histidine transmembrane transport",1]
["L-histidine transmembrane transporter activity",1]
["L-kynurenine metabolic process",1]
["L-L-diaminopimelate aminotransferase activity",1]
["L-lysine transmembrane transport",1]
["L-lysine transmembrane transporter activity",1]
["L-lysine transport",1]
["L-malate dehydrogenase activity",3]
["L-methionine biosynthetic process",2]
["L-methionine biosynthetic process from L-homoserine via cystathionine",1]
["L-methionine salvage",1]
["L-methionine salvage from methylthioadenosine",1]
["L-ornithine transmembrane transport",1]
["L-ornithine transmembrane transporter activity",1]
["L-phenylalanine aminotransferase activity",1]
["L-phenylalanine biosynthetic process",2]
["L-phenylalanine catabolic process",1]
["L-phenylalanine metabolic process",4]
["L-phenylalanine:pyruvate aminotransferase activity",1]
["L-serine ammonia-lyase activity",1]
["L-serine biosynthetic process",2]
["L-serine metabolic process",3]
["L-serine transmembrane transporter activity",1]
["L-serine transport",1]
["L-threonine ammonia-lyase activity",1]
["L-tryptophan aminotransferase activity",1]
["L-tryptophan:2-oxoglutarate aminotransferase activity",1]
["L-tryptophan:pyruvate aminotransferase activity",1]
["lactate biosynthetic process",1]
["lactate dehydrogenase activity",2]
["lactate metabolic process",3]
["lactate oxidation",1]
["lactone biosynthetic process",3]
["lactone metabolic process",3]
["lactoylglutathione lyase activity",1]
["lagging strand elongation",2]
["lamellar body",1]
["large ribosomal subunit",8]
["larval central nervous system remodeling",1]
["larval development",3]
["late endosome",19]
["late endosome membrane",8]
["late endosome to lysosome transport",1]
["late endosome to vacuole transport",9]
["late endosome to vacuole transport via multivesicular body sorting pathway",3]
["late nucleophagy",2]
["lateral attachment of mitotic spindle microtubules to kinetochore",3]
["lateral root branching",1]
["lateral root development",21]
["lateral root formation",11]
["lateral root morphogenesis",12]
["leading edge membrane",1]
["leaf development",47]
["leaf formation",1]
["leaf morphogenesis",12]
["leaf senescence",17]
["leaf shaping",1]
["leaf vascular tissue pattern formation",7]
["leak channel activity",1]
["learning",3]
["learning or memory",3]
["left/right pattern formation",1]
["leucine biosynthetic process",2]
["leucine catabolic process",3]
["leucine metabolic process",5]
["leucine-tRNA ligase activity",2]
["leucoplast",1]
["leucyl-tRNA aminoacylation",2]
["leukocyte activation",4]
["leukocyte activation involved in immune response",4]
["leukocyte chemotaxis",1]
["leukocyte degranulation",3]
["leukocyte mediated immunity",3]
["leukocyte migration",1]
["Lewis a epitope biosynthetic process",1]
["ligand-gated cation channel activity",3]
["ligand-gated channel activity",4]
["ligand-gated ion channel activity",4]
["ligase activity",40]
["ligase activity- forming carbon-carbon bonds",2]
["ligase activity- forming carbon-nitrogen bonds",9]
["ligase activity- forming carbon-oxygen bonds",16]
["ligase activity- forming carbon-sulfur bonds",10]
["ligase activity- forming nitrogen-metal bonds",2]
["ligase activity- forming nitrogen-metal bonds- forming coordination complexes",2]
["ligase activity- forming phosphoric ester bonds",1]
["light-harvesting complex",1]
["lignin biosynthetic process",3]
["lignin metabolic process",4]
["limb development",3]
["limb morphogenesis",2]
["limbic system development",2]
["limit dextrinase activity",1]
["linoleate 13S-lipoxygenase activity",1]
["linoleic acid metabolic process",1]
["lipase activator activity",1]
["lipase activity",15]
["lipid binding",25]
["lipid biosynthetic process",95]
["lipid catabolic process",27]
["lipid droplet",5]
["lipid droplet organization",1]
["lipid glycosylation",1]
["lipid homeostasis",7]
["lipid kinase activity",1]
["lipid localization",18]
["lipid metabolic process",150]
["lipid modification",22]
["lipid oxidation",17]
["lipid phosphorylation",3]
["lipid storage",2]
["lipid transfer activity",1]
["lipid translocation",2]
["lipid transport",16]
["lipid transporter activity",9]
["lipid X metabolic process",1]
["lipoate biosynthetic process",2]
["lipoate metabolic process",2]
["lipoate synthase activity",2]
["lipophagy",1]
["lipopolysaccharide binding",1]
["lipopolysaccharide biosynthetic process",1]
["lipopolysaccharide metabolic process",1]
["lipoprotein biosynthetic process",10]
["lipoprotein catabolic process",1]
["lipoprotein metabolic process",11]
["liposaccharide metabolic process",17]
["lipoyl(octanoyl) transferase activity",1]
["liver development",2]
["localization",371]
["localization of cell",10]
["localization within membrane",2]
["locomotion",20]
["locomotory behavior",2]
["locomotory exploration behavior",1]
["long-chain fatty acid biosynthetic process",1]
["long-chain fatty acid import into cell",1]
["long-chain fatty acid metabolic process",8]
["long-chain fatty acid transport",2]
["long-chain fatty acid-CoA ligase activity",3]
["long-chain fatty-acyl-CoA metabolic process",1]
["long-chain-enoyl-CoA hydratase activity",1]
["long-day photoperiodism",4]
["long-day photoperiodism- flowering",2]
["long-distance posttranscriptional gene silencing",1]
["long-term synaptic potentiation",1]
["longitudinal axis specification",2]
["low-affinity phosphate transmembrane transporter activity",1]
["Lsm1-7-Pat1 complex",1]
["lumenal side of endoplasmic reticulum membrane",3]
["lung development",3]
["lung vasculature development",1]
["lyase activity",39]
["lycopene beta cyclase activity",2]
["lycopene biosynthetic process",1]
["lycopene epsilon cyclase activity",1]
["lycopene metabolic process",1]
["lysine biosynthetic process",1]
["lysine biosynthetic process via aminoadipic acid",1]
["lysine metabolic process",1]
["lysine N-methyltransferase activity",8]
["lysine-acetylated histone binding",2]
["lysine-tRNA ligase activity",1]
["lysophosphatidic acid acyltransferase activity",1]
["lysophosphatidic acid phosphatase activity",1]
["lysophosphatidylethanolamine acyltransferase activity",1]
["lysophospholipase activity",1]
["lysophospholipid acyltransferase activity",3]
["lysosomal lumen",1]
["lysosomal membrane",12]
["lysosomal microautophagy",2]
["lysosomal transport",12]
["lysosome",21]
["lysosome organization",6]
["lytic vacuole",25]
["lytic vacuole membrane",13]
["lytic vacuole organization",7]
["lytic vacuole within protein storage vacuole",1]
["m7G(5')pppN diphosphatase activity",1]
["macroautophagy",17]
["macrolide binding",6]
["macromolecule biosynthetic process",213]
["macromolecule catabolic process",132]
["macromolecule deacylation",4]
["macromolecule depalmitoylation",1]
["macromolecule glycosylation",34]
["macromolecule localization",143]
["macromolecule metabolic process",781]
["macromolecule methylation",43]
["macromolecule modification",352]
["macromolecule transmembrane transporter activity",6]
["macropinosome",1]
["magnesium chelatase activity",2]
["magnesium chelatase complex",3]
["magnesium ion binding",16]
["magnesium ion homeostasis",1]
["magnesium ion transmembrane transport",4]
["magnesium ion transmembrane transporter activity",4]
["magnesium ion transport",5]
["magnesium protoporphyrin IX methyltransferase activity",1]
["magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity",1]
["maintenance of cell number",13]
["maintenance of DNA methylation",2]
["maintenance of DNA repeat elements",2]
["maintenance of dormancy",2]
["maintenance of floral organ identity",1]
["maintenance of inflorescence meristem identity",1]
["maintenance of location",5]
["maintenance of location in cell",3]
["maintenance of meristem identity",9]
["maintenance of mitotic sister chromatid cohesion",1]
["maintenance of plant organ identity",1]
["maintenance of protein localization in endoplasmic reticulum",1]
["maintenance of protein localization in organelle",3]
["maintenance of protein location",3]
["maintenance of protein location in cell",3]
["maintenance of protein location in nucleus",2]
["maintenance of rDNA",1]
["maintenance of root meristem identity",5]
["maintenance of seed dormancy",2]
["maintenance of shoot apical meristem identity",5]
["maintenance of sister chromatid cohesion",1]
["malate dehydrogenase (decarboxylating) (NAD+) activity",1]
["malate dehydrogenase activity",4]
["malate metabolic process",3]
["malate synthase activity",1]
["malate transmembrane transport",4]
["malate transmembrane transporter activity",4]
["malate transport",4]
["male gamete generation",17]
["male meiosis chromosome segregation",1]
["male meiosis cytokinesis",5]
["male meiotic nuclear division",10]
["male-female gamete recognition during double fertilization forming a zygote and endosperm",1]
["maleylacetoacetate isomerase activity",1]
["malic enzyme activity",1]
["maltoheptaose binding",1]
["maltose catabolic process",1]
["maltose metabolic process",2]
["maltose transmembrane transporter activity",1]
["maltose transport",1]
["mandelonitrile lyase activity",1]
["manganese ion binding",7]
["manganese ion transmembrane transport",5]
["manganese ion transmembrane transporter activity",5]
["manganese ion transport",5]
["mannan catabolic process",1]
["mannan endo-1-4-beta-mannosidase activity",1]
["mannan metabolic process",2]
["mannan synthase activity",2]
["mannose metabolic process",1]
["mannosidase activity",6]
["mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity",1]
["mannosyl-oligosaccharide 1-2-alpha-mannosidase activity",4]
["mannosyl-oligosaccharide 1-3-1-6-alpha-mannosidase activity",1]
["mannosyl-oligosaccharide mannosidase activity",5]
["mannosylation",6]
["mannosyltransferase activity",6]
["MAP kinase activity",4]
["MAP kinase kinase activity",2]
["MAP kinase kinase kinase activity",2]
["MAP kinase phosphatase activity",3]
["MAP kinase serine/threonine phosphatase activity",2]
["MAP kinase tyrosine phosphatase activity",1]
["MAPK cascade",7]
["mating",1]
["mating behavior",1]
["mating projection",3]
["mating projection tip",3]
["maturation of 5.8S rRNA",14]
["maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",10]
["maturation of LSU-rRNA",13]
["maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",8]
["maturation of SSU-rRNA",14]
["maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",10]
["mature ribosome assembly",1]
["MCM complex",3]
["Mcs4 RR-MAPKKK complex",1]
["mechanoreceptor differentiation",1]
["mechanosensitive ion channel activity",2]
["mediator complex",12]
["medium-chain fatty acid metabolic process",1]
["medium-chain fatty acid-CoA ligase activity",1]
["megagametogenesis",7]
["meiosis I",21]
["meiosis I cell cycle process",23]
["meiosis II",2]
["meiosis II cell cycle process",2]
["meiotic cell cycle",36]
["meiotic cell cycle checkpoint signaling",2]
["meiotic cell cycle process",34]
["meiotic chromosome segregation",14]
["meiotic chromosome separation",6]
["meiotic cytokinesis",5]
["meiotic DNA double-strand break formation",1]
["meiotic DNA double-strand break processing",1]
["meiotic DNA recombinase assembly",1]
["meiotic gene conversion",3]
["meiotic mismatch repair",1]
["meiotic nuclear division",29]
["meiotic recombination checkpoint signaling",1]
["meiotic sister chromatid cohesion",1]
["meiotic sister chromatid cohesion- centromeric",1]
["meiotic sister chromatid segregation",1]
["meiotic spindle assembly checkpoint signaling",1]
["meiotic spindle checkpoint signaling",1]
["meiotic spindle organization",1]
["meiotic spindle pole body",1]
["melibiose catabolic process",1]
["melibiose metabolic process",1]
["membrane",834]
["membrane coat",8]
["membrane depolarization",1]
["membrane depolarization during action potential",1]
["membrane docking",7]
["membrane fission",2]
["membrane fusion",15]
["membrane invagination",1]
["membrane lipid biosynthetic process",23]
["membrane lipid catabolic process",4]
["membrane lipid metabolic process",30]
["membrane organization",46]
["membrane protein complex",77]
["membrane protein intracellular domain proteolysis",1]
["membrane protein proteolysis",2]
["membrane protein proteolysis involved in retrograde protein transport- ER to cytosol",1]
["membrane-bounded organelle",1500]
["membrane-enclosed lumen",302]
["memory",3]
["meristem determinacy",1]
["meristem development",39]
["meristem growth",2]
["meristem initiation",7]
["meristem maintenance",26]
["meristem structural organization",9]
["mesoderm development",2]
["mesoderm formation",1]
["mesoderm morphogenesis",1]
["messenger ribonucleoprotein complex assembly",1]
["metabolic process",1267]
["metal cluster binding",5]
["metal incorporation into metallo-molybdopterin complex",1]
["metal incorporation into metallo-sulfur cluster",1]
["metal ion binding",90]
["metal ion homeostasis",22]
["metal ion transmembrane transporter activity",29]
["metal ion transport",52]
["metal ion:proton antiporter activity",1]
["metallo-sulfur cluster assembly",6]
["metalloaminopeptidase activity",2]
["metallochaperone activity",1]
["metalloendopeptidase activity",6]
["metalloexopeptidase activity",2]
["metallopeptidase activity",15]
["metamorphosis",1]
["metaphase plate congression",10]
["metaxylem development",1]
["methenyltetrahydrofolate cyclohydrolase activity",1]
["methionine biosynthetic process",4]
["methionine metabolic process",5]
["methionine synthase activity",1]
["methionine-oxo-acid transaminase activity",1]
["methionine-tRNA ligase activity",1]
["methionyl-tRNA aminoacylation",1]
["methotrexate transmembrane transporter activity",1]
["methotrexate transport",1]
["methyl-CpG binding",1]
["methylated histone binding",4]
["methylation",62]
["methylation-dependent protein binding",4]
["methylcrotonoyl-CoA carboxylase activity",1]
["methylcytosine dioxygenase activity",1]
["methylenetetrahydrofolate dehydrogenase (NADP+) activity",1]
["methylenetetrahydrofolate reductase (NAD(P)H) activity",1]
["methylglyoxal catabolic process",3]
["methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione",1]
["methylglyoxal catabolic process to lactate",2]
["methylglyoxal metabolic process",3]
["methylthioadenosine nucleosidase activity",1]
["methylthiotransferase activity",1]
["methyltransferase activity",48]
["methyltransferase complex",10]
["MHC class I protein binding",1]
["MHC class II protein binding",1]
["MHC protein binding",2]
["microbody",47]
["microbody membrane",10]
["microgametogenesis",6]
["microsporogenesis",2]
["microtubule",17]
["microtubule associated complex",11]
["microtubule binding",17]
["microtubule bundle formation",8]
["microtubule cytoskeleton",41]
["microtubule cytoskeleton organization",39]
["microtubule cytoskeleton organization involved in mitosis",14]
["microtubule depolymerization",2]
["microtubule end",1]
["microtubule minus-end binding",1]
["microtubule motor activity",10]
["microtubule nucleation",2]
["microtubule nucleation by interphase microtubule organizing center",1]
["microtubule nucleation by microtubule organizing center",1]
["microtubule organizing center",11]
["microtubule organizing center organization",5]
["microtubule plus-end",1]
["microtubule plus-end binding",1]
["microtubule plus-end directed mitotic chromosome migration",3]
["microtubule polymerization",2]
["microtubule polymerization or depolymerization",4]
["microtubule severing",2]
["microtubule-based movement",20]
["microtubule-based process",45]
["microtubule-based transport",5]
["microtubule-severing ATPase activity",2]
["midbody",5]
["minus-end kinesin complex",1]
["miRNA catabolic process",3]
["miRNA export from nucleus",1]
["miRNA loading onto RISC involved in gene silencing by miRNA",2]
["miRNA metabolic process",3]
["miRNA transport",2]
["mismatch repair",7]
["mismatch repair complex",3]
["mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication",1]
["mismatched DNA binding",3]
["mitochondria-nucleus signaling pathway",2]
["mitochondrial ADP transmembrane transport",1]
["mitochondrial alpha-ketoglutarate dehydrogenase complex",2]
["mitochondrial ATP synthesis coupled electron transport",3]
["mitochondrial ATP transmembrane transport",1]
["mitochondrial cytochrome c oxidase assembly",1]
["mitochondrial degradosome",1]
["mitochondrial DNA metabolic process",1]
["mitochondrial DNA replication",1]
["mitochondrial DNA-directed RNA polymerase complex",2]
["mitochondrial electron transfer flavoprotein complex",1]
["mitochondrial electron transport- NADH to ubiquinone",2]
["mitochondrial electron transport- succinate to ubiquinone",1]
["mitochondrial envelope",50]
["mitochondrial fission",5]
["mitochondrial gene expression",9]
["mitochondrial genome maintenance",2]
["mitochondrial glycyl-tRNA aminoacylation",1]
["mitochondrial inner membrane",39]
["mitochondrial intermembrane space",1]
["mitochondrial L-ornithine transmembrane transport",1]
["mitochondrial large ribosomal subunit",1]
["mitochondrial matrix",28]
["mitochondrial membrane",48]
["mitochondrial membrane organization",5]
["mitochondrial mRNA catabolic process",1]
["mitochondrial mRNA surveillance",1]
["mitochondrial ncRNA surveillance",1]
["mitochondrial nucleoid",2]
["mitochondrial outer membrane",8]
["mitochondrial outer membrane permeabilization",1]
["mitochondrial outer membrane permeabilization involved in programmed cell death",1]
["mitochondrial outer membrane translocase complex",1]
["mitochondrial protein catabolic process",1]
["mitochondrial protein-containing complex",22]
["mitochondrial proton-transporting ATP synthase complex",1]
["mitochondrial proton-transporting ATP synthase complex assembly",1]
["mitochondrial respirasome",8]
["mitochondrial respiratory chain complex assembly",1]
["mitochondrial respiratory chain complex I",6]
["mitochondrial respiratory chain complex II- succinate dehydrogenase complex (ubiquinone)",1]
["mitochondrial respiratory chain complex III",1]
["mitochondrial ribosome",2]
["mitochondrial RNA 3'-end processing",1]
["mitochondrial RNA catabolic process",2]
["mitochondrial RNA metabolic process",6]
["mitochondrial RNA modification",1]
["mitochondrial RNA processing",3]
["mitochondrial RNA surveillance",1]
["mitochondrial small ribosomal subunit",1]
["mitochondrial transcription",2]
["mitochondrial translation",4]
["mitochondrial translational elongation",2]
["mitochondrial translational termination",1]
["mitochondrial transmembrane transport",9]
["mitochondrial transport",23]
["mitochondrial tricarboxylic acid cycle enzyme complex",2]
["mitochondrial tRNA modification",1]
["mitochondrial tRNA processing",1]
["mitochondrial tRNA pseudouridine synthesis",1]
["mitochondrion",213]
["mitochondrion disassembly",7]
["mitochondrion localization",3]
["mitochondrion morphogenesis",1]
["mitochondrion organization",35]
["mitochondrion targeting sequence binding",1]
["mitochondrion transport along microtubule",3]
["mitophagy",1]
["mitotic cell cycle",52]
["mitotic cell cycle checkpoint signaling",13]
["mitotic cell cycle phase transition",9]
["mitotic cell cycle process",48]
["mitotic centrosome separation",1]
["mitotic chromosome condensation",2]
["mitotic chromosome movement towards spindle pole",4]
["mitotic cytokinesis",16]
["mitotic cytokinetic process",10]
["mitotic DNA damage checkpoint signaling",6]
["mitotic DNA integrity checkpoint signaling",7]
["mitotic DNA replication",2]
["mitotic DNA replication checkpoint signaling",1]
["mitotic DNA replication initiation",1]
["mitotic DNA replication preinitiation complex assembly",1]
["mitotic G1 DNA damage checkpoint signaling",6]
["mitotic G1/S transition checkpoint signaling",2]
["mitotic G2 DNA damage checkpoint signaling",4]
["mitotic G2/M transition checkpoint",3]
["mitotic intra-S DNA damage checkpoint signaling",3]
["mitotic metaphase plate congression",9]
["mitotic nuclear division",20]
["mitotic recombination",8]
["mitotic sister chromatid cohesion",1]
["mitotic sister chromatid segregation",14]
["mitotic sister chromatid separation",1]
["mitotic spindle",6]
["mitotic spindle assembly",3]
["mitotic spindle assembly checkpoint signaling",5]
["mitotic spindle checkpoint signaling",5]
["mitotic spindle disassembly",2]
["mitotic spindle midzone",3]
["mitotic spindle organization",14]
["mitotic spindle pole",1]
["mitotic spindle pole body",1]
["MLL1 complex",2]
["MLL1/2 complex",2]
["MLL3/4 complex",2]
["Mo-molybdopterin cofactor biosynthetic process",1]
["Mo-molybdopterin cofactor metabolic process",1]
["Mo-molybdopterin cofactor sulfurase activity",1]
["modification by symbiont of host cellular component",1]
["modification by symbiont of host structure",1]
["modification of cellular component in other organism involved in symbiotic interaction",1]
["modification of structure of other organism involved in symbiotic interaction",1]
["modification-dependent macromolecule catabolic process",58]
["modification-dependent protein binding",10]
["modification-dependent protein catabolic process",51]
["modified amino acid binding",1]
["modified amino acid transmembrane transporter activity",2]
["modified amino acid transport",4]
["modulation by host of symbiont process",2]
["modulation by host of viral genome replication",1]
["modulation by host of viral process",2]
["modulation by symbiont of host cellular process",1]
["modulation by symbiont of host defense response",6]
["modulation by symbiont of host immune response",6]
["modulation by symbiont of host innate immune response",6]
["modulation by symbiont of host process",6]
["modulation by virus of host process",1]
["modulation of chemical synaptic transmission",3]
["modulation of process of other organism",9]
["modulation of process of other organism involved in symbiotic interaction",8]
["molecular adaptor activity",8]
["molecular carrier activity",6]
["molecular function regulator",54]
["molecular transducer activity",30]
["molecular_function",1540]
["molting cycle",2]
["molting cycle process",2]
["molybdate ion export from vacuole",1]
["molybdate ion transmembrane transporter activity",1]
["molybdate ion transport",1]
["molybdenum incorporation into molybdenum-molybdopterin complex",1]
["molybdenum ion binding",1]
["molybdopterin adenylyltransferase activity",1]
["molybdopterin cofactor biosynthetic process",1]
["molybdopterin cofactor metabolic process",2]
["molybdopterin molybdotransferase activity",1]
["monocarboxylic acid binding",5]
["monocarboxylic acid biosynthetic process",37]
["monocarboxylic acid catabolic process",18]
["monocarboxylic acid metabolic process",80]
["monocarboxylic acid transmembrane transporter activity",5]
["monocarboxylic acid transport",7]
["monodehydroascorbate reductase (NADH) activity",2]
["monolayer-surrounded lipid storage body",1]
["monooxygenase activity",17]
["monopolar cell growth",1]
["monopolar spindle attachment to meiosis I kinetochore",2]
["monosaccharide binding",2]
["monosaccharide biosynthetic process",10]
["monosaccharide catabolic process",6]
["monosaccharide metabolic process",24]
["monosaccharide transmembrane transport",7]
["monosaccharide transmembrane transporter activity",7]
["monovalent cation:proton antiporter activity",2]
["monovalent inorganic anion homeostasis",2]
["monovalent inorganic cation homeostasis",9]
["morphogenesis of a branching structure",7]
["morphogenesis of a polarized epithelium",1]
["morphogenesis of an epithelium",5]
["morphogenesis of embryonic epithelium",1]
["motile cilium",3]
["motile cilium assembly",1]
["motor activity",10]
["movement in host",1]
["movement in host environment",2]
["movement of cell or subcellular component",29]
["Mre11 complex",1]
["mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity",4]
["mRNA (adenine-N1-)-methyltransferase activity",1]
["mRNA 3'-end processing",14]
["mRNA 3'-splice site recognition",1]
["mRNA 3'-UTR AU-rich region binding",6]
["mRNA 3'-UTR binding",2]
["mRNA 5'-splice site recognition",1]
["mRNA alternative polyadenylation",1]
["mRNA binding",42]
["mRNA cap binding complex",3]
["mRNA catabolic process",27]
["mRNA cis splicing- via spliceosome",2]
["mRNA cleavage",8]
["mRNA cleavage and polyadenylation specificity factor complex",4]
["mRNA cleavage factor complex",8]
["mRNA cleavage involved in mRNA processing",2]
["mRNA destabilization",1]
["mRNA editing complex",2]
["mRNA export from nucleus",13]
["mRNA guanylyltransferase activity",1]
["mRNA metabolic process",84]
["mRNA methylation",6]
["mRNA methyltransferase activity",5]
["mRNA modification",9]
["mRNA polyadenylation",11]
["mRNA processing",50]
["mRNA pseudouridine synthesis",3]
["mRNA splice site selection",2]
["mRNA splicing- via spliceosome",33]
["mRNA stabilization",2]
["mRNA transcription",1]
["mRNA transport",13]
["mRNA-containing ribonucleoprotein complex export from nucleus",13]
["mucilage biosynthetic process",7]
["mucilage biosynthetic process involved in seed coat development",6]
["mucilage extrusion from seed coat",1]
["mucilage metabolic process",7]
["mucilage metabolic process involved in seed coat development",6]
["multi-eIF complex",1]
["multi-multicellular organism process",31]
["multi-organism carbohydrate catabolic process",1]
["multi-organism carbohydrate metabolic process",1]
["multi-organism catabolic process",1]
["multi-organism cellular localization",1]
["multi-organism cellular process",6]
["multi-organism intercellular transport",1]
["multi-organism localization",2]
["multi-organism metabolic process",1]
["multi-organism process",196]
["multi-organism reproductive process",33]
["multi-organism transport",2]
["multicellular organism development",372]
["multicellular organism reproduction",33]
["multicellular organismal homeostasis",3]
["multicellular organismal movement",1]
["multicellular organismal process",409]
["multicellular organismal reproductive process",31]
["multicellular organismal signaling",1]
["multicellular organismal water homeostasis",1]
["multidimensional cell growth",9]
["multimeric ribonuclease P complex",1]
["multivesicular body",4]
["multivesicular body membrane",1]
["multivesicular body sorting pathway",6]
["muscle cell development",1]
["muscle cell differentiation",2]
["muscle structure development",3]
["muscle tissue development",2]
["MutLalpha complex",1]
["MutSalpha complex",1]
["MutSbeta complex",1]
["mycotoxin biosynthetic process",1]
["mycotoxin metabolic process",1]
["myelin sheath",1]
["myelination",1]
["myeloid cell activation involved in immune response",4]
["myeloid leukocyte activation",4]
["myeloid leukocyte mediated immunity",3]
["myo-inositol hexakisphosphate biosynthetic process",4]
["myo-inositol hexakisphosphate metabolic process",4]
["myo-inositol transmembrane transporter activity",1]
["myo-inositol transport",1]
["myo-inositol:proton symporter activity",1]
["myoblast differentiation",1]
["myofibril",1]
["myosin binding",2]
["myosin heavy chain binding",1]
["myosin tail binding",1]
["myosin XI tail binding",1]
["myristoyltransferase activity",1]
["N-(long-chain-acyl)ethanolamine deacylase activity",1]
["N-acetyltransferase activity",7]
["N-acylethanolamine metabolic process",1]
["N-acylsphingosine amidohydrolase activity",1]
["N-acyltransferase activity",9]
["N-carbamoylputrescine amidase activity",1]
["N-glycan processing",8]
["N-methyltransferase activity",19]
["N-terminal peptidyl-glycine N-myristoylation",1]
["N-terminal protein amino acid modification",3]
["N-terminal protein lipidation",1]
["N-terminal protein myristoylation",1]
["N6-methyladenosine-containing RNA binding",1]
["N6-threonylcarbomyladenosine methylthiotransferase activity",1]
["NAD binding",6]
["NAD biosynthesis via nicotinamide riboside salvage pathway",1]
["NAD biosynthetic process",5]
["NAD metabolic process",9]
["NAD transmembrane transport",1]
["NAD transmembrane transporter activity",1]
["NAD transport",1]
["NAD(P)+ transhydrogenase activity",2]
["NAD(P)H dehydrogenase (quinone) activity",1]
["NAD(P)H dehydrogenase complex (plastoquinone)",2]
["NAD+ binding",1]
["NADH dehydrogenase (quinone) activity",1]
["NADH dehydrogenase (ubiquinone) activity",1]
["NADH dehydrogenase activity",4]
["NADH dehydrogenase complex",6]
["NADH dehydrogenase complex (plastoquinone) assembly",1]
["NADH dehydrogenase complex assembly",1]
["NADH metabolic process",6]
["NADH oxidation",1]
["NADH regeneration",1]
["NADHX epimerase activity",2]
["NADP binding",5]
["NADP metabolic process",7]
["NADPH binding",3]
["NADPH dehydrogenase activity",2]
["NADPH regeneration",1]
["NADPH-hemoprotein reductase activity",1]
["NADPH:quinone reductase activity",1]
["NADPHX epimerase activity",2]
["narrow pore channel activity",1]
["nBAF complex",1]
["ncRNA 3'-end processing",9]
["ncRNA 5'-end processing",3]
["ncRNA catabolic process",11]
["ncRNA export from nucleus",3]
["ncRNA metabolic process",105]
["ncRNA polyadenylation",2]
["ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process",1]
["ncRNA processing",84]
["Ndc80 complex",2]
["NEDD8 activating enzyme activity",2]
["NEDD8-specific protease activity",1]
["negative chemotaxis",2]
["negative gravitropism",1]
["negative regulation of abscisic acid-activated signaling pathway",8]
["negative regulation of actin filament depolymerization",1]
["negative regulation of actin filament polymerization",2]
["negative regulation of activin receptor signaling pathway",1]
["negative regulation of anthocyanin metabolic process",2]
["negative regulation of antisense RNA transcription",1]
["negative regulation of apoptotic process",9]
["negative regulation of apoptotic signaling pathway",2]
["negative regulation of asexual reproduction",1]
["negative regulation of ATP biosynthetic process",1]
["negative regulation of ATP metabolic process",1]
["negative regulation of autophagy",1]
["negative regulation of auxin mediated signaling pathway",2]
["negative regulation of auxin metabolic process",1]
["negative regulation of binding",2]
["negative regulation of biological process",205]
["negative regulation of biosynthetic process",53]
["negative regulation of BMP signaling pathway",1]
["negative regulation of bone development",1]
["negative regulation of brassinosteroid mediated signaling pathway",3]
["negative regulation of canonical Wnt signaling pathway",4]
["negative regulation of carbohydrate metabolic process",1]
["negative regulation of cardiac muscle cell apoptotic process",1]
["negative regulation of cardiac muscle cell proliferation",1]
["negative regulation of cardiac muscle tissue development",1]
["negative regulation of cardiac muscle tissue growth",1]
["negative regulation of catabolic process",8]
["negative regulation of catalytic activity",17]
["negative regulation of cation transmembrane transport",1]
["negative regulation of cell activation",1]
["negative regulation of cell communication",41]
["negative regulation of cell cycle",25]
["negative regulation of cell cycle G1/S phase transition",2]
["negative regulation of cell cycle G2/M phase transition",4]
["negative regulation of cell cycle phase transition",10]
["negative regulation of cell cycle process",20]
["negative regulation of cell death",15]
["negative regulation of cell development",2]
["negative regulation of cell differentiation",3]
["negative regulation of cell division",2]
["negative regulation of cell growth",2]
["negative regulation of cell population proliferation",8]
["negative regulation of cell projection organization",1]
["negative regulation of cell septum assembly",1]
["negative regulation of cell size",1]
["negative regulation of cellular amide metabolic process",6]
["negative regulation of cellular amine metabolic process",3]
["negative regulation of cellular amino acid metabolic process",3]
["negative regulation of cellular biosynthetic process",52]
["negative regulation of cellular carbohydrate metabolic process",1]
["negative regulation of cellular catabolic process",7]
["negative regulation of cellular component organization",25]
["negative regulation of cellular macromolecule biosynthetic process",44]
["negative regulation of cellular metabolic process",78]
["negative regulation of cellular process",148]
["negative regulation of cellular protein catabolic process",2]
["negative regulation of cellular protein metabolic process",23]
["negative regulation of cellular response to alcohol",8]
["negative regulation of cellular response to growth factor stimulus",1]
["negative regulation of cellular response to insulin stimulus",1]
["negative regulation of cellular response to transforming growth factor beta stimulus",1]
["negative regulation of chlorophyll biosynthetic process",1]
["negative regulation of chromatin organization",6]
["negative regulation of chromatin silencing",4]
["negative regulation of chromatin silencing at telomere",1]
["negative regulation of chromosome organization",14]
["negative regulation of chromosome segregation",4]
["negative regulation of chromosome separation",4]
["negative regulation of cysteine-type endopeptidase activity",1]
["negative regulation of cytokine production",2]
["negative regulation of cytokinesis",1]
["negative regulation of cytokinin dehydrogenase activity",1]
["negative regulation of cytoskeleton organization",2]
["negative regulation of defense response",15]
["negative regulation of defense response to bacterium",4]
["negative regulation of dendrite development",1]
["negative regulation of dendritic spine development",1]
["negative regulation of dephosphorylation",4]
["negative regulation of developmental growth",2]
["negative regulation of developmental process",21]
["negative regulation of division septum assembly",1]
["negative regulation of DNA binding",2]
["negative regulation of DNA biosynthetic process",4]
["negative regulation of DNA endoreduplication",5]
["negative regulation of DNA metabolic process",17]
["negative regulation of DNA recombination",4]
["negative regulation of DNA repair",1]
["negative regulation of DNA replication",9]
["negative regulation of DNA-binding transcription factor activity",1]
["negative regulation of DNA-dependent DNA replication",9]
["negative regulation of DNA-dependent DNA replication initiation",1]
["negative regulation of DNA-templated transcription- termination",1]
["negative regulation of double-strand break repair",1]
["negative regulation of double-strand break repair via single-strand annealing",1]
["negative regulation of embryonic development",1]
["negative regulation of endopeptidase activity",2]
["negative regulation of endoplasmic reticulum unfolded protein response",1]
["negative regulation of endosome organization",1]
["negative regulation of epidermal growth factor receptor signaling pathway",1]
["negative regulation of epithelial cell proliferation",1]
["negative regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["negative regulation of ERAD pathway",2]
["negative regulation of ERBB signaling pathway",1]
["negative regulation of ERK1 and ERK2 cascade",2]
["negative regulation of establishment of protein localization",1]
["negative regulation of ethylene biosynthetic process",3]
["negative regulation of ethylene-activated signaling pathway",6]
["negative regulation of exit from mitosis",1]
["negative regulation of exocytosis",1]
["negative regulation of exosomal secretion",1]
["negative regulation of extrinsic apoptotic signaling pathway",1]
["negative regulation of fertilization",1]
["negative regulation of floral organ abscission",1]
["negative regulation of flower development",7]
["negative regulation of G1/S transition of mitotic cell cycle",2]
["negative regulation of G2/M transition of mitotic cell cycle",3]
["negative regulation of gene expression",66]
["negative regulation of gene expression- epigenetic",8]
["negative regulation of gene silencing",7]
["negative regulation of gene silencing by miRNA",1]
["negative regulation of gene silencing by RNA",1]
["negative regulation of gibberellic acid mediated signaling pathway",1]
["negative regulation of glycolytic process",1]
["negative regulation of growth",5]
["negative regulation of GTPase activity",3]
["negative regulation of heart growth",1]
["negative regulation of hemopoiesis",1]
["negative regulation of hippo signaling",1]
["negative regulation of histone acetylation",2]
["negative regulation of histone modification",2]
["negative regulation of hormone biosynthetic process",3]
["negative regulation of hormone metabolic process",3]
["negative regulation of hydrolase activity",9]
["negative regulation of I-kappaB kinase/NF-kappaB signaling",1]
["negative regulation of immune effector process",1]
["negative regulation of immune response",5]
["negative regulation of immune system process",5]
["negative regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["negative regulation of inflammatory response",1]
["negative regulation of innate immune response",3]
["negative regulation of insulin receptor signaling pathway",1]
["negative regulation of interleukin-8 production",2]
["negative regulation of intracellular estrogen receptor signaling pathway",1]
["negative regulation of intracellular signal transduction",15]
["negative regulation of intracellular steroid hormone receptor signaling pathway",1]
["negative regulation of intralumenal vesicle formation",1]
["negative regulation of intrinsic apoptotic signaling pathway",1]
["negative regulation of ion transmembrane transport",1]
["negative regulation of ion transmembrane transporter activity",1]
["negative regulation of ion transport",1]
["negative regulation of JNK cascade",1]
["negative regulation of kinase activity",4]
["negative regulation of lateral root development",1]
["negative regulation of leaf development",1]
["negative regulation of leaf senescence",1]
["negative regulation of leukocyte activation",1]
["negative regulation of leukocyte differentiation",1]
["negative regulation of leukocyte proliferation",1]
["negative regulation of lipid localization",1]
["negative regulation of lipid storage",1]
["negative regulation of long-day photoperiodism- flowering",1]
["negative regulation of macromolecule biosynthetic process",48]
["negative regulation of macromolecule metabolic process",101]
["negative regulation of MAP kinase activity",3]
["negative regulation of MAPK cascade",4]
["negative regulation of mast cell activation",1]
["negative regulation of mast cell activation involved in immune response",1]
["negative regulation of mast cell proliferation",1]
["negative regulation of meiosis I",2]
["negative regulation of meiotic cell cycle",4]
["negative regulation of meiotic cell cycle phase transition",1]
["negative regulation of meiotic chromosome separation",1]
["negative regulation of meiotic nuclear division",4]
["negative regulation of mesoderm development",1]
["negative regulation of metabolic process",113]
["negative regulation of metaphase/anaphase transition of cell cycle",4]
["negative regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["negative regulation of MHC class II biosynthetic process",2]
["negative regulation of mitotic cell cycle",14]
["negative regulation of mitotic cell cycle DNA replication",1]
["negative regulation of mitotic cell cycle phase transition",9]
["negative regulation of mitotic cytokinesis",1]
["negative regulation of mitotic cytokinetic process",1]
["negative regulation of mitotic metaphase/anaphase transition",4]
["negative regulation of mitotic nuclear division",6]
["negative regulation of mitotic sister chromatid segregation",4]
["negative regulation of mitotic sister chromatid separation",4]
["negative regulation of molecular function",20]
["negative regulation of mRNA catabolic process",2]
["negative regulation of mRNA metabolic process",2]
["negative regulation of multi-organism process",6]
["negative regulation of multicellular organism growth",1]
["negative regulation of multicellular organismal process",21]
["negative regulation of muscle cell apoptotic process",1]
["negative regulation of muscle organ development",1]
["negative regulation of muscle tissue development",1]
["negative regulation of myeloid cell differentiation",1]
["negative regulation of myeloid leukocyte differentiation",1]
["negative regulation of nervous system development",1]
["negative regulation of neurogenesis",1]
["negative regulation of neuron apoptotic process",1]
["negative regulation of neuron death",1]
["negative regulation of neuron differentiation",1]
["negative regulation of neuron projection development",1]
["negative regulation of nitrogen compound metabolic process",74]
["negative regulation of nodal signaling pathway",1]
["negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["negative regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["negative regulation of non-canonical Wnt signaling pathway",1]
["negative regulation of nuclear cell cycle DNA replication",1]
["negative regulation of nuclear division",9]
["negative regulation of nucleic acid-templated transcription",28]
["negative regulation of nucleobase-containing compound metabolic process",49]
["negative regulation of nucleotide biosynthetic process",1]
["negative regulation of nucleotide catabolic process",1]
["negative regulation of nucleotide metabolic process",1]
["negative regulation of olefin biosynthetic process",3]
["negative regulation of olefin metabolic process",3]
["negative regulation of organ growth",1]
["negative regulation of organelle organization",22]
["negative regulation of osteoclast development",1]
["negative regulation of osteoclast differentiation",1]
["negative regulation of oxidoreductase activity",1]
["negative regulation of peptidase activity",2]
["negative regulation of peptide secretion",1]
["negative regulation of peptidyl-lysine acetylation",3]
["negative regulation of peptidyl-serine phosphorylation",1]
["negative regulation of peptidyl-serine phosphorylation of STAT protein",1]
["negative regulation of phosphatase activity",4]
["negative regulation of phosphate metabolic process",11]
["negative regulation of phosphoprotein phosphatase activity",3]
["negative regulation of phosphorelay signal transduction system",6]
["negative regulation of phosphorus metabolic process",11]
["negative regulation of phosphorylation",7]
["negative regulation of photomorphogenesis",2]
["negative regulation of photosynthesis",4]
["negative regulation of photosynthesis- light reaction",4]
["negative regulation of plant-type hypersensitive response",1]
["negative regulation of post-embryonic development",14]
["negative regulation of posttranscriptional gene silencing",3]
["negative regulation of potassium ion transmembrane transport",1]
["negative regulation of potassium ion transmembrane transporter activity",1]
["negative regulation of potassium ion transport",1]
["negative regulation of pri-miRNA transcription by RNA polymerase II",1]
["negative regulation of production of miRNAs involved in gene silencing by miRNA",1]
["negative regulation of programmed cell death",11]
["negative regulation of proteasomal protein catabolic process",2]
["negative regulation of proteasomal ubiquitin-dependent protein catabolic process",2]
["negative regulation of protein acetylation",3]
["negative regulation of protein catabolic process",3]
["negative regulation of protein dephosphorylation",3]
["negative regulation of protein depolymerization",1]
["negative regulation of protein K63-linked ubiquitination",1]
["negative regulation of protein kinase activity",4]
["negative regulation of protein metabolic process",24]
["negative regulation of protein modification by small protein conjugation or removal",1]
["negative regulation of protein modification process",13]
["negative regulation of protein phosphorylation",6]
["negative regulation of protein polymerization",3]
["negative regulation of protein polyubiquitination",1]
["negative regulation of protein secretion",1]
["negative regulation of protein serine/threonine kinase activity",4]
["negative regulation of protein transport",1]
["negative regulation of protein ubiquitination",1]
["negative regulation of protein-containing complex assembly",3]
["negative regulation of protein-containing complex disassembly",2]
["negative regulation of proteolysis",4]
["negative regulation of proteolysis involved in cellular protein catabolic process",2]
["negative regulation of purine nucleotide biosynthetic process",1]
["negative regulation of purine nucleotide metabolic process",1]
["negative regulation of Ras protein signal transduction",2]
["negative regulation of reciprocal meiotic recombination",2]
["negative regulation of reproductive process",13]
["negative regulation of response to alcohol",8]
["negative regulation of response to biotic stimulus",4]
["negative regulation of response to DNA damage stimulus",1]
["negative regulation of response to endoplasmic reticulum stress",3]
["negative regulation of response to external stimulus",5]
["negative regulation of response to stimulus",59]
["negative regulation of RNA biosynthetic process",28]
["negative regulation of RNA catabolic process",3]
["negative regulation of RNA metabolic process",31]
["negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["negative regulation of secondary metabolite biosynthetic process",1]
["negative regulation of secretion",2]
["negative regulation of secretion by cell",2]
["negative regulation of seed germination",3]
["negative regulation of septation initiation signaling",1]
["negative regulation of sequestering of triglyceride",1]
["negative regulation of short-day photoperiodism- flowering",1]
["negative regulation of signal transduction",39]
["negative regulation of signaling",41]
["negative regulation of sinapate ester biosynthetic process",1]
["negative regulation of sister chromatid segregation",4]
["negative regulation of small GTPase mediated signal transduction",2]
["negative regulation of small molecule metabolic process",4]
["negative regulation of stress-activated MAPK cascade",1]
["negative regulation of stress-activated protein kinase signaling cascade",1]
["negative regulation of striated muscle cell apoptotic process",1]
["negative regulation of striated muscle tissue development",1]
["negative regulation of sulfur amino acid metabolic process",3]
["negative regulation of sulfur metabolic process",3]
["negative regulation of supramolecular fiber organization",2]
["negative regulation of synaptic transmission",2]
["negative regulation of synaptic transmission- glutamatergic",2]
["negative regulation of systemic acquired resistance",1]
["negative regulation of telomerase activity",1]
["negative regulation of telomere maintenance",4]
["negative regulation of telomere maintenance via telomerase",4]
["negative regulation of telomere maintenance via telomere lengthening",4]
["negative regulation of tetrapyrrole biosynthetic process",1]
["negative regulation of tetrapyrrole metabolic process",1]
["negative regulation of transcription by RNA polymerase II",6]
["negative regulation of transcription regulatory region DNA binding",1]
["negative regulation of transcription- DNA-templated",25]
["negative regulation of transferase activity",5]
["negative regulation of transforming growth factor beta receptor signaling pathway",1]
["negative regulation of translation",6]
["negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",3]
["negative regulation of transmembrane transport",1]
["negative regulation of transport",3]
["negative regulation of transporter activity",1]
["negative regulation of ubiquitin-dependent protein catabolic process",2]
["negative regulation of vacuole fusion- non-autophagic",1]
["negative regulation of Wnt signaling pathway",4]
["nematode larval development",3]
["nervous system development",22]
["nervous system process",6]
["neural precursor cell proliferation",2]
["neural tube development",2]
["neural tube formation",1]
["neuroblast division",1]
["neuroblast proliferation",1]
["neurogenesis",16]
["neuromuscular junction development",1]
["neuromuscular process",1]
["neuron apoptotic process",1]
["neuron death",1]
["neuron development",6]
["neuron differentiation",9]
["neuron projection",5]
["neuron projection development",5]
["neuron projection guidance",1]
["neuron projection morphogenesis",2]
["neuron projection terminus",1]
["neuron spine",1]
["neuronal cell body",4]
["neuronal stem cell division",1]
["neurotransmitter binding",1]
["neurotransmitter biosynthetic process",5]
["neurotransmitter catabolic process",3]
["neurotransmitter metabolic process",8]
["neurotransmitter secretion",2]
["neurotransmitter transmembrane transporter activity",2]
["neurotransmitter transport",4]
["neutral amino acid transmembrane transporter activity",2]
["neutral amino acid transport",3]
["neutral lipid biosynthetic process",4]
["neutral lipid catabolic process",3]
["neutral lipid metabolic process",7]
["neutrophil activation",3]
["neutrophil activation involved in immune response",3]
["neutrophil degranulation",3]
["neutrophil mediated immunity",3]
["NF-kappaB binding",2]
["nickel cation binding",1]
["nicotinamidase activity",1]
["nicotinamide metabolic process",1]
["nicotinamide nucleotide biosynthetic process",14]
["nicotinamide nucleotide biosynthetic process from aspartate",1]
["nicotinamide nucleotide metabolic process",23]
["nicotinamide-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide diphosphorylase (carboxylating) activity",1]
["nitrate assimilation",1]
["nitrate metabolic process",1]
["nitrate reductase (NADH) activity",1]
["nitrate reductase activity",2]
["nitrate transmembrane transporter activity",1]
["nitrate transport",2]
["nitric oxide biosynthetic process",2]
["nitric oxide mediated signal transduction",1]
["nitric oxide metabolic process",2]
["nitrile biosynthetic process",1]
["nitrile metabolic process",1]
["nitrite reductase (NO-forming) activity",1]
["nitrite reductase activity",1]
["nitrite transport",1]
["nitrogen compound metabolic process",931]
["nitrogen compound transport",140]
["nitrogen cycle metabolic process",3]
["nitrogen utilization",2]
["NLS-bearing protein import into nucleus",6]
["NMS complex",1]
["Noc complex",1]
["Noc1p-Noc2p complex",1]
["Noc2p-Noc3p complex",1]
["nodulation",4]
["non-canonical Wnt signaling pathway",1]
["non-membrane-bounded organelle",284]
["non-motile cilium",1]
["non-motile cilium assembly",1]
["non-photoreactive DNA repair",2]
["non-reproductive fruiting body development",5]
["nonfunctional rRNA decay",2]
["nonphotochemical quenching",1]
["Notch signaling pathway",2]
["npBAF complex",1]
["nuclear body",34]
["nuclear cap binding complex",2]
["nuclear cell cycle DNA replication initiation",1]
["nuclear chromosome",48]
["nuclear chromosome segregation",33]
["nuclear dicing body",1]
["nuclear division",49]
["nuclear DNA replication",5]
["nuclear DNA-directed RNA polymerase complex",16]
["nuclear envelope",37]
["nuclear envelope organization",5]
["nuclear exosome (RNase complex)",5]
["nuclear export",23]
["nuclear export signal receptor activity",4]
["nuclear import signal receptor activity",1]
["nuclear lamina",2]
["nuclear localization sequence binding",5]
["nuclear lumen",260]
["nuclear matrix",7]
["nuclear membrane",13]
["nuclear membrane fusion",1]
["nuclear membrane reassembly",4]
["nuclear migration",1]
["nuclear migration along microfilament",1]
["nuclear mRNA surveillance",7]
["nuclear mRNA surveillance of mRNA 3'-end processing",1]
["nuclear mRNA surveillance of spliceosomal pre-mRNA splicing",2]
["nuclear ncRNA surveillance",5]
["nuclear origin of replication recognition complex",4]
["nuclear outer membrane-endoplasmic reticulum membrane network",76]
["nuclear periphery",14]
["nuclear polyadenylation-dependent mRNA catabolic process",2]
["nuclear polyadenylation-dependent ncRNA catabolic process",5]
["nuclear polyadenylation-dependent rRNA catabolic process",5]
["nuclear polyadenylation-dependent tRNA catabolic process",3]
["nuclear pore",11]
["nuclear pore central transport channel",2]
["nuclear pore cytoplasmic filaments",1]
["nuclear pore inner ring",1]
["nuclear pore localization",2]
["nuclear pore organization",2]
["nuclear pore outer ring",2]
["nuclear pre-replicative complex",3]
["nuclear proteasome complex",2]
["nuclear receptor binding",5]
["nuclear replication fork",8]
["nuclear replisome",3]
["nuclear retention of pre-mRNA at the site of transcription",4]
["nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription",1]
["nuclear retention of unspliced pre-mRNA at the site of transcription",2]
["nuclear RNA surveillance",7]
["nuclear speck",21]
["nuclear telomere cap complex",1]
["nuclear transport",36]
["nuclear ubiquitin ligase complex",4]
["nuclear-transcribed mRNA catabolic process",24]
["nuclear-transcribed mRNA catabolic process- 3'-5' exonucleolytic nonsense-mediated decay",2]
["nuclear-transcribed mRNA catabolic process- deadenylation-dependent decay",12]
["nuclear-transcribed mRNA catabolic process- deadenylation-independent decay",2]
["nuclear-transcribed mRNA catabolic process- exonucleolytic",8]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 3'-5'",5]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 5'-3'",1]
["nuclear-transcribed mRNA catabolic process- no-go decay",1]
["nuclear-transcribed mRNA catabolic process- non-stop decay",2]
["nuclear-transcribed mRNA catabolic process- nonsense-mediated decay",6]
["nuclear-transcribed mRNA poly(A) tail shortening",1]
["nuclease activity",49]
["nucleic acid binding",234]
["nucleic acid metabolic process",350]
["nucleic acid phosphodiester bond hydrolysis",71]
["nucleic acid transport",22]
["nucleic acid-templated transcription",33]
["nucleobase biosynthetic process",4]
["nucleobase catabolic process",7]
["nucleobase metabolic process",16]
["nucleobase transmembrane transporter activity",2]
["nucleobase transport",2]
["nucleobase-containing compound biosynthetic process",101]
["nucleobase-containing compound catabolic process",50]
["nucleobase-containing compound kinase activity",11]
["nucleobase-containing compound metabolic process",431]
["nucleobase-containing compound transmembrane transporter activity",14]
["nucleobase-containing compound transport",38]
["nucleobase-containing small molecule biosynthetic process",22]
["nucleobase-containing small molecule catabolic process",3]
["nucleobase-containing small molecule metabolic process",87]
["nucleocytoplasmic carrier activity",5]
["nucleocytoplasmic transport",36]
["nucleocytoplasmic transport complex",1]
["nucleoid",13]
["nucleoid DNA packaging",1]
["nucleolar chromatin",1]
["nucleolar ribonuclease P complex",1]
["nucleologenesis",1]
["nucleolus",108]
["nucleolus organization",2]
["nucleoplasm",131]
["nucleoside binding",15]
["nucleoside biosynthetic process",8]
["nucleoside bisphosphate biosynthetic process",4]
["nucleoside bisphosphate catabolic process",1]
["nucleoside bisphosphate metabolic process",9]
["nucleoside catabolic process",1]
["nucleoside diphosphate biosynthetic process",1]
["nucleoside diphosphate metabolic process",11]
["nucleoside diphosphate phosphorylation",10]
["nucleoside kinase activity",5]
["nucleoside metabolic process",14]
["nucleoside monophosphate biosynthetic process",19]
["nucleoside monophosphate kinase activity",4]
["nucleoside monophosphate metabolic process",30]
["nucleoside monophosphate phosphorylation",4]
["nucleoside phosphate binding",77]
["nucleoside phosphate biosynthetic process",41]
["nucleoside phosphate catabolic process",14]
["nucleoside phosphate metabolic process",65]
["nucleoside salvage",4]
["nucleoside transport",1]
["nucleoside triphosphate biosynthetic process",13]
["nucleoside triphosphate catabolic process",1]
["nucleoside triphosphate metabolic process",21]
["nucleoside-diphosphatase activity",4]
["nucleoside-triphosphatase activity",139]
["nucleoside-triphosphatase regulator activity",15]
["nucleoside-triphosphate diphosphatase activity",1]
["nucleosomal DNA binding",2]
["nucleosomal histone binding",1]
["nucleosome assembly",4]
["nucleosome binding",4]
["nucleosome disassembly",2]
["nucleosome mobilization",1]
["nucleosome organization",9]
["nucleosome positioning",1]
["nucleotidase activity",2]
["nucleotide binding",77]
["nucleotide biosynthetic process",41]
["nucleotide catabolic process",13]
["nucleotide diphosphatase activity",1]
["nucleotide metabolic process",65]
["nucleotide phosphorylation",11]
["nucleotide salvage",1]
["nucleotide transmembrane transport",8]
["nucleotide transmembrane transporter activity",8]
["nucleotide transport",9]
["nucleotide-excision repair",18]
["nucleotide-excision repair complex",5]
["nucleotide-excision repair factor 1 complex",2]
["nucleotide-excision repair factor 2 complex",1]
["nucleotide-excision repair involved in interstrand cross-link repair",1]
["nucleotide-excision repair- DNA damage recognition",4]
["nucleotide-excision repair- DNA gap filling",3]
["nucleotide-excision repair- DNA incision",6]
["nucleotide-excision repair- DNA incision- 5'-to lesion",5]
["nucleotide-excision repair- preincision complex assembly",4]
["nucleotide-excision repair- preincision complex stabilization",1]
["nucleotide-sugar biosynthetic process",5]
["nucleotide-sugar metabolic process",7]
["nucleotide-sugar transmembrane transport",10]
["nucleotide-sugar transmembrane transporter activity",7]
["nucleotidyltransferase activity",25]
["nucleus",578]
["nucleus localization",1]
["nucleus organization",18]
["NuRD complex",2]
["nurse cell apoptotic process",1]
["O-acetyltransferase activity",5]
["O-acyltransferase activity",11]
["O-methyltransferase activity",4]
["obsolete antibiotic transmembrane transporter activity",1]
["obsolete antibiotic transport",4]
["obsolete ATPase-coupled amide-transporter activity",2]
["obsolete axon part",2]
["obsolete axoneme part",3]
["obsolete cell",1875]
["obsolete cell cortex part",8]
["obsolete cell division site part",3]
["obsolete cell part",1875]
["obsolete cell projection part",16]
["obsolete cell septum part",1]
["obsolete cell wall part",3]
["obsolete cellular process regulating host cell cycle in response to virus",1]
["obsolete chloroplast part",303]
["obsolete chromosomal part",75]
["obsolete ciliary part",8]
["obsolete coenzyme binding",29]
["obsolete coenzyme biosynthetic process",40]
["obsolete coenzyme catabolic process",3]
["obsolete coenzyme metabolic process",62]
["obsolete coenzyme transmembrane transporter activity",2]
["obsolete coenzyme transport",2]
["obsolete cofactor binding",41]
["obsolete cofactor biosynthetic process",59]
["obsolete cofactor catabolic process",14]
["obsolete cofactor metabolic process",102]
["obsolete cofactor transmembrane transporter activity",3]
["obsolete cofactor transport",9]
["obsolete contractile fiber part",1]
["obsolete cytoplasmic part",1306]
["obsolete cytoplasmic vesicle part",44]
["obsolete cytoskeletal part",53]
["obsolete cytosolic part",30]
["obsolete DNA strand renaturation",1]
["obsolete endoplasmic reticulum part",84]
["obsolete endosomal part",30]
["obsolete external encapsulating structure part",3]
["obsolete extracellular region part",12]
["obsolete Golgi apparatus part",82]
["obsolete intracellular organelle part",969]
["obsolete intracellular part",1771]
["obsolete membrane part",234]
["obsolete microbody part",10]
["obsolete microtubule organizing center part",6]
["obsolete mitochondrial membrane part",21]
["obsolete mitochondrial part",76]
["obsolete modulation of growth of symbiont involved in interaction with host",1]
["obsolete movement in environment of other organism involved in symbiotic interaction",2]
["obsolete movement in other organism involved in symbiotic interaction",1]
["obsolete multi organism cell adhesion",1]
["obsolete multi-organism intracellular transport",1]
["obsolete negative regulation of chromatin silencing involved in replicative cell aging",1]
["obsolete negative regulation of coenzyme metabolic process",1]
["obsolete negative regulation of cofactor metabolic process",2]
["obsolete negative regulation of growth of symbiont in host",1]
["obsolete negative regulation of growth of symbiont involved in interaction with host",1]
["obsolete neuron part",8]
["obsolete non-recombinational repair",7]
["obsolete nuclear chromosome part",44]
["obsolete nuclear part",315]
["obsolete nuclear telomeric heterochromatin",1]
["obsolete nucleolar part",13]
["obsolete nucleoplasm part",74]
["obsolete organelle part",970]
["obsolete other organism",1]
["obsolete other organism cell",1]
["obsolete oxidation-reduction process",187]
["obsolete oxidoreductase activity- acting on diphenols and related substances as donors- cytochrome as acceptor",1]
["obsolete oxidoreduction coenzyme metabolic process",28]
["obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction",1]
["obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response",1]
["obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction",3]
["obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response",3]
["obsolete pathogenesis",1]
["obsolete pattern binding",7]
["obsolete peroxisomal part",10]
["obsolete plasma membrane bounded cell projection part",16]
["obsolete plasma membrane part",43]
["obsolete plastid part",309]
["obsolete positive regulation of cofactor metabolic process",1]
["obsolete positive regulation of protein import into nucleus- translocation",1]
["obsolete positive regulation of receptor biosynthetic process",1]
["obsolete progressive alteration of chromatin involved in replicative cell aging",1]
["obsolete protein import into nucleus- translocation",3]
["obsolete protein transporter activity",18]
["obsolete protein-cofactor linkage",3]
["obsolete purine NTP-dependent helicase activity",38]
["obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of coenzyme metabolic process",3]
["obsolete regulation of cofactor metabolic process",8]
["obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of growth of symbiont in host",1]
["obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of protein import into nucleus- translocation",1]
["obsolete regulation of receptor biosynthetic process",2]
["obsolete regulation of transcription involved in cell fate commitment",1]
["obsolete replicative cell aging",1]
["obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly",1]
["obsolete RNA polymerase II transcription regulator recruiting activity",2]
["obsolete sperm part",1]
["obsolete synapse part",6]
["obsolete telomeric heterochromatin",1]
["obsolete thylakoid part",77]
["obsolete transcription factor activity- core RNA polymerase binding",4]
["obsolete transcription factor activity- core RNA polymerase II binding",2]
["obsolete transcription factor activity- protein binding",7]
["obsolete transcription factor activity- RNA polymerase II transcription factor binding",3]
["obsolete transcription factor activity- transcription factor binding",3]
["obsolete transcription regulator recruiting activity",2]
["obsolete vacuolar part",105]
["odontogenesis",1]
["odontogenesis of dentin-containing tooth",1]
["olefin biosynthetic process",1]
["olefin metabolic process",1]
["oligodendrocyte development",2]
["oligodendrocyte differentiation",2]
["oligopeptide binding",1]
["oligopeptide transmembrane transport",1]
["oligopeptide transport",2]
["oligosaccharide binding",1]
["oligosaccharide biosynthetic process",5]
["oligosaccharide catabolic process",6]
["oligosaccharide metabolic process",15]
["oligosaccharide transmembrane transporter activity",2]
["oligosaccharide transport",3]
["oligosaccharide-lipid intermediate biosynthetic process",8]
["oligosaccharyl transferase activity",3]
["oligosaccharyltransferase complex",5]
["omega peptidase activity",1]
["omega-6 fatty acid desaturase activity",1]
["one-carbon compound transport",2]
["one-carbon metabolic process",4]
["oocyte development",2]
["oocyte differentiation",2]
["oocyte growth",1]
["oogenesis",4]
["open tracheal system development",1]
["organ boundary specification between lateral organs and the meristem",1]
["organ growth",1]
["organellar large ribosomal subunit",2]
["organellar ribosome",4]
["organellar small ribosomal subunit",1]
["organelle",1540]
["organelle assembly",53]
["organelle disassembly",13]
["organelle envelope",245]
["organelle envelope lumen",1]
["organelle fission",62]
["organelle fusion",13]
["organelle inheritance",1]
["organelle inner membrane",62]
["organelle localization",25]
["organelle localization by membrane tethering",6]
["organelle lumen",302]
["organelle membrane",250]
["organelle membrane contact site",3]
["organelle membrane fusion",10]
["organelle organization",338]
["organelle outer membrane",23]
["organelle subcompartment",226]
["organelle transport along microtubule",3]
["organic acid binding",9]
["organic acid biosynthetic process",83]
["organic acid catabolic process",32]
["organic acid metabolic process",178]
["organic acid transmembrane transport",28]
["organic acid transmembrane transporter activity",28]
["organic acid transport",31]
["organic anion transmembrane transporter activity",41]
["organic anion transport",50]
["organic cation transmembrane transporter activity",4]
["organic cation transport",6]
["organic cyclic compound binding",319]
["organic cyclic compound biosynthetic process",178]
["organic cyclic compound catabolic process",70]
["organic cyclic compound metabolic process",522]
["organic heteropentacyclic compound biosynthetic process",1]
["organic heteropentacyclic compound metabolic process",1]
["organic hydroxy compound biosynthetic process",35]
["organic hydroxy compound catabolic process",8]
["organic hydroxy compound metabolic process",50]
["organic hydroxy compound transmembrane transporter activity",4]
["organic hydroxy compound transport",6]
["organic substance biosynthetic process",466]
["organic substance catabolic process",223]
["organic substance metabolic process",1130]
["organic substance transport",175]
["organonitrogen compound biosynthetic process",238]
["organonitrogen compound catabolic process",119]
["organonitrogen compound metabolic process",623]
["organophosphate biosynthetic process",78]
["organophosphate catabolic process",21]
["organophosphate ester transmembrane transporter activity",8]
["organophosphate ester transport",12]
["organophosphate metabolic process",120]
["origin recognition complex",4]
["ornithine biosynthetic process",1]
["ornithine metabolic process",3]
["ornithine transport",1]
["ossification",2]
["osteoblast differentiation",1]
["osteoblast proliferation",1]
["other organism part",1]
["otic vesicle development",1]
["otic vesicle morphogenesis",1]
["outer acrosomal membrane",1]
["outer dynein arm assembly",1]
["outer membrane",23]
["outer membrane-bounded periplasmic space",1]
["outer mitochondrial membrane protein complex",1]
["ovarian follicle cell development",1]
["ovarian follicle cell migration",1]
["ovarian follicle development",1]
["oxaloacetate metabolic process",1]
["oxaloacetate transmembrane transporter activity",2]
["oxaloacetate transport",2]
["oxaloacetate(2-) transmembrane transport",2]
["oxazole or thiazole biosynthetic process",1]
["oxazole or thiazole metabolic process",1]
["oxidative demethylation",1]
["oxidative DNA demethylation",1]
["oxidative phosphorylation",3]
["oxidative photosynthetic carbon pathway",2]
["oxidative single-stranded DNA demethylation",1]
["oxidized base lesion DNA N-glycosylase activity",1]
["oxidized DNA binding",1]
["oxidized purine DNA binding",1]
["oxidized purine nucleobase lesion DNA N-glycosylase activity",1]
["oxidoreductase activity",152]
["oxidoreductase activity- acting on a sulfur group of donors",10]
["oxidoreductase activity- acting on a sulfur group of donors- disulfide as acceptor",2]
["oxidoreductase activity- acting on a sulfur group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- NAD(P) as acceptor",5]
["oxidoreductase activity- acting on a sulfur group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on CH or CH2 groups",1]
["oxidoreductase activity- acting on CH or CH2 groups- with an iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on CH-OH group of donors",31]
["oxidoreductase activity- acting on diphenols and related substances as donors",4]
["oxidoreductase activity- acting on diphenols and related substances as donors- oxygen as acceptor",3]
["oxidoreductase activity- acting on iron-sulfur proteins as donors",2]
["oxidoreductase activity- acting on iron-sulfur proteins as donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions",8]
["oxidoreductase activity- acting on metal ions- flavin as acceptor",1]
["oxidoreductase activity- acting on metal ions- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions- oxygen as acceptor",1]
["oxidoreductase activity- acting on NAD(P)H",19]
["oxidoreductase activity- acting on NAD(P)H- heme protein as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- NAD(P) as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- quinone or similar compound as acceptor",5]
["oxidoreductase activity- acting on other nitrogenous compounds as donors",4]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- with NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen",21]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- NAD(P)H as one donor- and incorporation of one atom of oxygen",12]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- reduced iron-sulfur protein as one donor- and incorporation of one atom of oxygen",1]
["oxidoreductase activity- acting on paired donors- with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water",2]
["oxidoreductase activity- acting on peroxide as acceptor",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)",1]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of two atoms of oxygen",4]
["oxidoreductase activity- acting on superoxide radicals as acceptor",1]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors",7]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors- NAD or NADP as acceptor",7]
["oxidoreductase activity- acting on the CH-CH group of donors",18]
["oxidoreductase activity- acting on the CH-CH group of donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- NAD or NADP as acceptor",5]
["oxidoreductase activity- acting on the CH-CH group of donors- oxygen as acceptor",4]
["oxidoreductase activity- acting on the CH-CH group of donors- quinone or related compound as acceptor",2]
["oxidoreductase activity- acting on the CH-NH group of donors",8]
["oxidoreductase activity- acting on the CH-NH group of donors- NAD or NADP as acceptor",5]
["oxidoreductase activity- acting on the CH-NH group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-NH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors",2]
["oxidoreductase activity- acting on the CH-NH2 group of donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-OH group of donors- cytochrome as acceptor",2]
["oxidoreductase activity- acting on the CH-OH group of donors- NAD or NADP as acceptor",28]
["oxidoreductase activity- acting on the CH-OH group of donors- oxygen as acceptor",2]
["oxidoreductase activity- acting on the CH-OH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase complex",11]
["oxo-acid-lyase activity",2]
["oxoacid metabolic process",178]
["oxoglutarate:malate antiporter activity",1]
["oxygen-dependent protoporphyrinogen oxidase activity",1]
["P granule",1]
["P-body",11]
["P-body assembly",2]
["p-coumarate 3-hydroxylase activity",1]
["p-coumaryl alcohol transport",1]
["P-P-bond-hydrolysis-driven protein transmembrane transporter activity",6]
["P-type ion transporter activity",1]
["P-type proton-exporting transporter activity",4]
["P4 peroxisome",1]
["palisade mesophyll development",1]
["pallium development",2]
["palmitoyl hydrolase activity",1]
["palmitoyl-(protein) hydrolase activity",1]
["palmitoyltransferase activity",1]
["palmitoyltransferase complex",2]
["PAM complex- Tim23 associated import motor",1]
["pancreas development",2]
["pantothenate biosynthetic process",1]
["pantothenate metabolic process",1]
["para-aminobenzoic acid biosynthetic process",1]
["para-aminobenzoic acid metabolic process",1]
["paraspeckles",1]
["Parkin-FBXW7-Cul1 ubiquitin ligase complex",1]
["passive transmembrane transporter activity",17]
["pattern recognition receptor signaling pathway",2]
["pattern specification process",33]
["PcG protein complex",1]
["PDZ domain binding",1]
["PeBoW complex",3]
["pectic galactan metabolic process",1]
["pectin biosynthetic process",6]
["pectin catabolic process",1]
["pectin metabolic process",10]
["pectinesterase activity",2]
["pectinesterase inhibitor activity",1]
["pectoral fin development",2]
["pectoral fin morphogenesis",2]
["pentose biosynthetic process",1]
["pentose catabolic process",2]
["pentose metabolic process",5]
["pentose-phosphate shunt",4]
["pentose-phosphate shunt- non-oxidative branch",2]
["pentose-phosphate shunt- oxidative branch",2]
["pentosyltransferase activity",11]
["peptidase activator activity",2]
["peptidase activity",101]
["peptidase complex",21]
["peptidase inhibitor activity",1]
["peptidase regulator activity",3]
["peptide binding",14]
["peptide biosynthetic process",61]
["peptide catabolic process",2]
["peptide deformylase activity",1]
["peptide metabolic process",69]
["peptide N-acetyltransferase activity",4]
["peptide receptor activity",1]
["peptide secretion",1]
["peptide transmembrane transporter activity",6]
["peptide transport",98]
["peptide-lysine-N-acetyltransferase activity",4]
["peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity",1]
["peptide-O-fucosyltransferase activity",1]
["peptidoglycan catabolic process",1]
["peptidoglycan metabolic process",1]
["peptidoglycan-based cell wall",1]
["peptidoglycan-based cell wall biogenesis",1]
["peptidyl-amino acid modification",87]
["peptidyl-arginine methylation",7]
["peptidyl-arginine methylation- to asymmetrical-dimethyl arginine",4]
["peptidyl-arginine methylation- to symmetrical-dimethyl arginine",1]
["peptidyl-arginine modification",7]
["peptidyl-arginine N-methylation",6]
["peptidyl-arginine omega-N-methylation",5]
["peptidyl-asparagine modification",8]
["peptidyl-diphthamide biosynthetic process from peptidyl-histidine",3]
["peptidyl-diphthamide metabolic process",3]
["peptidyl-glutamine modification",1]
["peptidyl-glycine modification",1]
["peptidyl-histidine modification",6]
["peptidyl-histidine phosphorylation",3]
["peptidyl-lysine acetylation",8]
["peptidyl-lysine dimethylation",1]
["peptidyl-lysine methylation",14]
["peptidyl-lysine modification",31]
["peptidyl-lysine modification to peptidyl-hypusine",2]
["peptidyl-lysine monomethylation",2]
["peptidyl-lysine trimethylation",5]
["peptidyl-methionine modification",1]
["peptidyl-proline 4-dioxygenase activity",1]
["peptidyl-proline dioxygenase activity",1]
["peptidyl-proline hydroxylation",1]
["peptidyl-proline hydroxylation to 4-hydroxy-L-proline",1]
["peptidyl-proline modification",22]
["peptidyl-prolyl cis-trans isomerase activity",17]
["peptidyl-pyroglutamic acid biosynthetic process- using glutaminyl-peptide cyclotransferase",1]
["peptidyl-serine dephosphorylation",1]
["peptidyl-serine modification",9]
["peptidyl-serine phosphorylation",9]
["peptidyl-threonine dephosphorylation",3]
["peptidyl-threonine modification",3]
["peptidyl-threonine phosphorylation",3]
["peptidyl-tyrosine dephosphorylation",5]
["peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity",1]
["peptidyl-tyrosine modification",2]
["peptidyl-tyrosine phosphorylation",2]
["pericentric heterochromatin assembly",1]
["perikaryon",1]
["perinuclear region of cytoplasm",14]
["peripheral nervous system development",2]
["periplasmic space",2]
["peroxidase activity",6]
["peroxiredoxin activity",1]
["peroxisomal membrane",10]
["peroxisomal membrane transport",3]
["peroxisomal transport",5]
["peroxisome",47]
["peroxisome fission",3]
["peroxisome matrix targeting signal-1 binding",1]
["peroxisome membrane targeting sequence binding",1]
["peroxisome organization",9]
["peroxisome targeting sequence binding",2]
["PET complex",1]
["petal development",1]
["petal vascular tissue pattern formation",1]
["pH reduction",4]
["phagocytic vesicle",3]
["phagocytic vesicle membrane",1]
["phagocytosis",3]
["phagolysosome assembly",2]
["phagolysosome assembly involved in apoptotic cell clearance",2]
["phagophore assembly site",7]
["phagophore assembly site membrane",4]
["phagosome acidification",2]
["phagosome acidification involved in apoptotic cell clearance",1]
["phagosome maturation",3]
["phagosome maturation involved in apoptotic cell clearance",2]
["phagosome-lysosome fusion",1]
["phenol-containing compound catabolic process",2]
["phenol-containing compound metabolic process",2]
["phenylalanine-tRNA ligase activity",1]
["phenylalanine-tRNA ligase complex",1]
["phenylalanyl-tRNA aminoacylation",2]
["phenylpropanoid biosynthetic process",9]
["phenylpropanoid metabolic process",12]
["pheophytinase activity",1]
["phloem development",1]
["phloem or xylem histogenesis",17]
["phloem sucrose loading",1]
["phloem transport",2]
["phosphatase activity",49]
["phosphatase binding",6]
["phosphatase complex",2]
["phosphatase inhibitor activity",4]
["phosphatase regulator activity",9]
["phosphate ion binding",1]
["phosphate ion homeostasis",2]
["phosphate ion transmembrane transport",5]
["phosphate ion transmembrane transporter activity",5]
["phosphate ion transport",7]
["phosphate-containing compound metabolic process",262]
["phosphatidate cytidylyltransferase activity",1]
["phosphatidate phosphatase activity",1]
["phosphatidic acid binding",3]
["phosphatidic acid biosynthetic process",1]
["phosphatidic acid metabolic process",2]
["phosphatidylcholine 12-monooxygenase activity",1]
["phosphatidylcholine biosynthetic process",2]
["phosphatidylcholine catabolic process",1]
["phosphatidylcholine metabolic process",3]
["phosphatidylcholine phospholipase C activity",1]
["phosphatidylcholine transporter activity",1]
["phosphatidylethanolamine catabolic process",1]
["phosphatidylethanolamine metabolic process",1]
["phosphatidylglycerol biosynthetic process",2]
["phosphatidylglycerol metabolic process",4]
["phosphatidylinositol 3-kinase complex",1]
["phosphatidylinositol 3-kinase complex- class III",1]
["phosphatidylinositol 3-kinase complex- class III- type I",1]
["phosphatidylinositol 3-kinase complex- class III- type II",1]
["phosphatidylinositol 3-kinase signaling",1]
["phosphatidylinositol binding",10]
["phosphatidylinositol biosynthetic process",6]
["phosphatidylinositol bisphosphate binding",2]
["phosphatidylinositol bisphosphate phosphatase activity",2]
["phosphatidylinositol dephosphorylation",1]
["phosphatidylinositol kinase activity",2]
["phosphatidylinositol metabolic process",9]
["phosphatidylinositol N-acetylglucosaminyltransferase activity",1]
["phosphatidylinositol phosphate 5-phosphatase activity",2]
["phosphatidylinositol phosphate binding",3]
["phosphatidylinositol phosphate biosynthetic process",2]
["phosphatidylinositol phosphate phosphatase activity",2]
["phosphatidylinositol transfer activity",1]
["phosphatidylinositol trisphosphate phosphatase activity",1]
["phosphatidylinositol-3-4-5-trisphosphate 5-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate 3-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate phosphatase activity",1]
["phosphatidylinositol-3-5-bisphosphate 5-phosphatase activity",1]
["phosphatidylinositol-3-5-bisphosphate binding",2]
["phosphatidylinositol-3-5-bisphosphate phosphatase activity",1]
["phosphatidylinositol-3-phosphate binding",2]
["phosphatidylinositol-3-phosphate biosynthetic process",1]
["phosphatidylinositol-5-phosphate binding",1]
["phosphatidylinositol-mediated signaling",1]
["phosphatidylserine biosynthetic process",2]
["phosphatidylserine metabolic process",2]
["phosphoadenylyl-sulfate reductase (thioredoxin) activity",1]
["phosphodiesterase I activity",1]
["phosphoenolpyruvate carboxykinase activity",2]
["phosphoenolpyruvate carboxylase activity",2]
["phosphoethanolamine N-methyltransferase activity",1]
["phosphofructokinase activity",3]
["phosphoglucomutase activity",2]
["phosphogluconate dehydrogenase (decarboxylating) activity",1]
["phosphoglycerate mutase activity",1]
["phospholipase A1 activity",1]
["phospholipase A2 activity",3]
["phospholipase activator activity",1]
["phospholipase activity",10]
["phospholipase C activity",1]
["phospholipase D activity",3]
["phospholipid binding",18]
["phospholipid biosynthetic process",29]
["phospholipid catabolic process",4]
["phospholipid dephosphorylation",1]
["phospholipid homeostasis",1]
["phospholipid metabolic process",41]
["phospholipid translocation",2]
["phospholipid transport",3]
["phospholipid transporter activity",2]
["phospholipid:diacylglycerol acyltransferase activity",1]
["phosphomethylethanolamine N-methyltransferase activity",1]
["phosphomethylpyrimidine kinase activity",1]
["phosphopantothenoylcysteine decarboxylase activity",1]
["phosphoprotein binding",3]
["phosphoprotein phosphatase activity",13]
["phosphopyruvate hydratase activity",1]
["phosphorelay response regulator activity",4]
["phosphorelay sensor kinase activity",1]
["phosphorelay signal transduction system",14]
["phosphoribosyl-AMP cyclohydrolase activity",1]
["phosphoribosyl-ATP diphosphatase activity",1]
["phosphoribosylaminoimidazolesuccinocarboxamide synthase activity",1]
["phosphoric diester hydrolase activity",6]
["phosphoric ester hydrolase activity",55]
["phosphorus metabolic process",269]
["phosphorylase kinase regulator activity",1]
["phosphorylated carbohydrate dephosphorylation",4]
["phosphorylation",132]
["phosphorylation of RNA polymerase II C-terminal domain",2]
["phosphoserine phosphatase activity",1]
["phosphoserine residue binding",1]
["phosphothreonine residue binding",1]
["phosphotransferase activity- alcohol group as acceptor",103]
["phosphotransferase activity- carboxyl group as acceptor",2]
["phosphotransferase activity- for other substituted phosphate groups",2]
["phosphotransferase activity- nitrogenous group as acceptor",3]
["phosphotransferase activity- phosphate group as acceptor",5]
["photoinhibition",4]
["photomorphogenesis",11]
["photoperiodism",12]
["photoperiodism- flowering",9]
["photoprotection",3]
["photoreactive repair",1]
["photoreceptor activity",1]
["photoreceptor cell cilium",1]
["photoreceptor connecting cilium",1]
["photorespiration",7]
["photosynthesis",30]
["photosynthesis- dark reaction",4]
["photosynthesis- light harvesting",7]
["photosynthesis- light harvesting in photosystem I",3]
["photosynthesis- light reaction",25]
["photosynthetic acclimation",1]
["photosynthetic electron transport chain",8]
["photosynthetic electron transport in photosystem I",2]
["photosynthetic electron transport in photosystem II",3]
["photosynthetic membrane",67]
["photosystem",1]
["photosystem I assembly",4]
["photosystem II",1]
["photosystem II antenna complex",1]
["photosystem II assembly",7]
["photosystem II oxygen evolving complex assembly",2]
["photosystem II repair",3]
["photosystem II stabilization",1]
["photosystem stoichiometry adjustment",2]
["phototransduction",1]
["phototropism",1]
["phragmoplast",10]
["phragmoplast microtubule organization",1]
["phyllome development",69]
["phylloquinone biosynthetic process",1]
["phylloquinone metabolic process",1]
["phytoalexin biosynthetic process",1]
["phytoalexin metabolic process",1]
["phytoceramidase activity",1]
["phytochelatin biosynthetic process",1]
["phytochelatin metabolic process",1]
["phytochromobilin biosynthetic process",1]
["phytochromobilin metabolic process",1]
["phytochromobilin:ferredoxin oxidoreductase activity",1]
["phytol kinase activity",1]
["phytosphingosine biosynthetic process",1]
["phytosphingosine metabolic process",2]
["phytosteroid biosynthetic process",3]
["phytosteroid metabolic process",3]
["phytyl diphosphate biosynthetic process",1]
["phytyl diphosphate metabolic process",1]
["piecemeal microautophagy of the nucleus",2]
["pigment accumulation",1]
["pigment accumulation in response to UV light",1]
["pigment accumulation in tissues",1]
["pigment accumulation in tissues in response to UV light",1]
["pigment binding",3]
["pigment biosynthetic process",29]
["pigment catabolic process",3]
["pigment metabolic process",35]
["pigmentation",1]
["pinocytosis",1]
["pinosome",1]
["piRNA metabolic process",1]
["plant epidermal cell differentiation",23]
["plant epidermis development",41]
["plant epidermis morphogenesis",16]
["plant organ development",147]
["plant organ formation",25]
["plant organ morphogenesis",68]
["plant organ senescence",17]
["plant ovule development",10]
["plant-type cell wall",27]
["plant-type cell wall assembly",1]
["plant-type cell wall biogenesis",17]
["plant-type cell wall cellulose biosynthetic process",1]
["plant-type cell wall cellulose metabolic process",2]
["plant-type cell wall loosening",1]
["plant-type cell wall modification",3]
["plant-type cell wall modification involved in multidimensional cell growth",1]
["plant-type cell wall organization",13]
["plant-type cell wall organization or biogenesis",24]
["plant-type hypersensitive response",4]
["plant-type ovary development",10]
["plant-type primary cell wall biogenesis",1]
["plant-type secondary cell wall biogenesis",4]
["plant-type sporogenesis",2]
["plant-type vacuole",33]
["plant-type vacuole membrane",23]
["plasma membrane",285]
["plasma membrane bounded cell projection",28]
["plasma membrane bounded cell projection assembly",10]
["plasma membrane bounded cell projection cytoplasm",6]
["plasma membrane bounded cell projection morphogenesis",2]
["plasma membrane bounded cell projection organization",15]
["plasma membrane fusion",1]
["plasma membrane protein complex",5]
["plasma membrane pyruvate transport",1]
["plasma membrane region",6]
["plasmalogen synthase activity",1]
["plasmid maintenance",1]
["plasmodesma",123]
["plasmodesma organization",3]
["plasmodesmata-mediated intercellular transport",2]
["plastid",483]
["plastid chromosome",5]
["plastid DNA metabolic process",1]
["plastid DNA packaging",1]
["plastid DNA replication",1]
["plastid envelope",164]
["plastid fission",7]
["plastid inner membrane",23]
["plastid large ribosomal subunit",1]
["plastid localization",1]
["plastid membrane",42]
["plastid membrane organization",12]
["plastid nucleoid",10]
["plastid organization",61]
["plastid outer membrane",15]
["plastid ribosome",2]
["plastid stroma",174]
["plastid thylakoid",81]
["plastid thylakoid lumen",2]
["plastid thylakoid membrane",61]
["plastid transcription",3]
["plastid translation",5]
["plastid-encoded plastid RNA polymerase complex",3]
["plastoglobule",19]
["plastoglobule organization",2]
["plastoquinone biosynthetic process",1]
["platelet degranulation",1]
["plus-end specific microtubule depolymerization",1]
["PML body",2]
["podosome",1]
["polar nucleus fusion",3]
["polarity specification of adaxial/abaxial axis",1]
["pole plasm",1]
["pollen development",50]
["pollen exine formation",8]
["pollen germination",12]
["pollen hydration",1]
["pollen maturation",3]
["pollen sperm cell differentiation",2]
["pollen tube",7]
["pollen tube adhesion",1]
["pollen tube development",17]
["pollen tube growth",10]
["pollen tube guidance",5]
["pollen tube reception",3]
["pollen tube tip",1]
["pollen wall assembly",11]
["pollen-pistil interaction",4]
["pollination",31]
["poly-purine tract binding",1]
["poly-pyrimidine tract binding",8]
["poly(A) binding",1]
["poly(A)+ mRNA export from nucleus",4]
["poly(ADP-ribose) glycohydrolase activity",1]
["poly(U) RNA binding",6]
["polyadenylation-dependent mRNA catabolic process",2]
["polyadenylation-dependent ncRNA catabolic process",6]
["polyadenylation-dependent RNA catabolic process",6]
["polyadenylation-dependent snoRNA 3'-end processing",2]
["polyamine binding",1]
["polyamine biosynthetic process",4]
["polyamine catabolic process",1]
["polyamine metabolic process",5]
["polyamine oxidase activity",1]
["polyamine transmembrane transport",1]
["polyamine transmembrane transporter activity",1]
["polyamine transport",2]
["polygalacturonate 4-alpha-galacturonosyltransferase activity",6]
["polyketide biosynthetic process",1]
["polyketide metabolic process",1]
["polymeric cytoskeletal fiber",18]
["polynucleotide 5' dephosphorylation",1]
["polynucleotide 5'-hydroxyl-kinase activity",2]
["polynucleotide 5'-phosphatase activity",1]
["polynucleotide adenylyltransferase activity",3]
["polynucleotide dephosphorylation",1]
["polynucleotide phosphatase activity",1]
["polyol biosynthetic process",11]
["polyol catabolic process",5]
["polyol metabolic process",18]
["polyol transmembrane transporter activity",2]
["polyol transport",2]
["polyphosphate biosynthetic process",1]
["polyphosphate metabolic process",1]
["polyprenol biosynthetic process",1]
["polyprenol metabolic process",1]
["polyprenyltransferase activity",2]
["polyribonucleotide nucleotidyltransferase activity",1]
["polysaccharide binding",7]
["polysaccharide biosynthetic process",30]
["polysaccharide catabolic process",18]
["polysaccharide localization",7]
["polysaccharide metabolic process",54]
["polysomal ribosome",7]
["polysome",11]
["polyubiquitin modification-dependent protein binding",3]
["polyuridylation-dependent mRNA catabolic process",1]
["porphobilinogen synthase activity",1]
["porphyrin-containing compound biosynthetic process",14]
["porphyrin-containing compound catabolic process",4]
["porphyrin-containing compound metabolic process",20]
["positive chemotaxis",5]
["positive gravitropism",2]
["positive regulation by host of viral genome replication",1]
["positive regulation by host of viral process",2]
["positive regulation of abscisic acid-activated signaling pathway",6]
["positive regulation of actin filament polymerization",4]
["positive regulation of actin nucleation",1]
["positive regulation of alcohol biosynthetic process",1]
["positive regulation of angiogenesis",1]
["positive regulation of anion channel activity",1]
["positive regulation of anion transmembrane transport",1]
["positive regulation of anion transport",2]
["positive regulation of apoptotic process",3]
["positive regulation of apoptotic signaling pathway",1]
["positive regulation of asexual reproduction",1]
["positive regulation of ATP biosynthetic process",1]
["positive regulation of ATP metabolic process",1]
["positive regulation of ATPase activity",2]
["positive regulation of autophagy",6]
["positive regulation of auxin mediated signaling pathway",1]
["positive regulation of behavior",1]
["positive regulation of biological process",202]
["positive regulation of biosynthetic process",52]
["positive regulation of canonical Wnt signaling pathway",1]
["positive regulation of carotenoid biosynthetic process",1]
["positive regulation of catabolic process",18]
["positive regulation of catalytic activity",51]
["positive regulation of cation transmembrane transport",1]
["positive regulation of cell adhesion",1]
["positive regulation of cell adhesion involved in single-species biofilm formation",1]
["positive regulation of cell communication",31]
["positive regulation of cell cycle",26]
["positive regulation of cell cycle checkpoint",2]
["positive regulation of cell cycle G1/S phase transition",2]
["positive regulation of cell cycle G2/M phase transition",4]
["positive regulation of cell cycle phase transition",9]
["positive regulation of cell cycle process",18]
["positive regulation of cell death",5]
["positive regulation of cell development",3]
["positive regulation of cell differentiation",8]
["positive regulation of cell division",7]
["positive regulation of cell fate commitment",1]
["positive regulation of cell growth",7]
["positive regulation of cell migration",3]
["positive regulation of cell motility",3]
["positive regulation of cell population proliferation",16]
["positive regulation of cell projection organization",1]
["positive regulation of cell size",2]
["positive regulation of cell-substrate adhesion",1]
["positive regulation of cellular amide metabolic process",3]
["positive regulation of cellular biosynthetic process",51]
["positive regulation of cellular catabolic process",17]
["positive regulation of cellular component biogenesis",9]
["positive regulation of cellular component movement",4]
["positive regulation of cellular component organization",26]
["positive regulation of cellular metabolic process",98]
["positive regulation of cellular process",154]
["positive regulation of cellular protein catabolic process",8]
["positive regulation of cellular protein localization",7]
["positive regulation of cellular protein metabolic process",41]
["positive regulation of cellular response to alcohol",6]
["positive regulation of cellular response to drug",2]
["positive regulation of cellular response to heat",1]
["positive regulation of cellular response to oxidative stress",1]
["positive regulation of chemotaxis",1]
["positive regulation of chlorophyll biosynthetic process",1]
["positive regulation of chromatin organization",4]
["positive regulation of chromosome organization",8]
["positive regulation of chromosome segregation",3]
["positive regulation of chromosome separation",3]
["positive regulation of circadian rhythm",1]
["positive regulation of clathrin-dependent endocytosis",1]
["positive regulation of collagen biosynthetic process",1]
["positive regulation of collagen metabolic process",1]
["positive regulation of conidium formation",1]
["positive regulation of conjugation",1]
["positive regulation of conjugation with cellular fusion",1]
["positive regulation of cyclin-dependent protein kinase activity",2]
["positive regulation of cyclin-dependent protein serine/threonine kinase activity",2]
["positive regulation of cysteine-type endopeptidase activity",1]
["positive regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["positive regulation of cytochrome-c oxidase activity",1]
["positive regulation of cytokine production",3]
["positive regulation of cytokinesis",1]
["positive regulation of cytokinin-activated signaling pathway",2]
["positive regulation of cytoplasmic transport",3]
["positive regulation of cytoskeleton organization",5]
["positive regulation of cytosolic calcium ion concentration",1]
["positive regulation of defense response",19]
["positive regulation of defense response to bacterium",3]
["positive regulation of defense response to oomycetes",1]
["positive regulation of defense response to virus by host",1]
["positive regulation of dendrite extension",1]
["positive regulation of dense core granule transport",1]
["positive regulation of deoxyribonuclease activity",1]
["positive regulation of dephosphorylation",1]
["positive regulation of developmental growth",3]
["positive regulation of developmental process",21]
["positive regulation of DNA biosynthetic process",5]
["positive regulation of DNA endoreduplication",2]
["positive regulation of DNA metabolic process",10]
["positive regulation of DNA repair",2]
["positive regulation of DNA replication",2]
["positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["positive regulation of DNA-binding transcription factor activity",2]
["positive regulation of DNA-dependent DNA replication",2]
["positive regulation of DNA-directed DNA polymerase activity",4]
["positive regulation of DNA-templated transcription- elongation",3]
["positive regulation of DNA-templated transcription- initiation",1]
["positive regulation of early endosome to late endosome transport",2]
["positive regulation of electron transfer activity",1]
["positive regulation of embryonic development",1]
["positive regulation of endocytic recycling",1]
["positive regulation of endocytosis",4]
["positive regulation of endodeoxyribonuclease activity",1]
["positive regulation of endopeptidase activity",2]
["positive regulation of epidermal growth factor receptor signaling pathway",1]
["positive regulation of epidermal growth factor-activated receptor activity",1]
["positive regulation of epithelial to mesenchymal transition",1]
["positive regulation of ERBB signaling pathway",1]
["positive regulation of ERK1 and ERK2 cascade",1]
["positive regulation of establishment of protein localization",6]
["positive regulation of establishment of protein localization to mitochondrion",1]
["positive regulation of exocytosis",2]
["positive regulation of exosomal secretion",1]
["positive regulation of fibroblast growth factor receptor signaling pathway",1]
["positive regulation of fibroblast migration",1]
["positive regulation of fibroblast proliferation",1]
["positive regulation of filamentous growth",1]
["positive regulation of filamentous growth of a population of unicellular organisms",1]
["positive regulation of flavonoid biosynthetic process",1]
["positive regulation of flower development",4]
["positive regulation of G0 to G1 transition",1]
["positive regulation of G1/S transition of mitotic cell cycle",2]
["positive regulation of G2/M transition of mitotic cell cycle",4]
["positive regulation of gene expression",47]
["positive regulation of gene expression- epigenetic",6]
["positive regulation of gibberellic acid mediated signaling pathway",2]
["positive regulation of glial cell differentiation",1]
["positive regulation of gliogenesis",1]
["positive regulation of glycoprotein biosynthetic process",1]
["positive regulation of glycoprotein metabolic process",1]
["positive regulation of growth",10]
["positive regulation of growth of unicellular organism as a thread of attached cells",1]
["positive regulation of GTPase activity",11]
["positive regulation of hematopoietic progenitor cell differentiation",1]
["positive regulation of hemopoiesis",1]
["positive regulation of histone acetylation",1]
["positive regulation of histone H3-K27 methylation",1]
["positive regulation of histone H3-K27 trimethylation",1]
["positive regulation of histone H3-K4 methylation",1]
["positive regulation of histone methylation",3]
["positive regulation of histone modification",4]
["positive regulation of hydrolase activity",21]
["positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["positive regulation of I-kappaB kinase/NF-kappaB signaling",1]
["positive regulation of immune effector process",1]
["positive regulation of immune response",18]
["positive regulation of immune system process",20]
["positive regulation of innate immune response",16]
["positive regulation of insulin-like growth factor receptor signaling pathway",2]
["positive regulation of interleukin-1 production",1]
["positive regulation of interleukin-8 production",2]
["positive regulation of intracellular protein transport",5]
["positive regulation of intracellular signal transduction",12]
["positive regulation of intracellular transport",10]
["positive regulation of intrinsic apoptotic signaling pathway",1]
["positive regulation of invasive growth in response to glucose limitation",1]
["positive regulation of ion transmembrane transport",2]
["positive regulation of ion transmembrane transporter activity",2]
["positive regulation of ion transport",3]
["positive regulation of isomerase activity",1]
["positive regulation of isoprenoid metabolic process",2]
["positive regulation of kinase activity",17]
["positive regulation of lipase activity",3]
["positive regulation of lipid biosynthetic process",2]
["positive regulation of lipid catabolic process",1]
["positive regulation of lipid kinase activity",1]
["positive regulation of lipid localization",1]
["positive regulation of lipid metabolic process",4]
["positive regulation of lipid transport",1]
["positive regulation of lipophagy",2]
["positive regulation of locomotion",5]
["positive regulation of locomotion involved in locomotory behavior",1]
["positive regulation of long-day photoperiodism- flowering",3]
["positive regulation of lymphoid progenitor cell differentiation",1]
["positive regulation of Lys63-specific deubiquitinase activity",1]
["positive regulation of macroautophagy",2]
["positive regulation of macromolecule biosynthetic process",47]
["positive regulation of macromolecule metabolic process",95]
["positive regulation of macropinocytosis",1]
["positive regulation of MAP kinase activity",4]
["positive regulation of MAPK cascade",6]
["positive regulation of mating type switching",1]
["positive regulation of meiotic cell cycle",3]
["positive regulation of meiotic nuclear division",1]
["positive regulation of membrane permeability",1]
["positive regulation of membrane potential",1]
["positive regulation of metabolic process",111]
["positive regulation of metaphase/anaphase transition of cell cycle",3]
["positive regulation of microtubule nucleation",1]
["positive regulation of microtubule polymerization",1]
["positive regulation of microtubule polymerization or depolymerization",1]
["positive regulation of mitochondrial membrane permeability",1]
["positive regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["positive regulation of mitochondrial membrane potential",1]
["positive regulation of mitochondrial RNA catabolic process",1]
["positive regulation of mitochondrion organization",1]
["positive regulation of mitotic cell cycle",15]
["positive regulation of mitotic cell cycle phase transition",9]
["positive regulation of mitotic cell cycle spindle assembly checkpoint",2]
["positive regulation of mitotic cell cycle- embryonic",1]
["positive regulation of mitotic metaphase/anaphase transition",3]
["positive regulation of mitotic nuclear division",4]
["positive regulation of mitotic sister chromatid segregation",3]
["positive regulation of mitotic sister chromatid separation",3]
["positive regulation of molecular function",54]
["positive regulation of mRNA 3'-end processing",1]
["positive regulation of mRNA catabolic process",1]
["positive regulation of mRNA cleavage",1]
["positive regulation of mRNA metabolic process",3]
["positive regulation of mRNA polyadenylation",1]
["positive regulation of mRNA processing",2]
["positive regulation of mRNA splicing- via spliceosome",1]
["positive regulation of multi-organism process",9]
["positive regulation of multicellular organismal process",16]
["positive regulation of muscle cell differentiation",1]
["positive regulation of muscle contraction",1]
["positive regulation of myoblast fusion",1]
["positive regulation of myotube differentiation",1]
["positive regulation of NAD(P)H oxidase activity",1]
["positive regulation of nervous system development",2]
["positive regulation of neurogenesis",2]
["positive regulation of neuron apoptotic process",1]
["positive regulation of neuron death",1]
["positive regulation of neuron differentiation",1]
["positive regulation of neuron migration",1]
["positive regulation of neuron projection development",1]
["positive regulation of NF-kappaB transcription factor activity",1]
["positive regulation of NIK/NF-kappaB signaling",1]
["positive regulation of nitrogen compound metabolic process",85]
["positive regulation of nuclear division",5]
["positive regulation of nuclease activity",1]
["positive regulation of nucleic acid-templated transcription",38]
["positive regulation of nucleobase-containing compound metabolic process",54]
["positive regulation of nucleobase-containing compound transport",1]
["positive regulation of nucleocytoplasmic transport",3]
["positive regulation of nucleotide biosynthetic process",1]
["positive regulation of nucleotide metabolic process",1]
["positive regulation of oligodendrocyte differentiation",1]
["positive regulation of organelle organization",18]
["positive regulation of oviposition",1]
["positive regulation of oxidative phosphorylation",1]
["positive regulation of oxidative stress-induced cell death",1]
["positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidative stress-induced neuron death",1]
["positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidoreductase activity",3]
["positive regulation of pathway-restricted SMAD protein phosphorylation",1]
["positive regulation of peptidase activity",2]
["positive regulation of peptide secretion",1]
["positive regulation of peptidyl-lysine acetylation",1]
["positive regulation of peptidyl-serine phosphorylation",1]
["positive regulation of peptidyl-threonine phosphorylation",3]
["positive regulation of peptidyl-tyrosine phosphorylation",2]
["positive regulation of phosphate metabolic process",25]
["positive regulation of phosphatidylinositol 3-kinase activity",1]
["positive regulation of phospholipase A2 activity",1]
["positive regulation of phospholipase activity",3]
["positive regulation of phospholipase C activity",1]
["positive regulation of phospholipid metabolic process",1]
["positive regulation of phospholipid translocation",1]
["positive regulation of phospholipid transport",1]
["positive regulation of phosphorus metabolic process",25]
["positive regulation of phosphorylation",24]
["positive regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["positive regulation of photomorphogenesis",1]
["positive regulation of phytol biosynthetic process",1]
["positive regulation of pinocytosis",1]
["positive regulation of plant-type hypersensitive response",2]
["positive regulation of post-embryonic development",9]
["positive regulation of posttranscriptional gene silencing",1]
["positive regulation of pro-B cell differentiation",1]
["positive regulation of production of siRNA involved in RNA interference",1]
["positive regulation of programmed cell death",5]
["positive regulation of proteasomal protein catabolic process",7]
["positive regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["positive regulation of protein acetylation",1]
["positive regulation of protein catabolic process",10]
["positive regulation of protein dephosphorylation",1]
["positive regulation of protein deubiquitination",1]
["positive regulation of protein exit from endoplasmic reticulum",2]
["positive regulation of protein export from nucleus",1]
["positive regulation of protein geranylgeranylation",2]
["positive regulation of protein glycosylation",1]
["positive regulation of protein glycosylation in Golgi",1]
["positive regulation of protein import",1]
["positive regulation of protein import into nucleus",1]
["positive regulation of protein K63-linked deubiquitination",1]
["positive regulation of protein kinase activity",16]
["positive regulation of protein localization to cell surface",2]
["positive regulation of protein localization to kinetochore",1]
["positive regulation of protein localization to nucleus",2]
["positive regulation of protein metabolic process",43]
["positive regulation of protein modification by small protein conjugation or removal",3]
["positive regulation of protein modification process",31]
["positive regulation of protein phosphorylation",22]
["positive regulation of protein polymerization",5]
["positive regulation of protein secretion",1]
["positive regulation of protein serine/threonine kinase activity",8]
["positive regulation of protein targeting to mitochondrion",1]
["positive regulation of protein transport",6]
["positive regulation of protein tyrosine kinase activity",1]
["positive regulation of protein ubiquitination",2]
["positive regulation of protein-containing complex assembly",7]
["positive regulation of proteolysis",9]
["positive regulation of proteolysis involved in cellular protein catabolic process",7]
["positive regulation of purine nucleotide biosynthetic process",1]
["positive regulation of purine nucleotide metabolic process",1]
["positive regulation of reactive oxygen species metabolic process",1]
["positive regulation of receptor internalization",3]
["positive regulation of receptor signaling pathway via JAK-STAT",1]
["positive regulation of receptor signaling pathway via STAT",1]
["positive regulation of receptor-mediated endocytosis",3]
["positive regulation of red or far-red light signaling pathway",1]
["positive regulation of reproductive process",13]
["positive regulation of response to alcohol",6]
["positive regulation of response to biotic stimulus",4]
["positive regulation of response to DNA damage stimulus",2]
["positive regulation of response to drug",2]
["positive regulation of response to external stimulus",5]
["positive regulation of response to oxidative stress",2]
["positive regulation of response to salt stress",3]
["positive regulation of response to stimulus",64]
["positive regulation of response to water deprivation",4]
["positive regulation of response to wounding",1]
["positive regulation of ribosome biogenesis",1]
["positive regulation of RNA biosynthetic process",38]
["positive regulation of RNA export from nucleus",1]
["positive regulation of RNA interference",1]
["positive regulation of RNA metabolic process",44]
["positive regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["positive regulation of RNA splicing",1]
["positive regulation of rRNA processing",1]
["positive regulation of salicylic acid mediated signaling pathway",2]
["positive regulation of secondary metabolite biosynthetic process",2]
["positive regulation of secretion",3]
["positive regulation of secretion by cell",3]
["positive regulation of seed germination",1]
["positive regulation of shade avoidance",1]
["positive regulation of short-day photoperiodism- flowering",1]
["positive regulation of signal transduction",30]
["positive regulation of signal transduction by p53 class mediator",1]
["positive regulation of signaling",31]
["positive regulation of signaling receptor activity",1]
["positive regulation of single-species biofilm formation",1]
["positive regulation of small molecule metabolic process",2]
["positive regulation of smooth muscle cell proliferation",1]
["positive regulation of smooth muscle contraction",1]
["positive regulation of smoothened signaling pathway",1]
["positive regulation of spindle checkpoint",2]
["positive regulation of sporulation",1]
["positive regulation of stem cell differentiation",2]
["positive regulation of sterigmatocystin biosynthetic process",1]
["positive regulation of stress-activated MAPK cascade",1]
["positive regulation of stress-activated protein kinase signaling cascade",1]
["positive regulation of striated muscle cell differentiation",1]
["positive regulation of supramolecular fiber organization",5]
["positive regulation of synaptic transmission",1]
["positive regulation of synaptic vesicle recycling",1]
["positive regulation of syncytium formation by plasma membrane fusion",1]
["positive regulation of syringal lignin biosynthetic process",1]
["positive regulation of systemic acquired resistance",2]
["positive regulation of telomerase activity",1]
["positive regulation of telomere maintenance",1]
["positive regulation of telomere maintenance via telomerase",1]
["positive regulation of telomere maintenance via telomere lengthening",1]
["positive regulation of tetrapyrrole biosynthetic process",1]
["positive regulation of tetrapyrrole metabolic process",1]
["positive regulation of TOR signaling",2]
["positive regulation of TORC1 signaling",1]
["positive regulation of transcription by RNA polymerase I",1]
["positive regulation of transcription by RNA polymerase II",12]
["positive regulation of transcription by transcription factor localization",1]
["positive regulation of transcription elongation from RNA polymerase II promoter",3]
["positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation",1]
["positive regulation of transcription from RNA polymerase II promoter in response to stress",1]
["positive regulation of transcription initiation from RNA polymerase II promoter",1]
["positive regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["positive regulation of transcription- DNA-templated",34]
["positive regulation of transferase activity",22]
["positive regulation of translation",3]
["positive regulation of translational initiation",1]
["positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",1]
["positive regulation of transmembrane transport",2]
["positive regulation of transport",18]
["positive regulation of transporter activity",2]
["positive regulation of triglyceride catabolic process",1]
["positive regulation of triglyceride metabolic process",1]
["positive regulation of tumor necrosis factor production",1]
["positive regulation of tumor necrosis factor superfamily cytokine production",1]
["positive regulation of tyrosine phosphorylation of STAT protein",1]
["positive regulation of ubiquitin-dependent protein catabolic process",5]
["positive regulation of ubiquitin-protein transferase activity",1]
["positive regulation of ubiquitin-specific protease activity",1]
["positive regulation of unidimensional cell growth",1]
["positive regulation of urease activity",2]
["positive regulation of vacuole fusion- non-autophagic",1]
["positive regulation of vacuole organization",2]
["positive regulation of vasculature development",1]
["positive regulation of vernalization response",1]
["positive regulation of viral genome replication",1]
["positive regulation of viral life cycle",1]
["positive regulation of viral process",3]
["positive regulation of vitamin E biosynthetic process",1]
["positive regulation of vitamin metabolic process",1]
["positive regulation of Wnt signaling pathway",1]
["positive regulation of wound healing",1]
["post-embryonic animal morphogenesis",2]
["post-embryonic animal organ development",2]
["post-embryonic animal organ morphogenesis",1]
["post-embryonic development",202]
["post-embryonic plant morphogenesis",29]
["post-embryonic plant organ development",33]
["post-embryonic plant organ morphogenesis",21]
["post-embryonic root development",25]
["post-embryonic root morphogenesis",13]
["post-Golgi vesicle-mediated transport",7]
["post-lysosomal vacuole",1]
["post-mRNA release spliceosomal complex",1]
["post-transcriptional gene silencing by RNA",12]
["post-translational protein modification",8]
["postreplication repair",9]
["postsynapse",3]
["postsynaptic membrane",3]
["posttranscriptional gene silencing",13]
["posttranscriptional regulation of gene expression",41]
["posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery",1]
["posttranslational protein targeting to endoplasmic reticulum membrane",3]
["posttranslational protein targeting to membrane- translocation",2]
["potassium channel activity",5]
["potassium ion antiporter activity",2]
["potassium ion binding",1]
["potassium ion homeostasis",2]
["potassium ion leak channel activity",1]
["potassium ion transmembrane transport",10]
["potassium ion transmembrane transporter activity",10]
["potassium ion transport",20]
["potassium ion-transporting ATPase complex",1]
["potassium:proton antiporter activity",2]
["pre-miRNA binding",1]
["pre-mRNA 3'-splice site binding",3]
["pre-mRNA binding",3]
["pre-mRNA cleavage required for polyadenylation",2]
["pre-replicative complex",3]
["pre-replicative complex assembly",3]
["pre-replicative complex assembly involved in cell cycle DNA replication",3]
["pre-replicative complex assembly involved in nuclear cell cycle DNA replication",3]
["preassembly of GPI anchor in ER membrane",1]
["precatalytic spliceosome",8]
["prefoldin complex",1]
["prenylated protein catabolic process",1]
["prenylation",2]
["prenylcysteine catabolic process",1]
["prenylcysteine metabolic process",1]
["prenylcysteine methylesterase activity",1]
["prenylcysteine oxidase activity",1]
["prenyltransferase activity",9]
["preprophase band",1]
["preprophase band assembly",1]
["preprotein binding",1]
["preribosome",20]
["preribosome- large subunit precursor",8]
["preribosome- small subunit precursor",1]
["prespliceosome",6]
["presynapse",3]
["prevention of polyspermy",1]
["primary active transmembrane transporter activity",28]
["primary alcohol metabolic process",2]
["primary cell septum",1]
["primary cell septum disassembly",1]
["primary lysosome",1]
["primary meristem tissue development",3]
["primary metabolic process",1036]
["primary miRNA binding",1]
["primary miRNA processing",2]
["primary palate development",1]
["primary root development",4]
["primary shoot apical meristem specification",2]
["procambium histogenesis",1]
["process utilizing autophagic mechanism",21]
["procollagen-proline 4-dioxygenase activity",1]
["procollagen-proline dioxygenase activity",1]
["production of miRNAs involved in gene silencing by miRNA",6]
["production of molecular mediator of immune response",1]
["production of siRNA involved in chromatin silencing by small RNA",1]
["production of siRNA involved in RNA interference",4]
["production of small RNA involved in gene silencing by RNA",8]
["production of ta-siRNAs involved in RNA interference",2]
["profilin binding",1]
["programmed cell death",19]
["programmed cell death in response to reactive oxygen species",3]
["programmed cell death induced by symbiont",4]
["programmed cell death involved in cell development",3]
["progressive alteration of chromatin involved in cell aging",1]
["proline biosynthetic process",1]
["proline catabolic process",1]
["proline catabolic process to glutamate",1]
["proline metabolic process",3]
["proline-rich region binding",1]
["proline-tRNA ligase activity",1]
["prolyl-tRNA aminoacylation",1]
["promoter-specific chromatin binding",3]
["prospore membrane",1]
["prostaglandin biosynthetic process",1]
["prostaglandin metabolic process",2]
["prostanoid biosynthetic process",1]
["prostanoid metabolic process",2]
["prostate gland development",1]
["prostate gland growth",1]
["prosthetic group metabolic process",2]
["protease binding",5]
["proteasomal protein catabolic process",35]
["proteasome accessory complex",7]
["proteasome assembly",7]
["proteasome binding",2]
["proteasome complex",20]
