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{"sheet":"Description","index":0,"n_rows":35,"n_cols":2,"rows_kept":35}
[]
["Supplementary Data 4. Processed read counts, gene essentiality classification and conditional essentiality for phage T4"]
[]
["Tab","Description"]
["Data S1: List of T4 HIDEN-SEQ libraries ","List of all T4 phage HIDEN-SEQ libraries generated as part of this work"]
["Data S2: T4_transposition_sample_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - T4 input reference HIDEN-SEQ library collected before CRISPR-Cas13a selection "]
["Data S3: T4_REF_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - T4 reference HIDEN-SEQ library"]
["Data S4: T4_REF_essentiality","Gene essentiality of T4 reference HIDEN-SEQ library"]
["Data S5: T4_terminator_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - T4 HIDEN-SEQ library with transposon carrying a transcriptional terminator"]
["Data S6: T4_ΔrnlA_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - T4_ΔrnlA HIDEN-SEQ library "]
["Data S7: T4_Control_RexAB_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S8: T4_RexAB_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S9: T4_Control_RnlAB_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S10: T4_RnlAB_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S11: T4_Control_CBASS_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S12: T4_CBASS_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S13: T4_Control_DarTG1_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S14: T4_DarTG1_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S15: T4_Control_DarTG2_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S16: T4_DarTG2_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S17: T4_K-12_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S18: T4_M9_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S19: T4_CFE299_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S20: T4_CFE331_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S21: T4_K-12_ΔRM_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S22: T4_Mokosh_type_I_counts","Read counts of transposon insertions at individual TA dinucleotides sites in T4 genome - Competitive fitness assay experiment"]
["Data S23: resampling_T4_REF_vs_T4_ΔrnlA","The resampling output for conditional essentiality T4 reference HIDEN-SEQ library versus T4_ΔrnlA HIDEN-SEQ library - Comparison between independently generated T4 libraries"]
["Data S24: resampling_Control_vs_RexAB","The resampling output for conditional essentiality control versus RexAB - Competitive fitness assay experiment"]
["Data S25: resampling_Control_vs_RnlAB","The resampling output for conditional essentiality control versus RnlAB - Competitive fitness assay experiment"]
["Data S26: resampling_Control_vs_DarTG1","The resampling output for conditional essentiality control versus DarTG1 - Competitive fitness assay experiment"]
["Data S27: resampling_Control_vs_DarTG2","The resampling output for conditional essentiality control versus DarTG2 - Competitive fitness assay experiment"]
["Data S28: resampling_LB_vs_M9","The resampling output for conditional essentiality K-12 LB medium versus K-12 M9 medium - Competitive fitness assay experiment"]