["proteasome core complex",8]
["proteasome core complex- alpha-subunit complex",3]
["proteasome core complex- beta-subunit complex",5]
["proteasome regulatory particle",7]
["proteasome regulatory particle assembly",2]
["proteasome regulatory particle- base subcomplex",2]
["proteasome regulatory particle- lid subcomplex",5]
["proteasome-activating activity",1]
["proteasome-mediated ubiquitin-dependent protein catabolic process",31]
["protection from non-homologous end joining at telomere",2]
["protein acetylation",8]
["protein acetyltransferase complex",4]
["protein acylation",9]
["protein alkylation",22]
["protein autophosphorylation",30]
["protein autosumoylation",1]
["protein autoubiquitination",4]
["protein binding",304]
["protein biotinylation",1]
["protein C-terminal methylesterase activity",1]
["protein C-terminus binding",2]
["protein catabolic process",79]
["protein complex oligomerization",24]
["protein deacetylase activity",1]
["protein deacetylation",3]
["protein deacylation",4]
["protein dealkylation",3]
["protein deglycosylation",3]
["protein delipidation",1]
["protein demethylation",3]
["protein denaturation",1]
["protein deneddylation",6]
["protein depalmitoylation",1]
["protein dephosphorylation",16]
["protein depolymerization",2]
["protein destabilization",2]
["protein deubiquitination",4]
["protein dimerization activity",44]
["protein disulfide isomerase activity",9]
["protein domain specific binding",26]
["protein exit from endoplasmic reticulum",3]
["protein export from nucleus",20]
["protein farnesylation",1]
["protein farnesyltransferase activity",1]
["protein farnesyltransferase complex",1]
["protein folding",35]
["protein folding chaperone",10]
["protein folding in endoplasmic reticulum",3]
["protein geranylgeranylation",1]
["protein geranylgeranyltransferase activity",1]
["protein glutathionylation",2]
["protein glycosylation",34]
["protein glycosylation in endoplasmic reticulum",1]
["protein heterodimerization activity",8]
["protein heterooligomerization",3]
["protein heterotetramerization",2]
["protein heterotrimerization",1]
["protein hexamerization",5]
["protein histidine kinase activity",3]
["protein histidine kinase binding",3]
["protein homodimerization activity",38]
["protein homooligomerization",14]
["protein homotetramerization",4]
["protein homotrimerization",1]
["protein hydroxylation",1]
["protein import",30]
["protein import into chloroplast stroma",6]
["protein import into mitochondrial intermembrane space",1]
["protein import into mitochondrial matrix",5]
["protein import into nucleus",14]
["protein import into peroxisome matrix",3]
["protein import into peroxisome matrix- docking",1]
["protein insertion into ER membrane",2]
["protein insertion into membrane",2]
["protein insertion into mitochondrial outer membrane",1]
["protein K48-linked ubiquitination",1]
["protein K63-linked ubiquitination",1]
["protein K69-linked ufmylation",1]
["protein kinase A binding",2]
["protein kinase A catalytic subunit binding",1]
["protein kinase A regulatory subunit binding",1]
["protein kinase activator activity",2]
["protein kinase activity",76]
["protein kinase binding",10]
["protein kinase complex",8]
["protein kinase regulator activity",6]
["protein lipidation",10]
["protein lipoylation",3]
["protein localization",113]
["protein localization to basolateral plasma membrane",1]
["protein localization to cell periphery",4]
["protein localization to chloroplast",9]
["protein localization to chromosome",1]
["protein localization to chromosome- centromeric region",1]
["protein localization to ciliary membrane",1]
["protein localization to cilium",2]
["protein localization to cytoskeleton",1]
["protein localization to endoplasmic reticulum",5]
["protein localization to Golgi apparatus",1]
["protein localization to Golgi membrane",1]
["protein localization to kinetochore",1]
["protein localization to lysosome",3]
["protein localization to meiotic spindle",1]
["protein localization to meiotic spindle midzone",1]
["protein localization to membrane",16]
["protein localization to microtubule cytoskeleton",1]
["protein localization to mitochondrion",8]
["protein localization to non-motile cilium",1]
["protein localization to nuclear envelope",2]
["protein localization to nuclear inner membrane",2]
["protein localization to nucleus",17]
["protein localization to organelle",62]
["protein localization to peroxisome",5]
["protein localization to phagophore assembly site",4]
["protein localization to plasma membrane",2]
["protein localization to trailing edge",1]
["protein localization to uropod",1]
["protein localization to vacuole",13]
["protein maturation",12]
["protein metabolic process",427]
["protein methylation",22]
["protein methylesterase activity",2]
["protein methyltransferase activity",14]
["protein modification by small protein conjugation",65]
["protein modification by small protein conjugation or removal",74]
["protein modification by small protein removal",10]
["protein modification process",287]
["protein monoubiquitination",3]
["protein myristoylation",1]
["protein N-acetylglucosaminyltransferase activity",1]
["protein N-linked glycosylation",23]
["protein N-linked glycosylation via asparagine",8]
["protein neddylation",2]
["protein O-linked fucosylation",1]
["protein O-linked glycosylation",6]
["protein O-linked glycosylation via hydroxyproline",4]
["protein peptidyl-prolyl isomerization",17]
["protein phosphatase 2A binding",3]
["protein phosphatase 2B binding",1]
["protein phosphatase binding",5]
["protein phosphatase inhibitor activity",3]
["protein phosphatase regulator activity",8]
["protein phosphatase type 2A complex",2]
["protein phosphorylated amino acid binding",2]
["protein phosphorylation",83]
["protein polymerization",4]
["protein polyubiquitination",18]
["protein polyufmylation",1]
["protein prenylation",2]
["protein prenyltransferase activity",2]
["protein processing",6]
["protein quality control for misfolded or incompletely synthesized proteins",6]
["protein refolding",1]
["protein repair",3]
["protein retention in ER lumen",1]
["protein secretion",1]
["protein self-association",19]
["protein serine/threonine kinase activator activity",1]
["protein serine/threonine kinase activity",61]
["protein serine/threonine phosphatase activity",6]
["protein serine/threonine phosphatase complex",2]
["protein serine/threonine phosphatase inhibitor activity",1]
["protein serine/threonine/tyrosine kinase activity",7]
["protein stabilization",4]
["protein storage vacuole",2]
["protein storage vacuole organization",2]
["protein sumoylation",5]
["protein targeting",39]
["protein targeting to chloroplast",9]
["protein targeting to ER",4]
["protein targeting to lysosome",3]
["protein targeting to membrane",7]
["protein targeting to mitochondrion",8]
["protein targeting to peroxisome",5]
["protein targeting to vacuole",9]
["protein tetramerization",8]
["protein to membrane docking",1]
["protein transmembrane import into intracellular organelle",9]
["protein transmembrane transport",20]
["protein transmembrane transporter activity",6]
["protein transport",96]
["protein transport by the Tat complex",1]
["protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",3]
["protein trimerization",3]
["protein tyrosine kinase activity",2]
["protein tyrosine phosphatase activity",5]
["protein tyrosine/serine/threonine phosphatase activity",1]
["protein tyrosine/threonine phosphatase activity",2]
["protein ubiquitination",56]
["protein ufmylation",1]
["protein unfolding",2]
["protein-arginine N-methyltransferase activity",6]
["protein-arginine N5-methyltransferase activity",1]
["protein-arginine omega-N asymmetric methyltransferase activity",4]
["protein-arginine omega-N monomethyltransferase activity",3]
["protein-containing complex",448]
["protein-containing complex assembly",118]
["protein-containing complex binding",40]
["protein-containing complex disassembly",14]
["protein-containing complex localization",26]
["protein-containing complex subunit organization",135]
["protein-cysteine S-palmitoyltransferase complex",2]
["protein-disulfide reductase (NAD(P)) activity",2]
["protein-disulfide reductase activity",5]
["protein-DNA complex",8]
["protein-DNA complex assembly",19]
["protein-DNA complex disassembly",2]
["protein-DNA complex subunit organization",24]
["protein-lysine N-methyltransferase activity",8]
["protein-macromolecule adaptor activity",3]
["protein-membrane adaptor activity",1]
["protein-tyrosine sulfotransferase activity",1]
["proteoglycan biosynthetic process",1]
["proteoglycan metabolic process",5]
["proteolysis",116]
["proteolysis involved in cellular protein catabolic process",67]
["protoderm histogenesis",2]
["proton motive force dependent protein transmembrane transporter activity",1]
["proton transmembrane transport",12]
["proton transmembrane transporter activity",11]
["proton-transporting ATP synthase complex",1]
["proton-transporting ATP synthase complex assembly",3]
["proton-transporting ATPase activity- rotational mechanism",3]
["proton-transporting two-sector ATPase complex",3]
["proton-transporting two-sector ATPase complex assembly",3]
["proton-transporting two-sector ATPase complex- catalytic domain",1]
["proton-transporting V-type ATPase complex",2]
["proton-transporting V-type ATPase- V1 domain",1]
["protoporphyrinogen IX biosynthetic process",1]
["protoporphyrinogen IX metabolic process",1]
["protoporphyrinogen oxidase activity",1]
["Prp19 complex",3]
["pseudopodium assembly",1]
["pseudopodium organization",1]
["pseudouridine synthase activity",9]
["pseudouridine synthesis",10]
["PSII associated light-harvesting complex II",1]
["PSII associated light-harvesting complex II catabolic process",3]
["pteridine-containing compound biosynthetic process",4]
["pteridine-containing compound metabolic process",5]
["pullulanase activity",1]
["purine nucleobase biosynthetic process",2]
["purine nucleobase catabolic process",4]
["purine nucleobase metabolic process",7]
["purine nucleobase salvage",1]
["purine nucleobase transmembrane transport",1]
["purine nucleobase transmembrane transporter activity",1]
["purine nucleobase transport",1]
["purine nucleosidase activity",1]
["purine nucleoside binding",15]
["purine nucleoside biosynthetic process",3]
["purine nucleoside bisphosphate biosynthetic process",4]
["purine nucleoside bisphosphate catabolic process",1]
["purine nucleoside bisphosphate metabolic process",9]
["purine nucleoside diphosphate biosynthetic process",1]
["purine nucleoside diphosphate metabolic process",11]
["purine nucleoside metabolic process",6]
["purine nucleoside monophosphate biosynthetic process",14]
["purine nucleoside monophosphate metabolic process",22]
["purine nucleoside triphosphate biosynthetic process",13]
["purine nucleoside triphosphate metabolic process",21]
["purine nucleotide binding",57]
["purine nucleotide biosynthetic process",22]
["purine nucleotide catabolic process",1]
["purine nucleotide metabolic process",35]
["purine nucleotide transmembrane transporter activity",8]
["purine nucleotide transport",9]
["purine nucleotide-sugar transmembrane transport",5]
["purine nucleotide-sugar transmembrane transporter activity",3]
["purine ribonucleoside binding",15]
["purine ribonucleoside biosynthetic process",3]
["purine ribonucleoside bisphosphate metabolic process",1]
["purine ribonucleoside diphosphate biosynthetic process",1]
["purine ribonucleoside diphosphate metabolic process",11]
["purine ribonucleoside metabolic process",6]
["purine ribonucleoside monophosphate biosynthetic process",14]
["purine ribonucleoside monophosphate metabolic process",22]
["purine ribonucleoside triphosphate binding",54]
["purine ribonucleoside triphosphate biosynthetic process",13]
["purine ribonucleoside triphosphate metabolic process",21]
["purine ribonucleotide binding",57]
["purine ribonucleotide biosynthetic process",21]
["purine ribonucleotide catabolic process",1]
["purine ribonucleotide metabolic process",34]
["purine ribonucleotide transmembrane transporter activity",8]
["purine ribonucleotide transport",9]
["purine-containing compound biosynthetic process",24]
["purine-containing compound catabolic process",5]
["purine-containing compound metabolic process",43]
["purine-containing compound salvage",2]
["purine-containing compound transmembrane transport",4]
["putrescine binding",1]
["putrescine biosynthetic process",3]
["putrescine biosynthetic process from arginine",1]
["putrescine biosynthetic process from arginine- using agmatinase",1]
["putrescine metabolic process",3]
["putrescine transport",1]
["Pwp2p-containing subcomplex of 90S preribosome",2]
["pyridine nucleotide biosynthetic process",15]
["pyridine nucleotide metabolic process",24]
["pyridine nucleotide salvage",1]
["pyridine-containing compound biosynthetic process",17]
["pyridine-containing compound catabolic process",1]
["pyridine-containing compound metabolic process",26]
["pyridoxal 5'-phosphate salvage",2]
["pyridoxal biosynthetic process",1]
["pyridoxal kinase activity",1]
["pyridoxal metabolic process",1]
["pyridoxal phosphate binding",7]
["pyridoxal phosphate biosynthetic process",3]
["pyridoxal phosphate metabolic process",3]
["pyridoxamine-phosphate oxidase activity",1]
["pyridoxine biosynthetic process",1]
["pyridoxine metabolic process",1]
["pyridoxine:NADP 4-dehydrogenase activity",1]
["pyrimidine deoxyribonucleoside metabolic process",1]
["pyrimidine deoxyribonucleotide catabolic process",1]
["pyrimidine deoxyribonucleotide metabolic process",1]
["pyrimidine dimer repair",3]
["pyrimidine dimer repair by nucleotide-excision repair",1]
["pyrimidine nucleobase biosynthetic process",2]
["pyrimidine nucleobase catabolic process",3]
["pyrimidine nucleobase metabolic process",9]
["pyrimidine nucleobase salvage",1]
["pyrimidine nucleoside biosynthetic process",4]
["pyrimidine nucleoside catabolic process",1]
["pyrimidine nucleoside metabolic process",7]
["pyrimidine nucleoside monophosphate biosynthetic process",3]
["pyrimidine nucleoside monophosphate metabolic process",3]
["pyrimidine nucleoside salvage",4]
["pyrimidine nucleotide biosynthetic process",7]
["pyrimidine nucleotide catabolic process",1]
["pyrimidine nucleotide metabolic process",10]
["pyrimidine nucleotide-sugar transmembrane transport",6]
["pyrimidine nucleotide-sugar transmembrane transporter activity",6]
["pyrimidine ribonucleoside biosynthetic process",3]
["pyrimidine ribonucleoside catabolic process",1]
["pyrimidine ribonucleoside metabolic process",5]
["pyrimidine ribonucleoside monophosphate biosynthetic process",3]
["pyrimidine ribonucleoside monophosphate metabolic process",3]
["pyrimidine ribonucleotide biosynthetic process",6]
["pyrimidine ribonucleotide metabolic process",6]
["pyrimidine-containing compound biosynthetic process",15]
["pyrimidine-containing compound catabolic process",5]
["pyrimidine-containing compound metabolic process",22]
["pyrimidine-containing compound salvage",7]
["pyrophosphatase activity",149]
["pyruvate biosynthetic process",11]
["pyruvate dehydrogenase (acetyl-transferring) kinase activity",1]
["pyruvate family amino acid catabolic process",1]
["pyruvate family amino acid metabolic process",2]
["pyruvate kinase activity",3]
["pyruvate metabolic process",18]
["pyruvate transmembrane transport",2]
["pyruvate transmembrane transporter activity",2]
["pyruvate transport",2]
["quaternary ammonium group transmembrane transporter activity",1]
["quaternary ammonium group transport",1]
["queuine tRNA-ribosyltransferase activity",1]
["queuosine biosynthetic process",1]
["queuosine metabolic process",1]
["quiescent center organization",1]
["quinolinate catabolic process",1]
["quinolinate metabolic process",1]
["quinone binding",1]
["quinone biosynthetic process",4]
["quinone metabolic process",4]
["Rab GDP-dissociation inhibitor activity",1]
["Rab geranylgeranyltransferase activity",1]
["Rab protein signal transduction",1]
["Rab-protein geranylgeranyltransferase complex",2]
["racemase activity- acting on amino acids and derivatives",1]
["racemase and epimerase activity",9]
["racemase and epimerase activity- acting on amino acids and derivatives",2]
["racemase and epimerase activity- acting on carbohydrates and derivatives",3]
["racemase and epimerase activity- acting on hydroxy acids and derivatives",2]
["Rad51B-Rad51C-Rad51D-XRCC2 complex",1]
["radial axis specification",1]
["radial pattern formation",3]
["radial spoke",1]
["Ran protein signal transduction",1]
["Ras protein signal transduction",3]
["rDNA binding",1]
["rDNA protrusion",1]
["reactive nitrogen species metabolic process",2]
["reactive oxygen species biosynthetic process",6]
["reactive oxygen species metabolic process",22]
["receptor catabolic process",1]
["receptor internalization",1]
["receptor internalization involved in canonical Wnt signaling pathway",1]
["receptor ligand activity",1]
["receptor localization to non-motile cilium",1]
["receptor metabolic process",2]
["receptor serine/threonine kinase binding",2]
["receptor-mediated endocytosis",4]
["reciprocal meiotic recombination",15]
["recognition of pollen",2]
["recombinational repair",17]
["recycling endosome",3]
["recycling endosome membrane",1]
["red or far-red light signaling pathway",3]
["red- far-red light phototransduction",1]
["reductive pentose-phosphate cycle",4]
["regeneration",1]
["regionalization",26]
["regulated exocytosis",4]
["regulation of abscisic acid-activated signaling pathway",14]
["regulation of actin cytoskeleton organization",8]
["regulation of actin filament depolymerization",1]
["regulation of actin filament length",5]
["regulation of actin filament organization",5]
["regulation of actin filament polymerization",5]
["regulation of actin filament-based process",8]
["regulation of actin nucleation",1]
["regulation of actin polymerization or depolymerization",5]
["regulation of activin receptor signaling pathway",1]
["regulation of actomyosin contractile ring contraction",1]
["regulation of actomyosin structure organization",2]
["regulation of adaxial/abaxial pattern formation",1]
["regulation of adenylate cyclase activity",2]
["regulation of aerobic respiration",1]
["regulation of aggregate size involved in sorocarp development",1]
["regulation of aggregation involved in sorocarp development",1]
["regulation of alcohol biosynthetic process",4]
["regulation of alternative mRNA splicing- via spliceosome",4]
["regulation of anatomical structure morphogenesis",28]
["regulation of anatomical structure size",18]
["regulation of androgen receptor signaling pathway",1]
["regulation of angiogenesis",2]
["regulation of animal organ morphogenesis",3]
["regulation of anion channel activity",1]
["regulation of anion transmembrane transport",1]
["regulation of anion transport",3]
["regulation of anoikis",1]
["regulation of anthocyanin biosynthetic process",2]
["regulation of anthocyanin metabolic process",5]
["regulation of antifungal innate immune response",1]
["regulation of antisense RNA transcription",1]
["regulation of apoptotic process",16]
["regulation of apoptotic process involved in development",1]
["regulation of apoptotic signaling pathway",3]
["regulation of arginine biosynthetic process",1]
["regulation of arginine biosynthetic process via ornithine",1]
["regulation of arginine metabolic process",1]
["regulation of asexual reproduction",2]
["regulation of asexual sporulation",1]
["regulation of ATP biosynthetic process",3]
["regulation of ATP metabolic process",3]
["regulation of ATPase activity",2]
["regulation of attachment of spindle microtubules to kinetochore",1]
["regulation of autophagosome assembly",2]
["regulation of autophagy",14]
["regulation of autophagy of mitochondrion",1]
["regulation of auxin biosynthetic process",1]
["regulation of auxin mediated signaling pathway",8]
["regulation of auxin metabolic process",2]
["regulation of auxin polar transport",3]
["regulation of behavior",2]
["regulation of beta-glucan biosynthetic process",2]
["regulation of beta-glucan metabolic process",2]
["regulation of binding",2]
["regulation of biological process",595]
["regulation of biological process involved in symbiotic interaction",5]
["regulation of biological quality",172]
["regulation of biosynthetic process",194]
["regulation of blood circulation",1]
["regulation of blood vessel endothelial cell migration",1]
["regulation of BMP signaling pathway",1]
["regulation of body fluid levels",4]
["regulation of bone development",1]
["regulation of brassinosteroid mediated signaling pathway",3]
["regulation of calcium ion transmembrane transport",1]
["regulation of calcium ion transport",2]
["regulation of calcium ion transport into cytosol",1]
["regulation of canonical Wnt signaling pathway",6]
["regulation of carbohydrate biosynthetic process",6]
["regulation of carbohydrate catabolic process",2]
["regulation of carbohydrate metabolic process",9]
["regulation of carbon utilization",1]
["regulation of cardiac muscle cell apoptotic process",1]
["regulation of cardiac muscle cell proliferation",1]
["regulation of cardiac muscle contraction",1]
["regulation of cardiac muscle contraction by calcium ion signaling",1]
["regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion",1]
["regulation of cardiac muscle tissue development",1]
["regulation of cardiac muscle tissue growth",1]
["regulation of catabolic process",37]
["regulation of catalytic activity",85]
["regulation of cation transmembrane transport",3]
["regulation of cell activation",1]
["regulation of cell adhesion",1]
["regulation of cell adhesion involved in single-species biofilm formation",1]
["regulation of cell aging",1]
["regulation of cell communication",92]
["regulation of cell cycle",73]
["regulation of cell cycle checkpoint",3]
["regulation of cell cycle G1/S phase transition",4]
["regulation of cell cycle G2/M phase transition",8]
["regulation of cell cycle phase transition",24]
["regulation of cell cycle process",44]
["regulation of cell death",31]
["regulation of cell development",8]
["regulation of cell diameter",1]
["regulation of cell differentiation",19]
["regulation of cell division",16]
["regulation of cell fate commitment",1]
["regulation of cell growth",14]
["regulation of cell migration",5]
["regulation of cell migration involved in sprouting angiogenesis",1]
["regulation of cell morphogenesis",9]
["regulation of cell morphogenesis involved in differentiation",1]
["regulation of cell motility",6]
["regulation of cell population proliferation",25]
["regulation of cell projection assembly",3]
["regulation of cell projection organization",6]
["regulation of cell septum assembly",1]
["regulation of cell shape",4]
["regulation of cell size",9]
["regulation of cell wall macromolecule metabolic process",2]
["regulation of cell wall organization or biogenesis",3]
["regulation of cell-substrate adhesion",1]
["regulation of cellular amide metabolic process",20]
["regulation of cellular amine metabolic process",4]
["regulation of cellular amino acid biosynthetic process",1]
["regulation of cellular amino acid metabolic process",4]
["regulation of cellular biosynthetic process",187]
["regulation of cellular carbohydrate metabolic process",6]
["regulation of cellular catabolic process",35]
["regulation of cellular component biogenesis",31]
["regulation of cellular component movement",8]
["regulation of cellular component organization",104]
["regulation of cellular component size",18]
["regulation of cellular ketone metabolic process",8]
["regulation of cellular localization",20]
["regulation of cellular macromolecule biosynthetic process",172]
["regulation of cellular metabolic process",287]
["regulation of cellular pH",6]
["regulation of cellular process",517]
["regulation of cellular protein catabolic process",9]
["regulation of cellular protein localization",12]
["regulation of cellular protein metabolic process",84]
["regulation of cellular respiration",1]
["regulation of cellular response to alcohol",14]
["regulation of cellular response to drug",4]
["regulation of cellular response to growth factor stimulus",2]
["regulation of cellular response to heat",2]
["regulation of cellular response to insulin stimulus",1]
["regulation of cellular response to oxidative stress",1]
["regulation of cellular response to stress",23]
["regulation of cellular response to transforming growth factor beta stimulus",1]
["regulation of cellular senescence",1]
["regulation of cellulose biosynthetic process",2]
["regulation of centromere complex assembly",1]
["regulation of chemotaxis",1]
["regulation of chlorophyll biosynthetic process",3]
["regulation of chlorophyll metabolic process",3]
["regulation of cholesterol biosynthetic process",2]
["regulation of cholesterol metabolic process",2]
["regulation of chromatin assembly",1]
["regulation of chromatin assembly or disassembly",1]
["regulation of chromatin organization",19]
["regulation of chromatin silencing",10]
["regulation of chromatin silencing at telomere",2]
["regulation of chromosome organization",36]
["regulation of chromosome segregation",13]
["regulation of chromosome separation",12]
["regulation of cilium assembly",1]
["regulation of cilium beat frequency",1]
["regulation of cilium movement",1]
["regulation of circadian rhythm",6]
["regulation of clathrin-dependent endocytosis",1]
["regulation of collagen biosynthetic process",1]
["regulation of collagen metabolic process",1]
["regulation of conidium formation",1]
["regulation of conjugation",1]
["regulation of conjugation with cellular fusion",1]
["regulation of cyclase activity",3]
["regulation of cyclin-dependent protein kinase activity",4]
["regulation of cyclin-dependent protein serine/threonine kinase activity",4]
["regulation of cysteine-type endopeptidase activity",2]
["regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["regulation of cytochrome-c oxidase activity",1]
["regulation of cytokine production",5]
["regulation of cytokine-mediated signaling pathway",1]
["regulation of cytokinesis",5]
["regulation of cytokinetic process",1]
["regulation of cytokinin dehydrogenase activity",1]
["regulation of cytokinin-activated signaling pathway",4]
["regulation of cytoplasmic mRNA processing body assembly",1]
["regulation of cytoplasmic translation",3]
["regulation of cytoplasmic translational elongation",3]
["regulation of cytoplasmic transport",3]
["regulation of cytoskeleton organization",9]
["regulation of cytosolic calcium ion concentration",2]
["regulation of defense response",45]
["regulation of defense response to bacterium",7]
["regulation of defense response to fungus",3]
["regulation of defense response to oomycetes",1]
["regulation of defense response to virus",2]
["regulation of defense response to virus by host",2]
["regulation of dendrite development",2]
["regulation of dendrite extension",1]
["regulation of dendritic spine development",1]
["regulation of dense core granule transport",1]
["regulation of deoxyribonuclease activity",1]
["regulation of dephosphorylation",9]
["regulation of development- heterochronic",9]
["regulation of developmental growth",20]
["regulation of developmental process",115]
["regulation of division septum assembly",1]
["regulation of DNA binding",2]
["regulation of DNA biosynthetic process",9]
["regulation of DNA endoreduplication",9]
["regulation of DNA metabolic process",45]
["regulation of DNA methylation",5]
["regulation of DNA methylation-dependent heterochromatin assembly",1]
["regulation of DNA recombination",6]
["regulation of DNA recombination at centromere",1]
["regulation of DNA repair",9]
["regulation of DNA replication",22]
["regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["regulation of DNA-binding transcription factor activity",2]
["regulation of DNA-dependent DNA replication",20]
["regulation of DNA-dependent DNA replication initiation",4]
["regulation of DNA-directed DNA polymerase activity",4]
["regulation of DNA-templated transcription in response to stress",1]
["regulation of DNA-templated transcription- elongation",5]
["regulation of DNA-templated transcription- initiation",4]
["regulation of DNA-templated transcription- termination",2]
["regulation of double-strand break repair",3]
["regulation of double-strand break repair via homologous recombination",2]
["regulation of early endosome to late endosome transport",2]
["regulation of electron transfer activity",1]
["regulation of embryo sac egg cell differentiation",1]
["regulation of embryonic development",3]
["regulation of endocytic recycling",1]
["regulation of endocytosis",6]
["regulation of endodeoxyribonuclease activity",1]
["regulation of endopeptidase activity",4]
["regulation of endoplasmic reticulum unfolded protein response",1]
["regulation of endosome organization",1]
["regulation of endosome size",1]
["regulation of endosperm development",1]
["regulation of endothelial cell migration",1]
["regulation of entry of bacterium into host cell",1]
["regulation of epidermal cell differentiation",2]
["regulation of epidermal cell division",1]
["regulation of epidermal growth factor receptor signaling pathway",2]
["regulation of epidermal growth factor-activated receptor activity",1]
["regulation of epidermis development",2]
["regulation of epithelial cell differentiation",2]
["regulation of epithelial cell migration",1]
["regulation of epithelial cell proliferation",1]
["regulation of epithelial to mesenchymal transition",1]
["regulation of ER to Golgi vesicle-mediated transport",1]
["regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["regulation of ERAD pathway",2]
["regulation of ERBB signaling pathway",2]
["regulation of ERK1 and ERK2 cascade",3]
["regulation of establishment of cell polarity",1]
["regulation of establishment of planar polarity",2]
["regulation of establishment of protein localization",12]
["regulation of establishment of protein localization to mitochondrion",1]
["regulation of establishment or maintenance of cell polarity",1]
["regulation of ethylene biosynthetic process",3]
["regulation of ethylene-activated signaling pathway",7]
["regulation of exit from mitosis",1]
["regulation of exocytosis",2]
["regulation of exosomal secretion",1]
["regulation of extrinsic apoptotic signaling pathway",1]
["regulation of fat cell differentiation",1]
["regulation of fatty acid biosynthetic process",1]
["regulation of fatty acid metabolic process",1]
["regulation of fatty acid transport",1]
["regulation of feeding behavior",1]
["regulation of female receptivity",1]
["regulation of fertilization",1]
["regulation of fibroblast growth factor receptor signaling pathway",1]
["regulation of fibroblast migration",1]
["regulation of fibroblast proliferation",1]
["regulation of filamentous growth",1]
["regulation of filamentous growth of a population of unicellular organisms",1]
["regulation of flavonoid biosynthetic process",3]
["regulation of floral organ abscission",1]
["regulation of flower development",21]
["regulation of G protein-coupled receptor signaling pathway",1]
["regulation of G0 to G1 transition",1]
["regulation of G1/S transition of mitotic cell cycle",4]
["regulation of G2/M transition of mitotic cell cycle",7]
["regulation of gene expression",209]
["regulation of gene expression by genetic imprinting",3]
["regulation of gene expression- epigenetic",31]
["regulation of gene silencing",20]
["regulation of gene silencing by miRNA",3]
["regulation of gene silencing by RNA",5]
["regulation of generation of precursor metabolites and energy",11]
["regulation of genetic imprinting",2]
["regulation of gibberellic acid mediated signaling pathway",3]
["regulation of glial cell differentiation",1]
["regulation of gliogenesis",1]
["regulation of glucan biosynthetic process",3]
["regulation of gluconeogenesis",1]
["regulation of glucose metabolic process",1]
["regulation of glutamine family amino acid metabolic process",1]
["regulation of glycolytic process",2]
["regulation of glycoprotein biosynthetic process",1]
["regulation of glycoprotein metabolic process",1]
["regulation of growth",38]
["regulation of growth of unicellular organism as a thread of attached cells",1]
["regulation of growth rate",2]
["regulation of GTPase activity",14]
["regulation of heart contraction",1]
["regulation of heart growth",1]
["regulation of hematopoietic progenitor cell differentiation",1]
["regulation of hemopoiesis",3]
["regulation of heterochromatin assembly",1]
["regulation of heterochromatin island assembly",1]
["regulation of hippo signaling",1]
["regulation of histone acetylation",4]
["regulation of histone H3-K27 methylation",1]
["regulation of histone H3-K27 trimethylation",1]
["regulation of histone H3-K36 methylation",2]
["regulation of histone H3-K36 trimethylation",2]
["regulation of histone H3-K4 methylation",1]
["regulation of histone H3-K9 methylation",1]
["regulation of histone H4 acetylation",1]
["regulation of histone methylation",7]
["regulation of histone modification",10]
["regulation of hormone biosynthetic process",3]
["regulation of hormone levels",43]
["regulation of hormone metabolic process",7]
["regulation of hydrogen peroxide metabolic process",1]
["regulation of hydrolase activity",35]
["regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["regulation of I-kappaB kinase/NF-kappaB signaling",2]
["regulation of immune effector process",3]
["regulation of immune response",27]
["regulation of immune system process",30]
["regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["regulation of inflammatory response",1]
["regulation of innate immune response",23]
["regulation of inositol phosphate biosynthetic process",1]
["regulation of inositol trisphosphate biosynthetic process",1]
["regulation of insulin receptor signaling pathway",1]
["regulation of insulin-like growth factor receptor signaling pathway",2]
["regulation of interleukin-1 production",1]
["regulation of interleukin-8 production",4]
["regulation of intracellular estrogen receptor signaling pathway",1]
["regulation of intracellular pH",6]
["regulation of intracellular protein transport",10]
["regulation of intracellular signal transduction",32]
["regulation of intracellular steroid hormone receptor signaling pathway",2]
["regulation of intracellular transport",16]
["regulation of intralumenal vesicle formation",1]
["regulation of intrinsic apoptotic signaling pathway",2]
["regulation of invasive growth in response to glucose limitation",1]
["regulation of ion transmembrane transport",4]
["regulation of ion transmembrane transporter activity",3]
["regulation of ion transport",8]
["regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter",2]
["regulation of iron ion transport",2]
["regulation of iron-sulfur cluster assembly",1]
["regulation of isomerase activity",1]
["regulation of isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",1]
["regulation of isoprenoid metabolic process",3]
["regulation of jasmonic acid mediated signaling pathway",4]
["regulation of JNK cascade",1]
["regulation of kinase activity",25]
["regulation of kinetochore assembly",1]
["regulation of L-ascorbic acid biosynthetic process",1]
["regulation of lateral root development",1]
["regulation of leaf development",7]
["regulation of leaf morphogenesis",1]
["regulation of leaf senescence",1]
["regulation of leukocyte activation",1]
["regulation of leukocyte differentiation",1]
["regulation of leukocyte proliferation",1]
["regulation of lignin biosynthetic process",2]
["regulation of lipase activity",3]
["regulation of lipid biosynthetic process",6]
["regulation of lipid catabolic process",1]
["regulation of lipid kinase activity",1]
["regulation of lipid localization",3]
["regulation of lipid metabolic process",10]
["regulation of lipid storage",1]
["regulation of lipid transport",2]
["regulation of lipophagy",2]
["regulation of localization",54]
["regulation of locomotion",8]
["regulation of locomotion involved in locomotory behavior",1]
["regulation of long-day photoperiodism- flowering",4]
["regulation of lyase activity",2]
["regulation of lymphoid progenitor cell differentiation",1]
["regulation of lysosomal lumen pH",1]
["regulation of macroautophagy",6]
["regulation of macromolecule biosynthetic process",176]
["regulation of macromolecule metabolic process",295]
["regulation of macropinocytosis",1]
["regulation of MAP kinase activity",7]
["regulation of MAPK cascade",11]
["regulation of mast cell activation",1]
["regulation of mast cell activation involved in immune response",1]
["regulation of mast cell proliferation",1]
["regulation of mating type switching",1]
["regulation of megakaryocyte differentiation",1]
["regulation of meiosis I",2]
["regulation of meiotic cell cycle",9]
["regulation of meiotic cell cycle phase transition",1]
["regulation of meiotic chromosome separation",1]
["regulation of meiotic nuclear division",6]
["regulation of membrane lipid distribution",2]
["regulation of membrane permeability",2]
["regulation of membrane potential",10]
["regulation of meristem development",23]
["regulation of meristem growth",11]
["regulation of meristem structural organization",4]
["regulation of mesoderm development",1]
["regulation of metabolic process",343]
["regulation of metal ion transport",4]
["regulation of metaphase/anaphase transition of cell cycle",12]
["regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["regulation of MHC class II biosynthetic process",2]
["regulation of microtubule cytoskeleton organization",1]
["regulation of microtubule motor activity",1]
["regulation of microtubule nucleation",1]
["regulation of microtubule polymerization",1]
["regulation of microtubule polymerization or depolymerization",1]
["regulation of microtubule-based movement",1]
["regulation of microtubule-based process",3]
["regulation of mitochondrial membrane permeability",2]
["regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["regulation of mitochondrial membrane potential",2]
["regulation of mitochondrial RNA catabolic process",1]
["regulation of mitochondrion organization",1]
["regulation of mitotic cell cycle",40]
["regulation of mitotic cell cycle DNA replication",1]
["regulation of mitotic cell cycle phase transition",23]
["regulation of mitotic cell cycle spindle assembly checkpoint",3]
["regulation of mitotic cell cycle- embryonic",1]
["regulation of mitotic cytokinesis",1]
["regulation of mitotic cytokinetic process",1]
["regulation of mitotic metaphase/anaphase transition",12]
["regulation of mitotic nuclear division",15]
["regulation of mitotic sister chromatid segregation",12]
["regulation of mitotic sister chromatid separation",12]
["regulation of mitotic spindle checkpoint",3]
["regulation of molecular function",94]
["regulation of morphogenesis of a branching structure",5]
["regulation of morphogenesis of an epithelium",2]
["regulation of mRNA 3'-end processing",1]
["regulation of mRNA catabolic process",7]
["regulation of mRNA cleavage",1]
["regulation of mRNA export from nucleus",1]
["regulation of mRNA metabolic process",14]
["regulation of mRNA polyadenylation",1]
["regulation of mRNA processing",8]
["regulation of mRNA splicing- via spliceosome",6]
["regulation of mRNA stability",6]
["regulation of multi-organism process",25]
["regulation of multicellular organism growth",1]
["regulation of multicellular organismal development",85]
["regulation of multicellular organismal process",92]
["regulation of muscle cell apoptotic process",1]
["regulation of muscle cell differentiation",2]
["regulation of muscle contraction",2]
["regulation of muscle organ development",1]
["regulation of muscle system process",2]
["regulation of muscle tissue development",1]
["regulation of myeloid cell differentiation",2]
["regulation of myeloid leukocyte differentiation",1]
["regulation of myoblast fusion",1]
["regulation of myotube differentiation",1]
["regulation of NAD(P)H oxidase activity",1]
["regulation of nervous system development",5]
["regulation of neurogenesis",4]
["regulation of neuromuscular junction development",1]
["regulation of neuron apoptotic process",2]
["regulation of neuron death",2]
["regulation of neuron differentiation",3]
["regulation of neuron migration",1]
["regulation of neuron projection development",3]
["regulation of neuronal synaptic plasticity",1]
["regulation of neurotransmitter levels",10]
["regulation of NIK/NF-kappaB signaling",1]
["regulation of nitrate assimilation",1]
["regulation of nitrogen compound metabolic process",252]
["regulation of nitrogen cycle metabolic process",1]
["regulation of nitrogen utilization",1]
["regulation of nodal signaling pathway",1]
["regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["regulation of non-canonical Wnt signaling pathway",2]
["regulation of Notch signaling pathway",1]
["regulation of nuclear cell cycle DNA replication",1]
["regulation of nuclear division",21]
["regulation of nuclear-transcribed mRNA catabolic process- deadenylation-dependent decay",1]
["regulation of nuclear-transcribed mRNA poly(A) tail shortening",1]
["regulation of nuclease activity",1]
["regulation of nucleic acid-templated transcription",128]
["regulation of nucleobase-containing compound metabolic process",182]
["regulation of nucleobase-containing compound transport",2]
["regulation of nucleocytoplasmic transport",7]
["regulation of nucleotide biosynthetic process",3]
["regulation of nucleotide catabolic process",2]
["regulation of nucleotide metabolic process",3]
["regulation of nucleus size",1]
["regulation of nurse cell apoptotic process",1]
["regulation of odontogenesis",1]
["regulation of odontogenesis of dentin-containing tooth",1]
["regulation of olefin biosynthetic process",3]
["regulation of olefin metabolic process",3]
["regulation of oligodendrocyte differentiation",1]
["regulation of oogenesis",1]
["regulation of organ growth",1]
["regulation of organelle assembly",7]
["regulation of organelle organization",70]
["regulation of organic acid transport",1]
["regulation of ornithine metabolic process",1]
["regulation of osteoclast development",1]
["regulation of osteoclast differentiation",1]
["regulation of oviposition",1]
["regulation of oxidative phosphorylation",1]
["regulation of oxidative stress-induced cell death",1]
["regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["regulation of oxidative stress-induced neuron death",1]
["regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["regulation of oxidoreductase activity",4]
["regulation of pathway-restricted SMAD protein phosphorylation",1]
["regulation of peptidase activity",4]
["regulation of peptide secretion",2]
["regulation of peptide transport",12]
["regulation of peptidyl-lysine acetylation",5]
["regulation of peptidyl-serine phosphorylation",2]
["regulation of peptidyl-serine phosphorylation of STAT protein",1]
["regulation of peptidyl-threonine phosphorylation",3]
["regulation of peptidyl-tyrosine phosphorylation",2]
["regulation of peroxisome size",2]
["regulation of pH",7]
["regulation of phagosome maturation",1]
["regulation of phenylpropanoid metabolic process",3]
["regulation of phosphatase activity",9]
["regulation of phosphate metabolic process",47]
["regulation of phosphatidylinositol 3-kinase activity",1]
["regulation of phospholipase A2 activity",1]
["regulation of phospholipase activity",3]
["regulation of phospholipase C activity",1]
["regulation of phospholipid biosynthetic process",1]
["regulation of phospholipid metabolic process",2]
["regulation of phospholipid translocation",1]
["regulation of phospholipid transport",1]
["regulation of phosphoprotein phosphatase activity",8]
["regulation of phosphorelay signal transduction system",7]
["regulation of phosphorus metabolic process",47]
["regulation of phosphorylation",36]
["regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["regulation of photomorphogenesis",5]
["regulation of photoperiodism- flowering",8]
["regulation of photosynthesis",11]
["regulation of photosynthesis- light reaction",7]
["regulation of phytol biosynthetic process",1]
["regulation of pinocytosis",1]
["regulation of plant organ formation",7]
["regulation of plant organ morphogenesis",2]
["regulation of plant-type cell wall cellulose biosynthetic process",2]
["regulation of plant-type hypersensitive response",5]
["regulation of plasma membrane bounded cell projection assembly",3]
["regulation of plasma membrane bounded cell projection organization",6]
["regulation of podosome assembly",1]
["regulation of polysaccharide biosynthetic process",3]
["regulation of polysaccharide metabolic process",3]
["regulation of post-embryonic development",52]
["regulation of post-embryonic root development",5]
["regulation of postsynaptic membrane potential",1]
["regulation of posttranscriptional gene silencing",7]
["regulation of potassium ion transmembrane transport",1]
["regulation of potassium ion transmembrane transporter activity",1]
["regulation of potassium ion transport",1]
["regulation of pri-miRNA transcription by RNA polymerase II",1]
["regulation of primary metabolic process",263]
["regulation of pro-B cell differentiation",1]
["regulation of production of miRNAs involved in gene silencing by miRNA",1]
["regulation of production of siRNA involved in RNA interference",2]
["regulation of production of small RNA involved in gene silencing by RNA",3]
["regulation of programmed cell death",25]
["regulation of proteasomal protein catabolic process",8]
["regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["regulation of protein acetylation",5]
["regulation of protein catabolic process",12]
["regulation of protein complex stability",1]
["regulation of protein deacetylation",1]
["regulation of protein dephosphorylation",8]
["regulation of protein depolymerization",1]
["regulation of protein deubiquitination",1]
["regulation of protein exit from endoplasmic reticulum",3]
["regulation of protein export from nucleus",3]
["regulation of protein geranylgeranylation",2]
["regulation of protein glycosylation",1]
["regulation of protein glycosylation in Golgi",1]
["regulation of protein import",3]
["regulation of protein import into chloroplast stroma",1]
["regulation of protein import into nucleus",2]
["regulation of protein K63-linked deubiquitination",1]
["regulation of protein K63-linked ubiquitination",1]
["regulation of protein kinase activity",24]
["regulation of protein kinase B signaling",1]
["regulation of protein localization",14]
["regulation of protein localization to cell surface",2]
["regulation of protein localization to kinetochore",1]
["regulation of protein localization to nucleus",3]
["regulation of protein maturation",1]
["regulation of protein metabolic process",92]
["regulation of protein modification by small protein conjugation or removal",4]
["regulation of protein modification process",55]
["regulation of protein phosphorylation",32]
["regulation of protein polymerization",7]
["regulation of protein polyubiquitination",1]
["regulation of protein processing",1]
["regulation of protein secretion",2]
["regulation of protein serine/threonine kinase activity",14]
["regulation of protein stability",5]
["regulation of protein targeting",2]
["regulation of protein targeting to mitochondrion",1]
["regulation of protein transport",12]
["regulation of protein tyrosine kinase activity",1]
["regulation of protein ubiquitination",3]
["regulation of protein-containing complex assembly",18]
["regulation of protein-containing complex disassembly",4]
["regulation of proteolysis",15]
["regulation of proteolysis involved in cellular protein catabolic process",8]
["regulation of proton transport",1]
["regulation of pseudopodium assembly",1]
["regulation of purine nucleotide biosynthetic process",3]
["regulation of purine nucleotide metabolic process",3]
["regulation of radial pattern formation",1]
["regulation of Ras protein signal transduction",2]
["regulation of reactive oxygen species metabolic process",4]
["regulation of receptor internalization",3]
["regulation of receptor signaling pathway via JAK-STAT",2]
["regulation of receptor signaling pathway via STAT",2]
["regulation of receptor-mediated endocytosis",3]
["regulation of reciprocal meiotic recombination",2]
["regulation of red or far-red light signaling pathway",1]
["regulation of release of sequestered calcium ion into cytosol",1]
["regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum",1]
["regulation of reproductive process",50]
["regulation of response to alcohol",14]
["regulation of response to biotic stimulus",13]
["regulation of response to cytokine stimulus",1]
["regulation of response to DNA damage stimulus",9]
["regulation of response to drug",4]
["regulation of response to endoplasmic reticulum stress",3]
["regulation of response to external stimulus",16]
["regulation of response to extracellular stimulus",1]
["regulation of response to nutrient levels",1]
["regulation of response to osmotic stress",3]
["regulation of response to oxidative stress",4]
["regulation of response to reactive oxygen species",2]
["regulation of response to red or far red light",8]
["regulation of response to salt stress",3]
["regulation of response to stimulus",156]
["regulation of response to stress",70]
["regulation of response to water deprivation",5]
["regulation of response to wounding",1]
["regulation of ribonucleoprotein complex localization",1]
["regulation of ribosome biogenesis",2]
["regulation of RNA biosynthetic process",128]
["regulation of RNA export from nucleus",2]
["regulation of RNA interference",3]
["regulation of RNA metabolic process",147]
["regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["regulation of RNA splicing",7]
["regulation of RNA stability",8]
["regulation of root development",15]
["regulation of root meristem growth",8]
["regulation of root morphogenesis",1]
["regulation of rRNA processing",2]
["regulation of ruffle assembly",1]
["regulation of salicylic acid mediated signaling pathway",4]
["regulation of salicylic acid metabolic process",2]
["regulation of sarcomere organization",1]
["regulation of secondary metabolic process",4]
["regulation of secondary metabolite biosynthetic process",4]
["regulation of secondary shoot formation",5]
["regulation of secretion",4]
["regulation of secretion by cell",4]
["regulation of seed development",6]
["regulation of seed dormancy process",1]
["regulation of seed germination",8]
["regulation of seed growth",4]
["regulation of seed maturation",1]
["regulation of seedling development",10]
["regulation of septation initiation signaling",1]
["regulation of sequestering of calcium ion",1]
["regulation of sequestering of triglyceride",1]
["regulation of shade avoidance",1]
["regulation of shoot apical meristem development",1]
["regulation of shoot system development",32]
["regulation of shoot system morphogenesis",6]
["regulation of short-day photoperiodism- flowering",2]
["regulation of short-term neuronal synaptic plasticity",1]
["regulation of signal transduction",89]
["regulation of signal transduction by p53 class mediator",4]
["regulation of signaling",92]
["regulation of signaling receptor activity",2]
["regulation of sinapate ester biosynthetic process",1]
["regulation of single-species biofilm formation",1]
["regulation of sister chromatid segregation",12]
["regulation of small GTPase mediated signal transduction",2]
["regulation of small molecule metabolic process",15]
["regulation of smooth muscle cell proliferation",1]
["regulation of smooth muscle contraction",1]
["regulation of smoothened signaling pathway",2]
["regulation of SNARE complex assembly",3]
["regulation of sodium ion transport",1]
["regulation of sorocarp development",2]
["regulation of sorocarp spore cell differentiation",1]
["regulation of spindle checkpoint",3]
["regulation of sporulation",1]
["regulation of sprouting angiogenesis",1]
["regulation of starch biosynthetic process",1]
["regulation of starch metabolic process",1]
["regulation of stem cell differentiation",2]
["regulation of stem cell division",4]
["regulation of stem cell population maintenance",2]
["regulation of sterigmatocystin biosynthetic process",1]
["regulation of steroid biosynthetic process",2]
["regulation of steroid metabolic process",2]
["regulation of sterol biosynthetic process",2]
["regulation of stomatal closure",3]
["regulation of stomatal movement",15]
["regulation of stress-activated MAPK cascade",2]
["regulation of stress-activated protein kinase signaling cascade",2]
["regulation of striated muscle cell apoptotic process",1]
["regulation of striated muscle cell differentiation",2]
["regulation of striated muscle contraction",1]
["regulation of striated muscle tissue development",1]
["regulation of sulfur amino acid metabolic process",3]
["regulation of sulfur metabolic process",4]
["regulation of supramolecular fiber organization",7]
["regulation of synapse assembly",1]
["regulation of synapse organization",1]
["regulation of synapse structure or activity",1]
["regulation of synaptic assembly at neuromuscular junction",1]
["regulation of synaptic plasticity",1]
["regulation of synaptic transmission- glutamatergic",2]
["regulation of synaptic vesicle cycle",1]
["regulation of synaptic vesicle recycling",1]
["regulation of syncytium formation by plasma membrane fusion",1]
["regulation of syringal lignin biosynthetic process",1]
["regulation of system process",2]
["regulation of systemic acquired resistance",4]
["regulation of telomerase activity",2]
["regulation of telomerase RNA localization to Cajal body",2]
["regulation of telomere maintenance",6]
["regulation of telomere maintenance via telomerase",5]
["regulation of telomere maintenance via telomere lengthening",5]
["regulation of tetrapyrrole biosynthetic process",3]
["regulation of tetrapyrrole metabolic process",4]
["regulation of timing of meristematic phase transition",7]
["regulation of timing of plant organ formation",1]
["regulation of timing of transition from vegetative to reproductive phase",7]
["regulation of tocopherol cyclase activity",1]
["regulation of TOR signaling",2]
["regulation of TORC1 signaling",1]
["regulation of trans-synaptic signaling",3]
["regulation of transcription by RNA polymerase I",1]
["regulation of transcription by RNA polymerase II",34]
["regulation of transcription by RNA polymerase III",1]
["regulation of transcription elongation from RNA polymerase II promoter",3]
["regulation of transcription from RNA polymerase II promoter in response to stress",1]
["regulation of transcription initiation from RNA polymerase II promoter",1]
["regulation of transcription involved in G1/S transition of mitotic cell cycle",1]
["regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["regulation of transcription regulatory region DNA binding",1]
["regulation of transcription- DNA-templated",126]
["regulation of transferase activity",31]
["regulation of transforming growth factor beta receptor signaling pathway",1]
["regulation of translation",20]
["regulation of translational elongation",3]
["regulation of translational initiation",3]
["regulation of translational termination",1]
["regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",4]
["regulation of transmembrane transport",5]
["regulation of transmembrane transporter activity",3]
["regulation of transport",45]
["regulation of transporter activity",3]
["regulation of trichome morphogenesis",1]
["regulation of triglyceride catabolic process",1]
["regulation of triglyceride metabolic process",1]
["regulation of tryptophan metabolic process",1]
["regulation of tumor necrosis factor production",1]
["regulation of tumor necrosis factor superfamily cytokine production",1]
["regulation of tumor necrosis factor-mediated signaling pathway",1]
["regulation of tyrosine phosphorylation of STAT protein",1]
["regulation of ubiquitin-dependent protein catabolic process",7]
["regulation of ubiquitin-protein transferase activity",1]
["regulation of ubiquitin-specific protease activity",1]
["regulation of unidimensional cell growth",3]
["regulation of urease activity",2]
["regulation of vacuolar transport",1]
["regulation of vacuole fusion- non-autophagic",2]
["regulation of vacuole organization",5]
["regulation of vasculature development",2]
["regulation of vegetative phase change",1]
["regulation of vernalization response",2]
["regulation of vesicle fusion",10]
["regulation of vesicle-mediated transport",20]
["regulation of viral genome replication",1]
["regulation of viral life cycle",1]
["regulation of viral process",3]
["regulation of vitamin E biosynthetic process",1]
["regulation of vitamin metabolic process",2]
["regulation of Wnt signaling pathway",7]
["regulation of Wnt signaling pathway- planar cell polarity pathway",1]
["regulation of wound healing",1]
["removal of superoxide radicals",1]
["renal system development",1]
["replication fork",16]
["replication fork processing",2]
["replication fork protection",1]
["replication fork protection complex",2]
["replication-born double-strand break repair via sister chromatid exchange",1]
["replisome",3]
["reproduction",235]
["reproduction of a single-celled organism",1]
["reproductive behavior",1]
["reproductive fruiting body development",1]
["reproductive process",232]
["reproductive process in single-celled organism",1]
["reproductive shoot system development",47]
["reproductive structure development",162]
["reproductive system development",162]
["rescue of stalled ribosome",1]
["resolution of meiotic recombination intermediates",6]
["resolution of recombination intermediates",1]
["respirasome",8]
["respiratory chain complex",8]
["respiratory chain complex I",6]
["respiratory chain complex II",1]
["respiratory chain complex III",1]
["respiratory chain complex IV assembly",1]
["respiratory electron transport chain",7]
["respiratory system development",5]
["respiratory tube development",3]
["response to abiotic stimulus",295]
["response to abscisic acid",63]
["response to absence of light",9]
["response to acetate",1]
["response to acid chemical",130]
["response to activity",1]
["response to alcohol",64]
["response to aluminum ion",2]
["response to amino acid",4]
["response to amino acid starvation",3]
["response to ammonium ion",1]
["response to anoxia",2]
["response to antibiotic",40]
["response to antineoplastic agent",1]
["response to arsenic-containing substance",4]
["response to ATP",1]
["response to auxin",32]
["response to bacterium",61]
["response to biotic stimulus",122]
["response to biotin",1]
["response to blue light",15]
["response to boron-containing substance",1]
["response to brassinosteroid",10]
["response to brefeldin A",1]
["response to bronchodilator",2]
["response to cadmium ion",65]
["response to calcium ion",3]
["response to cAMP",1]
["response to carbohydrate",33]
["response to cation stress",2]
["response to chemical",374]
["response to chitin",7]
["response to cobalt ion",1]
["response to cold",55]
["response to copper ion",2]
["response to copper ion starvation",1]
["response to curcumin",1]
["response to cycloheximide",1]
["response to cytokine",3]
["response to cytokinin",38]
["response to decreased oxygen levels",16]
["response to defenses of other organism",3]
["response to desiccation",2]
["response to disaccharide",18]
["response to drug",76]
["response to dsRNA",8]
["response to endogenous stimulus",172]
["response to endoplasmic reticulum stress",31]
["response to estrogen",2]
["response to ether",1]
["response to ethylene",26]
["response to external biotic stimulus",121]
["response to external stimulus",196]
["response to extracellular stimulus",63]
["response to far red light",8]
["response to flooding",1]
["response to fluid shear stress",1]
["response to freezing",4]
["response to fructose",5]
["response to fungicide",1]
["response to fungus",42]
["response to gamma radiation",5]
["response to gibberellin",7]
["response to glucose",9]
["response to gravity",11]
["response to growth factor",2]
["response to heat",33]
["response to herbivore",1]
["response to hexose",13]
["response to high light intensity",17]
["response to hormone",165]
["response to host",3]
["response to host defenses",3]
["response to host immune response",6]
["response to humidity",1]
["response to hydrogen peroxide",12]
["response to hypoxia",14]
["response to immobilization stress",1]
["response to indolebutyric acid",3]
["response to inorganic substance",146]
["response to insect",5]
["response to insulin",2]
["response to interferon-gamma",2]
["response to interleukin-1",1]
["response to ionizing radiation",12]
["response to iron ion",10]
["response to iron ion starvation",4]
["response to jasmonic acid",24]
["response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance",2]
["response to karrikin",14]
["response to ketone",2]
["response to leucine",1]
["response to light intensity",29]
["response to light stimulus",108]
["response to lipid",76]
["response to lipopolysaccharide",3]
["response to lithium ion",1]
["response to low fluence blue light stimulus by blue low-fluence system",3]
["response to low light intensity stimulus",4]
["response to magnesium ion",1]
["response to magnetism",1]
["response to maltose",1]
["response to manganese ion",1]
["response to mechanical stimulus",3]
["response to metal ion",87]
["response to microbial phytotoxin",1]
["response to misfolded protein",5]
["response to mitochondrial depolarisation",1]
["response to molecule of bacterial origin",7]
["response to molecule of fungal origin",3]
["response to monosaccharide",13]
["response to nematode",19]
["response to nerve growth factor",1]
["response to nitrate",5]
["response to nitric oxide",2]
["response to nitrogen compound",52]
["response to nitrosative stress",1]
["response to nutrient",9]
["response to nutrient levels",58]
["response to oomycetes",2]
["response to organic cyclic compound",46]
["response to organic substance",229]
["response to organonitrogen compound",36]
["response to organophosphorus",1]
["response to osmotic stress",97]
["response to other organism",121]
["response to oxidative stress",71]
["response to oxygen levels",16]
["response to oxygen radical",3]
["response to oxygen-containing compound",192]
["response to ozone",6]
["response to peptide",3]
["response to peptide hormone",3]
["response to peptidoglycan",1]
["response to pheromone",1]
["response to pheromone triggering conjugation with cellular fusion",1]
["response to photooxidative stress",1]
["response to purine-containing compound",1]
["response to radiation",120]
["response to reactive oxygen species",32]
["response to red light",8]
["response to red or far red light",24]
["response to redox state",2]
["response to salicylic acid",19]
["response to salt",1]
["response to salt stress",84]
["response to silver ion",1]
["response to singlet oxygen",4]
["response to starvation",46]
["response to steroid hormone",6]
["response to stimulus",723]
["response to stress",458]
["response to strigolactone",1]
["response to sucrose",18]
["response to superoxide",1]
["response to symbiont",5]
["response to symbiotic bacterium",1]
["response to symbiotic fungus",3]
["response to temperature stimulus",89]
["response to topologically incorrect protein",12]
["response to toxic substance",29]
["response to transforming growth factor beta",1]
["response to trichostatin A",1]
["response to tumor necrosis factor",1]
["response to unfolded protein",8]
["response to UV",25]
["response to UV-A",1]
["response to UV-B",12]
["response to UV-C",3]
["response to virus",7]
["response to vitamin",3]
["response to vitamin B1",1]
["response to vitamin D",1]
["response to water",38]
["response to water deprivation",37]
["response to wounding",32]
["response to xenobiotic stimulus",1]
["response to zinc ion",8]
["reticulophagy",1]
["retrograde protein transport- ER to cytosol",2]
["retrograde transport- endosome to Golgi",8]
["retrograde transport- vesicle recycling within Golgi",1]
["retrograde vesicle-mediated transport- Golgi to endoplasmic reticulum",7]
["retromer complex",3]
["retromer complex binding",1]
["retromer- cargo-selective complex",1]
["rhamnogalacturonan I metabolic process",1]
["rhamnogalacturonan I side chain metabolic process",1]
["rhamnogalacturonan II biosynthetic process",1]
["rhamnogalacturonan II metabolic process",1]
["Rho protein signal transduction",1]
["rhythmic process",16]
["riboflavin biosynthetic process",4]
["riboflavin kinase activity",1]
["riboflavin metabolic process",4]
["riboflavin synthase activity",1]
["ribonuclease activity",17]
["ribonuclease H2 complex",1]
["ribonuclease inhibitor activity",1]
["ribonuclease MRP complex",1]
["ribonuclease P complex",1]
["ribonucleoprotein complex",111]
["ribonucleoprotein complex assembly",31]
["ribonucleoprotein complex binding",11]
["ribonucleoprotein complex biogenesis",90]
["ribonucleoprotein complex disassembly",2]
["ribonucleoprotein complex export from nucleus",18]
["ribonucleoprotein complex localization",18]
["ribonucleoprotein complex subunit organization",32]
["ribonucleoprotein granule",18]
["ribonucleoside binding",15]
["ribonucleoside biosynthetic process",7]
["ribonucleoside bisphosphate biosynthetic process",4]
["ribonucleoside bisphosphate catabolic process",1]
["ribonucleoside bisphosphate metabolic process",9]
["ribonucleoside catabolic process",1]
["ribonucleoside diphosphate biosynthetic process",1]
["ribonucleoside diphosphate metabolic process",11]
["ribonucleoside metabolic process",12]
["ribonucleoside monophosphate biosynthetic process",17]
["ribonucleoside monophosphate metabolic process",25]
["ribonucleoside triphosphate biosynthetic process",13]
["ribonucleoside triphosphate metabolic process",21]
["ribonucleotide binding",58]
["ribonucleotide biosynthetic process",27]
["ribonucleotide catabolic process",1]
["ribonucleotide metabolic process",40]
["ribose phosphate biosynthetic process",27]
["ribose phosphate diphosphokinase activity",1]
["ribose phosphate metabolic process",44]
["ribosomal large subunit assembly",9]
["ribosomal large subunit biogenesis",24]
["ribosomal large subunit export from nucleus",1]
["ribosomal protein import into nucleus",3]
["ribosomal small subunit assembly",2]
["ribosomal small subunit binding",1]
["ribosomal small subunit biogenesis",14]
["ribosomal subunit",16]
["ribosomal subunit export from nucleus",2]
["ribosome",29]
["ribosome assembly",14]
["ribosome binding",7]
["ribosome biogenesis",74]
["ribosome disassembly",2]
["ribosome localization",2]
["ribulose-1-5-bisphosphate carboxylase/oxygenase activator activity",1]
["ribulose-phosphate 3-epimerase activity",2]
["RNA (guanine-N7)-methylation",2]
["RNA 3' uridylation",2]
["RNA 3'-end processing",24]
["RNA 5'-end processing",3]
["RNA acetylation",1]
["RNA binding",146]
["RNA biosynthetic process",34]
["RNA cap binding",2]
["RNA cap binding complex",4]
["RNA capping",1]
["RNA catabolic process",33]
["RNA destabilization",1]
["RNA export from nucleus",20]
["RNA folding",1]
["RNA guanylyltransferase activity",1]
["RNA helicase activity",64]
["RNA interference",4]
["RNA localization",25]
["RNA metabolic process",249]
["RNA methylation",17]
["RNA methyltransferase activity",12]
["RNA modification",57]
["RNA N6-methyladenosine methyltransferase complex",2]
["RNA nuclear export complex",1]
["RNA phosphodiester bond hydrolysis",33]
["RNA phosphodiester bond hydrolysis- endonucleolytic",14]
["RNA phosphodiester bond hydrolysis- exonucleolytic",10]
["RNA polyadenylation",11]
["RNA polymerase activity",3]
["RNA polymerase binding",6]
["RNA polymerase complex",21]
["RNA polymerase core enzyme binding",3]
["RNA polymerase I complex",1]
["RNA polymerase II C-terminal domain binding",1]
["RNA polymerase II C-terminal domain phosphoserine binding",1]
["RNA polymerase II cis-regulatory region sequence-specific DNA binding",2]
["RNA polymerase II complex binding",3]
["RNA polymerase II CTD heptapeptide repeat phosphatase activity",1]
["RNA polymerase II general transcription initiation factor binding",1]
["RNA polymerase II preinitiation complex assembly",1]
["RNA polymerase II transcription regulator complex",12]
["RNA polymerase II transcription regulatory region sequence-specific DNA binding",8]
["RNA polymerase II transcription repressor complex",1]
["RNA polymerase II- core complex",2]
["RNA polymerase II- holoenzyme",15]
["RNA polymerase II-specific DNA-binding transcription factor binding",9]
["RNA polymerase III complex",1]
["RNA polymerase III transcription regulator complex",1]
["RNA polymerase III transcription regulatory region sequence-specific DNA binding",1]
["RNA polymerase III type 3 promoter sequence-specific DNA binding",1]
["RNA polymerase IV complex",1]
["RNA polymerase V complex",1]
["RNA processing",148]
["RNA repair",1]
["RNA secondary structure unwinding",23]
["RNA splicing",42]
["RNA splicing- via endonucleolytic cleavage and ligation",2]
["RNA splicing- via transesterification reactions",35]
["RNA splicing- via transesterification reactions with bulged adenosine as nucleophile",35]
["RNA stabilization",3]
["RNA stem-loop binding",3]
["RNA surveillance",8]
["RNA transport",22]
["RNA uridylyltransferase activity",3]
["RNA-dependent DNA biosynthetic process",4]
["RNA-DNA hybrid ribonuclease activity",1]
["roof of mouth development",1]
["root cap development",2]
["root development",85]
["root epidermal cell differentiation",22]
["root hair",2]
["root hair cell development",15]
["root hair cell differentiation",18]
["root hair cell tip growth",2]
["root hair elongation",9]
["root hair initiation",1]
["root hair tip",1]
["root meristem growth",2]
["root meristem specification",2]
["root morphogenesis",51]
["root system development",85]
["rough endoplasmic reticulum",3]
["rough endoplasmic reticulum membrane",2]
["rRNA (adenine-N6-)-methyltransferase activity",1]
["rRNA (adenine-N6-N6-)-dimethyltransferase activity",1]
["rRNA (adenine) methyltransferase activity",2]
["rRNA (cytosine-C5-)-methyltransferase activity",2]
["rRNA (cytosine-N4-)-methyltransferase activity",1]
["rRNA (cytosine) methyltransferase activity",3]
["rRNA (guanine-N7)-methylation",1]
["rRNA (guanine) methyltransferase activity",2]
["rRNA (pseudouridine) methyltransferase activity",1]
["rRNA (uridine-2'-O-)-methyltransferase activity",1]
["rRNA (uridine) methyltransferase activity",1]
["rRNA 2'-O-methylation",1]
["rRNA 3'-end processing",5]
["rRNA 5'-end processing",2]
["rRNA acetylation",1]
["rRNA acetylation involved in maturation of SSU-rRNA",1]
["rRNA base methylation",6]
["rRNA binding",7]
["rRNA catabolic process",8]
["rRNA cytidine N-acetyltransferase activity",1]
["rRNA export from nucleus",1]
["rRNA metabolic process",61]
["rRNA methylation",10]
["rRNA methyltransferase activity",8]
["rRNA modification",18]
["rRNA processing",60]
["rRNA pseudouridine synthesis",6]
["rRNA transport",1]
["rRNA-containing ribonucleoprotein complex export from nucleus",3]
["RSC-type complex",1]
["ruffle",1]
["ruffle membrane",1]
["S-acyltransferase activity",1]
["S-adenosyl-L-methionine binding",3]
["S-adenosylhomocysteine metabolic process",1]
["S-adenosylmethionine catabolic process",1]
["S-adenosylmethionine metabolic process",5]
["S-adenosylmethionine-dependent methyltransferase activity",45]
["S-formylglutathione hydrolase activity",1]
["S-glycoside biosynthetic process",3]
["S-glycoside catabolic process",3]
["S-glycoside metabolic process",7]
["S-methyltransferase activity",1]
["saccharopine dehydrogenase activity",1]
["SAGA complex",1]
["SAGA-type complex",1]
["salicylic acid mediated signaling pathway",9]
["salivary gland development",1]
["sarcolemma",1]
["sarcomere",1]
["SCAR complex",2]
["SCF ubiquitin ligase complex",6]
["SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",3]
["Schwann cell differentiation",1]
["Schwann cell proliferation",1]
["Sec62/Sec63 complex",1]
["second-messenger-mediated signaling",6]
["secondary active transmembrane transporter activity",28]
["secondary alcohol biosynthetic process",1]
["secondary alcohol metabolic process",1]
["secondary cell wall",2]
["secondary metabolic process",28]
["secondary metabolite biosynthetic process",19]
["secondary plasmodesma",1]
["secondary shoot formation",6]
["secretion",19]
["secretion by cell",18]
["secretory granule",5]
["secretory granule lumen",1]
["secretory granule maturation",1]
["secretory granule membrane",3]
["secretory granule organization",2]
["secretory vesicle",6]
["sedoheptulose-bisphosphatase activity",1]
["seed coat development",7]
["seed development",100]
["seed dormancy process",2]
["seed germination",10]
["seed maturation",4]
["seed oilbody biogenesis",1]
["seedling development",13]
["selective autophagy",3]
["selenium compound metabolic process",3]
["sensory organ development",3]
["sensory organ morphogenesis",2]
["sensory perception",2]
["sensory perception of light stimulus",1]
["sensory perception of mechanical stimulus",1]
["sensory perception of sound",1]
["sepal development",2]
["sepal formation",1]
["sepal morphogenesis",1]
["sepal vascular tissue pattern formation",1]
["septum digestion after cytokinesis",1]
["sequence-specific DNA binding",33]
["sequence-specific double-stranded DNA binding",12]
["sequence-specific single stranded DNA binding",1]
["serine C-palmitoyltransferase activity",1]
["serine C-palmitoyltransferase complex",2]
["serine family amino acid biosynthetic process",8]
["serine family amino acid catabolic process",2]
["serine family amino acid metabolic process",10]
["serine hydrolase activity",8]
["serine O-acetyltransferase activity",2]
["serine O-acyltransferase activity",2]
["serine racemase activity",1]
["serine transmembrane transporter activity",1]
["serine transport",1]
["serine-glyoxylate transaminase activity",1]
["serine-pyruvate transaminase activity",1]
["serine-tRNA ligase activity",1]
["serine-type carboxypeptidase activity",5]
["serine-type endopeptidase activity",3]
["serine-type exopeptidase activity",5]
["serine-type peptidase activity",8]
["serine/threonine protein kinase complex",8]
["seryl-tRNA aminoacylation",1]
["sesquiterpenoid biosynthetic process",3]
["sesquiterpenoid metabolic process",3]
["Set1C/COMPASS complex",2]
["sex differentiation",2]
["sexual reproduction",29]
["sexual sporulation",3]
["sexual sporulation resulting in formation of a cellular spore",1]
["SH2 domain binding",1]
["shade avoidance",3]
["shikimate 3-dehydrogenase (NADP+) activity",1]
["shikimate metabolic process",1]
["shoot apical meristem development",1]
["shoot axis formation",6]
["shoot system development",105]
["shoot system morphogenesis",28]
["short-chain carboxylesterase activity",1]
["short-chain fatty acid metabolic process",1]
["short-day photoperiodism",1]
["short-day photoperiodism- flowering",1]
["sialic acid transmembrane transporter activity",4]
["sialic acid transport",4]
["side of membrane",11]
["sieve element differentiation",1]
["sieve plate",1]
["sigma factor activity",2]
["signal peptide processing",1]
["signal recognition particle",1]
["signal recognition particle binding",1]
["signal recognition particle- endoplasmic reticulum targeting",1]
["signal release",2]
["signal release from synapse",2]
["signal sequence binding",8]
["signal transduction",159]
["signal transduction by p53 class mediator",1]
["signal transduction in response to DNA damage",3]
["signaling",152]
["signaling receptor activity",25]
["signaling receptor binding",16]
["signaling receptor complex adaptor activity",1]
["signaling receptor regulator activity",1]
["silent mating-type cassette heterochromatin assembly",1]
["simple leaf morphogenesis",2]
["Sin3 complex",1]
["Sin3-type complex",1]
["single base insertion or deletion binding",1]
["single fertilization",1]
["single strand break repair",1]
["single-stranded DNA binding",20]
["single-stranded DNA endodeoxyribonuclease activity",2]
["single-stranded RNA binding",15]
["single-stranded telomeric DNA binding",1]
["singlet oxygen-mediated programmed cell death",3]
["sister chromatid biorientation",1]
["sister chromatid cohesion",6]
["sister chromatid segregation",20]
["site of DNA damage",4]
["site of double-strand break",4]
["site of polarized growth",6]
["site-specific DNA-methyltransferase (adenine-specific) activity",1]
["skeletal system development",2]
["skeletal system morphogenesis",1]
["Ski complex",1]
["skin development",2]
["skin epidermis development",2]
["skotomorphogenesis",3]
["Sm-like protein family complex",15]
["SMAD binding",1]
["small GTPase binding",51]
["small GTPase mediated signal transduction",3]
["small molecule binding",92]
["small molecule biosynthetic process",130]
["small molecule catabolic process",50]
["small molecule metabolic process",300]
["small nuclear ribonucleoprotein complex",13]
["small nucleolar ribonucleoprotein complex assembly",1]
["small ribosomal subunit",8]
["small ribosomal subunit rRNA binding",1]
["small RNA loading onto RISC",2]
["small-subunit processome",8]
["SMC loading complex",1]
["SMN complex",1]
["SMN-Sm protein complex",1]
["smoothened signaling pathway",1]
["SNAP receptor activity",4]
["SNARE binding",8]
["SNARE complex",7]
["sno(s)RNA 3'-end processing",5]
["sno(s)RNA metabolic process",8]
["sno(s)RNA polyadenylation",2]
["sno(s)RNA processing",6]
["sno(s)RNA-containing ribonucleoprotein complex",6]
["snoRNA binding",6]
["snoRNA guided rRNA pseudouridine synthesis",1]
["snoRNA release from pre-rRNA",1]
["snoRNA splicing",1]
["snRNA (adenine-N6)-methylation",1]
["snRNA 3'-end processing",4]
["snRNA binding",4]
["snRNA metabolic process",8]
["snRNA modification",3]
["snRNA processing",5]
["snRNA pseudouridine synthesis",2]
["snRNA stem-loop binding",1]
["socially cooperative development",5]
["sodium ion export across plasma membrane",1]
["sodium ion homeostasis",1]
["sodium ion import across plasma membrane",1]
["sodium ion transmembrane transport",5]
["sodium ion transmembrane transporter activity",5]
["sodium ion transport",6]
["soluble NSF attachment protein activity",1]
["solute:cation antiporter activity",6]
["solute:cation symporter activity",5]
["solute:proton antiporter activity",3]
["solute:proton symporter activity",5]
["somatic diversification of immune receptors",1]
["somatic diversification of immune receptors via somatic mutation",1]
["somatic diversification of immunoglobulins",1]
["somatic hypermutation of immunoglobulin genes",1]
["somatic stem cell division",1]
["somatodendritic compartment",4]
["sorocarp development",5]
["sorocarp morphogenesis",1]
["spanning component of membrane",1]
["spanning component of plasma membrane",1]
["specification of axis polarity",1]
["specification of floral organ identity",4]
["specification of floral organ number",1]
["specification of plant organ identity",4]
["specification of plant organ number",1]
["specification of symmetry",4]
["sperm axoneme assembly",1]
["sperm chromatin condensation",1]
["sperm motility",1]
["spermatid development",3]
["spermatid differentiation",3]
["spermatid nucleus differentiation",2]
["spermatid nucleus elongation",1]
["spermatogenesis",4]
["spermatogenesis- exchange of chromosomal proteins",1]
["spermine synthase activity",1]
["sphinganine biosynthetic process",2]
["sphinganine kinase activity",1]
["sphinganine metabolic process",2]
["sphingoid biosynthetic process",4]
["sphingoid catabolic process",1]
["sphingoid metabolic process",6]
["sphingolipid alpha-glucuronosyltransferase activity",1]
["sphingolipid binding",1]
["sphingolipid biosynthetic process",8]
["sphingolipid catabolic process",3]
["sphingolipid mediated signaling pathway",2]
["sphingolipid metabolic process",15]
["sphingolipid transporter activity",2]
["sphingomyelin biosynthetic process",2]
["sphingomyelin metabolic process",2]
["sphingomyelin transfer activity",1]
["sphingosine biosynthetic process",4]
["sphingosine metabolic process",4]
["sphingosine N-acyltransferase activity",1]
["sphingosine-1-phosphate phosphatase activity",1]
["sphingosine-1-phosphate receptor activity",1]
["sphingosine-1-phosphate receptor signaling pathway",3]
["spinal cord development",2]
["spinal cord dorsal/ventral patterning",1]
["spinal cord motor neuron differentiation",1]
["spinal cord patterning",1]
["spindle",21]
["spindle assembly",8]
["spindle assembly checkpoint signaling",5]
["spindle assembly involved in male meiosis",1]
["spindle assembly involved in meiosis",1]
["spindle checkpoint signaling",5]
["spindle disassembly",2]
["spindle localization",1]
["spindle matrix",1]
["spindle microtubule",8]
["spindle midzone",4]
["spindle organization",17]
["spindle pole",5]
["spindle pole body",2]
["spindle pole body duplication",1]
["spindle pole body organization",1]
["spleen development",1]
["spliceosomal complex",30]
["spliceosomal complex assembly",5]
["spliceosomal conformational changes to generate catalytic conformation",2]
["spliceosomal snRNP assembly",1]
["spliceosomal snRNP complex",12]
["spliceosomal tri-snRNP complex",3]
["spore germination",1]
["spore-bearing structure development",1]
["sporocarp development",1]
["sporocarp development involved in asexual reproduction",1]
["sporopollenin biosynthetic process",3]
["sporulation",5]
["sporulation resulting in formation of a cellular spore",2]
["SPOTS complex",1]
["squalene synthase activity",1]
["SRP-dependent cotranslational protein targeting to membrane",1]
["SRP-dependent cotranslational protein targeting to membrane- translocation",1]
["stabilization of membrane potential",1]
["stamen development",14]
["stamen filament development",2]
["stamen formation",1]
["stamen morphogenesis",1]
["starch binding",1]
["starch biosynthetic process",7]
["starch catabolic process",10]
["starch grain",3]
["starch metabolic process",19]
["starch synthase activity",2]
["stem cell differentiation",1]
["stem cell division",1]
["stem cell population maintenance",13]
["stem cell proliferation",2]
["stem vascular tissue pattern formation",1]
["stereocilium bundle",1]
["sterigmatocystin biosynthetic process",1]
["sterigmatocystin metabolic process",1]
["steroid binding",2]
["steroid biosynthetic process",13]
["steroid hormone mediated signaling pathway",6]
["steroid metabolic process",14]
["steroid receptor RNA activator RNA binding",1]
["sterol 14-demethylase activity",1]
["sterol 24-C-methyltransferase activity",1]
["sterol binding",1]
["sterol biosynthetic process",10]
["sterol delta7 reductase activity",1]
["sterol desaturase activity",2]
["sterol homeostasis",1]
["sterol metabolic process",12]
["sterol transport",1]
["sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity",1]
["stomatal closure",5]
["stomatal complex development",5]
["stomatal complex formation",1]
["stomatal complex morphogenesis",4]
["stomatal complex patterning",1]
["stomatal lineage progression",1]
["stomatal movement",11]
["stomatal opening",1]
["storage vacuole",7]
["strand invasion",5]
["stress granule assembly",2]
["stress response to cadmium ion",1]
["stress response to metal ion",1]
["stress-activated protein kinase signaling cascade",6]
["striated muscle cell development",1]
["striated muscle cell differentiation",2]
["striated muscle tissue development",2]
["strigolactone biosynthetic process",2]
["strigolactone metabolic process",2]
["stromal side of plastid thylakoid membrane",2]
["stromule",12]
["structural constituent of cytoskeleton",6]
["structural constituent of nuclear pore",4]
["structural constituent of ribosome",18]
["structural molecule activity",36]
["suberin biosynthetic process",6]
["suberin network",1]
["succinate dehydrogenase activity",1]
["succinate dehydrogenase complex",1]
["succinate dehydrogenase complex (ubiquinone)",1]
["succinate metabolic process",3]
["succinate-CoA ligase (ADP-forming) activity",1]
["succinate-CoA ligase activity",1]
["succinate-semialdehyde dehydrogenase (NAD+) activity",1]
["succinyl-CoA metabolic process",1]
["sucrose biosynthetic process",3]
["sucrose catabolic process",2]
["sucrose metabolic process",7]
["sucrose transmembrane transporter activity",1]
["sucrose transport",2]
["sugar mediated signaling pathway",13]
["sugar transmembrane transporter activity",7]
["sugar-phosphatase activity",4]
["sulfate adenylyltransferase (ATP) activity",1]
["sulfate adenylyltransferase activity",1]
["sulfate assimilation",4]
["sulfate assimilation- phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)",2]
["sulfate binding",1]
["sulfate ion homeostasis",2]
["sulfate reduction",3]
["sulfate transmembrane transport",2]
["sulfate transmembrane transporter activity",2]
["sulfate transport",2]
["sulfide oxidation",1]
["sulfide oxidation- using siroheme sulfite reductase",1]
["sulfite reductase (ferredoxin) activity",1]
["sulfite reductase activity",1]
["sulfolipid biosynthetic process",1]
["sulfolipid metabolic process",1]
["sulfotransferase activity",2]
["sulfur amino acid biosynthetic process",7]
["sulfur amino acid catabolic process",2]
["sulfur amino acid metabolic process",12]
["sulfur amino acid transmembrane transporter activity",1]
["sulfur amino acid transport",1]
["sulfur compound binding",4]
["sulfur compound biosynthetic process",24]
["sulfur compound catabolic process",8]
["sulfur compound metabolic process",54]
["sulfur compound transmembrane transporter activity",4]
["sulfur compound transport",6]
["sulfur dioxygenase activity",1]
["sulfurtransferase activity",7]
["SUMO activating enzyme activity",1]
["SUMO binding",1]
["SUMO ligase activity",2]
["SUMO transferase activity",3]
["superoxide dismutase activity",1]
["superoxide metabolic process",1]
["supramolecular complex",21]
["supramolecular fiber",18]
["supramolecular fiber organization",22]
["supramolecular polymer",18]
["suspensor development",1]
["SWI/SNF complex",4]
["SWI/SNF superfamily-type complex",9]
["Swr1 complex",1]
["symplast",123]
["symporter activity",6]
["synapse",8]
["synapse assembly",1]
["synapse organization",1]
["synaptic assembly at neuromuscular junction",1]
["synaptic membrane",3]
["synaptic signaling",2]
["synaptic vesicle",2]
["synaptic vesicle cycle",2]
["synaptic vesicle endocytosis",2]
["synaptic vesicle membrane",1]
["synaptic vesicle recycling",2]
["synaptonemal complex",2]
["synaptonemal structure",2]
["synergid death",1]
["syntaxin binding",3]
["system development",293]
["system process",7]
["systemic acquired resistance",11]
["systemic acquired resistance- salicylic acid mediated signaling pathway",5]
["T cell receptor signaling pathway",2]
["T-tubule",1]
["tail-anchored membrane protein insertion into ER membrane",2]
["TAT protein transport complex",1]
["taxis",10]
["TBP-class protein binding",1]
["telencephalon development",4]
["telomerase holoenzyme complex",1]
["telomerase holoenzyme complex assembly",1]
["telomerase inhibitor activity",1]
["telomerase RNA binding",2]
["telomerase RNA stabilization",1]
["telomere cap complex",1]
["telomere capping",3]
["telomere localization",1]
["telomere maintenance",12]
["telomere maintenance in response to DNA damage",3]
["telomere maintenance via recombination",1]
["telomere maintenance via semi-conservative replication",2]
["telomere maintenance via telomerase",4]
["telomere maintenance via telomere lengthening",4]
["telomere organization",12]
["telomere tethering at nuclear periphery",1]
["telomeric DNA binding",6]
["telomeric loop formation",1]
["temperature compensation of the circadian clock",1]
["terminal bouton",1]
["termination of RNA polymerase II transcription",3]
["terpene biosynthetic process",2]
["terpene catabolic process",2]
["terpene metabolic process",4]
["terpenoid biosynthetic process",21]
["terpenoid biosynthetic process- mevalonate-independent",1]
["terpenoid catabolic process",1]
["terpenoid metabolic process",28]
["terpenoid transport",1]
["tertiary alcohol biosynthetic process",1]
["tertiary alcohol metabolic process",1]
["tetrahydrobiopterin biosynthetic process",1]
["tetrahydrobiopterin metabolic process",1]
["tetrahydrofolate biosynthetic process",1]
["tetrahydrofolate metabolic process",2]
["tetrahydrofolylpolyglutamate biosynthetic process",2]
["tetrahydrofolylpolyglutamate metabolic process",2]
["tetrahydrofolylpolyglutamate synthase activity",2]
["tetraketide alpha-pyrone synthase activity",1]
["tetrapyrrole binding",7]
["tetrapyrrole biosynthetic process",15]
["tetrapyrrole catabolic process",4]
["tetrapyrrole metabolic process",20]
["tetraterpenoid biosynthetic process",10]
["tetraterpenoid catabolic process",1]
["tetraterpenoid metabolic process",15]
["TFIIB-class transcription factor binding",1]
["thermospermine synthase activity",1]
["thiamine biosynthetic process",4]
["thiamine diphosphate biosynthetic process",1]
["thiamine diphosphate metabolic process",1]
["thiamine diphosphokinase activity",1]
["thiamine metabolic process",5]
["thiamine salvage",1]
["thiamine-containing compound biosynthetic process",4]
["thiamine-containing compound metabolic process",5]
["thiamine-phosphate diphosphorylase activity",1]
["thiazole biosynthetic process",1]
["thiazole metabolic process",1]
["thioester biosynthetic process",3]
["thioester metabolic process",7]
["thiol-dependent deubiquitinase",4]
["thiolester hydrolase activity",4]
["thioredoxin-disulfide reductase activity",1]
["thiosulfate sulfurtransferase activity",1]
["THO complex",7]
["THO complex part of transcription export complex",1]
["threonine racemase activity",1]
["threonine-tRNA ligase activity",1]
["threonyl-tRNA aminoacylation",1]
["thylakoid",105]
["thylakoid light-harvesting complex",1]
["thylakoid lumen",17]
["thylakoid membrane",67]
["thylakoid membrane organization",12]
["thymidine kinase activity",1]
["thymidine metabolic process",1]
["thyroid hormone receptor binding",2]
["Tic complex",2]
["TIM23 mitochondrial import inner membrane translocase complex",4]
["tissue development",112]
["tissue homeostasis",1]
["tissue migration",1]
["tissue morphogenesis",6]
["tissue regeneration",1]
["tissue remodeling",1]
["Toc complex",1]
["TOC-TIC supercomplex I",2]
["tocopherol cyclase activity",1]
["tocopherol O-methyltransferase activity",1]
["tongue development",1]
["tongue morphogenesis",1]
["TOR complex",1]
["TOR signaling",3]
["TORC1 complex",1]
["toxin biosynthetic process",2]
["toxin catabolic process",1]
["toxin metabolic process",4]
["toxin transport",1]
["TPR domain binding",1]
["trachea development",1]
["tracheary element differentiation",2]
["trans-Golgi network",62]
["trans-Golgi network membrane",6]
["trans-Golgi network transport vesicle",3]
["trans-Golgi network transport vesicle membrane",1]
["trans-octaprenyltranstransferase activity",1]
["trans-synaptic signaling",2]
["transaminase activity",12]
["transcription by RNA polymerase I",1]
["transcription by RNA polymerase II",19]
["transcription by RNA polymerase III",1]
["transcription cis-regulatory region binding",18]
["transcription coactivator activity",6]
["transcription coregulator activity",13]
["transcription coregulator binding",2]
["transcription corepressor activity",6]
["transcription corepressor binding",2]
["transcription elongation factor complex",3]
["transcription elongation from RNA polymerase II promoter",3]
["transcription export complex",1]
["transcription export complex 2",1]
["transcription factor binding",14]
["transcription factor TFIID complex",2]
["transcription factor TFIIE complex",1]
["transcription factor TFIIH core complex",2]
["transcription factor TFIIH holo complex",4]
["transcription factor TFIIIB complex",1]
["transcription factor TFIIK complex",1]
["transcription initiation from RNA polymerase II promoter",5]
["transcription preinitiation complex assembly",1]
["transcription regulator activity",57]
["transcription regulator complex",27]
["transcription regulatory region nucleic acid binding",13]
["transcription repressor complex",9]
["transcription- DNA-templated",33]
["transcription-coupled nucleotide-excision repair",4]
["transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery",3]
["transcriptionally active chromatin",3]
["transcytosis",1]
["transferase activity",394]
["transferase activity- transferring alkyl or aryl (other than methyl) groups",24]
["transferase activity- transferring nitrogenous groups",12]
["transferase activity- transferring one-carbon groups",52]
["transferase activity- transferring phosphorus-containing groups",149]
["transferase activity- transferring sulphur-containing groups",10]
["transferase complex",93]
["transferase complex- transferring phosphorus-containing groups",29]
["transition metal ion binding",64]
["transition metal ion homeostasis",13]
["transition metal ion transmembrane transporter activity",11]
["transition metal ion transport",12]
["transketolase or transaldolase activity",3]
["translation",60]
["translation elongation factor activity",2]
["translation elongation factor binding",1]
["translation factor activity- RNA binding",12]
["translation initiation factor activity",4]
["translation initiation factor binding",4]
["translation preinitiation complex",2]
["translation regulator activity",1]
["translation reinitiation",1]
["translation release factor activity",5]
["translation release factor activity- codon nonspecific",1]
["translation release factor activity- codon specific",2]
["translation release factor complex",1]
["translation repressor activity",1]
["translation termination factor activity",5]
["translational elongation",3]
["translational initiation",13]
["translational termination",7]
["translesion synthesis",7]
["transmembrane receptor protein kinase activity",15]
["transmembrane receptor protein serine/threonine kinase activity",15]
["transmembrane receptor protein serine/threonine kinase signaling pathway",15]
["transmembrane receptor protein tyrosine kinase signaling pathway",1]
["transmembrane signaling receptor activity",19]
["transmembrane transport",163]
["transmembrane transporter activity",139]
["transmembrane transporter complex",1]
["transpiration",1]
["transport",333]
["transport along microtubule",5]
["transport of virus",1]
["transport of virus in host- cell to cell",1]
["transport of virus in multicellular host",1]
["transport vesicle",8]
["transport vesicle membrane",5]
["transporter activity",172]
["transporter complex",2]
["transsulfuration",1]
["TRAPP complex",1]
["traversing start control point of mitotic cell cycle",1]
["trehalase activity",2]
["trehalose biosynthetic process",1]
["trehalose catabolic process",2]
["trehalose metabolic process",3]
["trehalose metabolism in response to stress",1]
["tricarboxylic acid cycle",6]
["tricarboxylic acid cycle enzyme complex",2]
["tricarboxylic acid metabolic process",7]
["tricarboxylic acid transmembrane transport",2]
["tricarboxylic acid transmembrane transporter activity",2]
["tricarboxylic acid transport",2]
["trichoblast differentiation",19]
["trichoblast maturation",18]
["trichome branching",5]
["trichome differentiation",16]
["trichome morphogenesis",14]
["trichome papilla formation",1]
["triglyceride biosynthetic process",3]
["triglyceride catabolic process",2]
["triglyceride homeostasis",1]
["triglyceride lipase activity",3]
["triglyceride metabolic process",5]
["triose-phosphate isomerase activity",1]
["tripeptide transmembrane transport",1]
["tripeptide transport",2]
["triphosphatase activity",1]
["trivalent inorganic anion homeostasis",2]
["tRNA (guanine-N7-)-methyltransferase activity",1]
["tRNA (guanine-N7)-methylation",1]
["tRNA (guanine) methyltransferase activity",1]
["tRNA (m1A) methyltransferase complex",2]
["tRNA 3'-end processing",1]
["tRNA 3'-trailer cleavage",1]
["tRNA 3'-trailer cleavage- endonucleolytic",1]
["tRNA 5'-end processing",1]
["tRNA 5'-leader removal",1]
["tRNA A64-2'-O-ribosylphosphate transferase activity",1]
["tRNA acetylation",1]
["tRNA aminoacylation",17]
["tRNA aminoacylation for mitochondrial protein translation",1]
["tRNA aminoacylation for protein translation",16]
["tRNA binding",7]
["tRNA catabolic process",3]
["tRNA dihydrouridine synthase activity",1]
["tRNA dihydrouridine synthesis",1]
["tRNA dimethylallyltransferase activity",1]
["tRNA export from nucleus",1]
["tRNA metabolic process",40]
["tRNA methylation",3]
["tRNA methylthiolation",1]
["tRNA methyltransferase activity",1]
["tRNA methyltransferase complex",3]
["tRNA modification",18]
["tRNA N-acetyltransferase activity",1]
["tRNA processing",21]
["tRNA pseudouridine synthesis",5]
["tRNA re-export from nucleus",1]
["tRNA splicing- via endonucleolytic cleavage and ligation",1]
["tRNA thio-modification",1]
["tRNA threonylcarbamoyladenosine metabolic process",3]
["tRNA threonylcarbamoyladenosine modification",2]
["tRNA transport",1]
["tRNA wobble base modification",3]
["tRNA wobble cytosine modification",1]
["tRNA wobble position uridine thiolation",1]
["tRNA wobble uridine modification",2]
["tRNA-containing ribonucleoprotein complex export from nucleus",1]
["tRNA-guanine transglycosylation",1]
["trophectodermal cell differentiation",1]
["tropism",9]
["tryptophan biosynthetic process",2]
["tryptophan catabolic process",2]
["tryptophan metabolic process",4]
["tryptophan synthase activity",1]
["tube development",10]
["tube formation",1]
["tube morphogenesis",5]
["tubular endosome",1]
["tubulin binding",21]
["tubulin complex assembly",2]
["tyrosine binding",1]
["tyrosine biosynthetic process",2]
["tyrosine catabolic process",2]
["tyrosine metabolic process",6]
["tyrosine-tRNA ligase activity",2]
["tyrosyl-DNA phosphodiesterase activity",1]
["tyrosyl-tRNA aminoacylation",1]
["U1 snRNA 3'-end processing",2]
["U1 snRNA binding",2]
["U1 snRNP",5]
["U11/U12 snRNP",1]
["U12-type spliceosomal complex",4]
["U2 snRNP",1]
["U2-type catalytic step 1 spliceosome",1]
["U2-type catalytic step 2 spliceosome",1]
["U2-type precatalytic spliceosome",1]
["U2-type prespliceosome",5]
["U2-type spliceosomal complex",11]
["U2AF complex",3]
["U3 snoRNA binding",1]
["U4 snRNA 3'-end processing",4]
["U4/U6 x U5 tri-snRNP complex",3]
["U5 snRNA 3'-end processing",2]
["U5 snRNP",3]
["U6 snRNA (adenine-(43)-N(6))-methyltransferase activity",1]
["U6 snRNA 3'-end binding",1]
["U6 snRNA binding",1]
["ubiquinol-cytochrome-c reductase activity",1]
["ubiquinone binding",1]
["ubiquinone biosynthetic process",4]
["ubiquinone biosynthetic process via 3-4-dihydroxy-5-polyprenylbenzoate",1]
["ubiquinone metabolic process",4]
["ubiquinone-6 biosynthetic process",1]
["ubiquinone-6 metabolic process",1]
["ubiquitin binding",6]
["ubiquitin conjugating enzyme binding",4]
["ubiquitin ligase complex",36]
["ubiquitin modification-dependent histone binding",1]
["ubiquitin protein ligase activity",27]
["ubiquitin protein ligase binding",18]
["ubiquitin-dependent ERAD pathway",10]
["ubiquitin-dependent protein binding",1]
["ubiquitin-dependent protein catabolic process",50]
["ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",4]
["ubiquitin-like modifier activating enzyme activity",4]
["ubiquitin-like protein binding",7]
["ubiquitin-like protein conjugating enzyme binding",4]
["ubiquitin-like protein ligase activity",29]
["ubiquitin-like protein ligase binding",18]
["ubiquitin-like protein transferase activity",47]
["ubiquitin-like protein-specific protease activity",4]
["ubiquitin-protein transferase activator activity",1]
["ubiquitin-protein transferase activity",43]
["ubiquitin-protein transferase regulator activity",1]
["ubiquitin-specific protease binding",3]
["ubiquitin-ubiquitin ligase activity",2]
["ubiquitination-like modification-dependent protein binding",1]
["UDP-arabinose 4-epimerase activity",1]
["UDP-D-galactose metabolic process",1]
["UDP-galactose transmembrane transport",5]
["UDP-galactose transmembrane transporter activity",5]
["UDP-galactose:N-glycan beta-1-3-galactosyltransferase activity",1]
["UDP-galactosyltransferase activity",6]
["UDP-glucose metabolic process",4]
["UDP-glucose transmembrane transport",4]
["UDP-glucose transmembrane transporter activity",4]
["UDP-glucose:glycoprotein glucosyltransferase activity",1]
["UDP-glucosylation",1]
["UDP-glucosyltransferase activity",6]
["UDP-glucuronate decarboxylase activity",2]
["UDP-glucuronate metabolic process",1]
["UDP-glycosyltransferase activity",27]
["UDP-L-arabinose metabolic process",1]
["UDP-N-acetylgalactosamine diphosphorylase activity",1]
["UDP-N-acetylgalactosamine metabolic process",1]
["UDP-N-acetylgalactosamine transmembrane transport",1]
["UDP-N-acetylgalactosamine transmembrane transporter activity",1]
["UDP-N-acetylglucosamine biosynthetic process",2]
["UDP-N-acetylglucosamine diphosphorylase activity",1]
["UDP-N-acetylglucosamine metabolic process",2]
["UDP-N-acetylglucosamine transmembrane transport",1]
["UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity",1]
["UDP-xylosyltransferase activity",3]
["UFM1 hydrolase activity",1]
["UFM1 transferase activity",1]
["UMP biosynthetic process",3]
["UMP metabolic process",3]
["unfolded protein binding",12]
["unidimensional cell growth",38]
["unsaturated fatty acid biosynthetic process",3]
["unsaturated fatty acid metabolic process",5]
["uracil catabolic process",3]
["uracil metabolic process",3]
["urate oxidase activity",1]
["urea cycle",2]
["urea metabolic process",2]
["urea transmembrane transport",2]
["urea transmembrane transporter activity",2]
["urea transport",2]
["ureide catabolic process",4]
["ureide metabolic process",4]
["ureidoglycine aminohydrolase activity",1]
["ureidoglycolate hydrolase activity",1]
["uridine kinase activity",3]
["uridine-diphosphatase activity",1]
["uridylyltransferase activity",6]
["urogenital system development",2]
["uropod",1]
["uropod organization",1]
["uropod retraction",1]
["UTP-monosaccharide-1-phosphate uridylyltransferase activity",3]
["UTP:arabinose-1-phosphate uridylyltransferase activity",1]
["UTP:galactose-1-phosphate uridylyltransferase activity",1]
["UTP:glucose-1-phosphate uridylyltransferase activity",3]
["UTP:xylose-1-phosphate uridylyltransferase activity",1]
["UV-damage excision repair",3]
["vacuolar acidification",3]
["vacuolar lumen",5]
["vacuolar membrane",101]
["vacuolar protein processing",2]
["vacuolar proton-transporting V-type ATPase complex",2]
["vacuolar proton-transporting V-type ATPase- V1 domain",1]
["vacuolar transmembrane transport",2]
["vacuolar transport",33]
["vacuole",149]
["vacuole fusion",4]
["vacuole fusion- non-autophagic",4]
["vacuole inheritance",1]
["vacuole organization",26]
["vacuole-mitochondrion membrane contact site",1]
["valine biosynthetic process",2]
["valine metabolic process",2]
["valine-tRNA ligase activity",2]
["valyl-tRNA aminoacylation",2]
["vascular transport",2]
["vasculature development",3]
["vasculogenesis",1]
["VCP-NPL4-UFD1 AAA ATPase complex",1]
["VCP-NSFL1C complex",1]
["vegetative phase change",2]
["vegetative to reproductive phase transition of meristem",23]
["ventral spinal cord development",1]
["very long-chain fatty acid biosynthetic process",4]
["very long-chain fatty acid metabolic process",5]
["vesicle",119]
["vesicle budding from membrane",3]
["vesicle cargo loading",2]
["vesicle coat",5]
["vesicle docking",5]
["vesicle docking involved in exocytosis",2]
["vesicle fusion",9]
["vesicle fusion with Golgi apparatus",1]
["vesicle fusion with vacuole",1]
["vesicle localization",2]
["vesicle lumen",1]
["vesicle membrane",12]
["vesicle organization",17]
["vesicle targeting",2]
["vesicle tethering complex",15]
["vesicle-mediated transport",77]
["vesicle-mediated transport between endosomal compartments",3]
["vesicle-mediated transport in synapse",2]
["vesicle-mediated transport to the plasma membrane",7]
["violaxanthin de-epoxidase activity",1]
["viral gene expression",1]
["viral genome replication",2]
["viral life cycle",3]
["viral process",9]
["viral release from host cell",1]
["viral replication complex",1]
["viral RNA genome replication",1]
["viral translation",1]
["visual perception",1]
["vitamin B6 binding",7]
["vitamin B6 biosynthetic process",3]
["vitamin B6 metabolic process",3]
["vitamin binding",8]
["vitamin biosynthetic process",22]
["vitamin E biosynthetic process",4]
["vitamin E metabolic process",4]
["vitamin K biosynthetic process",1]
["vitamin K metabolic process",1]
["vitamin metabolic process",24]
["vitamin transmembrane transport",2]
["vitamin transmembrane transporter activity",2]
["vitamin transport",2]
["vitellogenesis",1]
["voltage-gated anion channel activity",3]
["voltage-gated cation channel activity",5]
["voltage-gated channel activity",8]
["voltage-gated chloride channel activity",2]
["voltage-gated ion channel activity",8]
["voltage-gated potassium channel activity",5]
["vulval development",1]
["water channel activity",1]
["water homeostasis",3]
["water transmembrane transporter activity",1]
["water transport",3]
["water-soluble vitamin biosynthetic process",17]
["water-soluble vitamin metabolic process",19]
["wax biosynthetic process",5]
["wax metabolic process",5]
["wing disc development",2]
["wing disc dorsal/ventral pattern formation",1]
["wing disc pattern formation",1]
["Wnt receptor catabolic process",1]
["Wnt signaling pathway",3]
["Wnt signaling pathway- planar cell polarity pathway",1]
["wound healing",6]
["xanthophyll biosynthetic process",3]
["xanthophyll catabolic process",1]
["xanthophyll cycle",2]
["xanthophyll metabolic process",7]
["xenobiotic transmembrane transporter activity",16]
["XPC complex",2]
["xylan 1-4-beta-xylosidase activity",2]
["xylan acetylation",1]
["xylan biosynthetic process",4]
["xylan catabolic process",2]
["xylan metabolic process",6]
["xylanase activity",2]
["xylem and phloem pattern formation",12]
["xylem development",5]
["xylem vessel member cell differentiation",1]
["xylogalacturonan metabolic process",1]
["xyloglucan biosynthetic process",1]
["xyloglucan metabolic process",2]
["xylosyltransferase activity",4]
["xylulokinase activity",1]
["xylulose metabolic process",1]
["Y-form DNA binding",1]
["yeast-form cell wall",1]
["Z disc",1]
["zeaxanthin epoxidase [overall] activity",1]
["zeaxanthin epoxidase activity",1]
["zinc ion binding",30]
["zinc ion homeostasis",2]
["zinc ion transmembrane transport",3]
["zinc ion transmembrane transporter activity",3]
["zinc ion transport",4]
["zygote asymmetric cell division",2]
["zygote asymmetric cytokinesis in embryo sac",2]
["zymogen binding",1]

{"sheet":"Table_S6","index":5,"n_rows":27,"n_cols":4,"rows_kept":27}
["Supplementary Table 6 – KEGG  annotation of key gene families lost in the Zygnematales"]
[]
["Gene Family ","Function ","KEGG","Functional annotation "]
[2766,"Cytoskeleton ","K10390","tubulin delta"]
[9603,"Cytoskeleton ","K10398","kinesin family member 11 - KIF11, EG5"]
[13257,"Cytoskeleton ","K10401","kinesin family member 18/19"]
[15825,"Cytoskeleton ","K10410","dynein axonemal light intermediate chain 1"]
[13427,"Cytoskeleton ","K10418","dynein light chain LC8-type"]
[355,"Cytoskeleton ","K16569","gamma-tubulin complex component 2"]
[14081,"Cytoskeleton ","K16616","actin-related protein 8, plant"]
[19899,"Cytoskeleton ","K19756","radial spoke head protein 4/6"]
[14276,"Exosome","K00036","glucose-6-phosphate 1-dehydrogenase"]
[8898,"Exosome","K02183","calmodulin"]
[7305,"Exosome","K03841","fructose-1,6-bisphosphatase I"]
[14809,"Exosome","K04382","serine/threonine-protein phosphatase 2A catalytic subunit"]
[5927,"Exosome","K05658","ATP-binding cassette, subfamily B (MDR/TAP), member 1"]
[6823,"Exosome","K05681","ATP-binding cassette, subfamily G (WHITE)"]
[10546,"Exosome","K07897","Ras-related protein Rab-7A"]
[11422,"Exosome","K12185","ESCRT-I complex subunit VPS37"]
[2958,"Exosome","K15377","solute carrier family 44 (choline transporter-like protein), member 2/4/5"]
[355,"Exosome","K16569","gamma-tubulin complex component 2"]
[8035,"Exosome","K17278","membrane-associated progesterone receptor component"]
[10736,"Phenylpropanoid biosynthesis ","K00083","cinnamyl-alcohol dehydrogenase"]
[10165,"Phenylpropanoid biosynthesis ","K00430","peroxidase"]
[15412,"Phenylpropanoid biosynthesis ","K00430","Taurine and hypotaurine metabolism"]
[61,"Phenylpropanoid biosynthesis ","K00430","peroxidase"]
[15787,"Phenylpropanoid biosynthesis ","K00487","trans-cinnamate 4-monooxygenase"]

{"sheet":"Table_S7","index":6,"n_rows":8044,"n_cols":2,"rows_kept":8044,"merged":[[0,0,0,4]]}
["Supplementary Table 7 – Frequency of GO terms at ancestral bryophyte node "]
["GO at "]
["GO_term ","Frequency"]
["'de novo' AMP biosynthetic process",1]
["'de novo' GDP-L-fucose biosynthetic process",1]
["'de novo' IMP biosynthetic process",1]
["'de novo' L-methionine biosynthetic process",1]
["'de novo' NAD biosynthetic process",1]
["'de novo' NAD biosynthetic process from aspartate",1]
["'de novo' posttranslational protein folding",3]
["'de novo' protein folding",12]
["'de novo' pyrimidine nucleobase biosynthetic process",1]
["(+)-abscisic acid 8'-hydroxylase activity",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transport",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity",1]
["(1->3)-beta-D-glucan catabolic process",1]
["(1->3)-beta-D-glucan metabolic process",1]
["(R)-2-hydroxyglutarate dehydrogenase activity",1]
["(S)-2-hydroxy-acid oxidase activity",1]
["[2Fe-2S] cluster assembly",1]
["[myelin basic protein]-arginine N-methyltransferase activity",2]
["[pyruvate kinase]-phosphatase activity",1]
["1-2-alpha-L-fucosidase activity",1]
["1-4-alpha-glucan branching enzyme activity",1]
["1-4-alpha-oligoglucan phosphorylase activity",2]
["1-4-beta-D-xylan synthase activity",1]
["1-4-dihydroxy-2-naphthoate octaprenyltransferase activity",1]
["1-acylglycerophosphocholine O-acyltransferase activity",2]
["1-deoxy-D-xylulose-5-phosphate reductoisomerase activity",1]
["1-deoxy-D-xylulose-5-phosphate synthase activity",1]
["1-phosphatidylinositol 4-kinase activity",1]
["1-pyrroline-5-carboxylate dehydrogenase activity",1]
["2 iron- 2 sulfur cluster binding",1]
["2-3-bisphosphoglycerate-independent phosphoglycerate mutase activity",1]
["2-acylglycerol O-acyltransferase activity",1]
["2-alkenal reductase (NADP+) activity",1]
["2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity",1]
["2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity",1]
["2-carboxy-D-arabinitol-1-phosphatase activity",1]
["2-hydroxyglutarate dehydrogenase activity",1]
["2-oxoglutarate metabolic process",2]
["2-oxoglutarate-dependent dioxygenase activity",3]
["2'-deoxyribonucleotide metabolic process",1]
["23S rRNA (adenine(1618)-N(6))-methyltransferase activity",1]
["3-4-dihydroxy-2-butanone-4-phosphate synthase activity",1]
["3-8-divinyl protochlorophyllide a 8-vinyl reductase activity",1]
["3-chloroallyl aldehyde dehydrogenase activity",1]
["3-hydroxyacyl-CoA dehydratase activity",1]
["3-hydroxyacyl-CoA dehydrogenase activity",2]
["3-hydroxybutyrate dehydrogenase activity",1]
["3-hydroxybutyryl-CoA epimerase activity",1]
["3-isopropylmalate dehydratase activity",1]
["3-isopropylmalate dehydrogenase activity",1]
["3-keto-sphinganine metabolic process",1]
["3-mercaptopyruvate sulfurtransferase activity",1]
["3-methyl-2-oxobutanoate hydroxymethyltransferase activity",1]
["3-methylbut-2-enoyl-CoA(4-) metabolic process",1]
["3-oxoacyl-[acyl-carrier-protein] synthase activity",2]
["3-phosphoshikimate 1-carboxyvinyltransferase activity",1]
["3'-5' DNA helicase activity",7]
["3'-5' exonuclease activity",13]
["3'-5' RNA helicase activity",2]
["3'-5'-exodeoxyribonuclease activity",2]
["3'-5'-exoribonuclease activity",9]
["3'-flap endonuclease activity",1]
["3'-phospho-5'-adenylyl sulfate transmembrane transport",1]
["3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity",1]
["3'-phosphoadenosine 5'-phosphosulfate transport",1]
["3'-tRNA processing endoribonuclease activity",1]
["3'-tyrosyl-DNA phosphodiesterase activity",1]
["3'-UTR-mediated mRNA stabilization",1]
["3'(2')-5'-bisphosphate nucleotidase activity",2]
["4 iron- 4 sulfur cluster binding",2]
["4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity",1]
["4-4-dimethyl-9beta-19-cyclopropylsterol oxidation",1]
["4-6-pyruvylated galactose residue biosynthetic process",1]
["4-alpha-glucanotransferase activity",1]
["4-alpha-methyl-delta7-sterol oxidation",1]
["4-aminobutyrate transaminase activity",1]
["4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity",1]
["4-hydroxyproline metabolic process",1]
["5-amino-6-(5-phosphoribosylamino)uracil reductase activity",1]
["5-formyltetrahydrofolate transmembrane transporter activity",1]
["5-formyltetrahydrofolate transport",1]
["5-methyltetrahydrofolate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity",1]
["5-phosphoribose 1-diphosphate biosynthetic process",1]
["5-phosphoribose 1-diphosphate metabolic process",1]
["5'-3' DNA helicase activity",6]
["5'-3' exodeoxyribonuclease activity",2]
["5'-3' exonuclease activity",6]
["5'-3' RNA helicase activity",4]
["5'-3' RNA polymerase activity",2]
["5'-flap endonuclease activity",2]
["6-phosphofructokinase activity",2]
["7-8-dihydroneopterin 3'-triphosphate biosynthetic process",1]
["7-methylguanosine mRNA capping",1]
["7-methylguanosine RNA capping",1]
["7S RNA binding",1]
["8-oxo-dGDP phosphatase activity",1]
["9-15-9'-tri-cis-zeta-carotene isomerase activity",1]
["9-9'-di-cis-zeta-carotene desaturation to 7-9-7'-9'-tetra-cis-lycopene",1]
["9-9'-dicis-carotene:quinone oxidoreductase activity",1]
["9-cis-epoxycarotenoid dioxygenase activity",2]
["9+0 non-motile cilium",1]
["9+2 non-motile cilium",1]
["90S preribosome",9]
["A2A adenosine receptor binding",1]
["ABC-type peptide transporter activity",2]
["ABC-type protein transporter activity",2]
["abscisic acid binding",2]
["abscisic acid biosynthetic process",1]
["abscisic acid metabolic process",1]
["abscisic acid transmembrane transporter activity",1]
["abscisic acid transport",1]
["abscisic acid-activated signaling pathway",10]
["abscission",2]
["acceptance of pollen",2]
["acetate metabolic process",2]
["acetate-CoA ligase activity",2]
["acetolactate synthase activity",2]
["acetolactate synthase complex",1]
["acetyl-CoA biosynthetic process",2]
["acetyl-CoA biosynthetic process from pyruvate",1]
["acetyl-CoA carboxylase activity",1]
["acetyl-CoA metabolic process",3]
["acetyl-CoA:L-glutamate N-acetyltransferase activity",1]
["acetylation-dependent protein binding",2]
["acetylglucosaminyltransferase activity",3]
["acetylglutamate kinase regulator activity",1]
["acetylpyruvate hydrolase activity",1]
["acetyltransferase activity",12]
["acetyltransferase complex",4]
["ACF complex",1]
["acid phosphatase activity",5]
["acid secretion",1]
["acid-amino acid ligase activity",3]
["acid-thiol ligase activity",6]
["acidic amino acid transmembrane transporter activity",1]
["acidic amino acid transport",1]
["acrosomal membrane",1]
["acrosomal vesicle",1]
["actin binding",6]
["actin cortical patch",1]
["actin cortical patch localization",1]
["actin cytoskeleton",8]
["actin cytoskeleton organization",10]
["actin filament",1]
["actin filament binding",3]
["actin filament bundle assembly",1]
["actin filament bundle organization",1]
["actin filament capping",1]
["actin filament organization",9]
["actin filament polymerization",1]
["actin filament-based movement",1]
["actin filament-based process",14]
["actin filament-based transport",1]
["actin fusion focus",1]
["actin nucleation",4]
["actin polymerization or depolymerization",2]
["Actinobacterium-type cell wall biogenesis",1]
["action potential",1]
["activation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["activation of GTPase activity",7]
["activation of immune response",14]
["activation of innate immune response",12]
["activation of MAPK activity",2]
["activation of MAPKK activity",2]
["activation of phospholipase C activity",1]
["activation of phospholipase D activity",1]
["activation of protein kinase activity",8]
["active ion transmembrane transporter activity",5]
["active transmembrane transporter activity",52]
["acyl carnitine transmembrane transport",1]
["acyl carnitine transmembrane transporter activity",1]
["acyl carnitine transport",1]
["acyl-[acyl-carrier-protein] hydrolase activity",1]
["acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity",1]
["acyl-CoA biosynthetic process",3]
["acyl-CoA dehydrogenase activity",5]
["acyl-CoA metabolic process",7]
["acyl-CoA oxidase activity",3]
["acylglycerol biosynthetic process",4]
["acylglycerol catabolic process",3]
["acylglycerol homeostasis",1]
["acylglycerol lipase activity",2]
["acylglycerol metabolic process",7]
["acylglycerol O-acyltransferase activity",1]
["acyltransferase activity",36]
["acyltransferase activity- transferring groups other than amino-acyl groups",30]
["acyltransferase- acyl groups converted into alkyl on transfer",3]
["adaxial/abaxial axis specification",1]
["adaxial/abaxial pattern specification",2]
["adenine biosynthetic process",1]
["adenine metabolic process",1]
["adenine nucleotide transmembrane transporter activity",8]
["adenine nucleotide transport",9]
["adenine phosphoribosyltransferase activity",1]
["adenine salvage",1]
["adenosine 3'-5'-bisphosphate transmembrane transport",1]
["adenosine 3'-5'-bisphosphate transmembrane transporter activity",1]
["adenosine receptor binding",1]
["adenosylmethionine-8-amino-7-oxononanoate transaminase activity",1]
["adenyl nucleotide binding",41]
["adenyl ribonucleotide binding",41]
["adenylate cyclase binding",1]
["adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway",1]
["adenylate cyclase-modulating G protein-coupled receptor signaling pathway",3]
["adenylate kinase activity",3]
["adenylosuccinate synthase activity",1]
["adenylyl-sulfate reductase activity",1]
["adenylylsulfate kinase activity",2]
["adenylyltransferase activity",9]
["adhesion of symbiont to host",1]
["adhesion of symbiont to host cell",1]
["adhesion of symbiont to host epithelial cell",1]
["ADP binding",2]
["ADP metabolic process",9]
["ADP transmembrane transporter activity",6]
["ADP transport",7]
["ADP-ribose pyrophosphohydrolase activity",1]
["ADP-sugar diphosphatase activity",1]
["adult behavior",1]
["adult locomotory behavior",1]
["aerobic electron transport chain",1]
["aerobic respiration",10]
["aggregation involved in sorocarp development",2]
["aggregation of unicellular organisms",2]
["aggresome assembly",1]
["aging",19]
["agmatinase activity",1]
["agmatine deiminase activity",1]
["alanine catabolic process",1]
["alanine metabolic process",2]
["alanine-glyoxylate transaminase activity",2]
["alanine-oxo-acid transaminase activity",2]
["alanine-tRNA ligase activity",1]
["alanyl-tRNA aminoacylation",1]
["alcohol binding",5]
["alcohol biosynthetic process",14]
["alcohol catabolic process",6]
["alcohol metabolic process",23]
["alcohol transmembrane transporter activity",3]
["aldehyde biosynthetic process",4]
["aldehyde catabolic process",3]
["aldehyde dehydrogenase (NAD+) activity",3]
["aldehyde dehydrogenase (NADP+) activity",1]
["aldehyde-lyase activity",3]
["alditol biosynthetic process",1]
["alditol catabolic process",2]
["alditol metabolic process",4]
["alditol phosphate metabolic process",2]
["aldo-keto reductase (NADP) activity",1]
["aldonate transmembrane transport",1]
["aldonate transmembrane transporter activity",1]
["alkali metal ion binding",1]
["alkaloid metabolic process",1]
["alkane 1-monooxygenase activity",1]
["alkane biosynthetic process",2]
["alkene binding",2]
["alkene biosynthetic process",1]
["alkylthioltransferase activity",1]
["allantoate deiminase activity",1]
["allantoin catabolic process",4]
["allantoin metabolic process",4]
["allantoinase activity",1]
["alpha DNA polymerase:primase complex",1]
["alpha-(1->3)-fucosyltransferase activity",1]
["alpha-1-2-mannosyltransferase activity",2]
["alpha-1-3-glucosidase activity",1]
["alpha-1-3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-1-6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-alpha-trehalase activity",2]
["alpha-alpha-trehalose-phosphate synthase (UDP-forming) activity",1]
["alpha-amino acid biosynthetic process",32]
["alpha-amino acid catabolic process",14]
["alpha-amino acid metabolic process",54]
["alpha-amylase activity",1]
["alpha-galactosidase activity",1]
["alpha-glucosidase activity",1]
["alpha-ketoglutarate transmembrane transporter activity",1]
["alpha-ketoglutarate transport",2]
["alpha-L-arabinofuranosidase activity",1]
["alpha-L-fucosidase activity",1]
["alpha-mannosidase activity",5]
["alpha-tubulin binding",2]
["alternative oxidase activity",1]
["alveolar lamellar body",1]
["ameboidal-type cell migration",1]
["amide binding",17]
["amide biosynthetic process",76]
["amide transmembrane transporter activity",9]
["amide transport",100]
["amidine-lyase activity",1]
["amidophosphoribosyltransferase activity",1]
["amine biosynthetic process",7]
["amine catabolic process",3]
["amine metabolic process",14]
["amino acid activation",17]
["amino acid binding",3]
["amino acid homeostasis",1]
["amino acid kinase activity",2]
["amino acid salvage",1]
["amino acid transmembrane transport",13]
["amino acid transmembrane transporter activity",13]
["amino acid transport",13]
["amino sugar biosynthetic process",2]
["amino sugar catabolic process",1]
["amino sugar metabolic process",5]
["amino-acid racemase activity",1]
["aminoacyl-tRNA hydrolase activity",1]
["aminoacyl-tRNA ligase activity",16]
["aminoacyl-tRNA synthetase multienzyme complex",3]
["aminoacyltransferase activity",3]
["aminoglycan catabolic process",2]
["aminoglycan metabolic process",2]
["aminopeptidase activity",7]
["ammeline aminohydrolase activity",1]
["ammonia assimilation cycle",2]
["ammonia-lyase activity",2]
["ammonium homeostasis",1]
["ammonium ion binding",2]
["ammonium ion metabolic process",12]
["ammonium transmembrane transport",4]
["ammonium transmembrane transporter activity",4]
["ammonium transport",5]
["AMP binding",1]
["AMP biosynthetic process",1]
["AMP metabolic process",1]
["AMP transmembrane transporter activity",1]
["AMP transport",1]
["amylase activity",1]
["amylopectin binding",1]
["amylopectin biosynthetic process",4]
["amylopectin metabolic process",4]
["amyloplast",9]
["amyloplast organization",1]
["anaerobic respiration",1]
["anaphase-promoting complex",3]
["anaphase-promoting complex-dependent catabolic process",1]
["anastral spindle assembly",1]
["anastral spindle assembly involved in male meiosis",1]
["anatomical structure arrangement",10]
["anatomical structure development",419]
["anatomical structure formation involved in morphogenesis",48]
["anatomical structure homeostasis",15]
["anatomical structure maturation",22]
["anatomical structure morphogenesis",161]
["anchored component of membrane",8]
["anchored component of plasma membrane",6]
["anchored component of synaptic vesicle membrane",1]
["androecium development",12]
["androgen receptor binding",1]
["animal organ development",23]
["animal organ formation",1]
["animal organ morphogenesis",5]
["anion binding",103]
["anion channel activity",5]
["anion homeostasis",7]
["anion transmembrane transport",63]
["anion transmembrane transporter activity",57]
["anion transport",70]
["anion:anion antiporter activity",3]
["anisotropic cell growth",1]
["annealing activity",1]
["annealing helicase activity",1]
["annulate lamellae",1]
["anterior/posterior pattern specification",1]
["anterograde axonal transport",2]
["anterograde trans-synaptic signaling",2]
["anther dehiscence",4]
["anther development",7]
["anther wall tapetum development",1]
["anthocyanin accumulation in tissues in response to UV light",1]
["anthocyanin-containing compound biosynthetic process",3]
["anthocyanin-containing compound metabolic process",6]
["antibiotic biosynthetic process",3]
["antibiotic catabolic process",7]
["antibiotic metabolic process",18]
["antifungal innate immune response",1]
["antigen processing and presentation",5]
["antigen processing and presentation of exogenous antigen",4]
["antigen processing and presentation of exogenous peptide antigen",4]
["antigen processing and presentation of exogenous peptide antigen via MHC class II",4]
["antigen processing and presentation of peptide antigen",5]
["antigen processing and presentation of peptide antigen via MHC class II",5]
["antigen processing and presentation of peptide or polysaccharide antigen via MHC class II",5]
["antigen receptor-mediated signaling pathway",2]
["antioxidant activity",11]
["antiporter activity",23]
["antisense RNA metabolic process",2]
["AP-1 adaptor complex",1]
["AP-2 adaptor complex",1]
["AP-4 adaptor complex",3]
["AP-type membrane coat adaptor complex",5]
["apical part of cell",1]
["apical plasma membrane",1]
["apical protein localization",1]
["apocarotenoid biosynthetic process",1]
["apocarotenoid metabolic process",1]
["apolipoprotein B mRNA editing enzyme complex",1]
["apoplast",40]
["apoptotic cell clearance",2]
["apoptotic mitochondrial changes",1]
["apoptotic process",6]
["apoptotic process involved in development",1]
["apoptotic signaling pathway",1]
["appendage development",4]
["appendage morphogenesis",4]
["arabinogalactan protein metabolic process",3]
["arabinose biosynthetic process",1]
["arabinose metabolic process",1]
["arachidonate transport",1]
["arachidonic acid metabolic process",2]
["arachidonic acid secretion",1]
["arbuscular mycorrhizal association",2]
["arginase activity",1]
["arginine biosynthetic process",4]
["arginine biosynthetic process via ornithine",1]
["arginine catabolic process",1]
["arginine decarboxylase activity",1]
["arginine metabolic process",5]
["arginine N-methyltransferase activity",6]
["arginine transmembrane transport",1]
["arginine transmembrane transporter activity",1]
["arginine transport",1]
["arginine-tRNA ligase activity",1]
["argininosuccinate lyase activity",1]
["argininosuccinate metabolic process",1]
["argininosuccinate synthase activity",1]
["arginyl-tRNA aminoacylation",1]
["aromatic amino acid family biosynthetic process",6]
["aromatic amino acid family biosynthetic process- prephenate pathway",3]
["aromatic amino acid family catabolic process",4]
["aromatic amino acid family metabolic process",11]
["aromatic amino acid transmembrane transporter activity",1]
["aromatic amino acid transport",1]
["aromatic compound biosynthetic process",146]
["aromatic compound catabolic process",65]
["Arp2/3 protein complex",2]
["arsenate ion transmembrane transport",3]
["arsenate ion transmembrane transporter activity",3]
["arsenite secondary active transmembrane transporter activity",2]
["arsenite transmembrane transporter activity",2]
["arsenite transport",2]
["asexual reproduction",1]
["asexual sporulation",1]
["asparagine-tRNA ligase activity",1]
["asparaginyl-tRNA aminoacylation",1]
["aspartate carbamoyltransferase activity",1]
["aspartate family amino acid biosynthetic process",5]
["aspartate family amino acid metabolic process",9]
["aspartate kinase activity",2]
["aspartate metabolic process",3]
["aspartate-prephenate aminotransferase activity",1]
["aspartate-tRNA ligase activity",1]
["aspartic endopeptidase activity- intramembrane cleaving",1]
["aspartic-type endopeptidase activity",3]
["aspartic-type peptidase activity",3]
["aspartyl-tRNA aminoacylation",1]
["assembly of large subunit precursor of preribosome",1]
["aster",1]
["astral microtubule organization",1]
["asymmetric cell division",7]
["asymmetric neuroblast division",1]
["asymmetric stem cell division",1]
["ATF6-mediated unfolded protein response",1]
["Atg1/ULK1 kinase complex",1]
["Atg12 activating enzyme activity",1]
["Atg12-Atg5-Atg16 complex",1]
["Atg8 activating enzyme activity",1]
["Atg8 ligase activity",1]
["ATP binding",38]
["ATP biosynthetic process",10]
["ATP citrate synthase activity",1]
["ATP generation from ADP",9]
["ATP generation from poly-ADP-D-ribose",1]
["ATP metabolic process",17]
["ATP phosphoribosyltransferase activity",1]
["ATP synthesis coupled electron transport",3]
["ATP synthesis coupled proton transport",1]
["ATP transmembrane transporter activity",7]
["ATP transport",7]
["ATP-dependent chromatin remodeling",6]
["ATP-dependent microtubule motor activity",4]
["ATP-dependent microtubule motor activity- minus-end-directed",1]
["ATP-dependent microtubule motor activity- plus-end-directed",3]
["ATP-dependent NAD(P)H-hydrate dehydratase activity",1]
["ATP-dependent peptidase activity",10]
["ATP-independent citrate lyase complex",1]
["ATP:ADP antiporter activity",2]
["ATPase",194]
["ATPase activator activity",2]
["ATPase activity- coupled to transmembrane movement of ions- rotational mechanism",3]
["ATPase binding",2]
["ATPase complex",12]
["ATPase dependent transmembrane transport complex",1]
["ATPase regulator activity",2]
["ATPase- acting on DNA",16]
["ATPase- acting on RNA",32]
["ATPase-coupled arsenite transmembrane transporter activity",2]
["ATPase-coupled cation transmembrane transporter activity",5]
["ATPase-coupled inorganic anion transmembrane transporter activity",3]
["ATPase-coupled intramembrane lipid transporter activity",1]
["ATPase-coupled ion transmembrane transporter activity",5]
["ATPase-coupled lipid transmembrane transporter activity",1]
["ATPase-coupled phosphate ion transmembrane transporter activity",1]
["ATPase-coupled transmembrane transporter activity",77]
["attachment of GPI anchor to protein",2]
["attachment of mitotic spindle microtubules to kinetochore",8]
["attachment of spindle microtubules to kinetochore",11]
["attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation",2]
["autolysis",1]
["autonomic nervous system development",1]
["autophagosome",4]
["autophagosome assembly",12]
["autophagosome maturation",1]
["autophagosome membrane",1]
["autophagosome organization",12]
["autophagy",20]
["autophagy of mitochondrion",7]
["autophagy of nucleus",7]
["autophagy of peroxisome",1]
["auxin binding",2]
["auxin biosynthetic process",2]
["auxin efflux",3]
["auxin efflux transmembrane transporter activity",3]
["auxin homeostasis",8]
["auxin influx",1]
["auxin influx transmembrane transporter activity",1]
["auxin metabolic process",4]
["auxin polar transport",9]
["auxin transmembrane transporter activity",4]
["auxin transport",14]
["auxin-activated signaling pathway",4]
["axillary shoot meristem initiation",1]
["axis specification",3]
["axo-dendritic transport",2]
["axon",3]
["axon development",1]
["axon ensheathment",1]
["axon guidance",1]
["axon terminus",1]
["axonal transport",2]
["axonal transport of mitochondrion",2]
["axonemal basal plate",1]
["axonemal dynein complex assembly",3]
["axonemal microtubule depolymerization",1]
["axonemal outer doublet",1]
["axoneme",5]
["axoneme assembly",4]
["axonogenesis",1]
["azole transmembrane transport",1]
["azole transmembrane transporter activity",1]
["azurophil granule",1]
["azurophil granule membrane",1]
["barbed-end actin filament capping",1]
["basal RNA polymerase II transcription machinery binding",4]
["basal transcription machinery binding",4]
["base conversion or substitution editing",1]
["base-excision repair",3]
["base-excision repair- AP site formation",1]
["base-excision repair- gap-filling",1]
["basic amino acid transmembrane transport",1]
["basic amino acid transmembrane transporter activity",1]
["basic amino acid transport",1]
["basophil activation",1]
["basophil activation involved in immune response",1]
["BAT3 complex binding",1]
["behavior",6]
["benzene-containing compound metabolic process",3]
["beta-1-3-galactosyltransferase activity",1]
["beta-1-4-mannosyltransferase activity",2]
["beta-alanine catabolic process",1]
["beta-alanine metabolic process",1]
["beta-catenin binding",1]
["beta-catenin-TCF complex assembly",1]
["beta-galactosidase activity",2]
["beta-glucan biosynthetic process",5]
["beta-glucan catabolic process",1]
["beta-glucan metabolic process",7]
["beta-glucosidase activity",4]
["beta-glucuronidase activity",1]
["beta-lactamase activity",1]
["beta-mannosidase activity",1]
["beta-N-acetylglucosaminidase activity",1]
["beta-N-acetylhexosaminidase activity",1]
["beta-tubulin binding",4]
["betaine-aldehyde dehydrogenase activity",1]
["bile acid metabolic process",1]
["binding",658]
["bioactive lipid receptor activity",1]
["biofilm matrix",1]
["biological adhesion",5]
["biological process involved in interaction with host",8]
["biological process involved in interaction with symbiont",2]
["biological process involved in interspecies interaction between organisms",22]
["biological process involved in intraspecies interaction between organisms",8]
["biological process involved in symbiotic interaction",21]
["biological regulation",672]
["biological_process",1811]
["biomineral tissue development",1]
["biosynthetic process",479]
["biotin binding",1]
["biotin biosynthetic process",3]
["biotin carboxyl carrier protein biosynthetic process",1]
["biotin metabolic process",3]
["biotin synthase activity",1]
["biotin-[acetyl-CoA-carboxylase] ligase activity",1]
["biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity",1]
["biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity",1]
["biotin-protein ligase activity",1]
["blastocyst development",4]
["blastocyst formation",1]
["blastocyst growth",1]
["blood coagulation",3]
["blood vessel development",2]
["blood vessel morphogenesis",1]
["blue light photoreceptor activity",1]
["blue light signaling pathway",5]
["body morphogenesis",1]
["bone development",1]
["bone marrow development",1]
["bone mineralization",1]
["bone remodeling",1]
["bone resorption",1]
["border follicle cell migration",1]
["bounding membrane of organelle",174]
["box C/D RNP complex",2]
["box H/ACA RNA 3'-end processing",1]
["box H/ACA RNA metabolic process",1]
["box H/ACA RNA processing",1]
["box H/ACA RNP complex",2]
["box H/ACA snoRNA binding",1]
["box H/ACA snoRNP assembly",1]
["box H/ACA snoRNP complex",2]
["brain development",6]
["brain morphogenesis",1]
["branched-chain amino acid biosynthetic process",6]
["branched-chain amino acid catabolic process",4]
["branched-chain amino acid metabolic process",10]
["brassinosteroid biosynthetic process",3]
["brassinosteroid homeostasis",2]
["brassinosteroid mediated signaling pathway",5]
["brassinosteroid metabolic process",3]
["Bub1-Bub3 complex localization to kinetochore",1]
["bubble DNA binding",1]
["bundle sheath cell fate specification",1]
["butyrate metabolic process",1]
["butyrate-CoA ligase activity",1]
["C-22 sterol desaturase activity",1]
["C-4 methylsterol oxidase activity",2]
["C-5 methylation of cytosine",1]
["C-5 sterol desaturase activity",1]
["C-8 sterol isomerase activity",1]
["C-acyltransferase activity",1]
["C-methyltransferase activity",3]
["C-palmitoyltransferase activity",1]
["C-terminal protein amino acid modification",2]
["C-terminal protein lipidation",2]
["C4-dicarboxylate transmembrane transporter activity",5]
["C4-dicarboxylate transport",5]
["cadherin binding",1]
["cadmium ion binding",1]
["cadmium ion transmembrane transport",1]
["cadmium ion transmembrane transporter activity",1]
["cadmium ion transport",2]
["CAF-1 complex",2]
["caffeoyl-CoA O-methyltransferase activity",1]
["caffeoyl-CoA: alcohol caffeoyl transferase activity",1]
["calcium channel activity",6]
["calcium ion binding",11]
["calcium ion export",1]
["calcium ion export across plasma membrane",1]
["calcium ion homeostasis",6]
["calcium ion import",2]
["calcium ion import across plasma membrane",1]
["calcium ion import into cytosol",1]
["calcium ion transmembrane import into cytosol",1]
["calcium ion transmembrane transport",10]
["calcium ion transmembrane transporter activity",10]
["calcium ion transport",11]
["calcium ion transport into cytosol",1]
["calcium-dependent ATPase activity",1]
["calcium-dependent cysteine-type endopeptidase activity",1]
["calcium-dependent phospholipid binding",1]
["calcium-dependent protein kinase activity",2]
["calcium-dependent protein serine/threonine kinase activity",2]
["calcium-independent phospholipase A2 activity",1]
["calcium-ion regulated exocytosis",1]
["calcium-mediated signaling",3]
["calcium:cation antiporter activity",4]
["calcium:proton antiporter activity",1]
["calcium:sodium antiporter activity",3]
["callose deposition in cell wall",6]
["callose localization",7]
["callus formation",1]
["calmodulin binding",9]
["calmodulin-dependent protein kinase activity",3]
["camera-type eye development",1]
["cAMP-mediated signaling",1]
["canonical glycolysis",1]
["canonical Wnt signaling pathway",2]
["carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity",1]
["carbamoyl-phosphate synthase complex",1]
["carbohydrate binding",8]
["carbohydrate biosynthetic process",44]
["carbohydrate catabolic process",36]
["carbohydrate derivative binding",63]
["carbohydrate derivative biosynthetic process",88]
["carbohydrate derivative catabolic process",10]
["carbohydrate derivative metabolic process",138]
["carbohydrate derivative transmembrane transporter activity",18]
["carbohydrate derivative transport",22]
["carbohydrate export",1]
["carbohydrate homeostasis",1]
["carbohydrate kinase activity",6]
["carbohydrate mediated signaling",13]
["carbohydrate metabolic process",96]
["carbohydrate phosphatase activity",5]
["carbohydrate phosphorylation",6]
["carbohydrate transmembrane transport",9]
["carbohydrate transmembrane transporter activity",9]
["carbohydrate transport",10]
["carbohydrate:cation symporter activity",5]
["carbohydrate:proton symporter activity",5]
["carbon fixation",4]
["carbon-carbon lyase activity",16]
["carbon-nitrogen ligase activity- with glutamine as amido-N-donor",2]
["carbon-nitrogen lyase activity",3]
["carbon-oxygen lyase activity",14]
["carbon-sulfur lyase activity",5]
["carboxy-lyase activity",8]
["carboxy-terminal domain protein kinase complex",4]
["carboxyl- or carbamoyltransferase activity",1]
["carboxylic acid binding",9]
["carboxylic acid biosynthetic process",82]
["carboxylic acid catabolic process",32]
["carboxylic acid metabolic process",169]
["carboxylic acid transmembrane transport",29]
["carboxylic acid transmembrane transporter activity",29]
["carboxylic acid transport",32]
["carboxylic ester hydrolase activity",14]
["carboxypeptidase activity",5]
["cardiac cell development",1]
["cardiac chamber development",1]
["cardiac chamber morphogenesis",1]
["cardiac conduction",1]
["cardiac muscle cell development",1]
["cardiac muscle cell differentiation",2]
["cardiac muscle tissue development",2]
["cardiac septum development",1]
["cardiac septum morphogenesis",1]
["cardiocyte differentiation",2]
["cardiolipin acyl-chain remodeling",1]
["cardiolipin metabolic process",1]
["carotene beta-ring hydroxylase activity",1]
["carotene biosynthetic process",2]
["carotene catabolic process",2]
["carotene metabolic process",4]
["carotenoid biosynthetic process",10]
["carotenoid catabolic process",1]
["carotenoid dioxygenase activity",2]
["carotenoid metabolic process",15]
["carpel development",11]
["cartilage development",1]
["Casparian strip",1]
["catabolic process",241]
["catabolism by organism of cell wall peptidoglycan in other organism",1]
["catalytic activity",1000]
["catalytic activity- acting on a glycoprotein",4]
["catalytic activity- acting on a protein",243]
["catalytic activity- acting on a rRNA",8]
["catalytic activity- acting on a tRNA",22]
["catalytic activity- acting on DNA",41]
["catalytic activity- acting on RNA",86]
["catalytic complex",170]
["catalytic step 1 spliceosome",3]
["catalytic step 2 spliceosome",13]
["cation binding",94]
["cation channel activity",11]
["cation homeostasis",30]
["cation transmembrane transport",55]
["cation transmembrane transporter activity",49]
["cation transport",58]
["cation-transporting ATPase complex",1]
["cation:cation antiporter activity",6]
["CCAAT-binding factor complex",1]
["CCR4-NOT complex",2]
["CCR4-NOT core complex",2]
["Cdc73/Paf1 complex",1]
["CDP-alcohol phosphatidyltransferase activity",1]
["CDP-choline pathway",1]
["CDP-diacylglycerol biosynthetic process",1]
["CDP-diacylglycerol metabolic process",1]
["cell activation",5]
["cell activation involved in immune response",4]
["cell adhesion",4]
["cell adhesion molecule binding",1]
["cell aggregation",2]
["cell aging",1]
["cell body",4]
["cell chemotaxis",1]
["cell communication",194]
["cell communication by electrical coupling",1]
["cell communication by electrical coupling involved in cardiac conduction",1]
["cell communication involved in cardiac conduction",1]
["cell cortex",11]
["cell cortex of cell tip",1]
["cell cortex region",1]
["cell cycle",93]
["cell cycle checkpoint signaling",17]
["cell cycle DNA replication",8]
["cell cycle DNA replication initiation",1]
["cell cycle G1/S phase transition",4]
["cell cycle G2/M phase transition",3]
["cell cycle phase transition",11]
["cell cycle process",89]
["cell cycle switching",1]
["cell cycle switching- mitotic to meiotic cell cycle",1]
["cell death",26]
["cell death in response to oxidative stress",3]
["cell development",55]
["cell differentiation",95]
["cell differentiation in spinal cord",1]
["cell division",34]
["cell division site",4]
["cell envelope",1]
["cell fate commitment",8]
["cell fate commitment involved in formation of primary germ layer",1]
["cell fate specification",5]
["cell growth",54]
["cell junction",126]
["cell junction organization",3]
["cell leading edge",1]
["cell maturation",17]
["cell migration",6]
["cell morphogenesis",54]
["cell morphogenesis involved in differentiation",29]
["cell morphogenesis involved in neuron differentiation",2]
["cell motility",10]
["cell part morphogenesis",3]
["cell periphery",324]
["cell plate",9]
["cell plate assembly",1]
["cell plate formation involved in plant-type cell wall biogenesis",1]
["cell population proliferation",15]
["cell projection",27]
["cell projection assembly",10]
["cell projection membrane",2]
["cell projection morphogenesis",2]
["cell projection organization",15]
["cell recognition",3]
["cell redox homeostasis",5]
["cell septum",1]
["cell surface",6]
["cell surface pattern recognition receptor signaling pathway",1]
["cell surface receptor signaling pathway",23]
["cell surface receptor signaling pathway involved in cell-cell signaling",3]
["cell tip",5]
["cell tip growth",14]
["cell trailing edge",1]
["cell trailing edge membrane",1]
["cell volume homeostasis",1]
["cell wall",62]
["cell wall assembly",1]
["cell wall biogenesis",22]
["cell wall disassembly",1]
["cell wall disruption in other organism",1]
["cell wall hydroxyproline-rich glycoprotein metabolic process",3]
["cell wall macromolecule biosynthetic process",9]
["cell wall macromolecule catabolic process",2]
["cell wall macromolecule metabolic process",17]
["cell wall modification",9]
["cell wall modification involved in multidimensional cell growth",1]
["cell wall organization",21]
["cell wall organization involved in conjugation with cellular fusion",1]
["cell wall organization or biogenesis",45]
["cell wall pectin biosynthetic process",4]
["cell wall pectin metabolic process",6]
["cell wall polysaccharide biosynthetic process",9]
["cell wall polysaccharide catabolic process",1]
["cell wall polysaccharide metabolic process",13]
["cell wall proteoglycan metabolic process",3]
["cell wall thickening",6]
["cell-cell adhesion",1]
["cell-cell contact zone",1]
["cell-cell junction",123]
["cell-cell junction organization",3]
["cell-cell recognition",1]
["cell-cell signaling",7]
["cell-cell signaling by wnt",3]
["cellobiose glucosidase activity",2]
["cellular alcohol catabolic process",1]
["cellular alcohol metabolic process",1]
["cellular aldehyde metabolic process",20]
["cellular alkane metabolic process",2]
["cellular alkene metabolic process",1]
["cellular amide catabolic process",4]
["cellular amide metabolic process",95]
["cellular amine metabolic process",11]
["cellular amino acid biosynthetic process",37]
["cellular amino acid catabolic process",16]
["cellular amino acid metabolic process",78]
["cellular ammonium homeostasis",1]
["cellular aromatic compound metabolic process",490]
["cellular biogenic amine biosynthetic process",7]
["cellular biogenic amine catabolic process",3]
["cellular biogenic amine metabolic process",11]
["cellular biosynthetic process",440]
["cellular bud",1]
["cellular bud neck",1]
["cellular bud tip",1]
["cellular calcium ion homeostasis",4]
["cellular carbohydrate biosynthetic process",30]
["cellular carbohydrate catabolic process",20]
["cellular carbohydrate metabolic process",69]
["cellular catabolic process",220]
["cellular cation homeostasis",17]
["cellular chemical homeostasis",19]
["cellular component assembly",168]
["cellular component assembly involved in morphogenesis",12]
["cellular component biogenesis",248]
["cellular component disassembly",25]
["cellular component macromolecule biosynthetic process",9]
["cellular component maintenance",1]
["cellular component morphogenesis",66]
["cellular component organization",475]
["cellular component organization or biogenesis",533]
["cellular copper ion homeostasis",2]
["cellular defense response",1]
["cellular detoxification",13]
["cellular developmental process",131]
["cellular divalent inorganic cation homeostasis",6]
["cellular glucan metabolic process",32]
["cellular homeostasis",27]
["cellular hormone metabolic process",4]
["cellular hypotonic response",1]
["cellular ion homeostasis",17]
["cellular iron ion homeostasis",3]
["cellular ketone metabolic process",10]
["cellular lipid catabolic process",26]
["cellular lipid metabolic process",132]
["cellular localization",157]
["cellular macromolecule biosynthetic process",197]
["cellular macromolecule catabolic process",104]
["cellular macromolecule localization",114]
["cellular macromolecule metabolic process",589]
["cellular metabolic compound salvage",19]
["cellular metabolic process",1134]
["cellular metal ion homeostasis",11]
["cellular modified amino acid biosynthetic process",6]
["cellular modified amino acid catabolic process",2]
["cellular modified amino acid metabolic process",16]
["cellular monovalent inorganic cation homeostasis",7]
["cellular nitrogen compound biosynthetic process",207]
["cellular nitrogen compound catabolic process",65]
["cellular nitrogen compound metabolic process",529]
["cellular oxidant detoxification",12]
["cellular polysaccharide biosynthetic process",24]
["cellular polysaccharide catabolic process",14]
["cellular polysaccharide metabolic process",42]
["cellular potassium ion homeostasis",1]
["cellular process",1465]
["cellular process involved in reproduction in multicellular organism",20]
["cellular protein catabolic process",71]
["cellular protein complex disassembly",9]
["cellular protein localization",104]
["cellular protein metabolic process",385]
["cellular protein modification process",282]
["cellular protein-containing complex assembly",93]
["cellular protein-containing complex localization",5]
["cellular respiration",18]
["cellular response to abiotic stimulus",37]
["cellular response to abscisic acid stimulus",13]
["cellular response to acetate",1]
["cellular response to acid chemical",37]
["cellular response to alcohol",13]
["cellular response to amino acid starvation",3]
["cellular response to amino acid stimulus",3]
["cellular response to anoxia",1]
["cellular response to antibiotic",13]
["cellular response to auxin stimulus",5]
["cellular response to biotic stimulus",4]
["cellular response to blue light",7]
["cellular response to brassinosteroid stimulus",5]
["cellular response to calcium ion",3]
["cellular response to cAMP",1]
["cellular response to carbohydrate stimulus",15]
["cellular response to chemical stimulus",123]
["cellular response to chitin",1]
["cellular response to cold",6]
["cellular response to copper ion",1]
["cellular response to copper ion starvation",1]
["cellular response to cytokine stimulus",2]
["cellular response to cytokinin stimulus",4]
["cellular response to decreased oxygen levels",6]
["cellular response to disaccharide stimulus",2]
["cellular response to DNA damage stimulus",94]
["cellular response to drug",20]
["cellular response to dsRNA",8]
["cellular response to endogenous stimulus",56]
["cellular response to environmental stimulus",37]
["cellular response to ethylene stimulus",14]
["cellular response to external biotic stimulus",1]
["cellular response to external stimulus",54]
["cellular response to extracellular stimulus",51]
["cellular response to far red light",1]
["cellular response to gibberellin stimulus",3]
["cellular response to glucose starvation",3]
["cellular response to growth factor stimulus",2]
["cellular response to heat",3]
["cellular response to high light intensity",2]
["cellular response to hormone stimulus",49]
["cellular response to hydrogen peroxide",1]
["cellular response to hypoxia",5]
["cellular response to indolebutyric acid stimulus",1]
["cellular response to inorganic substance",16]
["cellular response to insulin stimulus",2]
["cellular response to interferon-gamma",2]
["cellular response to ionizing radiation",2]
["cellular response to iron ion",8]
["cellular response to jasmonic acid stimulus",11]
["cellular response to leucine",1]
["cellular response to leucine starvation",1]
["cellular response to light intensity",3]
["cellular response to light stimulus",24]
["cellular response to lipid",18]
["cellular response to lipopolysaccharide",1]
["cellular response to magnesium ion",1]
["cellular response to manganese ion",1]
["cellular response to mechanical stimulus",2]
["cellular response to metal ion",14]
["cellular response to misfolded protein",2]
["cellular response to molecule of bacterial origin",2]
["cellular response to nerve growth factor stimulus",1]
["cellular response to nitrate",2]
["cellular response to nitric oxide",1]
["cellular response to nitrogen compound",20]
["cellular response to nitrogen levels",10]
["cellular response to nitrogen starvation",7]
["cellular response to nutrient",4]
["cellular response to nutrient levels",47]
["cellular response to organic cyclic compound",26]
["cellular response to organic substance",83]
["cellular response to organonitrogen compound",9]
["cellular response to osmotic stress",8]
["cellular response to oxidative stress",23]
["cellular response to oxygen levels",6]
["cellular response to oxygen radical",1]
["cellular response to oxygen-containing compound",63]
["cellular response to ozone",1]
["cellular response to peptide",2]
["cellular response to peptide hormone stimulus",2]
["cellular response to pheromone",1]
["cellular response to phosphate starvation",19]
["cellular response to radiation",26]
["cellular response to reactive nitrogen species",3]
["cellular response to reactive oxygen species",8]
["cellular response to red light",1]
["cellular response to red or far red light",4]
["cellular response to redox state",1]
["cellular response to salicylic acid stimulus",10]
["cellular response to salt stress",5]
["cellular response to singlet oxygen",4]
["cellular response to starvation",40]
["cellular response to steroid hormone stimulus",5]
["cellular response to stimulus",361]
["cellular response to stress",216]
["cellular response to sucrose starvation",2]
["cellular response to sucrose stimulus",2]
["cellular response to sulfate starvation",1]
["cellular response to superoxide",1]
["cellular response to topologically incorrect protein",8]
["cellular response to toxic substance",14]
["cellular response to transforming growth factor beta stimulus",1]
["cellular response to trichostatin A",1]
["cellular response to unfolded protein",7]
["cellular response to UV",9]
["cellular response to UV-A",2]
["cellular response to UV-B",1]
["cellular response to UV-C",2]
["cellular response to virus",1]
["cellular response to water deprivation",4]
["cellular response to water stimulus",4]
["cellular transition metal ion homeostasis",6]
["cellular water homeostasis",1]
["cellular zinc ion homeostasis",2]
["cellular_component",1885]
["cellularization",1]
["cellulase activity",1]
["cellulose biosynthetic process",5]
["cellulose metabolic process",6]
["cellulose microfibril organization",1]
["central nervous system development",10]
["central nervous system neuron differentiation",2]
["central vacuole",1]
["centriolar satellite",1]
["centriole",4]
["centriole assembly",3]
["centriole replication",3]
["centromere complex assembly",3]
["centromeric sister chromatid cohesion",1]
["centrosome",5]
["centrosome cycle",4]
["centrosome duplication",4]
["centrosome separation",1]
["ceramide binding",1]
["ceramide biosynthetic process",4]
["ceramide catabolic process",1]
["ceramide metabolic process",5]
["ceramide transport",1]
["cerebral cortex neuron differentiation",1]
["channel activity",37]
["channel regulator activity",1]
["chaperone binding",4]
["chaperone cofactor-dependent protein refolding",2]
["chaperone complex",7]
["chaperone-mediated protein complex assembly",1]
["chaperone-mediated protein folding",18]
["chaperonin-containing T-complex",7]
["charged-tRNA amino acid modification",1]
["CHD-type complex",2]
["cheating during chimeric sorocarp development",1]
["checkpoint clamp complex",1]
["chemical homeostasis",55]
["chemical synaptic transmission",2]
["chemorepellent activity",1]
["chemotaxis",10]
["chemotaxis to cAMP",1]
["chiasma",1]
["chiasma assembly",3]
["chimeric colonial development",1]
["chimeric non-reproductive fruiting body development",1]
["chimeric sorocarp development",1]
["chitin binding",2]
["chitin catabolic process",1]
["chitin metabolic process",1]
["chitinase activity",1]
["chitosan binding",1]
["chloride channel activity",2]
["chloride transmembrane transport",2]
["chloride transmembrane transporter activity",2]
["chloride transport",2]
["chlorophyll binding",4]
["chlorophyll biosynthetic process",11]
["chlorophyll catabolic process",3]
["chlorophyll metabolic process",16]
["chlorophyll(ide) b reductase activity",1]
["chlorophyllide a oxygenase [overall] activity",1]
["chloroplast",468]
["chloroplast ATP synthase complex",1]
["chloroplast avoidance movement",1]
["chloroplast envelope",159]
["chloroplast fission",7]
["chloroplast inner membrane",23]
["chloroplast isoamylase complex",1]
["chloroplast localization",1]
["chloroplast membrane",41]
["chloroplast mRNA processing",1]
["chloroplast nucleoid",6]
["chloroplast organization",46]
["chloroplast outer membrane",14]
["chloroplast proton-transporting ATP synthase complex assembly",1]
["chloroplast relocation",1]
["chloroplast ribosome",1]
["chloroplast RNA modification",1]
["chloroplast RNA processing",1]
["chloroplast rRNA processing",2]
["chloroplast starch grain",2]
["chloroplast stroma",171]
["chloroplast stromal thylakoid",2]
["chloroplast thylakoid",81]
["chloroplast thylakoid lumen",2]
["chloroplast thylakoid membrane",61]
["chloroplast thylakoid membrane protein complex",5]
["chloroplast-nucleus signaling pathway",5]
["chloroplastic endopeptidase Clp complex",3]
["cholesterol binding",1]
["cholesterol biosynthetic process",1]
["cholesterol homeostasis",1]
["cholesterol metabolic process",1]
["cholesterol transport",1]
["choline biosynthetic process",1]
["choline metabolic process",1]
["choline transmembrane transporter activity",1]
["choline transport",1]
["chordate embryonic development",7]
["chorismate biosynthetic process",2]
["chorismate metabolic process",2]
["CHRAC",1]
["chromatin",57]
["chromatin assembly",8]
["chromatin assembly or disassembly",10]
["chromatin binding",22]
["chromatin disassembly",2]
["chromatin DNA binding",5]
["chromatin maintenance",1]
["chromatin organization",53]
["chromatin remodeling",17]
["chromatin silencing",7]
["chromatin silencing at telomere",1]
["chromatin silencing complex",2]
["chromatin-mediated maintenance of transcription",1]
["chromocenter",2]
["chromoplast",4]
["chromosomal region",21]
["chromosome",90]
["chromosome condensation",2]
["chromosome localization",11]
["chromosome movement towards spindle pole",4]
["chromosome organization",113]
["chromosome organization involved in meiotic cell cycle",9]
["chromosome passenger complex",1]
["chromosome segregation",37]
["chromosome separation",9]
["chromosome- centromeric region",12]
["chromosome- telomeric region",16]
["ciliary basal body",1]
["ciliary basal body-plasma membrane docking",1]
["ciliary base",2]
["ciliary membrane",1]
["ciliary plasm",5]
["ciliary pocket",1]
["ciliary pocket membrane",1]
["ciliary tip",1]
["ciliary transition zone",1]
["cilium",10]
["cilium assembly",8]
["cilium disassembly",1]
["cilium movement",3]
["cilium or flagellum-dependent cell motility",1]
["cilium organization",10]
["cilium-dependent cell motility",1]
["circadian regulation of calcium ion oscillation",1]
["circadian regulation of gene expression",2]
["circadian rhythm",16]
["circulatory system development",8]
["circumnutation",1]
["cis-Golgi network",1]
["cis-regulatory region sequence-specific DNA binding",3]
["cis-trans isomerase activity",20]
["citrate (Si)-synthase activity",1]
["citrate metabolic process",6]
["citrate synthase activity",1]
["citrate transmembrane transporter activity",1]
["citrate transport",1]
["clathrin adaptor complex",2]
["clathrin binding",4]
["clathrin coat",3]
["clathrin coat of coated pit",1]
["clathrin coat of endocytic vesicle",1]
["clathrin coat of trans-Golgi network vesicle",1]
["clathrin heavy chain binding",1]
["clathrin vesicle coat",3]
["clathrin-coated endocytic vesicle",1]
["clathrin-coated endocytic vesicle membrane",1]
["clathrin-coated pit",1]
["clathrin-coated vesicle",7]
["clathrin-coated vesicle cargo loading",1]
["clathrin-coated vesicle membrane",3]
["clathrin-dependent endocytosis",2]
["clathrin-dependent endocytosis involved in vitellogenesis",1]
["cleavage body",1]
["cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["cleavage involved in rRNA processing",11]
["cluster of actin-based cell projections",1]
["co-translational protein modification",1]
["CoA carboxylase activity",2]
["CoA-ligase activity",5]
["coagulation",3]
["coated membrane",8]
["coated vesicle",11]
["coated vesicle membrane",7]
["cobalt ion binding",8]
["cochlea development",1]
["coenzyme A biosynthetic process",1]
["coenzyme A metabolic process",1]
["coenzyme A transmembrane transport",1]
["coenzyme A transmembrane transporter activity",1]
["coenzyme A transport",1]
["cognition",3]
["cohesin complex",1]
["cold acclimation",5]
["columnar/cuboidal epithelial cell development",1]
["columnar/cuboidal epithelial cell differentiation",1]
["commitment complex",5]
["condensed chromosome",17]
["condensed chromosome- centromeric region",11]
["condensed nuclear chromosome",12]
["condensin complex",2]
["conidium development",1]
["conidium formation",1]
["conjugation",1]
["conjugation with cellular fusion",1]
["connective tissue development",1]
["contractile fiber",1]
["COP9 signalosome",1]
["COP9 signalosome assembly",2]
["COPI vesicle coat",1]
["COPI-coated vesicle",1]
["COPI-coated vesicle membrane",1]
["COPII vesicle coat",1]
["COPII-coated ER to Golgi transport vesicle",3]
["COPII-coated vesicle budding",1]
["COPII-coated vesicle cargo loading",1]
["copper ion binding",20]
["copper ion homeostasis",3]
["core mediator complex",4]
["core TFIIH complex portion of holo TFIIH complex",1]
["corolla development",1]
["cortical actin cytoskeleton",2]
["cortical cytoskeleton",4]
["cortical cytoskeleton organization",7]
["cortical granule",1]
["cortical granule exocytosis",1]
["cortical microtubule",2]
["cortical microtubule cytoskeleton",2]
["cortical microtubule organization",6]
["cortical microtubule- transverse to long axis",1]
["CORVET complex",4]
["cotranslational protein targeting to membrane",1]
["cotyledon development",5]
["cotyledon morphogenesis",3]
["cotyledon vascular tissue pattern formation",3]
["coumarin biosynthetic process",1]
["coumarin metabolic process",1]
["courtship behavior",1]
["covalent chromatin modification",30]
["cranial skeletal system development",1]
["CRD-mediated mRNA stability complex",1]
["CRD-mediated mRNA stabilization",1]
["cristae formation",1]
["Ctf18 RFC-like complex",4]
["Cul3-RING ubiquitin ligase complex",2]
["Cul4-RING E3 ubiquitin ligase complex",20]
["Cul4A-RING E3 ubiquitin ligase complex",3]
["Cul4B-RING E3 ubiquitin ligase complex",2]
["cullin-RING ubiquitin ligase complex",32]
["culmination involved in sorocarp development",1]
["CUT catabolic process",4]
["CUT metabolic process",4]
["cuticle development",9]
["cuticle hydrocarbon biosynthetic process",2]
["cutin biosynthetic process",2]
["cyclase activity",4]
["cyclic nucleotide-gated ion channel activity",2]
["cyclic-nucleotide-mediated signaling",1]
["cyclin binding",2]
["cyclin-dependent protein kinase activity",4]
["cyclin-dependent protein kinase holoenzyme complex",2]
["cyclin-dependent protein serine/threonine kinase activity",4]
["cyclin-dependent protein serine/threonine kinase regulator activity",2]
["cyclo-ligase activity",1]
["cyclohydrolase activity",3]
["cyclosporin A binding",2]
["cystathionine beta-lyase activity",1]
["cystathionine gamma-lyase activity",2]
["cystathionine gamma-synthase activity",3]
["cysteine biosynthetic process",4]
["cysteine biosynthetic process from serine",1]
["cysteine biosynthetic process via cystathionine",1]
["cysteine catabolic process",1]
["cysteine desulfurase activity",1]
["cysteine metabolic process",5]
["cysteine synthase activity",1]
["cysteine-S-conjugate beta-lyase activity",1]
["cysteine-type endopeptidase activity",6]
["cysteine-type peptidase activity",10]
["cytidine catabolic process",1]
["cytidine deaminase activity",1]
["cytidine deamination",1]
["cytidine metabolic process",2]
["cytidine to uridine editing",1]
["cytidylyltransferase activity",2]
["cytochrome b6f complex assembly",3]
["cytochrome complex",1]
["cytochrome complex assembly",5]
["cytochrome-b5 reductase activity- acting on NAD(P)H",1]
["cytochrome-c peroxidase activity",4]
["cytokine binding",1]
["cytokinesis",20]
["cytokinesis by cell plate formation",10]
["cytokinetic process",11]
["cytokinin catabolic process",1]
["cytokinin dehydrogenase activity",1]
["cytokinin metabolic process",3]
["cytokinin-activated signaling pathway",4]
["cytoplasm",1468]
["cytoplasm organization",1]
["cytoplasm to vacuole transport by the Cvt pathway",3]
["cytoplasmic chromosome",5]
["cytoplasmic exosome (RNase complex)",5]
["cytoplasmic microtubule",2]
["cytoplasmic microtubule depolymerization",1]
["cytoplasmic microtubule organization",10]
["cytoplasmic region",16]
["cytoplasmic ribonucleoprotein granule",16]
["cytoplasmic RNA surveillance",1]
["cytoplasmic side of endoplasmic reticulum membrane",3]
["cytoplasmic side of endosome membrane",1]
["cytoplasmic side of membrane",7]
["cytoplasmic side of plasma membrane",3]
["cytoplasmic stress granule",5]
["cytoplasmic translation",9]
["cytoplasmic translational initiation",4]
["cytoplasmic translational termination",1]
["cytoplasmic ubiquitin ligase complex",1]
["cytoplasmic vesicle",113]
["cytoplasmic vesicle lumen",1]
["cytoplasmic vesicle membrane",12]
["cytosine metabolic process",1]
["cytoskeletal protein binding",31]
["cytoskeleton",59]
["cytoskeleton organization",55]
["cytoskeleton-dependent cytokinesis",19]
["cytoskeleton-dependent intracellular transport",6]
["cytosol",365]
["cytosol to endoplasmic reticulum transport",1]
["cytosolic calcium ion transport",1]
["cytosolic large ribosomal subunit",6]
["cytosolic proteasome complex",3]
["cytosolic ribosome",20]
["cytosolic small ribosomal subunit",7]
["cytosolic transport",11]
["D-amino acid biosynthetic process",1]
["D-amino acid metabolic process",1]
["D-arabinose 1-dehydrogenase [NAD(P)+] activity",1]
["D-cysteine desulfhydrase activity",1]
["D-erythro-sphingosine kinase activity",3]
["D-lactate dehydrogenase (cytochrome) activity",2]
["D-lactate dehydrogenase activity",1]
["D-serine ammonia-lyase activity",1]
["D-serine biosynthetic process",1]
["D-serine metabolic process",1]
["D-xylose metabolic process",1]
["damaged DNA binding",13]
["dauer entry",1]
["dauer larval development",1]
["Dcp1-Dcp2 complex",1]
["de-etiolation",2]
["deacetylase activity",1]
["DEAD/H-box RNA helicase binding",1]
["deadenylation-dependent decapping of nuclear-transcribed mRNA",4]
["deadenylation-independent decapping of nuclear-transcribed mRNA",2]
["deaminase activity",2]
["defense response",95]
["defense response by callose deposition",5]
["defense response by callose deposition in cell wall",5]
["defense response by cell wall thickening",5]
["defense response to bacterium",55]
["defense response to fungus",37]
["defense response to Gram-negative bacterium",1]
["defense response to insect",1]
["defense response to oomycetes",2]
["defense response to other organism",107]
["defense response to virus",4]
["dehiscence",4]
["dehydro-D-arabinono-1-4-lactone biosynthetic process",1]
["dehydro-D-arabinono-1-4-lactone metabolic process",1]
["delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity",1]
["delta DNA polymerase complex",2]
["delta14-sterol reductase activity",1]
["delta3-5-delta2-4-dienoyl-CoA isomerase activity",1]
["demethylase activity",2]
["demethylation",7]
["dendrite",1]
["dendrite development",2]
["dendrite morphogenesis",1]
["dendritic shaft",1]
["dendritic spine",1]
["dendritic tree",1]
["dense core granule maturation",1]
["deoxycytidine deaminase activity",1]
["deoxycytidine kinase activity",1]
["deoxyhypusine monooxygenase activity",1]
["deoxyhypusine synthase activity",1]
["deoxynucleoside kinase activity",2]
["deoxyribodipyrimidine photo-lyase activity",1]
["deoxyribonuclease activity",11]
["deoxyribonucleoside metabolic process",1]
["deoxyribonucleoside monophosphate biosynthetic process",2]
["deoxyribonucleoside monophosphate metabolic process",2]
["deoxyribonucleotide catabolic process",1]
["deoxyribonucleotide metabolic process",1]
["deoxyribose phosphate catabolic process",1]
["deoxyribose phosphate metabolic process",1]
["dephosphorylation",52]
["dephosphorylation of RNA polymerase II C-terminal domain",1]
["depurination",1]
["depyrimidination",1]
["Derlin-1 retrotranslocation complex",3]
["detection of abiotic stimulus",5]
["detection of biotic stimulus",1]
["detection of chemical stimulus",5]
["detection of endogenous stimulus",2]
["detection of ethylene stimulus",2]
["detection of external biotic stimulus",1]
["detection of external stimulus",5]
["detection of gravity",2]
["detection of hormone stimulus",2]
["detection of light stimulus",2]
["detection of mechanical stimulus",1]
["detection of molecule of bacterial origin",1]
["detection of molecule of fungal origin",1]
["detection of nutrient",1]
["detection of oxidative stress",1]
["detection of peptidoglycan",1]
["detection of phosphate ion",1]
["detection of stimulus",12]
["determination of bilateral symmetry",3]
["determination of left/right symmetry",2]
["dethiobiotin synthase activity",1]
["detoxification",15]
["detoxification of cadmium ion",1]
["detoxification of inorganic compound",1]
["deubiquitinase activator activity",1]
["deubiquitinase activity",2]
["development of primary female sexual characteristics",1]
["development of primary sexual characteristics",2]
["developmental cell growth",19]
["developmental growth",54]
["developmental growth involved in morphogenesis",44]
["developmental induction",1]
["developmental maturation",25]
["developmental process",432]
["developmental process involved in reproduction",181]
["developmental vegetative growth",3]
["diacylglycerol biosynthetic process",2]
["diacylglycerol catabolic process",1]
["diacylglycerol cholinephosphotransferase activity",1]
["diacylglycerol kinase activity",2]
["diacylglycerol metabolic process",3]
["diadenosine polyphosphate biosynthetic process",1]
["diadenosine polyphosphate metabolic process",1]
["diadenosine tetraphosphate biosynthetic process",1]
["diadenosine tetraphosphate metabolic process",1]
["dicarboxylic acid biosynthetic process",4]
["dicarboxylic acid catabolic process",3]
["dicarboxylic acid metabolic process",18]
["dicarboxylic acid transmembrane transporter activity",6]
["dicarboxylic acid transport",6]
["dihydrobiopterin metabolic process",1]
["dihydrofolate biosynthetic process",1]
["dihydrofolate metabolic process",1]
["dihydrofolate synthase activity",1]
["dihydrokaempferol 4-reductase activity",1]
["dihydrolipoamide branched chain acyltransferase activity",1]
["dihydrolipoamide S-acyltransferase activity",1]
["dihydrolipoyl dehydrogenase activity",1]
["dihydrolipoyl dehydrogenase complex",2]
["dihydroorotase activity",1]
["dihydroorotate dehydrogenase activity",1]
["dihydropteroate synthase activity",1]
["dihydropyrimidinase activity",1]
["dihydropyrimidine dehydrogenase (NADP+) activity",1]
["dihydrouracil dehydrogenase (NAD+) activity",1]
["dihydroxy-acid dehydratase activity",1]
["dimethylallyltranstransferase activity",1]
["diol biosynthetic process",5]
["diol metabolic process",5]
["dioxygenase activity",7]
["dipeptidase activity",1]
["dipeptidyl-peptidase activity",3]
["diphosphate-fructose-6-phosphate 1-phosphotransferase activity",1]
["diphosphomevalonate decarboxylase activity",1]
["diphosphoric monoester hydrolase activity",1]
["diphosphotransferase activity",5]
["diphthine synthase activity",1]
["disaccharide biosynthetic process",4]
["disaccharide catabolic process",6]
["disaccharide metabolic process",13]
["disaccharide transmembrane transporter activity",2]
["disaccharide transport",3]
["disordered domain specific binding",2]
["disruption by organism of cellular component in other organism involved in symbiotic interaction",1]
["disruption by symbiont of host cellular component",1]
["distal axon",2]
["disulfide oxidoreductase activity",6]
["diterpene phytoalexin biosynthetic process",1]
["diterpene phytoalexin metabolic process",1]
["diterpenoid biosynthetic process",6]
["diterpenoid metabolic process",6]
["divalent inorganic anion homeostasis",4]
["divalent inorganic cation homeostasis",10]
["division septum",2]
["DNA (6-4) photolyase activity",1]
["DNA (cytosine-5-)-methyltransferase activity",1]
["DNA alkylation",5]
["DNA amplification",1]
["DNA binding",98]
["DNA biosynthetic process",13]
["DNA catabolic process",1]
["DNA conformation change",33]
["DNA damage checkpoint signaling",10]
["DNA damage response- detection of DNA damage",2]
["DNA damage response- signal transduction by p53 class mediator",1]
["DNA damage response- signal transduction by p53 class mediator resulting in cell cycle arrest",1]
["DNA dealkylation",3]
["DNA deamination",1]
["DNA demethylation",3]
["DNA double-strand break processing",2]
["DNA duplex unwinding",18]
["DNA endoreduplication",3]
["DNA geometric change",19]
["DNA helicase activity",20]
["DNA helicase complex",1]
["DNA insertion or deletion binding",2]
["DNA integration",2]
["DNA integrity checkpoint signaling",11]
["DNA ligase (ATP) activity",1]
["DNA ligase activity",1]
["DNA ligation",1]
["DNA ligation involved in DNA repair",1]
["DNA mediated transformation",3]
["DNA metabolic process",112]
["DNA methylation",5]
["DNA methylation on adenine",1]
["DNA methylation on cytosine",2]
["DNA methylation on cytosine within a CG sequence",1]
["DNA methylation on cytosine within a CNG sequence",1]
["DNA methylation or demethylation",7]
["DNA modification",9]
["DNA N-glycosylase activity",3]
["DNA packaging",12]
["DNA packaging complex",1]
["DNA photolyase activity",2]
["DNA polymerase activity",3]
["DNA polymerase binding",1]
["DNA polymerase complex",3]
["DNA primase activity",1]
["DNA recombinase assembly",4]
["DNA recombinase mediator complex",1]
["DNA recombination",32]
["DNA repair",76]
["DNA repair complex",8]
["DNA repair complex assembly",4]
["DNA replication",36]
["DNA replication checkpoint signaling",1]
["DNA replication factor C complex",5]
["DNA replication initiation",5]
["DNA replication origin binding",6]
["DNA replication preinitiation complex",4]
["DNA replication preinitiation complex assembly",1]
["DNA replication proofreading",1]
["DNA replication- Okazaki fragment processing",1]
["DNA replication- removal of RNA primer",1]
["DNA replication- synthesis of RNA primer",1]
["DNA replication-independent nucleosome assembly",2]
["DNA replication-independent nucleosome organization",2]
["DNA rewinding",1]
["DNA secondary structure binding",6]
["DNA strand elongation",3]
["DNA strand elongation involved in DNA replication",3]
["DNA strand exchange activity",4]
["DNA synthesis involved in DNA repair",7]
["DNA topoisomerase activity",3]
["DNA topoisomerase binding",1]
["DNA topoisomerase type I (single strand cut- ATP-independent) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activator activity",1]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) regulator activity",1]
["DNA topological change",2]
["DNA unwinding involved in DNA replication",5]
["DNA-(apurinic or apyrimidinic site) endonuclease activity",2]
["DNA-binding transcription activator activity- RNA polymerase II-specific",1]
["DNA-binding transcription factor activity",40]
["DNA-binding transcription factor activity- RNA polymerase II-specific",8]
["DNA-binding transcription factor binding",4]
["DNA-binding transcription repressor activity- RNA polymerase II-specific",2]
["DNA-dependent DNA replication",33]
["DNA-dependent DNA replication maintenance of fidelity",4]
["DNA-directed 5'-3' RNA polymerase activity",2]
["DNA-directed DNA polymerase activity",3]
["DNA-directed RNA polymerase complex",20]
["DNA-methyltransferase activity",2]
["DNA-N1-methyladenine dioxygenase activity",1]
["DNA-templated transcription- elongation",3]
["DNA-templated transcription- initiation",8]
["DNA-templated transcription- termination",3]
["dodecenoyl-CoA delta-isomerase activity",1]
["dolichol kinase activity",1]
["dolichol-linked oligosaccharide biosynthetic process",4]
["dolichyl diphosphate biosynthetic process",2]
["dolichyl diphosphate metabolic process",2]
["dolichyl monophosphate biosynthetic process",1]
["dolichyl pyrophosphate Man9GlcNAc2 alpha-1-3-glucosyltransferase activity",2]
["dolichyl-diphosphooligosaccharide-protein glycotransferase activity",3]
["dolichyl-phosphate beta-D-mannosyltransferase activity",1]
["dolichyldiphosphatase activity",1]
["dormancy process",3]
["dorsal/ventral pattern formation",2]
["dorsal/ventral pattern formation- imaginal disc",1]
["dosage compensation",2]
["dosage compensation by inactivation of X chromosome",2]
["double fertilization forming a zygote and endosperm",3]
["double-strand break repair",29]
["double-strand break repair via break-induced replication",2]
["double-strand break repair via homologous recombination",16]
["double-strand break repair via nonhomologous end joining",7]
["double-strand break repair via synthesis-dependent strand annealing",4]
["double-strand/single-strand DNA junction binding",1]
["double-stranded DNA 3'-5' exodeoxyribonuclease activity",1]
["double-stranded DNA binding",33]
["double-stranded DNA exodeoxyribonuclease activity",1]
["double-stranded RNA binding",2]
["double-stranded telomeric DNA binding",2]
["drug binding",59]
["drug catabolic process",20]
["drug metabolic process",93]
["drug transmembrane transport",19]
["drug transport",22]
["dsRNA processing",8]
["dsRNA transport",2]
["dynein complex binding",1]
["ear development",2]
["ear morphogenesis",1]
["early endosome",21]
["early endosome membrane",4]
["early endosome to late endosome transport",3]
["early phagosome",1]
["early phagosome membrane",1]
["EARP complex",1]
["ectodermal placode development",1]
["ectodermal placode formation",1]
["ectodermal placode morphogenesis",1]
["efflux transmembrane transporter activity",3]
["egg activation",1]
["eggshell formation",1]
["EKC/KEOPS complex",2]
["electron transfer activity",4]
["electron transfer flavoprotein complex",1]
["electron transport chain",18]
["electron transporter- transferring electrons within the cyclic electron transport pathway of photosynthesis activity",1]
["electron transporter- transferring electrons within the noncyclic electron transport pathway of photosynthesis activity",1]
["electron-transferring-flavoprotein dehydrogenase activity",1]
["elongator holoenzyme complex",2]
["embryo development",103]
["embryo development ending in birth or egg hatching",12]
["embryo development ending in seed dormancy",80]
["embryo sac cellularization",1]
["embryo sac central cell differentiation",3]
["embryo sac development",24]
["embryonic appendage morphogenesis",3]
["embryonic axis specification",2]
["embryonic cranial skeleton morphogenesis",1]
["embryonic development via the syncytial blastoderm",1]
["embryonic digit morphogenesis",2]
["embryonic epithelial tube formation",1]
["embryonic limb morphogenesis",2]
["embryonic meristem development",7]
["embryonic meristem initiation",5]
["embryonic morphogenesis",15]
["embryonic neurocranium morphogenesis",1]
["embryonic organ development",2]
["embryonic organ morphogenesis",2]
["embryonic pattern specification",5]
["embryonic pectoral fin morphogenesis",1]
["embryonic shoot morphogenesis",1]
["embryonic skeletal system development",1]
["embryonic skeletal system morphogenesis",1]
["EMC complex",1]
["endocytic patch",1]
["endocytic recycling",5]
["endocytic vesicle",7]
["endocytic vesicle membrane",2]
["endocytosis",16]
["endodeoxyribonuclease activity",8]
["endodeoxyribonuclease activity- producing 3'-phosphomonoesters",3]
["endodeoxyribonuclease activity- producing 5'-phosphomonoesters",2]
["endoderm development",3]
["endoderm formation",3]
["endodermal cell differentiation",1]
["endodermal cell fate commitment",1]
["endomembrane system",375]
["endomembrane system organization",19]
["endonuclease activity",30]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters",3]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",4]
["endonuclease complex",1]
["endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",4]
["endonucleolytic cleavage involved in rRNA processing",7]
["endonucleolytic cleavage involved in tRNA processing",1]
["endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",6]
["endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",2]
["endopeptidase activator activity",1]
["endopeptidase activity",23]
["endopeptidase Clp complex",3]
["endopeptidase complex",20]
["endopeptidase inhibitor activity",1]
["endopeptidase regulator activity",2]
["endoplasmic reticulum",173]
["endoplasmic reticulum calcium ion homeostasis",1]
["endoplasmic reticulum chaperone complex",1]
["endoplasmic reticulum exit site",1]
["endoplasmic reticulum lumen",8]
["endoplasmic reticulum membrane",73]
["endoplasmic reticulum membrane organization",1]
["endoplasmic reticulum organization",4]
["endoplasmic reticulum palmitoyltransferase complex",2]
["endoplasmic reticulum quality control compartment",1]
["endoplasmic reticulum Sec complex",1]
["endoplasmic reticulum stress-induced pre-emptive quality control",1]
["endoplasmic reticulum subcompartment",74]
["endoplasmic reticulum to cytosol transport",2]
["endoplasmic reticulum to Golgi vesicle-mediated transport",8]
["endoplasmic reticulum tubular network",1]
["endoplasmic reticulum unfolded protein response",7]
["endoribonuclease activity",6]
["endoribonuclease activity- producing 5'-phosphomonoesters",2]
["endoribonuclease complex",1]
["endosomal transport",17]
["endosomal vesicle fusion",2]
["endosome",90]
["endosome membrane",23]
["endosome organization",3]
["endosome to lysosome transport",8]
["endosome to lysosome transport via multivesicular body sorting pathway",3]
["endosome transport via multivesicular body sorting pathway",6]
["endosperm development",4]
["endothelial cell development",1]
["endothelial cell differentiation",1]
["endothelial cell morphogenesis",1]
["endothelium development",1]
["energy coupled proton transport- down electrochemical gradient",1]
["energy derivation by oxidation of organic compounds",30]
["energy homeostasis",1]
["energy quenching",1]
["energy reserve metabolic process",12]
["enone reductase activity",1]
["enoyl-CoA hydratase activity",4]
["ensheathment of neurons",1]
["ent-cassa-12-15-diene 11-hydroxylase activity",1]
["ent-kaurenoate oxidase activity",1]
["enteric nervous system development",1]
["entrainment of circadian clock",2]
["entry into diapause",1]
["envelope",246]
["enzyme activator activity",22]
["enzyme binding",87]
["enzyme inhibitor activity",8]
["enzyme linked receptor protein signaling pathway",14]
["enzyme regulator activity",46]
["enzyme-directed rRNA 2'-O-methylation",1]
["enzyme-directed rRNA pseudouridine synthesis",3]
["epidermal cell differentiation",2]
["epidermal cell fate specification",1]
["epidermal growth factor catabolic process",1]
["epidermal stem cell homeostasis",1]
["epidermis development",4]
["epithelial cell development",2]
["epithelial cell differentiation",5]
["epithelial cell differentiation involved in prostate gland development",1]
["epithelial cell migration",1]
["epithelial cell morphogenesis",1]
["epithelial cilium movement involved in determination of left/right asymmetry",1]
["epithelial cilium movement involved in extracellular fluid movement",1]
["epithelial tube formation",1]
["epithelial tube morphogenesis",3]
["epithelium development",13]
["epithelium migration",1]
["epoxide hydrolase activity",1]
["epsilon DNA polymerase complex",1]
["equatorial cell cortex",1]
["equatorial microtubule organizing center",1]
["ER body organization",1]
["ER overload response",1]
["ER to Golgi transport vesicle membrane",3]
["ER ubiquitin ligase complex",1]
["ER-associated misfolded protein catabolic process",2]
["ER-nucleus signaling pathway",2]
["ERAD pathway",13]
["ERCC4-ERCC1 complex",1]
["error-free translesion synthesis",2]
["error-prone translesion synthesis",4]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process",2]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process",1]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",4]
["ESC/E(Z) complex",1]
["ESCRT complex",5]
["ESCRT I complex",1]
["ESCRT II complex",2]
["ESCRT III complex",2]
["establishment of cell polarity",3]
["establishment of chromosome localization",10]
["establishment of localization",341]
["establishment of localization in cell",128]
["establishment of mitochondrion localization",3]
["establishment of mitochondrion localization- microtubule-mediated",3]
["establishment of mitotic spindle localization",1]
["establishment of organelle localization",18]
["establishment of planar polarity",1]
["establishment of plastid localization",1]
["establishment of protein localization",96]
["establishment of protein localization to chloroplast",9]
["establishment of protein localization to endoplasmic reticulum",4]
["establishment of protein localization to membrane",11]
["establishment of protein localization to mitochondrial membrane",1]
["establishment of protein localization to mitochondrion",8]
["establishment of protein localization to organelle",51]
["establishment of protein localization to peroxisome",5]
["establishment of protein localization to plasma membrane",1]
["establishment of protein localization to vacuole",11]
["establishment of protein-containing complex localization to telomere",1]
["establishment of RNA localization",21]
["establishment of spindle localization",1]
["establishment of tissue polarity",1]
["establishment of vesicle localization",2]
["establishment or maintenance of cell polarity",5]
["establishment or maintenance of cytoskeleton polarity",1]
["establishment or maintenance of microtubule cytoskeleton polarity",1]
["ethanolamine-containing compound metabolic process",1]
["ether hydrolase activity",1]
["ethylene binding",2]
["ethylene biosynthetic process",1]
["ethylene metabolic process",1]
["ethylene receptor activity",2]
["ethylene-activated signaling pathway",12]
["etioplast organization",2]
["euchromatin",3]
["eukaryotic 48S preinitiation complex",2]
["eukaryotic translation initiation factor 2 complex",1]
["eukaryotic translation initiation factor 2B complex",5]
["eukaryotic translation initiation factor 3 complex",6]
["eukaryotic translation initiation factor 3 complex- eIF3m",1]
["excretion",1]
["exit from host",1]
["exit from host cell",1]
["exit from mitosis",3]
["exocrine system development",1]
["exocyst",3]
["exocyst assembly",1]
["exocyst localization",1]
["exocytic process",2]
["exocytic vesicle",2]
["exocytic vesicle membrane",1]
["exocytosis",15]
["exodeoxyribonuclease activity",4]
["exodeoxyribonuclease activity- producing 5'-phosphomonoesters",4]
["exon-exon junction complex",1]
["exonuclease activity",20]
["exonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",13]
["exonucleolytic catabolism of deadenylated mRNA",6]
["exonucleolytic trimming involved in rRNA processing",3]
["exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",3]
["exopeptidase activity",13]
["exoribonuclease activity",9]
["exoribonuclease activity- producing 5'-phosphomonoesters",9]
["exoribonuclease complex",10]
["exosomal secretion",1]
["exosome (RNase complex)",10]
["exploration behavior",1]
["export across plasma membrane",1]
["external encapsulating structure",62]
["external encapsulating structure organization",32]
["external side of cell wall",1]
["external side of plasma membrane",1]
["extracellular exosome",1]
["extracellular exosome biogenesis",1]
["extracellular matrix",1]
["extracellular matrix assembly",11]
["extracellular matrix disassembly",1]
["extracellular matrix organization",13]
["extracellular organelle",1]
["extracellular region",65]
["extracellular space",11]
["extracellular structure organization",13]
["extracellular vesicle",1]
["extracellular vesicle biogenesis",1]
["extrinsic component of cytoplasmic side of plasma membrane",3]
["extrinsic component of endoplasmic reticulum membrane",1]
["extrinsic component of endosome membrane",1]
["extrinsic component of lysosome membrane",1]
["extrinsic component of membrane",16]
["extrinsic component of mitochondrial inner membrane",1]
["extrinsic component of organelle membrane",4]
["extrinsic component of plasma membrane",3]
["extrinsic component of vacuolar membrane",1]
["eye development",2]
["eyelid development in camera-type eye",1]
["FAD binding",2]
["FAD biosynthetic process",1]
["FAD diphosphatase activity",1]
["FAD metabolic process",2]
["FAD transmembrane transport",1]
["FAD transmembrane transporter activity",1]
["farnesyl diphosphate biosynthetic process",1]
["farnesyl diphosphate metabolic process",3]
["farnesyl-diphosphate farnesyltransferase activity",1]
["farnesyltranstransferase activity",3]
["fat-soluble vitamin biosynthetic process",5]
["fat-soluble vitamin metabolic process",5]
["fatty acid beta-oxidation",12]
["fatty acid beta-oxidation using acyl-CoA dehydrogenase",4]
["fatty acid binding",1]
["fatty acid biosynthetic process",15]
["fatty acid catabolic process",13]
["fatty acid derivative binding",1]
["fatty acid derivative biosynthetic process",7]
["fatty acid derivative catabolic process",1]
["fatty acid derivative metabolic process",11]
["fatty acid derivative transport",1]
["fatty acid elongase activity",2]
["fatty acid elongase complex",1]
["fatty acid elongation",2]
["fatty acid homeostasis",1]
["fatty acid in-chain hydroxylase activity",1]
["fatty acid ligase activity",3]
["fatty acid metabolic process",40]
["fatty acid omega-oxidation",1]
["fatty acid oxidation",13]
["fatty acid synthase activity",5]
["fatty acid transmembrane transporter activity",1]
["fatty acid transport",3]
["fatty-acyl-CoA binding",1]
["fatty-acyl-CoA biosynthetic process",1]
["fatty-acyl-CoA catabolic process",1]
["fatty-acyl-CoA metabolic process",3]
["fatty-acyl-CoA reductase (alcohol-forming) activity",1]
["female gamete generation",6]
["female gonad development",1]
["female mating behavior",1]
["female meiosis chromosome segregation",1]
["female meiotic nuclear division",2]
["female sex differentiation",1]
["ferric iron binding",2]
["ferric-chelate reductase activity",1]
["ferrous iron binding",2]
["ferroxidase activity",1]
["fertilization",4]
["fibrillar center",1]
["ficolin-1-rich granule",1]
["ficolin-1-rich granule lumen",1]
["fin development",2]
["fin morphogenesis",2]
["fin regeneration",1]
["FK506 binding",6]
["flagellated sperm motility",1]
["flap endonuclease activity",3]
["flap-structured DNA binding",1]
["flavin adenine dinucleotide binding",10]
["flavin adenine dinucleotide biosynthetic process",1]
["flavin adenine dinucleotide catabolic process",1]
["flavin adenine dinucleotide metabolic process",4]
["flavin-containing compound biosynthetic process",5]
["flavin-containing compound catabolic process",1]
["flavin-containing compound metabolic process",9]
["flavone biosynthetic process",1]
["flavone metabolic process",1]
["flavonoid biosynthetic process",7]
["flavonoid metabolic process",10]
["flavonoid transport from endoplasmic reticulum to plant-type vacuole",1]
["flavonol biosynthetic process",1]
["flavonol metabolic process",1]
["flavonol synthase activity",1]
["floral meristem determinacy",1]
["floral organ abscission",2]
["floral organ development",28]
["floral organ formation",5]
["floral organ morphogenesis",7]
["floral whorl development",22]
["flower calyx development",2]
["flower development",41]
["fluid transport",3]
["FMN adenylyltransferase activity",2]
["FMN binding",1]
["FMN hydrolase activity",1]
["FMN transmembrane transporter activity",1]
["FMN-binding domain binding",1]
["folic acid transmembrane transporter activity",1]
["folic acid transport",1]
["folic acid-containing compound biosynthetic process",3]
["folic acid-containing compound metabolic process",4]
["forebrain development",5]
["forebrain morphogenesis",1]
["formation of anatomical boundary",1]
["formation of plant organ boundary",1]
["formation of primary germ layer",4]
["formation of translation preinitiation complex",1]
["four-way junction DNA binding",5]
["four-way junction helicase activity",3]
["frizzled binding",1]
["fructokinase activity",1]
["fructosamine metabolic process",1]
["fructose 1-6-bisphosphate 1-phosphatase activity",3]
["fructose 1-6-bisphosphate metabolic process",3]
["fructose 6-phosphate metabolic process",3]
["fructose export from vacuole to cytoplasm",1]
["fructose metabolic process",4]
["fructose transmembrane transport",1]
["fructose transmembrane transporter activity",1]
["fructose-bisphosphate aldolase activity",2]
["fruit development",102]
["fruit morphogenesis",1]
["fucose catabolic process",1]
["fucose metabolic process",1]
["fucosidase activity",1]
["fucosylation",2]
["fucosyltransferase activity",2]
["fumarate hydratase activity",1]
["fumarate metabolic process",1]
["fumarate reductase complex",1]
["fumarylacetoacetase activity",1]
["fumarylpyruvate hydrolase activity",1]
["fungal biofilm matrix",1]
["fungal-type cell wall",2]
["fungal-type cell wall disassembly",1]
["fungal-type cell wall disassembly involved in conjugation with cellular fusion",1]
["fungal-type cell wall organization",1]
["fungal-type cell wall organization or biogenesis",1]
["fungal-type vacuole",5]
["fungal-type vacuole membrane",3]
["fungiform papilla development",1]
["fungiform papilla formation",1]
["fungiform papilla morphogenesis",1]
["fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm",1]
["G protein-coupled receptor activity",2]
["G protein-coupled receptor binding",4]
["G protein-coupled receptor signaling pathway",7]
["G protein-coupled receptor signaling pathway- coupled to cyclic nucleotide second messenger",3]
["G-protein beta/gamma-subunit complex binding",1]
["G-quadruplex DNA binding",1]
["G-quadruplex DNA unwinding",1]
["G-rich single-stranded DNA binding",1]
["G1/S transition of mitotic cell cycle",3]
["G2/M transition of mitotic cell cycle",3]
["GAIT complex",2]
["galactokinase activity",1]
["galactolipase activity",1]
["galactolipid biosynthetic process",3]
["galactolipid metabolic process",4]
["galactonolactone dehydrogenase activity",1]
["galactose catabolic process",2]
["galactose metabolic process",3]
["galactose-1-phosphate phosphatase activity",1]
["galactosidase activity",3]
["galactosyltransferase activity",11]
["galactosylxylosylprotein 3-beta-galactosyltransferase activity",1]
["galacturonan metabolic process",10]
["gamete generation",22]
["gametophyte development",68]
["gamma-aminobutyric acid catabolic process",2]
["gamma-aminobutyric acid metabolic process",2]
["gamma-secretase complex",1]
["gamma-tubulin binding",1]
["gamma-tubulin complex",1]
["gamma-tubulin complex localization",1]
["gamma-tubulin small complex",1]
["ganglioside binding",1]
["ganglioside GM1 binding",1]
["ganglioside GM1 transport to membrane",1]
["ganglioside GM2 binding",1]
["ganglioside GM3 binding",1]
["ganglioside GP1c binding",1]
["ganglioside GT1b binding",1]
["GARP complex",2]
["gastrulation",5]
["gated channel activity",12]
["GDP binding",3]
["GDP biosynthetic process",1]
["GDP metabolic process",1]
["GDP-dissociation inhibitor activity",1]
["GDP-fucose transmembrane transport",3]
["GDP-fucose transmembrane transporter activity",3]
["GDP-L-fucose biosynthetic process",1]
["GDP-L-fucose metabolic process",1]
["GDP-Man:Man3GlcNAc2-PP-Dol alpha-1-2-mannosyltransferase activity",2]
["GDP-mannose 4-6-dehydratase activity",1]
["GDP-mannose transmembrane transport",1]
["GDP-mannose transmembrane transporter activity",1]
["Gemini of coiled bodies",1]
["gene conversion",2]
["gene expression",239]
["gene silencing",23]
["gene silencing by miRNA",9]
["gene silencing by RNA",17]
["gene silencing by RNA-directed DNA methylation",1]
["generation of catalytic spliceosome for first transesterification step",2]
["generation of neurons",13]
["generation of precursor metabolites and energy",67]
["generative cell differentiation",1]
["genetic imprinting",3]
["genetic transfer",3]
["geranylgeranyl diphosphate metabolic process",1]
["geranylgeranyl reductase activity",1]
["geranylgeranyl-diphosphate geranylgeranyltransferase activity",1]
["geranyltranstransferase activity",2]
["germ cell development",6]
["germ cell migration",1]
["germ plasm",1]
["germ-line stem-cell niche homeostasis",1]
["germline cell cycle switching- mitotic to meiotic cell cycle",1]
["gibberellic acid homeostasis",1]
["gibberellic acid mediated signaling pathway",3]
["gibberellin biosynthetic process",5]
["gibberellin mediated signaling pathway",3]
["gibberellin metabolic process",5]
["GID complex",1]
["gland development",3]
["glial cell development",2]
["glial cell differentiation",4]
["glial cell migration",1]
["glial cell proliferation",1]
["gliogenesis",4]
["global genome nucleotide-excision repair",3]
["glucan 1-3-alpha-glucosidase activity",1]
["glucan biosynthetic process",14]
["glucan catabolic process",13]
["glucan endo-1-3-beta-D-glucosidase activity",1]
["glucan metabolic process",32]
["gluconeogenesis",7]
["glucosamine-containing compound catabolic process",1]
["glucosamine-containing compound metabolic process",1]
["glucose 6-phosphate metabolic process",4]
["glucose binding",1]
["glucose catabolic process",1]
["glucose catabolic process to pyruvate",1]
["glucose import",5]
["glucose metabolic process",12]
["glucose transmembrane transport",6]
["glucose transmembrane transporter activity",6]
["glucose-1-phosphate adenylyltransferase activity",1]
["glucose-6-phosphate dehydrogenase activity",2]
["glucose-6-phosphate isomerase activity",1]
["glucosidase activity",5]
["glucoside transmembrane transporter activity",1]
["glucoside transport",1]
["glucosinolate biosynthetic process",3]
["glucosinolate biosynthetic process from homomethionine",1]
["glucosinolate catabolic process",3]
["glucosinolate metabolic process",6]
["glucosyltransferase activity",10]
["glucuronate-1-phosphate uridylyltransferase activity",1]
["glucuronosyltransferase activity",4]
["glucuronoxylan biosynthetic process",3]
["glucuronoxylan glucuronosyltransferase activity",1]
["glucuronoxylan metabolic process",3]
["glutamate biosynthetic process",1]
["glutamate catabolic process",2]
["glutamate decarboxylation to succinate",2]
["glutamate dehydrogenase (NADP+) activity",1]
["glutamate dehydrogenase [NAD(P)+] activity",1]
["glutamate metabolic process",8]
["glutamate N-acetyltransferase activity",1]
["glutamate receptor activity",1]
["glutamate-1-semialdehyde 2-1-aminomutase activity",1]
["glutamate-prephenate aminotransferase activity",1]
["glutamate-tRNA ligase activity",1]
["glutamine family amino acid biosynthetic process",6]
["glutamine family amino acid catabolic process",4]
["glutamine family amino acid metabolic process",14]
["glutamine metabolic process",3]
["glutamine-tRNA ligase activity",1]
["glutaminyl-peptide cyclotransferase activity",1]
["glutaminyl-tRNA aminoacylation",1]
["glutamyl-tRNA aminoacylation",2]
["glutathione binding",1]
["glutathione catabolic process",1]
["glutathione dehydrogenase (ascorbate) activity",1]
["glutathione disulfide oxidoreductase activity",3]
["glutathione gamma-glutamylcysteinyltransferase activity",2]
["glutathione hydrolase activity",1]
["glutathione metabolic process",4]
["glutathione transferase activity",3]
["glutathione transmembrane transport",1]
["glutathione transport",2]
["glutathione-disulfide reductase (NADPH) activity",2]
["glyceraldehyde-3-phosphate biosynthetic process",1]
["glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate metabolic process",9]
["glycerate dehydrogenase activity",2]
["glycerate transmembrane transport",1]
["glycerate transmembrane transporter activity",1]
["glycerol biosynthetic process",1]
["glycerol catabolic process",2]
["glycerol kinase activity",1]
["glycerol metabolic process",4]
["glycerol-3-phosphatase activity",1]
["glycerol-3-phosphate dehydrogenase (quinone) activity",1]
["glycerol-3-phosphate metabolic process",2]
["glycerol-3-phosphate O-acyltransferase activity",1]
["glycerolipid biosynthetic process",18]
["glycerolipid catabolic process",4]
["glycerolipid metabolic process",27]
["glycerophosphate shuttle",1]
["glycerophospholipid biosynthetic process",13]
["glycerophospholipid catabolic process",1]
["glycerophospholipid metabolic process",19]
["glycine binding",1]
["glycine biosynthetic process",1]
["glycine biosynthetic process- by transamination of glyoxylate",1]
["glycine catabolic process",1]
["glycine hydroxymethyltransferase activity",2]
["glycine metabolic process",2]
["glycine-tRNA ligase activity",1]
["glycine:2-oxoglutarate aminotransferase activity",1]
["glycogen (starch) synthase activity",1]
["glycogen biosynthetic process",4]
["glycogen catabolic process",3]
["glycogen debranching enzyme activity",4]
["glycogen metabolic process",12]
["glycogen phosphorylase activity",2]
["glycogenin glucosyltransferase activity",2]
["glycolate dehydrogenase activity",1]
["glycolate oxidase activity",1]
["glycolate transmembrane transport",1]
["glycolate transmembrane transporter activity",1]
["glycolate transport",1]
["glycolipid binding",2]
["glycolipid biosynthetic process",12]
["glycolipid catabolic process",1]
["glycolipid mannosyltransferase activity",2]
["glycolipid metabolic process",15]
["glycolipid transport",1]
["glycolytic process",9]
["glycolytic process through fructose-6-phosphate",3]
["glycolytic process through glucose-6-phosphate",1]
["glycophagy",1]
["glycoprotein 2-beta-D-xylosyltransferase activity",1]
["glycoprotein 3-alpha-L-fucosyltransferase activity",1]
["glycoprotein biosynthetic process",34]
["glycoprotein catabolic process",1]
["glycoprotein metabolic process",41]
["glycosaminoglycan catabolic process",1]
["glycosaminoglycan metabolic process",1]
["glycoside catabolic process",1]
["glycoside metabolic process",1]
["glycoside transport",1]
["glycosinolate biosynthetic process",3]
["glycosinolate catabolic process",3]
["glycosinolate metabolic process",6]
["glycosphingolipid binding",1]
["glycosphingolipid catabolic process",1]
["glycosphingolipid metabolic process",2]
["glycosyl compound biosynthetic process",11]
["glycosyl compound catabolic process",5]
["glycosyl compound metabolic process",24]
["glycosylation",39]
["glycosylceramide catabolic process",1]
["glycosylceramide metabolic process",1]
["glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex",2]
["glycosyltransferase activity",60]
["glycyl-tRNA aminoacylation",1]
["glycylpeptide N-tetradecanoyltransferase activity",1]
["glyoxalase III activity",1]
["glyoxylate cycle",3]
["glyoxylate metabolic process",4]
["glyoxylate reductase (NADP+) activity",4]
["glyoxysome",5]
["GMP biosynthetic process",1]
["GMP metabolic process",2]
["GMP synthase (glutamine-hydrolyzing) activity",1]
["GMP synthase activity",1]
["Golgi apparatus",163]
["Golgi apparatus subcompartment",76]
["Golgi calcium ion homeostasis",1]
["Golgi calcium ion transmembrane transport",1]
["Golgi calcium ion transport",1]
["Golgi cisterna",4]
["Golgi medial cisterna",3]
["Golgi membrane",23]
["Golgi organization",9]
["Golgi stack",7]
["Golgi to endosome transport",1]
["Golgi to lysosome transport",1]
["Golgi to plasma membrane protein transport",1]
["Golgi to plasma membrane transport",3]
["Golgi to vacuole transport",4]
["Golgi trans cisterna",2]
["Golgi transport complex",3]
["Golgi vesicle budding",2]
["Golgi vesicle docking",1]
["Golgi vesicle prefusion complex stabilization",1]
["Golgi vesicle transport",22]
["Golgi-associated vesicle",11]
["Golgi-associated vesicle membrane",8]
["gonad development",2]
["GPI anchor biosynthetic process",5]
["GPI anchor metabolic process",5]
["GPI-anchor transamidase activity",1]
["GPI-anchor transamidase complex",3]
["Gram-positive-bacterium-type cell wall",1]
["granulocyte activation",4]
["gravitropism",8]
["Group II intron splicing",2]
["growing cell tip",1]
["growth",72]
["growth cone",1]
["GTP binding",15]
["GTP biosynthetic process",2]
["GTP cyclohydrolase activity",1]
["GTP cyclohydrolase I activity",1]
["GTP diphosphokinase activity",2]
["GTP metabolic process",3]
["GTP-dependent protein binding",1]
["GTPase activator activity",11]
["GTPase activity",27]
["GTPase binding",25]
["GTPase complex",2]
["GTPase inhibitor activity",1]
["GTPase regulator activity",13]
["guanine deaminase activity",1]
["guanine metabolic process",1]
["guanine/thymine mispair binding",1]
["guanosine tetraphosphate metabolic process",1]
["guanosine-3'-5'-bis(diphosphate) 3'-diphosphatase activity",1]
["guanosine-containing compound biosynthetic process",3]
["guanosine-containing compound metabolic process",5]
["guanosine-diphosphatase activity",1]
["guanyl nucleotide binding",15]
["guanyl ribonucleotide binding",15]
["guanyl-nucleotide exchange factor activity",11]
["guanylate kinase activity",1]
["guanylyltransferase activity",1]
["guard cell differentiation",1]
["guard cell fate commitment",1]
["guard mother cell cytokinesis",1]
["gynoecium development",13]
["H3 histone acetyltransferase activity",1]
["H3K27me3 modified histone binding",1]
["H4 histone acetyltransferase activity",2]
["H4K20me3 modified histone binding",1]
["hair cycle",2]
["hair cycle process",2]
["hair follicle development",2]
["hair follicle maturation",1]
["hair follicle placode formation",1]
["head development",6]
["heart development",3]
["heart formation",1]
["heart morphogenesis",1]
["heat acclimation",2]
["heat shock protein binding",6]
["helicase activity",77]
["hematopoietic or lymphoid organ development",4]
["hematopoietic progenitor cell differentiation",1]
["heme binding",2]
["heme biosynthetic process",5]
["heme metabolic process",6]
["heme oxidation",1]
["heme oxygenase (decyclizing) activity",1]
["heme transport",1]
["hemicellulose metabolic process",6]
["hemopoiesis",2]
["hemostasis",3]
["heparan sulfate 6-O-sulfotransferase activity",1]
["heparan sulfate proteoglycan biosynthetic process",1]
["heparan sulfate proteoglycan biosynthetic process- enzymatic modification",1]
["heparan sulfate proteoglycan metabolic process",1]
["heparan sulfate sulfotransferase activity",1]
["hepaticobiliary system development",1]
["heterochromatin",5]
["heterochromatin assembly",4]
["heterochromatin assembly by small RNA",2]
["heterochromatin maintenance",1]
["heterochromatin organization",4]
["heterocycle biosynthetic process",150]
["heterocycle catabolic process",66]
["heterocycle metabolic process",489]
["heterocyclic compound binding",311]
["heteroduplex DNA loop binding",2]
["heteropolysaccharide binding",1]
["heterotrimeric G-protein complex",2]
["hexokinase activity",1]
["hexosaminidase activity",1]
["hexose biosynthetic process",7]
["hexose catabolic process",4]
["hexose metabolic process",16]
["hexose transmembrane transport",6]
["hexose transmembrane transporter activity",6]
["hexosyltransferase activity",48]
["high-affinity arginine transmembrane transporter activity",1]
["high-affinity basic amino acid transmembrane transporter activity",1]
["high-affinity lysine transmembrane transporter activity",1]
["hippocampus development",2]
["histidine biosynthetic process",5]
["histidine metabolic process",5]
["histidine phosphotransfer kinase activity",1]
["histidinol-phosphatase activity",2]
["histoblast morphogenesis",1]
["histone acetylation",7]
["histone acetyltransferase activity",3]
["histone acetyltransferase activity (H4-K5 specific)",1]
["histone acetyltransferase complex",4]
["histone arginine methylation",6]
["histone binding",16]
["histone biotinylation",1]
["histone deacetylase activity",1]
["histone deacetylase activity (H4-K16 specific)",1]
["histone deacetylase binding",2]
["histone deacetylase complex",2]
["histone deacetylation",3]
["histone demethylase activity",1]
["histone demethylase activity (H3-K9 specific)",1]
["histone demethylation",2]
["histone exchange",2]
["histone H2A monoubiquitination",1]
["histone H2A ubiquitination",1]
["histone H3 acetylation",3]
["histone H3 deacetylation",2]
["histone H3-K27 methylation",3]
["histone H3-K27 trimethylation",1]
["histone H3-K36 methylation",2]
["histone H3-K4 methylation",5]
["histone H3-K4 trimethylation",2]
["histone H3-K9 acetylation",1]
["histone H3-K9 demethylation",2]
["histone H3-K9 methylation",1]
["histone H3-K9 modification",2]
["histone H3-R17 methylation",1]
["histone H3-R2 methylation",1]
["histone H3-R26 methylation",1]
["histone H3-S10 phosphorylation",1]
["histone H4 acetylation",4]
["histone H4 deacetylation",2]
["histone H4-K20 methylation",1]
["histone H4-K20 trimethylation",1]
["histone H4-K5 acetylation",1]
["histone H4-R3 methylation",2]
["histone kinase activity",1]
["histone kinase activity (H3-S10 specific)",1]
["histone lysine demethylation",2]
["histone lysine methylation",11]
["histone methylation",17]
["histone methyltransferase activity",10]
["histone methyltransferase activity (H3-K27 specific)",1]
["histone methyltransferase activity (H3-K36 specific)",1]
["histone methyltransferase activity (H3-K4 specific)",1]
["histone methyltransferase complex",4]
["histone modification",30]
["histone monoubiquitination",1]
["histone mRNA catabolic process",4]
["histone mRNA metabolic process",4]
["histone phosphorylation",1]
["histone pre-mRNA 3'end processing complex",1]
["histone serine kinase activity",1]
["histone ubiquitination",1]
["histone-arginine N-methyltransferase activity",5]
["histone-lysine N-methyltransferase activity",5]
["histone-serine phosphorylation",1]
["Holliday junction resolvase complex",1]
["homeostasis of number of cells",1]
["homeostatic process",77]
["homocysteine metabolic process",2]
["homogalacturonan biosynthetic process",1]
["homogalacturonan metabolic process",1]
["homogentisate catabolic process",2]
["homogentisate metabolic process",2]
["homologous chromosome pairing at meiosis",6]
["homologous chromosome segregation",9]
["homologous recombination",14]
["homomethionine metabolic process",1]
["homoserine biosynthetic process",1]
["homoserine dehydrogenase activity",1]
["homoserine metabolic process",2]
["HOPS complex",5]
["hormone binding",6]
["hormone biosynthetic process",16]
["hormone catabolic process",2]
["hormone metabolic process",22]
["hormone receptor binding",3]
["hormone transport",14]
["hormone-mediated signaling pathway",37]
["host cell",1]
["host cell nuclear part",1]
["host cell nucleus",1]
["host cell part",1]
["host cellular component",1]
["host intracellular membrane-bounded organelle",1]
["host intracellular organelle",1]
["host intracellular part",1]
["host intracellular region",1]
["Hrd1p ubiquitin ligase complex",1]
["HslUV protease complex",1]
["Hsp70 protein binding",2]
["Hsp90 protein binding",2]
["hydro-lyase activity",14]
["hydrogen peroxide biosynthetic process",3]
["hydrogen peroxide catabolic process",6]
["hydrogen peroxide mediated signaling pathway",1]
["hydrogen peroxide metabolic process",9]
["hydrolase activity",364]
["hydrolase activity- acting on acid anhydrides",146]
["hydrolase activity- acting on acid anhydrides- in phosphorus-containing anhydrides",146]
["hydrolase activity- acting on acid carbon-carbon bonds",2]
["hydrolase activity- acting on acid carbon-carbon bonds- in ketonic substances",2]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds",21]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amides",4]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amidines",5]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amides",7]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amidines",6]
["hydrolase activity- acting on ester bonds",124]
["hydrolase activity- acting on ether bonds",1]
["hydrolase activity- acting on glycosyl bonds",35]
["hydrolase activity- hydrolyzing N-glycosyl compounds",5]
["hydrolase activity- hydrolyzing O-glycosyl compounds",30]
["hydroquinone:oxygen oxidoreductase activity",2]
["hydroxyacylglutathione hydrolase activity",1]
["hydroxycinnamoyltransferase activity",1]
["hydroxyethylthiazole kinase activity",1]
["hydroxymethyl-- formyl- and related transferase activity",3]
["hydroxymethylbilane synthase activity",1]
["hydroxymethylglutaryl-CoA lyase activity",1]
["hydroxymethylpyrimidine kinase activity",1]
["hydroxyproline O-arabinosyltransferase activity",1]
["hydroxyproline O-galactosyltransferase activity",3]
["hydroxypyruvate reductase activity",3]
["hyperosmotic response",13]
["hyperosmotic salinity response",6]
["hypotonic response",3]
["hypotonic salinity response",2]
["I band",1]
["icosanoid biosynthetic process",1]
["icosanoid metabolic process",3]
["icosanoid secretion",1]
["icosanoid transport",1]
["identical protein binding",81]
["IgE binding",2]
["imaginal disc development",4]
["imaginal disc morphogenesis",1]
["imaginal disc pattern formation",1]
["imidazole-containing compound metabolic process",5]
["imidazoleglycerol-phosphate dehydratase activity",1]
["immune effector process",12]
["immune response",41]
["immune response-activating cell surface receptor signaling pathway",3]
["immune response-activating signal transduction",4]
["immune response-regulating cell surface receptor signaling pathway",3]
["immune response-regulating signaling pathway",4]
["immune system development",5]
["immune system process",60]
["immunoglobulin binding",2]
["immunoglobulin production",1]
["IMP biosynthetic process",1]
["IMP dehydrogenase activity",1]
["IMP metabolic process",2]
["import across plasma membrane",1]
["import into cell",17]
["import into nucleus",14]
["in utero embryonic development",4]
["inactivation of MAPK activity",3]
["inclusion body assembly",1]
["indolalkylamine biosynthetic process",2]
["indolalkylamine catabolic process",2]
["indolalkylamine metabolic process",4]
["indole glucosinolate catabolic process",2]
["indole glucosinolate metabolic process",2]
["indole-3-glycerol-phosphate synthase activity",1]
["indole-containing compound biosynthetic process",2]
["indole-containing compound catabolic process",4]
["indole-containing compound metabolic process",7]
["indoleacetic acid biosynthetic process",1]
["indoleacetic acid metabolic process",1]
["indolebutyric acid metabolic process",1]
["induced systemic resistance",5]
["induced systemic resistance- ethylene mediated signaling pathway",3]
["induced systemic resistance- jasmonic acid mediated signaling pathway",2]
["induction by symbiont of host defense response",2]
["induction by symbiont of host immune response",2]
["induction by symbiont of host innate immune response",2]
["inductive cell-cell signaling",1]
["inflammatory response",1]
["inflorescence development",2]
["innate immune response",36]
["innate immune response activating cell surface receptor signaling pathway",1]
["innate immune response-activating signal transduction",10]
["inner dynein arm assembly",2]
["inner ear development",2]
["inner ear morphogenesis",1]
["inner ear receptor cell development",1]
["inner ear receptor cell differentiation",1]
["inner ear receptor cell stereocilium organization",1]
["inner mitochondrial membrane organization",2]
["inner mitochondrial membrane protein complex",13]
["Ino80 complex",1]
["INO80-type complex",2]
["inorganic anion transmembrane transport",10]
["inorganic anion transmembrane transporter activity",16]
["inorganic anion transport",19]
["inorganic cation import across plasma membrane",1]
["inorganic cation transmembrane transport",85]
["inorganic cation transmembrane transporter activity",69]
["inorganic diphosphatase activity",1]
["inorganic ion homeostasis",33]
["inorganic ion import across plasma membrane",1]
["inorganic ion transmembrane transport",51]
["inorganic molecular entity transmembrane transporter activity",89]
["inorganic phosphate transmembrane transporter activity",5]
["inositol biosynthetic process",2]
["inositol bisphosphate phosphatase activity",1]
["inositol hexakisphosphate binding",2]
["inositol lipid-mediated signaling",1]
["inositol metabolic process",4]
["inositol monophosphate 1-phosphatase activity",2]
["inositol monophosphate phosphatase activity",3]
["inositol oxygenase activity",1]
["inositol phosphate biosynthetic process",4]
["inositol phosphate catabolic process",3]
["inositol phosphate dephosphorylation",3]
["inositol phosphate metabolic process",7]
["inositol phosphate phosphatase activity",6]
["inositol phosphate-mediated signaling",1]
["inositol tetrakisphosphate 1-kinase activity",1]
["inositol tetrakisphosphate 3-kinase activity",1]
["inositol tetrakisphosphate 6-kinase activity",1]
["inositol tetrakisphosphate kinase activity",2]
["inositol tetrakisphosphate phosphatase activity",1]
["inositol trisphosphate kinase activity",2]
["inositol trisphosphate phosphatase activity",1]
["inositol-1-3-4-5-tetrakisphosphate 3-phosphatase activity",1]
["inositol-1-3-4-trisphosphate 5-kinase activity",1]
["inositol-1-3-4-trisphosphate 6-kinase activity",2]
["inositol-1-4-5-trisphosphate 5-phosphatase activity",1]
["inositol-1-4-5-trisphosphate 6-kinase activity",1]
["inositol-3-phosphate synthase activity",1]
["instar larval or pupal development",2]
["instar larval or pupal morphogenesis",1]
["insulin receptor signaling pathway",1]
["integral component of chloroplast inner membrane",1]
["integral component of chloroplast outer membrane",5]
["integral component of cytoplasmic side of endoplasmic reticulum membrane",3]
["integral component of endoplasmic reticulum membrane",20]
["integral component of Golgi membrane",3]
["integral component of lumenal side of endoplasmic reticulum membrane",3]
["integral component of membrane",101]
["integral component of mitochondrial inner membrane",2]
["integral component of mitochondrial membrane",6]
["integral component of mitochondrial outer membrane",2]
["integral component of organelle membrane",19]
["integral component of peroxisomal membrane",4]
["integral component of plasma membrane",27]
["integral component of plastid inner membrane",1]
["integral component of plastid membrane",6]
["integral component of plastid outer membrane",5]
["intercalated disc",1]
["intercellular transport",2]
["intermediate filament cytoskeleton",1]
["intermembrane lipid transfer",1]
["internal peptidyl-lysine acetylation",7]
["internal protein amino acid acetylation",7]
["interstrand cross-link repair",5]
["intra-Golgi vesicle-mediated transport",4]
["intracellular anatomical structure",1761]
["intracellular cAMP-activated cation channel activity",1]
["intracellular cGMP-activated cation channel activity",1]
["intracellular cyclic nucleotide activated cation channel activity",2]
["intracellular ligand-gated ion channel activity",2]
["intracellular lipid transport",1]
["intracellular membrane-bounded organelle",1455]
["intracellular mRNA localization",4]
["intracellular non-membrane-bounded organelle",280]
["intracellular organelle",1517]
["intracellular organelle lumen",300]
["intracellular pH reduction",4]
["intracellular protein transmembrane transport",19]
["intracellular protein transport",88]
["intracellular receptor signaling pathway",5]
["intracellular signal transduction",57]
["intracellular transport",119]
["intracellular vesicle",114]
["intraciliary transport",2]
["intraciliary transport involved in cilium assembly",1]
["intraciliary transport particle",2]
["intraciliary transport particle B",2]
["intralumenal vesicle formation",1]
["intramolecular lyase activity",1]
["intramolecular oxidoreductase activity",17]
["intramolecular oxidoreductase activity- interconverting aldoses and ketoses",2]
["intramolecular oxidoreductase activity- transposing C=C bonds",3]
["intramolecular oxidoreductase activity- transposing S-S bonds",9]
["intramolecular transferase activity",14]
["intramolecular transferase activity- phosphotransferases",3]
["intramolecular transferase activity- transferring amino groups",1]
["intramolecular transferase activity- transferring hydroxy groups",1]
["intrinsic component of chloroplast inner membrane",1]
["intrinsic component of chloroplast outer membrane",5]
["intrinsic component of endoplasmic reticulum membrane",21]
["intrinsic component of Golgi membrane",3]
["intrinsic component of membrane",111]
["intrinsic component of mitochondrial inner membrane",3]
["intrinsic component of mitochondrial membrane",7]
["intrinsic component of mitochondrial outer membrane",2]
["intrinsic component of organelle membrane",21]
["intrinsic component of peroxisomal membrane",4]
["intrinsic component of plasma membrane",33]
["intrinsic component of plastid inner membrane",1]
["intrinsic component of plastid membrane",6]
["intrinsic component of plastid outer membrane",5]
["intrinsic component of synaptic vesicle membrane",1]
["inward rectifier potassium channel activity",3]
["ion antiporter activity involved in regulation of postsynaptic membrane potential",1]
["ion binding",179]
["ion channel activity",17]
["ion channel binding",1]
["ion gated channel activity",10]
["ion homeostasis",38]
["ion transmembrane transport",112]
["ion transmembrane transporter activity",102]
["ion transport",123]
["IRES-dependent viral translational initiation",1]
["iron chaperone activity",1]
["iron coordination entity transport",1]
["iron import into the mitochondrion",1]
["iron incorporation into metallo-sulfur cluster",1]
["iron ion binding",7]
["iron ion homeostasis",9]
["iron ion transmembrane transport",3]
["iron ion transmembrane transporter activity",3]
["iron ion transport",4]
["iron-sulfur cluster assembly",6]
["iron-sulfur cluster binding",5]
["isoamylase activity",3]
["isoamylase complex",2]
["isocitrate dehydrogenase (NAD+) activity",1]
["isocitrate dehydrogenase activity",1]
["isocitrate lyase activity",1]
["isocitrate metabolic process",1]
["isoleucine biosynthetic process",2]
["isoleucine metabolic process",2]
["isomerase activity",62]
["isopentenyl diphosphate biosynthetic process",6]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",4]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process",1]
["isopentenyl diphosphate biosynthetic process- mevalonate pathway",1]
["isopentenyl diphosphate metabolic process",6]
["isoprenoid binding",2]
["isoprenoid biosynthetic process",29]
["isoprenoid catabolic process",2]
["isoprenoid metabolic process",36]
["isoprenoid transport",1]
["isovaleryl-CoA dehydrogenase activity",1]
["isovaleryl-CoA(4-) catabolic process",1]
["isovaleryl-CoA(4-) metabolic process",1]
["ISWI-type complex",1]
["jasmonic acid and ethylene-dependent systemic resistance",4]
["jasmonic acid and ethylene-dependent systemic resistance- ethylene mediated signaling pathway",1]
["jasmonic acid and ethylene-dependent systemic resistance- jasmonic acid mediated signaling pathway",2]
["jasmonic acid biosynthetic process",4]
["jasmonic acid mediated signaling pathway",10]
["jasmonic acid metabolic process",4]
["K48-linked polyubiquitin modification-dependent protein binding",1]
["K63-linked polyubiquitin modification-dependent protein binding",1]
["karyogamy",3]
["ketone biosynthetic process",4]
["ketone catabolic process",3]
["kidney development",1]
["kinase activator activity",2]
["kinase activity",113]
["kinase binding",11]
["kinase regulator activity",7]
["kinesin binding",3]
["kinesin complex",9]
["kinetochore",17]
["kinetochore assembly",3]
["kinetochore binding",4]
["kinetochore microtubule",4]
["kinetochore organization",3]
["kinocilium",1]
["Krueppel-associated box domain binding",1]
["kynurenine aminotransferase activity",1]
["kynurenine metabolic process",1]
["kynurenine-oxoglutarate transaminase activity",1]
["L-alanine catabolic process",1]
["L-alanine catabolic process- by transamination",1]
["L-alanine metabolic process",1]
["L-alanine:2-oxoglutarate aminotransferase activity",2]
["L-alpha-amino acid transmembrane transport",6]
["L-amino acid transmembrane transporter activity",6]
["L-amino acid transport",6]
["L-arginine transmembrane transport",1]
["L-arginine transport",1]
["L-ascorbate peroxidase activity",1]
["L-ascorbic acid biosynthetic process",2]
["L-ascorbic acid metabolic process",2]
["L-ascorbic acid transmembrane transport",1]
["L-ascorbic acid transmembrane transporter activity",1]
["L-aspartate:2-oxoglutarate aminotransferase activity",3]
["L-cysteine desulfhydrase activity",1]
["L-cystine transmembrane transporter activity",1]
["L-cystine transport",1]
["L-fucose catabolic process",1]
["L-fucose metabolic process",1]
["L-galactose dehydrogenase activity",1]
["L-galactose-1-phosphate phosphatase activity",1]
["L-glutamate transmembrane transport",1]
["L-glutamate transmembrane transporter activity",1]
["L-glutamine aminotransferase activity",1]
["L-glutamine:pyruvate aminotransferase activity",1]
["L-gulono-1-4-lactone dehydrogenase activity",1]
["L-histidine transmembrane transport",1]
["L-histidine transmembrane transporter activity",1]
["L-kynurenine metabolic process",1]
["L-L-diaminopimelate aminotransferase activity",1]
["L-lysine transmembrane transport",1]
["L-lysine transmembrane transporter activity",1]
["L-lysine transport",1]
["L-malate dehydrogenase activity",3]
["L-methionine biosynthetic process",2]
["L-methionine biosynthetic process from L-homoserine via cystathionine",1]
["L-methionine salvage",1]
["L-methionine salvage from methylthioadenosine",1]
["L-ornithine transmembrane transport",1]
["L-ornithine transmembrane transporter activity",1]
["L-phenylalanine aminotransferase activity",1]
["L-phenylalanine biosynthetic process",2]
["L-phenylalanine catabolic process",1]
["L-phenylalanine metabolic process",4]
["L-phenylalanine:pyruvate aminotransferase activity",1]
["L-serine ammonia-lyase activity",1]
["L-serine biosynthetic process",2]
["L-serine metabolic process",3]
["L-serine transmembrane transporter activity",1]
["L-serine transport",1]
["L-threonine ammonia-lyase activity",1]
["L-tryptophan aminotransferase activity",1]
["L-tryptophan:2-oxoglutarate aminotransferase activity",1]
["L-tryptophan:pyruvate aminotransferase activity",1]
["lactate biosynthetic process",1]
["lactate dehydrogenase activity",2]
["lactate metabolic process",3]
["lactate oxidation",1]
["lactone biosynthetic process",3]
["lactone metabolic process",3]
["lactoylglutathione lyase activity",1]
["lagging strand elongation",2]
["lamellar body",1]
["large ribosomal subunit",8]
["larval central nervous system remodeling",1]
["larval development",3]
["late endosome",19]
["late endosome membrane",8]
["late endosome to lysosome transport",1]
["late endosome to vacuole transport",9]
["late endosome to vacuole transport via multivesicular body sorting pathway",3]
["late nucleophagy",2]
["lateral attachment of mitotic spindle microtubules to kinetochore",3]
["lateral root branching",1]
["lateral root development",21]
["lateral root formation",11]
["lateral root morphogenesis",12]
["leading edge membrane",1]
["leaf development",48]
["leaf formation",1]
["leaf morphogenesis",12]
["leaf senescence",18]
["leaf shaping",1]
["leaf vascular tissue pattern formation",7]
["leak channel activity",1]
["learning",3]
["learning or memory",3]
["leucine biosynthetic process",2]
["leucine catabolic process",3]
["leucine metabolic process",5]
["leucine-tRNA ligase activity",2]
["leucoplast",1]
["leucyl-tRNA aminoacylation",2]
["leukocyte activation",4]
["leukocyte activation involved in immune response",4]
["leukocyte chemotaxis",1]
["leukocyte degranulation",3]
["leukocyte mediated immunity",3]
["leukocyte migration",1]
["ligand-gated cation channel activity",4]
["ligand-gated channel activity",5]
["ligand-gated ion channel activity",5]
["ligase activity",40]
["ligase activity- forming carbon-carbon bonds",2]
["ligase activity- forming carbon-nitrogen bonds",9]
["ligase activity- forming carbon-oxygen bonds",16]
["ligase activity- forming carbon-sulfur bonds",10]
["ligase activity- forming nitrogen-metal bonds",2]
["ligase activity- forming nitrogen-metal bonds- forming coordination complexes",2]
["ligase activity- forming phosphoric ester bonds",1]
["light-harvesting complex",1]
["lignin biosynthetic process",3]
["lignin metabolic process",3]
["limb development",3]
["limb morphogenesis",2]
["limbic system development",2]
["limit dextrinase activity",1]
["linoleate 13S-lipoxygenase activity",1]
["linoleic acid metabolic process",1]
["lipase activator activity",1]
["lipase activity",15]
["lipid binding",25]
["lipid biosynthetic process",94]
["lipid catabolic process",26]
["lipid droplet",5]
["lipid droplet organization",1]
["lipid glycosylation",1]
["lipid homeostasis",7]
["lipid kinase activity",1]
["lipid localization",17]
["lipid metabolic process",147]
["lipid modification",20]
["lipid oxidation",16]
["lipid phosphorylation",2]
["lipid storage",2]
["lipid transfer activity",1]
["lipid translocation",2]
["lipid transport",15]
["lipid transporter activity",8]
["lipid X metabolic process",1]
["lipoate biosynthetic process",2]
["lipoate metabolic process",2]
["lipoate synthase activity",2]
["lipophagy",1]
["lipopolysaccharide binding",1]
["lipopolysaccharide biosynthetic process",1]
["lipopolysaccharide metabolic process",1]
["lipoprotein biosynthetic process",10]
["lipoprotein catabolic process",1]
["lipoprotein metabolic process",11]
["liposaccharide metabolic process",16]
["lipoyl(octanoyl) transferase activity",1]
["liver development",1]
["localization",371]
["localization of cell",10]
["localization within membrane",2]
["locomotion",20]
["locomotory behavior",2]
["locomotory exploration behavior",1]
["long-chain fatty acid biosynthetic process",1]
["long-chain fatty acid import into cell",1]
["long-chain fatty acid metabolic process",8]
["long-chain fatty acid transport",2]
["long-chain fatty acid-CoA ligase activity",3]
["long-chain fatty-acyl-CoA metabolic process",1]
["long-chain-enoyl-CoA hydratase activity",1]
["long-day photoperiodism",4]
["long-day photoperiodism- flowering",2]
["long-distance posttranscriptional gene silencing",1]
["long-term synaptic potentiation",1]
["longitudinal axis specification",1]
["low-affinity phosphate transmembrane transporter activity",1]
["Lsm1-7-Pat1 complex",1]
["lumenal side of endoplasmic reticulum membrane",3]
["lung development",2]
["lung vasculature development",1]
["lyase activity",38]
["lycopene beta cyclase activity",2]
["lycopene biosynthetic process",1]
["lycopene epsilon cyclase activity",1]
["lycopene metabolic process",1]
["lysine biosynthetic process",1]
["lysine biosynthetic process via aminoadipic acid",1]
["lysine metabolic process",1]
["lysine N-methyltransferase activity",7]
["lysine-acetylated histone binding",2]
["lysine-tRNA ligase activity",1]
["lysophosphatidic acid acyltransferase activity",1]
["lysophosphatidic acid phosphatase activity",1]
["lysophosphatidylethanolamine acyltransferase activity",1]
["lysophospholipase activity",1]
["lysophospholipid acyltransferase activity",3]
["lysosomal lumen",1]
["lysosomal membrane",12]
["lysosomal microautophagy",2]
["lysosomal transport",12]
["lysosome",21]
["lysosome organization",6]
["lytic vacuole",25]
["lytic vacuole membrane",13]
["lytic vacuole organization",7]
["lytic vacuole within protein storage vacuole",1]
["m7G(5')pppN diphosphatase activity",1]
["macroautophagy",16]
["macrolide binding",6]
["macromolecule biosynthetic process",207]
["macromolecule catabolic process",129]
["macromolecule deacylation",4]
["macromolecule depalmitoylation",1]
["macromolecule glycosylation",33]
["macromolecule localization",140]
["macromolecule metabolic process",768]
["macromolecule methylation",42]
["macromolecule modification",346]
["macromolecule transmembrane transporter activity",6]
["macropinosome",1]
["magnesium chelatase activity",2]
["magnesium chelatase complex",3]
["magnesium ion binding",16]
["magnesium ion homeostasis",1]
["magnesium ion transmembrane transport",4]
["magnesium ion transmembrane transporter activity",4]
["magnesium ion transport",5]
["magnesium protoporphyrin IX methyltransferase activity",1]
["magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity",1]
["maintenance of cell number",13]
["maintenance of DNA methylation",1]
["maintenance of DNA repeat elements",2]
["maintenance of dormancy",2]
["maintenance of floral organ identity",1]
["maintenance of inflorescence meristem identity",1]
["maintenance of location",5]
["maintenance of location in cell",3]
["maintenance of meristem identity",9]
["maintenance of mitotic sister chromatid cohesion",1]
["maintenance of plant organ identity",1]
["maintenance of protein localization in endoplasmic reticulum",1]
["maintenance of protein localization in organelle",3]
["maintenance of protein location",3]
["maintenance of protein location in cell",3]
["maintenance of protein location in nucleus",2]
["maintenance of rDNA",1]
["maintenance of root meristem identity",5]
["maintenance of seed dormancy",2]
["maintenance of shoot apical meristem identity",5]
["maintenance of sister chromatid cohesion",1]
["malate dehydrogenase (decarboxylating) (NAD+) activity",1]
["malate dehydrogenase activity",4]
["malate metabolic process",3]
["malate synthase activity",1]
["malate transmembrane transport",5]
["malate transmembrane transporter activity",5]
["malate transport",5]
["male gamete generation",17]
["male meiosis chromosome segregation",1]
["male meiosis cytokinesis",5]
["male meiotic nuclear division",10]
["male-female gamete recognition during double fertilization forming a zygote and endosperm",1]
["maleylacetoacetate isomerase activity",1]
["malic enzyme activity",1]
["maltose catabolic process",1]
["maltose metabolic process",2]
["maltose transmembrane transporter activity",1]
["maltose transport",1]
["mandelonitrile lyase activity",1]
["manganese ion binding",7]
["manganese ion transmembrane transport",5]
["manganese ion transmembrane transporter activity",5]
["manganese ion transport",5]
["mannan catabolic process",1]
["mannan endo-1-4-beta-mannosidase activity",1]
["mannan metabolic process",2]
["mannan synthase activity",2]
["mannose metabolic process",1]
["mannosidase activity",6]
["mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity",1]
["mannosyl-oligosaccharide 1-2-alpha-mannosidase activity",4]
["mannosyl-oligosaccharide 1-3-1-6-alpha-mannosidase activity",1]
["mannosyl-oligosaccharide mannosidase activity",5]
["mannosylation",6]
["mannosyltransferase activity",6]
["MAP kinase activity",4]
["MAP kinase kinase activity",2]
["MAP kinase kinase kinase activity",2]
["MAP kinase phosphatase activity",3]
["MAP kinase serine/threonine phosphatase activity",2]
["MAP kinase tyrosine phosphatase activity",1]
["MAPK cascade",7]
["mating",1]
["mating behavior",1]
["mating projection",3]
["mating projection tip",3]
["maturation of 5.8S rRNA",14]
["maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",10]
["maturation of LSU-rRNA",13]
["maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",8]
["maturation of SSU-rRNA",14]
["maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",10]
["mature ribosome assembly",1]
["MCM complex",3]
["Mcs4 RR-MAPKKK complex",1]
["mechanoreceptor differentiation",1]
["mechanosensitive ion channel activity",2]
["mediator complex",12]
["medium-chain fatty acid metabolic process",1]
["medium-chain fatty acid-CoA ligase activity",1]
["megagametogenesis",7]
["meiosis I",20]
["meiosis I cell cycle process",22]
["meiosis II",2]
["meiosis II cell cycle process",2]
["meiotic cell cycle",35]
["meiotic cell cycle checkpoint signaling",2]
["meiotic cell cycle process",33]
["meiotic chromosome segregation",15]
["meiotic chromosome separation",7]
["meiotic cytokinesis",5]
["meiotic DNA double-strand break formation",1]
["meiotic DNA double-strand break processing",1]
["meiotic DNA recombinase assembly",1]
["meiotic gene conversion",2]
["meiotic mismatch repair",1]
["meiotic nuclear division",29]
["meiotic recombination checkpoint signaling",1]
["meiotic sister chromatid cohesion",1]
["meiotic sister chromatid cohesion- centromeric",1]
["meiotic sister chromatid segregation",1]
["meiotic spindle assembly checkpoint signaling",1]
["meiotic spindle checkpoint signaling",1]
["meiotic spindle organization",1]
["meiotic spindle pole body",1]
["melibiose catabolic process",1]
["melibiose metabolic process",1]
["membrane",829]
["membrane coat",8]
["membrane depolarization",1]
["membrane depolarization during action potential",1]
["membrane docking",7]
["membrane fission",2]
["membrane fusion",15]
["membrane invagination",1]
["membrane lipid biosynthetic process",22]
["membrane lipid catabolic process",4]
["membrane lipid metabolic process",29]
["membrane organization",45]
["membrane protein complex",77]
["membrane protein intracellular domain proteolysis",1]
["membrane protein proteolysis",2]
["membrane protein proteolysis involved in retrograde protein transport- ER to cytosol",1]
["membrane-bounded organelle",1482]
["membrane-enclosed lumen",300]
["memory",3]
["meristem determinacy",1]
["meristem development",38]
["meristem growth",3]
["meristem initiation",7]
["meristem maintenance",24]
["meristem structural organization",9]
["mesoderm development",2]
["mesoderm formation",1]
["mesoderm morphogenesis",1]
["messenger ribonucleoprotein complex assembly",1]
["metabolic process",1250]
["metal cluster binding",5]
["metal incorporation into metallo-molybdopterin complex",1]
["metal incorporation into metallo-sulfur cluster",1]
["metal ion binding",90]
["metal ion homeostasis",23]
["metal ion transmembrane transporter activity",30]