["Data S29: resampling_K-12_vs_CFE299","The resampling output for conditional essentiality K-12 versus CFE299 - Competitive fitness assay experiment"]
["Data S30: resampling_K-12_vs_CFE331","The resampling output for conditional essentiality K-12 versus CFE331- Competitive fitness assay experiment"]
["Data S31: resampling_K-12_ΔRM_vs_Mokosh_type_I","The resampling output for conditional essentiality K-12 ΔRM versus Mokosh type I - Competitive fitness assay experiment"]

{"sheet":"Data S1","index":1,"n_rows":24,"n_cols":5,"rows_kept":24}
[]
["List of T4 HIDEN-SEQ libraries"]
[]
["library","condition","description","internal sample ID","accession "]
["T4_transposition_sample","solid, LB medium, 37⁰C","T4 input reference HIDEN-SEQ library collected directly after the transposition step","T4_Tn","SRR38171766"]
["T4_REF","solid, LB medium, 37⁰C","T4 reference HIDEN-SEQ library","Lib_5A","SRR38171765"]
["T4_terminator","solid, LB medium, 37⁰C","T4 HIDEN-SEQ library constructed with transposon donor carrying a transcriptional terminator","T4_Acr1_v3","SRR38171754"]
["T4_ΔrnlA","solid, LB medium, 37⁰C","T4 HIDEN-SEQ library constructed on the E. coli ΔrnlA strain from the Keio collection to test the conditional essentiality of dmd gene ","JR_1","SRR38171743"]
["T4_Control_RexAB","liquid, LB medium, 37⁰C","Control: Infection of E. coli K-12 BW25113 strain carrying an empty vector with T4 reference HIDEN-SEQ library - Competitive fitness assay ","E1","SRR38171737"]
["T4_RexAB","liquid, LB medium, 37⁰C","Infection of E. coli K-12 BW25113 strain expressing RexAB from a plasmid with T4 reference HIDEN-SEQ library - Competitive fitness assay ","Rex1","SRR38171736"]
["T4_Control_RnlAB","liquid, LB medium, 37⁰C","Control: Infection of  E. coli ΔrnlA strain from the Keio collection with T4_ΔrnlA HIDEN-SEQ library - Competitive fitness assay ","T4_delrnlA","SRR38171735"]
["T4_RnlAB","liquid, LB medium, 37⁰C","Infection of E. coli K-12 BW25113 strain with T4_ΔrnlA HIDEN-SEQ library - Competitive fitness assay ","T4_BW_2","SRR38171734"]
["T4_Control_CBASS","liquid, LB medium, 0.2% arabinose, 37⁰C","Control: Infection of E. coli K-12 BW25113 strain carrying an empty vector with T4 reference HIDEN-SEQ library - Competitive fitness assay ",352,"SRR38171733"]
["T4_CBASS","liquid, LB medium, 0.2% arabinose, 37⁰C","Infection of E. coli K-12 BW25113 strain expressing CBASS from a plasmid with T4 reference HIDEN-SEQ library - Competitive fitness assay ",351,"SRR38171732"]
["T4_Control_DarTG1","liquid, LB medium, 37⁰C","Control: Infection of E. coli K-12 BW25113 strain carrying an empty vector with T4 reference HIDEN-SEQ library - Competitive fitness assay ","LB_EV","SRR38171764"]
["T4_DarTG1","liquid, LB medium, 37⁰C","Infection of E. coli K-12 BW25113 strain expressing DarTG1 from a plasmid with T4 reference HIDEN-SEQ library - Competitive fitness assay ","darTG1","SRR38171763"]
["T4_Control_DarTG2","liquid, M9Glc medium, 30⁰C","Control: Infection of E. coli K-12 BW25113 strain carrying an empty vector with T4 reference HIDEN-SEQ library - Competitive fitness assay ","M9_EV","SRR38171762"]