["metal ion transport",53]
["metal ion:proton antiporter activity",1]
["metallo-sulfur cluster assembly",6]
["metalloaminopeptidase activity",2]
["metallochaperone activity",1]
["metalloendopeptidase activity",6]
["metalloexopeptidase activity",2]
["metallopeptidase activity",15]
["metamorphosis",1]
["metaphase plate congression",10]
["metaxylem development",1]
["methenyltetrahydrofolate cyclohydrolase activity",1]
["methionine biosynthetic process",4]
["methionine metabolic process",5]
["methionine synthase activity",1]
["methionine-oxo-acid transaminase activity",1]
["methionine-tRNA ligase activity",1]
["methionyl-tRNA aminoacylation",1]
["methotrexate transmembrane transporter activity",1]
["methotrexate transport",1]
["methylated histone binding",4]
["methylation",61]
["methylation-dependent protein binding",4]
["methylcrotonoyl-CoA carboxylase activity",1]
["methylcytosine dioxygenase activity",1]
["methylenetetrahydrofolate dehydrogenase (NADP+) activity",1]
["methylenetetrahydrofolate reductase (NAD(P)H) activity",1]
["methylglyoxal catabolic process",3]
["methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione",1]
["methylglyoxal catabolic process to lactate",2]
["methylglyoxal metabolic process",3]
["methylthioadenosine nucleosidase activity",1]
["methylthiotransferase activity",1]
["methyltransferase activity",47]
["methyltransferase complex",10]
["MHC class I protein binding",1]
["MHC class II protein binding",1]
["MHC protein binding",2]
["microbody",46]
["microbody membrane",10]
["microgametogenesis",6]
["microsporogenesis",2]
["microtubule",17]
["microtubule associated complex",10]
["microtubule binding",16]
["microtubule bundle formation",6]
["microtubule cytoskeleton",41]
["microtubule cytoskeleton organization",35]
["microtubule cytoskeleton organization involved in mitosis",13]
["microtubule depolymerization",2]
["microtubule end",1]
["microtubule minus-end binding",1]
["microtubule motor activity",9]
["microtubule nucleation",2]
["microtubule nucleation by interphase microtubule organizing center",1]
["microtubule nucleation by microtubule organizing center",1]
["microtubule organizing center",11]
["microtubule organizing center organization",5]
["microtubule plus-end",1]
["microtubule plus-end binding",1]
["microtubule plus-end directed mitotic chromosome migration",3]
["microtubule polymerization",2]
["microtubule polymerization or depolymerization",4]
["microtubule severing",2]
["microtubule-based movement",18]
["microtubule-based process",41]
["microtubule-based transport",5]
["microtubule-severing ATPase activity",2]
["midbody",5]
["minus-end kinesin complex",1]
["miRNA catabolic process",3]
["miRNA export from nucleus",1]
["miRNA loading onto RISC involved in gene silencing by miRNA",2]
["miRNA metabolic process",3]
["miRNA transport",2]
["mismatch repair",7]
["mismatch repair complex",3]
["mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication",1]
["mismatched DNA binding",3]
["mitochondria-nucleus signaling pathway",2]
["mitochondrial ADP transmembrane transport",1]
["mitochondrial alpha-ketoglutarate dehydrogenase complex",2]
["mitochondrial ATP synthesis coupled electron transport",3]
["mitochondrial ATP transmembrane transport",1]
["mitochondrial cytochrome c oxidase assembly",1]
["mitochondrial degradosome",1]
["mitochondrial DNA metabolic process",1]
["mitochondrial DNA replication",1]
["mitochondrial DNA-directed RNA polymerase complex",1]
["mitochondrial electron transfer flavoprotein complex",1]
["mitochondrial electron transport- NADH to ubiquinone",2]
["mitochondrial electron transport- succinate to ubiquinone",1]
["mitochondrial envelope",50]
["mitochondrial fission",5]
["mitochondrial gene expression",8]
["mitochondrial genome maintenance",2]
["mitochondrial glycyl-tRNA aminoacylation",1]
["mitochondrial inner membrane",39]
["mitochondrial intermembrane space",1]
["mitochondrial L-ornithine transmembrane transport",1]
["mitochondrial large ribosomal subunit",1]
["mitochondrial matrix",28]
["mitochondrial membrane",48]
["mitochondrial membrane organization",5]
["mitochondrial mRNA catabolic process",1]
["mitochondrial mRNA surveillance",1]
["mitochondrial ncRNA surveillance",1]
["mitochondrial nucleoid",2]
["mitochondrial outer membrane",8]
["mitochondrial outer membrane permeabilization",1]
["mitochondrial outer membrane permeabilization involved in programmed cell death",1]
["mitochondrial outer membrane translocase complex",1]
["mitochondrial protein catabolic process",1]
["mitochondrial protein-containing complex",21]
["mitochondrial proton-transporting ATP synthase complex",1]
["mitochondrial proton-transporting ATP synthase complex assembly",1]
["mitochondrial respirasome",8]
["mitochondrial respiratory chain complex assembly",1]
["mitochondrial respiratory chain complex I",6]
["mitochondrial respiratory chain complex II- succinate dehydrogenase complex (ubiquinone)",1]
["mitochondrial respiratory chain complex III",1]
["mitochondrial ribosome",2]
["mitochondrial RNA 3'-end processing",1]
["mitochondrial RNA catabolic process",2]
["mitochondrial RNA metabolic process",5]
["mitochondrial RNA modification",1]
["mitochondrial RNA processing",3]
["mitochondrial RNA surveillance",1]
["mitochondrial small ribosomal subunit",1]
["mitochondrial transcription",1]
["mitochondrial translation",4]
["mitochondrial translational elongation",2]
["mitochondrial translational termination",1]
["mitochondrial transmembrane transport",9]
["mitochondrial transport",23]
["mitochondrial tricarboxylic acid cycle enzyme complex",2]
["mitochondrial tRNA modification",1]
["mitochondrial tRNA processing",1]
["mitochondrial tRNA pseudouridine synthesis",1]
["mitochondrion",211]
["mitochondrion disassembly",7]
["mitochondrion localization",3]
["mitochondrion morphogenesis",1]
["mitochondrion organization",35]
["mitochondrion targeting sequence binding",1]
["mitochondrion transport along microtubule",3]
["mitophagy",1]
["mitotic cell cycle",53]
["mitotic cell cycle checkpoint signaling",13]
["mitotic cell cycle phase transition",10]
["mitotic cell cycle process",49]
["mitotic centrosome separation",1]
["mitotic chromosome condensation",2]
["mitotic chromosome movement towards spindle pole",4]
["mitotic cytokinesis",16]
["mitotic cytokinetic process",10]
["mitotic DNA damage checkpoint signaling",6]
["mitotic DNA integrity checkpoint signaling",7]
["mitotic DNA replication",2]
["mitotic DNA replication checkpoint signaling",1]
["mitotic DNA replication initiation",1]
["mitotic DNA replication preinitiation complex assembly",1]
["mitotic G1 DNA damage checkpoint signaling",6]
["mitotic G1/S transition checkpoint signaling",2]
["mitotic G2 DNA damage checkpoint signaling",4]
["mitotic G2/M transition checkpoint",3]
["mitotic intra-S DNA damage checkpoint signaling",3]
["mitotic metaphase plate congression",9]
["mitotic nuclear division",20]
["mitotic recombination",8]
["mitotic sister chromatid cohesion",1]
["mitotic sister chromatid segregation",14]
["mitotic sister chromatid separation",1]
["mitotic spindle",7]
["mitotic spindle assembly",3]
["mitotic spindle assembly checkpoint signaling",5]
["mitotic spindle checkpoint signaling",5]
["mitotic spindle disassembly",2]
["mitotic spindle midzone",3]
["mitotic spindle organization",13]
["mitotic spindle pole",1]
["mitotic spindle pole body",1]
["MLL1 complex",2]
["MLL1/2 complex",2]
["MLL3/4 complex",2]
["Mo-molybdopterin cofactor biosynthetic process",1]
["Mo-molybdopterin cofactor metabolic process",1]
["Mo-molybdopterin cofactor sulfurase activity",1]
["modification by symbiont of host cellular component",1]
["modification by symbiont of host structure",1]
["modification of cellular component in other organism involved in symbiotic interaction",1]
["modification of structure of other organism involved in symbiotic interaction",1]
["modification-dependent macromolecule catabolic process",58]
["modification-dependent protein binding",10]
["modification-dependent protein catabolic process",51]
["modified amino acid binding",1]
["modified amino acid transmembrane transporter activity",2]
["modified amino acid transport",4]
["modulation by host of symbiont process",2]
["modulation by host of viral genome replication",1]
["modulation by host of viral process",2]
["modulation by symbiont of host cellular process",1]
["modulation by symbiont of host defense response",6]
["modulation by symbiont of host immune response",6]
["modulation by symbiont of host innate immune response",6]
["modulation by symbiont of host process",6]
["modulation by virus of host process",1]
["modulation of chemical synaptic transmission",3]
["modulation of process of other organism",9]
["modulation of process of other organism involved in symbiotic interaction",8]
["molecular adaptor activity",8]
["molecular carrier activity",6]
["molecular function regulator",53]
["molecular transducer activity",28]
["molecular_function",1521]
["molting cycle",2]
["molting cycle process",2]
["molybdate ion export from vacuole",1]
["molybdate ion transmembrane transporter activity",1]
["molybdate ion transport",1]
["molybdenum incorporation into molybdenum-molybdopterin complex",1]
["molybdenum ion binding",1]
["molybdopterin adenylyltransferase activity",1]
["molybdopterin cofactor biosynthetic process",1]
["molybdopterin cofactor metabolic process",2]
["molybdopterin molybdotransferase activity",1]
["monocarboxylic acid binding",5]
["monocarboxylic acid biosynthetic process",36]
["monocarboxylic acid catabolic process",18]
["monocarboxylic acid metabolic process",79]
["monocarboxylic acid transmembrane transporter activity",5]
["monocarboxylic acid transport",7]
["monodehydroascorbate reductase (NADH) activity",2]
["monolayer-surrounded lipid storage body",1]
["monooxygenase activity",18]
["monopolar cell growth",1]
["monopolar spindle attachment to meiosis I kinetochore",2]
["monosaccharide binding",2]
["monosaccharide biosynthetic process",10]
["monosaccharide catabolic process",6]
["monosaccharide metabolic process",24]
["monosaccharide transmembrane transport",7]
["monosaccharide transmembrane transporter activity",7]
["monovalent cation:proton antiporter activity",2]
["monovalent inorganic anion homeostasis",2]
["monovalent inorganic cation homeostasis",9]
["morphogenesis of a branching structure",6]
["morphogenesis of a polarized epithelium",1]
["morphogenesis of an epithelium",4]
["morphogenesis of embryonic epithelium",1]
["motile cilium",3]
["motor activity",9]
["movement in host",1]
["movement in host environment",2]
["movement of cell or subcellular component",27]
["Mre11 complex",1]
["mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity",4]
["mRNA (adenine-N1-)-methyltransferase activity",1]
["mRNA 3'-end processing",13]
["mRNA 3'-splice site recognition",1]
["mRNA 3'-UTR AU-rich region binding",6]
["mRNA 3'-UTR binding",2]
["mRNA 5'-splice site recognition",1]
["mRNA alternative polyadenylation",1]
["mRNA binding",41]
["mRNA cap binding complex",3]
["mRNA catabolic process",27]
["mRNA cis splicing- via spliceosome",2]
["mRNA cleavage",7]
["mRNA cleavage and polyadenylation specificity factor complex",3]
["mRNA cleavage factor complex",7]
["mRNA cleavage involved in mRNA processing",1]
["mRNA destabilization",1]
["mRNA editing complex",2]
["mRNA export from nucleus",12]
["mRNA guanylyltransferase activity",1]
["mRNA metabolic process",82]
["mRNA methylation",6]
["mRNA methyltransferase activity",5]
["mRNA modification",9]
["mRNA polyadenylation",10]
["mRNA processing",49]
["mRNA pseudouridine synthesis",3]
["mRNA splice site selection",2]
["mRNA splicing- via spliceosome",33]
["mRNA stabilization",2]
["mRNA transcription",1]
["mRNA transport",12]
["mRNA-containing ribonucleoprotein complex export from nucleus",12]
["mucilage biosynthetic process",7]
["mucilage biosynthetic process involved in seed coat development",6]
["mucilage extrusion from seed coat",1]
["mucilage metabolic process",7]
["mucilage metabolic process involved in seed coat development",6]
["multi-eIF complex",1]
["multi-multicellular organism process",30]
["multi-organism carbohydrate catabolic process",1]
["multi-organism carbohydrate metabolic process",1]
["multi-organism catabolic process",1]
["multi-organism cellular localization",1]
["multi-organism cellular process",6]
["multi-organism intercellular transport",1]
["multi-organism localization",2]
["multi-organism metabolic process",1]
["multi-organism process",192]
["multi-organism reproductive process",32]
["multi-organism transport",2]
["multicellular organism development",366]
["multicellular organism reproduction",33]
["multicellular organismal homeostasis",3]
["multicellular organismal movement",1]
["multicellular organismal process",403]
["multicellular organismal reproductive process",31]
["multicellular organismal signaling",1]
["multicellular organismal water homeostasis",1]
["multidimensional cell growth",9]
["multimeric ribonuclease P complex",1]
["multivesicular body",4]
["multivesicular body membrane",1]
["multivesicular body sorting pathway",6]
["muscle cell development",1]
["muscle cell differentiation",2]
["muscle structure development",3]
["muscle tissue development",2]
["MutLalpha complex",1]
["MutSalpha complex",1]
["MutSbeta complex",1]
["mycotoxin biosynthetic process",1]
["mycotoxin metabolic process",1]
["myelin sheath",1]
["myelination",1]
["myeloid cell activation involved in immune response",4]
["myeloid leukocyte activation",4]
["myeloid leukocyte mediated immunity",3]
["myo-inositol hexakisphosphate biosynthetic process",4]
["myo-inositol hexakisphosphate metabolic process",4]
["myo-inositol transmembrane transporter activity",1]
["myo-inositol transport",1]
["myo-inositol:proton symporter activity",1]
["myoblast differentiation",1]
["myofibril",1]
["myosin binding",2]
["myosin heavy chain binding",1]
["myosin tail binding",1]
["myosin XI tail binding",1]
["myristoyltransferase activity",1]
["N-(long-chain-acyl)ethanolamine deacylase activity",1]
["N-acetyltransferase activity",6]
["N-acylethanolamine metabolic process",1]
["N-acylsphingosine amidohydrolase activity",1]
["N-acyltransferase activity",8]
["N-carbamoylputrescine amidase activity",1]
["N-glycan processing",8]
["N-methyltransferase activity",18]
["N-terminal peptidyl-glycine N-myristoylation",1]
["N-terminal protein amino acid modification",3]
["N-terminal protein lipidation",1]
["N-terminal protein myristoylation",1]
["N6-methyladenosine-containing RNA binding",1]
["N6-threonylcarbomyladenosine methylthiotransferase activity",1]
["NAD binding",6]
["NAD biosynthesis via nicotinamide riboside salvage pathway",1]
["NAD biosynthetic process",5]
["NAD metabolic process",9]
["NAD transmembrane transport",1]
["NAD transmembrane transporter activity",1]
["NAD transport",1]
["NAD(P)+ transhydrogenase activity",2]
["NAD(P)H dehydrogenase (quinone) activity",1]
["NAD(P)H dehydrogenase complex (plastoquinone)",2]
["NAD+ binding",1]
["NADH dehydrogenase (quinone) activity",1]
["NADH dehydrogenase (ubiquinone) activity",1]
["NADH dehydrogenase activity",4]
["NADH dehydrogenase complex",6]
["NADH dehydrogenase complex (plastoquinone) assembly",1]
["NADH dehydrogenase complex assembly",1]
["NADH metabolic process",6]
["NADH oxidation",1]
["NADH regeneration",1]
["NADHX epimerase activity",2]
["NADP binding",5]
["NADP metabolic process",7]
["NADPH binding",3]
["NADPH dehydrogenase activity",2]
["NADPH regeneration",1]
["NADPH-hemoprotein reductase activity",1]
["NADPH:quinone reductase activity",1]
["NADPHX epimerase activity",2]
["narrow pore channel activity",1]
["nBAF complex",1]
["ncRNA 3'-end processing",9]
["ncRNA 5'-end processing",3]
["ncRNA catabolic process",11]
["ncRNA export from nucleus",3]
["ncRNA metabolic process",105]
["ncRNA polyadenylation",2]
["ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process",1]
["ncRNA processing",84]
["Ndc80 complex",2]
["NEDD8 activating enzyme activity",2]
["NEDD8-specific protease activity",1]
["negative chemotaxis",2]
["negative gravitropism",1]
["negative regulation of abscisic acid biosynthetic process",1]
["negative regulation of abscisic acid-activated signaling pathway",8]
["negative regulation of actin filament depolymerization",1]
["negative regulation of actin filament polymerization",2]
["negative regulation of activin receptor signaling pathway",1]
["negative regulation of alcohol biosynthetic process",1]
["negative regulation of anthocyanin metabolic process",2]
["negative regulation of antisense RNA transcription",1]
["negative regulation of apoptotic process",9]
["negative regulation of apoptotic signaling pathway",2]
["negative regulation of asexual reproduction",1]
["negative regulation of ATP biosynthetic process",1]
["negative regulation of ATP metabolic process",1]
["negative regulation of autophagy",1]
["negative regulation of auxin mediated signaling pathway",2]
["negative regulation of auxin metabolic process",1]
["negative regulation of binding",2]
["negative regulation of biological process",204]
["negative regulation of biosynthetic process",53]
["negative regulation of BMP signaling pathway",1]
["negative regulation of bone development",1]
["negative regulation of brassinosteroid mediated signaling pathway",3]
["negative regulation of canonical Wnt signaling pathway",4]
["negative regulation of carbohydrate metabolic process",1]
["negative regulation of cardiac muscle cell apoptotic process",1]
["negative regulation of cardiac muscle cell proliferation",1]
["negative regulation of cardiac muscle tissue development",1]
["negative regulation of cardiac muscle tissue growth",1]
["negative regulation of catabolic process",8]
["negative regulation of catalytic activity",16]
["negative regulation of cation transmembrane transport",1]
["negative regulation of cell activation",1]
["negative regulation of cell communication",41]
["negative regulation of cell cycle",25]
["negative regulation of cell cycle G1/S phase transition",2]
["negative regulation of cell cycle G2/M phase transition",4]
["negative regulation of cell cycle phase transition",10]
["negative regulation of cell cycle process",20]
["negative regulation of cell death",15]
["negative regulation of cell development",2]
["negative regulation of cell differentiation",3]
["negative regulation of cell division",2]
["negative regulation of cell growth",2]
["negative regulation of cell population proliferation",8]
["negative regulation of cell projection organization",1]
["negative regulation of cell septum assembly",1]
["negative regulation of cell size",1]
["negative regulation of cellular amide metabolic process",6]
["negative regulation of cellular amine metabolic process",3]
["negative regulation of cellular amino acid metabolic process",3]
["negative regulation of cellular biosynthetic process",52]
["negative regulation of cellular carbohydrate metabolic process",1]
["negative regulation of cellular catabolic process",7]
["negative regulation of cellular component organization",24]
["negative regulation of cellular macromolecule biosynthetic process",43]
["negative regulation of cellular metabolic process",77]
["negative regulation of cellular process",147]
["negative regulation of cellular protein catabolic process",2]
["negative regulation of cellular protein metabolic process",22]
["negative regulation of cellular response to alcohol",8]
["negative regulation of cellular response to growth factor stimulus",1]
["negative regulation of cellular response to insulin stimulus",1]
["negative regulation of cellular response to transforming growth factor beta stimulus",1]
["negative regulation of chlorophyll biosynthetic process",1]
["negative regulation of chromatin organization",5]
["negative regulation of chromatin silencing",4]
["negative regulation of chromatin silencing at telomere",1]
["negative regulation of chromosome organization",13]
["negative regulation of chromosome segregation",4]
["negative regulation of chromosome separation",4]
["negative regulation of cysteine-type endopeptidase activity",1]
["negative regulation of cytokine production",2]
["negative regulation of cytokinesis",1]
["negative regulation of cytokinin dehydrogenase activity",1]
["negative regulation of cytoskeleton organization",2]
["negative regulation of defense response",15]
["negative regulation of defense response to bacterium",4]
["negative regulation of dendrite development",1]
["negative regulation of dendritic spine development",1]
["negative regulation of dephosphorylation",4]
["negative regulation of developmental growth",2]
["negative regulation of developmental process",21]
["negative regulation of division septum assembly",1]
["negative regulation of DNA binding",2]
["negative regulation of DNA biosynthetic process",4]
["negative regulation of DNA endoreduplication",5]
["negative regulation of DNA metabolic process",17]
["negative regulation of DNA recombination",4]
["negative regulation of DNA repair",1]
["negative regulation of DNA replication",9]
["negative regulation of DNA-binding transcription factor activity",1]
["negative regulation of DNA-dependent DNA replication",9]
["negative regulation of DNA-dependent DNA replication initiation",1]
["negative regulation of DNA-templated transcription- termination",1]
["negative regulation of double-strand break repair",1]
["negative regulation of double-strand break repair via single-strand annealing",1]
["negative regulation of embryonic development",1]
["negative regulation of endopeptidase activity",2]
["negative regulation of endoplasmic reticulum unfolded protein response",1]
["negative regulation of endosome organization",1]
["negative regulation of epidermal growth factor receptor signaling pathway",1]
["negative regulation of epithelial cell proliferation",1]
["negative regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["negative regulation of ERAD pathway",2]
["negative regulation of ERBB signaling pathway",1]
["negative regulation of ERK1 and ERK2 cascade",2]
["negative regulation of establishment of protein localization",1]
["negative regulation of ethylene biosynthetic process",3]
["negative regulation of ethylene-activated signaling pathway",6]
["negative regulation of exit from mitosis",1]
["negative regulation of exocytosis",1]
["negative regulation of exosomal secretion",1]
["negative regulation of extrinsic apoptotic signaling pathway",1]
["negative regulation of fertilization",1]
["negative regulation of floral organ abscission",1]
["negative regulation of flower development",7]
["negative regulation of G1/S transition of mitotic cell cycle",2]
["negative regulation of G2/M transition of mitotic cell cycle",3]
["negative regulation of gene expression",65]
["negative regulation of gene expression- epigenetic",7]
["negative regulation of gene silencing",7]
["negative regulation of gene silencing by miRNA",1]
["negative regulation of gene silencing by RNA",1]
["negative regulation of gibberellic acid mediated signaling pathway",1]
["negative regulation of glycolytic process",1]
["negative regulation of growth",5]
["negative regulation of GTPase activity",3]
["negative regulation of heart growth",1]
["negative regulation of hemopoiesis",1]
["negative regulation of hippo signaling",1]
["negative regulation of histone acetylation",1]
["negative regulation of histone modification",1]
["negative regulation of hormone biosynthetic process",3]
["negative regulation of hormone metabolic process",3]
["negative regulation of hydrolase activity",9]
["negative regulation of I-kappaB kinase/NF-kappaB signaling",1]
["negative regulation of immune effector process",1]
["negative regulation of immune response",5]
["negative regulation of immune system process",5]
["negative regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["negative regulation of inflammatory response",1]
["negative regulation of innate immune response",3]
["negative regulation of insulin receptor signaling pathway",1]
["negative regulation of interleukin-8 production",2]
["negative regulation of intracellular estrogen receptor signaling pathway",1]
["negative regulation of intracellular signal transduction",15]
["negative regulation of intracellular steroid hormone receptor signaling pathway",1]
["negative regulation of intralumenal vesicle formation",1]
["negative regulation of intrinsic apoptotic signaling pathway",1]
["negative regulation of ion transmembrane transport",1]
["negative regulation of ion transmembrane transporter activity",1]
["negative regulation of ion transport",1]
["negative regulation of isoprenoid metabolic process",1]
["negative regulation of JNK cascade",1]
["negative regulation of kinase activity",4]
["negative regulation of lateral root development",1]
["negative regulation of leaf development",1]
["negative regulation of leaf senescence",1]
["negative regulation of leukocyte activation",1]
["negative regulation of leukocyte differentiation",1]
["negative regulation of leukocyte proliferation",1]
["negative regulation of lipid biosynthetic process",1]
["negative regulation of lipid localization",1]
["negative regulation of lipid metabolic process",1]
["negative regulation of lipid storage",1]
["negative regulation of long-day photoperiodism- flowering",1]
["negative regulation of macromolecule biosynthetic process",47]
["negative regulation of macromolecule metabolic process",99]
["negative regulation of MAP kinase activity",3]
["negative regulation of MAPK cascade",4]
["negative regulation of mast cell activation",1]
["negative regulation of mast cell activation involved in immune response",1]
["negative regulation of mast cell proliferation",1]
["negative regulation of meiosis I",2]
["negative regulation of meiotic cell cycle",4]
["negative regulation of meiotic cell cycle phase transition",1]
["negative regulation of meiotic chromosome separation",1]
["negative regulation of meiotic nuclear division",4]
["negative regulation of mesoderm development",1]
["negative regulation of metabolic process",112]
["negative regulation of metaphase/anaphase transition of cell cycle",4]
["negative regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["negative regulation of MHC class II biosynthetic process",2]
["negative regulation of mitotic cell cycle",14]
["negative regulation of mitotic cell cycle DNA replication",1]
["negative regulation of mitotic cell cycle phase transition",9]
["negative regulation of mitotic cytokinesis",1]
["negative regulation of mitotic cytokinetic process",1]
["negative regulation of mitotic metaphase/anaphase transition",4]
["negative regulation of mitotic nuclear division",6]
["negative regulation of mitotic sister chromatid segregation",4]
["negative regulation of mitotic sister chromatid separation",4]
["negative regulation of molecular function",19]
["negative regulation of mRNA catabolic process",2]
["negative regulation of mRNA metabolic process",2]
["negative regulation of multi-organism process",6]
["negative regulation of multicellular organism growth",1]
["negative regulation of multicellular organismal process",21]
["negative regulation of muscle cell apoptotic process",1]
["negative regulation of muscle organ development",1]
["negative regulation of muscle tissue development",1]
["negative regulation of myeloid cell differentiation",1]
["negative regulation of myeloid leukocyte differentiation",1]
["negative regulation of nervous system development",1]
["negative regulation of neurogenesis",1]
["negative regulation of neuron apoptotic process",1]
["negative regulation of neuron death",1]
["negative regulation of neuron differentiation",1]
["negative regulation of neuron projection development",1]
["negative regulation of nitrogen compound metabolic process",72]
["negative regulation of nodal signaling pathway",1]
["negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["negative regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["negative regulation of non-canonical Wnt signaling pathway",1]
["negative regulation of nuclear cell cycle DNA replication",1]
["negative regulation of nuclear division",9]
["negative regulation of nucleic acid-templated transcription",27]
["negative regulation of nucleobase-containing compound metabolic process",48]
["negative regulation of nucleotide biosynthetic process",1]
["negative regulation of nucleotide catabolic process",1]
["negative regulation of nucleotide metabolic process",1]
["negative regulation of olefin biosynthetic process",3]
["negative regulation of olefin metabolic process",3]
["negative regulation of organ growth",1]
["negative regulation of organelle organization",21]
["negative regulation of osteoclast development",1]
["negative regulation of osteoclast differentiation",1]
["negative regulation of oxidoreductase activity",1]
["negative regulation of peptidase activity",2]
["negative regulation of peptide secretion",1]
["negative regulation of peptidyl-lysine acetylation",2]
["negative regulation of peptidyl-serine phosphorylation",1]
["negative regulation of peptidyl-serine phosphorylation of STAT protein",1]
["negative regulation of phosphatase activity",4]
["negative regulation of phosphate metabolic process",11]
["negative regulation of phosphoprotein phosphatase activity",3]
["negative regulation of phosphorelay signal transduction system",6]
["negative regulation of phosphorus metabolic process",11]
["negative regulation of phosphorylation",7]
["negative regulation of photomorphogenesis",2]
["negative regulation of photosynthesis",4]
["negative regulation of photosynthesis- light reaction",4]
["negative regulation of plant-type hypersensitive response",1]
["negative regulation of post-embryonic development",14]
["negative regulation of posttranscriptional gene silencing",3]
["negative regulation of potassium ion transmembrane transport",1]
["negative regulation of potassium ion transmembrane transporter activity",1]
["negative regulation of potassium ion transport",1]
["negative regulation of pri-miRNA transcription by RNA polymerase II",1]
["negative regulation of production of miRNAs involved in gene silencing by miRNA",1]
["negative regulation of programmed cell death",11]
["negative regulation of proteasomal protein catabolic process",2]
["negative regulation of proteasomal ubiquitin-dependent protein catabolic process",2]
["negative regulation of protein acetylation",2]
["negative regulation of protein catabolic process",3]
["negative regulation of protein dephosphorylation",3]
["negative regulation of protein depolymerization",1]
["negative regulation of protein K63-linked ubiquitination",1]
["negative regulation of protein kinase activity",4]
["negative regulation of protein metabolic process",23]
["negative regulation of protein modification by small protein conjugation or removal",1]
["negative regulation of protein modification process",12]
["negative regulation of protein phosphorylation",6]
["negative regulation of protein polymerization",3]
["negative regulation of protein polyubiquitination",1]
["negative regulation of protein secretion",1]
["negative regulation of protein serine/threonine kinase activity",4]
["negative regulation of protein transport",1]
["negative regulation of protein ubiquitination",1]
["negative regulation of protein-containing complex assembly",3]
["negative regulation of protein-containing complex disassembly",2]
["negative regulation of proteolysis",4]
["negative regulation of proteolysis involved in cellular protein catabolic process",2]
["negative regulation of purine nucleotide biosynthetic process",1]
["negative regulation of purine nucleotide metabolic process",1]
["negative regulation of Ras protein signal transduction",2]
["negative regulation of reciprocal meiotic recombination",2]
["negative regulation of reproductive process",13]
["negative regulation of response to alcohol",8]
["negative regulation of response to biotic stimulus",4]
["negative regulation of response to DNA damage stimulus",1]
["negative regulation of response to endoplasmic reticulum stress",3]
["negative regulation of response to external stimulus",5]
["negative regulation of response to stimulus",59]
["negative regulation of RNA biosynthetic process",27]
["negative regulation of RNA catabolic process",3]
["negative regulation of RNA metabolic process",30]
["negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["negative regulation of secondary metabolite biosynthetic process",1]
["negative regulation of secretion",2]
["negative regulation of secretion by cell",2]
["negative regulation of seed germination",3]
["negative regulation of septation initiation signaling",1]
["negative regulation of sequestering of triglyceride",1]
["negative regulation of short-day photoperiodism- flowering",1]
["negative regulation of signal transduction",39]
["negative regulation of signaling",41]
["negative regulation of sinapate ester biosynthetic process",1]
["negative regulation of sister chromatid segregation",4]
["negative regulation of small GTPase mediated signal transduction",2]
["negative regulation of small molecule metabolic process",5]
["negative regulation of stress-activated MAPK cascade",1]
["negative regulation of stress-activated protein kinase signaling cascade",1]
["negative regulation of striated muscle cell apoptotic process",1]
["negative regulation of striated muscle tissue development",1]
["negative regulation of sulfur amino acid metabolic process",3]
["negative regulation of sulfur metabolic process",3]
["negative regulation of supramolecular fiber organization",2]
["negative regulation of synaptic transmission",2]
["negative regulation of synaptic transmission- glutamatergic",2]
["negative regulation of systemic acquired resistance",1]
["negative regulation of telomerase activity",1]
["negative regulation of telomere maintenance",4]
["negative regulation of telomere maintenance via telomerase",4]
["negative regulation of telomere maintenance via telomere lengthening",4]
["negative regulation of tetrapyrrole biosynthetic process",1]
["negative regulation of tetrapyrrole metabolic process",1]
["negative regulation of transcription by RNA polymerase II",6]
["negative regulation of transcription regulatory region DNA binding",1]
["negative regulation of transcription- DNA-templated",24]
["negative regulation of transferase activity",5]
["negative regulation of transforming growth factor beta receptor signaling pathway",1]
["negative regulation of translation",6]
["negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",3]
["negative regulation of transmembrane transport",1]
["negative regulation of transport",3]
["negative regulation of transporter activity",1]
["negative regulation of ubiquitin-dependent protein catabolic process",2]
["negative regulation of vacuole fusion- non-autophagic",1]
["negative regulation of Wnt signaling pathway",4]
["nematode larval development",3]
["nervous system development",22]
["nervous system process",6]
["neural precursor cell proliferation",2]
["neural tube development",2]
["neural tube formation",1]
["neuroblast division",1]
["neuroblast proliferation",1]
["neurogenesis",16]
["neuromuscular junction development",1]
["neuromuscular process",1]
["neuron apoptotic process",1]
["neuron death",1]
["neuron development",6]
["neuron differentiation",9]
["neuron projection",5]
["neuron projection development",5]
["neuron projection guidance",1]
["neuron projection morphogenesis",2]
["neuron projection terminus",1]
["neuron spine",1]
["neuronal cell body",4]
["neuronal stem cell division",1]
["neurotransmitter binding",1]
["neurotransmitter biosynthetic process",5]
["neurotransmitter catabolic process",3]
["neurotransmitter metabolic process",8]
["neurotransmitter secretion",2]
["neurotransmitter transmembrane transporter activity",2]
["neurotransmitter transport",4]
["neutral amino acid transmembrane transporter activity",2]
["neutral amino acid transport",3]
["neutral lipid biosynthetic process",4]
["neutral lipid catabolic process",3]
["neutral lipid metabolic process",7]
["neutrophil activation",3]
["neutrophil activation involved in immune response",3]
["neutrophil degranulation",3]
["neutrophil mediated immunity",3]
["NF-kappaB binding",2]
["nickel cation binding",1]
["nicotinamidase activity",1]
["nicotinamide metabolic process",1]
["nicotinamide nucleotide biosynthetic process",13]
["nicotinamide nucleotide biosynthetic process from aspartate",1]
["nicotinamide nucleotide metabolic process",22]
["nicotinamide-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide diphosphorylase (carboxylating) activity",1]
["nitrate assimilation",1]
["nitrate metabolic process",1]
["nitrate reductase (NADH) activity",1]
["nitrate reductase activity",2]
["nitrate transmembrane transporter activity",1]
["nitrate transport",2]
["nitric oxide biosynthetic process",2]
["nitric oxide mediated signal transduction",1]
["nitric oxide metabolic process",2]
["nitrile biosynthetic process",1]
["nitrile metabolic process",1]
["nitrite reductase (NO-forming) activity",1]
["nitrite reductase activity",1]
["nitrite transport",1]
["nitrogen compound metabolic process",920]
["nitrogen compound transport",138]
["nitrogen cycle metabolic process",3]
["nitrogen utilization",2]
["NLS-bearing protein import into nucleus",6]
["NMS complex",1]
["Noc complex",1]
["Noc1p-Noc2p complex",1]
["Noc2p-Noc3p complex",1]
["nodulation",4]
["non-canonical Wnt signaling pathway",1]
["non-membrane-bounded organelle",280]
["non-motile cilium",1]
["non-motile cilium assembly",1]
["non-photoreactive DNA repair",2]
["non-reproductive fruiting body development",5]
["nonfunctional rRNA decay",2]
["nonphotochemical quenching",1]
["Notch signaling pathway",2]
["npBAF complex",1]
["nuclear body",33]
["nuclear cap binding complex",2]
["nuclear cell cycle DNA replication initiation",1]
["nuclear chromosome",47]
["nuclear chromosome segregation",34]
["nuclear dicing body",1]
["nuclear division",49]
["nuclear DNA replication",5]
["nuclear DNA-directed RNA polymerase complex",16]
["nuclear envelope",37]
["nuclear envelope organization",5]
["nuclear exosome (RNase complex)",5]
["nuclear export",22]
["nuclear export signal receptor activity",4]
["nuclear import signal receptor activity",1]
["nuclear lamina",2]
["nuclear localization sequence binding",5]
["nuclear lumen",258]
["nuclear matrix",7]
["nuclear membrane",13]
["nuclear membrane fusion",1]
["nuclear membrane reassembly",4]
["nuclear migration",1]
["nuclear migration along microfilament",1]
["nuclear mRNA surveillance",7]
["nuclear mRNA surveillance of mRNA 3'-end processing",1]
["nuclear mRNA surveillance of spliceosomal pre-mRNA splicing",2]
["nuclear ncRNA surveillance",5]
["nuclear origin of replication recognition complex",4]
["nuclear outer membrane-endoplasmic reticulum membrane network",74]
["nuclear periphery",14]
["nuclear polyadenylation-dependent mRNA catabolic process",2]
["nuclear polyadenylation-dependent ncRNA catabolic process",5]
["nuclear polyadenylation-dependent rRNA catabolic process",5]
["nuclear polyadenylation-dependent tRNA catabolic process",3]
["nuclear pore",11]
["nuclear pore central transport channel",2]
["nuclear pore cytoplasmic filaments",1]
["nuclear pore inner ring",1]
["nuclear pore localization",2]
["nuclear pore organization",2]
["nuclear pore outer ring",2]
["nuclear pre-replicative complex",3]
["nuclear proteasome complex",2]
["nuclear receptor binding",5]
["nuclear replication fork",8]
["nuclear replisome",3]
["nuclear retention of pre-mRNA at the site of transcription",4]
["nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription",1]
["nuclear retention of unspliced pre-mRNA at the site of transcription",2]
["nuclear RNA surveillance",7]
["nuclear speck",20]
["nuclear telomere cap complex",1]
["nuclear transport",35]
["nuclear ubiquitin ligase complex",4]
["nuclear-transcribed mRNA catabolic process",24]
["nuclear-transcribed mRNA catabolic process- 3'-5' exonucleolytic nonsense-mediated decay",2]
["nuclear-transcribed mRNA catabolic process- deadenylation-dependent decay",12]
["nuclear-transcribed mRNA catabolic process- deadenylation-independent decay",2]
["nuclear-transcribed mRNA catabolic process- exonucleolytic",8]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 3'-5'",5]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 5'-3'",1]
["nuclear-transcribed mRNA catabolic process- no-go decay",1]
["nuclear-transcribed mRNA catabolic process- non-stop decay",2]
["nuclear-transcribed mRNA catabolic process- nonsense-mediated decay",6]
["nuclear-transcribed mRNA poly(A) tail shortening",1]
["nuclease activity",47]
["nucleic acid binding",228]
["nucleic acid metabolic process",344]
["nucleic acid phosphodiester bond hydrolysis",69]
["nucleic acid transport",21]
["nucleic acid-templated transcription",32]
["nucleobase biosynthetic process",4]
["nucleobase catabolic process",7]
["nucleobase metabolic process",16]
["nucleobase transmembrane transporter activity",2]
["nucleobase transport",2]
["nucleobase-containing compound biosynthetic process",98]
["nucleobase-containing compound catabolic process",49]
["nucleobase-containing compound kinase activity",11]
["nucleobase-containing compound metabolic process",424]
["nucleobase-containing compound transmembrane transporter activity",14]
["nucleobase-containing compound transport",37]
["nucleobase-containing small molecule biosynthetic process",21]
["nucleobase-containing small molecule catabolic process",3]
["nucleobase-containing small molecule metabolic process",86]
["nucleocytoplasmic carrier activity",5]
["nucleocytoplasmic transport",35]
["nucleocytoplasmic transport complex",1]
["nucleoid",13]
["nucleoid DNA packaging",1]
["nucleolar chromatin",1]
["nucleolar ribonuclease P complex",1]
["nucleologenesis",1]
["nucleolus",108]
["nucleolus organization",2]
["nucleoplasm",130]
["nucleoside binding",15]
["nucleoside biosynthetic process",8]
["nucleoside bisphosphate biosynthetic process",4]
["nucleoside bisphosphate catabolic process",1]
["nucleoside bisphosphate metabolic process",9]
["nucleoside catabolic process",1]
["nucleoside diphosphate biosynthetic process",1]
["nucleoside diphosphate metabolic process",10]
["nucleoside diphosphate phosphorylation",9]
["nucleoside kinase activity",5]
["nucleoside metabolic process",14]
["nucleoside monophosphate biosynthetic process",18]
["nucleoside monophosphate kinase activity",4]
["nucleoside monophosphate metabolic process",29]
["nucleoside monophosphate phosphorylation",4]
["nucleoside phosphate binding",75]
["nucleoside phosphate biosynthetic process",40]
["nucleoside phosphate catabolic process",13]
["nucleoside phosphate metabolic process",64]
["nucleoside salvage",4]
["nucleoside transport",1]
["nucleoside triphosphate biosynthetic process",12]
["nucleoside triphosphate catabolic process",1]
["nucleoside triphosphate metabolic process",20]
["nucleoside-diphosphatase activity",4]
["nucleoside-triphosphatase activity",136]
["nucleoside-triphosphatase regulator activity",15]
["nucleoside-triphosphate diphosphatase activity",1]
["nucleosomal DNA binding",2]
["nucleosomal histone binding",1]
["nucleosome assembly",5]
["nucleosome binding",4]
["nucleosome disassembly",2]
["nucleosome mobilization",1]
["nucleosome organization",10]
["nucleosome positioning",1]
["nucleotidase activity",2]
["nucleotide binding",75]
["nucleotide biosynthetic process",40]
["nucleotide catabolic process",12]
["nucleotide diphosphatase activity",1]
["nucleotide metabolic process",64]
["nucleotide phosphorylation",10]
["nucleotide salvage",1]
["nucleotide transmembrane transport",8]
["nucleotide transmembrane transporter activity",8]
["nucleotide transport",9]
["nucleotide-excision repair",18]
["nucleotide-excision repair complex",5]
["nucleotide-excision repair factor 1 complex",2]
["nucleotide-excision repair factor 2 complex",1]
["nucleotide-excision repair involved in interstrand cross-link repair",1]
["nucleotide-excision repair- DNA damage recognition",4]
["nucleotide-excision repair- DNA gap filling",3]
["nucleotide-excision repair- DNA incision",6]
["nucleotide-excision repair- DNA incision- 5'-to lesion",5]
["nucleotide-excision repair- preincision complex assembly",4]
["nucleotide-excision repair- preincision complex stabilization",1]
["nucleotide-sugar biosynthetic process",5]
["nucleotide-sugar metabolic process",7]
["nucleotide-sugar transmembrane transport",10]
["nucleotide-sugar transmembrane transporter activity",7]
["nucleotidyltransferase activity",24]
["nucleus",570]
["nucleus localization",1]
["nucleus organization",18]
["NuRD complex",2]
["nurse cell apoptotic process",1]
["O-acetyltransferase activity",5]
["O-acyltransferase activity",11]
["O-methyltransferase activity",4]
["obsolete antibiotic transmembrane transporter activity",1]
["obsolete antibiotic transport",4]
["obsolete ATPase-coupled amide-transporter activity",2]
["obsolete axon part",2]
["obsolete axoneme part",3]
["obsolete cell",1855]
["obsolete cell cortex part",8]
["obsolete cell division site part",3]
["obsolete cell part",1855]
["obsolete cell projection part",15]
["obsolete cell septum part",1]
["obsolete cell wall part",3]
["obsolete cellular process regulating host cell cycle in response to virus",1]
["obsolete chloroplast part",303]
["obsolete chromosomal part",73]
["obsolete ciliary part",7]
["obsolete coenzyme binding",29]
["obsolete coenzyme biosynthetic process",39]
["obsolete coenzyme catabolic process",3]
["obsolete coenzyme metabolic process",61]
["obsolete coenzyme transmembrane transporter activity",2]
["obsolete coenzyme transport",2]
["obsolete cofactor binding",41]
["obsolete cofactor biosynthetic process",58]
["obsolete cofactor catabolic process",14]
["obsolete cofactor metabolic process",101]
["obsolete cofactor transmembrane transporter activity",3]
["obsolete cofactor transport",9]
["obsolete contractile fiber part",1]
["obsolete cytoplasmic part",1293]
["obsolete cytoplasmic vesicle part",42]
["obsolete cytoskeletal part",52]
["obsolete cytosolic part",30]
["obsolete DNA strand renaturation",1]
["obsolete endoplasmic reticulum part",82]
["obsolete endosomal part",28]
["obsolete external encapsulating structure part",3]
["obsolete extracellular region part",12]
["obsolete Golgi apparatus part",82]
["obsolete intracellular organelle part",962]
["obsolete intracellular part",1752]
["obsolete membrane part",233]
["obsolete microbody part",10]
["obsolete microtubule organizing center part",6]
["obsolete mitochondrial membrane part",21]
["obsolete mitochondrial part",75]
["obsolete modulation of growth of symbiont involved in interaction with host",1]
["obsolete movement in environment of other organism involved in symbiotic interaction",2]
["obsolete movement in other organism involved in symbiotic interaction",1]
["obsolete multi organism cell adhesion",1]
["obsolete multi-organism intracellular transport",1]
["obsolete negative regulation of chromatin silencing involved in replicative cell aging",1]
["obsolete negative regulation of coenzyme metabolic process",1]
["obsolete negative regulation of cofactor metabolic process",2]
["obsolete negative regulation of growth of symbiont in host",1]
["obsolete negative regulation of growth of symbiont involved in interaction with host",1]
["obsolete neuron part",8]
["obsolete non-recombinational repair",7]
["obsolete nuclear chromosome part",43]
["obsolete nuclear part",313]
["obsolete nuclear telomeric heterochromatin",1]
["obsolete nucleolar part",13]
["obsolete nucleoplasm part",72]
["obsolete organelle part",963]
["obsolete other organism",1]
["obsolete other organism cell",1]
["obsolete oxidation-reduction process",187]
["obsolete oxidoreductase activity- acting on diphenols and related substances as donors- cytochrome as acceptor",1]
["obsolete oxidoreduction coenzyme metabolic process",27]
["obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction",1]
["obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response",1]
["obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction",3]
["obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response",3]
["obsolete pathogenesis",1]
["obsolete pattern binding",5]
["obsolete peroxisomal part",10]
["obsolete plasma membrane bounded cell projection part",15]
["obsolete plasma membrane part",44]
["obsolete plastid part",309]
["obsolete positive regulation of cofactor metabolic process",1]
["obsolete positive regulation of protein import into nucleus- translocation",1]
["obsolete positive regulation of receptor biosynthetic process",1]
["obsolete progressive alteration of chromatin involved in replicative cell aging",1]
["obsolete protein import into nucleus- translocation",3]
["obsolete protein transporter activity",18]
["obsolete protein-cofactor linkage",3]
["obsolete purine NTP-dependent helicase activity",38]
["obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of coenzyme metabolic process",3]
["obsolete regulation of cofactor metabolic process",10]
["obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of growth of symbiont in host",1]
["obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of protein import into nucleus- translocation",1]
["obsolete regulation of receptor biosynthetic process",2]
["obsolete regulation of transcription involved in cell fate commitment",1]
["obsolete replicative cell aging",1]
["obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly",1]
["obsolete RNA polymerase II transcription regulator recruiting activity",2]
["obsolete sperm part",1]
["obsolete synapse part",6]
["obsolete telomeric heterochromatin",1]
["obsolete thylakoid part",78]
["obsolete transcription factor activity- core RNA polymerase binding",4]
["obsolete transcription factor activity- core RNA polymerase II binding",2]
["obsolete transcription factor activity- protein binding",7]
["obsolete transcription factor activity- RNA polymerase II transcription factor binding",3]
["obsolete transcription factor activity- transcription factor binding",3]
["obsolete transcription regulator recruiting activity",2]
["obsolete vacuolar part",107]
["odontogenesis",1]
["odontogenesis of dentin-containing tooth",1]
["olefin biosynthetic process",1]
["olefin metabolic process",1]
["oligodendrocyte development",2]
["oligodendrocyte differentiation",2]
["oligopeptide binding",1]
["oligopeptide transmembrane transport",1]
["oligopeptide transport",2]
["oligosaccharide biosynthetic process",5]
["oligosaccharide catabolic process",6]
["oligosaccharide metabolic process",15]
["oligosaccharide transmembrane transporter activity",2]
["oligosaccharide transport",3]
["oligosaccharide-lipid intermediate biosynthetic process",8]
["oligosaccharyl transferase activity",3]
["oligosaccharyltransferase complex",5]
["omega peptidase activity",1]
["omega-6 fatty acid desaturase activity",1]
["one-carbon compound transport",2]
["one-carbon metabolic process",4]
["oocyte development",2]
["oocyte differentiation",2]
["oocyte growth",1]
["oogenesis",4]
["open tracheal system development",1]
["organ boundary specification between lateral organs and the meristem",1]
["organ growth",1]
["organellar large ribosomal subunit",2]
["organellar ribosome",4]
["organellar small ribosomal subunit",1]
["organelle",1521]
["organelle assembly",51]
["organelle disassembly",13]
["organelle envelope",245]
["organelle envelope lumen",1]
["organelle fission",62]
["organelle fusion",13]
["organelle inheritance",1]
["organelle inner membrane",62]
["organelle localization",25]
["organelle localization by membrane tethering",6]
["organelle lumen",300]
["organelle membrane",249]
["organelle membrane contact site",3]
["organelle membrane fusion",10]
["organelle organization",332]
["organelle outer membrane",23]
["organelle subcompartment",225]
["organelle transport along microtubule",3]
["organic acid binding",9]
["organic acid biosynthetic process",82]
["organic acid catabolic process",32]
["organic acid metabolic process",176]
["organic acid transmembrane transport",29]
["organic acid transmembrane transporter activity",29]
["organic acid transport",32]
["organic anion transmembrane transporter activity",42]
["organic anion transport",50]
["organic cation transmembrane transporter activity",4]
["organic cation transport",6]
["organic cyclic compound binding",312]
["organic cyclic compound biosynthetic process",175]
["organic cyclic compound catabolic process",70]
["organic cyclic compound metabolic process",515]
["organic heteropentacyclic compound biosynthetic process",1]
["organic heteropentacyclic compound metabolic process",1]
["organic hydroxy compound biosynthetic process",35]
["organic hydroxy compound catabolic process",9]
["organic hydroxy compound metabolic process",51]
["organic hydroxy compound transmembrane transporter activity",4]
["organic hydroxy compound transport",6]
["organic substance biosynthetic process",458]
["organic substance catabolic process",219]
["organic substance metabolic process",1112]
["organic substance transport",173]
["organonitrogen compound biosynthetic process",235]
["organonitrogen compound catabolic process",118]
["organonitrogen compound metabolic process",616]
["organophosphate biosynthetic process",76]
["organophosphate catabolic process",20]
["organophosphate ester transmembrane transporter activity",8]
["organophosphate ester transport",11]
["organophosphate metabolic process",117]
["origin recognition complex",4]
["ornithine biosynthetic process",1]
["ornithine metabolic process",3]
["ornithine transport",1]
["ossification",2]
["osteoblast differentiation",1]
["osteoblast proliferation",1]
["other organism part",1]
["otic vesicle development",1]
["otic vesicle morphogenesis",1]
["outer acrosomal membrane",1]
["outer membrane",23]
["outer membrane-bounded periplasmic space",1]
["outer mitochondrial membrane protein complex",1]
["ovarian follicle cell development",1]
["ovarian follicle cell migration",1]
["ovarian follicle development",1]
["oxaloacetate metabolic process",1]
["oxaloacetate transmembrane transporter activity",2]
["oxaloacetate transport",2]
["oxaloacetate(2-) transmembrane transport",2]
["oxazole or thiazole biosynthetic process",1]
["oxazole or thiazole metabolic process",1]
["oxidative demethylation",1]
["oxidative DNA demethylation",1]
["oxidative phosphorylation",3]
["oxidative photosynthetic carbon pathway",2]
["oxidative single-stranded DNA demethylation",1]
["oxidized base lesion DNA N-glycosylase activity",1]
["oxidized DNA binding",1]
["oxidized purine DNA binding",1]
["oxidized purine nucleobase lesion DNA N-glycosylase activity",1]
["oxidoreductase activity",153]
["oxidoreductase activity- acting on a sulfur group of donors",10]
["oxidoreductase activity- acting on a sulfur group of donors- disulfide as acceptor",2]
["oxidoreductase activity- acting on a sulfur group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- NAD(P) as acceptor",5]
["oxidoreductase activity- acting on a sulfur group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on CH or CH2 groups",1]
["oxidoreductase activity- acting on CH or CH2 groups- with an iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on CH-OH group of donors",30]
["oxidoreductase activity- acting on diphenols and related substances as donors",4]
["oxidoreductase activity- acting on diphenols and related substances as donors- oxygen as acceptor",3]
["oxidoreductase activity- acting on iron-sulfur proteins as donors",2]
["oxidoreductase activity- acting on iron-sulfur proteins as donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions",8]
["oxidoreductase activity- acting on metal ions- flavin as acceptor",1]
["oxidoreductase activity- acting on metal ions- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions- oxygen as acceptor",1]
["oxidoreductase activity- acting on NAD(P)H",19]
["oxidoreductase activity- acting on NAD(P)H- heme protein as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- NAD(P) as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- quinone or similar compound as acceptor",5]
["oxidoreductase activity- acting on other nitrogenous compounds as donors",4]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- with NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen",22]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- NAD(P)H as one donor- and incorporation of one atom of oxygen",13]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- reduced iron-sulfur protein as one donor- and incorporation of one atom of oxygen",1]
["oxidoreductase activity- acting on paired donors- with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water",2]
["oxidoreductase activity- acting on peroxide as acceptor",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)",1]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of two atoms of oxygen",4]
["oxidoreductase activity- acting on superoxide radicals as acceptor",1]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors",7]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors- NAD or NADP as acceptor",7]
["oxidoreductase activity- acting on the CH-CH group of donors",18]
["oxidoreductase activity- acting on the CH-CH group of donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- NAD or NADP as acceptor",5]
["oxidoreductase activity- acting on the CH-CH group of donors- oxygen as acceptor",4]
["oxidoreductase activity- acting on the CH-CH group of donors- quinone or related compound as acceptor",2]
["oxidoreductase activity- acting on the CH-NH group of donors",8]
["oxidoreductase activity- acting on the CH-NH group of donors- NAD or NADP as acceptor",5]
["oxidoreductase activity- acting on the CH-NH group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-NH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors",2]
["oxidoreductase activity- acting on the CH-NH2 group of donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-OH group of donors- cytochrome as acceptor",2]
["oxidoreductase activity- acting on the CH-OH group of donors- NAD or NADP as acceptor",27]
["oxidoreductase activity- acting on the CH-OH group of donors- oxygen as acceptor",2]
["oxidoreductase activity- acting on the CH-OH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase complex",11]
["oxo-acid-lyase activity",2]
["oxoacid metabolic process",176]
["oxoglutarate:malate antiporter activity",1]
["oxygen-dependent protoporphyrinogen oxidase activity",1]
["P granule",1]
["P-body",11]
["P-body assembly",2]
["p-coumarate 3-hydroxylase activity",1]
["p-coumaryl alcohol transport",1]
["P-P-bond-hydrolysis-driven protein transmembrane transporter activity",6]
["P-type ion transporter activity",1]
["P-type proton-exporting transporter activity",4]
["P4 peroxisome",1]
["palisade mesophyll development",1]
["pallium development",2]
["palmitoyl hydrolase activity",1]
["palmitoyl-(protein) hydrolase activity",1]
["palmitoyltransferase activity",1]
["palmitoyltransferase complex",2]
["PAM complex- Tim23 associated import motor",1]
["pancreas development",1]
["pantothenate biosynthetic process",1]
["pantothenate metabolic process",1]
["para-aminobenzoic acid biosynthetic process",1]
["para-aminobenzoic acid metabolic process",1]
["paraspeckles",1]
["Parkin-FBXW7-Cul1 ubiquitin ligase complex",1]
["passive transmembrane transporter activity",19]
["pattern recognition receptor signaling pathway",2]
["pattern specification process",30]
["PcG protein complex",1]
["PDZ domain binding",1]
["PeBoW complex",3]
["pectic galactan metabolic process",1]
["pectin biosynthetic process",6]
["pectin catabolic process",1]
["pectin metabolic process",10]
["pectinesterase activity",2]
["pectinesterase inhibitor activity",1]
["pectoral fin development",2]
["pectoral fin morphogenesis",2]
["pentose biosynthetic process",1]
["pentose catabolic process",2]
["pentose metabolic process",5]
["pentose-phosphate shunt",4]
["pentose-phosphate shunt- non-oxidative branch",2]
["pentose-phosphate shunt- oxidative branch",2]
["pentosyltransferase activity",11]
["peptidase activator activity",2]
["peptidase activity",105]
["peptidase complex",21]
["peptidase inhibitor activity",1]
["peptidase regulator activity",3]
["peptide binding",14]
["peptide biosynthetic process",60]
["peptide catabolic process",2]
["peptide deformylase activity",1]
["peptide metabolic process",68]
["peptide N-acetyltransferase activity",3]
["peptide receptor activity",1]
["peptide secretion",1]
["peptide transmembrane transporter activity",6]
["peptide transport",96]
["peptide-lysine-N-acetyltransferase activity",3]
["peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity",1]
["peptide-O-fucosyltransferase activity",1]
["peptidoglycan catabolic process",1]
["peptidoglycan metabolic process",1]
["peptidoglycan-based cell wall",1]
["peptidoglycan-based cell wall biogenesis",1]
["peptidyl-amino acid modification",84]
["peptidyl-arginine methylation",7]
["peptidyl-arginine methylation- to asymmetrical-dimethyl arginine",4]
["peptidyl-arginine methylation- to symmetrical-dimethyl arginine",1]
["peptidyl-arginine modification",7]
["peptidyl-arginine N-methylation",6]
["peptidyl-arginine omega-N-methylation",5]
["peptidyl-asparagine modification",8]
["peptidyl-diphthamide biosynthetic process from peptidyl-histidine",3]
["peptidyl-diphthamide metabolic process",3]
["peptidyl-glutamine modification",1]
["peptidyl-glycine modification",1]
["peptidyl-histidine modification",6]
["peptidyl-histidine phosphorylation",3]
["peptidyl-lysine acetylation",7]
["peptidyl-lysine dimethylation",1]
["peptidyl-lysine methylation",13]
["peptidyl-lysine modification",29]
["peptidyl-lysine modification to peptidyl-hypusine",2]
["peptidyl-lysine monomethylation",2]
["peptidyl-lysine trimethylation",5]
["peptidyl-methionine modification",1]
["peptidyl-proline 4-dioxygenase activity",1]
["peptidyl-proline dioxygenase activity",1]
["peptidyl-proline hydroxylation",1]
["peptidyl-proline hydroxylation to 4-hydroxy-L-proline",1]
["peptidyl-proline modification",21]
["peptidyl-prolyl cis-trans isomerase activity",17]
["peptidyl-pyroglutamic acid biosynthetic process- using glutaminyl-peptide cyclotransferase",1]
["peptidyl-serine dephosphorylation",1]
["peptidyl-serine modification",9]
["peptidyl-serine phosphorylation",9]
["peptidyl-threonine dephosphorylation",3]
["peptidyl-threonine modification",3]
["peptidyl-threonine phosphorylation",3]
["peptidyl-tyrosine dephosphorylation",6]
["peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity",1]
["peptidyl-tyrosine modification",2]
["peptidyl-tyrosine phosphorylation",2]
["perikaryon",1]
["perinuclear region of cytoplasm",14]
["peripheral nervous system development",2]
["periplasmic space",2]
["peroxidase activity",6]
["peroxiredoxin activity",1]
["peroxisomal membrane",10]
["peroxisomal membrane transport",3]
["peroxisomal transport",5]
["peroxisome",46]
["peroxisome fission",3]
["peroxisome matrix targeting signal-1 binding",1]
["peroxisome membrane targeting sequence binding",1]
["peroxisome organization",9]
["peroxisome targeting sequence binding",2]
["PET complex",1]
["petal development",1]
["petal vascular tissue pattern formation",1]
["pH reduction",4]
["phagocytic vesicle",3]
["phagocytic vesicle membrane",1]
["phagocytosis",3]
["phagolysosome assembly",2]
["phagolysosome assembly involved in apoptotic cell clearance",2]
["phagophore assembly site",7]
["phagophore assembly site membrane",4]
["phagosome acidification",2]
["phagosome acidification involved in apoptotic cell clearance",1]
["phagosome maturation",3]
["phagosome maturation involved in apoptotic cell clearance",2]
["phagosome-lysosome fusion",1]
["phenol-containing compound catabolic process",3]
["phenol-containing compound metabolic process",3]
["phenylalanine-tRNA ligase activity",1]
["phenylalanine-tRNA ligase complex",1]
["phenylalanyl-tRNA aminoacylation",2]
["phenylpropanoid biosynthetic process",9]
["phenylpropanoid metabolic process",11]
["pheophytinase activity",1]
["phloem development",1]
["phloem or xylem histogenesis",16]
["phloem sucrose loading",1]
["phloem transport",2]
["phosphatase activity",49]
["phosphatase binding",6]
["phosphatase complex",2]
["phosphatase inhibitor activity",4]
["phosphatase regulator activity",9]
["phosphate ion binding",1]
["phosphate ion homeostasis",2]
["phosphate ion transmembrane transport",5]
["phosphate ion transmembrane transporter activity",5]
["phosphate ion transport",7]
["phosphate-containing compound metabolic process",256]
["phosphatidate cytidylyltransferase activity",1]
["phosphatidate phosphatase activity",1]
["phosphatidic acid binding",3]
["phosphatidic acid biosynthetic process",1]
["phosphatidic acid metabolic process",2]
["phosphatidylcholine 12-monooxygenase activity",1]
["phosphatidylcholine biosynthetic process",2]
["phosphatidylcholine catabolic process",1]
["phosphatidylcholine metabolic process",3]
["phosphatidylcholine phospholipase C activity",1]
["phosphatidylethanolamine catabolic process",1]
["phosphatidylethanolamine metabolic process",1]
["phosphatidylglycerol biosynthetic process",2]
["phosphatidylglycerol metabolic process",4]
["phosphatidylinositol 3-kinase complex",1]
["phosphatidylinositol 3-kinase complex- class III",1]
["phosphatidylinositol 3-kinase complex- class III- type I",1]
["phosphatidylinositol 3-kinase complex- class III- type II",1]
["phosphatidylinositol 3-kinase signaling",1]
["phosphatidylinositol binding",10]
["phosphatidylinositol biosynthetic process",6]
["phosphatidylinositol bisphosphate binding",2]
["phosphatidylinositol bisphosphate phosphatase activity",2]
["phosphatidylinositol dephosphorylation",1]
["phosphatidylinositol kinase activity",1]
["phosphatidylinositol metabolic process",8]
["phosphatidylinositol N-acetylglucosaminyltransferase activity",1]
["phosphatidylinositol phosphate 5-phosphatase activity",2]
["phosphatidylinositol phosphate binding",3]
["phosphatidylinositol phosphate biosynthetic process",1]
["phosphatidylinositol phosphate phosphatase activity",2]
["phosphatidylinositol trisphosphate phosphatase activity",1]
["phosphatidylinositol-3-4-5-trisphosphate 5-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate 3-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate phosphatase activity",1]
["phosphatidylinositol-3-5-bisphosphate 5-phosphatase activity",1]
["phosphatidylinositol-3-5-bisphosphate binding",2]
["phosphatidylinositol-3-5-bisphosphate phosphatase activity",1]
["phosphatidylinositol-3-phosphate binding",2]
["phosphatidylinositol-3-phosphate biosynthetic process",1]
["phosphatidylinositol-5-phosphate binding",1]
["phosphatidylinositol-mediated signaling",1]
["phosphatidylserine biosynthetic process",2]
["phosphatidylserine metabolic process",2]
["phosphoadenylyl-sulfate reductase (thioredoxin) activity",1]
["phosphodiesterase I activity",1]
["phosphoenolpyruvate carboxykinase activity",2]
["phosphoenolpyruvate carboxylase activity",2]
["phosphoethanolamine N-methyltransferase activity",1]
["phosphofructokinase activity",3]
["phosphoglucomutase activity",2]
["phosphogluconate dehydrogenase (decarboxylating) activity",1]
["phosphoglycerate mutase activity",1]
["phospholipase A1 activity",1]
["phospholipase A2 activity",3]
["phospholipase activator activity",1]
["phospholipase activity",10]
["phospholipase C activity",1]
["phospholipase D activity",3]
["phospholipid binding",18]
["phospholipid biosynthetic process",28]
["phospholipid catabolic process",4]
["phospholipid dephosphorylation",1]
["phospholipid homeostasis",1]
["phospholipid metabolic process",39]
["phospholipid translocation",2]
["phospholipid transport",2]
["phospholipid transporter activity",1]
["phospholipid:diacylglycerol acyltransferase activity",1]
["phosphomethylethanolamine N-methyltransferase activity",1]
["phosphomethylpyrimidine kinase activity",1]
["phosphopantothenoylcysteine decarboxylase activity",1]
["phosphoprotein binding",3]
["phosphoprotein phosphatase activity",14]
["phosphopyruvate hydratase activity",1]
["phosphorelay response regulator activity",4]
["phosphorelay sensor kinase activity",1]
["phosphorelay signal transduction system",14]
["phosphoribosyl-AMP cyclohydrolase activity",1]
["phosphoribosyl-ATP diphosphatase activity",1]
["phosphoribosylaminoimidazolesuccinocarboxamide synthase activity",1]
["phosphoric diester hydrolase activity",6]
["phosphoric ester hydrolase activity",55]
["phosphorus metabolic process",263]
["phosphorylase kinase regulator activity",1]
["phosphorylated carbohydrate dephosphorylation",3]
["phosphorylation",127]
["phosphorylation of RNA polymerase II C-terminal domain",2]
["phosphoserine phosphatase activity",1]
["phosphoserine residue binding",1]
["phosphothreonine residue binding",1]
["phosphotransferase activity- alcohol group as acceptor",98]
["phosphotransferase activity- carboxyl group as acceptor",2]
["phosphotransferase activity- for other substituted phosphate groups",2]
["phosphotransferase activity- nitrogenous group as acceptor",3]
["phosphotransferase activity- phosphate group as acceptor",5]
["photoinhibition",4]
["photomorphogenesis",11]
["photoperiodism",11]
["photoperiodism- flowering",8]
["photoprotection",4]
["photoreactive repair",1]
["photoreceptor activity",1]
["photoreceptor cell cilium",1]
["photoreceptor connecting cilium",1]
["photorespiration",7]
["photosynthesis",30]
["photosynthesis- dark reaction",4]
["photosynthesis- light harvesting",7]
["photosynthesis- light harvesting in photosystem I",3]
["photosynthesis- light reaction",25]
["photosynthetic acclimation",1]
["photosynthetic electron transport chain",8]
["photosynthetic electron transport in photosystem I",2]
["photosynthetic electron transport in photosystem II",3]
["photosynthetic membrane",68]
["photosystem",1]
["photosystem I assembly",4]
["photosystem II",1]
["photosystem II antenna complex",1]
["photosystem II assembly",7]
["photosystem II oxygen evolving complex assembly",2]
["photosystem II repair",3]
["photosystem II stabilization",1]
["photosystem stoichiometry adjustment",2]
["phototransduction",1]
["phototropism",1]
["phragmoplast",10]
["phragmoplast microtubule organization",1]
["phyllome development",67]
["phylloquinone biosynthetic process",1]
["phylloquinone metabolic process",1]
["phytoalexin biosynthetic process",1]
["phytoalexin metabolic process",1]
["phytoceramidase activity",1]
["phytochelatin biosynthetic process",1]
["phytochelatin metabolic process",1]
["phytochromobilin biosynthetic process",1]
["phytochromobilin metabolic process",1]
["phytochromobilin:ferredoxin oxidoreductase activity",1]
["phytol kinase activity",1]
["phytosphingosine biosynthetic process",1]
["phytosphingosine metabolic process",2]
["phytosteroid biosynthetic process",3]
["phytosteroid metabolic process",3]
["phytyl diphosphate biosynthetic process",1]
["phytyl diphosphate metabolic process",1]
["piecemeal microautophagy of the nucleus",2]
["pigment accumulation",1]
["pigment accumulation in response to UV light",1]
["pigment accumulation in tissues",1]
["pigment accumulation in tissues in response to UV light",1]
["pigment binding",3]
["pigment biosynthetic process",29]
["pigment catabolic process",3]
["pigment metabolic process",35]
["pigmentation",1]
["pinocytosis",1]
["pinosome",1]
["piRNA metabolic process",1]
["plant epidermal cell differentiation",22]
["plant epidermis development",41]
["plant epidermis morphogenesis",16]
["plant organ development",143]
["plant organ formation",23]
["plant organ morphogenesis",65]
["plant organ senescence",18]
["plant ovule development",9]
["plant-type cell wall",27]
["plant-type cell wall assembly",1]
["plant-type cell wall biogenesis",17]
["plant-type cell wall cellulose biosynthetic process",1]
["plant-type cell wall cellulose metabolic process",2]
["plant-type cell wall loosening",1]
["plant-type cell wall modification",3]
["plant-type cell wall modification involved in multidimensional cell growth",1]
["plant-type cell wall organization",13]
["plant-type cell wall organization or biogenesis",24]
["plant-type hypersensitive response",4]
["plant-type ovary development",9]
["plant-type primary cell wall biogenesis",1]
["plant-type secondary cell wall biogenesis",4]
["plant-type sporogenesis",2]
["plant-type vacuole",34]
["plant-type vacuole membrane",24]
["plasma membrane",281]
["plasma membrane bounded cell projection",27]
["plasma membrane bounded cell projection assembly",9]
["plasma membrane bounded cell projection cytoplasm",5]
["plasma membrane bounded cell projection morphogenesis",2]
["plasma membrane bounded cell projection organization",14]
["plasma membrane fusion",1]
["plasma membrane protein complex",5]
["plasma membrane pyruvate transport",1]
["plasma membrane region",6]
["plasmalogen synthase activity",1]
["plasmid maintenance",1]
["plasmodesma",121]
["plasmodesma organization",3]
["plasmodesmata-mediated intercellular transport",2]
["plastid",480]
["plastid chromosome",5]
["plastid DNA metabolic process",1]
["plastid DNA packaging",1]
["plastid DNA replication",1]
["plastid envelope",164]
["plastid fission",7]
["plastid inner membrane",23]
["plastid large ribosomal subunit",1]
["plastid localization",1]
["plastid membrane",42]
["plastid membrane organization",12]
["plastid nucleoid",10]
["plastid organization",61]
["plastid outer membrane",15]
["plastid ribosome",2]
["plastid stroma",173]
["plastid thylakoid",82]
["plastid thylakoid lumen",2]
["plastid thylakoid membrane",62]
["plastid transcription",3]
["plastid translation",5]
["plastid-encoded plastid RNA polymerase complex",3]
["plastoglobule",19]
["plastoglobule organization",2]
["plastoquinone biosynthetic process",1]
["platelet degranulation",1]
["plus-end specific microtubule depolymerization",1]
["PML body",2]
["podosome",1]
["polar nucleus fusion",3]
["polarity specification of adaxial/abaxial axis",1]
["pole plasm",1]
["pollen development",50]
["pollen exine formation",8]
["pollen germination",11]
["pollen hydration",1]
["pollen maturation",2]
["pollen sperm cell differentiation",2]
["pollen tube",7]
["pollen tube adhesion",1]
["pollen tube development",17]
["pollen tube growth",10]
["pollen tube guidance",5]
["pollen tube reception",3]
["pollen tube tip",1]
["pollen wall assembly",11]
["pollen-pistil interaction",4]
["pollination",30]
["poly-pyrimidine tract binding",8]
["poly(A)+ mRNA export from nucleus",3]
["poly(ADP-ribose) glycohydrolase activity",1]
["poly(U) RNA binding",6]
["polyadenylation-dependent mRNA catabolic process",2]
["polyadenylation-dependent ncRNA catabolic process",6]
["polyadenylation-dependent RNA catabolic process",6]
["polyadenylation-dependent snoRNA 3'-end processing",2]
["polyamine binding",1]
["polyamine biosynthetic process",4]
["polyamine catabolic process",1]
["polyamine metabolic process",5]
["polyamine oxidase activity",1]
["polyamine transmembrane transport",1]
["polyamine transmembrane transporter activity",1]
["polyamine transport",2]
["polygalacturonate 4-alpha-galacturonosyltransferase activity",6]
["polyketide biosynthetic process",1]
["polyketide metabolic process",1]
["polymeric cytoskeletal fiber",18]
["polynucleotide 5' dephosphorylation",1]
["polynucleotide 5'-hydroxyl-kinase activity",2]
["polynucleotide 5'-phosphatase activity",1]
["polynucleotide adenylyltransferase activity",3]
["polynucleotide dephosphorylation",1]
["polynucleotide phosphatase activity",1]
["polyol biosynthetic process",11]
["polyol catabolic process",5]
["polyol metabolic process",18]
["polyol transmembrane transporter activity",2]
["polyol transport",2]
["polyphosphate biosynthetic process",1]
["polyphosphate metabolic process",1]
["polyprenol biosynthetic process",1]
["polyprenol metabolic process",1]
["polyprenyltransferase activity",2]
["polyribonucleotide nucleotidyltransferase activity",1]
["polysaccharide binding",5]
["polysaccharide biosynthetic process",28]
["polysaccharide catabolic process",16]
["polysaccharide localization",7]
["polysaccharide metabolic process",50]
["polysomal ribosome",7]
["polysome",11]
["polyubiquitin modification-dependent protein binding",3]
["polyuridylation-dependent mRNA catabolic process",1]
["porphobilinogen synthase activity",1]
["porphyrin-containing compound biosynthetic process",14]
["porphyrin-containing compound catabolic process",4]
["porphyrin-containing compound metabolic process",20]
["positive chemotaxis",5]
["positive gravitropism",2]
["positive regulation by host of viral genome replication",1]
["positive regulation by host of viral process",2]
["positive regulation of abscisic acid-activated signaling pathway",6]
["positive regulation of actin filament polymerization",4]
["positive regulation of actin nucleation",1]
["positive regulation of alcohol biosynthetic process",1]
["positive regulation of angiogenesis",1]
["positive regulation of anion channel activity",1]
["positive regulation of anion transmembrane transport",1]
["positive regulation of anion transport",2]
["positive regulation of apoptotic process",3]
["positive regulation of apoptotic signaling pathway",1]
["positive regulation of asexual reproduction",1]
["positive regulation of ATP biosynthetic process",1]
["positive regulation of ATP metabolic process",1]
["positive regulation of ATPase activity",2]
["positive regulation of autophagy",6]
["positive regulation of auxin mediated signaling pathway",1]
["positive regulation of behavior",1]
["positive regulation of biological process",203]
["positive regulation of biosynthetic process",52]
["positive regulation of canonical Wnt signaling pathway",1]
["positive regulation of carotenoid biosynthetic process",1]
["positive regulation of catabolic process",18]
["positive regulation of catalytic activity",51]
["positive regulation of cation transmembrane transport",1]
["positive regulation of cell adhesion",1]
["positive regulation of cell adhesion involved in single-species biofilm formation",1]
["positive regulation of cell communication",31]
["positive regulation of cell cycle",28]
["positive regulation of cell cycle checkpoint",2]
["positive regulation of cell cycle G1/S phase transition",2]
["positive regulation of cell cycle G2/M phase transition",4]
["positive regulation of cell cycle phase transition",9]
["positive regulation of cell cycle process",19]
["positive regulation of cell death",5]
["positive regulation of cell development",3]
["positive regulation of cell differentiation",8]
["positive regulation of cell division",7]
["positive regulation of cell fate commitment",1]
["positive regulation of cell growth",7]
["positive regulation of cell migration",3]
["positive regulation of cell motility",3]
["positive regulation of cell population proliferation",16]
["positive regulation of cell projection organization",1]
["positive regulation of cell size",2]
["positive regulation of cell-substrate adhesion",1]
["positive regulation of cellular amide metabolic process",3]
["positive regulation of cellular biosynthetic process",51]
["positive regulation of cellular catabolic process",17]
["positive regulation of cellular component biogenesis",9]
["positive regulation of cellular component movement",4]
["positive regulation of cellular component organization",27]
["positive regulation of cellular metabolic process",98]
["positive regulation of cellular process",156]
["positive regulation of cellular protein catabolic process",8]
["positive regulation of cellular protein localization",7]
["positive regulation of cellular protein metabolic process",41]
["positive regulation of cellular response to alcohol",6]
["positive regulation of cellular response to drug",2]
["positive regulation of cellular response to heat",1]
["positive regulation of cellular response to oxidative stress",1]
["positive regulation of chemotaxis",1]
["positive regulation of chlorophyll biosynthetic process",1]
["positive regulation of chromatin organization",4]
["positive regulation of chromosome organization",9]
["positive regulation of chromosome segregation",4]
["positive regulation of chromosome separation",3]
["positive regulation of circadian rhythm",1]
["positive regulation of clathrin-dependent endocytosis",1]
["positive regulation of collagen biosynthetic process",1]
["positive regulation of collagen metabolic process",1]
["positive regulation of conidium formation",1]
["positive regulation of conjugation",1]
["positive regulation of conjugation with cellular fusion",1]
["positive regulation of cyclin-dependent protein kinase activity",2]
["positive regulation of cyclin-dependent protein serine/threonine kinase activity",2]
["positive regulation of cysteine-type endopeptidase activity",1]
["positive regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["positive regulation of cytochrome-c oxidase activity",1]
["positive regulation of cytokine production",3]
["positive regulation of cytokinesis",1]
["positive regulation of cytokinin-activated signaling pathway",2]
["positive regulation of cytoplasmic transport",3]
["positive regulation of cytoskeleton organization",5]
["positive regulation of cytosolic calcium ion concentration",1]
["positive regulation of defense response",19]
["positive regulation of defense response to bacterium",3]
["positive regulation of defense response to oomycetes",1]
["positive regulation of defense response to virus by host",1]
["positive regulation of dendrite extension",1]
["positive regulation of dense core granule transport",1]
["positive regulation of deoxyribonuclease activity",1]
["positive regulation of dephosphorylation",1]
["positive regulation of developmental growth",3]
["positive regulation of developmental process",21]
["positive regulation of DNA biosynthetic process",5]
["positive regulation of DNA endoreduplication",2]
["positive regulation of DNA metabolic process",10]
["positive regulation of DNA repair",2]
["positive regulation of DNA replication",2]
["positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["positive regulation of DNA-binding transcription factor activity",2]
["positive regulation of DNA-dependent DNA replication",2]
["positive regulation of DNA-directed DNA polymerase activity",4]
["positive regulation of DNA-templated transcription- elongation",3]
["positive regulation of DNA-templated transcription- initiation",1]
["positive regulation of early endosome to late endosome transport",2]
["positive regulation of electron transfer activity",1]
["positive regulation of embryonic development",1]
["positive regulation of endocytic recycling",1]
["positive regulation of endocytosis",4]
["positive regulation of endodeoxyribonuclease activity",1]
["positive regulation of endopeptidase activity",2]
["positive regulation of epidermal growth factor receptor signaling pathway",1]
["positive regulation of epidermal growth factor-activated receptor activity",1]
["positive regulation of epithelial to mesenchymal transition",1]
["positive regulation of ERBB signaling pathway",1]
["positive regulation of ERK1 and ERK2 cascade",1]
["positive regulation of establishment of protein localization",6]
["positive regulation of establishment of protein localization to mitochondrion",1]
["positive regulation of exocytosis",2]
["positive regulation of exosomal secretion",1]
["positive regulation of fibroblast growth factor receptor signaling pathway",1]
["positive regulation of fibroblast migration",1]
["positive regulation of fibroblast proliferation",1]
["positive regulation of filamentous growth",1]
["positive regulation of filamentous growth of a population of unicellular organisms",1]
["positive regulation of flavonoid biosynthetic process",1]
["positive regulation of flower development",4]
["positive regulation of G0 to G1 transition",1]
["positive regulation of G1/S transition of mitotic cell cycle",2]
["positive regulation of G2/M transition of mitotic cell cycle",4]
["positive regulation of gene expression",46]
["positive regulation of gene expression- epigenetic",5]
["positive regulation of gibberellic acid mediated signaling pathway",2]
["positive regulation of glial cell differentiation",1]
["positive regulation of gliogenesis",1]
["positive regulation of glycoprotein biosynthetic process",1]
["positive regulation of glycoprotein metabolic process",1]
["positive regulation of growth",10]
["positive regulation of growth of unicellular organism as a thread of attached cells",1]
["positive regulation of GTPase activity",11]
["positive regulation of hematopoietic progenitor cell differentiation",1]
["positive regulation of hemopoiesis",1]
["positive regulation of histone acetylation",1]
["positive regulation of histone H3-K27 methylation",1]
["positive regulation of histone H3-K27 trimethylation",1]
["positive regulation of histone H3-K4 methylation",1]
["positive regulation of histone methylation",3]
["positive regulation of histone modification",4]
["positive regulation of hydrolase activity",21]
["positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["positive regulation of I-kappaB kinase/NF-kappaB signaling",1]
["positive regulation of immune effector process",1]
["positive regulation of immune response",18]
["positive regulation of immune system process",20]
["positive regulation of innate immune response",16]
["positive regulation of insulin-like growth factor receptor signaling pathway",2]
["positive regulation of interleukin-1 production",1]
["positive regulation of interleukin-8 production",2]
["positive regulation of intracellular protein transport",5]
["positive regulation of intracellular signal transduction",12]
["positive regulation of intracellular transport",10]
["positive regulation of intrinsic apoptotic signaling pathway",1]
["positive regulation of invasive growth in response to glucose limitation",1]
["positive regulation of ion transmembrane transport",2]
["positive regulation of ion transmembrane transporter activity",2]
["positive regulation of ion transport",3]
["positive regulation of isomerase activity",1]
["positive regulation of isoprenoid metabolic process",2]
["positive regulation of kinase activity",17]
["positive regulation of lipase activity",3]
["positive regulation of lipid biosynthetic process",2]
["positive regulation of lipid catabolic process",1]
["positive regulation of lipid kinase activity",1]
["positive regulation of lipid localization",1]
["positive regulation of lipid metabolic process",4]
["positive regulation of lipid transport",1]
["positive regulation of lipophagy",2]
["positive regulation of locomotion",5]
["positive regulation of locomotion involved in locomotory behavior",1]
["positive regulation of long-day photoperiodism- flowering",2]
["positive regulation of lymphoid progenitor cell differentiation",1]
["positive regulation of Lys63-specific deubiquitinase activity",1]
["positive regulation of macroautophagy",2]
["positive regulation of macromolecule biosynthetic process",47]
["positive regulation of macromolecule metabolic process",94]
["positive regulation of macropinocytosis",1]
["positive regulation of MAP kinase activity",4]
["positive regulation of MAPK cascade",6]
["positive regulation of mating type switching",1]
["positive regulation of meiotic cell cycle",3]
["positive regulation of meiotic nuclear division",1]
["positive regulation of membrane permeability",1]
["positive regulation of membrane potential",1]
["positive regulation of metabolic process",110]
["positive regulation of metaphase/anaphase transition of cell cycle",3]
["positive regulation of microtubule nucleation",1]
["positive regulation of microtubule polymerization",1]
["positive regulation of microtubule polymerization or depolymerization",1]
["positive regulation of mitochondrial membrane permeability",1]
["positive regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["positive regulation of mitochondrial membrane potential",1]
["positive regulation of mitochondrial RNA catabolic process",1]
["positive regulation of mitochondrion organization",1]
["positive regulation of mitotic cell cycle",15]
["positive regulation of mitotic cell cycle phase transition",9]
["positive regulation of mitotic cell cycle spindle assembly checkpoint",2]
["positive regulation of mitotic cell cycle- embryonic",1]
["positive regulation of mitotic metaphase/anaphase transition",3]
["positive regulation of mitotic nuclear division",4]
["positive regulation of mitotic sister chromatid segregation",3]
["positive regulation of mitotic sister chromatid separation",3]
["positive regulation of molecular function",54]
["positive regulation of mRNA 3'-end processing",1]
["positive regulation of mRNA catabolic process",1]
["positive regulation of mRNA cleavage",1]
["positive regulation of mRNA metabolic process",3]
["positive regulation of mRNA polyadenylation",1]
["positive regulation of mRNA processing",2]
["positive regulation of mRNA splicing- via spliceosome",1]
["positive regulation of multi-organism process",9]
["positive regulation of multicellular organismal process",16]
["positive regulation of muscle cell differentiation",1]
["positive regulation of muscle contraction",1]
["positive regulation of myoblast fusion",1]
["positive regulation of myotube differentiation",1]
["positive regulation of NAD(P)H oxidase activity",1]
["positive regulation of nervous system development",2]
["positive regulation of neurogenesis",2]
["positive regulation of neuron apoptotic process",1]
["positive regulation of neuron death",1]
["positive regulation of neuron differentiation",1]
["positive regulation of neuron migration",1]
["positive regulation of neuron projection development",1]
["positive regulation of NF-kappaB transcription factor activity",1]
["positive regulation of NIK/NF-kappaB signaling",1]
["positive regulation of nitrogen compound metabolic process",85]
["positive regulation of nuclear division",5]
["positive regulation of nuclease activity",1]
["positive regulation of nucleic acid-templated transcription",38]
["positive regulation of nucleobase-containing compound metabolic process",54]
["positive regulation of nucleobase-containing compound transport",1]
["positive regulation of nucleocytoplasmic transport",3]
["positive regulation of nucleotide biosynthetic process",1]
["positive regulation of nucleotide metabolic process",1]
["positive regulation of oligodendrocyte differentiation",1]
["positive regulation of organelle organization",19]
["positive regulation of oviposition",1]
["positive regulation of oxidative phosphorylation",1]
["positive regulation of oxidative stress-induced cell death",1]
["positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidative stress-induced neuron death",1]
["positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidoreductase activity",3]
["positive regulation of pathway-restricted SMAD protein phosphorylation",1]
["positive regulation of peptidase activity",2]
["positive regulation of peptide secretion",1]
["positive regulation of peptidyl-lysine acetylation",1]
["positive regulation of peptidyl-serine phosphorylation",1]
["positive regulation of peptidyl-threonine phosphorylation",3]
["positive regulation of peptidyl-tyrosine phosphorylation",2]
["positive regulation of phosphate metabolic process",25]
["positive regulation of phosphatidylinositol 3-kinase activity",1]
["positive regulation of phospholipase A2 activity",1]
["positive regulation of phospholipase activity",3]
["positive regulation of phospholipase C activity",1]
["positive regulation of phospholipid metabolic process",1]
["positive regulation of phospholipid translocation",1]
["positive regulation of phospholipid transport",1]
["positive regulation of phosphorus metabolic process",25]
["positive regulation of phosphorylation",24]
["positive regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["positive regulation of photomorphogenesis",1]
["positive regulation of phytol biosynthetic process",1]
["positive regulation of pinocytosis",1]
["positive regulation of plant-type hypersensitive response",2]
["positive regulation of post-embryonic development",9]
["positive regulation of posttranscriptional gene silencing",1]
["positive regulation of pro-B cell differentiation",1]
["positive regulation of production of siRNA involved in RNA interference",1]
["positive regulation of programmed cell death",5]
["positive regulation of proteasomal protein catabolic process",7]
["positive regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["positive regulation of protein acetylation",1]
["positive regulation of protein catabolic process",10]
["positive regulation of protein dephosphorylation",1]
["positive regulation of protein deubiquitination",1]
["positive regulation of protein exit from endoplasmic reticulum",2]
["positive regulation of protein export from nucleus",1]
["positive regulation of protein geranylgeranylation",2]
["positive regulation of protein glycosylation",1]
["positive regulation of protein glycosylation in Golgi",1]
["positive regulation of protein import",1]
["positive regulation of protein import into nucleus",1]
["positive regulation of protein K63-linked deubiquitination",1]
["positive regulation of protein kinase activity",16]
["positive regulation of protein localization to cell surface",2]
["positive regulation of protein localization to kinetochore",1]
["positive regulation of protein localization to nucleus",2]
["positive regulation of protein metabolic process",43]
["positive regulation of protein modification by small protein conjugation or removal",3]
["positive regulation of protein modification process",31]
["positive regulation of protein phosphorylation",22]
["positive regulation of protein polymerization",5]
["positive regulation of protein secretion",1]
["positive regulation of protein serine/threonine kinase activity",8]
["positive regulation of protein targeting to mitochondrion",1]
["positive regulation of protein transport",6]
["positive regulation of protein tyrosine kinase activity",1]
["positive regulation of protein ubiquitination",2]
["positive regulation of protein-containing complex assembly",7]
["positive regulation of proteolysis",9]
["positive regulation of proteolysis involved in cellular protein catabolic process",7]
["positive regulation of purine nucleotide biosynthetic process",1]
["positive regulation of purine nucleotide metabolic process",1]
["positive regulation of reactive oxygen species metabolic process",1]
["positive regulation of receptor internalization",3]
["positive regulation of receptor signaling pathway via JAK-STAT",1]
["positive regulation of receptor signaling pathway via STAT",1]
["positive regulation of receptor-mediated endocytosis",3]
["positive regulation of red or far-red light signaling pathway",1]
["positive regulation of reproductive process",12]
["positive regulation of response to alcohol",6]
["positive regulation of response to biotic stimulus",4]
["positive regulation of response to DNA damage stimulus",2]
["positive regulation of response to drug",2]
["positive regulation of response to external stimulus",5]
["positive regulation of response to oxidative stress",2]
["positive regulation of response to salt stress",3]
["positive regulation of response to stimulus",63]
["positive regulation of response to water deprivation",4]
["positive regulation of response to wounding",1]
["positive regulation of ribosome biogenesis",1]
["positive regulation of RNA biosynthetic process",38]
["positive regulation of RNA export from nucleus",1]
["positive regulation of RNA interference",1]
["positive regulation of RNA metabolic process",44]
["positive regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["positive regulation of RNA splicing",1]
["positive regulation of rRNA processing",1]
["positive regulation of salicylic acid mediated signaling pathway",2]
["positive regulation of secondary metabolite biosynthetic process",2]
["positive regulation of secretion",3]
["positive regulation of secretion by cell",3]
["positive regulation of seed germination",2]
["positive regulation of shade avoidance",1]
["positive regulation of signal transduction",30]
["positive regulation of signal transduction by p53 class mediator",1]
["positive regulation of signaling",31]
["positive regulation of signaling receptor activity",1]
["positive regulation of single-species biofilm formation",1]
["positive regulation of sister chromatid cohesion",1]
["positive regulation of small molecule metabolic process",2]
["positive regulation of smooth muscle cell proliferation",1]
["positive regulation of smooth muscle contraction",1]
["positive regulation of smoothened signaling pathway",1]
["positive regulation of spindle checkpoint",2]
["positive regulation of sporulation",1]
["positive regulation of stem cell differentiation",2]
["positive regulation of sterigmatocystin biosynthetic process",1]
["positive regulation of stress-activated MAPK cascade",1]
["positive regulation of stress-activated protein kinase signaling cascade",1]
["positive regulation of striated muscle cell differentiation",1]
["positive regulation of supramolecular fiber organization",5]
["positive regulation of synaptic transmission",1]
["positive regulation of synaptic vesicle recycling",1]
["positive regulation of syncytium formation by plasma membrane fusion",1]
["positive regulation of syringal lignin biosynthetic process",1]
["positive regulation of systemic acquired resistance",2]
["positive regulation of telomerase activity",1]
["positive regulation of telomere maintenance",1]
["positive regulation of telomere maintenance via telomerase",1]
["positive regulation of telomere maintenance via telomere lengthening",1]
["positive regulation of tetrapyrrole biosynthetic process",1]
["positive regulation of tetrapyrrole metabolic process",1]
["positive regulation of TOR signaling",2]
["positive regulation of TORC1 signaling",1]
["positive regulation of transcription by RNA polymerase I",1]
["positive regulation of transcription by RNA polymerase II",12]
["positive regulation of transcription by transcription factor localization",1]
["positive regulation of transcription elongation from RNA polymerase II promoter",3]
["positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation",1]
["positive regulation of transcription from RNA polymerase II promoter in response to stress",1]
["positive regulation of transcription initiation from RNA polymerase II promoter",1]
["positive regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["positive regulation of transcription- DNA-templated",34]
["positive regulation of transferase activity",22]
["positive regulation of translation",3]
["positive regulation of translational initiation",1]
["positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",1]
["positive regulation of transmembrane transport",2]
["positive regulation of transport",18]
["positive regulation of transporter activity",2]
["positive regulation of triglyceride catabolic process",1]
["positive regulation of triglyceride metabolic process",1]
["positive regulation of tumor necrosis factor production",1]
["positive regulation of tumor necrosis factor superfamily cytokine production",1]
["positive regulation of tyrosine phosphorylation of STAT protein",1]
["positive regulation of ubiquitin-dependent protein catabolic process",5]
["positive regulation of ubiquitin-protein transferase activity",1]
["positive regulation of ubiquitin-specific protease activity",1]
["positive regulation of unidimensional cell growth",1]
["positive regulation of urease activity",2]
["positive regulation of vacuole fusion- non-autophagic",1]
["positive regulation of vacuole organization",2]
["positive regulation of vasculature development",1]
["positive regulation of vernalization response",1]
["positive regulation of viral genome replication",1]
["positive regulation of viral life cycle",1]
["positive regulation of viral process",3]
["positive regulation of vitamin E biosynthetic process",1]
["positive regulation of vitamin metabolic process",1]
["positive regulation of Wnt signaling pathway",1]
["positive regulation of wound healing",1]
["post-embryonic animal morphogenesis",2]
["post-embryonic animal organ development",2]
["post-embryonic animal organ morphogenesis",1]
["post-embryonic development",197]
["post-embryonic plant morphogenesis",27]
["post-embryonic plant organ development",32]
["post-embryonic plant organ morphogenesis",20]
["post-embryonic root development",25]
["post-embryonic root morphogenesis",13]
["post-Golgi vesicle-mediated transport",7]
["post-lysosomal vacuole",1]
["post-mRNA release spliceosomal complex",1]
["post-transcriptional gene silencing by RNA",12]
["post-translational protein modification",8]
["postreplication repair",9]
["postsynapse",3]
["postsynaptic membrane",3]
["posttranscriptional gene silencing",13]
["posttranscriptional regulation of gene expression",40]
["posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery",1]
["posttranslational protein targeting to endoplasmic reticulum membrane",3]
["posttranslational protein targeting to membrane- translocation",2]
["potassium channel activity",6]
["potassium ion antiporter activity",2]
["potassium ion binding",1]
["potassium ion homeostasis",2]
["potassium ion import across plasma membrane",1]
["potassium ion leak channel activity",1]
["potassium ion transmembrane transport",11]
["potassium ion transmembrane transporter activity",11]
["potassium ion transport",22]
["potassium ion-transporting ATPase complex",1]
["potassium:proton antiporter activity",2]
["pre-miRNA binding",1]
["pre-mRNA 3'-splice site binding",3]
["pre-mRNA binding",3]
["pre-mRNA cleavage required for polyadenylation",1]
["pre-replicative complex",3]
["pre-replicative complex assembly",3]
["pre-replicative complex assembly involved in cell cycle DNA replication",3]
["pre-replicative complex assembly involved in nuclear cell cycle DNA replication",3]
["preassembly of GPI anchor in ER membrane",1]
["precatalytic spliceosome",8]
["prefoldin complex",1]
["prenylated protein catabolic process",1]
["prenylation",2]
["prenylcysteine catabolic process",1]
["prenylcysteine metabolic process",1]
["prenylcysteine methylesterase activity",1]
["prenylcysteine oxidase activity",1]
["prenyltransferase activity",9]
["preprophase band",1]
["preprophase band assembly",1]
["preprotein binding",1]
["preribosome",20]
["preribosome- large subunit precursor",8]
["preribosome- small subunit precursor",1]
["prespliceosome",6]
["presynapse",3]
["prevention of polyspermy",1]
["primary active transmembrane transporter activity",28]
["primary alcohol metabolic process",2]
["primary cell septum",1]
["primary cell septum disassembly",1]
["primary lysosome",1]
["primary meristem tissue development",3]
["primary metabolic process",1020]
["primary miRNA binding",1]
["primary miRNA processing",2]
["primary palate development",1]
["primary root development",4]
["primary shoot apical meristem specification",2]
["procambium histogenesis",1]
["process utilizing autophagic mechanism",20]
["procollagen-proline 4-dioxygenase activity",1]
["procollagen-proline dioxygenase activity",1]
["production of miRNAs involved in gene silencing by miRNA",6]
["production of molecular mediator of immune response",1]
["production of siRNA involved in chromatin silencing by small RNA",1]
["production of siRNA involved in RNA interference",4]
["production of small RNA involved in gene silencing by RNA",8]
["production of ta-siRNAs involved in RNA interference",2]
["profilin binding",1]
["programmed cell death",19]
["programmed cell death in response to reactive oxygen species",3]
["programmed cell death induced by symbiont",4]
["programmed cell death involved in cell development",3]
["progressive alteration of chromatin involved in cell aging",1]
["proline biosynthetic process",1]
["proline catabolic process",1]
["proline catabolic process to glutamate",1]
["proline metabolic process",3]
["proline-rich region binding",1]
["proline-tRNA ligase activity",1]
["prolyl-tRNA aminoacylation",1]
["promoter-specific chromatin binding",2]
["prostaglandin biosynthetic process",1]
["prostaglandin metabolic process",2]
["prostanoid biosynthetic process",1]
["prostanoid metabolic process",2]
["prostate gland development",1]
["prostate gland growth",1]
["prosthetic group metabolic process",2]
["protease binding",5]
["proteasomal protein catabolic process",34]
["proteasome accessory complex",7]
["proteasome assembly",7]
["proteasome binding",2]
["proteasome complex",20]
["proteasome core complex",8]
["proteasome core complex- alpha-subunit complex",3]
["proteasome core complex- beta-subunit complex",5]
["proteasome regulatory particle",7]
["proteasome regulatory particle assembly",2]
["proteasome regulatory particle- base subcomplex",2]
["proteasome regulatory particle- lid subcomplex",5]
["proteasome-activating activity",1]
["proteasome-mediated ubiquitin-dependent protein catabolic process",31]
["protection from non-homologous end joining at telomere",2]
["protein acetylation",7]
["protein acetyltransferase complex",4]
["protein acylation",8]
["protein alkylation",21]
["protein autophosphorylation",29]
["protein autosumoylation",1]
["protein autoubiquitination",4]
["protein binding",299]
["protein biotinylation",1]
["protein C-terminal methylesterase activity",1]
["protein C-terminus binding",2]
["protein catabolic process",78]
["protein complex oligomerization",24]
["protein deacetylase activity",1]
["protein deacetylation",3]
["protein deacylation",4]
["protein dealkylation",3]
["protein deglycosylation",3]
["protein delipidation",1]
["protein demethylation",3]
["protein denaturation",1]
["protein deneddylation",6]
["protein depalmitoylation",1]
["protein dephosphorylation",17]
["protein depolymerization",2]
["protein destabilization",2]
["protein deubiquitination",4]
["protein dimerization activity",44]
["protein disulfide isomerase activity",9]
["protein domain specific binding",26]
["protein exit from endoplasmic reticulum",3]
["protein export from nucleus",19]
["protein farnesylation",1]
["protein farnesyltransferase activity",1]
["protein farnesyltransferase complex",1]
["protein folding",34]
["protein folding chaperone",10]
["protein folding in endoplasmic reticulum",3]
["protein geranylgeranylation",1]
["protein geranylgeranyltransferase activity",1]
["protein glutathionylation",2]
["protein glycosylation",33]
["protein glycosylation in endoplasmic reticulum",1]
["protein heterodimerization activity",8]
["protein heterooligomerization",3]
["protein heterotetramerization",2]
["protein heterotrimerization",1]
["protein hexamerization",5]
["protein histidine kinase activity",3]
["protein histidine kinase binding",2]
["protein homodimerization activity",38]
["protein homooligomerization",14]
["protein homotetramerization",5]
["protein homotrimerization",1]
["protein hydroxylation",1]
["protein import",30]
["protein import into chloroplast stroma",6]
["protein import into mitochondrial intermembrane space",1]
["protein import into mitochondrial matrix",5]
["protein import into nucleus",14]
["protein import into peroxisome matrix",3]
["protein import into peroxisome matrix- docking",1]
["protein insertion into ER membrane",2]
["protein insertion into membrane",2]
["protein insertion into mitochondrial outer membrane",1]
["protein K48-linked ubiquitination",1]
["protein K63-linked ubiquitination",1]
["protein K69-linked ufmylation",1]
["protein kinase A binding",1]
["protein kinase A regulatory subunit binding",1]
["protein kinase activator activity",2]
["protein kinase activity",73]
["protein kinase binding",8]
["protein kinase complex",8]
["protein kinase regulator activity",6]
["protein lipidation",10]
["protein lipoylation",3]
["protein localization",111]
["protein localization to basolateral plasma membrane",1]
["protein localization to cell periphery",4]
["protein localization to chloroplast",9]
["protein localization to chromosome",1]
["protein localization to chromosome- centromeric region",1]
["protein localization to ciliary membrane",1]
["protein localization to cilium",2]
["protein localization to cytoskeleton",1]
["protein localization to endoplasmic reticulum",5]
["protein localization to Golgi apparatus",1]
["protein localization to Golgi membrane",1]
["protein localization to kinetochore",1]
["protein localization to lysosome",3]
["protein localization to meiotic spindle",1]
["protein localization to meiotic spindle midzone",1]
["protein localization to membrane",16]
["protein localization to microtubule cytoskeleton",1]
["protein localization to mitochondrion",8]
["protein localization to non-motile cilium",1]
["protein localization to nuclear envelope",2]
["protein localization to nuclear inner membrane",2]
["protein localization to nucleus",17]
["protein localization to organelle",61]
["protein localization to peroxisome",5]
["protein localization to phagophore assembly site",4]
["protein localization to plasma membrane",2]
["protein localization to trailing edge",1]
["protein localization to uropod",1]
["protein localization to vacuole",12]
["protein maturation",12]
["protein metabolic process",422]
["protein methylation",21]
["protein methylesterase activity",2]
["protein methyltransferase activity",13]
["protein modification by small protein conjugation",65]
["protein modification by small protein conjugation or removal",74]
["protein modification by small protein removal",10]
["protein modification process",282]
["protein monoubiquitination",3]
["protein myristoylation",1]
["protein N-acetylglucosaminyltransferase activity",1]
["protein N-linked glycosylation",23]
["protein N-linked glycosylation via asparagine",8]
["protein neddylation",2]
["protein O-linked fucosylation",1]
["protein O-linked glycosylation",5]
["protein O-linked glycosylation via hydroxyproline",3]
["protein peptidyl-prolyl isomerization",17]
["protein phosphatase 2A binding",3]
["protein phosphatase 2B binding",1]
["protein phosphatase binding",5]
["protein phosphatase inhibitor activity",3]
["protein phosphatase regulator activity",8]
["protein phosphatase type 2A complex",2]
["protein phosphorylated amino acid binding",2]
["protein phosphorylation",79]
["protein polymerization",4]
["protein polyubiquitination",18]
["protein polyufmylation",1]
["protein prenylation",2]
["protein prenyltransferase activity",2]
["protein processing",6]
["protein quality control for misfolded or incompletely synthesized proteins",6]
["protein refolding",1]
["protein repair",3]
["protein retention in ER lumen",1]
["protein secretion",1]
["protein self-association",19]
["protein serine/threonine kinase activator activity",1]
["protein serine/threonine kinase activity",58]
["protein serine/threonine phosphatase activity",6]
["protein serine/threonine phosphatase complex",2]
["protein serine/threonine phosphatase inhibitor activity",1]
["protein serine/threonine/tyrosine kinase activity",7]
["protein stabilization",4]
["protein storage vacuole",2]
["protein storage vacuole organization",2]
["protein sumoylation",5]
["protein targeting",38]
["protein targeting to chloroplast",9]
["protein targeting to ER",4]
["protein targeting to lysosome",3]
["protein targeting to membrane",7]
["protein targeting to mitochondrion",8]
["protein targeting to peroxisome",5]
["protein targeting to vacuole",8]
["protein tetramerization",9]
["protein to membrane docking",1]
["protein transmembrane import into intracellular organelle",9]
["protein transmembrane transport",20]
["protein transmembrane transporter activity",6]
["protein transport",94]
["protein transport by the Tat complex",1]
["protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",3]
["protein trimerization",3]
["protein tyrosine kinase activity",2]
["protein tyrosine phosphatase activity",6]
["protein tyrosine/serine/threonine phosphatase activity",1]
["protein tyrosine/threonine phosphatase activity",2]
["protein ubiquitination",56]
["protein ufmylation",1]
["protein unfolding",2]
["protein-arginine N-methyltransferase activity",6]
["protein-arginine N5-methyltransferase activity",1]
["protein-arginine omega-N asymmetric methyltransferase activity",4]
["protein-arginine omega-N monomethyltransferase activity",3]
["protein-containing complex",444]
["protein-containing complex assembly",117]
["protein-containing complex binding",39]
["protein-containing complex disassembly",14]
["protein-containing complex localization",25]
["protein-containing complex subunit organization",134]
["protein-cysteine S-palmitoyltransferase complex",2]
["protein-disulfide reductase (NAD(P)) activity",2]
["protein-disulfide reductase activity",5]
["protein-DNA complex",8]
["protein-DNA complex assembly",20]
["protein-DNA complex disassembly",2]
["protein-DNA complex subunit organization",25]
["protein-lysine N-methyltransferase activity",7]
["protein-macromolecule adaptor activity",3]
["protein-membrane adaptor activity",1]
["protein-tyrosine sulfotransferase activity",1]
["proteoglycan biosynthetic process",1]
["proteoglycan metabolic process",4]
["proteolysis",117]
["proteolysis involved in cellular protein catabolic process",66]
["protoderm histogenesis",2]
["proton motive force dependent protein transmembrane transporter activity",1]
["proton transmembrane transport",12]
["proton transmembrane transporter activity",11]
["proton-transporting ATP synthase complex",1]
["proton-transporting ATP synthase complex assembly",3]
["proton-transporting ATPase activity- rotational mechanism",3]
["proton-transporting two-sector ATPase complex",3]
["proton-transporting two-sector ATPase complex assembly",3]
["proton-transporting two-sector ATPase complex- catalytic domain",1]
["proton-transporting V-type ATPase complex",2]
["proton-transporting V-type ATPase- V1 domain",1]
["protoporphyrinogen IX biosynthetic process",1]
["protoporphyrinogen IX metabolic process",1]
["protoporphyrinogen oxidase activity",1]
["Prp19 complex",3]
["pseudopodium assembly",1]
["pseudopodium organization",1]
["pseudouridine synthase activity",9]
["pseudouridine synthesis",10]
["PSII associated light-harvesting complex II",1]
["PSII associated light-harvesting complex II catabolic process",3]
["pteridine-containing compound biosynthetic process",4]
["pteridine-containing compound metabolic process",5]
["pullulanase activity",1]
["purine nucleobase biosynthetic process",2]
["purine nucleobase catabolic process",4]
["purine nucleobase metabolic process",7]
["purine nucleobase salvage",1]
["purine nucleobase transmembrane transport",1]
["purine nucleobase transmembrane transporter activity",1]
["purine nucleobase transport",1]
["purine nucleosidase activity",1]
["purine nucleoside binding",15]
["purine nucleoside biosynthetic process",3]
["purine nucleoside bisphosphate biosynthetic process",4]
["purine nucleoside bisphosphate catabolic process",1]
["purine nucleoside bisphosphate metabolic process",9]
["purine nucleoside diphosphate biosynthetic process",1]
["purine nucleoside diphosphate metabolic process",10]
["purine nucleoside metabolic process",6]
["purine nucleoside monophosphate biosynthetic process",13]
["purine nucleoside monophosphate metabolic process",21]
["purine nucleoside triphosphate biosynthetic process",12]
["purine nucleoside triphosphate metabolic process",20]
["purine nucleotide binding",56]
["purine nucleotide biosynthetic process",21]
["purine nucleotide catabolic process",1]
["purine nucleotide metabolic process",34]
["purine nucleotide transmembrane transporter activity",8]
["purine nucleotide transport",9]
["purine nucleotide-sugar transmembrane transport",5]
["purine nucleotide-sugar transmembrane transporter activity",3]
["purine ribonucleoside binding",15]
["purine ribonucleoside biosynthetic process",3]
["purine ribonucleoside bisphosphate metabolic process",1]
["purine ribonucleoside diphosphate biosynthetic process",1]
["purine ribonucleoside diphosphate metabolic process",10]
["purine ribonucleoside metabolic process",6]
["purine ribonucleoside monophosphate biosynthetic process",13]
["purine ribonucleoside monophosphate metabolic process",21]
["purine ribonucleoside triphosphate binding",53]
["purine ribonucleoside triphosphate biosynthetic process",12]
["purine ribonucleoside triphosphate metabolic process",20]
["purine ribonucleotide binding",56]
["purine ribonucleotide biosynthetic process",20]
["purine ribonucleotide catabolic process",1]
["purine ribonucleotide metabolic process",33]
["purine ribonucleotide transmembrane transporter activity",8]
["purine ribonucleotide transport",9]
["purine-containing compound biosynthetic process",23]
["purine-containing compound catabolic process",5]
["purine-containing compound metabolic process",42]
["purine-containing compound salvage",2]
["purine-containing compound transmembrane transport",4]
["putrescine binding",1]
["putrescine biosynthetic process",3]
["putrescine biosynthetic process from arginine",1]
["putrescine biosynthetic process from arginine- using agmatinase",1]
["putrescine metabolic process",3]
["putrescine transport",1]
["Pwp2p-containing subcomplex of 90S preribosome",2]
["pyridine nucleotide biosynthetic process",14]
["pyridine nucleotide metabolic process",23]
["pyridine nucleotide salvage",1]
["pyridine-containing compound biosynthetic process",16]
["pyridine-containing compound catabolic process",1]
["pyridine-containing compound metabolic process",25]
["pyridoxal 5'-phosphate salvage",2]
["pyridoxal biosynthetic process",1]
["pyridoxal kinase activity",1]
["pyridoxal metabolic process",1]
["pyridoxal phosphate binding",7]
["pyridoxal phosphate biosynthetic process",3]
["pyridoxal phosphate metabolic process",3]
["pyridoxamine-phosphate oxidase activity",1]
["pyridoxine biosynthetic process",1]
["pyridoxine metabolic process",1]
["pyridoxine:NADP 4-dehydrogenase activity",1]
["pyrimidine deoxyribonucleoside metabolic process",1]
["pyrimidine deoxyribonucleotide catabolic process",1]
["pyrimidine deoxyribonucleotide metabolic process",1]
["pyrimidine dimer repair",3]
["pyrimidine dimer repair by nucleotide-excision repair",1]
["pyrimidine nucleobase biosynthetic process",2]
["pyrimidine nucleobase catabolic process",3]
["pyrimidine nucleobase metabolic process",9]
["pyrimidine nucleobase salvage",1]
["pyrimidine nucleoside biosynthetic process",4]
["pyrimidine nucleoside catabolic process",1]
["pyrimidine nucleoside metabolic process",7]
["pyrimidine nucleoside monophosphate biosynthetic process",3]
["pyrimidine nucleoside monophosphate metabolic process",3]
["pyrimidine nucleoside salvage",4]
["pyrimidine nucleotide biosynthetic process",7]
["pyrimidine nucleotide catabolic process",1]
["pyrimidine nucleotide metabolic process",10]
["pyrimidine nucleotide-sugar transmembrane transport",6]
["pyrimidine nucleotide-sugar transmembrane transporter activity",6]
["pyrimidine ribonucleoside biosynthetic process",3]
["pyrimidine ribonucleoside catabolic process",1]
["pyrimidine ribonucleoside metabolic process",5]
["pyrimidine ribonucleoside monophosphate biosynthetic process",3]
["pyrimidine ribonucleoside monophosphate metabolic process",3]
["pyrimidine ribonucleotide biosynthetic process",6]
["pyrimidine ribonucleotide metabolic process",6]
["pyrimidine-containing compound biosynthetic process",15]
["pyrimidine-containing compound catabolic process",5]
["pyrimidine-containing compound metabolic process",22]
["pyrimidine-containing compound salvage",7]
["pyrophosphatase activity",146]
["pyruvate biosynthetic process",10]
["pyruvate dehydrogenase (acetyl-transferring) kinase activity",1]
["pyruvate family amino acid catabolic process",1]
["pyruvate family amino acid metabolic process",2]
["pyruvate kinase activity",2]
["pyruvate metabolic process",17]
["pyruvate transmembrane transport",2]
["pyruvate transmembrane transporter activity",2]
["pyruvate transport",2]
["quaternary ammonium group transmembrane transporter activity",1]
["quaternary ammonium group transport",1]
["queuine tRNA-ribosyltransferase activity",1]
["queuosine biosynthetic process",1]
["queuosine metabolic process",1]
["quiescent center organization",1]
["quinolinate catabolic process",1]
["quinolinate metabolic process",1]
["quinone binding",1]
["quinone biosynthetic process",4]
["quinone metabolic process",4]
["Rab GDP-dissociation inhibitor activity",1]
["Rab geranylgeranyltransferase activity",1]
["Rab protein signal transduction",1]
["Rab-protein geranylgeranyltransferase complex",2]
["racemase activity- acting on amino acids and derivatives",1]
["racemase and epimerase activity",8]
["racemase and epimerase activity- acting on amino acids and derivatives",2]
["racemase and epimerase activity- acting on carbohydrates and derivatives",3]
["racemase and epimerase activity- acting on hydroxy acids and derivatives",1]
["Rad51B-Rad51C-Rad51D-XRCC2 complex",1]
["radial pattern formation",2]
["radial spoke",1]
["Ran protein signal transduction",1]
["Ras protein signal transduction",3]
["rDNA binding",1]
["rDNA protrusion",1]
["reactive nitrogen species metabolic process",2]
["reactive oxygen species biosynthetic process",6]
["reactive oxygen species metabolic process",22]
["receptor catabolic process",1]
["receptor internalization",1]
["receptor internalization involved in canonical Wnt signaling pathway",1]
["receptor ligand activity",1]
["receptor localization to non-motile cilium",1]
["receptor metabolic process",2]
["receptor serine/threonine kinase binding",3]
["receptor-mediated endocytosis",4]
["reciprocal meiotic recombination",14]
["recognition of pollen",2]
["recombinational repair",17]
["recycling endosome",3]
["recycling endosome membrane",1]
["red or far-red light signaling pathway",3]
["red- far-red light phototransduction",1]
["reductive pentose-phosphate cycle",4]
["regeneration",1]
["regionalization",23]
["regulated exocytosis",4]
["regulation of abscisic acid biosynthetic process",1]
["regulation of abscisic acid-activated signaling pathway",14]
["regulation of actin cytoskeleton organization",8]
["regulation of actin filament depolymerization",1]
["regulation of actin filament length",5]
["regulation of actin filament organization",5]
["regulation of actin filament polymerization",5]
["regulation of actin filament-based process",8]
["regulation of actin nucleation",1]
["regulation of actin polymerization or depolymerization",5]
["regulation of activin receptor signaling pathway",1]
["regulation of actomyosin contractile ring contraction",1]
["regulation of actomyosin structure organization",2]
["regulation of adaxial/abaxial pattern formation",1]
["regulation of adenylate cyclase activity",2]
["regulation of aerobic respiration",1]
["regulation of aggregate size involved in sorocarp development",1]
["regulation of aggregation involved in sorocarp development",1]
["regulation of alcohol biosynthetic process",5]
["regulation of alternative mRNA splicing- via spliceosome",4]
["regulation of anatomical structure morphogenesis",29]
["regulation of anatomical structure size",18]
["regulation of androgen receptor signaling pathway",1]
["regulation of angiogenesis",2]
["regulation of animal organ morphogenesis",3]
["regulation of anion channel activity",1]
["regulation of anion transmembrane transport",1]
["regulation of anion transport",3]
["regulation of anoikis",1]
["regulation of anthocyanin biosynthetic process",2]
["regulation of anthocyanin metabolic process",5]
["regulation of antifungal innate immune response",1]
["regulation of antisense RNA transcription",1]
["regulation of apoptotic process",16]
["regulation of apoptotic process involved in development",1]
["regulation of apoptotic signaling pathway",3]
["regulation of arginine biosynthetic process",1]
["regulation of arginine biosynthetic process via ornithine",1]
["regulation of arginine metabolic process",1]
["regulation of asexual reproduction",2]
["regulation of asexual sporulation",1]
["regulation of ATP biosynthetic process",3]
["regulation of ATP metabolic process",3]
["regulation of ATPase activity",2]
["regulation of attachment of spindle microtubules to kinetochore",1]
["regulation of autophagosome assembly",2]
["regulation of autophagy",14]
["regulation of autophagy of mitochondrion",1]
["regulation of auxin biosynthetic process",1]
["regulation of auxin mediated signaling pathway",8]
["regulation of auxin metabolic process",2]
["regulation of auxin polar transport",3]
["regulation of behavior",2]
["regulation of beta-glucan biosynthetic process",2]
["regulation of beta-glucan metabolic process",2]
["regulation of binding",2]
["regulation of biological process",586]
["regulation of biological process involved in symbiotic interaction",5]
["regulation of biological quality",175]
["regulation of biosynthetic process",190]
["regulation of blood circulation",1]
["regulation of blood vessel endothelial cell migration",1]
["regulation of BMP signaling pathway",1]
["regulation of body fluid levels",4]
["regulation of bone development",1]
["regulation of brassinosteroid mediated signaling pathway",3]
["regulation of calcium ion transmembrane transport",1]
["regulation of calcium ion transport",2]
["regulation of calcium ion transport into cytosol",1]
["regulation of canonical Wnt signaling pathway",6]
["regulation of carbohydrate biosynthetic process",5]
["regulation of carbohydrate catabolic process",2]
["regulation of carbohydrate metabolic process",8]
["regulation of carbon utilization",1]
["regulation of cardiac muscle cell apoptotic process",1]
["regulation of cardiac muscle cell proliferation",1]
["regulation of cardiac muscle contraction",1]
["regulation of cardiac muscle contraction by calcium ion signaling",1]
["regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion",1]
["regulation of cardiac muscle tissue development",1]
["regulation of cardiac muscle tissue growth",1]
["regulation of catabolic process",37]
["regulation of catalytic activity",84]
["regulation of cation transmembrane transport",3]
["regulation of cell activation",1]
["regulation of cell adhesion",1]
["regulation of cell adhesion involved in single-species biofilm formation",1]
["regulation of cell aging",1]
["regulation of cell communication",92]
["regulation of cell cycle",74]
["regulation of cell cycle checkpoint",3]
["regulation of cell cycle G1/S phase transition",4]
["regulation of cell cycle G2/M phase transition",9]
["regulation of cell cycle phase transition",25]
["regulation of cell cycle process",46]
["regulation of cell death",31]
["regulation of cell development",8]
["regulation of cell diameter",1]
["regulation of cell differentiation",19]
["regulation of cell division",16]
["regulation of cell fate commitment",1]
["regulation of cell growth",14]
["regulation of cell migration",5]
["regulation of cell migration involved in sprouting angiogenesis",1]
["regulation of cell morphogenesis",9]
["regulation of cell morphogenesis involved in differentiation",1]
["regulation of cell motility",6]
["regulation of cell population proliferation",25]
["regulation of cell projection assembly",3]
["regulation of cell projection organization",6]
["regulation of cell septum assembly",1]
["regulation of cell shape",4]
["regulation of cell size",9]
["regulation of cell wall macromolecule metabolic process",2]
["regulation of cell wall organization or biogenesis",3]
["regulation of cell-substrate adhesion",1]
["regulation of cellular amide metabolic process",19]
["regulation of cellular amine metabolic process",4]
["regulation of cellular amino acid biosynthetic process",1]
["regulation of cellular amino acid metabolic process",4]
["regulation of cellular biosynthetic process",183]
["regulation of cellular carbohydrate metabolic process",5]
["regulation of cellular catabolic process",35]
["regulation of cellular component biogenesis",31]
["regulation of cellular component movement",7]
["regulation of cellular component organization",103]
["regulation of cellular component size",18]
["regulation of cellular ketone metabolic process",9]
["regulation of cellular localization",20]
["regulation of cellular macromolecule biosynthetic process",166]
["regulation of cellular metabolic process",282]
["regulation of cellular pH",6]
["regulation of cellular process",509]
["regulation of cellular protein catabolic process",9]
["regulation of cellular protein localization",12]
["regulation of cellular protein metabolic process",82]
["regulation of cellular respiration",1]
["regulation of cellular response to alcohol",14]
["regulation of cellular response to drug",4]
["regulation of cellular response to growth factor stimulus",2]
["regulation of cellular response to heat",2]
["regulation of cellular response to insulin stimulus",1]
["regulation of cellular response to oxidative stress",1]
["regulation of cellular response to stress",23]
["regulation of cellular response to transforming growth factor beta stimulus",1]
["regulation of cellular senescence",1]
["regulation of cellulose biosynthetic process",2]
["regulation of centromere complex assembly",1]
["regulation of chemotaxis",1]
["regulation of chlorophyll biosynthetic process",5]
["regulation of chlorophyll catabolic process",1]
["regulation of chlorophyll metabolic process",5]
["regulation of cholesterol biosynthetic process",2]
["regulation of cholesterol metabolic process",2]
["regulation of chromatin assembly",1]
["regulation of chromatin assembly or disassembly",1]
["regulation of chromatin organization",17]
["regulation of chromatin silencing",9]
["regulation of chromatin silencing at telomere",2]
["regulation of chromosome organization",35]
["regulation of chromosome segregation",14]
["regulation of chromosome separation",12]
["regulation of cilium assembly",1]
["regulation of circadian rhythm",6]
["regulation of clathrin-dependent endocytosis",1]
["regulation of collagen biosynthetic process",1]
["regulation of collagen metabolic process",1]
["regulation of conidium formation",1]
["regulation of conjugation",1]
["regulation of conjugation with cellular fusion",1]
["regulation of cyclase activity",3]
["regulation of cyclin-dependent protein kinase activity",4]
["regulation of cyclin-dependent protein serine/threonine kinase activity",4]
["regulation of cysteine-type endopeptidase activity",2]
["regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["regulation of cytochrome-c oxidase activity",1]
["regulation of cytokine production",5]
["regulation of cytokine-mediated signaling pathway",1]
["regulation of cytokinesis",5]
["regulation of cytokinetic process",1]
["regulation of cytokinin dehydrogenase activity",1]
["regulation of cytokinin-activated signaling pathway",4]
["regulation of cytoplasmic mRNA processing body assembly",1]
["regulation of cytoplasmic translation",3]
["regulation of cytoplasmic translational elongation",3]
["regulation of cytoplasmic transport",3]
["regulation of cytoskeleton organization",9]
["regulation of cytosolic calcium ion concentration",2]
["regulation of defense response",45]
["regulation of defense response to bacterium",7]
["regulation of defense response to fungus",3]
["regulation of defense response to oomycetes",1]
["regulation of defense response to virus",2]
["regulation of defense response to virus by host",2]
["regulation of dendrite development",2]
["regulation of dendrite extension",1]
["regulation of dendritic spine development",1]
["regulation of dense core granule transport",1]
["regulation of deoxyribonuclease activity",1]
["regulation of dephosphorylation",9]
["regulation of development- heterochronic",9]
["regulation of developmental growth",20]
["regulation of developmental process",115]
["regulation of division septum assembly",1]
["regulation of DNA binding",2]
["regulation of DNA biosynthetic process",9]
["regulation of DNA endoreduplication",9]
["regulation of DNA metabolic process",42]
["regulation of DNA methylation",5]
["regulation of DNA recombination",5]
["regulation of DNA repair",9]
["regulation of DNA replication",21]
["regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["regulation of DNA-binding transcription factor activity",2]
["regulation of DNA-dependent DNA replication",19]
["regulation of DNA-dependent DNA replication initiation",3]
["regulation of DNA-directed DNA polymerase activity",4]
["regulation of DNA-templated transcription in response to stress",1]
["regulation of DNA-templated transcription- elongation",5]
["regulation of DNA-templated transcription- initiation",4]
["regulation of DNA-templated transcription- termination",2]
["regulation of double-strand break repair",3]
["regulation of double-strand break repair via homologous recombination",2]
["regulation of early endosome to late endosome transport",2]
["regulation of electron transfer activity",1]
["regulation of embryo sac egg cell differentiation",1]
["regulation of embryonic development",3]
["regulation of endocytic recycling",1]
["regulation of endocytosis",6]
["regulation of endodeoxyribonuclease activity",1]
["regulation of endopeptidase activity",4]
["regulation of endoplasmic reticulum unfolded protein response",1]
["regulation of endosome organization",1]
["regulation of endosome size",1]
["regulation of endothelial cell migration",1]
["regulation of entry of bacterium into host cell",1]
["regulation of epidermal cell differentiation",2]
["regulation of epidermal cell division",1]
["regulation of epidermal growth factor receptor signaling pathway",2]
["regulation of epidermal growth factor-activated receptor activity",1]
["regulation of epidermis development",2]
["regulation of epithelial cell differentiation",2]
["regulation of epithelial cell migration",1]
["regulation of epithelial cell proliferation",1]
["regulation of epithelial to mesenchymal transition",1]
["regulation of ER to Golgi vesicle-mediated transport",1]
["regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["regulation of ERAD pathway",2]
["regulation of ERBB signaling pathway",2]
["regulation of ERK1 and ERK2 cascade",3]
["regulation of establishment of cell polarity",2]
["regulation of establishment of planar polarity",2]
["regulation of establishment of protein localization",12]
["regulation of establishment of protein localization to mitochondrion",1]
["regulation of establishment or maintenance of cell polarity",2]
["regulation of ethylene biosynthetic process",3]
["regulation of ethylene-activated signaling pathway",7]
["regulation of exit from mitosis",1]
["regulation of exocytosis",2]
["regulation of exosomal secretion",1]
["regulation of extrinsic apoptotic signaling pathway",1]
["regulation of fat cell differentiation",1]
["regulation of fatty acid biosynthetic process",1]
["regulation of fatty acid metabolic process",1]
["regulation of fatty acid transport",1]
["regulation of feeding behavior",1]
["regulation of female receptivity",1]
["regulation of fertilization",1]
["regulation of fibroblast growth factor receptor signaling pathway",1]
["regulation of fibroblast migration",1]
["regulation of fibroblast proliferation",1]
["regulation of filamentous growth",1]
["regulation of filamentous growth of a population of unicellular organisms",1]
["regulation of flavonoid biosynthetic process",3]
["regulation of floral organ abscission",1]
["regulation of flower development",21]
["regulation of G protein-coupled receptor signaling pathway",1]
["regulation of G0 to G1 transition",1]
["regulation of G1/S transition of mitotic cell cycle",4]
["regulation of G2/M transition of mitotic cell cycle",8]
["regulation of gene expression",203]
["regulation of gene expression by genetic imprinting",3]
["regulation of gene expression- epigenetic",29]
["regulation of gene silencing",19]
["regulation of gene silencing by miRNA",3]
["regulation of gene silencing by RNA",5]
["regulation of generation of precursor metabolites and energy",11]
["regulation of genetic imprinting",2]
["regulation of gibberellic acid mediated signaling pathway",3]
["regulation of glial cell differentiation",1]
["regulation of gliogenesis",1]
["regulation of glucan biosynthetic process",2]
["regulation of gluconeogenesis",1]
["regulation of glucose metabolic process",1]
["regulation of glutamine family amino acid metabolic process",1]
["regulation of glycolytic process",2]
["regulation of glycoprotein biosynthetic process",1]
["regulation of glycoprotein metabolic process",1]
["regulation of growth",38]
["regulation of growth of unicellular organism as a thread of attached cells",1]
["regulation of growth rate",2]
["regulation of GTPase activity",14]
["regulation of heart contraction",1]
["regulation of heart growth",1]
["regulation of hematopoietic progenitor cell differentiation",1]
["regulation of hemopoiesis",3]
["regulation of heterochromatin assembly",1]
["regulation of heterochromatin island assembly",1]
["regulation of hippo signaling",1]
["regulation of histone acetylation",3]
["regulation of histone H3-K27 methylation",1]
["regulation of histone H3-K27 trimethylation",1]
["regulation of histone H3-K36 methylation",2]
["regulation of histone H3-K36 trimethylation",2]
["regulation of histone H3-K4 methylation",1]
["regulation of histone H3-K9 methylation",1]
["regulation of histone H4 acetylation",1]
["regulation of histone methylation",7]
["regulation of histone modification",9]
["regulation of hormone biosynthetic process",3]
["regulation of hormone levels",44]
["regulation of hormone metabolic process",7]
["regulation of hydrogen peroxide metabolic process",1]
["regulation of hydrolase activity",35]
["regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["regulation of I-kappaB kinase/NF-kappaB signaling",2]
["regulation of immune effector process",3]
["regulation of immune response",27]
["regulation of immune system process",30]
["regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["regulation of inflammatory response",1]
["regulation of innate immune response",23]
["regulation of inositol phosphate biosynthetic process",1]
["regulation of inositol trisphosphate biosynthetic process",1]
["regulation of insulin receptor signaling pathway",1]
["regulation of insulin-like growth factor receptor signaling pathway",2]
["regulation of interleukin-1 production",1]
["regulation of interleukin-8 production",4]
["regulation of intracellular estrogen receptor signaling pathway",1]
["regulation of intracellular pH",6]
["regulation of intracellular protein transport",10]
["regulation of intracellular signal transduction",32]
["regulation of intracellular steroid hormone receptor signaling pathway",2]
["regulation of intracellular transport",16]
["regulation of intralumenal vesicle formation",1]
["regulation of intrinsic apoptotic signaling pathway",2]
["regulation of invasive growth in response to glucose limitation",1]
["regulation of ion transmembrane transport",4]
["regulation of ion transmembrane transporter activity",3]
["regulation of ion transport",8]
["regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter",2]
["regulation of iron ion transport",2]
["regulation of iron-sulfur cluster assembly",1]
["regulation of isomerase activity",1]
["regulation of isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",1]
["regulation of isoprenoid metabolic process",4]
["regulation of jasmonic acid mediated signaling pathway",4]
["regulation of JNK cascade",1]
["regulation of kinase activity",25]
["regulation of kinetochore assembly",1]
["regulation of L-ascorbic acid biosynthetic process",1]
["regulation of lateral root development",1]
["regulation of leaf development",7]
["regulation of leaf morphogenesis",1]
["regulation of leaf senescence",1]
["regulation of leukocyte activation",1]
["regulation of leukocyte differentiation",1]
["regulation of leukocyte proliferation",1]
["regulation of lignin biosynthetic process",2]
["regulation of lipase activity",3]
["regulation of lipid biosynthetic process",7]
["regulation of lipid catabolic process",1]
["regulation of lipid kinase activity",1]
["regulation of lipid localization",3]
["regulation of lipid metabolic process",11]
["regulation of lipid storage",1]
["regulation of lipid transport",2]
["regulation of lipophagy",2]
["regulation of localization",53]
["regulation of locomotion",8]
["regulation of locomotion involved in locomotory behavior",1]
["regulation of long-day photoperiodism- flowering",3]
["regulation of lyase activity",2]
["regulation of lymphoid progenitor cell differentiation",1]
["regulation of lysosomal lumen pH",1]
["regulation of macroautophagy",6]
["regulation of macromolecule biosynthetic process",170]
["regulation of macromolecule metabolic process",287]
["regulation of macropinocytosis",1]
["regulation of MAP kinase activity",7]
["regulation of MAPK cascade",11]
["regulation of mast cell activation",1]
["regulation of mast cell activation involved in immune response",1]
["regulation of mast cell proliferation",1]
["regulation of mating type switching",1]
["regulation of megakaryocyte differentiation",1]
["regulation of meiosis I",2]
["regulation of meiotic cell cycle",9]
["regulation of meiotic cell cycle phase transition",1]
["regulation of meiotic chromosome separation",1]
["regulation of meiotic nuclear division",6]
["regulation of membrane lipid distribution",2]
["regulation of membrane permeability",2]
["regulation of membrane potential",11]
["regulation of meristem development",24]
["regulation of meristem growth",11]
["regulation of meristem structural organization",5]
["regulation of mesoderm development",1]
["regulation of metabolic process",337]
["regulation of metal ion transport",4]
["regulation of metaphase/anaphase transition of cell cycle",12]
["regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["regulation of MHC class II biosynthetic process",2]
["regulation of microtubule cytoskeleton organization",1]
["regulation of microtubule motor activity",1]
["regulation of microtubule nucleation",1]
["regulation of microtubule polymerization",1]
["regulation of microtubule polymerization or depolymerization",1]
["regulation of microtubule-based process",2]
["regulation of mitochondrial membrane permeability",2]
["regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["regulation of mitochondrial membrane potential",2]
["regulation of mitochondrial RNA catabolic process",1]
["regulation of mitochondrion organization",1]
["regulation of mitotic cell cycle",40]
["regulation of mitotic cell cycle DNA replication",1]
["regulation of mitotic cell cycle phase transition",24]
["regulation of mitotic cell cycle spindle assembly checkpoint",3]
["regulation of mitotic cell cycle- embryonic",1]
["regulation of mitotic cytokinesis",1]
["regulation of mitotic cytokinetic process",1]
["regulation of mitotic metaphase/anaphase transition",12]
["regulation of mitotic nuclear division",15]
["regulation of mitotic sister chromatid segregation",12]
["regulation of mitotic sister chromatid separation",12]
["regulation of mitotic spindle checkpoint",3]
["regulation of molecular function",93]
["regulation of morphogenesis of a branching structure",5]
["regulation of morphogenesis of an epithelium",2]
["regulation of mRNA 3'-end processing",1]
["regulation of mRNA catabolic process",6]
["regulation of mRNA cleavage",1]
["regulation of mRNA export from nucleus",1]
["regulation of mRNA metabolic process",13]
["regulation of mRNA polyadenylation",1]
["regulation of mRNA processing",8]
["regulation of mRNA splicing- via spliceosome",6]
["regulation of mRNA stability",6]
["regulation of multi-organism process",25]
["regulation of multicellular organism growth",1]
["regulation of multicellular organismal development",84]
["regulation of multicellular organismal process",91]
["regulation of muscle cell apoptotic process",1]
["regulation of muscle cell differentiation",2]
["regulation of muscle contraction",2]
["regulation of muscle organ development",1]
["regulation of muscle system process",2]
["regulation of muscle tissue development",1]
["regulation of myeloid cell differentiation",2]
["regulation of myeloid leukocyte differentiation",1]
["regulation of myoblast fusion",1]
["regulation of myotube differentiation",1]
["regulation of NAD(P)H oxidase activity",1]
["regulation of nervous system development",5]
["regulation of neurogenesis",4]
["regulation of neuromuscular junction development",1]
["regulation of neuron apoptotic process",2]
["regulation of neuron death",2]
["regulation of neuron differentiation",3]
["regulation of neuron migration",1]
["regulation of neuron projection development",3]
["regulation of neuronal synaptic plasticity",1]
["regulation of neurotransmitter levels",10]
["regulation of NIK/NF-kappaB signaling",1]
["regulation of nitrate assimilation",1]
["regulation of nitrogen compound metabolic process",248]
["regulation of nitrogen cycle metabolic process",1]
["regulation of nitrogen utilization",1]
["regulation of nodal signaling pathway",1]
["regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["regulation of non-canonical Wnt signaling pathway",2]
["regulation of Notch signaling pathway",1]
["regulation of nuclear cell cycle DNA replication",1]
["regulation of nuclear division",21]
["regulation of nuclease activity",1]
["regulation of nucleic acid-templated transcription",125]
["regulation of nucleobase-containing compound metabolic process",177]
["regulation of nucleobase-containing compound transport",2]
["regulation of nucleocytoplasmic transport",7]
["regulation of nucleotide biosynthetic process",3]
["regulation of nucleotide catabolic process",2]
["regulation of nucleotide metabolic process",3]
["regulation of nucleus size",1]
["regulation of nurse cell apoptotic process",1]
["regulation of odontogenesis",1]
["regulation of odontogenesis of dentin-containing tooth",1]
["regulation of olefin biosynthetic process",3]
["regulation of olefin metabolic process",3]
["regulation of oligodendrocyte differentiation",1]
["regulation of oogenesis",1]
["regulation of organ growth",1]
["regulation of organelle assembly",7]
["regulation of organelle organization",69]
["regulation of organic acid transport",1]
["regulation of ornithine metabolic process",1]
["regulation of osteoclast development",1]
["regulation of osteoclast differentiation",1]
["regulation of oviposition",1]
["regulation of oxidative phosphorylation",1]
["regulation of oxidative stress-induced cell death",1]
["regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["regulation of oxidative stress-induced neuron death",1]
["regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["regulation of oxidoreductase activity",4]
["regulation of pathway-restricted SMAD protein phosphorylation",1]
["regulation of peptidase activity",4]
["regulation of peptide secretion",2]
["regulation of peptide transport",12]
["regulation of peptidyl-lysine acetylation",4]
["regulation of peptidyl-serine phosphorylation",2]
["regulation of peptidyl-serine phosphorylation of STAT protein",1]
["regulation of peptidyl-threonine phosphorylation",3]
["regulation of peptidyl-tyrosine phosphorylation",2]
["regulation of peroxisome size",2]
["regulation of pH",7]
["regulation of phagosome maturation",1]
["regulation of phenylpropanoid metabolic process",3]
["regulation of phosphatase activity",9]
["regulation of phosphate metabolic process",47]
["regulation of phosphatidylinositol 3-kinase activity",1]
["regulation of phospholipase A2 activity",1]
["regulation of phospholipase activity",3]
["regulation of phospholipase C activity",1]
["regulation of phospholipid biosynthetic process",1]
["regulation of phospholipid metabolic process",2]
["regulation of phospholipid translocation",1]
["regulation of phospholipid transport",1]
["regulation of phosphoprotein phosphatase activity",8]
["regulation of phosphorelay signal transduction system",7]
["regulation of phosphorus metabolic process",47]
["regulation of phosphorylation",36]
["regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["regulation of photomorphogenesis",5]
["regulation of photoperiodism- flowering",7]
["regulation of photosynthesis",11]
["regulation of photosynthesis- light reaction",7]
["regulation of phytol biosynthetic process",1]
["regulation of pinocytosis",1]
["regulation of plant organ formation",7]
["regulation of plant organ morphogenesis",2]
["regulation of plant-type cell wall cellulose biosynthetic process",2]
["regulation of plant-type hypersensitive response",5]
["regulation of plasma membrane bounded cell projection assembly",3]
["regulation of plasma membrane bounded cell projection organization",6]
["regulation of podosome assembly",1]
["regulation of polysaccharide biosynthetic process",2]
["regulation of polysaccharide metabolic process",2]
["regulation of post-embryonic development",51]
["regulation of post-embryonic root development",5]
["regulation of postsynaptic membrane potential",1]
["regulation of posttranscriptional gene silencing",7]
["regulation of potassium ion transmembrane transport",1]
["regulation of potassium ion transmembrane transporter activity",1]
["regulation of potassium ion transport",1]
["regulation of pri-miRNA transcription by RNA polymerase II",1]
["regulation of primary metabolic process",257]
["regulation of pro-B cell differentiation",1]
["regulation of production of miRNAs involved in gene silencing by miRNA",1]
["regulation of production of siRNA involved in RNA interference",2]
["regulation of production of small RNA involved in gene silencing by RNA",3]
["regulation of programmed cell death",25]
["regulation of proteasomal protein catabolic process",8]
["regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["regulation of protein acetylation",4]
["regulation of protein catabolic process",12]
["regulation of protein complex stability",1]
["regulation of protein deacetylation",1]
["regulation of protein dephosphorylation",8]
["regulation of protein depolymerization",1]
["regulation of protein deubiquitination",1]
["regulation of protein exit from endoplasmic reticulum",3]
["regulation of protein export from nucleus",3]
["regulation of protein geranylgeranylation",2]
["regulation of protein glycosylation",1]
["regulation of protein glycosylation in Golgi",1]
["regulation of protein import",3]
["regulation of protein import into chloroplast stroma",1]
["regulation of protein import into nucleus",2]
["regulation of protein K63-linked deubiquitination",1]
["regulation of protein K63-linked ubiquitination",1]
["regulation of protein kinase activity",24]
["regulation of protein kinase B signaling",1]
["regulation of protein localization",14]
["regulation of protein localization to cell surface",2]
["regulation of protein localization to kinetochore",1]
["regulation of protein localization to nucleus",3]
["regulation of protein maturation",1]
["regulation of protein metabolic process",90]
["regulation of protein modification by small protein conjugation or removal",4]
["regulation of protein modification process",54]
["regulation of protein phosphorylation",32]
["regulation of protein polymerization",7]
["regulation of protein polyubiquitination",1]
["regulation of protein processing",1]
["regulation of protein secretion",2]
["regulation of protein serine/threonine kinase activity",14]
["regulation of protein stability",5]
["regulation of protein targeting",2]
["regulation of protein targeting to mitochondrion",1]
["regulation of protein transport",12]
["regulation of protein tyrosine kinase activity",1]
["regulation of protein ubiquitination",3]
["regulation of protein-containing complex assembly",18]
["regulation of protein-containing complex disassembly",4]
["regulation of proteolysis",15]
["regulation of proteolysis involved in cellular protein catabolic process",8]
["regulation of proton transport",1]
["regulation of pseudopodium assembly",1]
["regulation of purine nucleotide biosynthetic process",3]
["regulation of purine nucleotide metabolic process",3]
["regulation of radial pattern formation",1]
["regulation of Ras protein signal transduction",2]
["regulation of reactive oxygen species metabolic process",4]
["regulation of receptor internalization",3]
["regulation of receptor signaling pathway via JAK-STAT",2]
["regulation of receptor signaling pathway via STAT",2]
["regulation of receptor-mediated endocytosis",3]
["regulation of reciprocal meiotic recombination",2]
["regulation of red or far-red light signaling pathway",1]
["regulation of release of sequestered calcium ion into cytosol",1]
["regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum",1]
["regulation of reproductive process",48]
["regulation of response to alcohol",14]
["regulation of response to biotic stimulus",13]
["regulation of response to cytokine stimulus",1]
["regulation of response to DNA damage stimulus",9]
["regulation of response to drug",4]
["regulation of response to endoplasmic reticulum stress",3]
["regulation of response to external stimulus",16]
["regulation of response to extracellular stimulus",1]
["regulation of response to nutrient levels",1]
["regulation of response to osmotic stress",3]
["regulation of response to oxidative stress",4]
["regulation of response to reactive oxygen species",2]
["regulation of response to red or far red light",8]
["regulation of response to salt stress",3]
["regulation of response to stimulus",155]
["regulation of response to stress",70]
["regulation of response to water deprivation",5]
["regulation of response to wounding",1]
["regulation of ribonucleoprotein complex localization",1]
["regulation of ribosome biogenesis",2]
["regulation of RNA biosynthetic process",125]
["regulation of RNA export from nucleus",2]
["regulation of RNA interference",3]
["regulation of RNA metabolic process",143]
["regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["regulation of RNA splicing",7]
["regulation of RNA stability",8]
["regulation of root development",15]
["regulation of root meristem growth",8]
["regulation of root morphogenesis",1]
["regulation of rRNA processing",2]
["regulation of ruffle assembly",1]
["regulation of salicylic acid mediated signaling pathway",4]
["regulation of salicylic acid metabolic process",2]
["regulation of sarcomere organization",1]
["regulation of secondary metabolic process",5]
["regulation of secondary metabolite biosynthetic process",4]
["regulation of secondary shoot formation",5]
["regulation of secretion",4]
["regulation of secretion by cell",4]
["regulation of seed development",5]
["regulation of seed dormancy process",1]
["regulation of seed germination",9]
["regulation of seed growth",4]
["regulation of seed maturation",1]
["regulation of seedling development",11]
["regulation of septation initiation signaling",1]
["regulation of sequestering of calcium ion",1]
["regulation of sequestering of triglyceride",1]
["regulation of shade avoidance",1]
["regulation of shoot apical meristem development",1]
["regulation of shoot system development",32]
["regulation of shoot system morphogenesis",6]
["regulation of short-day photoperiodism- flowering",1]
["regulation of short-term neuronal synaptic plasticity",1]
["regulation of signal transduction",89]
["regulation of signal transduction by p53 class mediator",4]
["regulation of signaling",92]
["regulation of signaling receptor activity",2]
["regulation of sinapate ester biosynthetic process",1]
["regulation of single-species biofilm formation",1]
["regulation of sister chromatid cohesion",1]
["regulation of sister chromatid segregation",13]
["regulation of small GTPase mediated signal transduction",2]
["regulation of small molecule metabolic process",16]
["regulation of smooth muscle cell proliferation",1]
["regulation of smooth muscle contraction",1]
["regulation of smoothened signaling pathway",2]
["regulation of SNARE complex assembly",3]
["regulation of sodium ion transport",1]
["regulation of sorocarp development",2]
["regulation of sorocarp spore cell differentiation",1]
["regulation of spindle checkpoint",3]
["regulation of sporulation",1]
["regulation of sprouting angiogenesis",1]
["regulation of stem cell differentiation",2]
["regulation of stem cell division",4]
["regulation of stem cell population maintenance",2]
["regulation of sterigmatocystin biosynthetic process",1]
["regulation of steroid biosynthetic process",2]
["regulation of steroid metabolic process",2]
["regulation of sterol biosynthetic process",2]
["regulation of stomatal closure",4]
["regulation of stomatal movement",16]
["regulation of stress-activated MAPK cascade",2]
["regulation of stress-activated protein kinase signaling cascade",2]
["regulation of striated muscle cell apoptotic process",1]
["regulation of striated muscle cell differentiation",2]
["regulation of striated muscle contraction",1]
["regulation of striated muscle tissue development",1]
["regulation of sulfur amino acid metabolic process",3]
["regulation of sulfur metabolic process",4]
["regulation of supramolecular fiber organization",7]
["regulation of synapse assembly",1]
["regulation of synapse organization",1]
["regulation of synapse structure or activity",1]
["regulation of synaptic assembly at neuromuscular junction",1]
["regulation of synaptic plasticity",1]
["regulation of synaptic transmission- glutamatergic",2]
["regulation of synaptic vesicle cycle",1]
["regulation of synaptic vesicle recycling",1]
["regulation of syncytium formation by plasma membrane fusion",1]
["regulation of syringal lignin biosynthetic process",1]
["regulation of system process",2]
["regulation of systemic acquired resistance",4]
["regulation of telomerase activity",2]
["regulation of telomerase RNA localization to Cajal body",2]
["regulation of telomere maintenance",6]
["regulation of telomere maintenance via telomerase",5]
["regulation of telomere maintenance via telomere lengthening",5]
["regulation of tetrapyrrole biosynthetic process",5]
["regulation of tetrapyrrole catabolic process",1]
["regulation of tetrapyrrole metabolic process",6]
["regulation of timing of meristematic phase transition",7]
["regulation of timing of plant organ formation",1]
["regulation of timing of transition from vegetative to reproductive phase",7]
["regulation of tocopherol cyclase activity",1]
["regulation of TOR signaling",2]
["regulation of TORC1 signaling",1]
["regulation of trans-synaptic signaling",3]
["regulation of transcription by RNA polymerase I",1]
["regulation of transcription by RNA polymerase II",34]
["regulation of transcription by RNA polymerase III",1]
["regulation of transcription elongation from RNA polymerase II promoter",3]
["regulation of transcription from RNA polymerase II promoter in response to stress",1]
["regulation of transcription initiation from RNA polymerase II promoter",1]
["regulation of transcription involved in G1/S transition of mitotic cell cycle",1]
["regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["regulation of transcription regulatory region DNA binding",1]
["regulation of transcription- DNA-templated",123]
["regulation of transferase activity",31]
["regulation of transforming growth factor beta receptor signaling pathway",1]
["regulation of translation",19]
["regulation of translational elongation",3]
["regulation of translational initiation",2]
["regulation of translational termination",1]
["regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",4]
["regulation of transmembrane transport",5]
["regulation of transmembrane transporter activity",3]
["regulation of transport",45]
["regulation of transporter activity",3]
["regulation of trichome morphogenesis",1]
["regulation of triglyceride catabolic process",1]
["regulation of triglyceride metabolic process",1]
["regulation of tryptophan metabolic process",1]
["regulation of tumor necrosis factor production",1]
["regulation of tumor necrosis factor superfamily cytokine production",1]
["regulation of tumor necrosis factor-mediated signaling pathway",1]
["regulation of tyrosine phosphorylation of STAT protein",1]
["regulation of ubiquitin-dependent protein catabolic process",7]
["regulation of ubiquitin-protein transferase activity",1]
["regulation of ubiquitin-specific protease activity",1]
["regulation of unidimensional cell growth",3]
["regulation of urease activity",2]
["regulation of vacuolar transport",1]
["regulation of vacuole fusion- non-autophagic",2]
["regulation of vacuole organization",5]
["regulation of vasculature development",2]
["regulation of vegetative phase change",1]
["regulation of vernalization response",2]
["regulation of vesicle fusion",10]
["regulation of vesicle-mediated transport",20]
["regulation of viral genome replication",1]
["regulation of viral life cycle",1]
["regulation of viral process",3]
["regulation of vitamin E biosynthetic process",1]
["regulation of vitamin metabolic process",2]
["regulation of Wnt signaling pathway",7]
["regulation of Wnt signaling pathway- planar cell polarity pathway",1]
["regulation of wound healing",1]
["removal of superoxide radicals",1]
["renal system development",1]
["replication fork",16]
["replication fork processing",2]
["replication fork protection",1]
["replication fork protection complex",2]
["replication-born double-strand break repair via sister chromatid exchange",1]
["replisome",3]
["reproduction",229]
["reproductive behavior",1]
["reproductive fruiting body development",1]
["reproductive process",226]
["reproductive shoot system development",43]
["reproductive structure development",158]
["reproductive system development",158]
["rescue of stalled ribosome",1]
["resolution of meiotic recombination intermediates",6]
["resolution of recombination intermediates",1]
["respirasome",8]
["respiratory chain complex",8]
["respiratory chain complex I",6]
["respiratory chain complex II",1]
["respiratory chain complex III",1]
["respiratory chain complex IV assembly",1]
["respiratory electron transport chain",7]
["respiratory system development",4]
["respiratory tube development",2]
["response to abiotic stimulus",292]
["response to abscisic acid",63]
["response to absence of light",8]
["response to acetate",1]
["response to acid chemical",131]
["response to activity",1]
["response to alcohol",64]
["response to aluminum ion",2]
["response to amino acid",4]
["response to amino acid starvation",3]
["response to ammonium ion",1]
["response to anoxia",2]
["response to antibiotic",40]
["response to antineoplastic agent",1]
["response to arsenic-containing substance",4]
["response to ATP",1]
["response to auxin",32]
["response to bacterium",61]
["response to biotic stimulus",121]
["response to biotin",1]
["response to blue light",16]
["response to boron-containing substance",1]
["response to brassinosteroid",8]
["response to brefeldin A",1]
["response to bronchodilator",2]
["response to cadmium ion",64]
["response to calcium ion",3]
["response to cAMP",1]
["response to carbohydrate",33]
["response to cation stress",2]
["response to chemical",370]
["response to chitin",7]
["response to cobalt ion",1]
["response to cold",55]
["response to copper ion",2]
["response to copper ion starvation",1]
["response to curcumin",1]
["response to cycloheximide",1]
["response to cytokine",3]
["response to cytokinin",38]
["response to decreased oxygen levels",17]
["response to defenses of other organism",3]
["response to desiccation",2]
["response to disaccharide",18]
["response to drug",76]
["response to dsRNA",8]
["response to endogenous stimulus",171]
["response to endoplasmic reticulum stress",30]
["response to estrogen",2]
["response to ether",1]
["response to ethylene",26]
["response to external biotic stimulus",120]
["response to external stimulus",195]
["response to extracellular stimulus",63]
["response to far red light",9]
["response to flooding",1]
["response to fluid shear stress",1]
["response to freezing",4]
["response to fructose",5]
["response to fungicide",1]
["response to fungus",42]
["response to gamma radiation",4]
["response to gibberellin",7]
["response to glucose",9]
["response to gravity",11]
["response to growth factor",2]
["response to heat",32]
["response to herbivore",1]
["response to hexose",13]
["response to high light intensity",17]
["response to hormone",164]
["response to host",3]
["response to host defenses",3]
["response to host immune response",6]
["response to humidity",1]
["response to hydrogen peroxide",11]
["response to hypoxia",15]
["response to immobilization stress",1]
["response to indolebutyric acid",3]
["response to inorganic substance",144]
["response to insect",5]
["response to insulin",2]
["response to interferon-gamma",2]
["response to interleukin-1",1]
["response to ionizing radiation",11]
["response to iron ion",11]
["response to iron ion starvation",4]
["response to jasmonic acid",24]
["response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance",2]
["response to karrikin",15]
["response to ketone",2]
["response to leucine",1]
["response to light intensity",28]
["response to light stimulus",106]
["response to lipid",74]
["response to lipopolysaccharide",3]
["response to lithium ion",1]
["response to low fluence blue light stimulus by blue low-fluence system",3]
["response to low light intensity stimulus",4]
["response to magnesium ion",1]
["response to magnetism",1]
["response to maltose",1]
["response to manganese ion",1]
["response to mechanical stimulus",3]
["response to metal ion",86]
["response to microbial phytotoxin",1]
["response to misfolded protein",4]
["response to mitochondrial depolarisation",1]
["response to molecule of bacterial origin",7]
["response to molecule of fungal origin",3]
["response to monosaccharide",13]
["response to nematode",19]
["response to nerve growth factor",1]
["response to nitrate",5]
["response to nitric oxide",2]
["response to nitrogen compound",51]
["response to nitrosative stress",1]
["response to nutrient",9]
["response to nutrient levels",58]
["response to oomycetes",3]
["response to organic cyclic compound",45]
["response to organic substance",227]
["response to organonitrogen compound",35]
["response to organophosphorus",1]
["response to osmotic stress",98]
["response to other organism",120]
["response to oxidative stress",70]
["response to oxygen levels",17]
["response to oxygen radical",3]
["response to oxygen-containing compound",190]
["response to ozone",6]
["response to peptide",3]
["response to peptide hormone",3]
["response to peptidoglycan",1]
["response to pheromone",1]
["response to pheromone triggering conjugation with cellular fusion",1]
["response to photooxidative stress",1]
["response to purine-containing compound",1]
["response to radiation",117]
["response to reactive oxygen species",31]
["response to red light",9]
["response to red or far red light",25]
["response to redox state",2]
["response to salicylic acid",20]
["response to salt",1]
["response to salt stress",85]
["response to silver ion",1]
["response to singlet oxygen",4]
["response to starvation",46]
["response to steroid hormone",5]
["response to stimulus",714]
["response to stress",455]
["response to strigolactone",1]
["response to sucrose",18]
["response to superoxide",1]
["response to symbiont",5]
["response to symbiotic bacterium",1]
["response to symbiotic fungus",3]
["response to temperature stimulus",87]
["response to topologically incorrect protein",11]
["response to toxic substance",28]
["response to transforming growth factor beta",1]
["response to trichostatin A",1]
["response to tumor necrosis factor",1]
["response to unfolded protein",8]
["response to UV",26]
["response to UV-A",2]
["response to UV-B",13]
["response to UV-C",3]
["response to virus",7]
["response to vitamin",3]
["response to vitamin B1",1]
["response to vitamin D",1]
["response to water",38]
["response to water deprivation",37]
["response to wounding",32]
["response to xenobiotic stimulus",1]
["response to zinc ion",8]
["reticulophagy",1]
["retrograde protein transport- ER to cytosol",2]
["retrograde transport- endosome to Golgi",8]
["retrograde transport- vesicle recycling within Golgi",1]
["retrograde vesicle-mediated transport- Golgi to endoplasmic reticulum",7]
["retromer complex",3]
["retromer complex binding",1]
["retromer- cargo-selective complex",1]
["rhamnogalacturonan I metabolic process",1]
["rhamnogalacturonan I side chain metabolic process",1]
["rhamnogalacturonan II biosynthetic process",1]
["rhamnogalacturonan II metabolic process",1]
["Rho protein signal transduction",1]
["rhythmic process",16]
["riboflavin biosynthetic process",4]
["riboflavin kinase activity",1]
["riboflavin metabolic process",4]
["riboflavin synthase activity",1]
["ribonuclease activity",16]
["ribonuclease H2 complex",1]
["ribonuclease MRP complex",1]
["ribonuclease P complex",1]
["ribonucleoprotein complex",110]
["ribonucleoprotein complex assembly",31]
["ribonucleoprotein complex binding",11]
["ribonucleoprotein complex biogenesis",90]
["ribonucleoprotein complex disassembly",2]
["ribonucleoprotein complex export from nucleus",17]
["ribonucleoprotein complex localization",17]
["ribonucleoprotein complex subunit organization",32]
["ribonucleoprotein granule",17]
["ribonucleoside binding",15]
["ribonucleoside biosynthetic process",7]
["ribonucleoside bisphosphate biosynthetic process",4]
["ribonucleoside bisphosphate catabolic process",1]
["ribonucleoside bisphosphate metabolic process",9]
["ribonucleoside catabolic process",1]
["ribonucleoside diphosphate biosynthetic process",1]
["ribonucleoside diphosphate metabolic process",10]
["ribonucleoside metabolic process",12]
["ribonucleoside monophosphate biosynthetic process",16]
["ribonucleoside monophosphate metabolic process",24]
["ribonucleoside triphosphate biosynthetic process",12]
["ribonucleoside triphosphate metabolic process",20]
["ribonucleotide binding",57]
["ribonucleotide biosynthetic process",26]
["ribonucleotide catabolic process",1]
["ribonucleotide metabolic process",39]
["ribose phosphate biosynthetic process",26]
["ribose phosphate diphosphokinase activity",1]
["ribose phosphate metabolic process",43]
["ribosomal large subunit assembly",9]
["ribosomal large subunit biogenesis",24]
["ribosomal large subunit export from nucleus",1]
["ribosomal protein import into nucleus",3]
["ribosomal small subunit assembly",2]
["ribosomal small subunit binding",1]
["ribosomal small subunit biogenesis",14]
["ribosomal subunit",16]
["ribosomal subunit export from nucleus",2]
["ribosome",28]
["ribosome assembly",14]
["ribosome binding",7]
["ribosome biogenesis",74]
["ribosome disassembly",2]
["ribosome localization",2]
["ribulose-1-5-bisphosphate carboxylase/oxygenase activator activity",1]
["ribulose-phosphate 3-epimerase activity",2]
["RNA (guanine-N7)-methylation",2]
["RNA 3' uridylation",2]
["RNA 3'-end processing",23]
["RNA 5'-end processing",3]
["RNA acetylation",1]
["RNA binding",142]
["RNA biosynthetic process",33]
["RNA cap binding",2]
["RNA cap binding complex",4]
["RNA capping",1]
["RNA catabolic process",33]
["RNA destabilization",1]
["RNA export from nucleus",19]
["RNA folding",1]
["RNA guanylyltransferase activity",1]
["RNA helicase activity",64]
["RNA interference",4]
["RNA localization",24]
["RNA metabolic process",245]
["RNA methylation",17]
["RNA methyltransferase activity",12]
["RNA modification",56]
["RNA N6-methyladenosine methyltransferase complex",2]
["RNA nuclear export complex",1]
["RNA phosphodiester bond hydrolysis",32]
["RNA phosphodiester bond hydrolysis- endonucleolytic",13]
["RNA phosphodiester bond hydrolysis- exonucleolytic",10]
["RNA polyadenylation",10]
["RNA polymerase activity",2]
["RNA polymerase binding",6]
["RNA polymerase complex",20]
["RNA polymerase core enzyme binding",3]
["RNA polymerase I complex",1]
["RNA polymerase II C-terminal domain binding",1]
["RNA polymerase II C-terminal domain phosphoserine binding",1]
["RNA polymerase II cis-regulatory region sequence-specific DNA binding",2]
["RNA polymerase II complex binding",3]
["RNA polymerase II CTD heptapeptide repeat phosphatase activity",1]
["RNA polymerase II general transcription initiation factor binding",1]
["RNA polymerase II preinitiation complex assembly",1]
["RNA polymerase II transcription regulator complex",12]
["RNA polymerase II transcription regulatory region sequence-specific DNA binding",8]
["RNA polymerase II transcription repressor complex",1]
["RNA polymerase II- core complex",2]
["RNA polymerase II- holoenzyme",15]
["RNA polymerase II-specific DNA-binding transcription factor binding",9]
["RNA polymerase III complex",1]
["RNA polymerase III transcription regulator complex",1]
["RNA polymerase III transcription regulatory region sequence-specific DNA binding",1]
["RNA polymerase III type 3 promoter sequence-specific DNA binding",1]
["RNA polymerase IV complex",1]
["RNA polymerase V complex",1]
["RNA processing",147]
["RNA repair",1]
["RNA secondary structure unwinding",23]
["RNA splicing",42]
["RNA splicing- via endonucleolytic cleavage and ligation",2]
["RNA splicing- via transesterification reactions",35]
["RNA splicing- via transesterification reactions with bulged adenosine as nucleophile",35]
["RNA stabilization",3]
["RNA stem-loop binding",3]
["RNA surveillance",8]
["RNA transport",21]
["RNA uridylyltransferase activity",3]
["RNA-dependent DNA biosynthetic process",4]
["RNA-DNA hybrid ribonuclease activity",1]
["roof of mouth development",1]
["root cap development",2]
["root development",84]
["root epidermal cell differentiation",21]
["root hair",2]
["root hair cell development",14]
["root hair cell differentiation",17]
["root hair cell tip growth",2]
["root hair elongation",9]
["root hair initiation",1]
["root hair tip",1]
["root meristem growth",3]
["root meristem specification",2]
["root morphogenesis",49]
["root system development",84]
["rough endoplasmic reticulum",2]
["rough endoplasmic reticulum membrane",1]
["rRNA (adenine-N6-)-methyltransferase activity",1]
["rRNA (adenine-N6-N6-)-dimethyltransferase activity",1]
["rRNA (adenine) methyltransferase activity",2]
["rRNA (cytosine-C5-)-methyltransferase activity",2]
["rRNA (cytosine-N4-)-methyltransferase activity",1]
["rRNA (cytosine) methyltransferase activity",3]
["rRNA (guanine-N7)-methylation",1]
["rRNA (guanine) methyltransferase activity",2]
["rRNA (pseudouridine) methyltransferase activity",1]
["rRNA (uridine-2'-O-)-methyltransferase activity",1]
["rRNA (uridine) methyltransferase activity",1]
["rRNA 2'-O-methylation",1]
["rRNA 3'-end processing",5]
["rRNA 5'-end processing",2]
["rRNA acetylation",1]
["rRNA acetylation involved in maturation of SSU-rRNA",1]
["rRNA base methylation",6]
["rRNA binding",7]
["rRNA catabolic process",8]
["rRNA cytidine N-acetyltransferase activity",1]
["rRNA export from nucleus",1]
["rRNA metabolic process",61]
["rRNA methylation",10]
["rRNA methyltransferase activity",8]
["rRNA modification",18]
["rRNA processing",60]
["rRNA pseudouridine synthesis",6]
["rRNA transport",1]
["rRNA-containing ribonucleoprotein complex export from nucleus",3]
["RSC-type complex",1]
["ruffle",1]
["ruffle membrane",1]
["S-acyltransferase activity",1]
["S-adenosyl-L-methionine binding",3]
["S-adenosylhomocysteine metabolic process",1]
["S-adenosylmethionine catabolic process",1]
["S-adenosylmethionine metabolic process",5]
["S-adenosylmethionine-dependent methyltransferase activity",44]
["S-formylglutathione hydrolase activity",1]
["S-glycoside biosynthetic process",3]
["S-glycoside catabolic process",3]
["S-glycoside metabolic process",6]
["S-methyltransferase activity",1]
["saccharopine dehydrogenase activity",1]
["SAGA complex",1]
["SAGA-type complex",1]
["salicylic acid catabolic process",1]
["salicylic acid mediated signaling pathway",9]
["salicylic acid metabolic process",1]
["salivary gland development",1]
["sarcolemma",1]
["sarcomere",1]
["SCAR complex",2]
["SCF ubiquitin ligase complex",6]
["SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",3]
["Schwann cell differentiation",1]
["Schwann cell proliferation",1]
["Sec62/Sec63 complex",1]
["second-messenger-mediated signaling",6]
["secondary active transmembrane transporter activity",28]
["secondary alcohol biosynthetic process",1]
["secondary alcohol metabolic process",1]
["secondary cell wall",2]
["secondary metabolic process",27]
["secondary metabolite biosynthetic process",20]
["secondary plasmodesma",1]
["secondary shoot formation",5]
["secretion",20]
["secretion by cell",19]
["secretory granule",5]
["secretory granule lumen",1]
["secretory granule maturation",1]
["secretory granule membrane",3]
["secretory granule organization",2]
["secretory vesicle",6]
["sedoheptulose-bisphosphatase activity",1]
["seed coat development",7]
["seed development",99]
["seed dormancy process",2]
["seed germination",10]
["seed maturation",4]
["seed oilbody biogenesis",1]
["seedling development",13]
["selective autophagy",3]
["selenium compound metabolic process",3]
["sensory organ development",3]
["sensory organ morphogenesis",2]
["sensory perception",2]
["sensory perception of light stimulus",1]
["sensory perception of mechanical stimulus",1]
["sensory perception of sound",1]
["sepal development",2]
["sepal formation",1]
["sepal morphogenesis",1]
["sepal vascular tissue pattern formation",1]
["septum digestion after cytokinesis",1]
["sequence-specific DNA binding",32]
["sequence-specific double-stranded DNA binding",13]
["sequence-specific single stranded DNA binding",1]
["serine C-palmitoyltransferase activity",1]
["serine C-palmitoyltransferase complex",2]
["serine family amino acid biosynthetic process",8]
["serine family amino acid catabolic process",2]
["serine family amino acid metabolic process",10]
["serine hydrolase activity",9]
["serine O-acetyltransferase activity",2]
["serine O-acyltransferase activity",2]
["serine racemase activity",1]
["serine transmembrane transporter activity",1]
["serine transport",1]
["serine-glyoxylate transaminase activity",1]
["serine-pyruvate transaminase activity",1]
["serine-tRNA ligase activity",1]
["serine-type aminopeptidase activity",1]
["serine-type carboxypeptidase activity",5]
["serine-type endopeptidase activity",3]
["serine-type exopeptidase activity",6]
["serine-type peptidase activity",9]
["serine/threonine protein kinase complex",8]
["seryl-tRNA aminoacylation",1]
["sesquiterpenoid biosynthetic process",3]
["sesquiterpenoid metabolic process",3]
["Set1C/COMPASS complex",2]
["sex differentiation",2]
["sexual reproduction",28]
["sexual sporulation",2]
["SH2 domain binding",1]
["shade avoidance",3]
["shikimate 3-dehydrogenase (NADP+) activity",1]
["shikimate metabolic process",1]
["shoot apical meristem development",1]
["shoot axis formation",5]
["shoot system development",102]
["shoot system morphogenesis",26]
["short-chain carboxylesterase activity",1]
["short-chain fatty acid metabolic process",1]
["short-day photoperiodism",1]
["short-day photoperiodism- flowering",1]
["sialic acid transmembrane transporter activity",4]
["sialic acid transport",4]
["side of membrane",10]
["sieve element differentiation",1]
["sieve plate",1]
["sigma factor activity",2]
["signal peptide processing",1]
["signal recognition particle",1]
["signal recognition particle binding",1]
["signal recognition particle- endoplasmic reticulum targeting",1]
["signal release",2]
["signal release from synapse",2]
["signal sequence binding",8]
["signal transduction",155]
["signal transduction by p53 class mediator",1]
["signal transduction in response to DNA damage",3]
["signaling",148]
["signaling receptor activity",23]
["signaling receptor binding",17]
["signaling receptor complex adaptor activity",1]
["signaling receptor regulator activity",1]
["silent mating-type cassette heterochromatin assembly",1]
["simple leaf morphogenesis",2]
["Sin3 complex",1]
["Sin3-type complex",1]
["single base insertion or deletion binding",1]
["single fertilization",1]
["single strand break repair",1]
["single-stranded DNA binding",20]
["single-stranded DNA endodeoxyribonuclease activity",2]
["single-stranded RNA binding",14]
["single-stranded telomeric DNA binding",1]
["singlet oxygen-mediated programmed cell death",3]
["sister chromatid biorientation",1]
["sister chromatid cohesion",6]
["sister chromatid segregation",20]
["site of DNA damage",3]
["site of double-strand break",3]
["site of polarized growth",5]
["site-specific DNA-methyltransferase (adenine-specific) activity",1]
["skeletal system development",2]
["skeletal system morphogenesis",1]
["Ski complex",1]
["skin development",2]
["skin epidermis development",2]
["skotomorphogenesis",2]
["Sm-like protein family complex",15]
["small GTPase binding",51]
["small GTPase mediated signal transduction",3]
["small molecule binding",90]
["small molecule biosynthetic process",129]
["small molecule catabolic process",50]
["small molecule metabolic process",298]
["small nuclear ribonucleoprotein complex",13]
["small nucleolar ribonucleoprotein complex assembly",1]
["small ribosomal subunit",8]
["small ribosomal subunit rRNA binding",1]
["small RNA loading onto RISC",2]
["small-subunit processome",8]
["SMC loading complex",1]
["SMN complex",1]
["SMN-Sm protein complex",1]
["smoothened signaling pathway",1]
["SNAP receptor activity",4]
["SNARE binding",8]
["SNARE complex",7]
["sno(s)RNA 3'-end processing",5]
["sno(s)RNA metabolic process",8]
["sno(s)RNA polyadenylation",2]
["sno(s)RNA processing",6]
["sno(s)RNA-containing ribonucleoprotein complex",6]
["snoRNA binding",6]
["snoRNA guided rRNA pseudouridine synthesis",1]
["snoRNA release from pre-rRNA",1]
["snoRNA splicing",1]
["snRNA (adenine-N6)-methylation",1]
["snRNA 3'-end processing",4]
["snRNA binding",4]
["snRNA metabolic process",8]
["snRNA modification",3]
["snRNA processing",5]
["snRNA pseudouridine synthesis",2]
["snRNA stem-loop binding",1]
["socially cooperative development",5]
["sodium ion export across plasma membrane",1]
["sodium ion homeostasis",1]
["sodium ion import across plasma membrane",1]
["sodium ion transmembrane transport",5]
["sodium ion transmembrane transporter activity",5]
["sodium ion transport",6]
["soluble NSF attachment protein activity",1]
["solute:cation antiporter activity",6]
["solute:cation symporter activity",5]
["solute:proton antiporter activity",3]
["solute:proton symporter activity",5]
["somatic diversification of immune receptors",1]
["somatic diversification of immune receptors via somatic mutation",1]
["somatic diversification of immunoglobulins",1]
["somatic hypermutation of immunoglobulin genes",1]
["somatic stem cell division",1]
["somatodendritic compartment",4]
["sorocarp development",5]
["sorocarp morphogenesis",1]
["spanning component of membrane",1]
["spanning component of plasma membrane",1]
["specification of axis polarity",1]
["specification of floral organ identity",3]
["specification of floral organ number",1]
["specification of plant organ identity",3]
["specification of plant organ number",1]
["specification of symmetry",3]
["sperm axoneme assembly",1]
["sperm chromatin condensation",1]
["sperm motility",1]
["spermatid development",3]
["spermatid differentiation",3]
["spermatid nucleus differentiation",2]
["spermatid nucleus elongation",1]
["spermatogenesis",4]
["spermatogenesis- exchange of chromosomal proteins",1]
["spermine synthase activity",1]
["sphinganine biosynthetic process",2]
["sphinganine kinase activity",1]
["sphinganine metabolic process",2]
["sphingoid biosynthetic process",4]
["sphingoid catabolic process",1]
["sphingoid metabolic process",6]
["sphingolipid alpha-glucuronosyltransferase activity",1]
["sphingolipid binding",1]
["sphingolipid biosynthetic process",8]
["sphingolipid catabolic process",3]
["sphingolipid mediated signaling pathway",2]
["sphingolipid metabolic process",15]
["sphingolipid transporter activity",2]
["sphingomyelin biosynthetic process",2]
["sphingomyelin metabolic process",2]
["sphingomyelin transfer activity",1]
["sphingosine biosynthetic process",4]
["sphingosine metabolic process",4]
["sphingosine N-acyltransferase activity",1]
["sphingosine-1-phosphate phosphatase activity",1]
["sphingosine-1-phosphate receptor activity",1]
["sphingosine-1-phosphate receptor signaling pathway",3]
["spinal cord development",2]
["spinal cord dorsal/ventral patterning",1]
["spinal cord motor neuron differentiation",1]
["spinal cord patterning",1]
["spindle",21]
["spindle assembly",8]
["spindle assembly checkpoint signaling",5]
["spindle assembly involved in male meiosis",1]
["spindle assembly involved in meiosis",1]
["spindle checkpoint signaling",5]
["spindle disassembly",2]
["spindle localization",1]
["spindle matrix",1]
["spindle microtubule",8]
["spindle midzone",4]
["spindle organization",16]
["spindle pole",5]
["spindle pole body",2]
["spindle pole body duplication",1]
["spindle pole body organization",1]
["spleen development",1]
["spliceosomal complex",30]
["spliceosomal complex assembly",5]
["spliceosomal conformational changes to generate catalytic conformation",2]
["spliceosomal snRNP assembly",1]
["spliceosomal snRNP complex",12]
["spliceosomal tri-snRNP complex",3]
["spore germination",1]
["spore-bearing structure development",1]
["sporocarp development",1]
["sporocarp development involved in asexual reproduction",1]
["sporopollenin biosynthetic process",3]
["sporulation",4]
["sporulation resulting in formation of a cellular spore",1]
["SPOTS complex",1]
["squalene synthase activity",1]
["SRP-dependent cotranslational protein targeting to membrane",1]
["SRP-dependent cotranslational protein targeting to membrane- translocation",1]
["stabilization of membrane potential",1]
["stamen development",12]
["stamen filament development",2]
["stamen formation",1]
["stamen morphogenesis",1]
["starch biosynthetic process",6]
["starch catabolic process",9]
["starch grain",2]
["starch metabolic process",17]
["starch synthase activity",2]
["stem cell differentiation",1]
["stem cell division",1]
["stem cell population maintenance",13]
["stem cell proliferation",2]
["stem vascular tissue pattern formation",1]
["stereocilium bundle",1]
["sterigmatocystin biosynthetic process",1]
["sterigmatocystin metabolic process",1]
["steroid binding",2]
["steroid biosynthetic process",13]
["steroid hormone mediated signaling pathway",5]
["steroid metabolic process",14]
["steroid receptor RNA activator RNA binding",1]
["sterol 14-demethylase activity",1]
["sterol 24-C-methyltransferase activity",1]
["sterol binding",1]
["sterol biosynthetic process",10]
["sterol delta7 reductase activity",1]
["sterol desaturase activity",2]
["sterol homeostasis",1]
["sterol metabolic process",12]
["sterol transport",1]
["sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity",1]
["stomatal closure",6]
["stomatal complex development",5]
["stomatal complex formation",1]
["stomatal complex morphogenesis",4]
["stomatal complex patterning",1]
["stomatal lineage progression",1]
["stomatal movement",12]
["stomatal opening",1]
["storage vacuole",7]
["strand invasion",5]
["stress granule assembly",2]
["stress response to cadmium ion",1]
["stress response to metal ion",1]
["stress-activated protein kinase signaling cascade",6]
["striated muscle cell development",1]
["striated muscle cell differentiation",2]
["striated muscle tissue development",2]
["strigolactone biosynthetic process",2]
["strigolactone metabolic process",2]
["stromal side of plastid thylakoid membrane",2]
["stromule",12]
["structural constituent of cytoskeleton",6]
["structural constituent of nuclear pore",4]
["structural constituent of ribosome",18]
["structural molecule activity",36]
["suberin biosynthetic process",6]
["suberin network",1]
["succinate dehydrogenase activity",1]
["succinate dehydrogenase complex",1]
["succinate dehydrogenase complex (ubiquinone)",1]
["succinate metabolic process",3]
["succinate-CoA ligase (ADP-forming) activity",1]
["succinate-CoA ligase activity",1]
["succinate-semialdehyde dehydrogenase (NAD+) activity",1]
["succinyl-CoA metabolic process",1]
["sucrose biosynthetic process",3]
["sucrose catabolic process",2]
["sucrose metabolic process",7]
["sucrose transmembrane transporter activity",1]
["sucrose transport",2]
["sugar mediated signaling pathway",13]
["sugar transmembrane transporter activity",7]
["sugar-phosphatase activity",4]
["sulfate adenylyltransferase (ATP) activity",1]
["sulfate adenylyltransferase activity",1]
["sulfate assimilation",4]
["sulfate assimilation- phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)",2]
["sulfate binding",1]
["sulfate ion homeostasis",2]
["sulfate reduction",3]
["sulfate transmembrane transport",2]
["sulfate transmembrane transporter activity",2]
["sulfate transport",2]
["sulfide oxidation",1]
["sulfide oxidation- using siroheme sulfite reductase",1]
["sulfite reductase (ferredoxin) activity",1]
["sulfite reductase activity",1]
["sulfolipid biosynthetic process",1]
["sulfolipid metabolic process",1]
["sulfotransferase activity",2]
["sulfur amino acid biosynthetic process",7]
["sulfur amino acid catabolic process",2]
["sulfur amino acid metabolic process",12]
["sulfur amino acid transmembrane transporter activity",1]
["sulfur amino acid transport",1]
["sulfur compound binding",4]
["sulfur compound biosynthetic process",24]
["sulfur compound catabolic process",8]
["sulfur compound metabolic process",53]
["sulfur compound transmembrane transporter activity",4]
["sulfur compound transport",6]
["sulfur dioxygenase activity",1]
["sulfurtransferase activity",7]
["SUMO activating enzyme activity",1]
["SUMO binding",1]
["SUMO ligase activity",2]
["SUMO transferase activity",3]
["superoxide dismutase activity",1]
["superoxide metabolic process",1]
["supramolecular complex",21]
["supramolecular fiber",18]
["supramolecular fiber organization",21]
["supramolecular polymer",18]
["suspensor development",1]
["SWI/SNF complex",4]
["SWI/SNF superfamily-type complex",9]
["Swr1 complex",1]
["symplast",121]
["symporter activity",6]
["synapse",8]
["synapse assembly",1]
["synapse organization",1]
["synaptic assembly at neuromuscular junction",1]
["synaptic membrane",3]
["synaptic signaling",2]
["synaptic vesicle",2]
["synaptic vesicle cycle",2]
["synaptic vesicle endocytosis",2]
["synaptic vesicle membrane",1]
["synaptic vesicle recycling",2]
["synaptonemal complex",2]
["synaptonemal structure",2]
["synergid death",1]
["syntaxin binding",3]
["system development",288]
["system process",7]
["systemic acquired resistance",10]
["systemic acquired resistance- salicylic acid mediated signaling pathway",5]
["T cell receptor signaling pathway",2]
["T-tubule",1]
["tail-anchored membrane protein insertion into ER membrane",2]
["TAT protein transport complex",1]
["taxis",10]
["TBP-class protein binding",1]
["telencephalon development",4]
["telomerase holoenzyme complex",1]
["telomerase holoenzyme complex assembly",1]
["telomerase inhibitor activity",1]
["telomerase RNA binding",2]
["telomerase RNA stabilization",1]
["telomere cap complex",1]
["telomere capping",3]
["telomere localization",1]
["telomere maintenance",12]
["telomere maintenance in response to DNA damage",3]
["telomere maintenance via recombination",1]
["telomere maintenance via semi-conservative replication",2]
["telomere maintenance via telomerase",4]
["telomere maintenance via telomere lengthening",4]
["telomere organization",12]
["telomere tethering at nuclear periphery",1]
["telomeric DNA binding",6]
["telomeric loop formation",1]
["temperature compensation of the circadian clock",1]
["terminal bouton",1]
["termination of RNA polymerase II transcription",3]
["terpene biosynthetic process",2]
["terpene catabolic process",2]
["terpene metabolic process",4]
["terpenoid biosynthetic process",21]
["terpenoid biosynthetic process- mevalonate-independent",1]
["terpenoid catabolic process",1]
["terpenoid metabolic process",28]
["terpenoid transport",1]
["tertiary alcohol biosynthetic process",1]
["tertiary alcohol metabolic process",1]
["tetrahydrobiopterin biosynthetic process",1]
["tetrahydrobiopterin metabolic process",1]
["tetrahydrofolate biosynthetic process",1]
["tetrahydrofolate metabolic process",2]
["tetrahydrofolylpolyglutamate biosynthetic process",2]
["tetrahydrofolylpolyglutamate metabolic process",2]
["tetrahydrofolylpolyglutamate synthase activity",2]
["tetraketide alpha-pyrone synthase activity",1]
["tetrapyrrole binding",7]
["tetrapyrrole biosynthetic process",15]
["tetrapyrrole catabolic process",4]
["tetrapyrrole metabolic process",20]
["tetraterpenoid biosynthetic process",10]
["tetraterpenoid catabolic process",1]
["tetraterpenoid metabolic process",15]
["TFIIB-class transcription factor binding",1]
["thermospermine synthase activity",1]
["thiamine biosynthetic process",4]
["thiamine diphosphate biosynthetic process",1]
["thiamine diphosphate metabolic process",1]
["thiamine diphosphokinase activity",1]
["thiamine metabolic process",5]
["thiamine salvage",1]
["thiamine-containing compound biosynthetic process",4]
["thiamine-containing compound metabolic process",5]
["thiamine-phosphate diphosphorylase activity",1]
["thiazole biosynthetic process",1]
["thiazole metabolic process",1]
["thioester biosynthetic process",3]
["thioester metabolic process",7]
["thiol-dependent deubiquitinase",4]
["thiolester hydrolase activity",4]
["thioredoxin-disulfide reductase activity",1]
["thiosulfate sulfurtransferase activity",1]
["THO complex",7]
["THO complex part of transcription export complex",1]
["threonine racemase activity",1]
["threonine-tRNA ligase activity",1]
["threonyl-tRNA aminoacylation",1]
["thylakoid",106]
["thylakoid light-harvesting complex",1]
["thylakoid lumen",17]
["thylakoid membrane",68]
["thylakoid membrane organization",12]
["thymidine kinase activity",1]
["thymidine metabolic process",1]
["thyroid hormone receptor binding",2]
["Tic complex",2]
["TIM23 mitochondrial import inner membrane translocase complex",4]
["tissue development",109]
["tissue homeostasis",1]
["tissue migration",1]
["tissue morphogenesis",5]
["tissue regeneration",1]
["tissue remodeling",1]
["Toc complex",1]
["TOC-TIC supercomplex I",2]
["tocopherol cyclase activity",1]
["tocopherol O-methyltransferase activity",1]
["tongue development",1]
["tongue morphogenesis",1]
["TOR complex",1]
["TOR signaling",3]
["TORC1 complex",1]
["toxin biosynthetic process",2]
["toxin catabolic process",1]
["toxin metabolic process",4]
["toxin transport",1]
["TPR domain binding",1]
["trachea development",1]
["tracheary element differentiation",2]
["trans-Golgi network",62]
["trans-Golgi network membrane",6]
["trans-Golgi network transport vesicle",3]
["trans-Golgi network transport vesicle membrane",1]
["trans-octaprenyltranstransferase activity",1]
["trans-synaptic signaling",2]
["transaminase activity",12]
["transcription by RNA polymerase I",1]
["transcription by RNA polymerase II",19]
["transcription by RNA polymerase III",1]
["transcription cis-regulatory region binding",20]
["transcription coactivator activity",6]
["transcription coregulator activity",13]
["transcription coregulator binding",2]
["transcription corepressor activity",6]
["transcription corepressor binding",2]
["transcription elongation factor complex",3]
["transcription elongation from RNA polymerase II promoter",3]
["transcription export complex",1]
["transcription export complex 2",1]
["transcription factor binding",14]
["transcription factor TFIID complex",2]
["transcription factor TFIIE complex",1]
["transcription factor TFIIH core complex",2]
["transcription factor TFIIH holo complex",4]
["transcription factor TFIIIB complex",1]
["transcription factor TFIIK complex",1]
["transcription initiation from RNA polymerase II promoter",5]
["transcription preinitiation complex assembly",1]
["transcription regulator activity",55]
["transcription regulator complex",27]
["transcription regulatory region nucleic acid binding",14]
["transcription repressor complex",9]
["transcription- DNA-templated",32]
["transcription-coupled nucleotide-excision repair",4]
["transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery",3]
["transcriptionally active chromatin",3]
["transcytosis",1]
["transferase activity",385]
["transferase activity- transferring alkyl or aryl (other than methyl) groups",24]
["transferase activity- transferring nitrogenous groups",12]
["transferase activity- transferring one-carbon groups",51]
["transferase activity- transferring phosphorus-containing groups",143]
["transferase activity- transferring sulphur-containing groups",10]
["transferase complex",92]
["transferase complex- transferring phosphorus-containing groups",28]
["transition metal ion binding",64]
["transition metal ion homeostasis",14]
["transition metal ion transmembrane transporter activity",11]
["transition metal ion transport",12]
["transketolase or transaldolase activity",3]
["translation",59]
["translation elongation factor activity",2]
["translation elongation factor binding",1]
["translation factor activity- RNA binding",12]
["translation initiation factor activity",4]
["translation initiation factor binding",4]
["translation preinitiation complex",2]
["translation regulator activity",1]
["translation reinitiation",1]
["translation release factor activity",5]
["translation release factor activity- codon nonspecific",1]
["translation release factor activity- codon specific",2]
["translation release factor complex",1]
["translation repressor activity",1]
["translation termination factor activity",5]
["translational elongation",3]
["translational initiation",12]
["translational termination",7]
["translesion synthesis",7]
["transmembrane receptor protein kinase activity",13]
["transmembrane receptor protein serine/threonine kinase activity",13]
["transmembrane receptor protein serine/threonine kinase binding",1]
["transmembrane receptor protein serine/threonine kinase signaling pathway",13]
["transmembrane receptor protein tyrosine kinase signaling pathway",1]
["transmembrane signaling receptor activity",17]
["transmembrane transport",166]
["transmembrane transporter activity",141]
["transmembrane transporter complex",1]
["transpiration",1]
["transport",333]
["transport along microtubule",5]
["transport of virus",1]
["transport of virus in host- cell to cell",1]
["transport of virus in multicellular host",1]
["transport vesicle",8]
["transport vesicle membrane",5]
["transporter activity",173]
["transporter complex",2]
["transsulfuration",1]
["TRAPP complex",1]
["traversing start control point of mitotic cell cycle",1]
["trehalase activity",2]
["trehalose biosynthetic process",1]
["trehalose catabolic process",2]
["trehalose metabolic process",3]
["trehalose metabolism in response to stress",1]
["tricarboxylic acid cycle",6]
["tricarboxylic acid cycle enzyme complex",2]
["tricarboxylic acid metabolic process",7]
["tricarboxylic acid transmembrane transport",2]
["tricarboxylic acid transmembrane transporter activity",2]
["tricarboxylic acid transport",2]
["trichoblast differentiation",18]
["trichoblast maturation",17]
["trichome branching",5]
["trichome differentiation",17]
["trichome morphogenesis",14]
["trichome papilla formation",1]
["triglyceride biosynthetic process",3]
["triglyceride catabolic process",2]
["triglyceride homeostasis",1]
["triglyceride lipase activity",3]
["triglyceride metabolic process",5]
["triose-phosphate isomerase activity",1]
["tripeptide transmembrane transport",1]
["tripeptide transport",2]
["triphosphatase activity",1]
["trivalent inorganic anion homeostasis",2]
["tRNA (guanine-N7-)-methyltransferase activity",1]
["tRNA (guanine-N7)-methylation",1]
["tRNA (guanine) methyltransferase activity",1]
["tRNA (m1A) methyltransferase complex",2]
["tRNA 3'-end processing",1]
["tRNA 3'-trailer cleavage",1]
["tRNA 3'-trailer cleavage- endonucleolytic",1]
["tRNA 5'-end processing",1]
["tRNA 5'-leader removal",1]
["tRNA A64-2'-O-ribosylphosphate transferase activity",1]
["tRNA acetylation",1]
["tRNA aminoacylation",17]
["tRNA aminoacylation for mitochondrial protein translation",1]
["tRNA aminoacylation for protein translation",16]
["tRNA binding",7]
["tRNA catabolic process",3]
["tRNA dihydrouridine synthase activity",1]
["tRNA dihydrouridine synthesis",1]
["tRNA dimethylallyltransferase activity",1]
["tRNA export from nucleus",1]
["tRNA metabolic process",40]
["tRNA methylation",3]
["tRNA methylthiolation",1]
["tRNA methyltransferase activity",1]
["tRNA methyltransferase complex",3]
["tRNA modification",18]
["tRNA N-acetyltransferase activity",1]
["tRNA processing",21]
["tRNA pseudouridine synthesis",5]
["tRNA re-export from nucleus",1]
["tRNA splicing- via endonucleolytic cleavage and ligation",1]
["tRNA thio-modification",1]
["tRNA threonylcarbamoyladenosine metabolic process",3]
["tRNA threonylcarbamoyladenosine modification",2]
["tRNA transport",1]
["tRNA wobble base modification",3]
["tRNA wobble cytosine modification",1]
["tRNA wobble position uridine thiolation",1]
["tRNA wobble uridine modification",2]
["tRNA-containing ribonucleoprotein complex export from nucleus",1]
["tRNA-guanine transglycosylation",1]
["trophectodermal cell differentiation",1]
["tropism",9]
["tryptophan biosynthetic process",2]
["tryptophan catabolic process",2]
["tryptophan metabolic process",4]
["tryptophan synthase activity",1]
["tube development",9]
["tube formation",1]
["tube morphogenesis",4]
["tubular endosome",1]
["tubulin binding",20]
["tubulin complex assembly",2]
["tyrosine binding",1]
["tyrosine biosynthetic process",2]
["tyrosine catabolic process",2]
["tyrosine metabolic process",6]
["tyrosine-tRNA ligase activity",2]
["tyrosyl-DNA phosphodiesterase activity",1]
["tyrosyl-tRNA aminoacylation",1]
["U1 snRNA 3'-end processing",2]
["U1 snRNA binding",2]
["U1 snRNP",5]
["U11/U12 snRNP",1]
["U12-type spliceosomal complex",4]
["U2 snRNP",1]
["U2-type catalytic step 1 spliceosome",1]
["U2-type catalytic step 2 spliceosome",1]
["U2-type precatalytic spliceosome",1]
["U2-type prespliceosome",5]
["U2-type spliceosomal complex",11]
["U2AF complex",3]
["U3 snoRNA binding",1]
["U4 snRNA 3'-end processing",4]
["U4/U6 x U5 tri-snRNP complex",3]
["U5 snRNA 3'-end processing",2]
["U5 snRNP",3]
["U6 snRNA (adenine-(43)-N(6))-methyltransferase activity",1]
["U6 snRNA 3'-end binding",1]
["U6 snRNA binding",1]
["ubiquinol-cytochrome-c reductase activity",1]
["ubiquinone binding",1]
["ubiquinone biosynthetic process",4]
["ubiquinone biosynthetic process via 3-4-dihydroxy-5-polyprenylbenzoate",1]
["ubiquinone metabolic process",4]
["ubiquinone-6 biosynthetic process",1]
["ubiquinone-6 metabolic process",1]
["ubiquitin binding",6]
["ubiquitin conjugating enzyme binding",4]
["ubiquitin ligase complex",36]
["ubiquitin modification-dependent histone binding",1]
["ubiquitin protein ligase activity",26]
["ubiquitin protein ligase binding",18]
["ubiquitin-dependent ERAD pathway",10]
["ubiquitin-dependent protein binding",1]
["ubiquitin-dependent protein catabolic process",50]
["ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",4]
["ubiquitin-like modifier activating enzyme activity",4]
["ubiquitin-like protein binding",7]
["ubiquitin-like protein conjugating enzyme binding",4]
["ubiquitin-like protein ligase activity",28]
["ubiquitin-like protein ligase binding",18]
["ubiquitin-like protein transferase activity",47]
["ubiquitin-like protein-specific protease activity",4]
["ubiquitin-protein transferase activator activity",1]
["ubiquitin-protein transferase activity",43]
["ubiquitin-protein transferase regulator activity",1]
["ubiquitin-specific protease binding",3]
["ubiquitin-ubiquitin ligase activity",2]
["ubiquitination-like modification-dependent protein binding",1]
["UDP-arabinose 4-epimerase activity",1]
["UDP-D-galactose metabolic process",1]
["UDP-galactose transmembrane transport",5]
["UDP-galactose transmembrane transporter activity",5]
["UDP-galactosyltransferase activity",5]
["UDP-glucose metabolic process",4]
["UDP-glucose transmembrane transport",4]
["UDP-glucose transmembrane transporter activity",4]
["UDP-glucose:glycoprotein glucosyltransferase activity",1]
["UDP-glucosylation",1]
["UDP-glucosyltransferase activity",6]
["UDP-glucuronate decarboxylase activity",2]
["UDP-glucuronate metabolic process",1]
["UDP-glycosyltransferase activity",26]
["UDP-L-arabinose metabolic process",1]
["UDP-N-acetylgalactosamine diphosphorylase activity",1]
["UDP-N-acetylgalactosamine metabolic process",1]
["UDP-N-acetylgalactosamine transmembrane transport",1]
["UDP-N-acetylgalactosamine transmembrane transporter activity",1]
["UDP-N-acetylglucosamine biosynthetic process",2]
["UDP-N-acetylglucosamine diphosphorylase activity",1]
["UDP-N-acetylglucosamine metabolic process",2]
["UDP-N-acetylglucosamine transmembrane transport",1]
["UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity",1]
["UDP-xylosyltransferase activity",3]
["UFM1 hydrolase activity",1]
["UFM1 transferase activity",1]
["UMP biosynthetic process",3]
["UMP metabolic process",3]
["unfolded protein binding",12]
["unidimensional cell growth",37]
["unsaturated fatty acid biosynthetic process",3]
["unsaturated fatty acid metabolic process",5]
["uracil catabolic process",3]
["uracil metabolic process",3]
["urate oxidase activity",1]
["urea cycle",2]
["urea metabolic process",2]
["urea transmembrane transport",2]
["urea transmembrane transporter activity",2]
["urea transport",2]
["ureide catabolic process",4]
["ureide metabolic process",4]
["ureidoglycine aminohydrolase activity",1]
["ureidoglycolate hydrolase activity",1]
["uridine kinase activity",3]
["uridine-diphosphatase activity",1]
["uridylyltransferase activity",6]
["urogenital system development",2]
["uropod",1]
["uropod organization",1]
["uropod retraction",1]
["UTP-monosaccharide-1-phosphate uridylyltransferase activity",3]
["UTP:arabinose-1-phosphate uridylyltransferase activity",1]
["UTP:galactose-1-phosphate uridylyltransferase activity",1]
["UTP:glucose-1-phosphate uridylyltransferase activity",3]
["UTP:xylose-1-phosphate uridylyltransferase activity",1]
["UV-damage excision repair",3]
["vacuolar acidification",3]
["vacuolar lumen",5]
["vacuolar membrane",103]
["vacuolar protein processing",2]
["vacuolar proton-transporting V-type ATPase complex",2]
["vacuolar proton-transporting V-type ATPase- V1 domain",1]
["vacuolar transmembrane transport",2]
["vacuolar transport",32]
["vacuole",152]
["vacuole fusion",4]
["vacuole fusion- non-autophagic",4]
["vacuole inheritance",1]
["vacuole organization",25]
["vacuole-mitochondrion membrane contact site",1]
["valine biosynthetic process",2]
["valine metabolic process",2]
["valine-tRNA ligase activity",2]
["valyl-tRNA aminoacylation",2]
["vascular transport",2]
["vasculature development",3]
["vasculogenesis",1]
["VCP-NPL4-UFD1 AAA ATPase complex",1]
["VCP-NSFL1C complex",1]
["vegetative meristem growth",1]
["vegetative phase change",2]
["vegetative to reproductive phase transition of meristem",20]
["ventral spinal cord development",1]
["very long-chain fatty acid biosynthetic process",4]
["very long-chain fatty acid metabolic process",5]
["vesicle",117]
["vesicle budding from membrane",3]
["vesicle cargo loading",2]
["vesicle coat",5]
["vesicle docking",5]
["vesicle docking involved in exocytosis",2]
["vesicle fusion",9]
["vesicle fusion with Golgi apparatus",1]
["vesicle fusion with vacuole",1]
["vesicle localization",2]
["vesicle lumen",1]
["vesicle membrane",12]
["vesicle organization",17]
["vesicle targeting",2]
["vesicle tethering complex",14]
["vesicle-mediated transport",76]
["vesicle-mediated transport between endosomal compartments",3]
["vesicle-mediated transport in synapse",2]
["vesicle-mediated transport to the plasma membrane",7]
["violaxanthin de-epoxidase activity",1]
["viral gene expression",1]
["viral genome replication",2]
["viral life cycle",3]
["viral process",9]
["viral release from host cell",1]
["viral replication complex",1]
["viral RNA genome replication",1]
["viral translation",1]
["visual perception",1]
["vitamin B6 binding",7]
["vitamin B6 biosynthetic process",3]
["vitamin B6 metabolic process",3]
["vitamin binding",8]
["vitamin biosynthetic process",22]
["vitamin E biosynthetic process",4]
["vitamin E metabolic process",4]
["vitamin K biosynthetic process",1]
["vitamin K metabolic process",1]
["vitamin metabolic process",24]
["vitamin transmembrane transport",2]
["vitamin transmembrane transporter activity",2]
["vitamin transport",2]
["vitellogenesis",1]
["voltage-gated anion channel activity",3]
["voltage-gated cation channel activity",6]
["voltage-gated channel activity",9]
["voltage-gated chloride channel activity",2]
["voltage-gated ion channel activity",9]
["voltage-gated potassium channel activity",6]
["vulval development",1]
["water channel activity",1]
["water homeostasis",3]
["water transmembrane transporter activity",1]
["water transport",3]
["water-soluble vitamin biosynthetic process",17]
["water-soluble vitamin metabolic process",19]
["wax biosynthetic process",5]
["wax metabolic process",5]
["wing disc development",2]
["wing disc dorsal/ventral pattern formation",1]
["wing disc pattern formation",1]
["Wnt receptor catabolic process",1]
["Wnt signaling pathway",3]
["Wnt signaling pathway- planar cell polarity pathway",1]
["wound healing",6]
["xanthophyll biosynthetic process",3]
["xanthophyll catabolic process",1]
["xanthophyll cycle",2]
["xanthophyll metabolic process",7]
["xenobiotic transmembrane transporter activity",16]
["XPC complex",2]
["xylan 1-4-beta-xylosidase activity",1]
["xylan acetylation",1]
["xylan biosynthetic process",4]
["xylan catabolic process",1]
["xylan metabolic process",5]
["xylanase activity",1]
["xylem and phloem pattern formation",12]
["xylem development",4]
["xylem vessel member cell differentiation",1]
["xylogalacturonan metabolic process",1]
["xyloglucan biosynthetic process",1]
["xyloglucan metabolic process",2]
["xylosyltransferase activity",4]
["xylulokinase activity",1]
["xylulose metabolic process",1]
["Y-form DNA binding",1]
["yeast-form cell wall",1]
["Z disc",1]
["zeaxanthin epoxidase [overall] activity",1]
["zeaxanthin epoxidase activity",1]
["zinc ion binding",30]
["zinc ion homeostasis",3]
["zinc ion transmembrane transport",3]
["zinc ion transmembrane transporter activity",3]
["zinc ion transport",4]
["zygote asymmetric cell division",2]
["zygote asymmetric cytokinesis in embryo sac",2]
["zymogen binding",1]

{"sheet":"Table_S8","index":7,"n_rows":576,"n_cols":32,"rows_kept":576,"merged":[[0,0,0,31]]}
["Supplementary Table 8 - Genes lost by family along the bryophyte stem"]
["Orthogroup","N_Losses","Ath_Genes"]
[10002,1,"AT1G62050,","AT1G04780,","AT3G04470,","AT3G24210,","AT1G11740"]
[10005,1.32,"AT5G17330,","AT2G02010,","AT1G65960,","AT3G17760,","AT3G17720"]
[10064,1.02,"AT5G41460,","AT4G23490,","AT4G11350,","AT1G07850,","AT2G37730,","AT3G11420,","AT4G15240,","AT1G05280,","AT1G01570,","AT4G00295,","AT5G12460"]
[10100,20.55,"AT3G12630,","AT1G51200,","AT2G36320,","AT1G12440,","AT4G12040,","AT4G22820,","AT2G27580,","AT3G52800,","AT4G14225,","AT4G25380"]
[10133,0.54,"AT2G02990,","AT1G14220,","AT1G26820,","AT1G14210"]
[10134,2.63,"AT1G76690,","AT1G09400,","AT1G17990"]
[10158,0.99,"AT5G05820,","AT3G10290,","AT1G12500"]
[10165,0.54,"AT5G17820,","AT4G26010,","AT3G03670,","AT5G22410,","AT5G24070,","AT2G43480,","AT1G34510,","AT4G33870"]
[10202,1,"AT5G53450"]
[1021,0.59,"AT1G74055,","AT3G57500,","AT2G26520"]
[10221,0.54]
[10284,0.94]
[10296,0.64,"AT5G61750"]
[10322,0.9,"AT2G17120"]
[10404,14.06,"AT3G52720,","AT4G20990,","AT2G28210,","AT1G08080,","AT1G08065,","AT4G21000,","AT5G04180"]
[10408,0.7,"AT3G22850,","AT5G43830,","AT4G27450,","AT3G15450"]
[10472,0.61,"AT1G12860,","AT3G26744"]
[10511,0.69,"AT3G51370,","AT4G38520,","AT5G66080,","AT5G06750,","AT3G17090,","AT3G12620,","AT3G55050,","AT4G33920,","AT5G02760"]
[10544,1,"AT3G20580,","AT4G16120,","AT4G27110,","AT5G49270,","AT3G16860"]
[10587,4.31,"AT3G51440,","AT3G51430,","AT3G51450,","AT3G51420"]
[1066,1.48,"AT1G52740,","AT2G38810,","AT4G13570"]
[10710,3.45,"AT1G22400,","AT1G22370,","AT1G22340,","AT1G78270,","AT1G22380,","AT1G22360"]
[10729,1.13,"AT4G34050,","AT1G24735,","AT1G67980,","AT4G26220,","AT1G67990"]
[10748,0.54,"AT1G76610,","AT1G21050,","AT2G22460,","AT2G37880,","AT5G65340"]
[10771,1.04,"AT1G13130,","AT3G26140,","AT5G17500,","AT3G26130,","AT5G16700"]
[10772,0.72,"AT5G06690,","AT5G04260"]
[10863,0.62]
[10881,1,"AT5G35460"]
[10914,1,"AT4G36050"]
[10922,1.19,"AT5G10050,","AT5G65205"]
[10932,0.66]
[11080,0.75,"AT3G10320,","AT2G41640,","AT2G03370,","AT2G03360,","AT3G57380"]
[11163,0.52,"AT1G71900,","AT4G13800,","AT4G09640,","AT2G21120,","AT4G38730"]
[11175,1.66,"AT1G44780,","AT4G08310"]
[11258,0.64,"AT1G10970,","AT4G33020,","AT1G60960"]
[11292,0.64,"AT5G08520,","AT5G04760,","AT1G49010,","AT3G10580,","AT4G09450,","AT3G10585,","AT5G23650,","AT3G10595,","AT5G47290"]
[11376,14.21,"AT4G32890,","AT3G60530,","AT2G45050,","AT5G25830,","AT5G66320,","AT3G51080,","AT1G08010,","AT3G24050,","AT1G08000,","AT2G28340,","AT3G54810,","AT4G34680,","AT3G45170,","AT4G36240"]
[114,3.1,"AT3G01190,","AT5G15180,","AT4G11290,","AT1G05260,","AT3G21770,","AT1G05240,","AT2G39040"]
[11424,0.56,"AT2G24270"]
[11433,0.75,"AT4G16280,","AT2G47310"]
[11450,0.95,"AT5G10460"]
[1148,1.28,"AT3G19380,","AT1G49780"]
[11529,0.95,"AT5G20010,","AT5G55080"]
[11542,0.67,"AT3G61650"]
[11560,1.09,"AT3G10720,","AT5G04970,","AT4G02330,","AT2G47550,","AT1G02810,","AT3G10710,","AT5G04960,","AT1G53840,","AT3G14300,","AT5G27870,","AT4G33230,","AT3G05610,","AT2G26450,","AT2G47040,","AT3G62170,","AT5G49180,","AT3G06830,","AT4G15980,","AT3G47670"]
[11566,0.87,"AT1G08030"]
[1161,1.24,"AT2G21130,","AT2G16600,","AT4G34870,","AT3G56070,","AT3G22920"]
[11633,0.63,"AT2G39720,","AT5G59550,","AT3G46620,","AT5G02160,","AT3G30460"]
[11723,0.74,"AT1G28280,","AT2G33780,","AT3G15300,","AT1G80450,","AT5G53830"]
[11835,0.76,"AT1G01310,","AT5G57625,","AT4G30320,","AT4G25790,","AT4G25780,","AT4G31470"]
[11870,0.93,"AT3G02300"]
[11901,1,"AT1G68185"]
[11923,4.01,"AT3G09410,","AT3G09405,","AT4G19420,","AT5G45280,","AT4G19410,","AT3G62060,","AT1G57590,","AT5G26670,","AT2G46930,","AT5G23870,","AT1G09550"]
[11928,1.08]
[11932,0.62,"AT5G24860,","AT5G10625,","AT4G31380"]
[12000,1]
[12136,10.95,"AT2G35000,","AT2G35420,","AT3G05200,","AT1G72200,","AT5G27420,","AT4G17920,","AT4G09130,","AT1G35330,","AT4G09120,","AT1G22500,","AT4G40070,","AT4G09110,","AT2G34990,","AT1G32361,","AT4G30370,","AT2G27940,","AT4G09100,","AT5G46650"]
[12164,1.84,"AT1G27650,","AT3G44785"]
[12165,0.91,"AT5G35400"]
[12168,0.88,"AT3G26760,","AT3G26770,","AT4G03140"]
[12195,0.72,"AT5G13700"]
[12288,0.83,"AT1G08040,","AT1G67850,","AT3G27470,","AT3G26440,","AT1G13000,","AT1G24570,","AT2G25905"]
[12297,0.92,"AT5G21960,","AT1G19210,","AT1G74930,","AT4G31060"]
[12305,18.14,"AT5G54160,","AT1G21120,","AT1G76790,","AT1G77520,","AT5G53810,","AT1G33030,","AT1G63140,","AT1G51990,","AT1G62900,","AT5G37170,","AT1G77530"]
[12349,0.98,"AT1G10310"]
[12353,0.57]
[1236,0.86,"AT1G73805,","AT5G26920,","AT5G62570"]
[12403,0.56,"AT3G51930,","AT5G50120,","AT1G24530,","AT1G24130"]
[12420,0.67]
[12525,7.7,"AT3G27200,","AT5G07475,","AT2G44790,","AT1G72230,","AT3G60270,","AT1G22480,","AT3G60280"]
[12537,1.2,"AT5G14285,","AT3G25950,","AT3G27270"]
[12549,0.53,"AT4G02780"]
[12550,0.71,"AT4G14430,","AT4G14440,","AT1G65520"]
[1259,1]
[12633,1.21,"AT2G03890,","AT1G26270,","AT1G13640,","AT2G40850,","AT3G56600,","AT3G51190"]
[12686,0.65,"AT1G09430,","AT1G10670"]
[12752,0.87,"AT1G24650,","AT1G66150,","AT2G01820,","AT3G23750,","AT4G29654"]
[12756,0.89,"AT5G65730,","AT4G37800,","AT2G14620"]
[12785,1.2]
[12800,11.17,"AT5G28840,","AT5G66390,","AT2G18150,","AT4G36430,","AT1G44970,","AT2G35380,","AT3G50990"]
[12823,0.99,"AT5G07400"]
[12841,0.87,"AT5G63110,","AT4G38130,","AT5G35600"]
[12884,0.71,"AT3G26850,","AT2G33835"]
[12917,0.52,"AT1G16905,","AT1G78860,","AT1G78820"]
[12936,1]
[12950,0.86,"AT1G55690,","AT1G75370,","AT4G39180,","AT4G39170,","AT3G24840,","AT5G56160,","AT2G21520,","AT2G18180,","AT4G36490,","AT4G34580,","AT1G19650,","AT2G16380,","AT2G21540,","AT5G47510"]
[12968,0.75,"AT5G05770,","AT3G11260,","AT3G18010,","AT5G59340,","AT1G46480,","AT2G01500,","AT2G17950,","AT2G28610"]
[12983,0.98]
[13042,0.73,"AT5G23850,","AT3G48980,","AT2G45830,","AT3G61270,","AT1G63420,","AT3G61280,","AT2G45840,","AT3G61290"]
[13079,1.1,"AT1G47380,","AT1G09160,","AT1G68410"]
[13127,0.91,"AT1G01170,","AT4G00860"]
[13149,0.66]
[13291,0.65,"AT4G23560,","AT3G43860,","AT3G42153"]
[13307,1.29,"AT2G37870,","AT5G05960,","AT3G53980,","AT5G59070,","AT1G73160,","AT4G19460"]
[1332,1.85,"AT4G35840,","AT2G17730,","AT5G66070,","AT1G74410,","AT3G20395,","AT4G38140"]
[13323,0.88,"AT4G08150,","AT1G23380,","AT1G70510,","AT1G62360"]
[13385,0.66,"AT1G32900"]
[13414,0.52,"AT3G07860"]
[13420,0.98]
[13423,0.96]
[13477,1.99,"AT5G03040,","AT3G52290,","AT3G09710,","AT2G26410,","AT5G13460"]
[13487,0.83,"AT4G21060,","AT5G62620,","AT1G74800,","AT1G27120"]
[1353,0.65,"AT2G03500,","AT1G25550,","AT1G68670,","AT1G13300,","AT3G25790,","AT1G49560,","AT3G19070,","AT4G37180"]
[13556,2.82,"AT4G12080,","AT1G63470,","AT1G63480,","AT2G33620,","AT2G36560,","AT2G45850,","AT3G61310,","AT3G04590,","AT5G28590,","AT4G00200,","AT4G22770,","AT4G17950,","AT5G46640,","AT4G25320,","AT5G51590,","AT5G62260,","AT4G39925"]
[13564,7.81,"AT1G49240,","AT2G42090,","AT2G42100,","AT2G42170"]
[13606,0.53,"AT3G61960,","AT1G49180"]
[13612,0.81,"AT1G16330"]
[13618,0.62,"AT1G79930"]
[13622,1.29,"AT1G20693,","AT2G17560,","AT4G39110,","AT5G61350,","AT4G35570,","AT3G51880"]
[13655,0.68,"AT5G15700,","AT2G24120,","AT1G68990"]
[13667,0.51,"AT3G02050,","AT2G30070,","AT4G23640"]
[1372,0.54,"AT1G32360,","AT3G19360,","AT2G35430"]
[13749,2.16,"AT5G57620,","AT5G65790,","AT2G36890,","AT5G23000,","AT3G49690,","AT4G37780"]
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{"sheet":"Table_S9","index":8,"n_rows":8127,"n_cols":2,"rows_kept":8127,"merged":[[0,0,0,1]]}
["Supplementary Table 9 – Frequency of GO terms at ancestral tracheophyte node"]
[]
["GO_term ","Frequency"]
["'de novo' AMP biosynthetic process",1]
["'de novo' GDP-L-fucose biosynthetic process",1]
["'de novo' IMP biosynthetic process",1]
["'de novo' L-methionine biosynthetic process",1]
["'de novo' NAD biosynthetic process",1]
["'de novo' NAD biosynthetic process from aspartate",1]
["'de novo' posttranslational protein folding",5]
["'de novo' protein folding",14]
["'de novo' pyrimidine nucleobase biosynthetic process",1]
["(+)-abscisic acid 8'-hydroxylase activity",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transport",1]
["(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity",1]
["(1->3)-beta-D-glucan catabolic process",1]
["(1->3)-beta-D-glucan metabolic process",1]
["(R)-2-hydroxyglutarate dehydrogenase activity",1]
["(S)-2-hydroxy-acid oxidase activity",1]
["[2Fe-2S] cluster assembly",1]
["[myelin basic protein]-arginine N-methyltransferase activity",2]
["[pyruvate kinase]-phosphatase activity",1]
["1-2-alpha-L-fucosidase activity",1]
["1-4-alpha-glucan branching enzyme activity",1]
["1-4-alpha-oligoglucan phosphorylase activity",2]
["1-4-beta-D-xylan synthase activity",1]
["1-4-dihydroxy-2-naphthoate octaprenyltransferase activity",1]
["1-acylglycerophosphocholine O-acyltransferase activity",2]
["1-deoxy-D-xylulose-5-phosphate reductoisomerase activity",1]
["1-deoxy-D-xylulose-5-phosphate synthase activity",1]
["1-phosphatidylinositol 4-kinase activity",2]
["1-pyrroline-5-carboxylate dehydrogenase activity",1]
["2 iron- 2 sulfur cluster binding",1]
["2-3-bisphosphoglycerate-independent phosphoglycerate mutase activity",1]
["2-acylglycerol O-acyltransferase activity",1]
["2-alkenal reductase (NADP+) activity",1]
["2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity",1]
["2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity",1]
["2-carboxy-D-arabinitol-1-phosphatase activity",1]
["2-hydroxyglutarate dehydrogenase activity",1]
["2-oxoglutarate metabolic process",2]
["2-oxoglutarate-dependent dioxygenase activity",4]
["2'-deoxyribonucleotide metabolic process",1]
["23S rRNA (adenine(1618)-N(6))-methyltransferase activity",1]
["3-4-dihydroxy-2-butanone-4-phosphate synthase activity",1]
["3-8-divinyl protochlorophyllide a 8-vinyl reductase activity",1]
["3-chloroallyl aldehyde dehydrogenase activity",1]
["3-hydroxyacyl-CoA dehydratase activity",2]
["3-hydroxyacyl-CoA dehydrogenase activity",3]
["3-hydroxybutyrate dehydrogenase activity",1]
["3-hydroxybutyryl-CoA epimerase activity",2]
["3-isopropylmalate dehydratase activity",1]
["3-isopropylmalate dehydrogenase activity",1]
["3-keto-sphinganine metabolic process",1]
["3-mercaptopyruvate sulfurtransferase activity",1]
["3-methyl-2-oxobutanoate hydroxymethyltransferase activity",1]
["3-methylbut-2-enoyl-CoA(4-) metabolic process",1]
["3-oxoacyl-[acyl-carrier-protein] synthase activity",2]
["3-phosphoshikimate 1-carboxyvinyltransferase activity",1]
["3'-5' DNA helicase activity",7]
["3'-5' exonuclease activity",13]
["3'-5' RNA helicase activity",2]
["3'-5'-exodeoxyribonuclease activity",2]
["3'-5'-exoribonuclease activity",9]
["3'-phospho-5'-adenylyl sulfate transmembrane transport",1]
["3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity",1]
["3'-phosphoadenosine 5'-phosphosulfate transport",1]
["3'-tRNA processing endoribonuclease activity",1]
["3'-tyrosyl-DNA phosphodiesterase activity",1]
["3'-UTR-mediated mRNA stabilization",1]
["3'(2')-5'-bisphosphate nucleotidase activity",2]
["4 iron- 4 sulfur cluster binding",2]
["4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity",1]
["4-4-dimethyl-9beta-19-cyclopropylsterol oxidation",1]
["4-6-pyruvylated galactose residue biosynthetic process",1]
["4-alpha-glucanotransferase activity",1]
["4-alpha-methyl-delta7-sterol oxidation",1]
["4-aminobutyrate transaminase activity",1]
["4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity",1]
["4-hydroxyproline metabolic process",1]
["5-amino-6-(5-phosphoribosylamino)uracil reductase activity",1]
["5-formyltetrahydrofolate transmembrane transporter activity",1]
["5-formyltetrahydrofolate transport",1]
["5-methyltetrahydrofolate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity",1]
["5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity",1]
["5-phosphoribose 1-diphosphate biosynthetic process",1]
["5-phosphoribose 1-diphosphate metabolic process",1]
["5'-3' DNA helicase activity",4]
["5'-3' exodeoxyribonuclease activity",2]
["5'-3' exonuclease activity",6]
["5'-3' RNA helicase activity",4]
["5'-3' RNA polymerase activity",5]
["5'-flap endonuclease activity",2]
["6-phosphofructokinase activity",2]
["7-8-dihydroneopterin 3'-triphosphate biosynthetic process",1]
["7-methylguanosine mRNA capping",1]
["7-methylguanosine RNA capping",1]
["7S RNA binding",1]
["8-oxo-dGDP phosphatase activity",1]
["9-15-9'-tri-cis-zeta-carotene isomerase activity",1]
["9-9'-di-cis-zeta-carotene desaturation to 7-9-7'-9'-tetra-cis-lycopene",1]
["9-9'-dicis-carotene:quinone oxidoreductase activity",1]
["9-cis-epoxycarotenoid dioxygenase activity",2]
["9+0 non-motile cilium",1]
["9+2 non-motile cilium",1]
["90S preribosome",9]
["A2A adenosine receptor binding",1]
["ABC-type peptide transporter activity",2]
["ABC-type protein transporter activity",2]
["abscisic acid binding",2]
["abscisic acid biosynthetic process",1]
["abscisic acid metabolic process",1]
["abscisic acid transmembrane transporter activity",1]
["abscisic acid transport",1]
["abscisic acid-activated signaling pathway",10]
["abscission",2]
["acceptance of pollen",2]
["acetate metabolic process",2]
["acetate-CoA ligase activity",2]
["acetolactate synthase activity",2]
["acetolactate synthase complex",1]
["acetyl-CoA biosynthetic process",2]
["acetyl-CoA biosynthetic process from pyruvate",1]
["acetyl-CoA carboxylase activity",1]
["acetyl-CoA metabolic process",3]
["acetyl-CoA:L-glutamate N-acetyltransferase activity",1]
["acetylation-dependent protein binding",2]
["acetylglucosaminyltransferase activity",3]
["acetylglutamate kinase regulator activity",1]
["acetylpyruvate hydrolase activity",1]
["acetyltransferase activity",14]
["acetyltransferase complex",4]
["ACF complex",1]
["acid phosphatase activity",6]
["acid secretion",1]
["acid-amino acid ligase activity",3]
["acid-thiol ligase activity",6]
["acidic amino acid transmembrane transporter activity",1]
["acidic amino acid transport",1]
["acropetal auxin transport",1]
["acrosomal membrane",1]
["acrosomal vesicle",1]
["actin binding",8]
["actin cortical patch",3]
["actin cortical patch assembly",1]
["actin cortical patch localization",2]
["actin cortical patch organization",1]
["actin cytoskeleton",11]
["actin cytoskeleton organization",13]
["actin filament",2]
["actin filament binding",5]
["actin filament bundle assembly",3]
["actin filament bundle organization",3]
["actin filament capping",1]
["actin filament organization",11]
["actin filament polymerization",1]
["actin filament severing",1]
["actin filament-based movement",2]
["actin filament-based process",18]
["actin filament-based transport",2]
["actin fusion focus",1]
["actin nucleation",4]
["actin polymerization or depolymerization",2]
["Actinobacterium-type cell wall biogenesis",1]
["action potential",1]
["activation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["activation of GTPase activity",7]
["activation of immune response",13]
["activation of innate immune response",11]
["activation of MAPK activity",2]
["activation of MAPKK activity",2]
["activation of phospholipase C activity",1]
["activation of phospholipase D activity",1]
["activation of protein kinase activity",9]
["active ion transmembrane transporter activity",5]
["active transmembrane transporter activity",53]
["acyl carnitine transmembrane transport",1]
["acyl carnitine transmembrane transporter activity",1]
["acyl carnitine transport",1]
["acyl-[acyl-carrier-protein] hydrolase activity",1]
["acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity",1]
["acyl-CoA biosynthetic process",3]
["acyl-CoA dehydrogenase activity",5]
["acyl-CoA metabolic process",7]
["acyl-CoA oxidase activity",3]
["acylglycerol biosynthetic process",4]
["acylglycerol catabolic process",4]
["acylglycerol homeostasis",1]
["acylglycerol lipase activity",3]
["acylglycerol metabolic process",8]
["acylglycerol O-acyltransferase activity",1]
["acyltransferase activity",38]
["acyltransferase activity- transferring groups other than amino-acyl groups",32]
["acyltransferase- acyl groups converted into alkyl on transfer",3]
["adaxial/abaxial axis specification",1]
["adaxial/abaxial pattern specification",2]
["adenine biosynthetic process",1]
["adenine metabolic process",1]
["adenine nucleotide transmembrane transporter activity",8]
["adenine nucleotide transport",9]
["adenine phosphoribosyltransferase activity",1]
["adenine salvage",1]
["adenosine 3'-5'-bisphosphate transmembrane transport",1]
["adenosine 3'-5'-bisphosphate transmembrane transporter activity",1]
["adenosine receptor binding",1]
["adenosylmethionine-8-amino-7-oxononanoate transaminase activity",1]
["adenyl nucleotide binding",41]
["adenyl ribonucleotide binding",41]
["adenylate cyclase binding",1]
["adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway",1]
["adenylate cyclase-modulating G protein-coupled receptor signaling pathway",3]
["adenylate kinase activity",3]
["adenylosuccinate synthase activity",1]
["adenylyl-sulfate reductase activity",1]
["adenylylsulfate kinase activity",2]
["adenylyltransferase activity",9]
["adhesion of symbiont to host",1]
["adhesion of symbiont to host cell",1]
["adhesion of symbiont to host epithelial cell",1]
["ADP binding",2]
["ADP metabolic process",10]
["ADP transmembrane transporter activity",6]
["ADP transport",7]
["ADP-ribose pyrophosphohydrolase activity",1]
["ADP-sugar diphosphatase activity",1]
["adult behavior",1]
["adult locomotory behavior",1]
["aerobic electron transport chain",1]
["aerobic respiration",10]
["aggregation involved in sorocarp development",2]
["aggregation of unicellular organisms",2]
["aggresome assembly",1]
["aging",23]
["agmatinase activity",1]
["agmatine deiminase activity",1]
["alanine catabolic process",1]
["alanine metabolic process",2]
["alanine-glyoxylate transaminase activity",2]
["alanine-oxo-acid transaminase activity",2]
["alanine-tRNA ligase activity",1]
["alanyl-tRNA aminoacylation",1]
["alcohol binding",5]
["alcohol biosynthetic process",14]
["alcohol catabolic process",6]
["alcohol metabolic process",23]
["alcohol transmembrane transporter activity",3]
["aldehyde biosynthetic process",4]
["aldehyde catabolic process",3]
["aldehyde dehydrogenase (NAD+) activity",3]
["aldehyde dehydrogenase (NADP+) activity",1]
["aldehyde-lyase activity",3]
["alditol biosynthetic process",1]
["alditol catabolic process",2]
["alditol metabolic process",4]
["alditol phosphate metabolic process",2]
["aldo-keto reductase (NADP) activity",1]
["aldonate transmembrane transport",1]
["aldonate transmembrane transporter activity",1]
["alkali metal ion binding",1]
["alkaloid metabolic process",1]
["alkane 1-monooxygenase activity",1]
["alkane biosynthetic process",2]
["alkene binding",2]
["alkene biosynthetic process",1]
["alkylthioltransferase activity",1]
["allantoate deiminase activity",1]
["allantoin catabolic process",4]
["allantoin metabolic process",4]
["allantoinase activity",1]
["alpha DNA polymerase:primase complex",1]
["alpha-(1->3)-fucosyltransferase activity",1]
["alpha-1-2-mannosyltransferase activity",2]
["alpha-1-3-glucosidase activity",1]
["alpha-1-3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-1-6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity",1]
["alpha-alpha-trehalase activity",2]
["alpha-alpha-trehalose-phosphate synthase (UDP-forming) activity",1]
["alpha-amino acid biosynthetic process",31]
["alpha-amino acid catabolic process",14]
["alpha-amino acid metabolic process",53]
["alpha-amylase activity",2]
["alpha-galactosidase activity",1]
["alpha-glucosidase activity",1]
["alpha-ketoglutarate transmembrane transporter activity",1]
["alpha-ketoglutarate transport",2]
["alpha-L-arabinofuranosidase activity",1]
["alpha-L-fucosidase activity",1]
["alpha-mannosidase activity",5]
["alpha-tubulin binding",2]
["alternative oxidase activity",1]
["alveolar lamellar body",1]
["ameboidal-type cell migration",1]
["amide binding",17]
["amide biosynthetic process",77]
["amide transmembrane transporter activity",10]
["amide transport",104]
["amidine-lyase activity",1]
["amidophosphoribosyltransferase activity",1]
["amine biosynthetic process",7]
["amine catabolic process",3]
["amine metabolic process",15]
["amino acid activation",17]
["amino acid binding",3]
["amino acid homeostasis",1]
["amino acid kinase activity",2]
["amino acid salvage",1]
["amino acid transmembrane transport",12]
["amino acid transmembrane transporter activity",12]
["amino acid transport",12]
["amino sugar biosynthetic process",2]
["amino sugar catabolic process",1]
["amino sugar metabolic process",5]
["amino-acid racemase activity",1]
["aminoacyl-tRNA hydrolase activity",1]
["aminoacyl-tRNA ligase activity",16]
["aminoacyl-tRNA synthetase multienzyme complex",3]
["aminoacyltransferase activity",3]
["aminoglycan catabolic process",2]
["aminoglycan metabolic process",2]
["aminopeptidase activity",5]
["ammeline aminohydrolase activity",1]
["ammonia assimilation cycle",2]
["ammonia-lyase activity",3]
["ammonium homeostasis",1]
["ammonium ion binding",1]
["ammonium ion metabolic process",12]
["ammonium transmembrane transport",4]
["ammonium transmembrane transporter activity",4]
["ammonium transport",5]
["AMP binding",1]
["AMP biosynthetic process",1]
["AMP metabolic process",1]
["AMP transmembrane transporter activity",1]
["AMP transport",1]
["amylase activity",2]
["amylopectin binding",2]
["amylopectin biosynthetic process",4]
["amylopectin metabolic process",4]
["amyloplast",9]
["amyloplast organization",1]
["anaerobic respiration",1]
["anaphase-promoting complex",2]
["anaphase-promoting complex-dependent catabolic process",1]
["anastral spindle assembly",1]
["anastral spindle assembly involved in male meiosis",1]
["anatomical structure arrangement",11]
["anatomical structure development",449]
["anatomical structure formation involved in morphogenesis",52]
["anatomical structure homeostasis",15]
["anatomical structure maturation",24]
["anatomical structure morphogenesis",175]
["anchored component of membrane",9]
["anchored component of plasma membrane",7]
["anchored component of synaptic vesicle membrane",1]
["androecium development",17]
["androgen receptor binding",1]
["animal organ development",23]
["animal organ formation",1]
["animal organ morphogenesis",6]
["anion binding",102]
["anion channel activity",3]
["anion homeostasis",7]
["anion transmembrane transport",60]
["anion transmembrane transporter activity",55]
["anion transport",71]
["anion:anion antiporter activity",3]
["anisotropic cell growth",1]
["annealing activity",1]
["annealing helicase activity",1]
["annulate lamellae",1]
["anterior/posterior pattern specification",1]
["anterograde axonal transport",2]
["anterograde trans-synaptic signaling",3]
["anther dehiscence",4]
["anther development",9]
["anther wall tapetum development",1]
["anthocyanidin reductase activity",1]
["anthocyanin accumulation in tissues in response to UV light",2]
["anthocyanin-containing compound biosynthetic process",3]
["anthocyanin-containing compound metabolic process",6]
["antibiotic biosynthetic process",3]
["antibiotic catabolic process",7]
["antibiotic metabolic process",18]
["antifungal innate immune response",1]
["antigen processing and presentation",5]
["antigen processing and presentation of exogenous antigen",4]
["antigen processing and presentation of exogenous peptide antigen",4]
["antigen processing and presentation of exogenous peptide antigen via MHC class II",4]
["antigen processing and presentation of peptide antigen",5]
["antigen processing and presentation of peptide antigen via MHC class II",5]
["antigen processing and presentation of peptide or polysaccharide antigen via MHC class II",5]
["antigen receptor-mediated signaling pathway",2]
["antioxidant activity",11]
["antiporter activity",25]
["antisense RNA metabolic process",2]
["AP-1 adaptor complex",1]
["AP-2 adaptor complex",1]
["AP-4 adaptor complex",3]
["AP-type membrane coat adaptor complex",5]
["apical part of cell",1]
["apical plasma membrane",1]
["apical protein localization",1]
["apocarotenoid biosynthetic process",1]
["apocarotenoid metabolic process",1]
["apolipoprotein B mRNA editing enzyme complex",1]
["apoplast",43]
["apoptotic cell clearance",2]
["apoptotic mitochondrial changes",1]
["apoptotic process",6]
["apoptotic process involved in development",1]
["apoptotic signaling pathway",1]
["appendage development",4]
["appendage morphogenesis",4]
["arabinogalactan protein metabolic process",4]