["T4_DarTG2","liquid, M9Glc medium, 30⁰C","Infection of E. coli K-12 BW25113 strain expressing DarTG2 from a plasmid with T4 reference HIDEN-SEQ library - Competitive fitness assay ","darTG2","SRR38171761"]
["T4_K-12","liquid, LB medium, 37⁰C","Control: Infection of E. coli K-12 BW25113 strain with T4 reference HIDEN-SEQ library - Competitive fitness assay ","LB_2","SRR38171760"]
["T4_M9","liquid, M9Glc medium, 37⁰C","Infection of E. coli K-12 BW25113 strain with T4 reference HIDEN-SEQ library - Competitive fitness assay ","M9_1","SRR38171759"]
["T4_CFE299","liquid, LB medium, 37⁰C","Infection of E. coli CFE299 clinical strain with T4 reference HIDEN-SEQ library - Competitive fitness assay ","T4_299","SRR38171758"]
["T4_CFE331","liquid, LB medium, 37⁰C","Infection of E. coli CFE331 clinical strain with T4 reference HIDEN-SEQ library - Competitive fitness assay ","T4_331","SRR38171757"]
["T4_K-12_ΔRM ","liquid, LB medium, 37⁰C","Control: Infection of E. coli K-12 MG1655 ΔRM strain with T4 reference HIDEN-SEQ library - Competitive fitness assay ","T4_RM_37","SRR38171756"]
["T4_Mokosh_type_I","liquid, LB medium, 37⁰C","Infection of E. coli K-12 MG1655 ΔRM strain expressing CFE331_Mokosh_type_I with T4 reference HIDEN-SEQ library - Competitive fitness assay ","T4_Mok","SRR38171755"]

{"sheet":"Data S2","index":2,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_transposition_sample_counts"]
[]
["#Generated by tpp from T4_Tn_merged_libab_fastp.fastq, chrom=Escherichia_virus_T4D"]
["TA_sites: 14,474\nTAs_hit: 14,075\ndensity: 0.972"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count"]
["ID=gene-16","+",15,52,0,52]
["ID=gene-16","+",17,24,0,24]
["ID=gene-16","+",29,12,0,12]
["ID=gene-16","+",33,23,0,23]
["ID=gene-16","+",76,0,0,0]
["ID=gene-16","+",92,18,0,18]
["ID=gene-16","+",95,13,0,13]
["ID=gene-16","+",102,0,0,0]
["ID=gene-16","+",123,3,0,3]
["ID=gene-16","+",134,12,10,22]
["ID=gene-16","+",145,0,0,0]
["ID=gene-16","+",152,24,15,39]
["ID=gene-16","+",165,0,0,0]
["ID=gene-16","+",188,1,0,1]
["ID=gene-16","+",254,36,3,39]
["ID=gene-16","+",267,5,0,5]
["ID=gene-16","+",282,1,4,5]
["ID=gene-16","+",299,8,2,10]
["ID=gene-16","+",312,0,2,2]
["ID=gene-16","+",318,0,13,13]
["ID=gene-16","+",330,16,22,38]
["ID=gene-16","+",366,14,0,14]
["ID=gene-16","+",381,0,2,2]
["ID=gene-16","+",398,12,1,13]
["ID=gene-16","+",422,43,0,43]
["ID=gene-16","+",445,0,10,10]
["ID=gene-16","+",476,0,10,10]
["ID=gene-16,ID=gene-17","+",493,1,3,4]
["ID=gene-17","+",498,13,26,39]
["ID=gene-17","+",501,4,10,14]
["ID=gene-17","+",519,3,1,4]
["ID=gene-17","+",540,0,0,0]
["ID=gene-17","+",543,10,0,10]
["ID=gene-17","+",558,0,14,14]
["ID=gene-17","+",594,6,0,6]
["ID=gene-17","+",620,13,0,13]
["ID=gene-17","+",641,0,13,13]
["ID=gene-17","+",651,7,7,14]
["ID=gene-17","+",660,14,14,28]
["ID=gene-17","+",663,0,3,3]
["ID=gene-17","+",685,3,1,4]
["ID=gene-17","+",696,9,2,11]
["ID=gene-17","+",707,24,18,42]
["ID=gene-17","+",709,0,4,4]
["ID=gene-17","+",715,25,3,28]
["ID=gene-17","+",721,18,0,18]
["ID=gene-17","+",724,1,6,7]
["ID=gene-17","+",737,6,33,39]
["ID=gene-17","+",739,21,2,23]
["ID=gene-17","+",751,2,2,4]
["ID=gene-17","+",766,10,9,19]
["ID=gene-17","+",769,6,1,7]
["ID=gene-17","+",772,12,10,22]
["ID=gene-17","+",826,10,10,20]
["ID=gene-17","+",833,9,9,18]