["arabinose biosynthetic process",1]
["arabinose metabolic process",1]
["arachidonate transport",1]
["arachidonic acid metabolic process",2]
["arachidonic acid secretion",1]
["arbuscular mycorrhizal association",2]
["arginase activity",1]
["arginine biosynthetic process",4]
["arginine biosynthetic process via ornithine",1]
["arginine catabolic process",1]
["arginine decarboxylase activity",1]
["arginine metabolic process",5]
["arginine N-methyltransferase activity",6]
["arginine transmembrane transport",1]
["arginine transmembrane transporter activity",1]
["arginine transport",1]
["arginine-tRNA ligase activity",1]
["argininosuccinate lyase activity",1]
["argininosuccinate metabolic process",1]
["argininosuccinate synthase activity",1]
["arginyl-tRNA aminoacylation",1]
["aromatic amino acid family biosynthetic process",6]
["aromatic amino acid family biosynthetic process- prephenate pathway",3]
["aromatic amino acid family catabolic process",4]
["aromatic amino acid family metabolic process",11]
["aromatic amino acid transmembrane transporter activity",1]
["aromatic amino acid transport",1]
["aromatic compound biosynthetic process",154]
["aromatic compound catabolic process",65]
["Arp2/3 protein complex",2]
["arsenate ion transmembrane transport",2]
["arsenate ion transmembrane transporter activity",2]
["arsenite secondary active transmembrane transporter activity",2]
["arsenite transmembrane transporter activity",2]
["arsenite transport",2]
["ascospore formation",1]
["ascospore-type prospore",1]
["ascospore-type prospore assembly",1]
["ascospore-type prospore-specific spindle pole body remodeling",1]
["asexual reproduction",1]
["asexual sporulation",1]
["asparagine-tRNA ligase activity",1]
["asparaginyl-tRNA aminoacylation",1]
["aspartate carbamoyltransferase activity",1]
["aspartate family amino acid biosynthetic process",5]
["aspartate family amino acid metabolic process",9]
["aspartate kinase activity",2]
["aspartate metabolic process",3]
["aspartate-prephenate aminotransferase activity",1]
["aspartate-tRNA ligase activity",1]
["aspartic endopeptidase activity- intramembrane cleaving",1]
["aspartic-type endopeptidase activity",3]
["aspartic-type peptidase activity",3]
["aspartyl-tRNA aminoacylation",1]
["assembly of large subunit precursor of preribosome",1]
["aster",1]
["astral microtubule organization",1]
["asymmetric cell division",7]
["asymmetric neuroblast division",1]
["asymmetric stem cell division",1]
["ATF6-mediated unfolded protein response",1]
["Atg1/ULK1 kinase complex",1]
["Atg12 activating enzyme activity",1]
["Atg12-Atg5-Atg16 complex",1]
["Atg8 activating enzyme activity",1]
["Atg8 ligase activity",1]
["ATP binding",38]
["ATP biosynthetic process",11]
["ATP citrate synthase activity",1]
["ATP generation from ADP",10]
["ATP generation from poly-ADP-D-ribose",1]
["ATP metabolic process",18]
["ATP phosphoribosyltransferase activity",1]
["ATP synthesis coupled electron transport",3]
["ATP synthesis coupled proton transport",1]
["ATP transmembrane transporter activity",7]
["ATP transport",7]
["ATP-dependent chromatin remodeling",6]
["ATP-dependent microtubule motor activity",5]
["ATP-dependent microtubule motor activity- minus-end-directed",1]
["ATP-dependent microtubule motor activity- plus-end-directed",4]
["ATP-dependent NAD(P)H-hydrate dehydratase activity",1]
["ATP-dependent peptidase activity",10]
["ATP-independent citrate lyase complex",1]
["ATP:ADP antiporter activity",2]
["ATPase",202]
["ATPase activator activity",3]
["ATPase activity- coupled to transmembrane movement of ions- rotational mechanism",3]
["ATPase binding",2]
["ATPase complex",12]
["ATPase dependent transmembrane transport complex",1]
["ATPase regulator activity",3]
["ATPase- acting on DNA",18]
["ATPase- acting on RNA",32]
["ATPase-coupled arsenite transmembrane transporter activity",2]
["ATPase-coupled cation transmembrane transporter activity",5]
["ATPase-coupled inorganic anion transmembrane transporter activity",2]
["ATPase-coupled intramembrane lipid transporter activity",1]
["ATPase-coupled ion transmembrane transporter activity",5]
["ATPase-coupled lipid transmembrane transporter activity",1]
["ATPase-coupled transmembrane transporter activity",77]
["attachment of GPI anchor to protein",2]
["attachment of mitotic spindle microtubules to kinetochore",8]
["attachment of spindle microtubules to kinetochore",11]
["attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation",2]
["autolysis",1]
["autonomic nervous system development",1]
["autophagosome",4]
["autophagosome assembly",13]
["autophagosome maturation",1]
["autophagosome membrane",1]
["autophagosome organization",13]
["autophagy",21]
["autophagy of mitochondrion",7]
["autophagy of nucleus",7]
["autophagy of peroxisome",1]
["auxin binding",2]
["auxin biosynthetic process",2]
["auxin efflux",4]
["auxin efflux transmembrane transporter activity",4]
["auxin homeostasis",8]
["auxin influx",1]
["auxin influx transmembrane transporter activity",1]
["auxin metabolic process",4]
["auxin polar transport",9]
["auxin transmembrane transporter activity",5]
["auxin transport",14]
["auxin-activated signaling pathway",4]
["axillary shoot meristem initiation",1]
["axis specification",5]
["axo-dendritic transport",2]
["axon",4]
["axon development",1]
["axon ensheathment",2]
["axon guidance",1]
["axon terminus",2]
["axonal transport",2]
["axonal transport of mitochondrion",2]
["axonemal basal plate",1]
["axonemal dynein complex assembly",4]
["axonemal microtubule depolymerization",1]
["axonemal outer doublet",1]
["axoneme",6]
["axoneme assembly",5]
["axonogenesis",1]
["azole transmembrane transport",1]
["azole transmembrane transporter activity",1]
["azurophil granule",1]
["azurophil granule membrane",1]
["barbed-end actin filament capping",1]
["basal RNA polymerase II transcription machinery binding",4]
["basal transcription machinery binding",4]
["base conversion or substitution editing",1]
["base-excision repair",3]
["base-excision repair- AP site formation",1]
["base-excision repair- gap-filling",1]
["basic amino acid transmembrane transport",1]
["basic amino acid transmembrane transporter activity",1]
["basic amino acid transport",1]
["basipetal auxin transport",1]
["basophil activation",1]
["basophil activation involved in immune response",1]
["BAT3 complex binding",1]
["behavior",7]
["benzene-containing compound metabolic process",3]
["beta-1-3-galactosyltransferase activity",1]
["beta-1-4-mannosyltransferase activity",2]
["beta-alanine catabolic process",1]
["beta-alanine metabolic process",1]
["beta-catenin binding",1]
["beta-catenin-TCF complex assembly",1]
["beta-D-fucosidase activity",1]
["beta-galactosidase activity",3]
["beta-gentiobiose beta-glucosidase activity",1]
["beta-glucan biosynthetic process",5]
["beta-glucan catabolic process",1]
["beta-glucan metabolic process",8]
["beta-glucosidase activity",5]
["beta-lactamase activity",1]
["beta-mannosidase activity",1]
["beta-N-acetylglucosaminidase activity",1]
["beta-N-acetylhexosaminidase activity",1]
["beta-tubulin binding",4]
["betaine-aldehyde dehydrogenase activity",1]
["bile acid metabolic process",1]
["binding",688]
["bioactive lipid receptor activity",1]
["biofilm matrix",1]
["biological adhesion",5]
["biological process involved in interaction with host",9]
["biological process involved in interaction with symbiont",2]
["biological process involved in interspecies interaction between organisms",22]
["biological process involved in intraspecies interaction between organisms",8]
["biological process involved in symbiotic interaction",21]
["biological regulation",708]
["biological_process",1888]
["biomineral tissue development",1]
["biosynthetic process",492]
["biotin binding",1]
["biotin biosynthetic process",3]
["biotin carboxyl carrier protein biosynthetic process",1]
["biotin metabolic process",3]
["biotin synthase activity",1]
["biotin-[acetyl-CoA-carboxylase] ligase activity",1]
["biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity",1]
["biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity",1]
["biotin-protein ligase activity",1]
["blastocyst development",4]
["blastocyst formation",1]
["blastocyst growth",1]
["blood coagulation",3]
["blood vessel development",2]
["blood vessel morphogenesis",1]
["blue light photoreceptor activity",1]
["blue light signaling pathway",5]
["body morphogenesis",1]
["bone development",1]
["bone marrow development",1]
["bone mineralization",1]
["bone remodeling",1]
["bone resorption",1]
["border follicle cell migration",1]
["bounding membrane of organelle",174]
["box C/D RNP complex",2]
["box H/ACA RNA 3'-end processing",1]
["box H/ACA RNA metabolic process",1]
["box H/ACA RNA processing",1]
["box H/ACA RNP complex",2]
["box H/ACA snoRNA binding",1]
["box H/ACA snoRNP assembly",1]
["box H/ACA snoRNP complex",2]
["brain development",6]
["brain morphogenesis",1]
["branched-chain amino acid biosynthetic process",6]
["branched-chain amino acid catabolic process",4]
["branched-chain amino acid metabolic process",10]
["brassinosteroid biosynthetic process",5]
["brassinosteroid homeostasis",4]
["brassinosteroid mediated signaling pathway",6]
["brassinosteroid metabolic process",5]
["Bub1-Bub3 complex localization to kinetochore",1]
["bubble DNA binding",1]
["bundle sheath cell fate specification",1]
["butyrate metabolic process",1]
["butyrate-CoA ligase activity",1]
["C-22 sterol desaturase activity",1]
["C-4 methylsterol oxidase activity",2]
["C-5 methylation of cytosine",1]
["C-5 sterol desaturase activity",1]
["C-8 sterol isomerase activity",1]
["C-acyltransferase activity",1]
["C-methyltransferase activity",3]
["C-palmitoyltransferase activity",1]
["C-terminal protein amino acid modification",2]
["C-terminal protein lipidation",2]
["C4-dicarboxylate transmembrane transporter activity",3]
["C4-dicarboxylate transport",3]
["cadherin binding",1]
["cadmium ion binding",1]
["cadmium ion transmembrane transport",1]
["cadmium ion transmembrane transporter activity",1]
["cadmium ion transport",2]
["CAF-1 complex",1]
["caffeoyl-CoA O-methyltransferase activity",1]
["caffeoyl-CoA: alcohol caffeoyl transferase activity",1]
["calcium channel activity",5]
["calcium ion binding",13]
["calcium ion export",1]
["calcium ion export across plasma membrane",1]
["calcium ion homeostasis",6]
["calcium ion import",2]
["calcium ion import across plasma membrane",1]
["calcium ion import into cytosol",1]
["calcium ion transmembrane import into cytosol",1]
["calcium ion transmembrane transport",9]
["calcium ion transmembrane transporter activity",9]
["calcium ion transport",10]
["calcium ion transport into cytosol",1]
["calcium-dependent ATPase activity",1]
["calcium-dependent cysteine-type endopeptidase activity",1]
["calcium-dependent protein kinase activity",2]
["calcium-dependent protein serine/threonine kinase activity",2]
["calcium-independent phospholipase A2 activity",1]
["calcium-ion regulated exocytosis",2]
["calcium-mediated signaling",3]
["calcium:cation antiporter activity",4]
["calcium:proton antiporter activity",1]
["calcium:sodium antiporter activity",3]
["callose deposition in cell wall",6]
["callose localization",7]
["callus formation",1]
["calmodulin binding",11]
["calmodulin-dependent protein kinase activity",2]
["camera-type eye development",1]
["cAMP-mediated signaling",1]
["canonical glycolysis",1]
["canonical Wnt signaling pathway",1]
["carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity",1]
["carbamoyl-phosphate synthase complex",1]
["carbohydrate binding",10]
["carbohydrate biosynthetic process",48]
["carbohydrate catabolic process",41]
["carbohydrate derivative binding",63]
["carbohydrate derivative biosynthetic process",93]
["carbohydrate derivative catabolic process",10]
["carbohydrate derivative metabolic process",145]
["carbohydrate derivative transmembrane transporter activity",18]
["carbohydrate derivative transport",22]
["carbohydrate export",1]
["carbohydrate homeostasis",1]
["carbohydrate kinase activity",6]
["carbohydrate mediated signaling",13]
["carbohydrate metabolic process",106]
["carbohydrate phosphatase activity",7]
["carbohydrate phosphorylation",6]
["carbohydrate transmembrane transport",9]
["carbohydrate transmembrane transporter activity",9]
["carbohydrate transport",10]
["carbohydrate:cation symporter activity",5]
["carbohydrate:proton symporter activity",5]
["carbon fixation",4]
["carbon-carbon lyase activity",16]
["carbon-nitrogen ligase activity- with glutamine as amido-N-donor",2]
["carbon-nitrogen lyase activity",4]
["carbon-oxygen lyase activity",15]
["carbon-sulfur lyase activity",5]
["carboxy-lyase activity",8]
["carboxy-terminal domain protein kinase complex",4]
["carboxyl- or carbamoyltransferase activity",1]
["carboxylic acid binding",10]
["carboxylic acid biosynthetic process",82]
["carboxylic acid catabolic process",33]
["carboxylic acid metabolic process",170]
["carboxylic acid transmembrane transport",27]
["carboxylic acid transmembrane transporter activity",27]
["carboxylic acid transport",30]
["carboxylic ester hydrolase activity",15]
["carboxypeptidase activity",5]
["cardiac cell development",1]
["cardiac chamber development",1]
["cardiac chamber morphogenesis",1]
["cardiac conduction",1]
["cardiac muscle cell development",1]
["cardiac muscle cell differentiation",2]
["cardiac muscle tissue development",2]
["cardiac septum development",1]
["cardiac septum morphogenesis",1]
["cardiocyte differentiation",2]
["cardiolipin acyl-chain remodeling",1]
["cardiolipin metabolic process",1]
["carotene beta-ring hydroxylase activity",1]
["carotene biosynthetic process",2]
["carotene catabolic process",2]
["carotene metabolic process",4]
["carotenoid biosynthetic process",9]
["carotenoid catabolic process",1]
["carotenoid dioxygenase activity",2]
["carotenoid metabolic process",14]
["carpel development",13]
["cartilage development",1]
["Casparian strip",1]
["catabolic process",249]
["catabolism by organism of cell wall peptidoglycan in other organism",1]
["catalytic activity",1034]
["catalytic activity- acting on a glycoprotein",4]
["catalytic activity- acting on a protein",244]
["catalytic activity- acting on a rRNA",8]
["catalytic activity- acting on a tRNA",22]
["catalytic activity- acting on DNA",42]
["catalytic activity- acting on RNA",90]
["catalytic complex",171]
["catalytic step 1 spliceosome",3]
["catalytic step 2 spliceosome",13]
["cation binding",94]
["cation channel activity",11]
["cation homeostasis",31]
["cation transmembrane transport",56]
["cation transmembrane transporter activity",50]
["cation transport",59]
["cation-transporting ATPase complex",1]
["cation:cation antiporter activity",7]
["CCAAT-binding factor complex",1]
["CCR4-NOT complex",1]
["CCR4-NOT core complex",1]
["Cdc73/Paf1 complex",1]
["CDP-alcohol phosphatidyltransferase activity",1]
["CDP-choline pathway",1]
["CDP-diacylglycerol biosynthetic process",1]
["CDP-diacylglycerol metabolic process",1]
["cell activation",5]
["cell activation involved in immune response",4]
["cell adhesion",4]
["cell adhesion molecule binding",1]
["cell aggregation",2]
["cell aging",1]
["cell body",4]
["cell chemotaxis",1]
["cell communication",205]
["cell communication by electrical coupling",1]
["cell communication by electrical coupling involved in cardiac conduction",1]
["cell communication involved in cardiac conduction",1]
["cell cortex",13]
["cell cortex of cell tip",1]
["cell cortex region",1]
["cell cycle",95]
["cell cycle checkpoint signaling",16]
["cell cycle DNA replication",8]
["cell cycle DNA replication initiation",1]
["cell cycle G1/S phase transition",4]
["cell cycle G2/M phase transition",3]
["cell cycle phase transition",10]
["cell cycle process",92]
["cell cycle switching",1]
["cell cycle switching- mitotic to meiotic cell cycle",1]
["cell death",28]
["cell death in response to oxidative stress",5]
["cell development",60]
["cell differentiation",100]
["cell differentiation in spinal cord",1]
["cell division",34]
["cell division site",5]
["cell envelope",1]
["cell fate commitment",9]
["cell fate commitment involved in formation of primary germ layer",1]
["cell fate specification",6]
["cell growth",58]
["cell junction",128]
["cell junction organization",3]
["cell leading edge",2]
["cell maturation",20]
["cell migration",6]
["cell morphogenesis",58]
["cell morphogenesis involved in differentiation",31]
["cell morphogenesis involved in neuron differentiation",2]
["cell motility",10]
["cell part morphogenesis",3]
["cell periphery",343]
["cell plate",9]
["cell plate assembly",1]
["cell plate formation involved in plant-type cell wall biogenesis",1]
["cell pole",1]
["cell population proliferation",13]
["cell projection",30]
["cell projection assembly",11]
["cell projection membrane",3]
["cell projection morphogenesis",2]
["cell projection organization",16]
["cell recognition",3]
["cell redox homeostasis",5]
["cell septum",1]
["cell surface",7]
["cell surface receptor signaling pathway",23]
["cell surface receptor signaling pathway involved in cell-cell signaling",2]
["cell tip",6]
["cell tip growth",16]
["cell trailing edge",1]
["cell trailing edge membrane",1]
["cell volume homeostasis",1]
["cell wall",66]
["cell wall assembly",1]
["cell wall biogenesis",25]
["cell wall disassembly",1]
["cell wall disruption in other organism",1]
["cell wall hydroxyproline-rich glycoprotein metabolic process",4]
["cell wall macromolecule biosynthetic process",10]
["cell wall macromolecule catabolic process",2]
["cell wall macromolecule metabolic process",22]
["cell wall modification",9]
["cell wall modification involved in multidimensional cell growth",1]
["cell wall organization",23]
["cell wall organization involved in conjugation with cellular fusion",1]
["cell wall organization or biogenesis",53]
["cell wall pectin biosynthetic process",5]
["cell wall pectin metabolic process",7]
["cell wall polysaccharide biosynthetic process",10]
["cell wall polysaccharide catabolic process",1]
["cell wall polysaccharide metabolic process",17]
["cell wall proteoglycan metabolic process",4]
["cell wall thickening",6]
["cell-cell adhesion",1]
["cell-cell contact zone",1]
["cell-cell junction",125]
["cell-cell junction organization",3]
["cell-cell recognition",1]
["cell-cell signaling",7]
["cell-cell signaling by wnt",2]
["cellobiose glucosidase activity",3]
["cellular alcohol catabolic process",1]
["cellular alcohol metabolic process",1]
["cellular aldehyde metabolic process",20]
["cellular alkane metabolic process",2]
["cellular alkene metabolic process",1]
["cellular amide catabolic process",4]
["cellular amide metabolic process",96]
["cellular amine metabolic process",11]
["cellular amino acid biosynthetic process",36]
["cellular amino acid catabolic process",16]
["cellular amino acid metabolic process",77]
["cellular ammonium homeostasis",1]
["cellular aromatic compound metabolic process",513]
["cellular biogenic amine biosynthetic process",7]
["cellular biogenic amine catabolic process",3]
["cellular biogenic amine metabolic process",11]
["cellular biosynthetic process",451]
["cellular bud",1]
["cellular bud neck",1]
["cellular bud tip",1]
["cellular calcium ion homeostasis",4]
["cellular carbohydrate biosynthetic process",33]
["cellular carbohydrate catabolic process",22]
["cellular carbohydrate metabolic process",75]
["cellular catabolic process",223]
["cellular cation homeostasis",16]
["cellular chemical homeostasis",18]
["cellular component assembly",177]
["cellular component assembly involved in morphogenesis",14]
["cellular component biogenesis",258]
["cellular component disassembly",25]
["cellular component macromolecule biosynthetic process",10]
["cellular component maintenance",1]
["cellular component morphogenesis",71]
["cellular component organization",501]
["cellular component organization or biogenesis",560]
["cellular copper ion homeostasis",1]
["cellular defense response",2]
["cellular detoxification",13]
["cellular developmental process",138]
["cellular divalent inorganic cation homeostasis",5]
["cellular glucan metabolic process",36]
["cellular homeostasis",26]
["cellular hormone metabolic process",5]
["cellular hypotonic response",1]
["cellular ion homeostasis",16]
["cellular iron ion homeostasis",3]
["cellular ketone metabolic process",10]
["cellular lipid catabolic process",28]
["cellular lipid metabolic process",134]
["cellular localization",162]
["cellular macromolecule biosynthetic process",202]
["cellular macromolecule catabolic process",102]
["cellular macromolecule localization",116]
["cellular macromolecule metabolic process",610]
["cellular metabolic compound salvage",19]
["cellular metabolic process",1178]
["cellular metal ion homeostasis",10]
["cellular modified amino acid biosynthetic process",6]
["cellular modified amino acid catabolic process",2]
["cellular modified amino acid metabolic process",16]
["cellular monovalent inorganic cation homeostasis",7]
["cellular nitrogen compound biosynthetic process",214]
["cellular nitrogen compound catabolic process",65]
["cellular nitrogen compound metabolic process",548]
["cellular oxidant detoxification",12]
["cellular polysaccharide biosynthetic process",26]
["cellular polysaccharide catabolic process",16]
["cellular polysaccharide metabolic process",47]
["cellular potassium ion homeostasis",1]
["cellular process",1529]
["cellular process involved in reproduction in multicellular organism",21]
["cellular protein catabolic process",70]
["cellular protein complex disassembly",9]
["cellular protein localization",106]
["cellular protein metabolic process",396]
["cellular protein modification process",291]
["cellular protein-containing complex assembly",96]
["cellular protein-containing complex localization",5]
["cellular respiration",18]
["cellular response to abiotic stimulus",38]
["cellular response to abscisic acid stimulus",13]
["cellular response to acetate",1]
["cellular response to acid chemical",39]
["cellular response to alcohol",13]
["cellular response to amino acid starvation",3]
["cellular response to amino acid stimulus",3]
["cellular response to anoxia",1]
["cellular response to antibiotic",14]
["cellular response to auxin stimulus",6]
["cellular response to biotic stimulus",3]
["cellular response to blue light",6]
["cellular response to brassinosteroid stimulus",6]
["cellular response to calcium ion",3]
["cellular response to cAMP",1]
["cellular response to carbohydrate stimulus",15]
["cellular response to chemical stimulus",134]
["cellular response to cold",6]
["cellular response to copper ion",1]
["cellular response to copper ion starvation",2]
["cellular response to cytokine stimulus",2]
["cellular response to cytokinin stimulus",5]
["cellular response to decreased oxygen levels",5]
["cellular response to disaccharide stimulus",2]
["cellular response to DNA damage stimulus",95]
["cellular response to drug",20]
["cellular response to dsRNA",9]
["cellular response to endogenous stimulus",61]
["cellular response to environmental stimulus",38]
["cellular response to ethylene stimulus",16]
["cellular response to external biotic stimulus",1]
["cellular response to external stimulus",54]
["cellular response to extracellular stimulus",51]
["cellular response to gamma radiation",1]
["cellular response to gibberellin stimulus",5]
["cellular response to glucose starvation",3]
["cellular response to growth factor stimulus",2]
["cellular response to heat",2]
["cellular response to high light intensity",1]
["cellular response to hormone stimulus",55]
["cellular response to hydrogen peroxide",2]
["cellular response to hypoxia",4]
["cellular response to indolebutyric acid stimulus",1]
["cellular response to inorganic substance",16]
["cellular response to insulin stimulus",2]
["cellular response to interferon-gamma",2]
["cellular response to ionizing radiation",3]
["cellular response to iron ion",6]
["cellular response to jasmonic acid stimulus",11]
["cellular response to leucine",1]
["cellular response to leucine starvation",1]
["cellular response to light intensity",2]
["cellular response to light stimulus",24]
["cellular response to lipid",21]
["cellular response to lipopolysaccharide",1]
["cellular response to magnesium ion",1]
["cellular response to manganese ion",1]
["cellular response to mechanical stimulus",2]
["cellular response to metal ion",14]
["cellular response to misfolded protein",3]
["cellular response to molecule of bacterial origin",1]
["cellular response to nerve growth factor stimulus",1]
["cellular response to nitrate",2]
["cellular response to nitric oxide",1]
["cellular response to nitrogen compound",20]
["cellular response to nitrogen levels",10]
["cellular response to nitrogen starvation",7]
["cellular response to nutrient",4]
["cellular response to nutrient levels",47]
["cellular response to organic cyclic compound",28]
["cellular response to organic substance",90]
["cellular response to organonitrogen compound",8]
["cellular response to osmotic stress",8]
["cellular response to oxidative stress",26]
["cellular response to oxygen levels",5]
["cellular response to oxygen radical",1]
["cellular response to oxygen-containing compound",68]
["cellular response to ozone",1]
["cellular response to peptide",2]
["cellular response to peptide hormone stimulus",2]
["cellular response to pheromone",1]
["cellular response to phosphate starvation",18]
["cellular response to potassium ion",1]
["cellular response to radiation",27]
["cellular response to reactive nitrogen species",3]
["cellular response to reactive oxygen species",11]
["cellular response to red or far red light",4]
["cellular response to redox state",1]
["cellular response to salicylic acid stimulus",10]
["cellular response to salt stress",5]
["cellular response to singlet oxygen",4]
["cellular response to starvation",40]
["cellular response to steroid hormone stimulus",6]
["cellular response to stimulus",376]
["cellular response to stress",221]
["cellular response to sucrose starvation",2]
["cellular response to sucrose stimulus",2]
["cellular response to sulfate starvation",1]
["cellular response to superoxide",1]
["cellular response to topologically incorrect protein",9]
["cellular response to toxic substance",15]
["cellular response to transforming growth factor beta stimulus",1]
["cellular response to trichostatin A",1]
["cellular response to unfolded protein",7]
["cellular response to UV",8]
["cellular response to UV-A",1]
["cellular response to UV-B",1]
["cellular response to UV-C",2]
["cellular response to virus",1]
["cellular response to water deprivation",4]
["cellular response to water stimulus",4]
["cellular transition metal ion homeostasis",5]
["cellular water homeostasis",1]
["cellular zinc ion homeostasis",1]
["cellular_component",1947]
["cellularization",1]
["cellulase activity",1]
["cellulose biosynthetic process",5]
["cellulose metabolic process",7]
["cellulose microfibril organization",1]
["central nervous system development",10]
["central nervous system neuron differentiation",2]
["central vacuole",1]
["centriolar satellite",1]
["centriole",4]
["centriole assembly",3]
["centriole replication",3]
["centromere complex assembly",3]
["centromeric sister chromatid cohesion",1]
["centrosome",5]
["centrosome cycle",4]
["centrosome duplication",4]
["centrosome separation",1]
["ceramide binding",1]
["ceramide biosynthetic process",4]
["ceramide catabolic process",1]
["ceramide metabolic process",5]
["ceramide transport",1]
["cerebral cortex neuron differentiation",1]
["channel activity",35]
["channel regulator activity",1]
["chaperone binding",4]
["chaperone cofactor-dependent protein refolding",4]
["chaperone complex",7]
["chaperone-mediated protein complex assembly",1]
["chaperone-mediated protein folding",20]
["chaperonin-containing T-complex",7]
["charged-tRNA amino acid modification",1]
["CHD-type complex",2]
["cheating during chimeric sorocarp development",1]
["checkpoint clamp complex",1]
["chemical homeostasis",58]
["chemical synaptic transmission",3]
["chemotaxis",10]
["chemotaxis to cAMP",1]
["chiasma",1]
["chiasma assembly",2]
["chimeric colonial development",1]
["chimeric non-reproductive fruiting body development",1]
["chimeric sorocarp development",1]
["chitin binding",1]
["chitin catabolic process",1]
["chitin metabolic process",1]
["chitinase activity",1]
["chloride channel activity",2]
["chloride transmembrane transport",2]
["chloride transmembrane transporter activity",2]
["chloride transport",2]
["chlorophyll binding",4]
["chlorophyll biosynthetic process",11]
["chlorophyll catabolic process",3]
["chlorophyll metabolic process",16]
["chlorophyll(ide) b reductase activity",1]
["chlorophyllide a oxygenase [overall] activity",1]
["chloroplast",478]
["chloroplast accumulation movement",1]
["chloroplast ATP synthase complex",1]
["chloroplast avoidance movement",3]
["chloroplast envelope",159]
["chloroplast fission",7]
["chloroplast inner membrane",23]
["chloroplast isoamylase complex",1]
["chloroplast localization",3]
["chloroplast membrane",41]
["chloroplast mRNA processing",1]
["chloroplast nucleoid",6]
["chloroplast organization",49]
["chloroplast outer membrane",14]
["chloroplast proton-transporting ATP synthase complex assembly",1]
["chloroplast relocation",3]
["chloroplast ribosome",1]
["chloroplast RNA modification",2]
["chloroplast RNA processing",2]
["chloroplast rRNA processing",2]
["chloroplast starch grain",3]
["chloroplast stroma",172]
["chloroplast stromal thylakoid",2]
["chloroplast thylakoid",81]
["chloroplast thylakoid lumen",2]
["chloroplast thylakoid membrane",61]
["chloroplast thylakoid membrane protein complex",5]
["chloroplast-nucleus signaling pathway",5]
["chloroplastic endopeptidase Clp complex",3]
["cholesterol binding",1]
["cholesterol biosynthetic process",1]
["cholesterol homeostasis",1]
["cholesterol metabolic process",1]
["cholesterol transport",1]
["choline biosynthetic process",1]
["choline metabolic process",1]
["choline transmembrane transporter activity",1]
["choline transport",1]
["chordate embryonic development",7]
["chorismate biosynthetic process",2]
["chorismate metabolic process",2]
["CHRAC",1]
["chromatin",61]
["chromatin assembly",7]
["chromatin assembly or disassembly",9]
["chromatin binding",22]
["chromatin disassembly",2]
["chromatin DNA binding",4]
["chromatin maintenance",1]
["chromatin organization",58]
["chromatin remodeling",18]
["chromatin silencing",10]
["chromatin silencing at telomere",1]
["chromatin silencing complex",3]
["chromatin-mediated maintenance of transcription",1]
["chromocenter",2]
["chromoplast",3]
["chromosomal region",22]
["chromosome",94]
["chromosome condensation",2]
["chromosome localization",11]
["chromosome movement towards spindle pole",4]
["chromosome organization",118]
["chromosome organization involved in meiotic cell cycle",8]
["chromosome passenger complex",1]
["chromosome segregation",35]
["chromosome separation",7]
["chromosome- centromeric region",12]
["chromosome- telomeric region",18]
["ciliary basal body",1]
["ciliary basal body-plasma membrane docking",1]
["ciliary base",2]
["ciliary membrane",1]
["ciliary plasm",6]
["ciliary pocket",1]
["ciliary pocket membrane",1]
["ciliary tip",1]
["ciliary transition zone",1]
["cilium",11]
["cilium assembly",9]
["cilium disassembly",1]
["cilium movement",4]
["cilium or flagellum-dependent cell motility",1]
["cilium organization",11]
["cilium-dependent cell motility",1]
["circadian regulation of calcium ion oscillation",1]
["circadian regulation of gene expression",2]
["circadian rhythm",16]
["circulatory system development",9]
["circumnutation",1]
["cis-Golgi network",1]
["cis-regulatory region sequence-specific DNA binding",3]
["cis-trans isomerase activity",20]
["citrate (Si)-synthase activity",1]
["citrate metabolic process",6]
["citrate synthase activity",1]
["citrate transmembrane transporter activity",1]
["citrate transport",1]
["clathrin adaptor complex",2]
["clathrin binding",4]
["clathrin coat",3]
["clathrin coat of coated pit",1]
["clathrin coat of endocytic vesicle",1]
["clathrin coat of trans-Golgi network vesicle",1]
["clathrin heavy chain binding",1]
["clathrin vesicle coat",3]
["clathrin-coated endocytic vesicle",1]
["clathrin-coated endocytic vesicle membrane",1]
["clathrin-coated pit",1]
["clathrin-coated vesicle",6]
["clathrin-coated vesicle cargo loading",1]
["clathrin-coated vesicle membrane",3]
["clathrin-dependent endocytosis",2]
["clathrin-dependent endocytosis involved in vitellogenesis",1]
["cleavage body",1]
["cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["cleavage involved in rRNA processing",10]
["cluster of actin-based cell projections",1]
["co-translational protein modification",1]
["CoA carboxylase activity",2]
["CoA-ligase activity",5]
["coagulation",3]
["coated membrane",8]
["coated vesicle",10]
["coated vesicle membrane",7]
["cobalt ion binding",8]
["cochlea development",1]
["coenzyme A biosynthetic process",1]
["coenzyme A metabolic process",1]
["coenzyme A transmembrane transport",1]
["coenzyme A transmembrane transporter activity",1]
["coenzyme A transport",1]
["cognition",3]
["cohesin complex",1]
["cold acclimation",5]
["columnar/cuboidal epithelial cell development",1]
["columnar/cuboidal epithelial cell differentiation",1]
["commitment complex",5]
["condensed chromosome",16]
["condensed chromosome- centromeric region",11]
["condensed nuclear chromosome",11]
["condensin complex",2]
["conidium development",1]
["conidium formation",1]
["conjugation",1]
["conjugation with cellular fusion",1]
["connective tissue development",1]
["contractile fiber",1]
["COP9 signalosome",1]
["COP9 signalosome assembly",2]
["COPI vesicle coat",1]
["COPI-coated vesicle",1]
["COPI-coated vesicle membrane",1]
["COPII vesicle coat",1]
["COPII-coated ER to Golgi transport vesicle",3]
["COPII-coated vesicle budding",1]
["COPII-coated vesicle cargo loading",1]
["copper ion binding",20]
["copper ion homeostasis",2]
["core mediator complex",4]
["core TFIIH complex portion of holo TFIIH complex",1]
["corolla development",2]
["cortical actin cytoskeleton",4]
["cortical actin cytoskeleton organization",1]
["cortical cytoskeleton",6]
["cortical cytoskeleton organization",10]
["cortical granule",1]
["cortical granule exocytosis",1]
["cortical microtubule",2]
["cortical microtubule cytoskeleton",2]
["cortical microtubule organization",8]
["cortical microtubule- transverse to long axis",1]
["CORVET complex",5]
["cotranslational protein targeting to membrane",1]
["cotyledon development",6]
["cotyledon morphogenesis",4]
["cotyledon vascular tissue pattern formation",4]
["coumarin biosynthetic process",1]
["coumarin metabolic process",1]
["courtship behavior",1]
["covalent chromatin modification",34]
["cranial skeletal system development",1]
["CRD-mediated mRNA stability complex",1]
["CRD-mediated mRNA stabilization",1]
["cristae formation",1]
["Ctf18 RFC-like complex",4]
["Cul3-RING ubiquitin ligase complex",3]
["Cul4-RING E3 ubiquitin ligase complex",19]
["Cul4A-RING E3 ubiquitin ligase complex",2]
["Cul4B-RING E3 ubiquitin ligase complex",2]
["cullin-RING ubiquitin ligase complex",31]
["culmination involved in sorocarp development",1]
["CUT catabolic process",4]
["CUT metabolic process",4]
["cuticle development",9]
["cuticle hydrocarbon biosynthetic process",2]
["cutin biosynthetic process",3]
["cutin transport",1]
["cyclase activity",3]
["cyclic nucleotide-gated ion channel activity",2]
["cyclic-nucleotide-mediated signaling",1]
["cyclin binding",2]
["cyclin-dependent protein kinase activity",6]
["cyclin-dependent protein kinase holoenzyme complex",2]
["cyclin-dependent protein serine/threonine kinase activity",6]
["cyclin-dependent protein serine/threonine kinase regulator activity",2]
["cyclo-ligase activity",1]
["cyclohydrolase activity",3]
["cyclosporin A binding",2]
["cystathionine beta-lyase activity",1]
["cystathionine gamma-lyase activity",2]
["cystathionine gamma-synthase activity",3]
["cysteine biosynthetic process",3]
["cysteine biosynthetic process via cystathionine",1]
["cysteine catabolic process",1]
["cysteine desulfurase activity",1]
["cysteine metabolic process",4]
["cysteine-S-conjugate beta-lyase activity",1]
["cysteine-type endopeptidase activity",5]
["cysteine-type peptidase activity",9]
["cytidine catabolic process",1]
["cytidine deaminase activity",1]
["cytidine deamination",1]
["cytidine metabolic process",2]
["cytidine to uridine editing",1]
["cytidylyltransferase activity",2]
["cytochrome b6f complex assembly",3]
["cytochrome complex",1]
["cytochrome complex assembly",5]
["cytochrome-b5 reductase activity- acting on NAD(P)H",1]
["cytochrome-c peroxidase activity",4]
["cytokine binding",1]
["cytokinesis",20]
["cytokinesis by cell plate formation",10]
["cytokinetic process",11]
["cytokinin catabolic process",2]
["cytokinin dehydrogenase activity",2]
["cytokinin metabolic process",4]
["cytokinin-activated signaling pathway",5]
["cytoplasm",1492]
["cytoplasm organization",1]
["cytoplasm to vacuole transport by the Cvt pathway",3]
["cytoplasmic chromosome",6]
["cytoplasmic exosome (RNase complex)",5]
["cytoplasmic microtubule",2]
["cytoplasmic microtubule depolymerization",1]
["cytoplasmic microtubule organization",12]
["cytoplasmic region",19]
["cytoplasmic ribonucleoprotein granule",16]
["cytoplasmic RNA surveillance",1]
["cytoplasmic side of endoplasmic reticulum membrane",4]
["cytoplasmic side of endosome membrane",1]
["cytoplasmic side of membrane",8]
["cytoplasmic side of plasma membrane",3]
["cytoplasmic side of rough endoplasmic reticulum membrane",1]
["cytoplasmic stress granule",6]
["cytoplasmic translation",9]
["cytoplasmic translational initiation",4]
["cytoplasmic translational termination",1]
["cytoplasmic ubiquitin ligase complex",1]
["cytoplasmic vesicle",117]
["cytoplasmic vesicle lumen",1]
["cytoplasmic vesicle membrane",13]
["cytosine metabolic process",1]
["cytoskeletal protein binding",34]
["cytoskeleton",64]
["cytoskeleton organization",64]
["cytoskeleton-dependent cytokinesis",19]
["cytoskeleton-dependent intracellular transport",7]
["cytosol",371]
["cytosol to endoplasmic reticulum transport",1]
["cytosolic calcium ion transport",1]
["cytosolic large ribosomal subunit",6]
["cytosolic proteasome complex",3]
["cytosolic ribosome",20]
["cytosolic small ribosomal subunit",7]
["cytosolic transport",11]
["D-amino acid biosynthetic process",1]
["D-amino acid metabolic process",1]
["D-arabinose 1-dehydrogenase [NAD(P)+] activity",1]
["D-cysteine desulfhydrase activity",1]
["D-erythro-sphingosine kinase activity",3]
["D-lactate dehydrogenase (cytochrome) activity",2]
["D-lactate dehydrogenase activity",1]
["D-serine ammonia-lyase activity",1]
["D-serine biosynthetic process",1]
["D-serine metabolic process",1]
["D-xylose metabolic process",1]
["damaged DNA binding",13]
["dauer entry",1]
["dauer larval development",1]
["Dcp1-Dcp2 complex",1]
["de-etiolation",2]
["deacetylase activity",1]
["DEAD/H-box RNA helicase binding",1]
["deadenylation-dependent decapping of nuclear-transcribed mRNA",4]
["deadenylation-independent decapping of nuclear-transcribed mRNA",2]
["deaminase activity",2]
["defense response",98]
["defense response by callose deposition",5]
["defense response by callose deposition in cell wall",5]
["defense response by cell wall thickening",5]
["defense response to bacterium",57]
["defense response to fungus",36]
["defense response to Gram-negative bacterium",1]
["defense response to insect",1]
["defense response to oomycetes",1]
["defense response to other organism",109]
["defense response to virus",4]
["dehiscence",5]
["dehydro-D-arabinono-1-4-lactone biosynthetic process",1]
["dehydro-D-arabinono-1-4-lactone metabolic process",1]
["delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity",1]
["delta DNA polymerase complex",2]
["delta14-sterol reductase activity",1]
["delta3-5-delta2-4-dienoyl-CoA isomerase activity",1]
["demethylase activity",2]
["demethylation",7]
["dendrite",1]
["dendrite development",2]
["dendrite morphogenesis",1]
["dendritic shaft",1]
["dendritic spine",1]
["dendritic tree",1]
["dense core granule maturation",1]
["deoxycytidine deaminase activity",1]
["deoxycytidine kinase activity",1]
["deoxyhypusine monooxygenase activity",1]
["deoxyhypusine synthase activity",1]
["deoxynucleoside kinase activity",2]
["deoxyribodipyrimidine photo-lyase activity",1]
["deoxyribonuclease activity",10]
["deoxyribonucleoside metabolic process",1]
["deoxyribonucleoside monophosphate biosynthetic process",2]
["deoxyribonucleoside monophosphate metabolic process",2]
["deoxyribonucleotide catabolic process",1]
["deoxyribonucleotide metabolic process",1]
["deoxyribose phosphate catabolic process",1]
["deoxyribose phosphate metabolic process",1]
["dephosphorylation",54]
["depurination",1]
["depyrimidination",1]
["Derlin-1 retrotranslocation complex",3]
["detection of abiotic stimulus",8]
["detection of brassinosteroid stimulus",1]
["detection of chemical stimulus",5]
["detection of endogenous stimulus",3]
["detection of ethylene stimulus",2]
["detection of external stimulus",8]
["detection of gravity",2]
["detection of hormone stimulus",3]
["detection of light stimulus",3]
["detection of mechanical stimulus",3]
["detection of nutrient",1]
["detection of oxidative stress",1]
["detection of phosphate ion",1]
["detection of stimulus",15]
["determination of bilateral symmetry",4]
["determination of digestive tract left/right asymmetry",1]
["determination of heart left/right asymmetry",1]
["determination of left/right symmetry",3]
["determination of liver left/right asymmetry",1]
["determination of pancreatic left/right asymmetry",1]
["dethiobiotin synthase activity",1]
["detoxification",15]
["detoxification of cadmium ion",1]
["detoxification of inorganic compound",1]
["deubiquitinase activator activity",1]
["deubiquitinase activity",2]
["development of primary female sexual characteristics",1]
["development of primary sexual characteristics",2]
["developmental cell growth",20]
["developmental growth",57]
["developmental growth involved in morphogenesis",48]
["developmental induction",1]
["developmental maturation",29]
["developmental process",464]
["developmental process involved in reproduction",196]
["developmental vegetative growth",2]
["diacylglycerol biosynthetic process",2]
["diacylglycerol catabolic process",2]
["diacylglycerol cholinephosphotransferase activity",1]
["diacylglycerol kinase activity",2]
["diacylglycerol metabolic process",4]
["diadenosine polyphosphate biosynthetic process",1]
["diadenosine polyphosphate metabolic process",1]
["diadenosine tetraphosphate biosynthetic process",1]
["diadenosine tetraphosphate metabolic process",1]
["dicarboxylic acid biosynthetic process",4]
["dicarboxylic acid catabolic process",3]
["dicarboxylic acid metabolic process",18]
["dicarboxylic acid transmembrane transporter activity",4]
["dicarboxylic acid transport",4]
["digestive system development",1]
["digestive tract development",1]
["dihydrobiopterin metabolic process",1]
["dihydrofolate biosynthetic process",1]
["dihydrofolate metabolic process",1]
["dihydrofolate synthase activity",1]
["dihydrokaempferol 4-reductase activity",1]
["dihydrolipoamide branched chain acyltransferase activity",1]
["dihydrolipoamide S-acyltransferase activity",1]
["dihydrolipoyl dehydrogenase activity",1]
["dihydrolipoyl dehydrogenase complex",2]
["dihydroorotase activity",1]
["dihydroorotate dehydrogenase activity",1]
["dihydropteroate synthase activity",1]
["dihydropyrimidinase activity",1]
["dihydropyrimidine dehydrogenase (NADP+) activity",1]
["dihydrouracil dehydrogenase (NAD+) activity",1]
["dihydroxy-acid dehydratase activity",1]
["dimethylallyltranstransferase activity",1]
["diol biosynthetic process",5]
["diol metabolic process",5]
["dioxygenase activity",8]
["dipeptidase activity",1]
["dipeptidyl-peptidase activity",2]
["diphosphate-fructose-6-phosphate 1-phosphotransferase activity",1]
["diphosphomevalonate decarboxylase activity",1]
["diphosphoric monoester hydrolase activity",1]
["diphosphotransferase activity",6]
["diphthine synthase activity",1]
["disaccharide biosynthetic process",5]
["disaccharide catabolic process",7]
["disaccharide metabolic process",15]
["disaccharide transmembrane transporter activity",2]
["disaccharide transport",3]
["disordered domain specific binding",2]
["disruption by organism of cellular component in other organism involved in symbiotic interaction",1]
["disruption by symbiont of host cellular component",1]
["distal axon",3]
["disulfide oxidoreductase activity",6]
["diterpene phytoalexin biosynthetic process",1]
["diterpene phytoalexin metabolic process",1]
["diterpenoid biosynthetic process",6]
["diterpenoid metabolic process",6]
["divalent inorganic anion homeostasis",4]
["divalent inorganic cation homeostasis",9]
["division septum",2]
["DNA (6-4) photolyase activity",1]
["DNA (cytosine-5-)-methyltransferase activity",1]
["DNA alkylation",6]
["DNA amplification",1]
["DNA binding",110]
["DNA biosynthetic process",14]
["DNA catabolic process",1]
["DNA clamp loader activity",2]
["DNA conformation change",32]
["DNA damage checkpoint signaling",9]
["DNA damage response- detection of DNA damage",2]
["DNA damage response- signal transduction by p53 class mediator",2]
["DNA damage response- signal transduction by p53 class mediator resulting in cell cycle arrest",1]
["DNA dealkylation",3]
["DNA deamination",1]
["DNA demethylation",3]
["DNA double-strand break processing",2]
["DNA duplex unwinding",18]
["DNA endoreduplication",3]
["DNA geometric change",19]
["DNA helicase activity",20]
["DNA helicase complex",1]
["DNA insertion or deletion binding",2]
["DNA integration",1]
["DNA integrity checkpoint signaling",10]
["DNA ligase (ATP) activity",1]
["DNA ligase activity",1]
["DNA ligation",1]
["DNA ligation involved in DNA repair",1]
["DNA mediated transformation",4]
["DNA metabolic process",116]
["DNA methylation",6]
["DNA methylation on adenine",1]
["DNA methylation on cytosine",2]
["DNA methylation on cytosine within a CG sequence",1]
["DNA methylation on cytosine within a CNG sequence",1]
["DNA methylation or demethylation",8]
["DNA modification",10]
["DNA N-glycosylase activity",3]
["DNA packaging",11]
["DNA packaging complex",1]
["DNA photolyase activity",2]
["DNA polymerase activity",3]
["DNA polymerase binding",1]
["DNA polymerase complex",3]
["DNA primase activity",2]
["DNA recombinase assembly",4]
["DNA recombinase mediator complex",1]
["DNA recombination",31]
["DNA repair",77]
["DNA repair complex",8]
["DNA repair complex assembly",4]
["DNA replication",35]
["DNA replication checkpoint signaling",1]
["DNA replication factor C complex",5]
["DNA replication initiation",5]
["DNA replication origin binding",6]
["DNA replication preinitiation complex",4]
["DNA replication preinitiation complex assembly",1]
["DNA replication proofreading",1]
["DNA replication- Okazaki fragment processing",1]
["DNA replication- removal of RNA primer",1]
["DNA replication- synthesis of RNA primer",2]
["DNA replication-independent nucleosome assembly",2]
["DNA replication-independent nucleosome organization",2]
["DNA rewinding",1]
["DNA secondary structure binding",6]
["DNA strand elongation",3]
["DNA strand elongation involved in DNA replication",3]
["DNA strand exchange activity",4]
["DNA synthesis involved in DNA repair",8]
["DNA topoisomerase activity",3]
["DNA topoisomerase binding",1]
["DNA topoisomerase type I (single strand cut- ATP-independent) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activator activity",1]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) activity",2]
["DNA topoisomerase type II (double strand cut- ATP-hydrolyzing) regulator activity",1]
["DNA topological change",2]
["DNA translocase activity",2]
["DNA unwinding involved in DNA replication",5]
["DNA-(apurinic or apyrimidinic site) endonuclease activity",2]
["DNA-binding transcription activator activity- RNA polymerase II-specific",1]
["DNA-binding transcription factor activity",55]
["DNA-binding transcription factor activity- RNA polymerase II-specific",9]
["DNA-binding transcription factor binding",4]
["DNA-binding transcription repressor activity- RNA polymerase II-specific",2]
["DNA-dependent DNA replication",33]
["DNA-dependent DNA replication maintenance of fidelity",3]
["DNA-directed 5'-3' RNA polymerase activity",5]
["DNA-directed DNA polymerase activity",3]
["DNA-directed RNA polymerase complex",21]
["DNA-methyltransferase activity",2]
["DNA-N1-methyladenine dioxygenase activity",1]
["DNA-templated transcription- elongation",3]
["DNA-templated transcription- initiation",8]
["DNA-templated transcription- termination",3]
["dodecenoyl-CoA delta-isomerase activity",2]
["dolichol kinase activity",1]
["dolichol-linked oligosaccharide biosynthetic process",4]
["dolichyl diphosphate biosynthetic process",2]
["dolichyl diphosphate metabolic process",2]
["dolichyl monophosphate biosynthetic process",1]
["dolichyl pyrophosphate Man9GlcNAc2 alpha-1-3-glucosyltransferase activity",2]
["dolichyl-diphosphooligosaccharide-protein glycotransferase activity",3]
["dolichyl-phosphate beta-D-mannosyltransferase activity",1]
["dolichyldiphosphatase activity",1]
["dormancy process",3]
["dorsal/ventral pattern formation",2]
["dorsal/ventral pattern formation- imaginal disc",1]
["dosage compensation",2]
["dosage compensation by inactivation of X chromosome",2]
["double fertilization forming a zygote and endosperm",4]
["double-strand break repair",29]
["double-strand break repair via break-induced replication",1]
["double-strand break repair via homologous recombination",15]
["double-strand break repair via nonhomologous end joining",8]
["double-strand break repair via synthesis-dependent strand annealing",5]
["double-strand/single-strand DNA junction binding",1]
["double-stranded DNA 3'-5' exodeoxyribonuclease activity",1]
["double-stranded DNA binding",33]
["double-stranded DNA exodeoxyribonuclease activity",1]
["double-stranded RNA binding",2]
["double-stranded telomeric DNA binding",3]
["drought recovery",1]
["drug binding",57]
["drug catabolic process",20]
["drug metabolic process",95]
["drug transmembrane transport",19]
["drug transport",21]
["dsRNA processing",9]
["dsRNA transport",2]
["dynein complex binding",2]
["ear development",2]
["ear morphogenesis",1]
["early endosome",22]
["early endosome membrane",5]
["early endosome to late endosome transport",3]
["early phagosome",1]
["early phagosome membrane",1]
["EARP complex",1]
["ectodermal placode development",1]
["ectodermal placode formation",1]
["ectodermal placode morphogenesis",1]
["efflux transmembrane transporter activity",4]
["egg activation",1]
["eggshell formation",1]
["EKC/KEOPS complex",2]
["electron transfer activity",4]
["electron transfer flavoprotein complex",1]
["electron transport chain",19]
["electron transporter- transferring electrons within the cyclic electron transport pathway of photosynthesis activity",1]
["electron transporter- transferring electrons within the noncyclic electron transport pathway of photosynthesis activity",1]
["electron-transferring-flavoprotein dehydrogenase activity",1]
["elongator holoenzyme complex",2]
["embryo development",108]
["embryo development ending in birth or egg hatching",12]
["embryo development ending in seed dormancy",83]
["embryo sac cellularization",1]
["embryo sac central cell differentiation",3]
["embryo sac development",24]
["embryonic appendage morphogenesis",3]
["embryonic axis specification",4]
["embryonic cranial skeleton morphogenesis",1]
["embryonic development via the syncytial blastoderm",1]
["embryonic digit morphogenesis",2]
["embryonic epithelial tube formation",1]
["embryonic heart tube development",1]
["embryonic heart tube morphogenesis",1]
["embryonic limb morphogenesis",2]
["embryonic meristem development",9]
["embryonic meristem initiation",6]
["embryonic morphogenesis",17]
["embryonic neurocranium morphogenesis",1]
["embryonic organ development",3]
["embryonic organ morphogenesis",3]
["embryonic pattern specification",8]
["embryonic pectoral fin morphogenesis",1]
["embryonic shoot morphogenesis",1]
["embryonic skeletal system development",1]
["embryonic skeletal system morphogenesis",1]
["EMC complex",1]
["endo-1-4-beta-xylanase activity",1]
["endocytic patch",3]
["endocytic recycling",5]
["endocytic vesicle",6]
["endocytic vesicle membrane",2]
["endocytosis",17]
["endodeoxyribonuclease activity",7]
["endodeoxyribonuclease activity- producing 3'-phosphomonoesters",2]
["endodeoxyribonuclease activity- producing 5'-phosphomonoesters",2]
["endoderm development",3]
["endoderm formation",3]
["endodermal cell differentiation",1]
["endodermal cell fate commitment",1]
["endomembrane system",380]
["endomembrane system organization",19]
["endonuclease activity",37]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters",2]
["endonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",4]
["endonuclease complex",1]
["endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",3]
["endonucleolytic cleavage involved in rRNA processing",6]
["endonucleolytic cleavage involved in tRNA processing",1]
["endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",5]
["endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",1]
["endopeptidase activator activity",1]
["endopeptidase activity",23]
["endopeptidase Clp complex",3]
["endopeptidase complex",20]
["endopeptidase inhibitor activity",1]
["endopeptidase regulator activity",2]
["endoplasmic reticulum",174]
["endoplasmic reticulum calcium ion homeostasis",1]
["endoplasmic reticulum chaperone complex",1]
["endoplasmic reticulum exit site",1]
["endoplasmic reticulum lumen",8]
["endoplasmic reticulum membrane",74]
["endoplasmic reticulum membrane organization",1]
["endoplasmic reticulum organization",4]
["endoplasmic reticulum palmitoyltransferase complex",2]
["endoplasmic reticulum quality control compartment",1]
["endoplasmic reticulum Sec complex",1]
["endoplasmic reticulum stress-induced pre-emptive quality control",1]
["endoplasmic reticulum subcompartment",75]
["endoplasmic reticulum to cytosol transport",2]
["endoplasmic reticulum to Golgi vesicle-mediated transport",8]
["endoplasmic reticulum tubular network",1]
["endoplasmic reticulum unfolded protein response",7]
["endoribonuclease activity",7]
["endoribonuclease activity- producing 5'-phosphomonoesters",2]
["endoribonuclease complex",1]
["endosomal transport",17]
["endosomal vesicle fusion",2]
["endosome",94]
["endosome membrane",25]
["endosome organization",3]
["endosome to lysosome transport",8]
["endosome to lysosome transport via multivesicular body sorting pathway",3]
["endosome transport via multivesicular body sorting pathway",6]
["endosperm development",3]
["endothelial cell development",1]
["endothelial cell differentiation",1]
["endothelial cell morphogenesis",1]
["endothelium development",1]
["energy coupled proton transport- down electrochemical gradient",1]
["energy derivation by oxidation of organic compounds",31]
["energy homeostasis",1]
["energy quenching",1]
["energy reserve metabolic process",13]
["enone reductase activity",1]
["enoyl-CoA hydratase activity",5]
["ensheathment of neurons",2]
["ent-cassa-12-15-diene 11-hydroxylase activity",1]
["ent-kaurenoate oxidase activity",1]
["enteric nervous system development",1]
["entrainment of circadian clock",2]
["entry into diapause",1]
["envelope",246]
["enzyme activator activity",22]
["enzyme binding",87]
["enzyme inhibitor activity",8]
["enzyme linked receptor protein signaling pathway",15]
["enzyme regulator activity",46]
["enzyme-directed rRNA 2'-O-methylation",1]
["enzyme-directed rRNA pseudouridine synthesis",3]
["epidermal cell differentiation",2]
["epidermal cell fate specification",1]
["epidermal growth factor catabolic process",1]
["epidermal stem cell homeostasis",1]
["epidermis development",3]
["epithelial cell development",2]
["epithelial cell differentiation",5]
["epithelial cell differentiation involved in prostate gland development",1]
["epithelial cell migration",1]
["epithelial cell morphogenesis",1]
["epithelial cilium movement involved in determination of left/right asymmetry",1]
["epithelial cilium movement involved in extracellular fluid movement",1]
["epithelial tube formation",1]
["epithelial tube morphogenesis",4]
["epithelium development",13]
["epithelium migration",1]
["epoxide hydrolase activity",1]
["epsilon DNA polymerase complex",1]
["equatorial cell cortex",1]
["equatorial microtubule organizing center",1]
["ER body organization",1]
["ER overload response",1]
["ER to Golgi transport vesicle membrane",3]
["ER ubiquitin ligase complex",1]
["ER-associated misfolded protein catabolic process",2]
["ER-nucleus signaling pathway",2]
["ERAD pathway",14]
["ERCC4-ERCC1 complex",1]
["error-free translesion synthesis",2]
["error-prone translesion synthesis",4]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process",2]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process",1]
["erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",4]
["ESC/E(Z) complex",1]
["ESCRT complex",5]
["ESCRT I complex",1]
["ESCRT II complex",2]
["ESCRT III complex",2]
["establishment of cell polarity",3]
["establishment of chromosome localization",10]
["establishment of localization",347]
["establishment of localization in cell",133]
["establishment of mitochondrion localization",3]
["establishment of mitochondrion localization- microtubule-mediated",3]
["establishment of mitotic spindle localization",1]
["establishment of organelle localization",21]
["establishment of planar polarity",1]
["establishment of plastid localization",3]
["establishment of protein localization",99]
["establishment of protein localization to chloroplast",9]
["establishment of protein localization to endoplasmic reticulum",4]
["establishment of protein localization to membrane",11]
["establishment of protein localization to mitochondrial membrane",1]
["establishment of protein localization to mitochondrion",8]
["establishment of protein localization to organelle",52]
["establishment of protein localization to peroxisome",5]
["establishment of protein localization to plasma membrane",1]
["establishment of protein localization to vacuole",12]
["establishment of protein-containing complex localization to telomere",1]
["establishment of RNA localization",22]
["establishment of spindle localization",1]
["establishment of synaptic vesicle localization",1]
["establishment of tissue polarity",1]
["establishment of vesicle localization",3]
["establishment or maintenance of cell polarity",5]
["establishment or maintenance of cytoskeleton polarity",1]
["establishment or maintenance of microtubule cytoskeleton polarity",1]
["ethanolamine-containing compound metabolic process",1]
["ether hydrolase activity",1]
["ethylene binding",2]
["ethylene biosynthetic process",1]
["ethylene metabolic process",1]
["ethylene receptor activity",2]
["ethylene-activated signaling pathway",14]
["etioplast organization",2]
["euchromatin",3]
["eukaryotic 48S preinitiation complex",2]
["eukaryotic translation initiation factor 2 complex",1]
["eukaryotic translation initiation factor 2B complex",5]
["eukaryotic translation initiation factor 3 complex",6]
["eukaryotic translation initiation factor 3 complex- eIF3m",1]
["excretion",1]
["exit from host",1]
["exit from host cell",1]
["exit from mitosis",3]
["exocrine system development",1]
["exocyst",3]
["exocyst assembly",1]
["exocyst localization",1]
["exocytic process",3]
["exocytic vesicle",3]
["exocytic vesicle membrane",2]
["exocytosis",15]
["exodeoxyribonuclease activity",4]
["exodeoxyribonuclease activity- producing 5'-phosphomonoesters",4]
["exon-exon junction complex",1]
["exonuclease activity",20]
["exonuclease activity- active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",13]
["exonucleolytic catabolism of deadenylated mRNA",6]
["exonucleolytic trimming involved in rRNA processing",3]
["exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",3]
["exopeptidase activity",11]
["exoribonuclease activity",9]
["exoribonuclease activity- producing 5'-phosphomonoesters",9]
["exoribonuclease complex",10]
["exosomal secretion",1]
["exosome (RNase complex)",10]
["exploration behavior",1]
["export across plasma membrane",1]
["external encapsulating structure",66]
["external encapsulating structure organization",34]
["external side of cell wall",1]
["external side of plasma membrane",2]
["extracellular exosome",1]
["extracellular exosome biogenesis",1]
["extracellular matrix",1]
["extracellular matrix assembly",11]
["extracellular matrix disassembly",1]
["extracellular matrix organization",13]
["extracellular organelle",1]
["extracellular region",70]
["extracellular space",11]
["extracellular structure organization",13]
["extracellular vesicle",1]
["extracellular vesicle biogenesis",1]
["extrinsic component of cytoplasmic side of plasma membrane",3]
["extrinsic component of endoplasmic reticulum membrane",1]
["extrinsic component of endosome membrane",1]
["extrinsic component of lysosome membrane",1]
["extrinsic component of membrane",16]
["extrinsic component of mitochondrial inner membrane",1]
["extrinsic component of organelle membrane",4]
["extrinsic component of plasma membrane",3]
["extrinsic component of vacuolar membrane",1]
["eye development",2]
["eyelid development in camera-type eye",1]
["FAD binding",2]
["FAD biosynthetic process",1]
["FAD diphosphatase activity",1]
["FAD metabolic process",2]
["FAD transmembrane transport",1]
["FAD transmembrane transporter activity",1]
["farnesyl diphosphate biosynthetic process",1]
["farnesyl diphosphate metabolic process",3]
["farnesyl-diphosphate farnesyltransferase activity",1]
["farnesyltranstransferase activity",3]
["fat-soluble vitamin biosynthetic process",5]
["fat-soluble vitamin metabolic process",5]
["fatty acid beta-oxidation",13]
["fatty acid beta-oxidation using acyl-CoA dehydrogenase",4]
["fatty acid binding",1]
["fatty acid biosynthetic process",15]
["fatty acid catabolic process",14]
["fatty acid derivative binding",1]
["fatty acid derivative biosynthetic process",7]
["fatty acid derivative catabolic process",1]
["fatty acid derivative metabolic process",11]
["fatty acid derivative transport",1]
["fatty acid elongase activity",2]
["fatty acid elongase complex",1]
["fatty acid elongation",2]
["fatty acid homeostasis",1]
["fatty acid in-chain hydroxylase activity",2]
["fatty acid ligase activity",3]
["fatty acid metabolic process",41]
["fatty acid omega-oxidation",1]
["fatty acid oxidation",14]
["fatty acid synthase activity",5]
["fatty acid transmembrane transporter activity",2]
["fatty acid transport",4]
["fatty-acyl-CoA binding",1]
["fatty-acyl-CoA biosynthetic process",1]
["fatty-acyl-CoA catabolic process",1]
["fatty-acyl-CoA metabolic process",3]
["fatty-acyl-CoA reductase (alcohol-forming) activity",1]
["female gamete generation",6]
["female gonad development",1]
["female mating behavior",1]
["female meiosis chromosome segregation",1]
["female meiotic nuclear division",2]
["female sex differentiation",1]
["ferric iron binding",2]
["ferric-chelate reductase activity",1]
["ferrous iron binding",2]
["ferroxidase activity",1]
["fertilization",5]
["fibrillar center",1]
["ficolin-1-rich granule",1]
["ficolin-1-rich granule lumen",1]
["fin development",2]
["fin morphogenesis",2]
["fin regeneration",1]
["FK506 binding",6]
["flagellated sperm motility",1]
["flap endonuclease activity",2]
["flap-structured DNA binding",1]
["flavin adenine dinucleotide binding",10]
["flavin adenine dinucleotide biosynthetic process",1]
["flavin adenine dinucleotide catabolic process",1]
["flavin adenine dinucleotide metabolic process",4]
["flavin-containing compound biosynthetic process",5]
["flavin-containing compound catabolic process",1]
["flavin-containing compound metabolic process",9]
["flavone biosynthetic process",1]
["flavone metabolic process",1]
["flavonoid biosynthetic process",6]
["flavonoid metabolic process",9]
["flavonoid transport from endoplasmic reticulum to plant-type vacuole",1]
["flavonol biosynthetic process",1]
["flavonol metabolic process",1]
["flavonol synthase activity",1]
["floral meristem determinacy",1]
["floral organ abscission",2]
["floral organ development",35]
["floral organ formation",6]
["floral organ morphogenesis",9]
["floral whorl development",28]
["flower calyx development",2]
["flower development",51]
["flower morphogenesis",1]
["fluid transport",3]
["FMN adenylyltransferase activity",2]
["FMN binding",1]
["FMN hydrolase activity",1]
["FMN transmembrane transporter activity",1]
["FMN-binding domain binding",1]
["folic acid transmembrane transporter activity",1]
["folic acid transport",1]
["folic acid-containing compound biosynthetic process",3]
["folic acid-containing compound metabolic process",4]
["forebrain development",5]
["forebrain morphogenesis",1]
["formation of anatomical boundary",2]
["formation of plant organ boundary",2]
["formation of primary germ layer",4]
["formation of translation preinitiation complex",1]
["four-way junction DNA binding",5]
["four-way junction helicase activity",3]
["fructokinase activity",1]
["fructosamine metabolic process",1]
["fructose 1-6-bisphosphate 1-phosphatase activity",3]
["fructose 1-6-bisphosphate metabolic process",3]
["fructose 6-phosphate metabolic process",3]
["fructose export from vacuole to cytoplasm",1]
["fructose metabolic process",4]
["fructose transmembrane transport",1]
["fructose transmembrane transporter activity",1]
["fructose-bisphosphate aldolase activity",2]
["fruit dehiscence",1]
["fruit development",108]
["fruit morphogenesis",2]
["fucose catabolic process",1]
["fucose metabolic process",1]
["fucosidase activity",1]
["fucosylation",2]
["fucosyltransferase activity",2]
["fumarate hydratase activity",1]
["fumarate metabolic process",1]
["fumarate reductase complex",1]
["fumarylacetoacetase activity",1]
["fumarylpyruvate hydrolase activity",1]
["fungal biofilm matrix",1]
["fungal-type cell wall",2]
["fungal-type cell wall disassembly",1]
["fungal-type cell wall disassembly involved in conjugation with cellular fusion",1]
["fungal-type cell wall organization",1]
["fungal-type cell wall organization or biogenesis",1]
["fungal-type vacuole",5]
["fungal-type vacuole membrane",3]
["fungiform papilla development",1]
["fungiform papilla formation",1]
["fungiform papilla morphogenesis",1]
["fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm",1]
["G protein-coupled receptor activity",2]
["G protein-coupled receptor binding",3]
["G protein-coupled receptor signaling pathway",7]
["G protein-coupled receptor signaling pathway- coupled to cyclic nucleotide second messenger",3]
["G-protein beta/gamma-subunit complex binding",1]
["G-quadruplex DNA binding",1]
["G-rich single-stranded DNA binding",1]
["G1/S transition of mitotic cell cycle",3]
["G2/M transition of mitotic cell cycle",3]
["GAIT complex",2]
["galactokinase activity",1]
["galactolipase activity",1]
["galactolipid biosynthetic process",4]
["galactolipid metabolic process",5]
["galactonolactone dehydrogenase activity",1]
["galactose catabolic process",2]
["galactose metabolic process",3]
["galactose-1-phosphate phosphatase activity",1]
["galactosidase activity",4]
["galactosyltransferase activity",13]
["galactosylxylosylprotein 3-beta-galactosyltransferase activity",1]
["galacturonan metabolic process",11]
["gamete generation",23]
["gametophyte development",70]
["gamma-aminobutyric acid catabolic process",2]
["gamma-aminobutyric acid metabolic process",2]
["gamma-secretase complex",1]
["gamma-tubulin binding",1]
["gamma-tubulin complex",1]
["gamma-tubulin complex localization",1]
["gamma-tubulin small complex",1]
["ganglioside binding",1]
["ganglioside GM1 binding",1]
["ganglioside GM1 transport to membrane",1]
["ganglioside GM2 binding",1]
["ganglioside GM3 binding",1]
["ganglioside GP1c binding",1]
["ganglioside GT1b binding",1]
["GARP complex",2]
["gastrulation",5]
["gated channel activity",15]
["GDP binding",3]
["GDP biosynthetic process",1]
["GDP metabolic process",1]
["GDP-dissociation inhibitor activity",1]
["GDP-fucose transmembrane transport",3]
["GDP-fucose transmembrane transporter activity",3]
["GDP-L-fucose biosynthetic process",1]
["GDP-L-fucose metabolic process",1]
["GDP-Man:Man3GlcNAc2-PP-Dol alpha-1-2-mannosyltransferase activity",2]
["GDP-mannose 4-6-dehydratase activity",1]
["GDP-mannose transmembrane transport",1]
["GDP-mannose transmembrane transporter activity",1]
["Gemini of coiled bodies",1]
["gene conversion",4]
["gene expression",246]
["gene silencing",27]
["gene silencing by miRNA",9]
["gene silencing by RNA",19]
["gene silencing by RNA-directed DNA methylation",1]
["generation of catalytic spliceosome for first transesterification step",2]
["generation of neurons",14]
["generation of precursor metabolites and energy",70]
["generative cell differentiation",1]
["genetic imprinting",4]
["genetic transfer",4]
["geranylgeranyl diphosphate metabolic process",1]
["geranylgeranyl reductase activity",1]
["geranylgeranyl-diphosphate geranylgeranyltransferase activity",1]
["geranyltranstransferase activity",2]
["germ cell development",6]
["germ cell migration",1]
["germ plasm",1]
["germ-line stem-cell niche homeostasis",1]
["germline cell cycle switching- mitotic to meiotic cell cycle",1]
["gibberellic acid homeostasis",1]
["gibberellic acid mediated signaling pathway",4]
["gibberellin 20-oxidase activity",1]
["gibberellin binding",1]
["gibberellin biosynthetic process",5]
["gibberellin mediated signaling pathway",5]
["gibberellin metabolic process",5]
["GID complex",1]
["gland development",4]
["glial cell development",2]
["glial cell differentiation",4]
["glial cell migration",1]
["glial cell proliferation",1]
["gliogenesis",4]
["global genome nucleotide-excision repair",3]
["glucan 1-3-alpha-glucosidase activity",1]
["glucan biosynthetic process",15]
["glucan catabolic process",15]
["glucan endo-1-3-beta-D-glucosidase activity",2]
["glucan metabolic process",36]
["gluconeogenesis",7]
["glucosamine-containing compound catabolic process",1]
["glucosamine-containing compound metabolic process",1]
["glucose 6-phosphate metabolic process",4]
["glucose binding",1]
["glucose catabolic process",1]
["glucose catabolic process to pyruvate",1]
["glucose import",5]
["glucose metabolic process",12]
["glucose transmembrane transport",6]
["glucose transmembrane transporter activity",6]
["glucose-1-phosphate adenylyltransferase activity",1]
["glucose-6-phosphate dehydrogenase activity",2]
["glucose-6-phosphate isomerase activity",1]
["glucosidase activity",6]
["glucoside transmembrane transporter activity",1]
["glucoside transport",1]
["glucosinolate biosynthetic process",3]
["glucosinolate biosynthetic process from homomethionine",1]
["glucosinolate catabolic process",3]
["glucosinolate metabolic process",7]
["glucosyltransferase activity",10]
["glucuronate-1-phosphate uridylyltransferase activity",1]
["glucuronosyltransferase activity",4]
["glucuronoxylan biosynthetic process",3]
["glucuronoxylan glucuronosyltransferase activity",1]
["glucuronoxylan metabolic process",3]
["glutamate biosynthetic process",1]
["glutamate catabolic process",2]
["glutamate decarboxylation to succinate",2]
["glutamate dehydrogenase (NADP+) activity",1]
["glutamate dehydrogenase [NAD(P)+] activity",1]
["glutamate metabolic process",8]
["glutamate N-acetyltransferase activity",1]
["glutamate receptor activity",1]
["glutamate-1-semialdehyde 2-1-aminomutase activity",1]
["glutamate-prephenate aminotransferase activity",1]
["glutamate-tRNA ligase activity",1]
["glutamine family amino acid biosynthetic process",6]
["glutamine family amino acid catabolic process",4]
["glutamine family amino acid metabolic process",14]
["glutamine metabolic process",3]
["glutamine-tRNA ligase activity",1]
["glutaminyl-peptide cyclotransferase activity",1]
["glutaminyl-tRNA aminoacylation",1]
["glutamyl-tRNA aminoacylation",2]
["glutathione binding",1]
["glutathione catabolic process",1]
["glutathione dehydrogenase (ascorbate) activity",1]
["glutathione disulfide oxidoreductase activity",3]
["glutathione gamma-glutamylcysteinyltransferase activity",2]
["glutathione hydrolase activity",1]
["glutathione metabolic process",4]
["glutathione transferase activity",3]
["glutathione transmembrane transport",1]
["glutathione transport",2]
["glutathione-disulfide reductase (NADPH) activity",2]
["glyceraldehyde-3-phosphate biosynthetic process",1]
["glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity",2]
["glyceraldehyde-3-phosphate metabolic process",9]
["glycerate dehydrogenase activity",2]
["glycerate transmembrane transport",1]
["glycerate transmembrane transporter activity",1]
["glycerol biosynthetic process",1]
["glycerol catabolic process",2]
["glycerol kinase activity",1]
["glycerol metabolic process",4]
["glycerol-3-phosphatase activity",1]
["glycerol-3-phosphate dehydrogenase (quinone) activity",1]
["glycerol-3-phosphate metabolic process",2]
["glycerol-3-phosphate O-acyltransferase activity",1]
["glycerolipid biosynthetic process",19]
["glycerolipid catabolic process",5]
["glycerolipid metabolic process",29]
["glycerophosphate shuttle",1]
["glycerophosphodiester phosphodiesterase activity",1]
["glycerophospholipid biosynthetic process",14]
["glycerophospholipid catabolic process",1]
["glycerophospholipid metabolic process",20]
["glycine binding",1]
["glycine biosynthetic process",1]
["glycine biosynthetic process- by transamination of glyoxylate",1]
["glycine catabolic process",1]
["glycine hydroxymethyltransferase activity",2]
["glycine metabolic process",2]
["glycine-tRNA ligase activity",1]
["glycine:2-oxoglutarate aminotransferase activity",1]
["glycogen (starch) synthase activity",1]
["glycogen binding",1]
["glycogen biosynthetic process",4]
["glycogen catabolic process",3]
["glycogen debranching enzyme activity",4]
["glycogen metabolic process",13]
["glycogen phosphorylase activity",2]
["glycogenin glucosyltransferase activity",2]
["glycolate dehydrogenase activity",1]
["glycolate oxidase activity",1]
["glycolate transmembrane transport",1]
["glycolate transmembrane transporter activity",1]
["glycolate transport",1]
["glycolipid binding",2]
["glycolipid biosynthetic process",13]
["glycolipid catabolic process",1]
["glycolipid mannosyltransferase activity",2]
["glycolipid metabolic process",16]
["glycolipid transport",1]
["glycolytic process",10]
["glycolytic process through fructose-6-phosphate",3]
["glycolytic process through glucose-6-phosphate",1]
["glycophagy",1]
["glycoprotein 2-beta-D-xylosyltransferase activity",1]
["glycoprotein 3-alpha-L-fucosyltransferase activity",1]
["glycoprotein biosynthetic process",35]
["glycoprotein catabolic process",1]
["glycoprotein metabolic process",42]
["glycosaminoglycan catabolic process",1]
["glycosaminoglycan metabolic process",1]
["glycoside catabolic process",1]
["glycoside metabolic process",1]
["glycoside transport",1]
["glycosinolate biosynthetic process",3]
["glycosinolate catabolic process",3]
["glycosinolate metabolic process",7]
["glycosphingolipid binding",1]
["glycosphingolipid catabolic process",1]
["glycosphingolipid metabolic process",2]
["glycosyl compound biosynthetic process",12]
["glycosyl compound catabolic process",5]
["glycosyl compound metabolic process",27]
["glycosylation",39]
["glycosylceramide catabolic process",1]
["glycosylceramide metabolic process",1]
["glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex",2]
["glycosyltransferase activity",61]
["glycyl-tRNA aminoacylation",1]
["glycylpeptide N-tetradecanoyltransferase activity",1]
["glyoxalase III activity",1]
["glyoxylate cycle",3]
["glyoxylate metabolic process",4]
["glyoxylate reductase (NADP+) activity",4]
["glyoxysome",5]
["GMP biosynthetic process",1]
["GMP metabolic process",2]
["GMP synthase (glutamine-hydrolyzing) activity",1]
["GMP synthase activity",1]
["Golgi apparatus",166]
["Golgi apparatus subcompartment",78]
["Golgi calcium ion homeostasis",1]
["Golgi calcium ion transmembrane transport",1]
["Golgi calcium ion transport",1]
["Golgi cisterna",4]
["Golgi medial cisterna",3]
["Golgi membrane",25]
["Golgi organization",9]
["Golgi stack",7]
["Golgi to endosome transport",1]
["Golgi to lysosome transport",1]
["Golgi to plasma membrane protein transport",1]
["Golgi to plasma membrane transport",3]
["Golgi to vacuole transport",4]
["Golgi trans cisterna",2]
["Golgi transport complex",3]
["Golgi vesicle budding",2]
["Golgi vesicle docking",1]
["Golgi vesicle prefusion complex stabilization",1]
["Golgi vesicle transport",24]
["Golgi-associated vesicle",10]
["Golgi-associated vesicle membrane",8]
["gonad development",2]
["GPI anchor biosynthetic process",5]
["GPI anchor metabolic process",5]
["GPI-anchor transamidase activity",1]
["GPI-anchor transamidase complex",3]
["Gram-positive-bacterium-type cell wall",1]
["granulocyte activation",4]
["gravitropism",9]
["Group II intron splicing",3]
["growing cell tip",2]
["growth",75]
["growth cone",1]
["GTP binding",15]
["GTP biosynthetic process",2]
["GTP cyclohydrolase activity",1]
["GTP cyclohydrolase I activity",1]
["GTP diphosphokinase activity",3]
["GTP metabolic process",3]
["GTP-dependent protein binding",1]
["GTPase activator activity",10]
["GTPase activity",27]
["GTPase binding",26]
["GTPase complex",2]
["GTPase inhibitor activity",1]
["GTPase regulator activity",12]
["guanine deaminase activity",1]
["guanine metabolic process",1]
["guanine/thymine mispair binding",1]
["guanosine tetraphosphate biosynthetic process",1]
["guanosine tetraphosphate metabolic process",2]
["guanosine-3'-5'-bis(diphosphate) 3'-diphosphatase activity",1]
["guanosine-containing compound biosynthetic process",4]
["guanosine-containing compound metabolic process",6]
["guanosine-diphosphatase activity",1]
["guanyl nucleotide binding",15]
["guanyl ribonucleotide binding",15]
["guanyl-nucleotide exchange factor activity",11]
["guanylate kinase activity",1]
["guanylyltransferase activity",1]
["guard cell development",1]
["guard cell differentiation",2]
["guard cell fate commitment",1]
["guard cell morphogenesis",1]
["guard mother cell cytokinesis",1]
["gynoecium development",15]
["H3 histone acetyltransferase activity",1]
["H3K27me3 modified histone binding",1]
["H4 histone acetyltransferase activity",2]
["H4K20me3 modified histone binding",1]
["hair cycle",1]
["hair cycle process",1]
["hair follicle development",1]
["hair follicle placode formation",1]
["head development",6]
["heart development",4]
["heart formation",1]
["heart looping",1]
["heart morphogenesis",2]
["heat acclimation",2]
["heat shock protein binding",8]
["helicase activity",77]
["hematopoietic or lymphoid organ development",4]
["hematopoietic progenitor cell differentiation",1]
["heme binding",2]
["heme biosynthetic process",5]
["heme metabolic process",6]
["heme oxidation",1]
["heme oxygenase (decyclizing) activity",1]
["heme transport",1]
["hemicellulose metabolic process",8]
["hemopoiesis",2]
["hemostasis",3]
["heparan sulfate 6-O-sulfotransferase activity",1]
["heparan sulfate proteoglycan biosynthetic process",1]
["heparan sulfate proteoglycan biosynthetic process- enzymatic modification",1]
["heparan sulfate proteoglycan metabolic process",1]
["heparan sulfate sulfotransferase activity",1]
["hepaticobiliary system development",2]
["heterochromatin",10]
["heterochromatin assembly",3]
["heterochromatin assembly by small RNA",2]
["heterochromatin maintenance",1]
["heterochromatin organization",3]
["heterocycle biosynthetic process",156]
["heterocycle catabolic process",66]
["heterocycle metabolic process",509]
["heterocyclic compound binding",334]
["heteroduplex DNA loop binding",2]
["heteroduplex formation",2]
["heteropolysaccharide binding",1]
["heterotrimeric G-protein complex",2]
["hexokinase activity",1]
["hexosaminidase activity",1]
["hexose biosynthetic process",7]
["hexose catabolic process",4]
["hexose metabolic process",16]
["hexose transmembrane transport",6]
["hexose transmembrane transporter activity",6]
["hexosyltransferase activity",49]
["high-affinity arginine transmembrane transporter activity",1]
["high-affinity basic amino acid transmembrane transporter activity",1]
["high-affinity lysine transmembrane transporter activity",1]
["hippocampus development",2]
["histidine biosynthetic process",5]
["histidine metabolic process",5]
["histidine phosphotransfer kinase activity",1]
["histidinol-phosphatase activity",2]
["histoblast morphogenesis",1]
["histone acetylation",8]
["histone acetyltransferase activity",4]
["histone acetyltransferase activity (H4-K5 specific)",1]
["histone acetyltransferase complex",4]
["histone arginine methylation",6]
["histone binding",16]
["histone biotinylation",1]
["histone deacetylase activity",1]
["histone deacetylase activity (H4-K16 specific)",1]
["histone deacetylase binding",2]
["histone deacetylase complex",2]
["histone deacetylation",3]
["histone demethylase activity",1]
["histone demethylase activity (H3-K9 specific)",1]
["histone demethylation",2]
["histone exchange",2]
["histone H2A monoubiquitination",1]
["histone H2A ubiquitination",1]
["histone H3 acetylation",4]
["histone H3 deacetylation",2]
["histone H3-K27 methylation",4]
["histone H3-K27 trimethylation",1]
["histone H3-K36 methylation",2]
["histone H3-K4 methylation",7]
["histone H3-K4 trimethylation",2]
["histone H3-K9 acetylation",1]
["histone H3-K9 demethylation",2]
["histone H3-K9 methylation",1]
["histone H3-K9 modification",2]
["histone H3-R17 methylation",1]
["histone H3-R2 methylation",1]
["histone H3-R26 methylation",1]
["histone H3-S10 phosphorylation",1]
["histone H4 acetylation",5]
["histone H4 deacetylation",2]
["histone H4-K20 methylation",1]
["histone H4-K20 trimethylation",1]
["histone H4-K5 acetylation",1]
["histone H4-R3 methylation",2]
["histone kinase activity",1]
["histone kinase activity (H3-S10 specific)",1]
["histone lysine demethylation",2]
["histone lysine methylation",14]
["histone methylation",20]
["histone methyltransferase activity",11]
["histone methyltransferase activity (H3-K27 specific)",1]
["histone methyltransferase activity (H3-K36 specific)",1]
["histone methyltransferase activity (H3-K4 specific)",2]
["histone methyltransferase complex",5]
["histone modification",34]
["histone monoubiquitination",1]
["histone mRNA catabolic process",4]
["histone mRNA metabolic process",4]
["histone phosphorylation",1]
["histone pre-mRNA 3'end processing complex",1]
["histone serine kinase activity",1]
["histone ubiquitination",1]
["histone-arginine N-methyltransferase activity",5]
["histone-lysine N-methyltransferase activity",6]
["histone-serine phosphorylation",1]
["homeostasis of number of cells",1]
["homeostatic process",80]
["homocysteine metabolic process",2]
["homogalacturonan biosynthetic process",2]
["homogalacturonan metabolic process",2]
["homogentisate catabolic process",2]
["homogentisate metabolic process",2]
["homologous chromosome pairing at meiosis",5]
["homologous chromosome segregation",8]
["homologous recombination",15]
["homomethionine metabolic process",1]
["homoserine biosynthetic process",1]
["homoserine dehydrogenase activity",1]
["homoserine metabolic process",2]
["HOPS complex",5]
["hormone binding",7]
["hormone biosynthetic process",18]
["hormone catabolic process",3]
["hormone metabolic process",25]
["hormone receptor binding",3]
["hormone transport",14]
["hormone-mediated signaling pathway",42]
["host cell",1]
["host cell nuclear part",1]
["host cell nucleus",1]
["host cell part",1]
["host cellular component",1]
["host intracellular membrane-bounded organelle",1]
["host intracellular organelle",1]
["host intracellular part",1]
["host intracellular region",1]
["Hrd1p ubiquitin ligase complex",1]
["HslUV protease complex",1]
["Hsp70 protein binding",3]
["Hsp90 protein binding",2]
["hydro-lyase activity",15]
["hydrogen peroxide biosynthetic process",3]
["hydrogen peroxide catabolic process",6]
["hydrogen peroxide mediated signaling pathway",1]
["hydrogen peroxide metabolic process",9]
["hydrolase activity",380]
["hydrolase activity- acting on acid anhydrides",151]
["hydrolase activity- acting on acid anhydrides- in phosphorus-containing anhydrides",151]
["hydrolase activity- acting on acid carbon-carbon bonds",2]
["hydrolase activity- acting on acid carbon-carbon bonds- in ketonic substances",2]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds",21]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amides",4]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in cyclic amidines",5]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amides",7]
["hydrolase activity- acting on carbon-nitrogen (but not peptide) bonds- in linear amidines",6]
["hydrolase activity- acting on ester bonds",134]
["hydrolase activity- acting on ether bonds",1]
["hydrolase activity- acting on glycosyl bonds",39]
["hydrolase activity- hydrolyzing N-glycosyl compounds",5]
["hydrolase activity- hydrolyzing O-glycosyl compounds",34]
["hydroquinone:oxygen oxidoreductase activity",2]
["hydroxyacylglutathione hydrolase activity",1]
["hydroxycinnamoyltransferase activity",1]
["hydroxyethylthiazole kinase activity",1]
["hydroxymethyl-- formyl- and related transferase activity",3]
["hydroxymethylbilane synthase activity",1]
["hydroxymethylglutaryl-CoA lyase activity",1]
["hydroxymethylpyrimidine kinase activity",1]
["hydroxyproline O-arabinosyltransferase activity",1]
["hydroxyproline O-galactosyltransferase activity",4]
["hydroxypyruvate reductase activity",3]
["hyperosmotic response",13]
["hyperosmotic salinity response",6]
["hypotonic response",3]
["hypotonic salinity response",2]
["I band",1]
["icosanoid biosynthetic process",1]
["icosanoid metabolic process",3]
["icosanoid secretion",1]
["icosanoid transport",1]
["identical protein binding",83]
["IgE binding",2]
["imaginal disc development",4]
["imaginal disc morphogenesis",1]
["imaginal disc pattern formation",1]
["imidazole-containing compound metabolic process",5]
["imidazoleglycerol-phosphate dehydratase activity",1]
["immune effector process",12]
["immune response",43]
["immune response-activating cell surface receptor signaling pathway",2]
["immune response-activating signal transduction",3]
["immune response-regulating cell surface receptor signaling pathway",2]
["immune response-regulating signaling pathway",3]
["immune system development",5]
["immune system process",62]
["immunoglobulin binding",2]
["immunoglobulin production",1]
["IMP biosynthetic process",1]
["IMP dehydrogenase activity",1]
["IMP metabolic process",2]
["import across plasma membrane",1]
["import into cell",18]
["import into nucleus",14]
["in utero embryonic development",4]
["inactivation of MAPK activity",3]
["inclusion body assembly",1]
["indolalkylamine biosynthetic process",2]
["indolalkylamine catabolic process",2]
["indolalkylamine metabolic process",4]
["indole glucosinolate catabolic process",2]
["indole glucosinolate metabolic process",2]
["indole-3-glycerol-phosphate synthase activity",1]
["indole-containing compound biosynthetic process",2]
["indole-containing compound catabolic process",4]
["indole-containing compound metabolic process",7]
["indoleacetic acid biosynthetic process",1]
["indoleacetic acid metabolic process",1]
["indolebutyric acid metabolic process",1]
["induced systemic resistance",5]
["induced systemic resistance- ethylene mediated signaling pathway",3]
["induced systemic resistance- jasmonic acid mediated signaling pathway",2]
["induction by symbiont of host defense response",2]
["induction by symbiont of host immune response",2]
["induction by symbiont of host innate immune response",2]
["inductive cell-cell signaling",1]
["inflammatory response",1]
["inflorescence development",2]
["innate immune response",38]
["innate immune response-activating signal transduction",9]
["inner dynein arm assembly",3]
["inner ear development",2]
["inner ear morphogenesis",1]
["inner ear receptor cell development",1]
["inner ear receptor cell differentiation",1]
["inner ear receptor cell stereocilium organization",1]
["inner mitochondrial membrane organization",2]
["inner mitochondrial membrane protein complex",13]
["Ino80 complex",1]
["INO80-type complex",2]
["inorganic anion transmembrane transport",9]
["inorganic anion transmembrane transporter activity",14]
["inorganic anion transport",17]
["inorganic cation import across plasma membrane",1]
["inorganic cation transmembrane transport",87]
["inorganic cation transmembrane transporter activity",72]
["inorganic diphosphatase activity",1]
["inorganic ion homeostasis",34]
["inorganic ion import across plasma membrane",1]
["inorganic ion transmembrane transport",51]
["inorganic molecular entity transmembrane transporter activity",87]
["inorganic phosphate transmembrane transporter activity",4]
["inositol biosynthetic process",2]
["inositol bisphosphate phosphatase activity",1]
["inositol hexakisphosphate binding",2]
["inositol lipid-mediated signaling",1]
["inositol metabolic process",4]
["inositol monophosphate 1-phosphatase activity",2]
["inositol monophosphate phosphatase activity",3]
["inositol oxygenase activity",1]
["inositol phosphate biosynthetic process",4]
["inositol phosphate catabolic process",3]
["inositol phosphate dephosphorylation",3]
["inositol phosphate metabolic process",7]
["inositol phosphate phosphatase activity",6]
["inositol phosphate-mediated signaling",1]
["inositol tetrakisphosphate 1-kinase activity",1]
["inositol tetrakisphosphate 3-kinase activity",1]
["inositol tetrakisphosphate 6-kinase activity",1]
["inositol tetrakisphosphate kinase activity",2]
["inositol tetrakisphosphate phosphatase activity",1]
["inositol trisphosphate kinase activity",2]
["inositol trisphosphate phosphatase activity",1]
["inositol-1-3-4-5-tetrakisphosphate 3-phosphatase activity",1]
["inositol-1-3-4-trisphosphate 5-kinase activity",1]
["inositol-1-3-4-trisphosphate 6-kinase activity",2]
["inositol-1-4-5-trisphosphate 5-phosphatase activity",1]
["inositol-1-4-5-trisphosphate 6-kinase activity",1]
["inositol-3-phosphate synthase activity",1]
["instar larval or pupal development",2]
["instar larval or pupal morphogenesis",1]
["insulin receptor signaling pathway",1]
["integral component of chloroplast inner membrane",1]
["integral component of chloroplast outer membrane",5]
["integral component of cytoplasmic side of endoplasmic reticulum membrane",3]
["integral component of endoplasmic reticulum membrane",21]
["integral component of Golgi membrane",3]
["integral component of lumenal side of endoplasmic reticulum membrane",3]
["integral component of membrane",102]
["integral component of mitochondrial inner membrane",2]
["integral component of mitochondrial membrane",6]
["integral component of mitochondrial outer membrane",2]
["integral component of organelle membrane",19]
["integral component of peroxisomal membrane",4]
["integral component of plasma membrane",27]
["integral component of plastid inner membrane",1]
["integral component of plastid membrane",6]
["integral component of plastid outer membrane",5]
["intercalated disc",1]
["intercellular transport",2]
["intermediate filament cytoskeleton",1]
["intermembrane lipid transfer",2]
["intermembrane phospholipid transfer",1]
["internal peptidyl-lysine acetylation",8]
["internal protein amino acid acetylation",8]
["interstrand cross-link repair",5]
["intra-Golgi vesicle-mediated transport",4]
["intracellular anatomical structure",1807]
["intracellular cAMP-activated cation channel activity",1]
["intracellular cGMP-activated cation channel activity",1]
["intracellular cyclic nucleotide activated cation channel activity",2]
["intracellular immature spore",1]
["intracellular ligand-gated ion channel activity",2]
["intracellular lipid transport",1]
["intracellular membrane-bounded organelle",1491]
["intracellular mRNA localization",4]
["intracellular non-membrane-bounded organelle",290]
["intracellular organelle",1560]
["intracellular organelle lumen",305]
["intracellular pH reduction",4]
["intracellular protein transmembrane transport",19]
["intracellular protein transport",91]
["intracellular receptor signaling pathway",5]
["intracellular signal transduction",60]
["intracellular transport",123]
["intracellular vesicle",118]
["intraciliary transport",2]
["intraciliary transport involved in cilium assembly",1]
["intraciliary transport particle",2]
["intraciliary transport particle B",2]
["intralumenal vesicle formation",1]
["intramolecular lyase activity",1]
["intramolecular oxidoreductase activity",17]
["intramolecular oxidoreductase activity- interconverting aldoses and ketoses",2]
["intramolecular oxidoreductase activity- transposing C=C bonds",4]
["intramolecular oxidoreductase activity- transposing S-S bonds",9]
["intramolecular transferase activity",14]
["intramolecular transferase activity- phosphotransferases",3]
["intramolecular transferase activity- transferring amino groups",1]
["intramolecular transferase activity- transferring hydroxy groups",1]
["intrinsic component of chloroplast inner membrane",1]
["intrinsic component of chloroplast outer membrane",5]
["intrinsic component of endoplasmic reticulum membrane",22]
["intrinsic component of Golgi membrane",3]
["intrinsic component of membrane",113]
["intrinsic component of mitochondrial inner membrane",3]
["intrinsic component of mitochondrial membrane",7]
["intrinsic component of mitochondrial outer membrane",2]
["intrinsic component of organelle membrane",21]
["intrinsic component of peroxisomal membrane",4]
["intrinsic component of plasma membrane",34]
["intrinsic component of plastid inner membrane",1]
["intrinsic component of plastid membrane",6]
["intrinsic component of plastid outer membrane",5]
["intrinsic component of synaptic vesicle membrane",1]
["inward rectifier potassium channel activity",2]
["ion antiporter activity involved in regulation of postsynaptic membrane potential",1]
["ion binding",179]
["ion channel activity",15]
["ion channel binding",1]
["ion gated channel activity",11]
["ion homeostasis",39]
["ion transmembrane transport",110]
["ion transmembrane transporter activity",100]
["ion transport",124]
["IRES-dependent viral translational initiation",1]
["iron chaperone activity",1]
["iron coordination entity transport",1]
["iron import into the mitochondrion",1]
["iron incorporation into metallo-sulfur cluster",1]
["iron ion binding",7]
["iron ion homeostasis",9]
["iron ion transmembrane transport",3]
["iron ion transmembrane transporter activity",3]
["iron ion transport",4]
["iron-sulfur cluster assembly",6]
["iron-sulfur cluster binding",5]
["isoamylase activity",3]
["isoamylase complex",2]
["isocitrate dehydrogenase (NAD+) activity",1]
["isocitrate dehydrogenase activity",1]
["isocitrate lyase activity",1]
["isocitrate metabolic process",1]
["isoleucine biosynthetic process",2]
["isoleucine metabolic process",2]
["isomerase activity",62]
["isopentenyl diphosphate biosynthetic process",6]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",4]
["isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process",1]
["isopentenyl diphosphate biosynthetic process- mevalonate pathway",1]
["isopentenyl diphosphate metabolic process",6]
["isoprenoid binding",3]
["isoprenoid biosynthetic process",28]
["isoprenoid catabolic process",2]
["isoprenoid metabolic process",35]
["isoprenoid transport",1]
["isovaleryl-CoA dehydrogenase activity",1]
["isovaleryl-CoA(4-) catabolic process",1]
["isovaleryl-CoA(4-) metabolic process",1]
["ISWI-type complex",1]
["jasmonic acid and ethylene-dependent systemic resistance",4]
["jasmonic acid and ethylene-dependent systemic resistance- ethylene mediated signaling pathway",1]
["jasmonic acid and ethylene-dependent systemic resistance- jasmonic acid mediated signaling pathway",2]
["jasmonic acid biosynthetic process",4]
["jasmonic acid mediated signaling pathway",10]
["jasmonic acid metabolic process",4]
["K48-linked polyubiquitin modification-dependent protein binding",1]
["K63-linked polyubiquitin modification-dependent protein binding",1]
["karyogamy",3]
["ketone biosynthetic process",4]
["ketone catabolic process",3]
["kidney development",1]
["kinase activator activity",2]
["kinase activity",121]
["kinase binding",12]
["kinase regulator activity",7]
["kinesin binding",3]
["kinesin complex",10]
["kinetochore",17]
["kinetochore assembly",3]
["kinetochore binding",4]
["kinetochore microtubule",4]
["kinetochore organization",3]
["kinocilium",1]
["Krueppel-associated box domain binding",1]
["kynurenine aminotransferase activity",1]
["kynurenine metabolic process",1]
["kynurenine-oxoglutarate transaminase activity",1]
["L-alanine catabolic process",1]
["L-alanine catabolic process- by transamination",1]
["L-alanine metabolic process",1]
["L-alanine:2-oxoglutarate aminotransferase activity",2]
["L-alpha-amino acid transmembrane transport",6]
["L-amino acid transmembrane transporter activity",6]
["L-amino acid transport",6]
["L-arginine transmembrane transport",1]
["L-arginine transport",1]
["L-ascorbate peroxidase activity",1]
["L-ascorbic acid biosynthetic process",2]
["L-ascorbic acid metabolic process",2]
["L-ascorbic acid transmembrane transport",1]
["L-ascorbic acid transmembrane transporter activity",1]
["L-aspartate:2-oxoglutarate aminotransferase activity",3]
["L-cysteine desulfhydrase activity",1]
["L-cystine transmembrane transporter activity",1]
["L-cystine transport",1]
["L-fucose catabolic process",1]
["L-fucose metabolic process",1]
["L-galactose dehydrogenase activity",1]
["L-galactose-1-phosphate phosphatase activity",1]
["L-glutamate transmembrane transport",1]
["L-glutamate transmembrane transporter activity",1]
["L-glutamine aminotransferase activity",1]
["L-glutamine:pyruvate aminotransferase activity",1]
["L-gulono-1-4-lactone dehydrogenase activity",1]
["L-histidine transmembrane transport",1]
["L-histidine transmembrane transporter activity",1]
["L-kynurenine metabolic process",1]
["L-L-diaminopimelate aminotransferase activity",1]
["L-lysine transmembrane transport",1]
["L-lysine transmembrane transporter activity",1]
["L-lysine transport",1]
["L-malate dehydrogenase activity",3]
["L-methionine biosynthetic process",2]
["L-methionine biosynthetic process from L-homoserine via cystathionine",1]
["L-methionine salvage",1]
["L-methionine salvage from methylthioadenosine",1]
["L-ornithine transmembrane transport",1]
["L-ornithine transmembrane transporter activity",1]
["L-phenylalanine aminotransferase activity",1]
["L-phenylalanine biosynthetic process",2]
["L-phenylalanine catabolic process",1]
["L-phenylalanine metabolic process",4]
["L-phenylalanine:pyruvate aminotransferase activity",1]
["L-serine ammonia-lyase activity",1]
["L-serine biosynthetic process",2]
["L-serine metabolic process",2]
["L-serine transmembrane transporter activity",1]
["L-serine transport",1]
["L-threonine ammonia-lyase activity",1]
["L-tryptophan aminotransferase activity",1]
["L-tryptophan:2-oxoglutarate aminotransferase activity",1]
["L-tryptophan:pyruvate aminotransferase activity",1]
["lactate biosynthetic process",1]
["lactate dehydrogenase activity",2]
["lactate metabolic process",3]
["lactate oxidation",1]
["lactone biosynthetic process",3]
["lactone metabolic process",3]
["lactoylglutathione lyase activity",1]
["lagging strand elongation",2]
["lamellar body",1]
["large ribosomal subunit",8]
["larval central nervous system remodeling",1]
["larval development",3]
["late endosome",20]
["late endosome membrane",9]
["late endosome to lysosome transport",1]
["late endosome to vacuole transport",9]
["late endosome to vacuole transport via multivesicular body sorting pathway",3]
["late nucleophagy",2]
["lateral attachment of mitotic spindle microtubules to kinetochore",3]
["lateral root branching",1]
["lateral root development",22]
["lateral root formation",11]
["lateral root morphogenesis",12]
["leading edge membrane",2]
["leaf development",53]
["leaf formation",1]
["leaf morphogenesis",12]
["leaf senescence",22]
["leaf shaping",1]
["leaf vascular tissue pattern formation",7]
["leak channel activity",1]
["learning",3]
["learning or memory",3]
["left/right pattern formation",1]
["leucine biosynthetic process",2]
["leucine catabolic process",3]
["leucine metabolic process",5]
["leucine-tRNA ligase activity",2]
["leucoplast",1]
["leucyl-tRNA aminoacylation",2]
["leukocyte activation",4]
["leukocyte activation involved in immune response",4]
["leukocyte chemotaxis",1]
["leukocyte degranulation",3]
["leukocyte mediated immunity",3]
["leukocyte migration",1]
["Lewis a epitope biosynthetic process",1]
["ligand-gated cation channel activity",3]
["ligand-gated channel activity",4]
["ligand-gated ion channel activity",4]
["ligase activity",40]
["ligase activity- forming carbon-carbon bonds",2]
["ligase activity- forming carbon-nitrogen bonds",9]
["ligase activity- forming carbon-oxygen bonds",16]
["ligase activity- forming carbon-sulfur bonds",10]
["ligase activity- forming nitrogen-metal bonds",2]
["ligase activity- forming nitrogen-metal bonds- forming coordination complexes",2]
["ligase activity- forming phosphoric ester bonds",1]
["light-harvesting complex",1]
["lignin biosynthetic process",4]
["lignin catabolic process",1]
["lignin metabolic process",7]
["limb development",3]
["limb morphogenesis",2]
["limbic system development",2]
["limit dextrinase activity",1]
["linoleate 13S-lipoxygenase activity",1]
["linoleic acid metabolic process",1]
["lipase activator activity",1]
["lipase activity",15]
["lipid binding",25]
["lipid biosynthetic process",96]
["lipid catabolic process",28]
["lipid droplet",6]
["lipid droplet organization",1]
["lipid homeostasis",9]
["lipid kinase activity",1]
["lipid localization",20]
["lipid metabolic process",151]
["lipid modification",21]
["lipid oxidation",17]
["lipid phosphorylation",3]
["lipid storage",3]
["lipid transfer activity",1]
["lipid translocation",2]
["lipid transport",17]
["lipid transporter activity",10]
["lipid X metabolic process",1]
["lipoate biosynthetic process",2]
["lipoate metabolic process",2]
["lipoate synthase activity",2]
["lipophagy",1]
["lipopolysaccharide binding",1]
["lipoprotein biosynthetic process",10]
["lipoprotein catabolic process",1]
["lipoprotein metabolic process",11]
["liposaccharide metabolic process",16]
["lipoyl(octanoyl) transferase activity",1]
["liver development",2]
["localization",377]
["localization of cell",10]
["localization within membrane",2]
["locomotion",20]
["locomotory behavior",3]
["locomotory exploration behavior",1]
["long-chain fatty acid biosynthetic process",1]
["long-chain fatty acid import into cell",1]
["long-chain fatty acid metabolic process",8]
["long-chain fatty acid transport",2]
["long-chain fatty acid-CoA ligase activity",3]
["long-chain fatty-acyl-CoA metabolic process",1]
["long-chain-enoyl-CoA hydratase activity",1]
["long-day photoperiodism",4]
["long-day photoperiodism- flowering",2]
["long-distance posttranscriptional gene silencing",1]
["long-term synaptic potentiation",1]
["longitudinal axis specification",3]
["low-affinity phosphate transmembrane transporter activity",1]
["Lsm1-7-Pat1 complex",1]
["lumenal side of endoplasmic reticulum membrane",3]
["lung development",3]
["lung vasculature development",1]
["lyase activity",40]
["lycopene beta cyclase activity",1]
["lycopene biosynthetic process",1]
["lycopene epsilon cyclase activity",1]
["lycopene metabolic process",1]
["lysine biosynthetic process",1]
["lysine biosynthetic process via aminoadipic acid",1]
["lysine metabolic process",1]
["lysine N-methyltransferase activity",8]
["lysine-acetylated histone binding",2]
["lysine-tRNA ligase activity",1]
["lysophosphatidic acid acyltransferase activity",1]
["lysophosphatidic acid phosphatase activity",1]
["lysophosphatidylethanolamine acyltransferase activity",1]
["lysophospholipase activity",1]
["lysophospholipid acyltransferase activity",3]
["lysosomal lumen",1]
["lysosomal membrane",12]
["lysosomal microautophagy",2]
["lysosomal transport",12]
["lysosome",21]
["lysosome organization",6]
["lytic vacuole",25]
["lytic vacuole membrane",13]
["lytic vacuole organization",7]
["lytic vacuole within protein storage vacuole",1]
["m7G(5')pppN diphosphatase activity",1]
["macroautophagy",17]
["macrolide binding",6]
["macromolecule biosynthetic process",214]
["macromolecule catabolic process",132]
["macromolecule deacylation",4]
["macromolecule depalmitoylation",1]
["macromolecule glycosylation",34]
["macromolecule localization",145]
["macromolecule metabolic process",798]
["macromolecule methylation",46]
["macromolecule modification",364]
["macromolecule transmembrane transporter activity",6]
["macropinosome",1]
["magnesium chelatase activity",2]
["magnesium chelatase complex",3]
["magnesium ion binding",15]
["magnesium ion homeostasis",1]
["magnesium ion transmembrane transport",4]
["magnesium ion transmembrane transporter activity",4]
["magnesium ion transport",5]
["magnesium protoporphyrin IX methyltransferase activity",1]
["magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity",1]
["maintenance of cell number",13]
["maintenance of DNA methylation",2]
["maintenance of DNA repeat elements",2]
["maintenance of dormancy",2]
["maintenance of floral organ identity",1]
["maintenance of inflorescence meristem identity",1]
["maintenance of location",6]
["maintenance of location in cell",3]
["maintenance of meristem identity",9]
["maintenance of mitotic sister chromatid cohesion",1]
["maintenance of plant organ identity",1]
["maintenance of protein localization in endoplasmic reticulum",1]
["maintenance of protein localization in organelle",3]
["maintenance of protein location",3]
["maintenance of protein location in cell",3]
["maintenance of protein location in nucleus",2]
["maintenance of rDNA",1]
["maintenance of root meristem identity",5]
["maintenance of seed dormancy",2]
["maintenance of shoot apical meristem identity",5]
["maintenance of sister chromatid cohesion",1]
["malate dehydrogenase (decarboxylating) (NAD+) activity",1]
["malate dehydrogenase activity",4]
["malate metabolic process",3]
["malate synthase activity",1]
["malate transmembrane transport",3]
["malate transmembrane transporter activity",3]
["malate transport",3]
["male gamete generation",18]
["male meiosis chromosome segregation",1]
["male meiosis cytokinesis",5]
["male meiotic nuclear division",11]
["male-female gamete recognition during double fertilization forming a zygote and endosperm",1]
["maleylacetoacetate isomerase activity",1]
["malic enzyme activity",1]
["maltoheptaose binding",1]
["maltose catabolic process",1]
["maltose metabolic process",2]
["maltose transmembrane transporter activity",1]
["maltose transport",1]
["mandelonitrile lyase activity",1]
["manganese ion binding",7]
["manganese ion transmembrane transport",5]
["manganese ion transmembrane transporter activity",5]
["manganese ion transport",5]
["mannan catabolic process",1]
["mannan endo-1-4-beta-mannosidase activity",1]
["mannan metabolic process",2]
["mannan synthase activity",2]
["mannose metabolic process",1]
["mannosidase activity",6]
["mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity",1]
["mannosyl-oligosaccharide 1-2-alpha-mannosidase activity",4]
["mannosyl-oligosaccharide 1-3-1-6-alpha-mannosidase activity",1]
["mannosyl-oligosaccharide mannosidase activity",5]
["mannosylation",6]
["mannosyltransferase activity",6]
["MAP kinase activity",4]
["MAP kinase kinase activity",2]
["MAP kinase kinase kinase activity",2]
["MAP kinase phosphatase activity",3]
["MAP kinase serine/threonine phosphatase activity",2]
["MAP kinase tyrosine phosphatase activity",1]
["MAPK cascade",7]
["mating",1]
["mating behavior",1]
["mating projection",3]
["mating projection tip",3]
["maturation of 5.8S rRNA",13]
["maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",9]
["maturation of LSU-rRNA",12]
["maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",7]
["maturation of SSU-rRNA",13]
["maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA- LSU-rRNA- 4.5S-rRNA- 5S-rRNA)",1]
["maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA- 5.8S rRNA- LSU-rRNA)",9]
["mature ribosome assembly",1]
["MCM complex",3]
["Mcs4 RR-MAPKKK complex",1]
["mechanoreceptor differentiation",1]
["mechanosensitive ion channel activity",4]
["mediator complex",12]
["medium-chain fatty acid metabolic process",1]
["medium-chain fatty acid-CoA ligase activity",1]
["megagametogenesis",6]
["megasporogenesis",1]
["meiosis I",21]
["meiosis I cell cycle process",23]
["meiosis II",2]
["meiosis II cell cycle process",2]
["meiotic cell cycle",38]
["meiotic cell cycle checkpoint signaling",2]
["meiotic cell cycle process",36]
["meiotic chromosome segregation",13]
["meiotic chromosome separation",5]
["meiotic cytokinesis",5]
["meiotic DNA double-strand break formation",1]
["meiotic DNA double-strand break processing",1]
["meiotic DNA recombinase assembly",1]
["meiotic gene conversion",4]
["meiotic mismatch repair",1]
["meiotic nuclear division",30]
["meiotic recombination checkpoint signaling",1]
["meiotic sister chromatid cohesion",1]
["meiotic sister chromatid cohesion- centromeric",1]
["meiotic sister chromatid segregation",1]
["meiotic spindle assembly checkpoint signaling",1]
["meiotic spindle checkpoint signaling",1]
["meiotic spindle organization",1]
["meiotic spindle pole body",1]
["melibiose catabolic process",1]
["melibiose metabolic process",1]
["membrane",844]
["membrane coat",8]
["membrane depolarization",1]
["membrane depolarization during action potential",1]
["membrane docking",7]
["membrane fission",2]
["membrane fusion",15]
["membrane invagination",1]
["membrane lipid biosynthetic process",23]
["membrane lipid catabolic process",4]
["membrane lipid metabolic process",30]
["membrane organization",46]
["membrane protein complex",77]
["membrane protein intracellular domain proteolysis",1]
["membrane protein proteolysis",2]
["membrane protein proteolysis involved in retrograde protein transport- ER to cytosol",1]
["membrane-bounded organelle",1520]
["membrane-enclosed lumen",305]
["memory",3]
["meristem determinacy",1]
["meristem development",43]
["meristem growth",2]
["meristem initiation",8]
["meristem maintenance",28]
["meristem structural organization",10]
["mesoderm development",2]
["mesoderm formation",1]
["mesoderm morphogenesis",1]
["messenger ribonucleoprotein complex assembly",1]
["metabolic process",1292]
["metal cluster binding",5]
["metal incorporation into metallo-molybdopterin complex",1]
["metal incorporation into metallo-sulfur cluster",1]
["metal ion binding",91]
["metal ion homeostasis",24]
["metal ion transmembrane transporter activity",31]
["metal ion transport",53]
["metal ion:proton antiporter activity",1]
["metallo-sulfur cluster assembly",6]
["metalloaminopeptidase activity",2]
["metallochaperone activity",1]
["metalloendopeptidase activity",6]
["metalloexopeptidase activity",2]
["metallopeptidase activity",15]
["metamorphosis",1]
["metaphase plate congression",10]
["metaxylem development",2]
["methenyltetrahydrofolate cyclohydrolase activity",1]
["methionine biosynthetic process",4]
["methionine metabolic process",5]
["methionine synthase activity",1]
["methionine-oxo-acid transaminase activity",1]
["methionine-tRNA ligase activity",1]
["methionyl-tRNA aminoacylation",1]
["methotrexate transmembrane transporter activity",1]
["methotrexate transport",1]
["methyl-CpG binding",1]
["methylated histone binding",4]
["methylation",66]
["methylation-dependent protein binding",4]
["methylcrotonoyl-CoA carboxylase activity",1]
["methylcytosine dioxygenase activity",1]
["methylenetetrahydrofolate dehydrogenase (NADP+) activity",1]
["methylenetetrahydrofolate reductase (NAD(P)H) activity",1]
["methylglyoxal catabolic process",3]
["methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione",1]
["methylglyoxal catabolic process to lactate",2]
["methylglyoxal metabolic process",3]
["methylthioadenosine nucleosidase activity",1]
["methylthiotransferase activity",1]
["methyltransferase activity",49]
["methyltransferase complex",11]
["MHC class I protein binding",1]
["MHC class II protein binding",1]
["MHC protein binding",2]
["microbody",47]
["microbody membrane",10]
["microgametogenesis",6]
["microsporogenesis",2]
["microtubule",17]
["microtubule associated complex",11]
["microtubule binding",17]
["microtubule bundle formation",9]
["microtubule cytoskeleton",40]
["microtubule cytoskeleton organization",41]
["microtubule cytoskeleton organization involved in mitosis",14]
["microtubule depolymerization",2]
["microtubule end",1]
["microtubule minus-end binding",1]
["microtubule motor activity",10]
["microtubule nucleation",2]
["microtubule nucleation by interphase microtubule organizing center",1]
["microtubule nucleation by microtubule organizing center",1]
["microtubule organizing center",11]
["microtubule organizing center organization",5]
["microtubule plus-end",1]
["microtubule plus-end binding",1]
["microtubule plus-end directed mitotic chromosome migration",3]
["microtubule polymerization",2]
["microtubule polymerization or depolymerization",4]
["microtubule severing",2]
["microtubule-based movement",20]
["microtubule-based process",47]
["microtubule-based transport",5]
["microtubule-severing ATPase activity",2]
["midbody",5]
["minus-end kinesin complex",1]
["miRNA catabolic process",3]
["miRNA export from nucleus",1]
["miRNA loading onto RISC involved in gene silencing by miRNA",2]
["miRNA metabolic process",3]
["miRNA transport",2]
["mismatch repair",7]
["mismatch repair complex",3]
["mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication",1]
["mismatched DNA binding",3]
["mitochondria-nucleus signaling pathway",2]
["mitochondrial ADP transmembrane transport",1]
["mitochondrial alpha-ketoglutarate dehydrogenase complex",2]
["mitochondrial ATP synthesis coupled electron transport",3]
["mitochondrial ATP transmembrane transport",1]
["mitochondrial cytochrome c oxidase assembly",1]
["mitochondrial degradosome",1]
["mitochondrial DNA metabolic process",1]
["mitochondrial DNA replication",1]
["mitochondrial DNA-directed RNA polymerase complex",2]
["mitochondrial electron transfer flavoprotein complex",1]
["mitochondrial electron transport- NADH to ubiquinone",2]
["mitochondrial electron transport- succinate to ubiquinone",1]
["mitochondrial envelope",50]
["mitochondrial fission",5]
["mitochondrial gene expression",10]
["mitochondrial genome maintenance",1]
["mitochondrial glycyl-tRNA aminoacylation",1]
["mitochondrial inner membrane",39]
["mitochondrial intermembrane space",1]
["mitochondrial L-ornithine transmembrane transport",1]
["mitochondrial large ribosomal subunit",1]
["mitochondrial matrix",28]
["mitochondrial membrane",48]
["mitochondrial membrane organization",5]
["mitochondrial mRNA catabolic process",1]
["mitochondrial mRNA modification",1]
["mitochondrial mRNA processing",1]
["mitochondrial mRNA surveillance",1]
["mitochondrial ncRNA surveillance",1]
["mitochondrial nucleoid",2]
["mitochondrial outer membrane",8]
["mitochondrial outer membrane permeabilization",1]
["mitochondrial outer membrane permeabilization involved in programmed cell death",1]
["mitochondrial outer membrane translocase complex",1]
["mitochondrial protein catabolic process",1]
["mitochondrial protein-containing complex",22]
["mitochondrial proton-transporting ATP synthase complex",1]
["mitochondrial proton-transporting ATP synthase complex assembly",1]
["mitochondrial respirasome",8]
["mitochondrial respiratory chain complex assembly",1]
["mitochondrial respiratory chain complex I",6]
["mitochondrial respiratory chain complex II- succinate dehydrogenase complex (ubiquinone)",1]
["mitochondrial respiratory chain complex III",1]
["mitochondrial ribosome",2]
["mitochondrial RNA 3'-end processing",1]
["mitochondrial RNA catabolic process",2]
["mitochondrial RNA metabolic process",8]
["mitochondrial RNA modification",3]
["mitochondrial RNA processing",4]
["mitochondrial RNA surveillance",1]
["mitochondrial small ribosomal subunit",1]
["mitochondrial transcription",2]
["mitochondrial translation",4]
["mitochondrial translational elongation",2]
["mitochondrial translational termination",1]
["mitochondrial transmembrane transport",9]
["mitochondrial transport",23]
["mitochondrial tricarboxylic acid cycle enzyme complex",2]
["mitochondrial tRNA modification",1]
["mitochondrial tRNA processing",1]
["mitochondrial tRNA pseudouridine synthesis",1]
["mitochondrion",214]
["mitochondrion disassembly",7]
["mitochondrion localization",3]
["mitochondrion morphogenesis",1]
["mitochondrion organization",35]
["mitochondrion targeting sequence binding",1]
["mitochondrion transport along microtubule",3]
["mitophagy",1]
["mitotic cell cycle",50]
["mitotic cell cycle checkpoint signaling",12]
["mitotic cell cycle phase transition",9]
["mitotic cell cycle process",47]
["mitotic centrosome separation",1]
["mitotic chromosome condensation",2]
["mitotic chromosome movement towards spindle pole",4]
["mitotic cytokinesis",16]
["mitotic cytokinetic process",10]
["mitotic DNA damage checkpoint signaling",5]
["mitotic DNA integrity checkpoint signaling",6]
["mitotic DNA replication",2]
["mitotic DNA replication checkpoint signaling",1]
["mitotic DNA replication initiation",1]
["mitotic DNA replication preinitiation complex assembly",1]
["mitotic G1 DNA damage checkpoint signaling",6]
["mitotic G1/S transition checkpoint signaling",2]
["mitotic G2 DNA damage checkpoint signaling",2]
["mitotic G2/M transition checkpoint",2]
["mitotic intra-S DNA damage checkpoint signaling",2]
["mitotic metaphase plate congression",9]
["mitotic nuclear division",20]
["mitotic recombination",7]
["mitotic sister chromatid cohesion",1]
["mitotic sister chromatid segregation",14]
["mitotic sister chromatid separation",1]
["mitotic spindle",6]
["mitotic spindle assembly",3]
["mitotic spindle assembly checkpoint signaling",5]
["mitotic spindle checkpoint signaling",5]
["mitotic spindle disassembly",2]
["mitotic spindle midzone",3]
["mitotic spindle organization",14]
["mitotic spindle pole",1]
["mitotic spindle pole body",1]
["MLL1 complex",2]
["MLL1/2 complex",2]
["MLL3/4 complex",3]
["Mo-molybdopterin cofactor biosynthetic process",1]
["Mo-molybdopterin cofactor metabolic process",1]
["Mo-molybdopterin cofactor sulfurase activity",1]
["modification by symbiont of host cellular component",1]
["modification by symbiont of host structure",1]
["modification of cellular component in other organism involved in symbiotic interaction",1]
["modification of structure of other organism involved in symbiotic interaction",1]
["modification-dependent macromolecule catabolic process",56]
["modification-dependent protein binding",10]
["modification-dependent protein catabolic process",49]
["modified amino acid binding",1]
["modified amino acid transmembrane transporter activity",2]
["modified amino acid transport",4]
["modulation by host of symbiont process",2]
["modulation by host of viral genome replication",1]
["modulation by host of viral process",2]
["modulation by symbiont of host cellular process",1]
["modulation by symbiont of host defense response",6]
["modulation by symbiont of host immune response",6]
["modulation by symbiont of host innate immune response",6]
["modulation by symbiont of host process",6]
["modulation by virus of host process",1]
["modulation of chemical synaptic transmission",4]
["modulation of process of other organism",9]
["modulation of process of other organism involved in symbiotic interaction",8]
["molecular adaptor activity",8]
["molecular carrier activity",6]
["molecular function regulator",52]
["molecular transducer activity",30]
["molecular_function",1583]
["molting cycle",1]
["molting cycle process",1]
["molybdate ion export from vacuole",1]
["molybdate ion transmembrane transporter activity",1]
["molybdate ion transport",1]
["molybdenum incorporation into molybdenum-molybdopterin complex",1]
["molybdenum ion binding",1]
["molybdopterin adenylyltransferase activity",1]
["molybdopterin cofactor biosynthetic process",1]
["molybdopterin cofactor metabolic process",2]
["molybdopterin molybdotransferase activity",1]
["monoacylglycerol catabolic process",1]
["monoacylglycerol metabolic process",1]
["monocarboxylic acid binding",5]
["monocarboxylic acid biosynthetic process",37]
["monocarboxylic acid catabolic process",19]
["monocarboxylic acid metabolic process",81]
["monocarboxylic acid transmembrane transporter activity",6]
["monocarboxylic acid transport",8]
["monodehydroascorbate reductase (NADH) activity",2]
["monolayer-surrounded lipid storage body",1]
["monooxygenase activity",20]
["monopolar cell growth",1]
["monopolar spindle attachment to meiosis I kinetochore",2]
["monosaccharide binding",2]
["monosaccharide biosynthetic process",10]
["monosaccharide catabolic process",6]
["monosaccharide metabolic process",24]
["monosaccharide transmembrane transport",7]
["monosaccharide transmembrane transporter activity",7]
["monovalent cation:proton antiporter activity",3]
["monovalent inorganic anion homeostasis",2]
["monovalent inorganic cation homeostasis",11]
["morphogenesis of a branching structure",7]
["morphogenesis of a polarized epithelium",1]
["morphogenesis of an epithelium",5]
["morphogenesis of embryonic epithelium",1]
["motile cilium",3]
["motile cilium assembly",1]
["motor activity",10]
["movement in host",1]
["movement in host environment",2]
["movement of cell or subcellular component",30]
["Mre11 complex",1]
["mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity",4]
["mRNA (adenine-N1-)-methyltransferase activity",1]
["mRNA 3'-end processing",14]
["mRNA 3'-splice site recognition",1]
["mRNA 3'-UTR AU-rich region binding",6]
["mRNA 3'-UTR binding",2]
["mRNA 5'-splice site recognition",1]
["mRNA alternative polyadenylation",1]
["mRNA binding",42]
["mRNA cap binding complex",3]
["mRNA catabolic process",26]
["mRNA cis splicing- via spliceosome",2]
["mRNA cleavage",8]
["mRNA cleavage and polyadenylation specificity factor complex",4]
["mRNA cleavage factor complex",8]
["mRNA cleavage involved in mRNA processing",2]
["mRNA destabilization",1]
["mRNA editing complex",2]
["mRNA export from nucleus",13]
["mRNA guanylyltransferase activity",1]
["mRNA metabolic process",86]
["mRNA methylation",6]
["mRNA methyltransferase activity",5]
["mRNA modification",11]
["mRNA polyadenylation",11]
["mRNA processing",51]
["mRNA pseudouridine synthesis",3]
["mRNA splice site selection",2]
["mRNA splicing- via spliceosome",33]
["mRNA stabilization",2]
["mRNA transcription",1]
["mRNA transport",13]
["mRNA-containing ribonucleoprotein complex export from nucleus",13]
["mucilage biosynthetic process",7]
["mucilage biosynthetic process involved in seed coat development",6]
["mucilage extrusion from seed coat",1]
["mucilage metabolic process",7]
["mucilage metabolic process involved in seed coat development",6]
["multi-eIF complex",1]
["multi-multicellular organism process",34]
["multi-organism carbohydrate catabolic process",1]
["multi-organism carbohydrate metabolic process",1]
["multi-organism catabolic process",1]
["multi-organism cellular localization",1]
["multi-organism cellular process",7]
["multi-organism intercellular transport",1]
["multi-organism localization",2]
["multi-organism metabolic process",1]
["multi-organism process",203]
["multi-organism reproductive process",36]
["multi-organism transport",2]
["multicellular organism development",395]
["multicellular organism reproduction",35]
["multicellular organismal homeostasis",3]
["multicellular organismal movement",1]
["multicellular organismal process",433]
["multicellular organismal reproductive process",33]
["multicellular organismal signaling",1]
["multicellular organismal water homeostasis",1]
["multidimensional cell growth",9]
["multimeric ribonuclease P complex",1]
["multivesicular body",4]
["multivesicular body membrane",1]
["multivesicular body sorting pathway",6]
["muscle cell development",1]
["muscle cell differentiation",2]
["muscle structure development",3]
["muscle tissue development",2]
["MutLalpha complex",1]
["MutSalpha complex",1]
["MutSbeta complex",1]
["mycotoxin biosynthetic process",1]
["mycotoxin metabolic process",1]
["myelin assembly",1]
["myelin sheath",1]
["myelination",2]
["myeloid cell activation involved in immune response",4]
["myeloid leukocyte activation",4]
["myeloid leukocyte mediated immunity",3]
["myo-inositol hexakisphosphate biosynthetic process",4]
["myo-inositol hexakisphosphate metabolic process",4]
["myo-inositol transmembrane transporter activity",1]
["myo-inositol transport",1]
["myo-inositol:proton symporter activity",1]
["myoblast differentiation",1]
["myofibril",1]
["myosin binding",2]
["myosin heavy chain binding",1]
["myosin tail binding",1]
["myosin XI tail binding",1]
["myristoyltransferase activity",1]
["N-(long-chain-acyl)ethanolamine deacylase activity",1]
["N-acetyltransferase activity",7]
["N-acylethanolamine metabolic process",1]
["N-acylsphingosine amidohydrolase activity",1]
["N-acyltransferase activity",9]
["N-carbamoylputrescine amidase activity",1]
["N-glycan processing",8]
["N-methyltransferase activity",19]
["N-terminal peptidyl-glycine N-myristoylation",1]
["N-terminal protein amino acid modification",3]
["N-terminal protein lipidation",1]
["N-terminal protein myristoylation",1]
["N6-methyladenosine-containing RNA binding",1]
["N6-threonylcarbomyladenosine methylthiotransferase activity",1]
["NAD binding",6]
["NAD biosynthesis via nicotinamide riboside salvage pathway",1]
["NAD biosynthetic process",5]
["NAD metabolic process",9]
["NAD transmembrane transport",1]
["NAD transmembrane transporter activity",1]
["NAD transport",1]
["NAD(P)+ transhydrogenase activity",2]
["NAD(P)H dehydrogenase (quinone) activity",1]
["NAD(P)H dehydrogenase complex (plastoquinone)",2]
["NAD+ binding",1]
["NADH dehydrogenase (quinone) activity",1]
["NADH dehydrogenase (ubiquinone) activity",1]
["NADH dehydrogenase activity",4]
["NADH dehydrogenase complex",6]
["NADH dehydrogenase complex (plastoquinone) assembly",1]
["NADH dehydrogenase complex assembly",1]
["NADH metabolic process",6]
["NADH oxidation",1]
["NADH regeneration",1]
["NADHX epimerase activity",2]
["NADP binding",5]
["NADP metabolic process",7]
["NADPH binding",3]
["NADPH dehydrogenase activity",2]
["NADPH regeneration",1]
["NADPH-hemoprotein reductase activity",1]
["NADPH:quinone reductase activity",1]
["NADPHX epimerase activity",2]
["narrow pore channel activity",1]
["nBAF complex",1]
["ncRNA 3'-end processing",9]
["ncRNA 5'-end processing",2]
["ncRNA catabolic process",11]
["ncRNA export from nucleus",3]
["ncRNA metabolic process",104]
["ncRNA polyadenylation",2]
["ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process",1]
["ncRNA processing",83]
["Ndc80 complex",2]
["NEDD8 activating enzyme activity",2]
["NEDD8-specific protease activity",1]
["negative chemotaxis",1]
["negative gravitropism",1]
["negative regulation of abscisic acid-activated signaling pathway",8]
["negative regulation of actin filament depolymerization",1]
["negative regulation of actin filament polymerization",2]
["negative regulation of activin receptor signaling pathway",1]
["negative regulation of anthocyanin metabolic process",2]
["negative regulation of antisense RNA transcription",1]
["negative regulation of apoptotic process",9]
["negative regulation of apoptotic signaling pathway",2]
["negative regulation of ATP biosynthetic process",1]
["negative regulation of ATP metabolic process",1]
["negative regulation of autophagy",1]
["negative regulation of auxin mediated signaling pathway",2]
["negative regulation of auxin metabolic process",1]
["negative regulation of binding",2]
["negative regulation of biological process",205]
["negative regulation of biosynthetic process",54]
["negative regulation of BMP signaling pathway",1]
["negative regulation of bone development",1]
["negative regulation of brassinosteroid mediated signaling pathway",3]
["negative regulation of canonical Wnt signaling pathway",3]
["negative regulation of carbohydrate metabolic process",1]
["negative regulation of cardiac muscle cell apoptotic process",1]
["negative regulation of cardiac muscle cell proliferation",1]
["negative regulation of cardiac muscle tissue development",1]
["negative regulation of cardiac muscle tissue growth",1]
["negative regulation of catabolic process",8]
["negative regulation of catalytic activity",16]
["negative regulation of cation transmembrane transport",1]
["negative regulation of cell activation",1]
["negative regulation of cell communication",39]
["negative regulation of cell cycle",24]
["negative regulation of cell cycle G1/S phase transition",2]
["negative regulation of cell cycle G2/M phase transition",3]
["negative regulation of cell cycle phase transition",9]
["negative regulation of cell cycle process",19]
["negative regulation of cell death",14]
["negative regulation of cell development",2]
["negative regulation of cell differentiation",3]
["negative regulation of cell division",2]
["negative regulation of cell growth",2]
["negative regulation of cell population proliferation",8]
["negative regulation of cell projection organization",1]
["negative regulation of cell septum assembly",1]
["negative regulation of cell size",1]
["negative regulation of cellular amide metabolic process",5]
["negative regulation of cellular amine metabolic process",3]
["negative regulation of cellular amino acid metabolic process",3]
["negative regulation of cellular biosynthetic process",52]
["negative regulation of cellular carbohydrate metabolic process",1]
["negative regulation of cellular catabolic process",7]
["negative regulation of cellular component organization",24]
["negative regulation of cellular macromolecule biosynthetic process",44]
["negative regulation of cellular metabolic process",78]
["negative regulation of cellular process",145]
["negative regulation of cellular protein catabolic process",2]
["negative regulation of cellular protein metabolic process",22]
["negative regulation of cellular response to alcohol",8]
["negative regulation of cellular response to growth factor stimulus",1]
["negative regulation of cellular response to insulin stimulus",1]
["negative regulation of cellular response to transforming growth factor beta stimulus",1]
["negative regulation of chlorophyll biosynthetic process",1]
["negative regulation of chromatin organization",6]
["negative regulation of chromatin silencing",4]
["negative regulation of chromatin silencing at telomere",1]
["negative regulation of chromosome organization",13]
["negative regulation of chromosome segregation",4]
["negative regulation of chromosome separation",4]
["negative regulation of cysteine-type endopeptidase activity",1]
["negative regulation of cytokine production",2]
["negative regulation of cytokinesis",1]
["negative regulation of cytokinin dehydrogenase activity",1]
["negative regulation of cytoskeleton organization",2]
["negative regulation of defense response",15]
["negative regulation of defense response to bacterium",4]
["negative regulation of dendrite development",1]
["negative regulation of dendritic spine development",1]
["negative regulation of dephosphorylation",4]
["negative regulation of developmental growth",2]
["negative regulation of developmental process",23]
["negative regulation of division septum assembly",1]
["negative regulation of DNA binding",2]
["negative regulation of DNA biosynthetic process",3]
["negative regulation of DNA endoreduplication",5]
["negative regulation of DNA metabolic process",16]
["negative regulation of DNA recombination",4]
["negative regulation of DNA repair",1]
["negative regulation of DNA replication",9]
["negative regulation of DNA-binding transcription factor activity",1]
["negative regulation of DNA-dependent DNA replication",9]
["negative regulation of DNA-dependent DNA replication initiation",1]
["negative regulation of DNA-templated transcription- termination",1]
["negative regulation of double-strand break repair",1]
["negative regulation of double-strand break repair via single-strand annealing",1]
["negative regulation of embryonic development",1]
["negative regulation of endopeptidase activity",2]
["negative regulation of endoplasmic reticulum unfolded protein response",1]
["negative regulation of endosome organization",1]
["negative regulation of epidermal growth factor receptor signaling pathway",1]
["negative regulation of epithelial cell proliferation",1]
["negative regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["negative regulation of ERAD pathway",2]
["negative regulation of ERBB signaling pathway",1]
["negative regulation of ERK1 and ERK2 cascade",2]
["negative regulation of establishment of protein localization",1]
["negative regulation of ethylene biosynthetic process",3]
["negative regulation of ethylene-activated signaling pathway",5]
["negative regulation of exit from mitosis",1]
["negative regulation of exocytosis",1]
["negative regulation of exosomal secretion",1]
["negative regulation of extrinsic apoptotic signaling pathway",1]
["negative regulation of fertilization",1]
["negative regulation of flavonoid biosynthetic process",1]
["negative regulation of floral organ abscission",1]
["negative regulation of flower development",7]
["negative regulation of G1/S transition of mitotic cell cycle",2]
["negative regulation of G2/M transition of mitotic cell cycle",2]
["negative regulation of gene expression",69]
["negative regulation of gene expression- epigenetic",10]
["negative regulation of gene silencing",7]
["negative regulation of gene silencing by miRNA",1]
["negative regulation of gene silencing by RNA",1]
["negative regulation of gibberellic acid mediated signaling pathway",1]
["negative regulation of glycolytic process",1]
["negative regulation of growth",5]
["negative regulation of GTPase activity",3]
["negative regulation of heart growth",1]
["negative regulation of hemopoiesis",1]
["negative regulation of hippo signaling",1]
["negative regulation of histone acetylation",2]
["negative regulation of histone modification",2]
["negative regulation of hormone biosynthetic process",3]
["negative regulation of hormone metabolic process",3]
["negative regulation of hydrolase activity",9]
["negative regulation of I-kappaB kinase/NF-kappaB signaling",1]
["negative regulation of immune effector process",1]
["negative regulation of immune response",5]
["negative regulation of immune system process",5]
["negative regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["negative regulation of inflammatory response",1]
["negative regulation of innate immune response",3]
["negative regulation of insulin receptor signaling pathway",1]
["negative regulation of interleukin-8 production",2]
["negative regulation of intracellular estrogen receptor signaling pathway",1]
["negative regulation of intracellular signal transduction",14]
["negative regulation of intracellular steroid hormone receptor signaling pathway",1]
["negative regulation of intralumenal vesicle formation",1]
["negative regulation of intrinsic apoptotic signaling pathway",1]
["negative regulation of ion transmembrane transport",1]
["negative regulation of ion transmembrane transporter activity",1]
["negative regulation of ion transport",1]
["negative regulation of JNK cascade",1]
["negative regulation of kinase activity",4]
["negative regulation of lateral root development",1]
["negative regulation of leaf development",1]
["negative regulation of leaf senescence",1]
["negative regulation of leukocyte activation",1]
["negative regulation of leukocyte differentiation",1]
["negative regulation of leukocyte proliferation",1]
["negative regulation of lipid localization",1]
["negative regulation of lipid storage",1]
["negative regulation of long-day photoperiodism- flowering",1]
["negative regulation of macromolecule biosynthetic process",48]
["negative regulation of macromolecule metabolic process",103]
["negative regulation of MAP kinase activity",3]
["negative regulation of MAPK cascade",4]
["negative regulation of mast cell activation",1]
["negative regulation of mast cell activation involved in immune response",1]
["negative regulation of mast cell proliferation",1]
["negative regulation of meiosis I",2]
["negative regulation of meiotic cell cycle",4]
["negative regulation of meiotic cell cycle phase transition",1]
["negative regulation of meiotic chromosome separation",1]
["negative regulation of meiotic nuclear division",4]
["negative regulation of mesoderm development",1]
["negative regulation of metabolic process",116]
["negative regulation of metaphase/anaphase transition of cell cycle",4]
["negative regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["negative regulation of MHC class II biosynthetic process",2]
["negative regulation of mitotic cell cycle",13]
["negative regulation of mitotic cell cycle DNA replication",1]
["negative regulation of mitotic cell cycle phase transition",8]
["negative regulation of mitotic cytokinesis",1]
["negative regulation of mitotic cytokinetic process",1]
["negative regulation of mitotic metaphase/anaphase transition",4]
["negative regulation of mitotic nuclear division",6]
["negative regulation of mitotic sister chromatid segregation",4]
["negative regulation of mitotic sister chromatid separation",4]
["negative regulation of molecular function",19]
["negative regulation of mRNA catabolic process",2]
["negative regulation of mRNA metabolic process",2]
["negative regulation of multi-organism process",6]
["negative regulation of multicellular organism growth",1]
["negative regulation of multicellular organismal process",23]
["negative regulation of muscle cell apoptotic process",1]
["negative regulation of muscle organ development",1]
["negative regulation of muscle tissue development",1]
["negative regulation of myelination",1]
["negative regulation of myeloid cell differentiation",1]
["negative regulation of myeloid leukocyte differentiation",1]
["negative regulation of nervous system development",2]
["negative regulation of nervous system process",1]
["negative regulation of neurogenesis",1]
["negative regulation of neuron apoptotic process",1]
["negative regulation of neuron death",1]
["negative regulation of neuron differentiation",1]
["negative regulation of neuron projection development",1]
["negative regulation of nitrogen compound metabolic process",74]
["negative regulation of nodal signaling pathway",1]
["negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["negative regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["negative regulation of nuclear cell cycle DNA replication",1]
["negative regulation of nuclear division",9]
["negative regulation of nucleic acid-templated transcription",30]
["negative regulation of nucleobase-containing compound metabolic process",50]
["negative regulation of nucleotide biosynthetic process",1]
["negative regulation of nucleotide catabolic process",1]
["negative regulation of nucleotide metabolic process",1]
["negative regulation of olefin biosynthetic process",3]
["negative regulation of olefin metabolic process",3]
["negative regulation of organ growth",1]
["negative regulation of organelle organization",21]
["negative regulation of osteoclast development",1]
["negative regulation of osteoclast differentiation",1]
["negative regulation of oxidoreductase activity",1]
["negative regulation of peptidase activity",2]
["negative regulation of peptide secretion",1]
["negative regulation of peptidyl-lysine acetylation",3]
["negative regulation of peptidyl-serine phosphorylation",1]
["negative regulation of peptidyl-serine phosphorylation of STAT protein",1]
["negative regulation of phosphatase activity",4]
["negative regulation of phosphate metabolic process",11]
["negative regulation of phosphoprotein phosphatase activity",3]
["negative regulation of phosphorelay signal transduction system",5]
["negative regulation of phosphorus metabolic process",11]
["negative regulation of phosphorylation",7]
["negative regulation of photomorphogenesis",2]
["negative regulation of photosynthesis",4]
["negative regulation of photosynthesis- light reaction",4]
["negative regulation of plant-type hypersensitive response",1]
["negative regulation of post-embryonic development",15]
["negative regulation of posttranscriptional gene silencing",3]
["negative regulation of potassium ion transmembrane transport",1]
["negative regulation of potassium ion transmembrane transporter activity",1]
["negative regulation of potassium ion transport",1]
["negative regulation of pri-miRNA transcription by RNA polymerase II",1]
["negative regulation of production of miRNAs involved in gene silencing by miRNA",1]
["negative regulation of programmed cell death",11]
["negative regulation of proteasomal protein catabolic process",2]
["negative regulation of proteasomal ubiquitin-dependent protein catabolic process",2]
["negative regulation of protein acetylation",3]
["negative regulation of protein catabolic process",3]
["negative regulation of protein dephosphorylation",3]
["negative regulation of protein depolymerization",1]
["negative regulation of protein K63-linked ubiquitination",1]
["negative regulation of protein kinase activity",4]
["negative regulation of protein metabolic process",23]
["negative regulation of protein modification by small protein conjugation or removal",1]
["negative regulation of protein modification process",13]
["negative regulation of protein phosphorylation",6]
["negative regulation of protein polymerization",3]
["negative regulation of protein polyubiquitination",1]
["negative regulation of protein secretion",1]
["negative regulation of protein serine/threonine kinase activity",4]
["negative regulation of protein transport",1]
["negative regulation of protein ubiquitination",1]
["negative regulation of protein-containing complex assembly",3]
["negative regulation of protein-containing complex disassembly",2]
["negative regulation of proteolysis",4]
["negative regulation of proteolysis involved in cellular protein catabolic process",2]
["negative regulation of purine nucleotide biosynthetic process",1]
["negative regulation of purine nucleotide metabolic process",1]
["negative regulation of Ras protein signal transduction",2]
["negative regulation of reciprocal meiotic recombination",2]
["negative regulation of reproductive process",13]
["negative regulation of response to alcohol",8]
["negative regulation of response to biotic stimulus",4]
["negative regulation of response to DNA damage stimulus",1]
["negative regulation of response to endoplasmic reticulum stress",3]
["negative regulation of response to external stimulus",5]
["negative regulation of response to stimulus",57]
["negative regulation of RNA biosynthetic process",30]
["negative regulation of RNA catabolic process",3]
["negative regulation of RNA metabolic process",33]
["negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["negative regulation of secondary metabolite biosynthetic process",1]
["negative regulation of secretion",2]
["negative regulation of secretion by cell",2]
["negative regulation of seed germination",4]
["negative regulation of septation initiation signaling",1]
["negative regulation of sequestering of triglyceride",1]
["negative regulation of short-day photoperiodism- flowering",1]
["negative regulation of signal transduction",37]
["negative regulation of signaling",39]
["negative regulation of sinapate ester biosynthetic process",1]
["negative regulation of sister chromatid segregation",4]
["negative regulation of small GTPase mediated signal transduction",2]
["negative regulation of small molecule metabolic process",4]
["negative regulation of stress-activated MAPK cascade",1]
["negative regulation of stress-activated protein kinase signaling cascade",1]
["negative regulation of striated muscle cell apoptotic process",1]
["negative regulation of striated muscle tissue development",1]
["negative regulation of sulfur amino acid metabolic process",3]
["negative regulation of sulfur metabolic process",3]
["negative regulation of supramolecular fiber organization",2]
["negative regulation of synaptic transmission",2]
["negative regulation of synaptic transmission- glutamatergic",2]
["negative regulation of systemic acquired resistance",1]
["negative regulation of telomere maintenance",3]
["negative regulation of telomere maintenance via telomerase",3]
["negative regulation of telomere maintenance via telomere lengthening",3]
["negative regulation of tetrapyrrole biosynthetic process",1]
["negative regulation of tetrapyrrole metabolic process",1]
["negative regulation of transcription by RNA polymerase II",6]
["negative regulation of transcription regulatory region DNA binding",1]
["negative regulation of transcription- DNA-templated",27]
["negative regulation of transferase activity",4]
["negative regulation of transforming growth factor beta receptor signaling pathway",1]
["negative regulation of translation",5]
["negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",3]
["negative regulation of transmembrane transport",1]
["negative regulation of transport",3]
["negative regulation of transporter activity",1]
["negative regulation of ubiquitin-dependent protein catabolic process",2]
["negative regulation of vacuole fusion- non-autophagic",1]
["negative regulation of Wnt signaling pathway",3]
["nematode larval development",3]
["nervous system development",23]
["nervous system process",6]
["neural precursor cell proliferation",2]
["neural tube development",2]
["neural tube formation",1]
["neuroblast division",1]
["neuroblast proliferation",1]
["neurogenesis",17]
["neuromuscular junction development",1]
["neuromuscular process",1]
["neuron apoptotic process",1]
["neuron death",1]
["neuron development",7]
["neuron differentiation",10]
["neuron projection",6]
["neuron projection development",5]
["neuron projection guidance",1]
["neuron projection morphogenesis",2]
["neuron projection terminus",2]
["neuron spine",1]
["neuronal cell body",4]
["neuronal stem cell division",1]
["neurotransmitter binding",1]
["neurotransmitter biosynthetic process",5]
["neurotransmitter catabolic process",3]
["neurotransmitter metabolic process",8]
["neurotransmitter secretion",3]
["neurotransmitter transmembrane transporter activity",2]
["neurotransmitter transport",5]
["neutral amino acid transmembrane transporter activity",2]
["neutral amino acid transport",3]
["neutral lipid biosynthetic process",4]
["neutral lipid catabolic process",4]
["neutral lipid metabolic process",8]
["neutrophil activation",3]
["neutrophil activation involved in immune response",3]
["neutrophil degranulation",3]
["neutrophil mediated immunity",3]
["NF-kappaB binding",2]
["nickel cation binding",1]
["nicotinamidase activity",1]
["nicotinamide metabolic process",1]
["nicotinamide nucleotide biosynthetic process",14]
["nicotinamide nucleotide biosynthetic process from aspartate",1]
["nicotinamide nucleotide metabolic process",23]
["nicotinamide-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide adenylyltransferase activity",1]
["nicotinate-nucleotide diphosphorylase (carboxylating) activity",1]
["nitrate assimilation",1]
["nitrate metabolic process",1]
["nitrate reductase (NADH) activity",1]
["nitrate reductase activity",2]
["nitrate transmembrane transporter activity",2]
["nitrate transport",3]
["nitric oxide biosynthetic process",2]
["nitric oxide mediated signal transduction",1]
["nitric oxide metabolic process",2]
["nitrile biosynthetic process",1]
["nitrile metabolic process",1]
["nitrite reductase (NO-forming) activity",1]
["nitrite reductase activity",1]
["nitrite transport",1]
["nitrogen compound metabolic process",946]
["nitrogen compound transport",142]
["nitrogen cycle metabolic process",3]
["nitrogen utilization",2]
["NLS-bearing protein import into nucleus",6]
["NMS complex",1]
["Noc complex",1]
["Noc1p-Noc2p complex",1]
["Noc2p-Noc3p complex",1]
["nodulation",3]
["non-membrane-bounded organelle",290]
["non-motile cilium",1]
["non-motile cilium assembly",1]
["non-photoreactive DNA repair",2]
["non-reproductive fruiting body development",5]
["nonfunctional rRNA decay",2]
["nonphotochemical quenching",1]
["Notch signaling pathway",2]
["npBAF complex",1]
["nuclear body",35]
["nuclear cap binding complex",2]
["nuclear cell cycle DNA replication initiation",1]
["nuclear chromosome",49]
["nuclear chromosome segregation",32]
["nuclear dicing body",1]
["nuclear division",50]
["nuclear DNA replication",5]
["nuclear DNA-directed RNA polymerase complex",16]
["nuclear envelope",37]
["nuclear envelope organization",5]
["nuclear exosome (RNase complex)",5]
["nuclear export",23]
["nuclear export signal receptor activity",4]
["nuclear import signal receptor activity",1]
["nuclear lamina",2]
["nuclear localization sequence binding",5]
["nuclear lumen",265]
["nuclear matrix",7]
["nuclear membrane",13]
["nuclear membrane fusion",1]
["nuclear membrane reassembly",4]
["nuclear migration",2]
["nuclear migration along microfilament",2]
["nuclear mRNA surveillance",7]
["nuclear mRNA surveillance of mRNA 3'-end processing",1]
["nuclear mRNA surveillance of spliceosomal pre-mRNA splicing",2]
["nuclear ncRNA surveillance",5]
["nuclear origin of replication recognition complex",4]
["nuclear outer membrane-endoplasmic reticulum membrane network",75]
["nuclear periphery",14]
["nuclear polyadenylation-dependent mRNA catabolic process",2]
["nuclear polyadenylation-dependent ncRNA catabolic process",5]
["nuclear polyadenylation-dependent rRNA catabolic process",5]
["nuclear polyadenylation-dependent tRNA catabolic process",3]
["nuclear pore",11]
["nuclear pore central transport channel",2]
["nuclear pore cytoplasmic filaments",1]
["nuclear pore inner ring",1]
["nuclear pore localization",2]
["nuclear pore organization",2]
["nuclear pore outer ring",2]
["nuclear pre-replicative complex",3]
["nuclear proteasome complex",2]
["nuclear receptor binding",5]
["nuclear replication fork",8]
["nuclear replisome",3]
["nuclear retention of pre-mRNA at the site of transcription",4]
["nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription",1]
["nuclear retention of unspliced pre-mRNA at the site of transcription",2]
["nuclear RNA surveillance",7]
["nuclear speck",22]
["nuclear telomere cap complex",2]
["nuclear transport",35]
["nuclear ubiquitin ligase complex",3]
["nuclear-transcribed mRNA catabolic process",23]
["nuclear-transcribed mRNA catabolic process- 3'-5' exonucleolytic nonsense-mediated decay",2]
["nuclear-transcribed mRNA catabolic process- deadenylation-dependent decay",11]
["nuclear-transcribed mRNA catabolic process- deadenylation-independent decay",2]
["nuclear-transcribed mRNA catabolic process- exonucleolytic",8]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 3'-5'",5]
["nuclear-transcribed mRNA catabolic process- exonucleolytic- 5'-3'",1]
["nuclear-transcribed mRNA catabolic process- no-go decay",1]
["nuclear-transcribed mRNA catabolic process- non-stop decay",2]
["nuclear-transcribed mRNA catabolic process- nonsense-mediated decay",6]
["nuclear-transcribed mRNA poly(A) tail shortening",1]
["nuclease activity",54]
["nucleic acid binding",252]
["nucleic acid metabolic process",359]
["nucleic acid phosphodiester bond hydrolysis",75]
["nucleic acid transport",22]
["nucleic acid-templated transcription",33]
["nucleobase biosynthetic process",4]
["nucleobase catabolic process",7]
["nucleobase metabolic process",16]
["nucleobase transmembrane transporter activity",2]
["nucleobase transport",2]
["nucleobase-containing compound biosynthetic process",104]
["nucleobase-containing compound catabolic process",49]
["nucleobase-containing compound kinase activity",12]
["nucleobase-containing compound metabolic process",443]
["nucleobase-containing compound transmembrane transporter activity",14]
["nucleobase-containing compound transport",38]
["nucleobase-containing small molecule biosynthetic process",23]
["nucleobase-containing small molecule catabolic process",3]
["nucleobase-containing small molecule metabolic process",90]
["nucleocytoplasmic carrier activity",5]
["nucleocytoplasmic transport",35]
["nucleocytoplasmic transport complex",1]
["nucleoid",14]
["nucleoid DNA packaging",1]
["nucleolar chromatin",1]
["nucleolar ribonuclease P complex",1]
["nucleologenesis",1]
["nucleolus",110]
["nucleolus organization",2]
["nucleoplasm",135]
["nucleoside binding",15]
["nucleoside biosynthetic process",9]
["nucleoside bisphosphate biosynthetic process",5]
["nucleoside bisphosphate catabolic process",1]
["nucleoside bisphosphate metabolic process",10]
["nucleoside catabolic process",1]
["nucleoside diphosphate biosynthetic process",1]
["nucleoside diphosphate kinase activity",1]
["nucleoside diphosphate metabolic process",12]
["nucleoside diphosphate phosphorylation",11]
["nucleoside kinase activity",5]
["nucleoside metabolic process",15]
["nucleoside monophosphate biosynthetic process",19]
["nucleoside monophosphate kinase activity",4]
["nucleoside monophosphate metabolic process",30]
["nucleoside monophosphate phosphorylation",4]
["nucleoside phosphate binding",76]
["nucleoside phosphate biosynthetic process",43]
["nucleoside phosphate catabolic process",14]
["nucleoside phosphate metabolic process",68]
["nucleoside salvage",4]
["nucleoside transport",1]
["nucleoside triphosphate biosynthetic process",13]
["nucleoside triphosphate catabolic process",1]
["nucleoside triphosphate metabolic process",21]
["nucleoside-diphosphatase activity",4]
["nucleoside-triphosphatase activity",141]
["nucleoside-triphosphatase regulator activity",15]
["nucleoside-triphosphate diphosphatase activity",1]
["nucleosomal DNA binding",2]
["nucleosomal histone binding",1]
["nucleosome assembly",4]
["nucleosome binding",4]
["nucleosome disassembly",2]
["nucleosome mobilization",1]
["nucleosome organization",9]
["nucleosome positioning",1]
["nucleotidase activity",2]
["nucleotide binding",76]
["nucleotide biosynthetic process",43]
["nucleotide catabolic process",13]
["nucleotide diphosphatase activity",1]
["nucleotide metabolic process",68]
["nucleotide phosphorylation",12]
["nucleotide salvage",1]
["nucleotide transmembrane transport",8]
["nucleotide transmembrane transporter activity",8]
["nucleotide transport",9]
["nucleotide-excision repair",18]
["nucleotide-excision repair complex",5]
["nucleotide-excision repair factor 1 complex",2]
["nucleotide-excision repair factor 2 complex",1]
["nucleotide-excision repair involved in interstrand cross-link repair",1]
["nucleotide-excision repair- DNA damage recognition",4]
["nucleotide-excision repair- DNA gap filling",3]
["nucleotide-excision repair- DNA incision",6]
["nucleotide-excision repair- DNA incision- 5'-to lesion",5]
["nucleotide-excision repair- preincision complex assembly",4]
["nucleotide-excision repair- preincision complex stabilization",1]
["nucleotide-sugar biosynthetic process",5]
["nucleotide-sugar metabolic process",7]
["nucleotide-sugar transmembrane transport",10]
["nucleotide-sugar transmembrane transporter activity",7]
["nucleotidyltransferase activity",27]
["nucleus",592]
["nucleus localization",2]
["nucleus organization",17]
["NuRD complex",2]
["nurse cell apoptotic process",1]
["O-acetyltransferase activity",6]
["O-acyltransferase activity",12]
["O-methyltransferase activity",4]
["obsolete antibiotic transmembrane transporter activity",1]
["obsolete antibiotic transport",3]
["obsolete ATPase-coupled amide-transporter activity",2]
["obsolete axon part",3]
["obsolete axoneme part",3]
["obsolete cell",1914]
["obsolete cell cortex part",10]
["obsolete cell division site part",3]
["obsolete cell part",1914]
["obsolete cell projection part",18]
["obsolete cell septum part",1]
["obsolete cell wall part",3]
["obsolete cellular process regulating host cell cycle in response to virus",1]
["obsolete chloroplast part",305]
["obsolete chromosomal part",77]
["obsolete ciliary part",8]
["obsolete coenzyme binding",28]
["obsolete coenzyme biosynthetic process",40]
["obsolete coenzyme catabolic process",3]
["obsolete coenzyme metabolic process",62]
["obsolete coenzyme transmembrane transporter activity",2]
["obsolete coenzyme transport",2]
["obsolete cofactor binding",40]
["obsolete cofactor biosynthetic process",59]
["obsolete cofactor catabolic process",14]
["obsolete cofactor metabolic process",102]
["obsolete cofactor transmembrane transporter activity",3]
["obsolete cofactor transport",9]
["obsolete contractile fiber part",1]
["obsolete cytoplasmic part",1313]
["obsolete cytoplasmic vesicle part",46]
["obsolete cytoskeletal part",55]
["obsolete cytosolic part",30]
["obsolete DNA strand renaturation",1]
["obsolete endoplasmic reticulum part",83]
["obsolete endosomal part",31]
["obsolete external encapsulating structure part",3]
["obsolete extracellular region part",12]
["obsolete Golgi apparatus part",84]
["obsolete intracellular organelle part",975]
["obsolete intracellular part",1799]
["obsolete membrane part",236]
["obsolete microbody part",10]
["obsolete microtubule organizing center part",6]
["obsolete mitochondrial membrane part",21]
["obsolete mitochondrial part",76]
["obsolete modulation of growth of symbiont involved in interaction with host",1]
["obsolete movement in environment of other organism involved in symbiotic interaction",2]
["obsolete movement in other organism involved in symbiotic interaction",1]
["obsolete multi organism cell adhesion",1]
["obsolete multi-organism intracellular transport",1]
["obsolete negative regulation of chromatin silencing involved in replicative cell aging",1]
["obsolete negative regulation of coenzyme metabolic process",1]
["obsolete negative regulation of cofactor metabolic process",2]
["obsolete negative regulation of growth of symbiont in host",1]
["obsolete negative regulation of growth of symbiont involved in interaction with host",1]
["obsolete neuron part",9]
["obsolete non-recombinational repair",8]
["obsolete nuclear chromosome part",46]
["obsolete nuclear part",319]
["obsolete nuclear telomeric heterochromatin",1]
["obsolete nucleolar part",14]
["obsolete nucleoplasm part",77]
["obsolete organelle part",976]
["obsolete other organism",1]
["obsolete other organism cell",1]
["obsolete oxidation-reduction process",192]
["obsolete oxidoreductase activity- acting on diphenols and related substances as donors- cytochrome as acceptor",1]
["obsolete oxidoreduction coenzyme metabolic process",28]
["obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction",1]
["obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response",1]
["obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction",3]
["obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response",3]
["obsolete pathogenesis",1]
["obsolete pattern binding",7]
["obsolete peroxisomal part",10]
["obsolete plasma membrane bounded cell projection part",18]
["obsolete plasma membrane part",47]
["obsolete plastid part",312]
["obsolete positive regulation of cofactor metabolic process",1]
["obsolete positive regulation of protein import into nucleus- translocation",1]
["obsolete positive regulation of receptor biosynthetic process",1]
["obsolete progressive alteration of chromatin involved in replicative cell aging",1]
["obsolete protein import into nucleus- translocation",3]
["obsolete protein transporter activity",18]
["obsolete protein-cofactor linkage",3]
["obsolete purine NTP-dependent helicase activity",38]
["obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of coenzyme metabolic process",3]
["obsolete regulation of cofactor metabolic process",8]
["obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of growth of symbiont in host",1]
["obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter",1]
["obsolete regulation of protein import into nucleus- translocation",1]
["obsolete regulation of receptor biosynthetic process",2]
["obsolete regulation of transcription involved in cell fate commitment",1]
["obsolete replicative cell aging",1]
["obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly",1]
["obsolete RNA polymerase II transcription regulator recruiting activity",3]
["obsolete sperm part",1]
["obsolete synapse part",7]
["obsolete telomeric heterochromatin",1]
["obsolete thylakoid part",78]
["obsolete transcription factor activity- core RNA polymerase binding",4]
["obsolete transcription factor activity- core RNA polymerase II binding",2]
["obsolete transcription factor activity- protein binding",8]
["obsolete transcription factor activity- RNA polymerase II transcription factor binding",4]
["obsolete transcription factor activity- transcription factor binding",4]
["obsolete transcription regulator recruiting activity",3]
["obsolete vacuolar part",100]
["odontogenesis",1]
["odontogenesis of dentin-containing tooth",1]
["olefin biosynthetic process",1]
["olefin metabolic process",1]
["oligodendrocyte development",2]
["oligodendrocyte differentiation",2]
["oligopeptide binding",1]
["oligopeptide transmembrane transport",2]
["oligopeptide transmembrane transporter activity",1]
["oligopeptide transport",3]
["oligosaccharide binding",1]
["oligosaccharide biosynthetic process",7]
["oligosaccharide catabolic process",7]
["oligosaccharide metabolic process",18]
["oligosaccharide transmembrane transporter activity",2]
["oligosaccharide transport",3]
["oligosaccharide-lipid intermediate biosynthetic process",8]
["oligosaccharyl transferase activity",3]
["oligosaccharyltransferase complex",5]
["omega peptidase activity",1]
["omega-6 fatty acid desaturase activity",1]
["one-carbon compound transport",2]
["one-carbon metabolic process",4]
["oocyte development",2]
["oocyte differentiation",2]
["oocyte growth",1]
["oogenesis",4]
["open tracheal system development",1]
["organ boundary specification between lateral organs and the meristem",1]
["organ growth",1]
["organellar large ribosomal subunit",2]
["organellar ribosome",4]
["organellar small ribosomal subunit",1]
["organelle",1564]
["organelle assembly",54]
["organelle disassembly",13]
["organelle envelope",245]
["organelle envelope lumen",1]
["organelle fission",63]
["organelle fusion",13]
["organelle inheritance",1]
["organelle inner membrane",62]
["organelle localization",28]
["organelle localization by membrane tethering",6]
["organelle lumen",305]
["organelle membrane",249]
["organelle membrane contact site",3]
["organelle membrane fusion",10]
["organelle organization",350]
["organelle outer membrane",23]
["organelle subcompartment",228]
["organelle transport along microtubule",3]
["organic acid binding",10]
["organic acid biosynthetic process",82]
["organic acid catabolic process",33]
["organic acid metabolic process",178]
["organic acid transmembrane transport",27]
["organic acid transmembrane transporter activity",27]
["organic acid transport",30]
["organic anion transmembrane transporter activity",40]
["organic anion transport",49]
["organic cation transmembrane transporter activity",4]
["organic cation transport",6]
["organic cyclic compound binding",335]
["organic cyclic compound biosynthetic process",185]
["organic cyclic compound catabolic process",70]
["organic cyclic compound metabolic process",539]
["organic heteropentacyclic compound biosynthetic process",1]
["organic heteropentacyclic compound metabolic process",1]
["organic hydroxy compound biosynthetic process",37]
["organic hydroxy compound catabolic process",9]
["organic hydroxy compound metabolic process",53]
["organic hydroxy compound transmembrane transporter activity",4]
["organic hydroxy compound transport",6]
["organic substance biosynthetic process",472]
["organic substance catabolic process",224]
["organic substance metabolic process",1155]
["organic substance transport",176]
["organonitrogen compound biosynthetic process",238]
["organonitrogen compound catabolic process",118]
["organonitrogen compound metabolic process",628]
["organophosphate biosynthetic process",81]
["organophosphate catabolic process",21]
["organophosphate ester transmembrane transporter activity",8]
["organophosphate ester transport",12]
["organophosphate metabolic process",123]
["origin recognition complex",4]
["ornithine biosynthetic process",1]
["ornithine metabolic process",3]
["ornithine transport",1]
["ossification",2]
["osteoblast differentiation",1]
["osteoblast proliferation",1]
["other organism part",1]
["otic vesicle development",1]
["otic vesicle morphogenesis",1]
["outer acrosomal membrane",1]
["outer dynein arm assembly",1]
["outer membrane",23]
["outer membrane-bounded periplasmic space",1]
["outer mitochondrial membrane protein complex",1]
["outward rectifier potassium channel activity",1]
["ovarian follicle cell development",1]
["ovarian follicle cell migration",1]
["ovarian follicle development",1]
["oxaloacetate metabolic process",1]
["oxaloacetate transmembrane transporter activity",2]
["oxaloacetate transport",2]
["oxaloacetate(2-) transmembrane transport",2]
["oxazole or thiazole biosynthetic process",1]
["oxazole or thiazole metabolic process",1]
["oxidative demethylation",1]
["oxidative DNA demethylation",1]
["oxidative phosphorylation",3]
["oxidative photosynthetic carbon pathway",2]
["oxidative single-stranded DNA demethylation",1]
["oxidized base lesion DNA N-glycosylase activity",1]
["oxidized DNA binding",1]
["oxidized purine DNA binding",1]
["oxidized purine nucleobase lesion DNA N-glycosylase activity",1]
["oxidoreductase activity",157]
["oxidoreductase activity- acting on a sulfur group of donors",10]
["oxidoreductase activity- acting on a sulfur group of donors- disulfide as acceptor",2]
["oxidoreductase activity- acting on a sulfur group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- NAD(P) as acceptor",5]
["oxidoreductase activity- acting on a sulfur group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on a sulfur group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on CH or CH2 groups",1]
["oxidoreductase activity- acting on CH or CH2 groups- with an iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on CH-OH group of donors",30]
["oxidoreductase activity- acting on diphenols and related substances as donors",4]
["oxidoreductase activity- acting on diphenols and related substances as donors- oxygen as acceptor",3]
["oxidoreductase activity- acting on iron-sulfur proteins as donors",2]
["oxidoreductase activity- acting on iron-sulfur proteins as donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions",8]
["oxidoreductase activity- acting on metal ions- flavin as acceptor",1]
["oxidoreductase activity- acting on metal ions- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on metal ions- oxygen as acceptor",1]
["oxidoreductase activity- acting on NAD(P)H",19]
["oxidoreductase activity- acting on NAD(P)H- heme protein as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- NAD(P) as acceptor",2]
["oxidoreductase activity- acting on NAD(P)H- quinone or similar compound as acceptor",5]
["oxidoreductase activity- acting on other nitrogenous compounds as donors",4]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on other nitrogenous compounds as donors- with NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen",24]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- NAD(P)H as one donor- and incorporation of one atom of oxygen",14]
["oxidoreductase activity- acting on paired donors- with incorporation or reduction of molecular oxygen- reduced iron-sulfur protein as one donor- and incorporation of one atom of oxygen",1]
["oxidoreductase activity- acting on paired donors- with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water",2]
["oxidoreductase activity- acting on peroxide as acceptor",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen",6]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)",1]
["oxidoreductase activity- acting on single donors with incorporation of molecular oxygen- incorporation of two atoms of oxygen",4]
["oxidoreductase activity- acting on superoxide radicals as acceptor",1]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors",7]
["oxidoreductase activity- acting on the aldehyde or oxo group of donors- NAD or NADP as acceptor",7]
["oxidoreductase activity- acting on the CH-CH group of donors",19]
["oxidoreductase activity- acting on the CH-CH group of donors- cytochrome as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- iron-sulfur protein as acceptor",1]
["oxidoreductase activity- acting on the CH-CH group of donors- NAD or NADP as acceptor",6]
["oxidoreductase activity- acting on the CH-CH group of donors- oxygen as acceptor",4]
["oxidoreductase activity- acting on the CH-CH group of donors- quinone or related compound as acceptor",2]
["oxidoreductase activity- acting on the CH-NH group of donors",9]
["oxidoreductase activity- acting on the CH-NH group of donors- NAD or NADP as acceptor",5]
["oxidoreductase activity- acting on the CH-NH group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-NH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors",2]
["oxidoreductase activity- acting on the CH-NH2 group of donors- NAD or NADP as acceptor",1]
["oxidoreductase activity- acting on the CH-NH2 group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-OH group of donors- cytochrome as acceptor",2]
["oxidoreductase activity- acting on the CH-OH group of donors- NAD or NADP as acceptor",28]
["oxidoreductase activity- acting on the CH-OH group of donors- oxygen as acceptor",1]
["oxidoreductase activity- acting on the CH-OH group of donors- quinone or similar compound as acceptor",1]
["oxidoreductase complex",11]
["oxo-acid-lyase activity",2]
["oxoacid metabolic process",178]
["oxoglutarate:malate antiporter activity",1]
["oxygen-dependent protoporphyrinogen oxidase activity",1]
["P granule",1]
["P-body",10]
["P-body assembly",2]
["p-coumarate 3-hydroxylase activity",1]
["p-coumaryl alcohol transport",1]
["P-P-bond-hydrolysis-driven protein transmembrane transporter activity",6]
["P-type ion transporter activity",1]
["P-type proton-exporting transporter activity",4]
["P4 peroxisome",1]
["palisade mesophyll development",1]
["pallium development",2]
["palmitoyl hydrolase activity",1]
["palmitoyl-(protein) hydrolase activity",1]
["palmitoyltransferase activity",1]
["palmitoyltransferase complex",2]
["PAM complex- Tim23 associated import motor",1]
["pancreas development",2]
["pantothenate biosynthetic process",1]
["pantothenate metabolic process",1]
["para-aminobenzoic acid biosynthetic process",1]
["para-aminobenzoic acid metabolic process",1]
["paraspeckles",1]
["Parkin-FBXW7-Cul1 ubiquitin ligase complex",1]
["passive transmembrane transporter activity",19]
["pattern recognition receptor signaling pathway",1]
["pattern specification process",35]
["PcG protein complex",2]
["PDZ domain binding",1]
["PeBoW complex",3]
["pectic galactan metabolic process",1]
["pectin biosynthetic process",7]
["pectin catabolic process",1]
["pectin metabolic process",11]
["pectinesterase activity",2]
["pectinesterase inhibitor activity",1]
["pectoral fin development",2]
["pectoral fin morphogenesis",2]
["pentose biosynthetic process",1]
["pentose catabolic process",2]
["pentose metabolic process",5]
["pentose-phosphate shunt",4]
["pentose-phosphate shunt- non-oxidative branch",2]
["pentose-phosphate shunt- oxidative branch",2]
["pentosyltransferase activity",11]
["peptidase activator activity",2]
["peptidase activity",100]
["peptidase complex",21]
["peptidase inhibitor activity",1]
["peptidase regulator activity",3]
["peptide binding",14]
["peptide biosynthetic process",61]
["peptide catabolic process",2]
["peptide deformylase activity",1]
["peptide metabolic process",69]
["peptide N-acetyltransferase activity",4]
["peptide receptor activity",1]
["peptide secretion",1]
["peptide transmembrane transporter activity",7]
["peptide transport",100]
["peptide-lysine-N-acetyltransferase activity",4]
["peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity",1]
["peptide-O-fucosyltransferase activity",1]
["peptidoglycan catabolic process",1]
["peptidoglycan metabolic process",1]
["peptidoglycan-based cell wall",1]
["peptidoglycan-based cell wall biogenesis",1]
["peptidyl-amino acid modification",88]
["peptidyl-arginine methylation",7]
["peptidyl-arginine methylation- to asymmetrical-dimethyl arginine",4]
["peptidyl-arginine methylation- to symmetrical-dimethyl arginine",1]
["peptidyl-arginine modification",7]
["peptidyl-arginine N-methylation",6]
["peptidyl-arginine omega-N-methylation",5]
["peptidyl-asparagine modification",8]
["peptidyl-diphthamide biosynthetic process from peptidyl-histidine",3]
["peptidyl-diphthamide metabolic process",3]
["peptidyl-glutamine modification",1]
["peptidyl-glycine modification",1]
["peptidyl-histidine modification",6]
["peptidyl-histidine phosphorylation",3]
["peptidyl-lysine acetylation",8]
["peptidyl-lysine dimethylation",1]
["peptidyl-lysine methylation",16]
["peptidyl-lysine modification",33]
["peptidyl-lysine modification to peptidyl-hypusine",2]
["peptidyl-lysine monomethylation",2]
["peptidyl-lysine trimethylation",5]
["peptidyl-methionine modification",1]
["peptidyl-proline 4-dioxygenase activity",1]
["peptidyl-proline dioxygenase activity",1]
["peptidyl-proline hydroxylation",1]
["peptidyl-proline hydroxylation to 4-hydroxy-L-proline",1]
["peptidyl-proline modification",22]
["peptidyl-prolyl cis-trans isomerase activity",17]
["peptidyl-pyroglutamic acid biosynthetic process- using glutaminyl-peptide cyclotransferase",1]
["peptidyl-serine dephosphorylation",1]
["peptidyl-serine modification",8]
["peptidyl-serine phosphorylation",8]
["peptidyl-threonine dephosphorylation",3]
["peptidyl-threonine modification",2]
["peptidyl-threonine phosphorylation",2]
["peptidyl-tyrosine dephosphorylation",5]
["peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity",1]
["peptidyl-tyrosine modification",2]
["peptidyl-tyrosine phosphorylation",2]
["pericentric heterochromatin assembly",2]
["perikaryon",1]
["perinuclear region of cytoplasm",14]
["peripheral nervous system development",2]
["periplasmic space",2]
["peroxidase activity",6]
["peroxiredoxin activity",1]
["peroxisomal membrane",10]
["peroxisomal membrane transport",3]
["peroxisomal transport",5]
["peroxisome",47]
["peroxisome fission",3]
["peroxisome matrix targeting signal-1 binding",1]
["peroxisome membrane targeting sequence binding",1]
["peroxisome organization",9]
["peroxisome targeting sequence binding",2]
["PET complex",1]
["petal development",2]
["petal vascular tissue pattern formation",1]
["pH reduction",4]
["phagocytic vesicle",3]
["phagocytic vesicle membrane",1]
["phagocytosis",3]
["phagolysosome assembly",2]
["phagolysosome assembly involved in apoptotic cell clearance",2]
["phagophore assembly site",7]
["phagophore assembly site membrane",4]
["phagosome acidification",2]
["phagosome acidification involved in apoptotic cell clearance",1]
["phagosome maturation",3]
["phagosome maturation involved in apoptotic cell clearance",2]
["phagosome-lysosome fusion",1]
["phenol-containing compound catabolic process",3]
["phenol-containing compound metabolic process",3]
["phenylalanine ammonia-lyase activity",1]
["phenylalanine-tRNA ligase activity",1]
["phenylalanine-tRNA ligase complex",1]
["phenylalanyl-tRNA aminoacylation",2]
["phenylpropanoid biosynthetic process",11]
["phenylpropanoid catabolic process",1]
["phenylpropanoid metabolic process",15]
["pheophytinase activity",1]
["phloem development",1]
["phloem or xylem histogenesis",17]
["phloem sucrose loading",1]
["phloem transport",2]
["phosphatase activity",51]
["phosphatase binding",5]
["phosphatase complex",2]
["phosphatase inhibitor activity",4]
["phosphatase regulator activity",9]
["phosphate ion binding",1]
["phosphate ion homeostasis",2]
["phosphate ion transmembrane transport",4]
["phosphate ion transmembrane transporter activity",4]
["phosphate ion transport",6]
["phosphate-containing compound metabolic process",269]
["phosphatidate cytidylyltransferase activity",1]
["phosphatidate phosphatase activity",1]
["phosphatidic acid binding",3]
["phosphatidic acid biosynthetic process",1]
["phosphatidic acid metabolic process",1]
["phosphatidylcholine 12-monooxygenase activity",1]
["phosphatidylcholine biosynthetic process",2]
["phosphatidylcholine catabolic process",1]
["phosphatidylcholine metabolic process",3]
["phosphatidylcholine phospholipase C activity",1]
["phosphatidylcholine transporter activity",1]
["phosphatidylethanolamine catabolic process",1]
["phosphatidylethanolamine metabolic process",1]
["phosphatidylglycerol biosynthetic process",2]
["phosphatidylglycerol metabolic process",4]
["phosphatidylinositol 3-kinase complex",1]
["phosphatidylinositol 3-kinase complex- class III",1]
["phosphatidylinositol 3-kinase complex- class III- type I",1]
["phosphatidylinositol 3-kinase complex- class III- type II",1]
["phosphatidylinositol 3-kinase signaling",1]
["phosphatidylinositol binding",10]
["phosphatidylinositol biosynthetic process",7]
["phosphatidylinositol bisphosphate binding",2]
["phosphatidylinositol bisphosphate phosphatase activity",3]
["phosphatidylinositol dephosphorylation",1]
["phosphatidylinositol kinase activity",2]
["phosphatidylinositol metabolic process",10]
["phosphatidylinositol monophosphate phosphatase activity",1]
["phosphatidylinositol N-acetylglucosaminyltransferase activity",1]
["phosphatidylinositol phosphate 4-phosphatase activity",1]
["phosphatidylinositol phosphate 5-phosphatase activity",3]
["phosphatidylinositol phosphate binding",3]
["phosphatidylinositol phosphate biosynthetic process",2]
["phosphatidylinositol phosphate phosphatase activity",3]
["phosphatidylinositol transfer activity",1]
["phosphatidylinositol trisphosphate phosphatase activity",1]
["phosphatidylinositol-3-4-5-trisphosphate 5-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate 3-phosphatase activity",1]
["phosphatidylinositol-3-4-bisphosphate phosphatase activity",1]
["phosphatidylinositol-3-5-bisphosphate 5-phosphatase activity",2]
["phosphatidylinositol-3-5-bisphosphate binding",2]
["phosphatidylinositol-3-5-bisphosphate phosphatase activity",2]
["phosphatidylinositol-3-phosphatase activity",1]
["phosphatidylinositol-3-phosphate binding",2]
["phosphatidylinositol-3-phosphate biosynthetic process",2]
["phosphatidylinositol-4-phosphate phosphatase activity",1]
["phosphatidylinositol-5-phosphate binding",1]
["phosphatidylinositol-mediated signaling",1]
["phosphatidylserine biosynthetic process",2]
["phosphatidylserine metabolic process",2]
["phosphoadenylyl-sulfate reductase (thioredoxin) activity",1]
["phosphodiesterase I activity",1]
["phosphoenolpyruvate carboxykinase activity",2]
["phosphoenolpyruvate carboxylase activity",2]
["phosphoethanolamine N-methyltransferase activity",1]
["phosphofructokinase activity",3]
["phosphoglucomutase activity",2]
["phosphogluconate dehydrogenase (decarboxylating) activity",1]
["phosphoglycerate mutase activity",1]
["phospholipase A1 activity",2]
["phospholipase A2 activity",3]
["phospholipase activator activity",1]
["phospholipase activity",10]
["phospholipase C activity",1]
["phospholipase D activity",2]
["phospholipid binding",17]
["phospholipid biosynthetic process",30]
["phospholipid catabolic process",4]
["phospholipid dephosphorylation",1]
["phospholipid homeostasis",1]
["phospholipid metabolic process",41]
["phospholipid translocation",2]
["phospholipid transport",3]
["phospholipid transporter activity",2]
["phospholipid:diacylglycerol acyltransferase activity",1]
["phosphomethylethanolamine N-methyltransferase activity",1]
["phosphomethylpyrimidine kinase activity",1]
["phosphopantothenoylcysteine decarboxylase activity",1]
["phosphoprotein binding",3]
["phosphoprotein phosphatase activity",12]
["phosphopyruvate hydratase activity",1]
["phosphorelay response regulator activity",5]
["phosphorelay sensor kinase activity",1]
["phosphorelay signal transduction system",16]
["phosphoribosyl-AMP cyclohydrolase activity",1]
["phosphoribosyl-ATP diphosphatase activity",1]
["phosphoribosylaminoimidazolesuccinocarboxamide synthase activity",1]
["phosphoric diester hydrolase activity",6]
["phosphoric ester hydrolase activity",57]
["phosphorus metabolic process",276]
["phosphorylase kinase regulator activity",1]
["phosphorylated carbohydrate dephosphorylation",4]
["phosphorylation",136]
["phosphorylation of RNA polymerase II C-terminal domain",2]
["phosphoserine phosphatase activity",1]
["phosphoserine residue binding",1]
["phosphothreonine residue binding",1]
["phosphotransferase activity- alcohol group as acceptor",106]
["phosphotransferase activity- carboxyl group as acceptor",2]
["phosphotransferase activity- for other substituted phosphate groups",2]
["phosphotransferase activity- nitrogenous group as acceptor",3]
["phosphotransferase activity- phosphate group as acceptor",6]
["photoinhibition",4]
["photomorphogenesis",13]
["photoperiodism",12]
["photoperiodism- flowering",9]
["photoprotection",3]
["photoreactive repair",1]
["photoreceptor activity",1]
["photoreceptor cell cilium",1]
["photoreceptor connecting cilium",1]
["photorespiration",7]
["photosynthesis",31]
["photosynthesis- dark reaction",4]
["photosynthesis- light harvesting",7]
["photosynthesis- light harvesting in photosystem I",3]
["photosynthesis- light reaction",25]
["photosynthetic acclimation",1]
["photosynthetic electron transport chain",8]
["photosynthetic electron transport in photosystem I",2]
["photosynthetic electron transport in photosystem II",3]
["photosynthetic membrane",68]
["photosystem",1]
["photosystem I assembly",4]
["photosystem II",1]
["photosystem II antenna complex",1]
["photosystem II assembly",7]
["photosystem II oxygen evolving complex assembly",2]
["photosystem II repair",3]
["photosystem II stabilization",1]
["photosystem stoichiometry adjustment",2]
["phototransduction",2]
["phototropism",1]
["phragmoplast",10]
["phragmoplast microtubule organization",1]
["phyllome development",77]
["phylloquinone biosynthetic process",1]
["phylloquinone metabolic process",1]
["phytoalexin biosynthetic process",1]
["phytoalexin metabolic process",1]
["phytoceramidase activity",1]
["phytochelatin biosynthetic process",1]
["phytochelatin metabolic process",1]
["phytochromobilin biosynthetic process",1]
["phytochromobilin metabolic process",1]
["phytochromobilin:ferredoxin oxidoreductase activity",1]
["phytol kinase activity",1]
["phytosphingosine biosynthetic process",1]
["phytosphingosine metabolic process",2]
["phytosteroid biosynthetic process",5]
["phytosteroid metabolic process",5]
["phytyl diphosphate biosynthetic process",1]
["phytyl diphosphate metabolic process",1]
["piecemeal microautophagy of the nucleus",2]
["pigment accumulation",2]
["pigment accumulation in response to UV light",2]
["pigment accumulation in tissues",2]
["pigment accumulation in tissues in response to UV light",2]
["pigment binding",3]
["pigment biosynthetic process",28]
["pigment catabolic process",3]
["pigment metabolic process",34]
["pigmentation",3]
["pinocytosis",1]
["pinosome",1]
["piRNA metabolic process",1]
["plant epidermal cell differentiation",25]
["plant epidermis development",44]
["plant epidermis morphogenesis",18]
["plant organ development",162]
["plant organ formation",25]
["plant organ morphogenesis",72]
["plant organ senescence",22]
["plant ovule development",10]
["plant-type cell wall",26]
["plant-type cell wall assembly",1]
["plant-type cell wall biogenesis",20]
["plant-type cell wall cellulose biosynthetic process",1]
["plant-type cell wall cellulose metabolic process",3]
["plant-type cell wall loosening",1]
["plant-type cell wall modification",3]
["plant-type cell wall modification involved in multidimensional cell growth",1]
["plant-type cell wall organization",15]
["plant-type cell wall organization or biogenesis",28]
["plant-type hypersensitive response",5]
["plant-type ovary development",10]
["plant-type primary cell wall biogenesis",1]
["plant-type secondary cell wall biogenesis",5]
["plant-type sporogenesis",3]
["plant-type vacuole",31]
["plant-type vacuole membrane",21]
["plasma membrane",297]
["plasma membrane bounded cell projection",30]
["plasma membrane bounded cell projection assembly",10]
["plasma membrane bounded cell projection cytoplasm",6]
["plasma membrane bounded cell projection morphogenesis",2]
["plasma membrane bounded cell projection organization",15]
["plasma membrane fusion",1]
["plasma membrane protein complex",5]
["plasma membrane pyruvate transport",1]
["plasma membrane region",7]
["plasmalogen synthase activity",1]
["plasmid maintenance",1]
["plasmodesma",123]
["plasmodesma organization",3]
["plasmodesmata-mediated intercellular transport",2]
["plastid",491]
["plastid chromosome",6]
["plastid DNA metabolic process",1]
["plastid DNA packaging",1]
["plastid DNA replication",1]
["plastid envelope",164]
["plastid fission",7]
["plastid inner membrane",23]
["plastid large ribosomal subunit",1]
["plastid localization",3]
["plastid membrane",42]
["plastid membrane organization",12]
["plastid nucleoid",11]
["plastid organization",64]
["plastid outer membrane",15]
["plastid ribosome",2]
["plastid stroma",175]
["plastid thylakoid",82]
["plastid thylakoid lumen",2]
["plastid thylakoid membrane",62]
["plastid transcription",3]
["plastid translation",5]
["plastid-encoded plastid RNA polymerase complex",3]
["plastoglobule",19]
["plastoglobule organization",2]
["plastoquinone biosynthetic process",1]
["platelet degranulation",1]
["plus-end specific microtubule depolymerization",1]
["PML body",2]
["podosome",1]
["polar nucleus fusion",3]
["polarity specification of adaxial/abaxial axis",1]
["pole plasm",1]
["pollen development",52]
["pollen exine formation",8]
["pollen germination",13]
["pollen hydration",1]
["pollen maturation",4]
["pollen sperm cell differentiation",2]
["pollen tube",7]
["pollen tube adhesion",1]
["pollen tube development",19]
["pollen tube growth",11]
["pollen tube guidance",6]
["pollen tube reception",3]
["pollen tube tip",1]
["pollen wall assembly",11]
["pollen-pistil interaction",4]
["pollination",34]
["poly-purine tract binding",1]
["poly-pyrimidine tract binding",8]
["poly(A) binding",1]
["poly(A)+ mRNA export from nucleus",4]
["poly(ADP-ribose) glycohydrolase activity",1]
["poly(U) RNA binding",6]
["polyadenylation-dependent mRNA catabolic process",2]
["polyadenylation-dependent ncRNA catabolic process",6]
["polyadenylation-dependent RNA catabolic process",6]
["polyadenylation-dependent snoRNA 3'-end processing",2]
["polyamine binding",1]
["polyamine biosynthetic process",4]
["polyamine catabolic process",1]
["polyamine metabolic process",5]
["polyamine oxidase activity",1]
["polyamine transmembrane transport",1]
["polyamine transmembrane transporter activity",1]
["polyamine transport",2]
["polygalacturonate 4-alpha-galacturonosyltransferase activity",5]
["polyketide biosynthetic process",1]
["polyketide metabolic process",1]
["polymeric cytoskeletal fiber",19]
["polynucleotide 5' dephosphorylation",1]
["polynucleotide 5'-hydroxyl-kinase activity",2]
["polynucleotide 5'-phosphatase activity",1]
["polynucleotide adenylyltransferase activity",3]
["polynucleotide dephosphorylation",1]
["polynucleotide phosphatase activity",1]
["polyol biosynthetic process",11]
["polyol catabolic process",5]
["polyol metabolic process",18]
["polyol transmembrane transporter activity",2]
["polyol transport",2]
["polyphosphate biosynthetic process",1]
["polyphosphate metabolic process",1]
["polyprenol biosynthetic process",1]
["polyprenol metabolic process",1]
["polyprenyltransferase activity",2]
["polyribonucleotide nucleotidyltransferase activity",1]
["polysaccharide binding",7]
["polysaccharide biosynthetic process",30]
["polysaccharide catabolic process",20]
["polysaccharide localization",7]
["polysaccharide metabolic process",57]
["polysomal ribosome",7]
["polysome",11]
["polyubiquitin modification-dependent protein binding",3]
["polyuridylation-dependent mRNA catabolic process",1]
["porphobilinogen synthase activity",1]
["porphyrin-containing compound biosynthetic process",14]
["porphyrin-containing compound catabolic process",4]
["porphyrin-containing compound metabolic process",20]
["positive chemotaxis",6]
["positive gravitropism",3]
["positive regulation by host of viral genome replication",1]
["positive regulation by host of viral process",2]
["positive regulation of abscisic acid-activated signaling pathway",5]
["positive regulation of actin filament polymerization",5]
["positive regulation of actin nucleation",2]
["positive regulation of adaptive immune response",1]
["positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains",1]
["positive regulation of alcohol biosynthetic process",1]
["positive regulation of angiogenesis",1]
["positive regulation of anion channel activity",1]
["positive regulation of anion transmembrane transport",1]
["positive regulation of anion transport",2]
["positive regulation of apoptotic process",3]
["positive regulation of apoptotic signaling pathway",1]
["positive regulation of asexual reproduction",1]
["positive regulation of ATP biosynthetic process",1]
["positive regulation of ATP metabolic process",1]
["positive regulation of ATPase activity",3]
["positive regulation of autophagy",6]
["positive regulation of auxin mediated signaling pathway",1]
["positive regulation of B cell activation",1]
["positive regulation of B cell mediated immunity",1]
["positive regulation of behavior",1]
["positive regulation of biological process",208]
["positive regulation of biosynthetic process",54]
["positive regulation of canonical Wnt signaling pathway",1]
["positive regulation of carotenoid biosynthetic process",1]
["positive regulation of catabolic process",18]
["positive regulation of catalytic activity",52]
["positive regulation of cation transmembrane transport",1]
["positive regulation of cell activation",1]
["positive regulation of cell adhesion",1]
["positive regulation of cell adhesion involved in single-species biofilm formation",1]
["positive regulation of cell communication",31]
["positive regulation of cell cycle",26]
["positive regulation of cell cycle checkpoint",2]
["positive regulation of cell cycle G1/S phase transition",2]
["positive regulation of cell cycle G2/M phase transition",4]
["positive regulation of cell cycle phase transition",9]
["positive regulation of cell cycle process",18]
["positive regulation of cell death",5]
["positive regulation of cell development",4]
["positive regulation of cell differentiation",9]
["positive regulation of cell division",7]
["positive regulation of cell fate commitment",1]
["positive regulation of cell growth",7]
["positive regulation of cell migration",3]
["positive regulation of cell motility",3]
["positive regulation of cell population proliferation",16]
["positive regulation of cell projection organization",2]
["positive regulation of cell size",1]
["positive regulation of cell-substrate adhesion",1]
["positive regulation of cellular amide metabolic process",3]
["positive regulation of cellular biosynthetic process",53]
["positive regulation of cellular catabolic process",17]
["positive regulation of cellular component biogenesis",11]
["positive regulation of cellular component movement",4]
["positive regulation of cellular component organization",30]
["positive regulation of cellular metabolic process",102]
["positive regulation of cellular process",160]
["positive regulation of cellular protein catabolic process",8]
["positive regulation of cellular protein localization",7]
["positive regulation of cellular protein metabolic process",44]
["positive regulation of cellular response to alcohol",5]
["positive regulation of cellular response to drug",2]
["positive regulation of cellular response to heat",1]
["positive regulation of cellular response to oxidative stress",1]
["positive regulation of chemotaxis",1]
["positive regulation of chlorophyll biosynthetic process",1]
["positive regulation of chromatin organization",6]
["positive regulation of chromosome organization",10]
["positive regulation of chromosome segregation",3]
["positive regulation of chromosome separation",3]
["positive regulation of circadian rhythm",1]
["positive regulation of clathrin-dependent endocytosis",1]
["positive regulation of collagen biosynthetic process",1]
["positive regulation of collagen metabolic process",1]
["positive regulation of conidium formation",1]
["positive regulation of conjugation",1]
["positive regulation of conjugation with cellular fusion",1]
["positive regulation of cyclin-dependent protein kinase activity",2]
["positive regulation of cyclin-dependent protein serine/threonine kinase activity",2]
["positive regulation of cysteine-type endopeptidase activity",1]
["positive regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["positive regulation of cytochrome-c oxidase activity",1]
["positive regulation of cytokine production",3]
["positive regulation of cytokinesis",1]
["positive regulation of cytokinin-activated signaling pathway",2]
["positive regulation of cytoplasmic transport",3]
["positive regulation of cytoskeleton organization",6]
["positive regulation of cytosolic calcium ion concentration",1]
["positive regulation of defense response",18]
["positive regulation of defense response to bacterium",3]
["positive regulation of defense response to oomycetes",1]
["positive regulation of defense response to virus by host",1]
["positive regulation of dendrite extension",1]
["positive regulation of dense core granule transport",1]
["positive regulation of deoxyribonuclease activity",1]
["positive regulation of dephosphorylation",1]
["positive regulation of developmental growth",4]
["positive regulation of developmental process",24]
["positive regulation of DNA biosynthetic process",5]
["positive regulation of DNA endoreduplication",2]
["positive regulation of DNA metabolic process",11]
["positive regulation of DNA recombination",1]
["positive regulation of DNA repair",2]
["positive regulation of DNA replication",2]
["positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["positive regulation of DNA-binding transcription factor activity",2]
["positive regulation of DNA-dependent DNA replication",2]
["positive regulation of DNA-directed DNA polymerase activity",4]
["positive regulation of DNA-templated transcription- elongation",3]
["positive regulation of DNA-templated transcription- initiation",2]
["positive regulation of early endosome to late endosome transport",2]
["positive regulation of electron transfer activity",1]
["positive regulation of embryonic development",1]
["positive regulation of endocytic recycling",1]
["positive regulation of endocytosis",4]
["positive regulation of endodeoxyribonuclease activity",1]
["positive regulation of endopeptidase activity",2]
["positive regulation of epidermal growth factor receptor signaling pathway",1]
["positive regulation of epidermal growth factor-activated receptor activity",1]
["positive regulation of epithelial to mesenchymal transition",1]
["positive regulation of ERBB signaling pathway",1]
["positive regulation of ERK1 and ERK2 cascade",1]
["positive regulation of establishment of protein localization",6]
["positive regulation of establishment of protein localization to mitochondrion",1]
["positive regulation of exocytosis",2]
["positive regulation of exosomal secretion",1]
["positive regulation of fertilization",1]
["positive regulation of fibroblast growth factor receptor signaling pathway",1]
["positive regulation of fibroblast migration",1]
["positive regulation of fibroblast proliferation",1]
["positive regulation of filamentous growth",1]
["positive regulation of filamentous growth of a population of unicellular organisms",1]
["positive regulation of flavonoid biosynthetic process",1]
["positive regulation of flower development",4]
["positive regulation of G0 to G1 transition",1]
["positive regulation of G1/S transition of mitotic cell cycle",2]
["positive regulation of G2/M transition of mitotic cell cycle",4]
["positive regulation of gene expression",49]
["positive regulation of gene expression- epigenetic",6]
["positive regulation of gibberellic acid mediated signaling pathway",3]
["positive regulation of glial cell differentiation",1]
["positive regulation of gliogenesis",1]
["positive regulation of glycoprotein biosynthetic process",1]
["positive regulation of glycoprotein metabolic process",1]
["positive regulation of growth",11]
["positive regulation of growth of unicellular organism as a thread of attached cells",1]
["positive regulation of GTPase activity",10]
["positive regulation of hematopoietic progenitor cell differentiation",1]
["positive regulation of hemopoiesis",1]
["positive regulation of histone acetylation",2]
["positive regulation of histone H3-K27 methylation",1]
["positive regulation of histone H3-K27 trimethylation",1]
["positive regulation of histone H3-K36 methylation",1]
["positive regulation of histone H3-K4 methylation",3]
["positive regulation of histone methylation",5]
["positive regulation of histone modification",6]
["positive regulation of hydrolase activity",21]
["positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["positive regulation of I-kappaB kinase/NF-kappaB signaling",1]
["positive regulation of immune effector process",2]
["positive regulation of immune response",18]
["positive regulation of immune system process",20]
["positive regulation of immunoglobulin mediated immune response",1]
["positive regulation of immunoglobulin production",1]
["positive regulation of innate immune response",15]
["positive regulation of insulin-like growth factor receptor signaling pathway",2]
["positive regulation of interleukin-1 production",1]
["positive regulation of interleukin-8 production",2]
["positive regulation of intracellular protein transport",5]
["positive regulation of intracellular signal transduction",12]
["positive regulation of intracellular transport",10]
["positive regulation of intrinsic apoptotic signaling pathway",1]
["positive regulation of invasive growth in response to glucose limitation",1]
["positive regulation of ion transmembrane transport",2]
["positive regulation of ion transmembrane transporter activity",2]
["positive regulation of ion transport",3]
["positive regulation of isomerase activity",1]
["positive regulation of isoprenoid metabolic process",2]
["positive regulation of isotype switching",1]
["positive regulation of kinase activity",18]
["positive regulation of leukocyte activation",1]
["positive regulation of leukocyte mediated immunity",1]
["positive regulation of lipase activity",3]
["positive regulation of lipid biosynthetic process",2]
["positive regulation of lipid catabolic process",1]
["positive regulation of lipid kinase activity",1]
["positive regulation of lipid localization",1]
["positive regulation of lipid metabolic process",4]
["positive regulation of lipid transport",1]
["positive regulation of lipophagy",2]
["positive regulation of locomotion",5]
["positive regulation of locomotion involved in locomotory behavior",1]
["positive regulation of long-day photoperiodism- flowering",3]
["positive regulation of lymphocyte activation",1]
["positive regulation of lymphocyte mediated immunity",1]
["positive regulation of lymphoid progenitor cell differentiation",1]
["positive regulation of Lys63-specific deubiquitinase activity",1]
["positive regulation of macroautophagy",2]
["positive regulation of macromolecule biosynthetic process",49]
["positive regulation of macromolecule metabolic process",99]
["positive regulation of macropinocytosis",1]
["positive regulation of MAP kinase activity",4]
["positive regulation of MAPK cascade",6]
["positive regulation of mating type switching",1]
["positive regulation of meiotic cell cycle",3]
["positive regulation of meiotic nuclear division",1]
["positive regulation of membrane permeability",1]
["positive regulation of membrane potential",1]
["positive regulation of metabolic process",115]
["positive regulation of metaphase/anaphase transition of cell cycle",3]
["positive regulation of microtubule nucleation",1]
["positive regulation of microtubule polymerization",1]
["positive regulation of microtubule polymerization or depolymerization",1]
["positive regulation of mitochondrial membrane permeability",1]
["positive regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["positive regulation of mitochondrial membrane potential",1]
["positive regulation of mitochondrial RNA catabolic process",1]
["positive regulation of mitochondrion organization",1]
["positive regulation of mitotic cell cycle",15]
["positive regulation of mitotic cell cycle phase transition",9]
["positive regulation of mitotic cell cycle spindle assembly checkpoint",2]
["positive regulation of mitotic cell cycle- embryonic",1]
["positive regulation of mitotic metaphase/anaphase transition",3]
["positive regulation of mitotic nuclear division",4]
["positive regulation of mitotic sister chromatid segregation",3]
["positive regulation of mitotic sister chromatid separation",3]
["positive regulation of molecular function",55]
["positive regulation of mRNA 3'-end processing",1]
["positive regulation of mRNA catabolic process",1]
["positive regulation of mRNA cleavage",1]
["positive regulation of mRNA metabolic process",3]
["positive regulation of mRNA polyadenylation",1]
["positive regulation of mRNA processing",2]
["positive regulation of mRNA splicing- via spliceosome",1]
["positive regulation of multi-organism process",10]
["positive regulation of multicellular organismal process",19]
["positive regulation of muscle cell differentiation",1]
["positive regulation of muscle contraction",1]
["positive regulation of myoblast fusion",1]
["positive regulation of myotube differentiation",1]
["positive regulation of NAD(P)H oxidase activity",1]
["positive regulation of nervous system development",3]
["positive regulation of neurogenesis",3]
["positive regulation of neuron apoptotic process",1]
["positive regulation of neuron death",1]
["positive regulation of neuron differentiation",2]
["positive regulation of neuron migration",1]
["positive regulation of neuron projection development",2]
["positive regulation of NF-kappaB transcription factor activity",1]
["positive regulation of NIK/NF-kappaB signaling",1]
["positive regulation of nitrogen compound metabolic process",89]
["positive regulation of nuclear division",5]
["positive regulation of nuclease activity",1]
["positive regulation of nucleic acid-templated transcription",40]
["positive regulation of nucleobase-containing compound metabolic process",56]
["positive regulation of nucleobase-containing compound transport",1]
["positive regulation of nucleocytoplasmic transport",3]
["positive regulation of nucleotide biosynthetic process",1]
["positive regulation of nucleotide metabolic process",1]
["positive regulation of oligodendrocyte differentiation",1]
["positive regulation of organ growth",1]
["positive regulation of organelle organization",21]
["positive regulation of oviposition",1]
["positive regulation of oxidative phosphorylation",1]
["positive regulation of oxidative stress-induced cell death",1]
["positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidative stress-induced neuron death",1]
["positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["positive regulation of oxidoreductase activity",3]
["positive regulation of pathway-restricted SMAD protein phosphorylation",1]
["positive regulation of peptidase activity",2]
["positive regulation of peptide secretion",1]
["positive regulation of peptidyl-lysine acetylation",2]
["positive regulation of peptidyl-serine phosphorylation",1]
["positive regulation of peptidyl-threonine phosphorylation",3]
["positive regulation of peptidyl-tyrosine phosphorylation",2]
["positive regulation of phosphate metabolic process",26]
["positive regulation of phosphatidylinositol 3-kinase activity",1]
["positive regulation of phospholipase A2 activity",1]
["positive regulation of phospholipase activity",3]
["positive regulation of phospholipase C activity",1]
["positive regulation of phospholipid metabolic process",1]
["positive regulation of phospholipid translocation",1]
["positive regulation of phospholipid transport",1]
["positive regulation of phosphorus metabolic process",26]
["positive regulation of phosphorylation",25]
["positive regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["positive regulation of photomorphogenesis",1]
["positive regulation of phytol biosynthetic process",1]
["positive regulation of pinocytosis",1]
["positive regulation of plant-type hypersensitive response",2]
["positive regulation of post-embryonic development",9]
["positive regulation of posttranscriptional gene silencing",1]
["positive regulation of pro-B cell differentiation",1]
["positive regulation of production of molecular mediator of immune response",1]
["positive regulation of production of siRNA involved in RNA interference",1]
["positive regulation of programmed cell death",5]
["positive regulation of proteasomal protein catabolic process",7]
["positive regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["positive regulation of protein acetylation",2]
["positive regulation of protein catabolic process",10]
["positive regulation of protein dephosphorylation",1]
["positive regulation of protein deubiquitination",1]
["positive regulation of protein exit from endoplasmic reticulum",2]
["positive regulation of protein export from nucleus",1]
["positive regulation of protein geranylgeranylation",2]
["positive regulation of protein glycosylation",1]
["positive regulation of protein glycosylation in Golgi",1]
["positive regulation of protein import",1]
["positive regulation of protein import into nucleus",1]
["positive regulation of protein K63-linked deubiquitination",1]
["positive regulation of protein kinase activity",17]
["positive regulation of protein localization to cell surface",2]
["positive regulation of protein localization to kinetochore",1]
["positive regulation of protein localization to nucleus",2]
["positive regulation of protein metabolic process",46]
["positive regulation of protein modification by small protein conjugation or removal",4]
["positive regulation of protein modification process",34]
["positive regulation of protein phosphorylation",23]
["positive regulation of protein polymerization",6]
["positive regulation of protein secretion",1]
["positive regulation of protein serine/threonine kinase activity",8]
["positive regulation of protein targeting to mitochondrion",1]
["positive regulation of protein transport",6]
["positive regulation of protein tyrosine kinase activity",1]
["positive regulation of protein ubiquitination",3]
["positive regulation of protein-containing complex assembly",9]
["positive regulation of proteolysis",9]
["positive regulation of proteolysis involved in cellular protein catabolic process",7]
["positive regulation of purine nucleotide biosynthetic process",1]
["positive regulation of purine nucleotide metabolic process",1]
["positive regulation of reactive oxygen species metabolic process",1]
["positive regulation of receptor internalization",3]
["positive regulation of receptor signaling pathway via JAK-STAT",1]
["positive regulation of receptor signaling pathway via STAT",1]
["positive regulation of receptor-mediated endocytosis",3]
["positive regulation of red or far-red light signaling pathway",1]
["positive regulation of reproductive process",14]
["positive regulation of response to alcohol",5]
["positive regulation of response to biotic stimulus",4]
["positive regulation of response to DNA damage stimulus",2]
["positive regulation of response to drug",2]
["positive regulation of response to external stimulus",5]
["positive regulation of response to oxidative stress",2]
["positive regulation of response to salt stress",3]
["positive regulation of response to stimulus",64]
["positive regulation of response to water deprivation",4]
["positive regulation of response to wounding",1]
["positive regulation of ribosome biogenesis",1]
["positive regulation of RNA biosynthetic process",40]
["positive regulation of RNA export from nucleus",1]
["positive regulation of RNA interference",1]
["positive regulation of RNA metabolic process",46]
["positive regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["positive regulation of RNA splicing",1]
["positive regulation of rRNA processing",1]
["positive regulation of salicylic acid mediated signaling pathway",2]
["positive regulation of secondary metabolite biosynthetic process",2]
["positive regulation of secretion",3]
["positive regulation of secretion by cell",3]
["positive regulation of seed germination",1]
["positive regulation of shade avoidance",1]
["positive regulation of short-day photoperiodism- flowering",1]
["positive regulation of signal transduction",30]
["positive regulation of signal transduction by p53 class mediator",1]
["positive regulation of signaling",31]
["positive regulation of signaling receptor activity",1]
["positive regulation of single-species biofilm formation",1]
["positive regulation of small molecule metabolic process",2]
["positive regulation of smooth muscle cell proliferation",1]
["positive regulation of smooth muscle contraction",1]
["positive regulation of smoothened signaling pathway",1]
["positive regulation of spindle checkpoint",2]
["positive regulation of sporulation",1]
["positive regulation of stem cell differentiation",2]
["positive regulation of sterigmatocystin biosynthetic process",1]
["positive regulation of stress-activated MAPK cascade",1]
["positive regulation of stress-activated protein kinase signaling cascade",1]
["positive regulation of striated muscle cell differentiation",1]
["positive regulation of supramolecular fiber organization",6]
["positive regulation of synaptic transmission",1]
["positive regulation of synaptic vesicle recycling",1]
["positive regulation of syncytium formation by plasma membrane fusion",1]
["positive regulation of syringal lignin biosynthetic process",1]
["positive regulation of systemic acquired resistance",2]
["positive regulation of telomerase activity",1]
["positive regulation of telomere maintenance",1]
["positive regulation of telomere maintenance via telomerase",1]
["positive regulation of telomere maintenance via telomere lengthening",1]
["positive regulation of tetrapyrrole biosynthetic process",1]
["positive regulation of tetrapyrrole metabolic process",1]
["positive regulation of TOR signaling",2]
["positive regulation of TORC1 signaling",1]
["positive regulation of transcription by RNA polymerase I",1]
["positive regulation of transcription by RNA polymerase II",13]
["positive regulation of transcription by transcription factor localization",1]
["positive regulation of transcription elongation from RNA polymerase II promoter",3]
["positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation",1]
["positive regulation of transcription from RNA polymerase II promoter in response to stress",1]
["positive regulation of transcription initiation from RNA polymerase II promoter",2]
["positive regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["positive regulation of transcription- DNA-templated",36]
["positive regulation of transferase activity",23]
["positive regulation of translation",3]
["positive regulation of translational initiation",1]
["positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",1]
["positive regulation of transmembrane transport",2]
["positive regulation of transport",18]
["positive regulation of transporter activity",2]
["positive regulation of triglyceride catabolic process",1]
["positive regulation of triglyceride metabolic process",1]
["positive regulation of tumor necrosis factor production",1]
["positive regulation of tumor necrosis factor superfamily cytokine production",1]
["positive regulation of tyrosine phosphorylation of STAT protein",1]
["positive regulation of ubiquitin-dependent protein catabolic process",5]
["positive regulation of ubiquitin-protein transferase activity",1]
["positive regulation of ubiquitin-specific protease activity",1]
["positive regulation of unidimensional cell growth",1]
["positive regulation of urease activity",2]
["positive regulation of vacuole fusion- non-autophagic",1]
["positive regulation of vacuole organization",2]
["positive regulation of vasculature development",1]
["positive regulation of vernalization response",1]
["positive regulation of viral genome replication",1]
["positive regulation of viral life cycle",1]
["positive regulation of viral process",3]
["positive regulation of vitamin E biosynthetic process",1]
["positive regulation of vitamin metabolic process",1]
["positive regulation of Wnt signaling pathway",1]
["positive regulation of wound healing",1]
["post-embryonic animal morphogenesis",2]
["post-embryonic animal organ development",2]
["post-embryonic animal organ morphogenesis",1]
["post-embryonic development",217]
["post-embryonic plant morphogenesis",33]
["post-embryonic plant organ development",36]
["post-embryonic plant organ morphogenesis",22]
["post-embryonic root development",27]
["post-embryonic root morphogenesis",13]
["post-Golgi vesicle-mediated transport",7]
["post-lysosomal vacuole",1]
["post-mRNA release spliceosomal complex",1]
["post-transcriptional gene silencing by RNA",13]
["post-translational protein modification",8]
["postreplication repair",9]
["postsynapse",3]
["postsynaptic membrane",3]
["posttranscriptional gene silencing",14]
["posttranscriptional regulation of gene expression",41]
["posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery",1]
["posttranslational protein targeting to endoplasmic reticulum membrane",3]
["posttranslational protein targeting to membrane- translocation",2]
["potassium channel activity",7]
["potassium ion antiporter activity",3]
["potassium ion binding",1]
["potassium ion homeostasis",4]
["potassium ion leak channel activity",1]
["potassium ion transmembrane transport",13]
["potassium ion transmembrane transporter activity",13]
["potassium ion transport",26]
["potassium ion-transporting ATPase complex",1]
["potassium:proton antiporter activity",3]
["pre-miRNA binding",1]
["pre-mRNA 3'-splice site binding",3]
["pre-mRNA binding",3]
["pre-mRNA cleavage required for polyadenylation",2]
["pre-replicative complex",3]
["pre-replicative complex assembly",3]
["pre-replicative complex assembly involved in cell cycle DNA replication",3]
["pre-replicative complex assembly involved in nuclear cell cycle DNA replication",3]
["preassembly of GPI anchor in ER membrane",1]
["precatalytic spliceosome",8]
["prefoldin complex",1]
["prenylated protein catabolic process",1]
["prenylation",2]
["prenylcysteine catabolic process",1]
["prenylcysteine metabolic process",1]
["prenylcysteine methylesterase activity",1]
["prenylcysteine oxidase activity",1]
["prenyltransferase activity",9]
["preprophase band",1]
["preprophase band assembly",1]
["preprotein binding",1]
["preribosome",20]
["preribosome- large subunit precursor",8]
["preribosome- small subunit precursor",1]
["prespliceosome",6]
["presynapse",4]
["presynaptic active zone",1]
["prevention of polyspermy",1]
["primary active transmembrane transporter activity",28]
["primary alcohol metabolic process",2]
["primary cell septum",1]
["primary cell septum disassembly",1]
["primary lysosome",1]
["primary meristem tissue development",3]
["primary metabolic process",1058]
["primary miRNA binding",1]
["primary miRNA processing",2]
["primary palate development",1]
["primary root development",4]
["primary shoot apical meristem specification",2]
["procambium histogenesis",1]
["process utilizing autophagic mechanism",21]
["procollagen-proline 4-dioxygenase activity",1]
["procollagen-proline dioxygenase activity",1]
["production of miRNAs involved in gene silencing by miRNA",6]
["production of molecular mediator of immune response",1]
["production of siRNA involved in chromatin silencing by small RNA",1]
["production of siRNA involved in RNA interference",5]
["production of small RNA involved in gene silencing by RNA",9]
["production of ta-siRNAs involved in RNA interference",2]
["profilin binding",1]
["programmed cell death",21]
["programmed cell death in response to reactive oxygen species",5]
["programmed cell death induced by symbiont",5]
["programmed cell death involved in cell development",3]
["progressive alteration of chromatin involved in cell aging",1]
["proline biosynthetic process",1]
["proline catabolic process",1]
["proline catabolic process to glutamate",1]
["proline metabolic process",3]
["proline-rich region binding",1]
["proline-tRNA ligase activity",1]
["prolyl-tRNA aminoacylation",1]
["promoter-specific chromatin binding",3]
["prospore membrane",1]
["prostaglandin biosynthetic process",1]
["prostaglandin metabolic process",2]
["prostanoid biosynthetic process",1]
["prostanoid metabolic process",2]
["prostate gland development",1]
["prostate gland growth",1]
["prosthetic group metabolic process",2]
["protease binding",5]
["proteasomal protein catabolic process",35]
["proteasome accessory complex",7]
["proteasome assembly",7]
["proteasome binding",2]
["proteasome complex",20]
["proteasome core complex",8]
["proteasome core complex- alpha-subunit complex",3]
["proteasome core complex- beta-subunit complex",5]
["proteasome regulatory particle",7]
["proteasome regulatory particle assembly",2]
["proteasome regulatory particle- base subcomplex",2]
["proteasome regulatory particle- lid subcomplex",5]
["proteasome-activating activity",1]
["proteasome-mediated ubiquitin-dependent protein catabolic process",31]
["protection from non-homologous end joining at telomere",2]
["protein acetylation",8]
["protein acetyltransferase complex",4]
["protein acylation",9]
["protein alkylation",24]
["protein arginylation",1]
["protein autophosphorylation",30]
["protein autosumoylation",1]
["protein autoubiquitination",4]
["protein binding",306]
["protein biotinylation",1]
["protein C-terminal methylesterase activity",1]
["protein C-terminus binding",1]
["protein catabolic process",78]
["protein complex oligomerization",25]
["protein deacetylase activity",1]
["protein deacetylation",3]
["protein deacylation",4]
["protein dealkylation",3]
["protein deglycosylation",3]
["protein delipidation",1]
["protein demethylation",3]
["protein denaturation",1]
["protein deneddylation",6]
["protein depalmitoylation",1]
["protein dephosphorylation",15]
["protein depolymerization",2]
["protein destabilization",2]
["protein deubiquitination",4]
["protein dimerization activity",46]
["protein disulfide isomerase activity",9]
["protein domain specific binding",26]
["protein exit from endoplasmic reticulum",3]
["protein export from nucleus",20]
["protein farnesylation",1]
["protein farnesyltransferase activity",1]
["protein farnesyltransferase complex",1]
["protein folding",36]
["protein folding chaperone",10]
["protein folding in endoplasmic reticulum",3]
["protein geranylgeranylation",1]
["protein geranylgeranyltransferase activity",1]
["protein glutathionylation",2]
["protein glycosylation",34]
["protein glycosylation in endoplasmic reticulum",1]
["protein heterodimerization activity",8]
["protein heterooligomerization",3]
["protein heterotetramerization",2]
["protein heterotrimerization",1]
["protein hexamerization",5]
["protein histidine kinase activity",3]
["protein histidine kinase binding",3]
["protein homodimerization activity",40]
["protein homooligomerization",15]
["protein homotetramerization",4]
["protein homotrimerization",1]
["protein hydroxylation",1]
["protein import",30]
["protein import into chloroplast stroma",6]
["protein import into mitochondrial intermembrane space",1]
["protein import into mitochondrial matrix",5]
["protein import into nucleus",14]
["protein import into peroxisome matrix",3]
["protein import into peroxisome matrix- docking",1]
["protein insertion into ER membrane",2]
["protein insertion into membrane",2]
["protein insertion into mitochondrial outer membrane",1]
["protein K48-linked ubiquitination",1]
["protein K63-linked ubiquitination",1]
["protein K69-linked ufmylation",1]
["protein kinase A binding",2]
["protein kinase A catalytic subunit binding",1]
["protein kinase A regulatory subunit binding",1]
["protein kinase activator activity",2]
["protein kinase activity",79]
["protein kinase binding",9]
["protein kinase complex",8]
["protein kinase regulator activity",6]
["protein lipidation",10]
["protein lipoylation",3]
["protein localization",113]
["protein localization to basolateral plasma membrane",1]
["protein localization to cell periphery",3]
["protein localization to chloroplast",9]
["protein localization to chromosome",1]
["protein localization to chromosome- centromeric region",1]
["protein localization to ciliary membrane",1]
["protein localization to cilium",2]
["protein localization to cytoskeleton",1]
["protein localization to endoplasmic reticulum",5]
["protein localization to Golgi apparatus",1]
["protein localization to Golgi membrane",1]
["protein localization to kinetochore",1]
["protein localization to lysosome",3]
["protein localization to meiotic spindle",1]
["protein localization to meiotic spindle midzone",1]
["protein localization to membrane",15]
["protein localization to microtubule cytoskeleton",1]
["protein localization to mitochondrion",8]
["protein localization to non-motile cilium",1]
["protein localization to nuclear envelope",2]
["protein localization to nuclear inner membrane",2]
["protein localization to nucleus",17]
["protein localization to organelle",62]
["protein localization to peroxisome",5]
["protein localization to phagophore assembly site",4]
["protein localization to plasma membrane",1]
["protein localization to trailing edge",1]
["protein localization to uropod",1]
["protein localization to vacuole",13]
["protein maturation",13]
["protein metabolic process",431]
["protein methylation",24]
["protein methylesterase activity",2]
["protein methyltransferase activity",14]
["protein modification by small protein conjugation",64]
["protein modification by small protein conjugation or removal",73]
["protein modification by small protein removal",10]
["protein modification process",291]
["protein monoubiquitination",3]
["protein myristoylation",1]
["protein N-acetylglucosaminyltransferase activity",1]
["protein N-linked glycosylation",23]
["protein N-linked glycosylation via asparagine",8]
["protein neddylation",2]
["protein O-linked fucosylation",1]
["protein O-linked glycosylation",6]
["protein O-linked glycosylation via hydroxyproline",4]
["protein peptidyl-prolyl isomerization",17]
["protein phosphatase 2A binding",3]
["protein phosphatase 2B binding",1]
["protein phosphatase binding",5]
["protein phosphatase inhibitor activity",3]
["protein phosphatase regulator activity",8]
["protein phosphatase type 2A complex",2]
["protein phosphorylated amino acid binding",2]
["protein phosphorylation",86]
["protein polymerization",4]
["protein polyubiquitination",18]
["protein polyufmylation",1]
["protein prenylation",2]
["protein prenyltransferase activity",2]
["protein processing",7]
["protein quality control for misfolded or incompletely synthesized proteins",6]
["protein refolding",1]
["protein repair",3]
["protein retention in ER lumen",1]
["protein secretion",1]
["protein self-association",18]
["protein serine/threonine kinase activator activity",1]
["protein serine/threonine kinase activity",63]
["protein serine/threonine phosphatase activity",5]
["protein serine/threonine phosphatase complex",2]
["protein serine/threonine phosphatase inhibitor activity",1]
["protein serine/threonine/tyrosine kinase activity",6]
["protein stabilization",4]
["protein storage vacuole",2]
["protein storage vacuole organization",2]
["protein sumoylation",5]
["protein targeting",39]
["protein targeting to chloroplast",9]
["protein targeting to ER",4]
["protein targeting to lysosome",3]
["protein targeting to membrane",7]
["protein targeting to mitochondrion",8]
["protein targeting to peroxisome",5]
["protein targeting to vacuole",9]
["protein tetramerization",8]
["protein to membrane docking",1]
["protein transmembrane import into intracellular organelle",9]
["protein transmembrane transport",20]
["protein transmembrane transporter activity",6]
["protein transport",97]
["protein transport by the Tat complex",1]
["protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",3]
["protein trimerization",3]
["protein tyrosine kinase activity",2]
["protein tyrosine phosphatase activity",5]
["protein tyrosine/serine/threonine phosphatase activity",1]
["protein tyrosine/threonine phosphatase activity",2]
["protein ubiquitination",55]
["protein ufmylation",1]
["protein unfolding",2]
["protein-arginine N-methyltransferase activity",6]
["protein-arginine N5-methyltransferase activity",1]
["protein-arginine omega-N asymmetric methyltransferase activity",4]
["protein-arginine omega-N monomethyltransferase activity",3]
["protein-containing complex",448]
["protein-containing complex assembly",121]
["protein-containing complex binding",42]
["protein-containing complex disassembly",14]
["protein-containing complex localization",26]
["protein-containing complex subunit organization",138]
["protein-cysteine S-palmitoyltransferase complex",2]
["protein-disulfide reductase (NAD(P)) activity",2]
["protein-disulfide reductase activity",5]
["protein-DNA complex",9]
["protein-DNA complex assembly",19]
["protein-DNA complex disassembly",2]
["protein-DNA complex subunit organization",24]
["protein-lysine N-methyltransferase activity",8]
["protein-macromolecule adaptor activity",3]
["protein-membrane adaptor activity",1]
["protein-tyrosine sulfotransferase activity",1]
["proteoglycan biosynthetic process",1]
["proteoglycan metabolic process",5]
["proteolysis",114]
["proteolysis involved in cellular protein catabolic process",65]
["protoderm histogenesis",2]
["proton motive force dependent protein transmembrane transporter activity",1]
["proton transmembrane transport",13]
["proton transmembrane transporter activity",12]
["proton-transporting ATP synthase complex",1]
["proton-transporting ATP synthase complex assembly",3]
["proton-transporting ATPase activity- rotational mechanism",3]
["proton-transporting two-sector ATPase complex",3]
["proton-transporting two-sector ATPase complex assembly",3]
["proton-transporting two-sector ATPase complex- catalytic domain",1]
["proton-transporting V-type ATPase complex",2]
["proton-transporting V-type ATPase- V1 domain",1]
["protoporphyrinogen IX biosynthetic process",1]
["protoporphyrinogen IX metabolic process",1]
["protoporphyrinogen oxidase activity",1]
["Prp19 complex",3]
["pseudopodium assembly",1]
["pseudopodium organization",1]
["pseudouridine synthase activity",9]
["pseudouridine synthesis",10]
["PSII associated light-harvesting complex II",1]
["PSII associated light-harvesting complex II catabolic process",3]
["pteridine-containing compound biosynthetic process",4]
["pteridine-containing compound metabolic process",5]
["pullulanase activity",1]
["purine nucleobase biosynthetic process",2]
["purine nucleobase catabolic process",4]
["purine nucleobase metabolic process",7]
["purine nucleobase salvage",1]
["purine nucleobase transmembrane transport",1]
["purine nucleobase transmembrane transporter activity",1]
["purine nucleobase transport",1]
["purine nucleosidase activity",1]
["purine nucleoside binding",15]
["purine nucleoside biosynthetic process",4]
["purine nucleoside bisphosphate biosynthetic process",5]
["purine nucleoside bisphosphate catabolic process",1]
["purine nucleoside bisphosphate metabolic process",10]
["purine nucleoside diphosphate biosynthetic process",1]
["purine nucleoside diphosphate metabolic process",11]
["purine nucleoside metabolic process",7]
["purine nucleoside monophosphate biosynthetic process",14]
["purine nucleoside monophosphate metabolic process",22]
["purine nucleoside triphosphate biosynthetic process",13]
["purine nucleoside triphosphate metabolic process",21]
["purine nucleotide binding",56]
["purine nucleotide biosynthetic process",23]
["purine nucleotide catabolic process",1]
["purine nucleotide metabolic process",36]
["purine nucleotide transmembrane transporter activity",8]
["purine nucleotide transport",9]
["purine nucleotide-sugar transmembrane transport",5]
["purine nucleotide-sugar transmembrane transporter activity",3]
["purine ribonucleoside binding",15]
["purine ribonucleoside biosynthetic process",4]
["purine ribonucleoside bisphosphate biosynthetic process",1]
["purine ribonucleoside bisphosphate metabolic process",2]
["purine ribonucleoside diphosphate biosynthetic process",1]
["purine ribonucleoside diphosphate metabolic process",11]
["purine ribonucleoside metabolic process",7]
["purine ribonucleoside monophosphate biosynthetic process",14]
["purine ribonucleoside monophosphate metabolic process",22]
["purine ribonucleoside triphosphate binding",53]
["purine ribonucleoside triphosphate biosynthetic process",13]
["purine ribonucleoside triphosphate metabolic process",21]
["purine ribonucleotide binding",56]
["purine ribonucleotide biosynthetic process",22]
["purine ribonucleotide catabolic process",1]
["purine ribonucleotide metabolic process",35]
["purine ribonucleotide transmembrane transporter activity",8]
["purine ribonucleotide transport",9]
["purine-containing compound biosynthetic process",25]
["purine-containing compound catabolic process",5]
["purine-containing compound metabolic process",44]
["purine-containing compound salvage",2]
["purine-containing compound transmembrane transport",4]
["putrescine binding",1]
["putrescine biosynthetic process",3]
["putrescine biosynthetic process from arginine",1]
["putrescine biosynthetic process from arginine- using agmatinase",1]
["putrescine metabolic process",3]
["putrescine transport",1]
["Pwp2p-containing subcomplex of 90S preribosome",2]
["pyridine nucleotide biosynthetic process",15]
["pyridine nucleotide metabolic process",24]
["pyridine nucleotide salvage",1]
["pyridine-containing compound biosynthetic process",17]
["pyridine-containing compound catabolic process",1]
["pyridine-containing compound metabolic process",26]
["pyridoxal 5'-phosphate salvage",2]
["pyridoxal biosynthetic process",1]
["pyridoxal kinase activity",1]
["pyridoxal metabolic process",1]
["pyridoxal phosphate binding",6]
["pyridoxal phosphate biosynthetic process",3]
["pyridoxal phosphate metabolic process",3]
["pyridoxamine-phosphate oxidase activity",1]
["pyridoxine biosynthetic process",1]
["pyridoxine metabolic process",1]
["pyridoxine:NADP 4-dehydrogenase activity",1]
["pyrimidine deoxyribonucleoside metabolic process",1]
["pyrimidine deoxyribonucleotide catabolic process",1]
["pyrimidine deoxyribonucleotide metabolic process",1]
["pyrimidine dimer repair",3]
["pyrimidine dimer repair by nucleotide-excision repair",1]
["pyrimidine nucleobase biosynthetic process",2]
["pyrimidine nucleobase catabolic process",3]
["pyrimidine nucleobase metabolic process",9]
["pyrimidine nucleobase salvage",1]
["pyrimidine nucleoside biosynthetic process",4]
["pyrimidine nucleoside catabolic process",1]
["pyrimidine nucleoside metabolic process",7]
["pyrimidine nucleoside monophosphate biosynthetic process",3]
["pyrimidine nucleoside monophosphate metabolic process",3]
["pyrimidine nucleoside salvage",4]
["pyrimidine nucleotide biosynthetic process",7]
["pyrimidine nucleotide catabolic process",1]
["pyrimidine nucleotide metabolic process",10]
["pyrimidine nucleotide-sugar transmembrane transport",6]
["pyrimidine nucleotide-sugar transmembrane transporter activity",6]
["pyrimidine ribonucleoside biosynthetic process",3]
["pyrimidine ribonucleoside catabolic process",1]
["pyrimidine ribonucleoside metabolic process",5]
["pyrimidine ribonucleoside monophosphate biosynthetic process",3]
["pyrimidine ribonucleoside monophosphate metabolic process",3]
["pyrimidine ribonucleotide biosynthetic process",6]
["pyrimidine ribonucleotide metabolic process",6]
["pyrimidine-containing compound biosynthetic process",15]
["pyrimidine-containing compound catabolic process",5]
["pyrimidine-containing compound metabolic process",22]
["pyrimidine-containing compound salvage",7]
["pyrophosphatase activity",151]
["pyruvate biosynthetic process",11]
["pyruvate dehydrogenase (acetyl-transferring) kinase activity",1]
["pyruvate family amino acid catabolic process",1]
["pyruvate family amino acid metabolic process",2]
["pyruvate kinase activity",3]
["pyruvate metabolic process",18]
["pyruvate transmembrane transport",2]
["pyruvate transmembrane transporter activity",2]
["pyruvate transport",2]
["quaternary ammonium group transmembrane transporter activity",1]
["quaternary ammonium group transport",1]
["queuine tRNA-ribosyltransferase activity",1]
["queuosine biosynthetic process",1]
["queuosine metabolic process",1]
["quiescent center organization",1]
["quinolinate catabolic process",1]
["quinolinate metabolic process",1]
["quinone binding",1]
["quinone biosynthetic process",4]
["quinone metabolic process",4]
["Rab GDP-dissociation inhibitor activity",1]
["Rab geranylgeranyltransferase activity",1]
["Rab protein signal transduction",1]
["Rab-protein geranylgeranyltransferase complex",2]
["racemase activity- acting on amino acids and derivatives",1]
["racemase and epimerase activity",9]
["racemase and epimerase activity- acting on amino acids and derivatives",2]
["racemase and epimerase activity- acting on carbohydrates and derivatives",3]
["racemase and epimerase activity- acting on hydroxy acids and derivatives",2]
["Rad51B-Rad51C-Rad51D-XRCC2 complex",1]
["radial axis specification",2]
["radial pattern formation",4]
["radial spoke",1]
["raffinose family oligosaccharide biosynthetic process",1]
["Ran protein signal transduction",1]
["Ras protein signal transduction",3]
["rDNA binding",1]
["rDNA protrusion",1]
["reactive nitrogen species metabolic process",2]
["reactive oxygen species biosynthetic process",6]
["reactive oxygen species metabolic process",22]
["receptor internalization",1]
["receptor internalization involved in canonical Wnt signaling pathway",1]
["receptor localization to non-motile cilium",1]
["receptor metabolic process",1]
["receptor serine/threonine kinase binding",2]
["receptor-mediated endocytosis",4]
["reciprocal meiotic recombination",15]
["recognition of pollen",2]
["recombinational repair",16]
["recycling endosome",3]
["recycling endosome membrane",1]
["red or far-red light signaling pathway",4]
["red- far-red light phototransduction",2]
["reductive pentose-phosphate cycle",4]
["regeneration",1]
["regionalization",27]
["regulated exocytosis",5]
["regulation of abscisic acid-activated signaling pathway",13]
["regulation of actin cytoskeleton organization",9]
["regulation of actin filament depolymerization",1]
["regulation of actin filament length",6]
["regulation of actin filament organization",6]
["regulation of actin filament polymerization",6]
["regulation of actin filament-based process",9]
["regulation of actin nucleation",2]
["regulation of actin polymerization or depolymerization",6]
["regulation of activin receptor signaling pathway",1]
["regulation of actomyosin contractile ring contraction",1]
["regulation of actomyosin structure organization",2]
["regulation of adaptive immune response",1]
["regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains",1]
["regulation of adaxial/abaxial pattern formation",1]
["regulation of adenylate cyclase activity",2]
["regulation of aerobic respiration",1]
["regulation of alcohol biosynthetic process",4]
["regulation of alternative mRNA splicing- via spliceosome",4]
["regulation of anatomical structure morphogenesis",27]
["regulation of anatomical structure size",19]
["regulation of androgen receptor signaling pathway",1]
["regulation of angiogenesis",2]
["regulation of animal organ morphogenesis",2]
["regulation of anion channel activity",1]
["regulation of anion transmembrane transport",1]
["regulation of anion transport",3]
["regulation of anoikis",1]
["regulation of anthocyanin biosynthetic process",1]
["regulation of anthocyanin metabolic process",4]
["regulation of antifungal innate immune response",1]
["regulation of antisense RNA transcription",1]
["regulation of apoptotic process",16]
["regulation of apoptotic process involved in development",1]
["regulation of apoptotic signaling pathway",3]
["regulation of arginine biosynthetic process",1]
["regulation of arginine biosynthetic process via ornithine",1]
["regulation of arginine metabolic process",1]
["regulation of asexual reproduction",1]
["regulation of asexual sporulation",1]
["regulation of ATP biosynthetic process",3]
["regulation of ATP metabolic process",3]
["regulation of ATPase activity",3]
["regulation of attachment of spindle microtubules to kinetochore",1]
["regulation of autophagosome assembly",2]
["regulation of autophagy",14]
["regulation of autophagy of mitochondrion",1]
["regulation of auxin biosynthetic process",1]
["regulation of auxin mediated signaling pathway",9]
["regulation of auxin metabolic process",2]
["regulation of auxin polar transport",3]
["regulation of B cell activation",1]
["regulation of B cell mediated immunity",1]
["regulation of behavior",2]
["regulation of beta-glucan biosynthetic process",2]
["regulation of beta-glucan metabolic process",2]
["regulation of binding",2]
["regulation of biological process",618]
["regulation of biological process involved in symbiotic interaction",5]
["regulation of biological quality",180]
["regulation of biosynthetic process",208]
["regulation of blood circulation",1]
["regulation of blood vessel endothelial cell migration",1]
["regulation of BMP signaling pathway",1]
["regulation of body fluid levels",4]
["regulation of bone development",1]
["regulation of brassinosteroid mediated signaling pathway",3]
["regulation of calcium ion transmembrane transport",1]
["regulation of calcium ion transport",2]
["regulation of calcium ion transport into cytosol",1]
["regulation of canonical Wnt signaling pathway",5]
["regulation of carbohydrate biosynthetic process",7]
["regulation of carbohydrate catabolic process",2]
["regulation of carbohydrate metabolic process",10]
["regulation of carbon utilization",1]
["regulation of cardiac muscle cell apoptotic process",1]
["regulation of cardiac muscle cell proliferation",1]
["regulation of cardiac muscle contraction",1]
["regulation of cardiac muscle contraction by calcium ion signaling",1]
["regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion",1]
["regulation of cardiac muscle tissue development",1]
["regulation of cardiac muscle tissue growth",1]
["regulation of catabolic process",37]
["regulation of catalytic activity",85]
["regulation of cation transmembrane transport",3]
["regulation of cell activation",2]
["regulation of cell adhesion",1]
["regulation of cell adhesion involved in single-species biofilm formation",1]
["regulation of cell aging",1]
["regulation of cell communication",91]
["regulation of cell cycle",74]
["regulation of cell cycle checkpoint",3]
["regulation of cell cycle G1/S phase transition",4]
["regulation of cell cycle G2/M phase transition",7]
["regulation of cell cycle phase transition",23]
["regulation of cell cycle process",43]
["regulation of cell death",30]
["regulation of cell development",9]
["regulation of cell diameter",1]
["regulation of cell differentiation",20]
["regulation of cell division",15]
["regulation of cell fate commitment",1]
["regulation of cell growth",15]
["regulation of cell migration",5]
["regulation of cell migration involved in sprouting angiogenesis",1]
["regulation of cell morphogenesis",9]
["regulation of cell morphogenesis involved in differentiation",1]
["regulation of cell motility",6]
["regulation of cell population proliferation",25]
["regulation of cell projection assembly",4]
["regulation of cell projection organization",8]
["regulation of cell septum assembly",1]
["regulation of cell shape",4]
["regulation of cell size",9]
["regulation of cell wall macromolecule metabolic process",2]
["regulation of cell wall organization or biogenesis",3]
["regulation of cell-substrate adhesion",1]
["regulation of cellular amide metabolic process",19]
["regulation of cellular amine metabolic process",4]
["regulation of cellular amino acid biosynthetic process",1]
["regulation of cellular amino acid metabolic process",4]
["regulation of cellular biosynthetic process",200]
["regulation of cellular carbohydrate metabolic process",6]
["regulation of cellular catabolic process",35]
["regulation of cellular component biogenesis",34]
["regulation of cellular component movement",8]
["regulation of cellular component organization",109]
["regulation of cellular component size",19]
["regulation of cellular ketone metabolic process",8]
["regulation of cellular localization",21]
["regulation of cellular macromolecule biosynthetic process",185]
["regulation of cellular metabolic process",302]
["regulation of cellular pH",6]
["regulation of cellular process",537]
["regulation of cellular protein catabolic process",9]
["regulation of cellular protein localization",12]
["regulation of cellular protein metabolic process",86]
["regulation of cellular respiration",1]
["regulation of cellular response to alcohol",13]
["regulation of cellular response to drug",4]
["regulation of cellular response to growth factor stimulus",2]
["regulation of cellular response to heat",3]
["regulation of cellular response to insulin stimulus",1]
["regulation of cellular response to oxidative stress",1]
["regulation of cellular response to stress",23]
["regulation of cellular response to transforming growth factor beta stimulus",1]
["regulation of cellular senescence",1]
["regulation of cellulose biosynthetic process",2]
["regulation of centromere complex assembly",1]
["regulation of chemotaxis",1]
["regulation of chlorophyll biosynthetic process",3]
["regulation of chlorophyll metabolic process",3]
["regulation of cholesterol biosynthetic process",2]
["regulation of cholesterol metabolic process",2]
["regulation of chromatin assembly",1]
["regulation of chromatin assembly or disassembly",1]
["regulation of chromatin organization",21]
["regulation of chromatin silencing",10]
["regulation of chromatin silencing at telomere",2]
["regulation of chromosome organization",37]
["regulation of chromosome segregation",13]
["regulation of chromosome separation",12]
["regulation of cilium assembly",1]
["regulation of cilium beat frequency",1]
["regulation of cilium movement",1]
["regulation of circadian rhythm",6]
["regulation of clathrin-dependent endocytosis",1]
["regulation of collagen biosynthetic process",1]
["regulation of collagen metabolic process",1]
["regulation of conidium formation",1]
["regulation of conjugation",1]
["regulation of conjugation with cellular fusion",1]
["regulation of cyclase activity",3]
["regulation of cyclin-dependent protein kinase activity",4]
["regulation of cyclin-dependent protein serine/threonine kinase activity",4]
["regulation of cysteine-type endopeptidase activity",2]
["regulation of cysteine-type endopeptidase activity involved in apoptotic process",1]
["regulation of cytochrome-c oxidase activity",1]
["regulation of cytokine production",5]
["regulation of cytokine-mediated signaling pathway",1]
["regulation of cytokinesis",5]
["regulation of cytokinetic process",1]
["regulation of cytokinin dehydrogenase activity",1]
["regulation of cytokinin-activated signaling pathway",4]
["regulation of cytoplasmic mRNA processing body assembly",1]
["regulation of cytoplasmic translation",3]
["regulation of cytoplasmic translational elongation",3]
["regulation of cytoplasmic transport",3]
["regulation of cytoskeleton organization",10]
["regulation of cytosolic calcium ion concentration",2]
["regulation of defense response",44]
["regulation of defense response to bacterium",7]
["regulation of defense response to fungus",3]
["regulation of defense response to oomycetes",1]
["regulation of defense response to virus",2]
["regulation of defense response to virus by host",2]
["regulation of dendrite development",2]
["regulation of dendrite extension",1]
["regulation of dendritic spine development",1]
["regulation of dense core granule transport",1]
["regulation of deoxyribonuclease activity",1]
["regulation of dephosphorylation",9]
["regulation of development- heterochronic",8]
["regulation of developmental growth",23]
["regulation of developmental process",119]
["regulation of division septum assembly",1]
["regulation of DNA binding",2]
["regulation of DNA biosynthetic process",8]
["regulation of DNA endoreduplication",9]
["regulation of DNA metabolic process",46]
["regulation of DNA methylation",5]
["regulation of DNA methylation-dependent heterochromatin assembly",1]
["regulation of DNA recombination",8]
["regulation of DNA recombination at centromere",2]
["regulation of DNA repair",9]
["regulation of DNA replication",22]
["regulation of DNA topoisomerase (ATP-hydrolyzing) activity",1]
["regulation of DNA-binding transcription factor activity",2]
["regulation of DNA-dependent DNA replication",20]
["regulation of DNA-dependent DNA replication initiation",4]
["regulation of DNA-directed DNA polymerase activity",4]
["regulation of DNA-templated transcription in response to stress",1]
["regulation of DNA-templated transcription- elongation",5]
["regulation of DNA-templated transcription- initiation",5]
["regulation of DNA-templated transcription- termination",2]
["regulation of double-strand break repair",3]
["regulation of double-strand break repair via homologous recombination",2]
["regulation of early endosome to late endosome transport",2]
["regulation of electron transfer activity",1]
["regulation of embryo sac egg cell differentiation",1]
["regulation of embryonic development",3]
["regulation of endocytic recycling",1]
["regulation of endocytosis",6]
["regulation of endodeoxyribonuclease activity",1]
["regulation of endopeptidase activity",4]
["regulation of endoplasmic reticulum unfolded protein response",1]
["regulation of endosome organization",1]
["regulation of endosome size",1]
["regulation of endosperm development",1]
["regulation of endothelial cell migration",1]
["regulation of entry of bacterium into host cell",1]
["regulation of epidermal cell differentiation",2]
["regulation of epidermal cell division",1]
["regulation of epidermal growth factor receptor signaling pathway",2]
["regulation of epidermal growth factor-activated receptor activity",1]
["regulation of epidermis development",2]
["regulation of epithelial cell differentiation",2]
["regulation of epithelial cell migration",1]
["regulation of epithelial cell proliferation",1]
["regulation of epithelial to mesenchymal transition",1]
["regulation of ER to Golgi vesicle-mediated transport",1]
["regulation of ER-associated ubiquitin-dependent protein catabolic process",2]
["regulation of ERAD pathway",2]
["regulation of ERBB signaling pathway",2]
["regulation of ERK1 and ERK2 cascade",3]
["regulation of establishment of cell polarity",1]
["regulation of establishment of planar polarity",1]
["regulation of establishment of protein localization",12]
["regulation of establishment of protein localization to mitochondrion",1]
["regulation of establishment or maintenance of cell polarity",1]
["regulation of ethylene biosynthetic process",3]
["regulation of ethylene-activated signaling pathway",6]
["regulation of exit from mitosis",1]
["regulation of exocytosis",2]
["regulation of exosomal secretion",1]
["regulation of extrinsic apoptotic signaling pathway",1]
["regulation of fat cell differentiation",1]
["regulation of fatty acid biosynthetic process",1]
["regulation of fatty acid metabolic process",1]
["regulation of fatty acid transport",1]
["regulation of feeding behavior",1]
["regulation of female receptivity",1]
["regulation of fertilization",2]
["regulation of fibroblast growth factor receptor signaling pathway",1]
["regulation of fibroblast migration",1]
["regulation of fibroblast proliferation",1]
["regulation of filamentous growth",1]
["regulation of filamentous growth of a population of unicellular organisms",1]
["regulation of flavonoid biosynthetic process",3]
["regulation of floral organ abscission",1]
["regulation of flower development",21]
["regulation of G protein-coupled receptor signaling pathway",1]
["regulation of G0 to G1 transition",1]
["regulation of G1/S transition of mitotic cell cycle",4]
["regulation of G2/M transition of mitotic cell cycle",6]
["regulation of gene expression",225]
["regulation of gene expression by genetic imprinting",4]
["regulation of gene expression- epigenetic",34]
["regulation of gene silencing",20]
["regulation of gene silencing by miRNA",3]
["regulation of gene silencing by RNA",5]
["regulation of generation of precursor metabolites and energy",11]
["regulation of genetic imprinting",2]
["regulation of gibberellic acid mediated signaling pathway",4]
["regulation of glial cell differentiation",1]
["regulation of gliogenesis",1]
["regulation of glucan biosynthetic process",3]
["regulation of gluconeogenesis",1]
["regulation of glucose metabolic process",1]
["regulation of glutamine family amino acid metabolic process",1]
["regulation of glycolytic process",2]
["regulation of glycoprotein biosynthetic process",1]
["regulation of glycoprotein metabolic process",1]
["regulation of growth",42]
["regulation of growth of unicellular organism as a thread of attached cells",1]
["regulation of growth rate",2]
["regulation of GTPase activity",13]
["regulation of heart contraction",1]
["regulation of heart growth",1]
["regulation of hematopoietic progenitor cell differentiation",1]
["regulation of hemopoiesis",3]
["regulation of heterochromatin assembly",1]
["regulation of heterochromatin island assembly",1]
["regulation of hippo signaling",1]
["regulation of histone acetylation",5]
["regulation of histone H3-K27 methylation",1]
["regulation of histone H3-K27 trimethylation",1]
["regulation of histone H3-K36 methylation",3]
["regulation of histone H3-K36 trimethylation",2]
["regulation of histone H3-K4 methylation",3]
["regulation of histone H3-K9 methylation",1]
["regulation of histone H4 acetylation",1]
["regulation of histone methylation",9]
["regulation of histone modification",12]
["regulation of hormone biosynthetic process",3]
["regulation of hormone levels",47]
["regulation of hormone metabolic process",7]
["regulation of hydrogen peroxide metabolic process",1]
["regulation of hydrolase activity",35]
["regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity",1]
["regulation of I-kappaB kinase/NF-kappaB signaling",2]
["regulation of immune effector process",4]
["regulation of immune response",28]
["regulation of immune system process",31]
["regulation of immunoglobulin mediated immune response",1]
["regulation of immunoglobulin production",1]
["regulation of indoleacetic acid biosynthetic process via tryptophan",1]
["regulation of inflammatory response",1]
["regulation of innate immune response",22]
["regulation of inositol phosphate biosynthetic process",1]
["regulation of inositol trisphosphate biosynthetic process",1]
["regulation of insulin receptor signaling pathway",1]
["regulation of insulin-like growth factor receptor signaling pathway",2]
["regulation of interleukin-1 production",1]
["regulation of interleukin-8 production",4]
["regulation of intracellular estrogen receptor signaling pathway",1]
["regulation of intracellular pH",6]
["regulation of intracellular protein transport",10]
["regulation of intracellular signal transduction",31]
["regulation of intracellular steroid hormone receptor signaling pathway",2]
["regulation of intracellular transport",16]
["regulation of intralumenal vesicle formation",1]
["regulation of intrinsic apoptotic signaling pathway",2]
["regulation of invasive growth in response to glucose limitation",1]
["regulation of ion transmembrane transport",4]
["regulation of ion transmembrane transporter activity",3]
["regulation of ion transport",8]
["regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter",2]
["regulation of iron ion transport",2]
["regulation of iron-sulfur cluster assembly",1]
["regulation of isomerase activity",1]
["regulation of isopentenyl diphosphate biosynthetic process- methylerythritol 4-phosphate pathway",1]
["regulation of isoprenoid metabolic process",3]
["regulation of isotype switching",1]
["regulation of jasmonic acid mediated signaling pathway",4]
["regulation of JNK cascade",1]
["regulation of kinase activity",26]
["regulation of kinetochore assembly",1]
["regulation of L-ascorbic acid biosynthetic process",1]
["regulation of lateral root development",1]
["regulation of leaf development",7]
["regulation of leaf morphogenesis",1]
["regulation of leaf senescence",1]
["regulation of leukocyte activation",2]
["regulation of leukocyte differentiation",1]
["regulation of leukocyte mediated immunity",1]
["regulation of leukocyte proliferation",1]
["regulation of lignin biosynthetic process",2]
["regulation of lipase activity",3]
["regulation of lipid biosynthetic process",6]
["regulation of lipid catabolic process",1]
["regulation of lipid kinase activity",1]
["regulation of lipid localization",3]
["regulation of lipid metabolic process",10]
["regulation of lipid storage",1]
["regulation of lipid transport",2]
["regulation of lipophagy",2]
["regulation of localization",55]
["regulation of locomotion",8]
["regulation of locomotion involved in locomotory behavior",1]
["regulation of long-day photoperiodism- flowering",4]
["regulation of lyase activity",2]
["regulation of lymphocyte activation",1]
["regulation of lymphocyte mediated immunity",1]
["regulation of lymphoid progenitor cell differentiation",1]
["regulation of lysosomal lumen pH",1]
["regulation of macroautophagy",6]
["regulation of macromolecule biosynthetic process",190]
["regulation of macromolecule metabolic process",313]
["regulation of macropinocytosis",1]
["regulation of MAP kinase activity",7]
["regulation of MAPK cascade",11]
["regulation of mast cell activation",1]
["regulation of mast cell activation involved in immune response",1]
["regulation of mast cell proliferation",1]
["regulation of mating type switching",1]
["regulation of megakaryocyte differentiation",1]
["regulation of meiosis I",2]
["regulation of meiotic cell cycle",9]
["regulation of meiotic cell cycle phase transition",1]
["regulation of meiotic chromosome separation",1]
["regulation of meiotic nuclear division",6]
["regulation of membrane lipid distribution",2]
["regulation of membrane permeability",2]
["regulation of membrane potential",12]
["regulation of meristem development",23]
["regulation of meristem growth",12]
["regulation of meristem structural organization",4]
["regulation of mesoderm development",1]
["regulation of metabolic process",361]
["regulation of metal ion transport",4]
["regulation of metaphase/anaphase transition of cell cycle",12]
["regulation of metaphase/anaphase transition of meiotic cell cycle",1]
["regulation of MHC class II biosynthetic process",2]
["regulation of microtubule cytoskeleton organization",1]
["regulation of microtubule motor activity",1]
["regulation of microtubule nucleation",1]
["regulation of microtubule polymerization",1]
["regulation of microtubule polymerization or depolymerization",1]
["regulation of microtubule-based movement",1]
["regulation of microtubule-based process",3]
["regulation of mitochondrial membrane permeability",2]
["regulation of mitochondrial membrane permeability involved in apoptotic process",1]
["regulation of mitochondrial membrane potential",2]
["regulation of mitochondrial RNA catabolic process",1]
["regulation of mitochondrion organization",1]
["regulation of mitotic cell cycle",40]
["regulation of mitotic cell cycle DNA replication",1]
["regulation of mitotic cell cycle phase transition",22]
["regulation of mitotic cell cycle spindle assembly checkpoint",3]
["regulation of mitotic cell cycle- embryonic",1]
["regulation of mitotic cytokinesis",1]
["regulation of mitotic cytokinetic process",1]
["regulation of mitotic metaphase/anaphase transition",12]
["regulation of mitotic nuclear division",15]
["regulation of mitotic sister chromatid segregation",12]
["regulation of mitotic sister chromatid separation",12]
["regulation of mitotic spindle checkpoint",3]
["regulation of molecular function",93]
["regulation of morphogenesis of a branching structure",5]
["regulation of morphogenesis of an epithelium",1]
["regulation of mRNA 3'-end processing",1]
["regulation of mRNA catabolic process",7]
["regulation of mRNA cleavage",1]
["regulation of mRNA export from nucleus",1]
["regulation of mRNA metabolic process",14]
["regulation of mRNA polyadenylation",1]
["regulation of mRNA processing",8]
["regulation of mRNA splicing- via spliceosome",6]
["regulation of mRNA stability",6]
["regulation of multi-organism process",25]
["regulation of multicellular organism growth",1]
["regulation of multicellular organismal development",88]
["regulation of multicellular organismal process",96]
["regulation of muscle cell apoptotic process",1]
["regulation of muscle cell differentiation",2]
["regulation of muscle contraction",2]
["regulation of muscle organ development",1]
["regulation of muscle system process",2]
["regulation of muscle tissue development",1]
["regulation of myelination",1]
["regulation of myeloid cell differentiation",2]
["regulation of myeloid leukocyte differentiation",1]
["regulation of myoblast fusion",1]
["regulation of myotube differentiation",1]
["regulation of NAD(P)H oxidase activity",1]
["regulation of nervous system development",6]
["regulation of nervous system process",1]
["regulation of neurogenesis",5]
["regulation of neuromuscular junction development",1]
["regulation of neuron apoptotic process",2]
["regulation of neuron death",2]
["regulation of neuron differentiation",4]
["regulation of neuron migration",1]
["regulation of neuron projection development",4]
["regulation of neuronal synaptic plasticity",1]
["regulation of neurotransmitter levels",11]
["regulation of neurotransmitter secretion",1]
["regulation of neurotransmitter transport",1]
["regulation of NIK/NF-kappaB signaling",1]
["regulation of nitrate assimilation",1]
["regulation of nitrogen compound metabolic process",267]
["regulation of nitrogen cycle metabolic process",1]
["regulation of nitrogen utilization",1]
["regulation of nodal signaling pathway",1]
["regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry",1]
["regulation of nodal signaling pathway involved in determination of left/right asymmetry",1]
["regulation of non-canonical Wnt signaling pathway",1]
["regulation of Notch signaling pathway",1]
["regulation of nuclear cell cycle DNA replication",1]
["regulation of nuclear division",21]
["regulation of nuclear-transcribed mRNA catabolic process- deadenylation-dependent decay",1]
["regulation of nuclear-transcribed mRNA poly(A) tail shortening",1]
["regulation of nuclease activity",1]
["regulation of nucleic acid-templated transcription",142]
["regulation of nucleobase-containing compound metabolic process",195]
["regulation of nucleobase-containing compound transport",2]
["regulation of nucleocytoplasmic transport",7]
["regulation of nucleotide biosynthetic process",3]
["regulation of nucleotide catabolic process",2]
["regulation of nucleotide metabolic process",3]
["regulation of nucleus size",1]
["regulation of nurse cell apoptotic process",1]
["regulation of odontogenesis",1]
["regulation of odontogenesis of dentin-containing tooth",1]
["regulation of olefin biosynthetic process",3]
["regulation of olefin metabolic process",3]
["regulation of oligodendrocyte differentiation",1]
["regulation of oogenesis",1]
["regulation of organ growth",2]
["regulation of organelle assembly",7]
["regulation of organelle organization",72]
["regulation of organic acid transport",1]
["regulation of ornithine metabolic process",1]
["regulation of osteoclast development",1]
["regulation of osteoclast differentiation",1]
["regulation of oviposition",1]
["regulation of oxidative phosphorylation",1]
["regulation of oxidative stress-induced cell death",1]
["regulation of oxidative stress-induced intrinsic apoptotic signaling pathway",1]
["regulation of oxidative stress-induced neuron death",1]
["regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway",1]
["regulation of oxidoreductase activity",4]
["regulation of pathway-restricted SMAD protein phosphorylation",1]
["regulation of peptidase activity",4]
["regulation of peptide secretion",2]
["regulation of peptide transport",12]
["regulation of peptidyl-lysine acetylation",6]
["regulation of peptidyl-serine phosphorylation",2]
["regulation of peptidyl-serine phosphorylation of STAT protein",1]
["regulation of peptidyl-threonine phosphorylation",3]
["regulation of peptidyl-tyrosine phosphorylation",2]
["regulation of peroxisome size",2]
["regulation of pH",7]
["regulation of phagosome maturation",1]
["regulation of phenylpropanoid metabolic process",3]
["regulation of phosphatase activity",9]
["regulation of phosphate metabolic process",48]
["regulation of phosphatidylinositol 3-kinase activity",1]
["regulation of phospholipase A2 activity",1]
["regulation of phospholipase activity",3]
["regulation of phospholipase C activity",1]
["regulation of phospholipid biosynthetic process",1]
["regulation of phospholipid metabolic process",2]
["regulation of phospholipid translocation",1]
["regulation of phospholipid transport",1]
["regulation of phosphoprotein phosphatase activity",8]
["regulation of phosphorelay signal transduction system",6]
["regulation of phosphorus metabolic process",48]
["regulation of phosphorylation",37]
["regulation of phosphorylation of RNA polymerase II C-terminal domain",2]
["regulation of photomorphogenesis",5]
["regulation of photoperiodism- flowering",9]
["regulation of photosynthesis",11]
["regulation of photosynthesis- light reaction",7]
["regulation of phytol biosynthetic process",1]
["regulation of pinocytosis",1]
["regulation of plant organ formation",7]
["regulation of plant organ morphogenesis",2]
["regulation of plant-type cell wall cellulose biosynthetic process",2]
["regulation of plant-type hypersensitive response",5]
["regulation of plasma membrane bounded cell projection assembly",4]
["regulation of plasma membrane bounded cell projection organization",8]
["regulation of podosome assembly",1]
["regulation of polysaccharide biosynthetic process",4]
["regulation of polysaccharide metabolic process",4]
["regulation of post-embryonic development",54]
["regulation of post-embryonic root development",4]
["regulation of postsynaptic membrane potential",1]
["regulation of posttranscriptional gene silencing",7]
["regulation of potassium ion transmembrane transport",1]
["regulation of potassium ion transmembrane transporter activity",1]
["regulation of potassium ion transport",1]
["regulation of pri-miRNA transcription by RNA polymerase II",1]
["regulation of primary metabolic process",279]
["regulation of pro-B cell differentiation",1]
["regulation of production of miRNAs involved in gene silencing by miRNA",1]
["regulation of production of molecular mediator of immune response",1]
["regulation of production of siRNA involved in RNA interference",2]
["regulation of production of small RNA involved in gene silencing by RNA",3]
["regulation of programmed cell death",25]
["regulation of proteasomal protein catabolic process",8]
["regulation of proteasomal ubiquitin-dependent protein catabolic process",6]
["regulation of protein acetylation",6]
["regulation of protein catabolic process",12]
["regulation of protein complex stability",1]
["regulation of protein deacetylation",1]
["regulation of protein dephosphorylation",8]
["regulation of protein depolymerization",1]
["regulation of protein deubiquitination",1]
["regulation of protein exit from endoplasmic reticulum",3]
["regulation of protein export from nucleus",3]
["regulation of protein geranylgeranylation",2]
["regulation of protein glycosylation",1]
["regulation of protein glycosylation in Golgi",1]
["regulation of protein import",3]
["regulation of protein import into chloroplast stroma",1]
["regulation of protein import into nucleus",2]
["regulation of protein K63-linked deubiquitination",1]
["regulation of protein K63-linked ubiquitination",1]
["regulation of protein kinase activity",25]
["regulation of protein kinase B signaling",1]
["regulation of protein localization",14]
["regulation of protein localization to cell surface",2]
["regulation of protein localization to kinetochore",1]
["regulation of protein localization to nucleus",3]
["regulation of protein maturation",1]
["regulation of protein metabolic process",94]
["regulation of protein modification by small protein conjugation or removal",5]
["regulation of protein modification process",58]
["regulation of protein phosphorylation",33]
["regulation of protein polymerization",8]
["regulation of protein polyubiquitination",1]
["regulation of protein processing",1]
["regulation of protein secretion",2]
["regulation of protein serine/threonine kinase activity",14]
["regulation of protein stability",5]
["regulation of protein targeting",2]
["regulation of protein targeting to mitochondrion",1]
["regulation of protein transport",12]
["regulation of protein tyrosine kinase activity",1]
["regulation of protein ubiquitination",4]
["regulation of protein-containing complex assembly",20]
["regulation of protein-containing complex disassembly",4]
["regulation of proteolysis",15]
["regulation of proteolysis involved in cellular protein catabolic process",8]
["regulation of proton transport",1]
["regulation of pseudopodium assembly",1]
["regulation of purine nucleotide biosynthetic process",3]
["regulation of purine nucleotide metabolic process",3]
["regulation of radial pattern formation",1]
["regulation of Ras protein signal transduction",2]
["regulation of reactive oxygen species metabolic process",4]
["regulation of receptor internalization",3]
["regulation of receptor signaling pathway via JAK-STAT",2]
["regulation of receptor signaling pathway via STAT",2]
["regulation of receptor-mediated endocytosis",3]
["regulation of reciprocal meiotic recombination",2]
["regulation of red or far-red light signaling pathway",1]
["regulation of release of sequestered calcium ion into cytosol",1]
["regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum",1]
["regulation of reproductive process",53]
["regulation of response to alcohol",13]
["regulation of response to biotic stimulus",13]
["regulation of response to cytokine stimulus",1]
["regulation of response to DNA damage stimulus",9]
["regulation of response to drug",4]
["regulation of response to endoplasmic reticulum stress",3]
["regulation of response to external stimulus",15]
["regulation of response to osmotic stress",3]
["regulation of response to oxidative stress",4]
["regulation of response to reactive oxygen species",2]
["regulation of response to red or far red light",8]
["regulation of response to salt stress",3]
["regulation of response to stimulus",157]
["regulation of response to stress",69]
["regulation of response to water deprivation",5]
["regulation of response to wounding",1]
["regulation of ribonucleoprotein complex localization",1]
["regulation of ribosome biogenesis",2]
["regulation of RNA biosynthetic process",142]
["regulation of RNA export from nucleus",2]
["regulation of RNA interference",3]
["regulation of RNA metabolic process",161]
["regulation of RNA polymerase II regulatory region sequence-specific DNA binding",1]
["regulation of RNA polymerase II transcription preinitiation complex assembly",1]
["regulation of RNA splicing",7]
["regulation of RNA stability",8]
["regulation of root development",15]
["regulation of root meristem growth",9]
["regulation of root morphogenesis",1]
["regulation of rRNA processing",2]
["regulation of ruffle assembly",2]
["regulation of salicylic acid mediated signaling pathway",4]
["regulation of salicylic acid metabolic process",2]
["regulation of sarcomere organization",1]
["regulation of secondary metabolic process",4]
["regulation of secondary metabolite biosynthetic process",4]
["regulation of secondary shoot formation",5]
["regulation of secretion",5]
["regulation of secretion by cell",5]
["regulation of seed development",7]
["regulation of seed dormancy process",1]
["regulation of seed germination",9]
["regulation of seed growth",5]
["regulation of seed maturation",1]
["regulation of seedling development",11]
["regulation of septation initiation signaling",1]
["regulation of sequestering of calcium ion",1]
["regulation of sequestering of triglyceride",1]
["regulation of shade avoidance",1]
["regulation of shoot apical meristem development",1]
["regulation of shoot system development",32]
["regulation of shoot system morphogenesis",6]
["regulation of short-day photoperiodism- flowering",3]
["regulation of short-term neuronal synaptic plasticity",1]
["regulation of signal transduction",87]
["regulation of signal transduction by p53 class mediator",4]
["regulation of signaling",91]
["regulation of signaling receptor activity",1]
["regulation of sinapate ester biosynthetic process",1]
["regulation of single-species biofilm formation",1]
["regulation of sister chromatid segregation",12]
["regulation of small GTPase mediated signal transduction",2]
["regulation of small molecule metabolic process",15]
["regulation of smooth muscle cell proliferation",1]
["regulation of smooth muscle contraction",1]
["regulation of smoothened signaling pathway",2]
["regulation of SNARE complex assembly",3]
["regulation of sodium ion transport",1]
["regulation of sorocarp development",1]
["regulation of sorocarp spore cell differentiation",1]
["regulation of spindle checkpoint",3]
["regulation of sporulation",1]
["regulation of sprouting angiogenesis",1]
["regulation of starch biosynthetic process",1]
["regulation of starch metabolic process",1]
["regulation of stem cell differentiation",2]
["regulation of stem cell division",3]
["regulation of stem cell population maintenance",2]
["regulation of sterigmatocystin biosynthetic process",1]
["regulation of steroid biosynthetic process",2]
["regulation of steroid metabolic process",2]
["regulation of sterol biosynthetic process",2]
["regulation of stomatal closure",2]
["regulation of stomatal movement",15]
["regulation of stress-activated MAPK cascade",2]
["regulation of stress-activated protein kinase signaling cascade",2]
["regulation of striated muscle cell apoptotic process",1]
["regulation of striated muscle cell differentiation",2]
["regulation of striated muscle contraction",1]
["regulation of striated muscle tissue development",1]
["regulation of sulfur amino acid metabolic process",3]
["regulation of sulfur metabolic process",4]
["regulation of supramolecular fiber organization",8]
["regulation of synapse assembly",1]
["regulation of synapse organization",1]
["regulation of synapse structure or activity",1]
["regulation of synaptic assembly at neuromuscular junction",1]
["regulation of synaptic plasticity",1]
["regulation of synaptic transmission- glutamatergic",2]
["regulation of synaptic vesicle cycle",1]
["regulation of synaptic vesicle recycling",1]
["regulation of syncytium formation by plasma membrane fusion",1]
["regulation of syringal lignin biosynthetic process",1]
["regulation of system process",3]
["regulation of systemic acquired resistance",4]
["regulation of telomerase activity",1]
["regulation of telomerase RNA localization to Cajal body",2]
["regulation of telomere maintenance",5]
["regulation of telomere maintenance via telomerase",4]
["regulation of telomere maintenance via telomere lengthening",4]
["regulation of tetrapyrrole biosynthetic process",3]
["regulation of tetrapyrrole metabolic process",4]
["regulation of timing of meristematic phase transition",6]
["regulation of timing of plant organ formation",1]
["regulation of timing of transition from vegetative to reproductive phase",6]
["regulation of tocopherol cyclase activity",1]
["regulation of TOR signaling",2]
["regulation of TORC1 signaling",1]
["regulation of trans-synaptic signaling",4]
["regulation of transcription by RNA polymerase I",1]
["regulation of transcription by RNA polymerase II",35]
["regulation of transcription by RNA polymerase III",1]
["regulation of transcription elongation from RNA polymerase II promoter",3]
["regulation of transcription from RNA polymerase II promoter in response to stress",1]
["regulation of transcription initiation from RNA polymerase II promoter",2]
["regulation of transcription involved in G1/S transition of mitotic cell cycle",1]
["regulation of transcription of nucleolar large rRNA by RNA polymerase I",1]
["regulation of transcription regulatory region DNA binding",1]
["regulation of transcription- DNA-templated",140]
["regulation of transferase activity",31]
["regulation of transforming growth factor beta receptor signaling pathway",1]
["regulation of translation",19]
["regulation of translational elongation",3]
["regulation of translational initiation",3]
["regulation of translational termination",1]
["regulation of transmembrane receptor protein serine/threonine kinase signaling pathway",4]
["regulation of transmembrane transport",5]
["regulation of transmembrane transporter activity",3]
["regulation of transport",46]
["regulation of transporter activity",3]
["regulation of trichome morphogenesis",1]
["regulation of triglyceride catabolic process",1]
["regulation of triglyceride metabolic process",1]
["regulation of tryptophan metabolic process",1]
["regulation of tumor necrosis factor production",1]
["regulation of tumor necrosis factor superfamily cytokine production",1]
["regulation of tumor necrosis factor-mediated signaling pathway",1]
["regulation of tyrosine phosphorylation of STAT protein",1]
["regulation of ubiquitin-dependent protein catabolic process",7]
["regulation of ubiquitin-protein transferase activity",1]
["regulation of ubiquitin-specific protease activity",1]
["regulation of unidimensional cell growth",3]
["regulation of urease activity",2]
["regulation of vacuolar transport",1]
["regulation of vacuole fusion- non-autophagic",2]
["regulation of vacuole organization",5]
["regulation of vasculature development",2]
["regulation of vegetative phase change",1]
["regulation of vernalization response",2]
["regulation of vesicle fusion",10]
["regulation of vesicle-mediated transport",20]
["regulation of viral genome replication",1]
["regulation of viral life cycle",1]
["regulation of viral process",3]
["regulation of vitamin E biosynthetic process",1]
["regulation of vitamin metabolic process",2]
["regulation of Wnt signaling pathway",6]
["regulation of Wnt signaling pathway- planar cell polarity pathway",1]
["regulation of wound healing",1]
["removal of superoxide radicals",1]
["renal system development",1]
["replication fork",15]
["replication fork processing",1]
["replication fork protection",1]
["replication fork protection complex",2]
["replication-born double-strand break repair via sister chromatid exchange",1]
["replisome",3]
["reproduction",247]
["reproduction of a single-celled organism",1]
["reproductive behavior",1]
["reproductive fruiting body development",1]
["reproductive process",244]
["reproductive process in single-celled organism",1]
["reproductive shoot system development",53]
["reproductive structure development",171]
["reproductive system development",171]
["rescue of stalled ribosome",1]
["resolution of meiotic recombination intermediates",5]
["resolution of recombination intermediates",1]
["respirasome",8]
["respiratory chain complex",8]
["respiratory chain complex I",6]
["respiratory chain complex II",1]
["respiratory chain complex III",1]
["respiratory chain complex IV assembly",1]
["respiratory electron transport chain",7]
["respiratory system development",5]
["respiratory tube development",3]
["response to abiotic stimulus",305]
["response to abscisic acid",64]
["response to absence of light",10]
["response to acetate",1]
["response to acid chemical",134]
["response to activity",1]
["response to alcohol",66]
["response to aluminum ion",2]
["response to amino acid",4]
["response to amino acid starvation",3]
["response to ammonium ion",1]
["response to anoxia",2]
["response to antibiotic",42]
["response to antineoplastic agent",1]
["response to arsenic-containing substance",4]
["response to ATP",1]
["response to auxin",33]
["response to bacterium",61]
["response to biotic stimulus",122]
["response to biotin",1]
["response to blue light",17]
["response to boron-containing substance",1]
["response to brassinosteroid",10]
["response to brefeldin A",1]
["response to bronchodilator",2]
["response to cadmium ion",66]
["response to calcium ion",3]
["response to cAMP",1]
["response to carbohydrate",34]
["response to cation stress",2]
["response to chemical",388]
["response to chitin",7]
["response to cobalt ion",1]
["response to cold",56]
["response to copper ion",2]
["response to copper ion starvation",2]
["response to curcumin",1]
["response to cycloheximide",2]
["response to cytokine",3]
["response to cytokinin",40]
["response to decreased oxygen levels",15]
["response to defenses of other organism",3]
["response to desiccation",2]
["response to disaccharide",18]
["response to drug",77]
["response to dsRNA",9]
["response to endogenous stimulus",180]
["response to endoplasmic reticulum stress",31]
["response to estrogen",2]
["response to ether",1]
["response to ethylene",28]
["response to external biotic stimulus",121]
["response to external stimulus",200]
["response to extracellular stimulus",63]
["response to far red light",9]
["response to flooding",1]
["response to fluid shear stress",1]
["response to freezing",4]
["response to fructose",4]
["response to fungicide",2]
["response to fungus",41]
["response to gamma radiation",5]
["response to gibberellin",10]
["response to glucose",9]
["response to gravity",11]
["response to growth factor",2]
["response to heat",33]
["response to herbivore",1]
["response to hexose",12]
["response to high light intensity",17]
["response to hormone",174]
["response to host",3]
["response to host defenses",3]
["response to host immune response",6]
["response to hydrogen peroxide",13]
["response to hypoxia",13]
["response to immobilization stress",1]
["response to indolebutyric acid",3]
["response to inorganic substance",151]
["response to insect",5]
["response to insulin",2]
["response to interferon-gamma",2]
["response to interleukin-1",1]
["response to ionizing radiation",13]
["response to iron ion",9]
["response to iron ion starvation",4]
["response to jasmonic acid",24]
["response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance",2]
["response to karrikin",15]
["response to ketone",3]
["response to leucine",1]
["response to light intensity",30]
["response to light stimulus",113]
["response to lipid",80]
["response to lipopolysaccharide",3]
["response to lithium ion",1]
["response to low fluence blue light stimulus by blue low-fluence system",3]
["response to low light intensity stimulus",4]
["response to magnesium ion",1]
["response to magnetism",1]
["response to maltose",1]
["response to manganese ion",1]
["response to mechanical stimulus",5]
["response to metal ion",88]
["response to microbial phytotoxin",1]
["response to misfolded protein",5]
["response to mitochondrial depolarisation",1]
["response to molecule of bacterial origin",6]
["response to molecule of fungal origin",2]
["response to monosaccharide",12]
["response to nematode",19]
["response to nerve growth factor",1]
["response to nitrate",6]
["response to nitric oxide",2]
["response to nitrogen compound",55]
["response to nitrosative stress",1]
["response to nutrient",9]
["response to nutrient levels",58]
["response to oomycetes",2]
["response to organic cyclic compound",48]
["response to organic substance",239]
["response to organonitrogen compound",37]
["response to organophosphorus",1]
["response to osmotic stress",99]
["response to other organism",121]
["response to oxidative stress",75]
["response to oxygen levels",15]
["response to oxygen radical",3]
["response to oxygen-containing compound",201]
["response to ozone",6]
["response to peptide",3]
["response to peptide hormone",3]
["response to pheromone",1]
["response to pheromone triggering conjugation with cellular fusion",1]
["response to photooxidative stress",1]
["response to potassium ion",1]
["response to purine-containing compound",1]
["response to radiation",126]
["response to reactive oxygen species",36]
["response to red light",8]
["response to red or far red light",26]
["response to redox state",2]
["response to salicylic acid",19]
["response to salt",1]
["response to salt stress",86]
["response to silver ion",1]
["response to singlet oxygen",4]
["response to starvation",46]
["response to steroid hormone",6]
["response to stimulus",742]
["response to stress",468]
["response to strigolactone",1]
["response to sucrose",18]
["response to superoxide",1]
["response to symbiont",4]
["response to symbiotic fungus",3]
["response to temperature stimulus",89]
["response to topologically incorrect protein",12]
["response to toxic substance",31]
["response to transforming growth factor beta",1]
["response to trichostatin A",1]
["response to tumor necrosis factor",1]
["response to unfolded protein",8]
["response to UV",26]
["response to UV-A",1]
["response to UV-B",12]
["response to UV-C",3]
["response to virus",7]
["response to vitamin",3]
["response to vitamin B1",1]
["response to vitamin D",1]
["response to water",40]
["response to water deprivation",40]
["response to wounding",32]
["response to xenobiotic stimulus",1]
["response to zinc ion",8]
["reticulophagy",1]
["retrograde protein transport- ER to cytosol",2]
["retrograde transport- endosome to Golgi",8]
["retrograde transport- vesicle recycling within Golgi",1]
["retrograde vesicle-mediated transport- Golgi to endoplasmic reticulum",7]
["retromer complex",3]
["retromer complex binding",1]
["retromer- cargo-selective complex",1]
["rhamnogalacturonan I metabolic process",1]
["rhamnogalacturonan I side chain metabolic process",1]
["rhamnogalacturonan II biosynthetic process",1]
["rhamnogalacturonan II metabolic process",1]
["Rho protein signal transduction",1]
["rhythmic process",16]
["riboflavin biosynthetic process",4]
["riboflavin kinase activity",1]
["riboflavin metabolic process",4]
["riboflavin synthase activity",1]
["ribonuclease activity",17]
["ribonuclease H2 complex",1]
["ribonuclease inhibitor activity",1]
["ribonuclease MRP complex",1]
["ribonuclease P complex",1]
["ribonucleoprotein complex",110]
["ribonucleoprotein complex assembly",32]
["ribonucleoprotein complex binding",11]
["ribonucleoprotein complex biogenesis",90]
["ribonucleoprotein complex disassembly",2]
["ribonucleoprotein complex export from nucleus",18]
["ribonucleoprotein complex localization",18]
["ribonucleoprotein complex subunit organization",33]
["ribonucleoprotein granule",17]
["ribonucleoside binding",15]
["ribonucleoside biosynthetic process",8]
["ribonucleoside bisphosphate biosynthetic process",5]
["ribonucleoside bisphosphate catabolic process",1]
["ribonucleoside bisphosphate metabolic process",10]
["ribonucleoside catabolic process",1]
["ribonucleoside diphosphate biosynthetic process",1]
["ribonucleoside diphosphate metabolic process",11]
["ribonucleoside metabolic process",13]
["ribonucleoside monophosphate biosynthetic process",17]
["ribonucleoside monophosphate metabolic process",25]
["ribonucleoside triphosphate biosynthetic process",13]
["ribonucleoside triphosphate metabolic process",21]
["ribonucleotide binding",57]
["ribonucleotide biosynthetic process",29]
["ribonucleotide catabolic process",1]
["ribonucleotide metabolic process",42]
["ribose phosphate biosynthetic process",29]
["ribose phosphate diphosphokinase activity",1]
["ribose phosphate metabolic process",46]
["ribosomal large subunit assembly",9]
["ribosomal large subunit biogenesis",23]
["ribosomal large subunit export from nucleus",1]
["ribosomal protein import into nucleus",3]
["ribosomal small subunit assembly",2]
["ribosomal small subunit binding",1]
["ribosomal small subunit biogenesis",13]
["ribosomal subunit",16]
["ribosomal subunit export from nucleus",2]
["ribosome",29]
["ribosome assembly",15]
["ribosome binding",7]
["ribosome biogenesis",74]
["ribosome disassembly",2]
["ribosome localization",2]
["ribulose-1-5-bisphosphate carboxylase/oxygenase activator activity",1]
["ribulose-phosphate 3-epimerase activity",2]
["RNA (guanine-N7)-methylation",2]
["RNA 3' uridylation",2]
["RNA 3'-end processing",24]
["RNA 5'-end processing",2]
["RNA acetylation",1]
["RNA binding",154]
["RNA biosynthetic process",36]
["RNA cap binding",2]
["RNA cap binding complex",4]
["RNA capping",1]
["RNA catabolic process",32]
["RNA destabilization",1]
["RNA export from nucleus",20]
["RNA folding",1]
["RNA guanylyltransferase activity",1]
["RNA helicase activity",64]
["RNA interference",5]
["RNA localization",25]
["RNA metabolic process",257]
["RNA methylation",17]
["RNA methyltransferase activity",12]
["RNA modification",64]
["RNA N6-methyladenosine methyltransferase complex",2]
["RNA nuclear export complex",1]
["RNA phosphodiester bond hydrolysis",32]
["RNA phosphodiester bond hydrolysis- endonucleolytic",13]
["RNA phosphodiester bond hydrolysis- exonucleolytic",10]
["RNA polyadenylation",11]
["RNA polymerase activity",5]
["RNA polymerase binding",6]
["RNA polymerase complex",21]
["RNA polymerase core enzyme binding",3]
["RNA polymerase I complex",2]
["RNA polymerase II C-terminal domain binding",1]
["RNA polymerase II C-terminal domain phosphoserine binding",1]
["RNA polymerase II cis-regulatory region sequence-specific DNA binding",2]
["RNA polymerase II complex binding",3]
["RNA polymerase II general transcription initiation factor binding",1]
["RNA polymerase II preinitiation complex assembly",1]
["RNA polymerase II transcription regulator complex",12]
["RNA polymerase II transcription regulatory region sequence-specific DNA binding",8]
["RNA polymerase II transcription repressor complex",1]
["RNA polymerase II- core complex",2]
["RNA polymerase II- holoenzyme",14]
["RNA polymerase II-specific DNA-binding transcription factor binding",9]
["RNA polymerase III complex",1]
["RNA polymerase III transcription regulator complex",1]
["RNA polymerase III transcription regulatory region sequence-specific DNA binding",1]
["RNA polymerase III type 3 promoter sequence-specific DNA binding",1]
["RNA polymerase IV complex",2]
["RNA polymerase V complex",2]
["RNA processing",151]
["RNA repair",1]
["RNA secondary structure unwinding",23]
["RNA splicing",44]
["RNA splicing- via endonucleolytic cleavage and ligation",2]
["RNA splicing- via transesterification reactions",36]
["RNA splicing- via transesterification reactions with bulged adenosine as nucleophile",36]
["RNA stabilization",3]
["RNA stem-loop binding",3]
["RNA surveillance",8]
["RNA transport",22]
["RNA uridylyltransferase activity",3]
["RNA-dependent DNA biosynthetic process",4]
["RNA-DNA hybrid ribonuclease activity",1]
["roof of mouth development",1]
["root cap development",2]
["root development",92]
["root epidermal cell differentiation",24]
["root hair",2]
["root hair cell development",16]
["root hair cell differentiation",20]
["root hair cell tip growth",2]
["root hair elongation",9]
["root hair initiation",1]
["root hair tip",1]
["root meristem growth",2]
["root meristem specification",2]
["root morphogenesis",54]
["root system development",92]
["rough endoplasmic reticulum",3]
["rough endoplasmic reticulum membrane",2]
["rRNA (adenine-N6-)-methyltransferase activity",1]
["rRNA (adenine-N6-N6-)-dimethyltransferase activity",1]
["rRNA (adenine) methyltransferase activity",2]
["rRNA (cytosine-C5-)-methyltransferase activity",2]
["rRNA (cytosine-N4-)-methyltransferase activity",1]
["rRNA (cytosine) methyltransferase activity",3]
["rRNA (guanine-N7)-methylation",1]
["rRNA (guanine) methyltransferase activity",2]
["rRNA (pseudouridine) methyltransferase activity",1]
["rRNA (uridine-2'-O-)-methyltransferase activity",1]
["rRNA (uridine) methyltransferase activity",1]
["rRNA 2'-O-methylation",1]
["rRNA 3'-end processing",5]
["rRNA 5'-end processing",1]
["rRNA acetylation",1]
["rRNA acetylation involved in maturation of SSU-rRNA",1]
["rRNA base methylation",6]
["rRNA binding",8]
["rRNA catabolic process",8]
["rRNA cytidine N-acetyltransferase activity",1]
["rRNA export from nucleus",1]
["rRNA metabolic process",60]
["rRNA methylation",10]
["rRNA methyltransferase activity",8]
["rRNA modification",18]
["rRNA processing",59]
["rRNA pseudouridine synthesis",6]
["rRNA transport",1]
["rRNA-containing ribonucleoprotein complex export from nucleus",3]
["RSC-type complex",1]
["ruffle",2]
["ruffle membrane",2]
["S-acyltransferase activity",1]
["S-adenosyl-L-methionine binding",3]
["S-adenosylhomocysteine metabolic process",1]
["S-adenosylmethionine catabolic process",1]
["S-adenosylmethionine metabolic process",5]
["S-adenosylmethionine-dependent methyltransferase activity",46]
["S-formylglutathione hydrolase activity",1]
["S-glycoside biosynthetic process",3]
["S-glycoside catabolic process",3]
["S-glycoside metabolic process",7]
["S-methyltransferase activity",1]
["saccharopine dehydrogenase activity",1]
["SAGA complex",1]
["SAGA-type complex",1]
["salicylic acid catabolic process",1]
["salicylic acid mediated signaling pathway",9]
["salicylic acid metabolic process",1]
["salivary gland development",1]
["sarcolemma",1]
["sarcomere",1]
["SCAR complex",3]
["SCF ubiquitin ligase complex",7]
["SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",3]
["Schwann cell differentiation",1]
["Schwann cell proliferation",1]
["Sec62/Sec63 complex",1]
["second-messenger-mediated signaling",6]
["secondary active transmembrane transporter activity",28]
["secondary alcohol biosynthetic process",1]
["secondary alcohol metabolic process",1]
["secondary cell wall",2]
["secondary metabolic process",32]
["secondary metabolite biosynthetic process",22]
["secondary plasmodesma",1]
["secondary shoot formation",6]
["secretion",20]
["secretion by cell",19]
["secretory granule",5]
["secretory granule lumen",1]
["secretory granule maturation",1]
["secretory granule membrane",3]
["secretory granule organization",2]
["secretory vesicle",7]
["sedoheptulose-bisphosphatase activity",1]
["seed coat development",7]
["seed development",104]
["seed dormancy process",2]
["seed germination",11]
["seed maturation",4]
["seed oilbody biogenesis",1]
["seedling development",14]
["selective autophagy",3]
["selenium compound metabolic process",3]
["sensory organ development",3]
["sensory organ morphogenesis",2]
["sensory perception",2]
["sensory perception of light stimulus",1]
["sensory perception of mechanical stimulus",1]
["sensory perception of sound",1]
["sepal development",2]
["sepal formation",1]
["sepal morphogenesis",1]
["sepal vascular tissue pattern formation",1]
["septum digestion after cytokinesis",1]
["sequence-specific DNA binding",41]
["sequence-specific double-stranded DNA binding",12]
["sequence-specific single stranded DNA binding",1]
["serine C-palmitoyltransferase activity",1]
["serine C-palmitoyltransferase complex",2]
["serine family amino acid biosynthetic process",7]
["serine family amino acid catabolic process",2]
["serine family amino acid metabolic process",9]
["serine hydrolase activity",9]
["serine O-acetyltransferase activity",2]
["serine O-acyltransferase activity",2]
["serine racemase activity",1]
["serine transmembrane transporter activity",1]
["serine transport",1]
["serine-glyoxylate transaminase activity",1]
["serine-pyruvate transaminase activity",1]
["serine-tRNA ligase activity",1]
["serine-type carboxypeptidase activity",5]
["serine-type endopeptidase activity",4]
["serine-type exopeptidase activity",5]
["serine-type peptidase activity",9]
["serine/threonine protein kinase complex",8]
["seryl-tRNA aminoacylation",1]
["sesquiterpenoid biosynthetic process",3]
["sesquiterpenoid metabolic process",3]
["Set1C/COMPASS complex",2]
["sex differentiation",2]
["sexual reproduction",32]
["sexual sporulation",4]
["sexual sporulation resulting in formation of a cellular spore",1]
["SH2 domain binding",1]
["shade avoidance",3]
["shikimate 3-dehydrogenase (NADP+) activity",1]
["shikimate metabolic process",1]
["shoot apical meristem development",1]
["shoot axis formation",6]
["shoot system development",119]
["shoot system morphogenesis",30]
["short-chain carboxylesterase activity",1]
["short-chain fatty acid metabolic process",1]
["short-day photoperiodism",1]
["short-day photoperiodism- flowering",1]
["sialic acid transmembrane transporter activity",4]
["sialic acid transport",4]
["side of membrane",12]
["sieve element differentiation",1]
["sieve plate",1]
["sigma factor activity",2]
["signal peptide processing",1]
["signal recognition particle",1]
["signal recognition particle binding",1]
["signal recognition particle- endoplasmic reticulum targeting",1]
["signal release",3]
["signal release from synapse",3]
["signal sequence binding",8]
["signal transduction",166]
["signal transduction by p53 class mediator",2]
["signal transduction in response to DNA damage",4]
["signaling",159]
["signaling receptor activity",24]
["signaling receptor binding",14]
["signaling receptor complex adaptor activity",1]
["silent mating-type cassette heterochromatin assembly",1]
["simple leaf morphogenesis",2]
["Sin3 complex",1]
["Sin3-type complex",1]
["single base insertion or deletion binding",1]
["single fertilization",1]
["single strand break repair",1]
["single-stranded DNA binding",21]
["single-stranded DNA endodeoxyribonuclease activity",2]
["single-stranded RNA binding",17]
["single-stranded telomeric DNA binding",1]
["singlet oxygen-mediated programmed cell death",3]
["sister chromatid biorientation",1]
["sister chromatid cohesion",6]
["sister chromatid segregation",20]
["site of DNA damage",5]
["site of double-strand break",5]
["site of polarized growth",6]
["site-specific DNA-methyltransferase (adenine-specific) activity",1]
["skeletal system development",2]
["skeletal system morphogenesis",1]
["Ski complex",1]
["skin development",1]
["skin epidermis development",1]
["skotomorphogenesis",4]
["Sm-like protein family complex",15]
["SMAD binding",1]
["small GTPase binding",51]
["small GTPase mediated signal transduction",3]
["small molecule binding",91]
["small molecule biosynthetic process",130]
["small molecule catabolic process",51]
["small molecule metabolic process",303]
["small nuclear ribonucleoprotein complex",13]
["small nucleolar ribonucleoprotein complex assembly",1]
["small ribosomal subunit",8]
["small ribosomal subunit rRNA binding",1]
["small RNA loading onto RISC",2]
["small-subunit processome",8]
["SMC loading complex",1]
["SMN complex",1]
["SMN-Sm protein complex",1]
["smoothened signaling pathway",1]
["SNAP receptor activity",4]
["SNARE binding",9]
["SNARE complex",7]
["sno(s)RNA 3'-end processing",5]
["sno(s)RNA metabolic process",8]
["sno(s)RNA polyadenylation",2]
["sno(s)RNA processing",6]
["sno(s)RNA-containing ribonucleoprotein complex",6]
["snoRNA binding",6]
["snoRNA guided rRNA pseudouridine synthesis",1]
["snoRNA release from pre-rRNA",1]
["snoRNA splicing",1]
["snRNA (adenine-N6)-methylation",1]
["snRNA 3'-end processing",4]
["snRNA binding",4]
["snRNA metabolic process",8]
["snRNA modification",3]
["snRNA processing",5]
["snRNA pseudouridine synthesis",2]
["snRNA stem-loop binding",1]
["socially cooperative development",5]
["sodium ion export across plasma membrane",1]
["sodium ion homeostasis",1]
["sodium ion import across plasma membrane",1]
["sodium ion transmembrane transport",5]
["sodium ion transmembrane transporter activity",5]
["sodium ion transport",6]
["soluble NSF attachment protein activity",1]
["solute:cation antiporter activity",7]
["solute:cation symporter activity",5]
["solute:proton antiporter activity",4]
["solute:proton symporter activity",5]
["somatic diversification of immune receptors",1]
["somatic diversification of immune receptors via somatic mutation",1]
["somatic diversification of immunoglobulins",1]
["somatic hypermutation of immunoglobulin genes",1]
["somatic stem cell division",1]
["somatodendritic compartment",4]
["sorocarp development",5]
["sorocarp morphogenesis",1]
["spanning component of membrane",1]
["spanning component of plasma membrane",1]
["specification of axis polarity",1]
["specification of floral organ identity",4]
["specification of floral organ number",1]
["specification of plant organ identity",4]
["specification of plant organ number",1]
["specification of symmetry",4]
["sperm axoneme assembly",1]
["sperm chromatin condensation",1]
["sperm motility",1]
["spermatid development",3]
["spermatid differentiation",3]
["spermatid nucleus differentiation",2]
["spermatid nucleus elongation",1]
["spermatogenesis",4]
["spermatogenesis- exchange of chromosomal proteins",1]
["spermine synthase activity",1]
["sphinganine biosynthetic process",2]
["sphinganine kinase activity",1]
["sphinganine metabolic process",2]
["sphingoid biosynthetic process",4]
["sphingoid catabolic process",1]
["sphingoid metabolic process",6]
["sphingolipid alpha-glucuronosyltransferase activity",1]
["sphingolipid binding",1]
["sphingolipid biosynthetic process",8]
["sphingolipid catabolic process",3]
["sphingolipid mediated signaling pathway",2]
["sphingolipid metabolic process",15]
["sphingolipid transporter activity",2]
["sphingomyelin biosynthetic process",2]
["sphingomyelin metabolic process",2]
["sphingomyelin transfer activity",1]
["sphingosine biosynthetic process",4]
["sphingosine metabolic process",4]
["sphingosine N-acyltransferase activity",1]
["sphingosine-1-phosphate phosphatase activity",1]
["sphingosine-1-phosphate receptor activity",1]
["sphingosine-1-phosphate receptor signaling pathway",3]
["spinal cord development",2]
["spinal cord dorsal/ventral patterning",1]
["spinal cord motor neuron differentiation",1]
["spinal cord patterning",1]
["spindle",20]
["spindle assembly",8]
["spindle assembly checkpoint signaling",5]
["spindle assembly involved in male meiosis",1]
["spindle assembly involved in meiosis",1]
["spindle checkpoint signaling",5]
["spindle disassembly",2]
["spindle localization",1]
["spindle matrix",1]
["spindle microtubule",8]
["spindle midzone",4]
["spindle organization",17]
["spindle pole",5]
["spindle pole body",2]
["spindle pole body duplication",1]
["spindle pole body organization",1]
["spleen development",1]
["spliceosomal complex",30]
["spliceosomal complex assembly",5]
["spliceosomal conformational changes to generate catalytic conformation",2]
["spliceosomal snRNP assembly",1]
["spliceosomal snRNP complex",12]
["spliceosomal tri-snRNP complex",3]
["spore germination",1]
["spore-bearing structure development",1]
["sporocarp development",1]
["sporocarp development involved in asexual reproduction",1]
["sporopollenin biosynthetic process",3]
["sporulation",5]
["sporulation resulting in formation of a cellular spore",1]
["SPOTS complex",1]
["squalene synthase activity",1]
["SRP-dependent cotranslational protein targeting to membrane",1]
["SRP-dependent cotranslational protein targeting to membrane- translocation",1]
["stabilization of membrane potential",1]
["stamen development",17]
["stamen filament development",2]
["stamen formation",1]
["stamen morphogenesis",1]
["starch binding",1]
["starch biosynthetic process",7]
["starch catabolic process",11]
["starch grain",3]
["starch metabolic process",20]
["starch synthase activity",2]
["stem cell differentiation",1]
["stem cell division",1]
["stem cell population maintenance",13]
["stem cell proliferation",1]
["stem vascular tissue pattern formation",2]
["stereocilium bundle",1]
["sterigmatocystin biosynthetic process",1]
["sterigmatocystin metabolic process",1]
["steroid binding",2]
["steroid biosynthetic process",15]
["steroid hormone mediated signaling pathway",6]
["steroid metabolic process",16]
["steroid receptor RNA activator RNA binding",1]
["sterol 14-demethylase activity",1]
["sterol 24-C-methyltransferase activity",1]
["sterol binding",1]
["sterol biosynthetic process",10]
["sterol delta7 reductase activity",1]
["sterol desaturase activity",2]
["sterol homeostasis",1]
["sterol metabolic process",14]
["sterol transport",1]
["sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity",1]
["stomatal closure",3]
["stomatal complex development",7]
["stomatal complex formation",1]
["stomatal complex morphogenesis",6]
["stomatal complex patterning",1]
["stomatal lineage progression",1]
["stomatal movement",9]
["stomatal opening",1]
["storage vacuole",7]
["strand invasion",5]
["stress granule assembly",2]
["stress response to cadmium ion",1]
["stress response to metal ion",1]
["stress-activated protein kinase signaling cascade",7]
["striated muscle cell development",1]
["striated muscle cell differentiation",2]
["striated muscle tissue development",2]
["strigolactone biosynthetic process",2]
["strigolactone metabolic process",2]
["stromal side of plastid thylakoid membrane",2]
["stromule",12]
["structural constituent of cytoskeleton",6]
["structural constituent of nuclear pore",4]
["structural constituent of ribosome",18]
["structural molecule activity",36]
["suberin biosynthetic process",6]
["suberin network",1]
["succinate dehydrogenase activity",1]
["succinate dehydrogenase complex",1]
["succinate dehydrogenase complex (ubiquinone)",1]
["succinate metabolic process",3]
["succinate-CoA ligase (ADP-forming) activity",1]
["succinate-CoA ligase activity",1]
["succinate-semialdehyde dehydrogenase (NAD+) activity",1]
["succinyl-CoA metabolic process",1]
["sucrose biosynthetic process",3]
["sucrose catabolic process",3]
["sucrose metabolic process",8]
["sucrose transmembrane transporter activity",1]
["sucrose transport",2]
["sugar mediated signaling pathway",13]
["sugar transmembrane transporter activity",7]
["sugar-phosphatase activity",4]
["sulfate adenylyltransferase (ATP) activity",1]
["sulfate adenylyltransferase activity",1]
["sulfate assimilation",4]
["sulfate assimilation- phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)",2]
["sulfate binding",1]
["sulfate ion homeostasis",2]
["sulfate reduction",3]
["sulfate transmembrane transport",2]
["sulfate transmembrane transporter activity",2]
["sulfate transport",2]
["sulfide oxidation",1]
["sulfide oxidation- using siroheme sulfite reductase",1]
["sulfite reductase (ferredoxin) activity",1]
["sulfite reductase activity",1]
["sulfolipid biosynthetic process",1]
["sulfolipid metabolic process",1]
["sulfotransferase activity",2]
["sulfur amino acid biosynthetic process",6]
["sulfur amino acid catabolic process",2]
["sulfur amino acid metabolic process",11]
["sulfur amino acid transmembrane transporter activity",1]
["sulfur amino acid transport",1]
["sulfur compound binding",4]
["sulfur compound biosynthetic process",23]
["sulfur compound catabolic process",8]
["sulfur compound metabolic process",53]
["sulfur compound transmembrane transporter activity",4]
["sulfur compound transport",6]
["sulfur dioxygenase activity",1]
["sulfurtransferase activity",7]
["SUMO activating enzyme activity",1]
["SUMO binding",1]
["SUMO ligase activity",2]
["SUMO transferase activity",3]
["superoxide dismutase activity",1]
["superoxide metabolic process",1]
["supramolecular complex",22]
["supramolecular fiber",19]
["supramolecular fiber organization",25]
["supramolecular polymer",19]
["suspensor development",1]
["SWI/SNF complex",4]
["SWI/SNF superfamily-type complex",9]
["Swr1 complex",1]
["symplast",123]
["symporter activity",6]
["synapse",9]
["synapse assembly",1]
["synapse organization",1]
["synaptic assembly at neuromuscular junction",1]
["synaptic membrane",3]
["synaptic signaling",3]
["synaptic vesicle",3]
["synaptic vesicle cycle",3]
["synaptic vesicle endocytosis",2]
["synaptic vesicle exocytosis",1]
["synaptic vesicle localization",1]
["synaptic vesicle membrane",2]
["synaptic vesicle priming",1]
["synaptic vesicle recycling",2]
["synaptic vesicle transport",1]
["synaptonemal complex",2]
["synaptonemal structure",2]
["synergid death",1]
["syntaxin binding",4]
["syntaxin-1 binding",1]
["system development",312]
["system process",7]
["systemic acquired resistance",11]
["systemic acquired resistance- salicylic acid mediated signaling pathway",5]
["T cell receptor signaling pathway",2]
["T-tubule",1]
["tail-anchored membrane protein insertion into ER membrane",2]
["TAT protein transport complex",1]
["taxis",10]
["TBP-class protein binding",1]
["telencephalon development",4]
["telomerase holoenzyme complex",1]
["telomerase holoenzyme complex assembly",1]
["telomerase RNA binding",2]
["telomerase RNA stabilization",1]
["telomere cap complex",2]
["telomere capping",3]
["telomere localization",1]
["telomere maintenance",12]
["telomere maintenance in response to DNA damage",3]
["telomere maintenance via recombination",1]
["telomere maintenance via semi-conservative replication",2]
["telomere maintenance via telomerase",4]
["telomere maintenance via telomere lengthening",4]
["telomere organization",12]
["telomere tethering at nuclear periphery",1]
["telomeric DNA binding",7]
["telomeric loop formation",2]
["temperature compensation of the circadian clock",1]
["terminal bouton",2]
["termination of RNA polymerase II transcription",3]
["terpene biosynthetic process",2]
["terpene catabolic process",2]
["terpene metabolic process",4]
["terpenoid biosynthetic process",20]
["terpenoid biosynthetic process- mevalonate-independent",1]
["terpenoid catabolic process",1]
["terpenoid metabolic process",27]
["terpenoid transport",1]
["tertiary alcohol biosynthetic process",1]
["tertiary alcohol metabolic process",1]
["tetrahydrobiopterin biosynthetic process",1]
["tetrahydrobiopterin metabolic process",1]
["tetrahydrofolate biosynthetic process",1]
["tetrahydrofolate metabolic process",2]
["tetrahydrofolylpolyglutamate biosynthetic process",2]
["tetrahydrofolylpolyglutamate metabolic process",2]
["tetrahydrofolylpolyglutamate synthase activity",2]
["tetraketide alpha-pyrone synthase activity",1]
["tetrapyrrole binding",7]
["tetrapyrrole biosynthetic process",15]
["tetrapyrrole catabolic process",4]
["tetrapyrrole metabolic process",20]
["tetraterpenoid biosynthetic process",9]
["tetraterpenoid catabolic process",1]
["tetraterpenoid metabolic process",14]
["TFIIB-class transcription factor binding",1]
["thermospermine synthase activity",1]
["thiamine biosynthetic process",4]
["thiamine diphosphate biosynthetic process",1]
["thiamine diphosphate metabolic process",1]
["thiamine diphosphokinase activity",1]
["thiamine metabolic process",5]
["thiamine salvage",1]
["thiamine-containing compound biosynthetic process",4]
["thiamine-containing compound metabolic process",5]
["thiamine-phosphate diphosphorylase activity",1]
["thiazole biosynthetic process",1]
["thiazole metabolic process",1]
["thioester biosynthetic process",3]
["thioester metabolic process",7]
["thiol-dependent deubiquitinase",4]
["thiolester hydrolase activity",4]
["thioredoxin-disulfide reductase activity",1]
["thiosulfate sulfurtransferase activity",1]
["THO complex",7]
["THO complex part of transcription export complex",1]
["threonine racemase activity",1]
["threonine-tRNA ligase activity",1]
["threonyl-tRNA aminoacylation",1]
["thylakoid",106]
["thylakoid light-harvesting complex",1]
["thylakoid lumen",17]
["thylakoid membrane",68]
["thylakoid membrane organization",12]
["thymidine kinase activity",1]
["thymidine metabolic process",1]
["thyroid hormone receptor binding",2]
["Tic complex",2]
["TIM23 mitochondrial import inner membrane translocase complex",4]
["tissue development",117]
["tissue homeostasis",1]
["tissue migration",1]
["tissue morphogenesis",6]
["tissue regeneration",1]
["tissue remodeling",1]
["Toc complex",1]
["TOC-TIC supercomplex I",2]
["tocopherol cyclase activity",1]
["tocopherol O-methyltransferase activity",1]
["tongue development",1]
["tongue morphogenesis",1]
["TOR complex",1]
["TOR signaling",3]
["TORC1 complex",1]
["toxin biosynthetic process",2]
["toxin catabolic process",1]
["toxin metabolic process",4]
["toxin transport",1]
["TPR domain binding",1]
["trachea development",1]
["tracheary element differentiation",2]
["trans-Golgi network",63]
["trans-Golgi network membrane",6]
["trans-Golgi network transport vesicle",2]
["trans-Golgi network transport vesicle membrane",1]
["trans-octaprenyltranstransferase activity",1]
["trans-synaptic signaling",3]
["transaminase activity",12]
["transcription by RNA polymerase I",1]
["transcription by RNA polymerase II",19]
["transcription by RNA polymerase III",1]
["transcription cis-regulatory region binding",19]
["transcription coactivator activity",6]
["transcription coregulator activity",13]
["transcription coregulator binding",2]
["transcription corepressor activity",6]
["transcription corepressor binding",2]
["transcription elongation factor complex",3]
["transcription elongation from RNA polymerase II promoter",3]
["transcription export complex",1]
["transcription export complex 2",1]
["transcription factor binding",14]
["transcription factor TFIID complex",2]
["transcription factor TFIIE complex",1]
["transcription factor TFIIH core complex",2]
["transcription factor TFIIH holo complex",4]
["transcription factor TFIIIB complex",1]
["transcription factor TFIIK complex",1]
["transcription initiation from RNA polymerase II promoter",5]
["transcription preinitiation complex assembly",1]
["transcription regulator activity",70]
["transcription regulator complex",27]
["transcription regulatory region nucleic acid binding",14]
["transcription repressor complex",11]
["transcription- DNA-templated",33]
["transcription-coupled nucleotide-excision repair",4]
["transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery",3]
["transcriptionally active chromatin",3]
["transcytosis",1]
["transferase activity",400]
["transferase activity- transferring alkyl or aryl (other than methyl) groups",23]
["transferase activity- transferring nitrogenous groups",12]
["transferase activity- transferring one-carbon groups",53]
["transferase activity- transferring phosphorus-containing groups",156]
["transferase activity- transferring sulphur-containing groups",10]
["transferase complex",93]
["transferase complex- transferring phosphorus-containing groups",29]
["transition metal ion binding",64]
["transition metal ion homeostasis",13]
["transition metal ion transmembrane transporter activity",11]
["transition metal ion transport",12]
["transketolase or transaldolase activity",3]
["translation",60]
["translation elongation factor activity",2]
["translation elongation factor binding",1]
["translation factor activity- RNA binding",12]
["translation initiation factor activity",4]
["translation initiation factor binding",4]
["translation preinitiation complex",2]
["translation regulator activity",1]
["translation reinitiation",1]
["translation release factor activity",5]
["translation release factor activity- codon nonspecific",1]
["translation release factor activity- codon specific",2]
["translation release factor complex",1]
["translation repressor activity",1]
["translation termination factor activity",5]
["translational elongation",3]
["translational initiation",13]
["translational termination",7]
["translesion synthesis",7]
["transmembrane receptor protein kinase activity",14]
["transmembrane receptor protein serine/threonine kinase activity",14]
["transmembrane receptor protein serine/threonine kinase signaling pathway",14]
["transmembrane receptor protein tyrosine kinase signaling pathway",1]
["transmembrane signaling receptor activity",18]
["transmembrane transport",167]
["transmembrane transporter activity",143]
["transmembrane transporter complex",1]
["transpiration",1]
["transport",338]
["transport along microtubule",5]
["transport of virus",1]
["transport of virus in host- cell to cell",1]
["transport of virus in multicellular host",1]
["transport vesicle",8]
["transport vesicle membrane",6]
["transporter activity",176]
["transporter complex",2]
["transsulfuration",1]
["TRAPP complex",1]
["traversing start control point of mitotic cell cycle",1]
["trehalase activity",3]
["trehalose biosynthetic process",2]
["trehalose catabolic process",2]
["trehalose metabolic process",4]
["trehalose metabolism in response to stress",1]
["trehalose-phosphatase activity",1]
["tricarboxylic acid cycle",6]
["tricarboxylic acid cycle enzyme complex",2]
["tricarboxylic acid metabolic process",7]
["tricarboxylic acid transmembrane transport",2]
["tricarboxylic acid transmembrane transporter activity",2]
["tricarboxylic acid transport",2]
["trichoblast differentiation",21]
["trichoblast maturation",20]
["trichome branching",5]
["trichome differentiation",17]
["trichome morphogenesis",14]
["trichome papilla formation",1]
["triglyceride biosynthetic process",3]
["triglyceride catabolic process",2]
["triglyceride homeostasis",1]
["triglyceride lipase activity",3]
["triglyceride metabolic process",5]
["triose-phosphate isomerase activity",1]
["tripeptide transmembrane transport",1]
["tripeptide transport",2]
["triphosphatase activity",1]
["trivalent inorganic anion homeostasis",2]
["tRNA (guanine-N7-)-methyltransferase activity",1]
["tRNA (guanine-N7)-methylation",1]
["tRNA (guanine) methyltransferase activity",1]
["tRNA (m1A) methyltransferase complex",2]
["tRNA 3'-end processing",1]
["tRNA 3'-trailer cleavage",1]
["tRNA 3'-trailer cleavage- endonucleolytic",1]
["tRNA 5'-end processing",1]
["tRNA 5'-leader removal",1]
["tRNA A64-2'-O-ribosylphosphate transferase activity",1]
["tRNA acetylation",1]
["tRNA aminoacylation",17]
["tRNA aminoacylation for mitochondrial protein translation",1]
["tRNA aminoacylation for protein translation",16]
["tRNA binding",7]
["tRNA catabolic process",3]
["tRNA dihydrouridine synthase activity",1]
["tRNA dihydrouridine synthesis",1]
["tRNA dimethylallyltransferase activity",1]
["tRNA export from nucleus",1]
["tRNA metabolic process",40]
["tRNA methylation",3]
["tRNA methylthiolation",1]
["tRNA methyltransferase activity",1]
["tRNA methyltransferase complex",3]
["tRNA modification",18]
["tRNA N-acetyltransferase activity",1]
["tRNA processing",21]
["tRNA pseudouridine synthesis",5]
["tRNA re-export from nucleus",1]
["tRNA splicing- via endonucleolytic cleavage and ligation",1]
["tRNA thio-modification",1]
["tRNA threonylcarbamoyladenosine metabolic process",3]
["tRNA threonylcarbamoyladenosine modification",2]
["tRNA transport",1]
["tRNA wobble base modification",3]
["tRNA wobble cytosine modification",1]
["tRNA wobble position uridine thiolation",1]
["tRNA wobble uridine modification",2]
["tRNA-containing ribonucleoprotein complex export from nucleus",1]
["tRNA-guanine transglycosylation",1]
["trophectodermal cell differentiation",1]
["tropism",10]
["tryptophan biosynthetic process",2]
["tryptophan catabolic process",2]
["tryptophan metabolic process",4]
["tryptophan synthase activity",1]
["tube development",10]
["tube formation",1]
["tube morphogenesis",5]
["tubular endosome",1]
["tubulin binding",21]
["tubulin complex assembly",2]
["tyrosine binding",1]
["tyrosine biosynthetic process",2]
["tyrosine catabolic process",2]
["tyrosine metabolic process",6]
["tyrosine-tRNA ligase activity",2]
["tyrosyl-DNA phosphodiesterase activity",1]
["tyrosyl-tRNA aminoacylation",1]
["U1 snRNA 3'-end processing",2]
["U1 snRNA binding",2]
["U1 snRNP",5]
["U11/U12 snRNP",1]
["U12-type spliceosomal complex",4]
["U2 snRNP",1]
["U2-type catalytic step 1 spliceosome",1]
["U2-type catalytic step 2 spliceosome",1]
["U2-type precatalytic spliceosome",1]
["U2-type prespliceosome",5]
["U2-type spliceosomal complex",11]
["U2AF complex",3]
["U3 snoRNA binding",1]
["U4 snRNA 3'-end processing",4]
["U4/U6 x U5 tri-snRNP complex",3]
["U5 snRNA 3'-end processing",2]
["U5 snRNP",3]
["U6 snRNA (adenine-(43)-N(6))-methyltransferase activity",1]
["U6 snRNA 3'-end binding",1]
["U6 snRNA binding",1]
["ubiquinol-cytochrome-c reductase activity",1]
["ubiquinone binding",1]
["ubiquinone biosynthetic process",4]
["ubiquinone biosynthetic process via 3-4-dihydroxy-5-polyprenylbenzoate",1]
["ubiquinone metabolic process",4]
["ubiquinone-6 biosynthetic process",1]
["ubiquinone-6 metabolic process",1]
["ubiquitin binding",6]
["ubiquitin conjugating enzyme binding",4]
["ubiquitin ligase complex",35]
["ubiquitin modification-dependent histone binding",1]
["ubiquitin protein ligase activity",25]
["ubiquitin protein ligase binding",17]
["ubiquitin-dependent ERAD pathway",10]
["ubiquitin-dependent protein binding",1]
["ubiquitin-dependent protein catabolic process",48]
["ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",4]
["ubiquitin-like modifier activating enzyme activity",4]
["ubiquitin-like protein binding",7]
["ubiquitin-like protein conjugating enzyme binding",4]
["ubiquitin-like protein ligase activity",27]
["ubiquitin-like protein ligase binding",17]
["ubiquitin-like protein transferase activity",46]
["ubiquitin-like protein-specific protease activity",4]
["ubiquitin-protein transferase activator activity",1]
["ubiquitin-protein transferase activity",42]
["ubiquitin-protein transferase regulator activity",1]
["ubiquitin-specific protease binding",3]
["ubiquitin-ubiquitin ligase activity",2]
["ubiquitination-like modification-dependent protein binding",1]
["UDP-arabinose 4-epimerase activity",1]
["UDP-D-galactose metabolic process",1]
["UDP-galactose transmembrane transport",5]
["UDP-galactose transmembrane transporter activity",5]
["UDP-galactose:N-glycan beta-1-3-galactosyltransferase activity",1]
["UDP-galactosyltransferase activity",6]
["UDP-glucose metabolic process",4]
["UDP-glucose transmembrane transport",4]
["UDP-glucose transmembrane transporter activity",4]
["UDP-glucose:glycoprotein glucosyltransferase activity",1]
["UDP-glucosylation",1]
["UDP-glucosyltransferase activity",6]
["UDP-glucuronate decarboxylase activity",2]
["UDP-glucuronate metabolic process",1]
["UDP-glycosyltransferase activity",26]
["UDP-L-arabinose metabolic process",1]
["UDP-N-acetylgalactosamine diphosphorylase activity",1]
["UDP-N-acetylgalactosamine metabolic process",1]
["UDP-N-acetylgalactosamine transmembrane transport",1]
["UDP-N-acetylgalactosamine transmembrane transporter activity",1]
["UDP-N-acetylglucosamine biosynthetic process",2]
["UDP-N-acetylglucosamine diphosphorylase activity",1]
["UDP-N-acetylglucosamine metabolic process",2]
["UDP-N-acetylglucosamine transmembrane transport",1]
["UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity",1]
["UDP-xylosyltransferase activity",3]
["UFM1 hydrolase activity",1]
["UFM1 transferase activity",1]
["UMP biosynthetic process",3]
["UMP metabolic process",3]
["unfolded protein binding",12]
["unidimensional cell growth",41]
["unsaturated fatty acid biosynthetic process",3]
["unsaturated fatty acid metabolic process",5]
["uracil catabolic process",3]
["uracil metabolic process",3]
["urate oxidase activity",1]
["urea cycle",2]
["urea metabolic process",2]
["urea transmembrane transport",2]
["urea transmembrane transporter activity",2]
["urea transport",2]
["ureide catabolic process",4]
["ureide metabolic process",4]
["ureidoglycine aminohydrolase activity",1]
["ureidoglycolate hydrolase activity",1]
["uridine kinase activity",3]
["uridine-diphosphatase activity",1]
["uridylyltransferase activity",6]
["urogenital system development",2]
["uropod",1]
["uropod organization",1]
["uropod retraction",1]
["UTP-monosaccharide-1-phosphate uridylyltransferase activity",3]
["UTP:arabinose-1-phosphate uridylyltransferase activity",1]
["UTP:galactose-1-phosphate uridylyltransferase activity",1]
["UTP:glucose-1-phosphate uridylyltransferase activity",3]
["UTP:xylose-1-phosphate uridylyltransferase activity",1]
["UV-damage excision repair",3]
["vacuolar acidification",3]
["vacuolar lumen",3]
["vacuolar membrane",98]
["vacuolar protein processing",3]
["vacuolar proton-transporting V-type ATPase complex",2]
["vacuolar proton-transporting V-type ATPase- V1 domain",1]
["vacuolar transmembrane transport",2]
["vacuolar transport",32]
["vacuole",142]
["vacuole fusion",4]
["vacuole fusion- non-autophagic",4]
["vacuole inheritance",1]
["vacuole organization",27]
["vacuole-mitochondrion membrane contact site",1]
["valine biosynthetic process",2]
["valine metabolic process",2]
["valine-tRNA ligase activity",2]
["valyl-tRNA aminoacylation",2]
["vascular transport",2]
["vasculature development",3]
["vasculogenesis",1]
["VCP-NPL4-UFD1 AAA ATPase complex",1]
["VCP-NSFL1C complex",1]
["vegetative phase change",2]
["vegetative to reproductive phase transition of meristem",23]
["ventral spinal cord development",1]
["very long-chain fatty acid biosynthetic process",4]
["very long-chain fatty acid metabolic process",5]
["vesicle",121]
["vesicle budding from membrane",3]
["vesicle cargo loading",2]
["vesicle coat",5]
["vesicle docking",5]
["vesicle docking involved in exocytosis",2]
["vesicle fusion",9]
["vesicle fusion with Golgi apparatus",1]
["vesicle fusion with vacuole",1]
["vesicle localization",3]
["vesicle lumen",1]
["vesicle membrane",13]
["vesicle organization",17]
["vesicle targeting",2]
["vesicle tethering complex",15]
["vesicle-mediated transport",79]
["vesicle-mediated transport between endosomal compartments",3]
["vesicle-mediated transport in synapse",3]
["vesicle-mediated transport to the plasma membrane",7]
["violaxanthin de-epoxidase activity",1]
["viral gene expression",1]
["viral genome replication",2]
["viral life cycle",3]
["viral process",9]
["viral release from host cell",1]
["viral replication complex",1]
["viral RNA genome replication",1]
["viral translation",1]
["visual perception",1]
["vitamin B6 binding",6]
["vitamin B6 biosynthetic process",3]
["vitamin B6 metabolic process",3]
["vitamin binding",7]
["vitamin biosynthetic process",22]
["vitamin E biosynthetic process",4]
["vitamin E metabolic process",4]
["vitamin K biosynthetic process",1]
["vitamin K metabolic process",1]
["vitamin metabolic process",24]
["vitamin transmembrane transport",2]
["vitamin transmembrane transporter activity",2]
["vitamin transport",2]
["vitellogenesis",1]
["voltage-gated anion channel activity",3]
["voltage-gated cation channel activity",7]
["voltage-gated channel activity",10]
["voltage-gated chloride channel activity",2]
["voltage-gated ion channel activity",10]
["voltage-gated potassium channel activity",7]
["vulval development",1]
["water channel activity",1]
["water homeostasis",3]
["water transmembrane transporter activity",1]
["water transport",3]
["water-soluble vitamin biosynthetic process",17]
["water-soluble vitamin metabolic process",19]
["wax biosynthetic process",5]
["wax metabolic process",5]
["wing disc development",2]
["wing disc dorsal/ventral pattern formation",1]
["wing disc pattern formation",1]
["Wnt signaling pathway",2]
["wound healing",6]
["xanthophyll biosynthetic process",3]
["xanthophyll catabolic process",1]
["xanthophyll cycle",2]
["xanthophyll metabolic process",7]
["xenobiotic transmembrane transporter activity",16]
["XPC complex",2]
["xylan 1-4-beta-xylosidase activity",2]
["xylan acetylation",1]
["xylan biosynthetic process",4]
["xylan catabolic process",3]
["xylan metabolic process",7]
["xylanase activity",3]
["xylem and phloem pattern formation",12]
["xylem development",6]
["xylem vessel member cell differentiation",1]
["xylogalacturonan metabolic process",1]
["xyloglucan biosynthetic process",1]
["xyloglucan metabolic process",2]
["xylosyltransferase activity",4]
["xylulokinase activity",1]
["xylulose metabolic process",1]
["Y-form DNA binding",1]
["yeast-form cell wall",1]
["Z disc",1]
["zeaxanthin epoxidase [overall] activity",1]
["zeaxanthin epoxidase activity",1]
["zinc ion binding",30]
["zinc ion homeostasis",2]
["zinc ion transmembrane transport",3]
["zinc ion transmembrane transporter activity",3]
["zinc ion transport",4]
["zygote asymmetric cell division",2]
["zygote asymmetric cytokinesis in embryo sac",2]
["zymogen binding",1]

{"sheet":"Table_S10","index":9,"n_rows":55,"n_cols":10,"rows_kept":55}
["Supplementary Table 10 – Key gene families whose origins were further investigated"]
[]
["AT_code","Common_name","Type","Process","Function","Reference"]
["AT3G12280","RBR1","Retinoblastoma-related","alternation of generation","differentiation of male gametophyte cells","Ebel et al., 2004"]
["AT4G26080","ABI1","protein phosphatase 2C","stomatal closure","stomatal closure in response to ABA","Leung et al., 1997"]
["AT2G28260","CNGC15","cyclic nucleotide-gated chann","stomatal closure","stomatal closure in response to ABA","Wang et al., 2013"]
["AT5G37500","GORK","Shaker family","stomatal closure","tansporting pottasium, stomatal closure in response to ABA","Hosy et al., 2003"]
["AT1G62400","HT1","protein kinase","stomatal closure","stomatal closure in response to CO2","Hashimoto et al., 2006"]
["AT4G33950","OST1","SNRK2.6","stomatal closure","stomatal closure in response to ABA, inhibition of ligh-induced stomatal opening","Mustilli et al., 2002"]
["AT2G29940","PDR3","ABC transporter","stomatal closure","transporting ABA into guard cell to induce stomatal closure","Bates et al., 2012"]
["AT5G58140","PHOT2","photoreceptor","stomatal closure","stomatal opening in response ot blue light","Kinoshita et al., 2001"]
["AT5G53160","PYL8","Regulator component of ABA receptor","stomatal closure","Interacts with PP2c stimulating ABA induced stomatal closure","Lim et al., 2013"]
["AT1G12480","SLAC1","C4-dicarboxylate transporter/malic acide transport protein","stomatal closure","transporting anions, stomatal closure in response to CO2, ozone and ABA","Vahisalu et al., 2008"]
["AT4G03560","TPC1","Two-pore calcium channel","stomatal closure","stomatal closure in response to ABA","Peiter et al., 2005"]
["AT3G02850","SKOR","Shaker family","stomatal closure","tansporting pottasium, stomatal closure in response to ABA","Lacombe et al., 2000"]
["AT2G26330","ERECTA","Leucine-rich receptor-like protein kinase","stomatal development & vasculature","Regulates aerial architecture, including inflorescence and stomatal patterning.","Masle et al., 2005"]
["AT2G20875","EPF1","epidermal patterning factor","stomatal development","ensure correct spacing of guard cells","Hara et al., 2007"]
["AT4G12970","EPFL9","epidermal patterning factor-like","stomatal development","ensure correct spacing of guard cells","Sugano et al., 2010"]
["AT3G24140","FAMA","Basic-helix-loop-helix","stomatal development","prevent multiple divisions of meristimoid producng two guard cell, facilitare guard cell differentiation","Ohashi-Ito & Bergman, 2006"]
["AT3G06120","MUTE","Basic-helix-loop-helix","stomatal development","promote asymmetric division of MMC to produce meristimoid and SLGC.","Pillitteri et al., 2008"]
["AT3G26744","SCRM","Basic-helix-loop-helix","stomatal development","Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA","Kanaoka et al., 2008"]
["AT5G53210","SPCH","Basic-helix-loop-helix","stomatal development","promote entry of protodermal cell into GMC, and transition of GMC to MMC","Lampard et al., 2008"]
["AT1G80080","TMM","Leucine-rich repeat family protein","stomatal development","ensures correct asymmetric division of MMC to produce meristimoid and SLGC.","Yang & Sack, 1995"]
["AT1G63700","YODA","MAP KINASES","stomatal development","Key regulator of the stomatal devlopment pathway","Bergman et al., 2004"]
["AT3G18440","ALMT9","aluminum-activated malate transporter family","stomatal opening","mediates chloride accumulation in the vacuole, facilitation stomatal opening","De Angeli et al., 2013"]
["AT4G18950","BHP","Integrin-linked protein kinase family","stomatal opening","mediating blue light dependent stomatal opening","Hayashi et al., 2017"]
["AT4G14480","BLUS1","Ser/Thr protein kinase","stomatal opening","regulator of stomatal control to enhance photosynthetic CO2 assimilation under natural light conditions.","Takemiya et al., 2013"]
["AT1G08810","MYB60","putative transcription factor of the R2R3-MYB gene family","stomatal opening","transcription factor protomting stomatal opening in response to blue light","Ruscani et al., 2013"]
["AT3G45780","PHOT1","photoreceptor","stomatal opening","stomatal opening in response ot blue light","Kinoshita et al., 2001"]
["AT4G40100","PRSL1","GRAM domain family protein","stomatal opening","regulatory unit of PP1 and regulates blue light dependent stomatal opening","Takemiya et al., 2013"]
["AT1G19570","DHAR5","dehydroascorbate reductase","symbiosis","Fungal symbiosis","Vadassery et al., 2009"]
["AT2G33580","LYK5","LysM-containing receptor-like kinase","symbiosis","Fungal symbiosis","Cao et al., 2014"]
["AT1G21880","LYM1","Phosphatidylinositol 4-phosphate 5-kinase (PIP5K)","symbiosis","Fungal symbiosis","Gust et al., 2012"]
["AT3G09940","MDAR3","monodehydroascorbate reductase","symbiosis","Fungal symbiosis","Vadassery et al., 2009"]
["AT4G28950","ROP9","ROP GTPase","symbiosis","Fungal symbiosis","Delaux & Schomack, 2021"]
["AT5G20730","ARF7","Transcription factor B3 family","vasculature","lateral root formation","Okushima et al., 2007"]
["AT2G38120","AUX1","Auxin influx transporter","vasculature","lateral root formation","Bennet et al., 1996",{"$nulls":3}," "]
["AT1G33280","BEARSKIN1","NAC domain transcription factor","vasculature","root cap cell fate","Bennet et al., 2010"]
["AT1G04550","BODENLOS","AUX/IAA transcriptional regualtor family","vasculature","primary root formation","Hamman et al., 1999"]
["AT1G63650","EGL3","bHLH","vasculature","Root hair development, trichome development","Bernhardt et al., 2003"]
["AT1G79840","GL2","HD-Zip CLass IV","vasculature","Root hair development, trichome development","Masucci et al., 1996"]
["AT5G41315","GL3","HD-Zip CLass III","vasculature","Root hair development, trichome development","Bernhardt et al., 2003"]
["AT5G16560","KAN1","KANADI","vasculature","Promoting abaxial identity in both leaves and carpels","Wu et al., 2008"]
["AT1G32240","KAN2","KANADI","vasculature","Promoting abaxial identity in both leaves and carpels","Izhaki & Bowman, 2007"]
["AT5G42630","KAN4","KANADI","vasculature","pattern formation of organs","Izhaki & Bowman, 2007"]
["AT2G42430","LBD16","lateral organ boundaries-domain","vasculature","lateral root formation","Goh et a., 2012"]
["AT2G27230","Lonesome highway","bhlh","vasculature","production of stele cells, control of cell files in vasculature bundle","Ohashi-Ito & Bergman, 2007"]
["AT1G73590","PIN-FORMED","Auxin efflux carrier","vasculature","production of stele cells, control of cell files in vasculature bundle","Vernoux et al., 2000"]
["AT3G54220","SCR","GRAS family transcription factors","vasculature","radial organization of the root","Wysocka-Diller et al., 2000"]
["AT1G79580","SOMBRERO","NAC domain transcription factor","vasculature","root cap cell fate","Bennet et al., 2010"]
["AT1G62360","STM","KNOX homebox transcription factor","vasculature","shoot apical meritstem formation","Long et al., 1996"]
["AT3G25710","TMO5","bhlh","vasculature","root initiatiion, control of cell files in vasculature bundle","Ohashi-Ito, et al., 2019"]
["AT5G23520","TTG1","WD40 repeat-like","vasculature","Root hair development, trichome development","Walker et al., 1999"]
["AT5G14750","WER","MYB","vasculature","Root hair development","Lee & Schiefelbein, 1999"]
["AT1G46480","WOX4","WUSCHEL-related homeobox","vasculature","maintenance of the vasculature meristem","Ji et al., 2010"]

{"sheet":"Table_S11","index":10,"n_rows":8,"n_cols":5,"rows_kept":8,"merged":[[0,0,0,12],[1,9,1,12]]}
["Supplementary Table 11 - Losses inferred along branches within bryophytes. The number of losses among the major bryophyte lineages was inferred under competing topologies. For the focal analysis, losses were inferred for monophyletic bryophytes with algal outgroups present. Loss inferences for the three branches in the 95% credible region from the outgroup-free rooting analysis are also presented. All analyses recovered extensive gene loss within bryophytes, although the number of losses varied depending on the root position and, for monophyletic bryophytes, on whether the algal outgroup was included. Inferred losses for bryophytes are generally higher in the presence of the outgroup, likely because the inclusion of algae helps to distinguish secondary losses from scenarios in which some bryophytes never possessed a given gene family."]
[null,"Monophyletic Bryophytes (+ Algae)","Hornworts Basal","Moss Basal","Monophyletic Bryophytes (No Algae)"]
["Branch","Losses","Losses","Losses","Losses"]
["Liverworts",3444.13,1960.82,2534,1967.41]
["Hornworts",3738.72,2152.45,3503.86,2677.68]
["Mosses",1311.85,1366.88,1509.02,1353.63]
["Setaphyta",692.72,1160.24,"NA",437.55]
["Bryophyta",1326.12,"NA","NA",698.77]

{"sheet":"Table_S12","index":11,"n_rows":180,"n_cols":6,"rows_kept":180,"merged":[[0,0,0,5]]}
["Supplementary Table 12 – Transcriptomic Dataset for Phylogenetic Analyses. "]
[]
["Species","Group","Data_type","Source ","Reference ","Fraction_missing "]
["Cystodium sorbifolium","fern","Transcriptome","NCBI","Qi et al., 2020",0.186]
["Dennstaedtia hirsuta","fern","Transcriptome","NCBI","Qi et al., 2020",0.176]
["Folioceros","hornwort","Transcriptome","NCBI","You et al., 2017",0.148]
["Lindsaea heterophylla","fern","Transcriptome","NCBI","Qi et al., 2020",0.167]
["Lindsaea microphylla","fern","Transcriptome","NCBI","Qi et al., 2020",0.376]
["Saccoloma campylurum","fern","Transcriptome","NCBI","Qi et al., 2020",0.214]
["Treubia lacunosa","liverwort","Transcriptome","NCBI","Dong et al., 2019",0.174]
["Amborella trichopoda","angiosperm","genome","NCBI","Soltis et al., 2008",0.007]
["Arabidopsis thaliana","angiosperm","genome","NCBI","Mienke et al., 1998",0.003]
["Chara braunii","algae ","genome","NCBI","Nishiyama et al., 2018",0.278]
["Chlorella sorokiniana","algae ","genome","NCBI","Arriola et al., 2018",0.077]
["Klebsormidium nitens","algae ","genome","NCBI","Hori et al., 2014",0.03]
["Klebsormidium subtile","algae ","genome","NCBI","Hori et al., 2014",0.553]
["Marchantia polymorpha","liverwort","genome","NCBI","Bowman et al., 2017",0.033]
["Physcomicromitrium patens","moss","genome","NCBI","Rensing et al., 2008",0.017]
["Vitis vinifera","angiosperm","genome","NCBI","Jaillon et al., 2007",0.003]
["Zea mays","angiosperm","genome","NCBI","Jiao et al., 2017",0.024]
["Zostera marina","angiosperm","genome","NCBI","Olsen et al., 2016",0.03]
["Oryza sativa Japonica Group","angiosperm","genome","NCBI","Goff et al., 2002",0]
["Anthoceros agrestis","hornwort","genome","https://www.hornworts.uzh.ch/en/download.html","Li et al., 2020",0.106]
["Anthoceros punctatus","hornwort","genome","https://www.hornworts.uzh.ch/en/download.html","Li et al., 2020",0.153]
["Acorus americanus","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.414]
["Adiantum aleuticum","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.412]
["Adiantum tenerum","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.16]
["Allamanda cathartica","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.466]
["Anomodon attenuatus","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.299]
["Atrichum angustatum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.316]
["Barbilophozia barbata","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.454]
["Bazzania trilobata","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.384]
["Boehmeria nivea","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.628]
["Brachypodium distachyon","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0]
["Bryum argenteum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.426]
["Buxbaumia aphylla","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.266]
["Calypogeia fissa","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.539]
["Carica papaya","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.167]
["Catharanthus roseus","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.277]
["Cedrus libani","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.539]
["Ceratodon purpureus","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.334]
["Chaetosphaeridium globosum","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.603]
["Chara vulgaris","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.732]
["Chlorella variabilis","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.156]
["Colchicum autumnale","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.403]
["Coleochaete irregularis","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.224]
["Coleochaete scutata","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.442]
["Conocephalum conicum","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.225]
["Cunninghamia lanceolata","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.144]
["Cyathea spinulosa","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.541]
["Cycas micholitzii","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.39]
["Cylindrocystis cushleckae","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.264]
["Cystopteris fragilis","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.134]
["Cystopteris utahensis","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.456]
["Danaea nodosa","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.156]
["Dendrolycopodium obscurum","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.423]
["Didymochlaena truncatula","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.661]
["Dioscorea villosa","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.367]
["Diospyros malabarica","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.125]
["Diphyscium foliosum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.259]
["Dipteris conjugata","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.276]
["Entransia fimbriat","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.334]
["Ephedra sinica","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.756]
["Equisetum diffusum","equisetum","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.532]
["Equisetum hymale","equisetum","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.332]
["Eschscholzia californica","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.089]
["Frullania","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.436]
["Funaria","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.473]
["Ginkgo biloba","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.592]
["Gnetum montanum","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.285]
["Gymnocarpium dryopteris","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.379]
["Hedwigia ciliata","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.181]
["Hibiscus cannabinus","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.461]
["Homalosorus pycnocarpos","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.405]
["Houttuynia cordata","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.435]
["Huperzia lucidula","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.31]
["Huperzia myrisinites","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.458]
["Huperzia selago","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.301]
["Huperzia squarrosa","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.546]
["Illicium floridanum","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.188]
["Illicium parviflorum","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.88]
["Inula helenium","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.423]
["Ipomoea purpurea","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.149]
["Isoetes sp","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.315]
["Juniperus scopulorum","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.529]
["Kadsura heteroclite","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.583]
["Kochia scoparia","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.388]
["Larrea tridentata","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.492]
["Lejeuneaceae sp","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.205]
["Leucodon sciuroides","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.16]
["Lunularia cruciata","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.191]
["Lupinus angustifolius","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.341]
["Lupinus polyphyllus","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.729]
["Lycopodium annotinum","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.379]
["Lycopodium deuterodensum","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.324]
["Marattia attenuata","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.389]
["Marchantia emarginata","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.633]
["Marchantia paleacea","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.12]
["Megaceros tosanus","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.303]
["Megaceros vincentianus","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.369]
["Mesostigma viride","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.629]
["Mesotaenium endlicherianum","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.327]
["Metzgeria crassipilis","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.343]
["Monomastix opisthostigma","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.541]
["Mougeotia sp","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.313]
["Neckera douglasii","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.176]
["Nelumbo nucifera","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.007]
["Nephroselmis pyriformis","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.532]
["Netrium digitus","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.511]
["Nothoceros aenigmaticus","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.647]
["Nuphar advena","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.642]
["Odontoschisma prostratum","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.367]
["Oenothera rosea","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.198]
["Oenothera speciosa","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.292]
["Ophioglossum vulgatum","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.647]
["Pallavicinia lyellii","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.323]
["Paraphymatoceros hallii","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.289]
["Pellia Epiphylla","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.273]
["Pellia neesiana","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.249]
["Penium margaritaceum","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.677]
["Persea borbonia","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.644]
["Phaeoceros carolinianus","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.24]
["Phaeomegaceros coriaceus","hornwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.282]
["Physcomicromitrium sp","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.233]
["Pinus jeffreyi","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.151]
["Pinus parviflora","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.174]
["Pinus ponderosa","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.143]
["Pinus radiata","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.11]
["Podophyllum peltatum","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.303]
["Polystichum acrostichoides","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.447]
["Polytrichum commune","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.497]
["Populus euphratica","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.005]
["Populus trichocarpa","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.002]
["Porella navicularis","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.186]
["Porella pinnata","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.386]
["Prumnopitys andina","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.278]
["Pseudolycopodiella caroliniana","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.344]
["Psilotum nudum","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.437]
["Pteris ensigormis","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.48]
["Pteris vittata","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.24]
["Ptilidium pulcherrimum","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.405]
["Pyramimonas parkeae","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.511]
["Radula lindenbergia","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.223]
["Rhynchostegium serrulatum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.287]
["Riccia berychiana","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.31]
["Rosa chinensis","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.004]
["Rosmarinus officinalis","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.463]
["Roya obtusa","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.426]
["Sabal bermudana","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.437]
["Sarcandra glabra","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.363]
["Saruma henryi","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.207]
["Scapania nemorosa","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.172]
["Sceptridium dissectum","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.209]
["Schistochila sp","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.28]
["Sciadopitys verticillata","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.228]
["Selaginella apoda","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.39]
["Selaginella kraussiana","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.285]
["Selaginella selaginoides","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.478]
["Selaginella wallacei","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.33]
["Selaginella willdenowii","lycophyte","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.369]
["Smilax bona nox","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.517]
["Solanum tuberosum","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.01]
["Sorghum bicolor","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0]
["Sphaerocarpos texanus","liverwort","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.405]
["Sphagnum lescurii","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.393]
["Sphagnum recurvatum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.341]
["Spirogyra sp","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.609]
["Spirotaenia minuta","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.596]
["Takakia lepidozioides","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.263]
["Tanacetum parthenium","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.282]
["Taxus baccata","gymnosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.327]
["Tetraphis pellucida","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.332]
["Thelypteris acuminata","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.522]
["Thuidium delicatulum","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.475]
["Thyrsopteris elegans","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.445]
["Timmia austriaca","moss","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.277]
["Uronema belka","algae ","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.497]
["Yucca filamentosa","angiosperm","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.368]
["Lindsaea linearis","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.266]
["Lonchitis hirsuta","fern","transcriptome","1KP_project","Leebens-Mack et al., 2019",0.215]

{"sheet":"Table_S13","index":12,"n_rows":62,"n_cols":6,"rows_kept":62,"merged":[[0,0,0,5]]}
["Supplementary Table 13 – Genomic Dataset for ALE Analysis "]
[]
["Species","Group","Data_type","Source ","Reference","Fraction_missing"]
["Chlorokybus atmophyticus","algae","genome","GenBank","Wang et al. 2020",0.207]
["Chara braunii","algae ","genome","NCBI","Nishiyama et al., 2018",0.278]
["Amborella trichopoda","angiosperm","genome","EnsemblPlants","Amborella Genome Project 2013 Science",0.007]
["Arabidopsis thaliana","angiosperm","genome","Araport 11","Cheng et al., 2017",0]
["Brachypodium distrachyon","angiosperm","genome","Phytozome","Vogel et al. 2010",0.004]
["Cinnamomum","angiosperm","genome","GenBank","Chaw et al., 2019",0.075]
["Dioscorea alata","angiosperm","genome","Phytozome","Sugihara et al. 2020",0.217]
["Kalanchoe fedtschenkoi","angiosperm","genome","Phytozome","Yang et al., 2017",0.05]
["Magnolia biondii","angiosperm","genome","Dryad (https://doi.org/10.5061/dryad.s4mw6m947)","Dong et al., 2021",0.25]
["Nymphaea colorata","angiosperm","genome","http://waterlily.eplant.org","Zhang et al., 2020 ",0.012]
["Klebsormidium flaccidum","charophyta","genome","GenBank","Hori et al., 2014",0.03]
["Mesotaenium endlicherianum","charophyta","genome","GenBank","Cheng et al., 2019",0.287]
["Spirogloea musicola","charophyta","genome","GenBank","Cheng et al., 2019",0.153]
["Azolla filiculoides","fern","genome","FernBase","Li et al., 2018",0.171]
["Salvinia cucullata","fern","genome","FernBase","Li et al., 2018 ",0.163]
["Ginkgo biloba","gymnosperm","genome","Giga DB","Guan et al., 2019 ",0.385]
["Gnetum montanum","gymnosperm","genome","Dryad","Wan et al., 2018",0.094]
["Pinus lambertiana","gymnosperm","genome","TreeGenesDB","Stevens et al., 2016 ",0.16]
["Pseudotsuga menziesii","gymnosperm","genome","TreeGenesDB","Neale et al., 2017 ",0.242]
["Anthoceros agrestis","hornwort","genome","https://www.hornworts.uzh.ch/en/download.html","Li et al., 2020",0.106]
["Anthoceros punctatus","hornwort","genome","https://www.hornworts.uzh.ch/en/download.html","Li et al., 2020",0.153]
["Marchantia polymorpha","liverwort","genome","NCBI","Bowman et al., 2017",0.033]
["Marchantia polymorpha ruderalis","liverwort","genome","https://www.uniprot.org/proteomes/UP000077202","Honkanen et al., 2016",0.087]
["Selaginella lepidophylla","lycophyte","genome","GenBank","VanBuren et al., 2018 ",0.113]
["Selaginella moellendorfii","lycophyte","genome","RefSeq","Banks et al., 2011",0.139]
["Ceratodon purpureus","moss","genome","Phytozome","Carey et al., 2020 ",0.029]
["Ceratophyllum demursum","moss","genome","CoGe ","Yang et al., 2020",0.16]
["Fontinalis antipyretica","moss","genome","GigaScience GigaDB","Yu et al., 2020 ",0.092]
["Physcomitrium patens","moss","genome","NCBI","Rensing et al., 2008",0.017]
["Syntrichia","moss","genome","Cyverse CoGe","Silva et al., 2020",0.106]
[]
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{"sheet":"Table_S14","index":13,"n_rows":8,"n_cols":10,"rows_kept":8}
["Supplementary Table 14 - Dating analyses of major lineages under alternative topologies"]
["Tracheophytes","Mean","Min","Max","Mean","Min","Max","Mean","Min","Max"]
["Embryophytes",499.5,479,514,501.6,484,515,502.5,485,517]
["Bryophytes",454.5,436,475,"NA","NA","NA","NA","NA","NA"]
["Setaphytes",419.6,389,440,431.7,399,457,"NA","NA","NA"]
["Tracheophytes",447.5,438,452,446.07,433,452,444,429,451]
["Euphyllophytes",412.34,397,425,410.2,395,424,407.7,392,421]
["Spermatophytes",348.4,334,363,349.2,335,363,348,334,361]