["ID=gene-17","+",848,6,2,8]
["ID=gene-17","+",859,0,7,7]
["ID=gene-17","+",865,4,4,8]
["ID=gene-17","+",872,4,12,16]
["ID=gene-17","+",882,0,0,0]
["ID=gene-17","+",894,2,1,3]
["ID=gene-17","+",902,6,3,9]
["ID=gene-17","+",913,1,3,4]
["ID=gene-17","+",924,0,1,1]
["ID=gene-17","+",934,0,0,0]
["ID=gene-17","+",940,0,0,0]
["ID=gene-17","+",952,23,31,54]
["ID=gene-17","+",957,15,0,15]
["ID=gene-17","+",973,1,6,7]
["ID=gene-17","+",984,15,13,28]
["ID=gene-17","+",987,42,33,75]
["ID=gene-17","+",991,17,12,29]
["ID=gene-17","+",1011,0,5,5]
["ID=gene-17","+",1018,1,0,1]
["ID=gene-17","+",1027,17,2,19]
["ID=gene-17","+",1035,4,9,13]
["ID=gene-17","+",1039,13,29,42]
["ID=gene-17","+",1077,0,9,9]
["ID=gene-17","+",1084,2,7,9]
["ID=gene-17","+",1087,32,56,88]
["ID=gene-17","+",1119,22,0,22]
["ID=gene-17","+",1144,1,0,1]
["ID=gene-17","+",1161,55,74,129]
["ID=gene-17","+",1165,36,52,88]
["ID=gene-17","+",1187,0,0,0]
["ID=gene-17","+",1216,4,0,4]
["ID=gene-17","+",1235,17,11,28]
["ID=gene-17","+",1255,5,1,6]
["ID=gene-17","+",1285,29,39,68]
["ID=gene-17","+",1296,2,0,2]
["ID=gene-17","+",1324,2,0,2]
["ID=gene-17","+",1327,9,0,9]
["ID=gene-17","+",1330,13,21,34]
["ID=gene-17","+",1333,2,3,5]
["ID=gene-17","+",1342,6,10,16]
["ID=gene-17","+",1350,15,1,16]
["ID=gene-17","+",1361,1,0,1]
["ID=gene-17","+",1366,24,17,41]
["ID=gene-17","+",1390,1,14,15]
["ID=gene-17","+",1409,16,15,31]
["ID=gene-17","+",1411,150,120,270]
["ID=gene-17","+",1417,26,38,64]
["ID=gene-17","+",1432,0,4,4]
["ID=gene-17","+",1445,0,0,0]
["ID=gene-17","+",1447,1,0,1]
["ID=gene-17","+",1459,14,0,14]
["ID=gene-17","+",1488,22,2,24]
["ID=gene-17","+",1498,3,0,3]
["ID=gene-17","+",1512,6,14,20]
["ID=gene-17","+",1534,4,11,15]
["ID=gene-17","+",1561,2,3,5]
["ID=gene-17","+",1566,5,0,5]
["ID=gene-17","+",1584,9,7,16]
["ID=gene-17","+",1591,0,0,0]
["ID=gene-17","+",1600,7,16,23]
["ID=gene-17","+",1608,11,7,18]
["ID=gene-17","+",1639,0,1,1]
["ID=gene-17","+",1657,18,7,25]
["ID=gene-17","+",1664,15,2,17]
["ID=gene-17","+",1666,9,1,10]
["ID=gene-17","+",1677,19,7,26]
["ID=gene-17","+",1706,2,20,22]
["ID=gene-17","+",1720,4,2,6]
["ID=gene-17","+",1723,24,1,25]
["ID=gene-17","+",1732,7,2,9]
["ID=gene-17","+",1777,18,8,26]
["ID=gene-17","+",1788,7,8,15]
["ID=gene-17","+",1794,14,3,17]
["ID=gene-17","+",1807,0,0,0]
["ID=gene-17","+",1814,0,4,4]
["ID=gene-17","+",1818,11,9,20]
["ID=gene-17","+",1821,19,10,29]
["ID=gene-17","+",1826,60,11,71]
["ID=gene-17","+",1844,36,15,51]
["ID=gene-17","+",1846,10,3,13]
["ID=gene-17","+",1854,38,19,57]
["ID=gene-17","+",1858,16,22,38]
["ID=gene-17","+",1861,15,20,35]
["ID=gene-17","+",1889,7,1,8]
["ID=gene-17","+",1891,0,0,0]
["ID=gene-17","+",1899,0,15,15]
["ID=gene-17","+",1904,1,2,3]
["ID=gene-17","+",1915,6,10,16]
["ID=gene-17","+",1928,23,11,34]
["ID=gene-17","+",1930,17,8,25]
["ID=gene-17","+",1938,1,22,23]
["ID=gene-17","+",1954,3,3,6]
["ID=gene-17","+",1971,5,7,12]
["ID=gene-17","+",1986,3,0,3]
["ID=gene-17","+",1996,0,5,5]
["ID=gene-17","+",2008,0,7,7]
["ID=gene-17","+",2014,9,24,33]
["ID=gene-17","+",2017,9,5,14]
["ID=gene-17","+",2035,0,0,0]
["ID=gene-17","+",2047,8,0,8]
["ID=gene-17","+",2056,0,0,0]
["ID=gene-17","+",2093,9,19,28]
["ID=gene-17","+",2106,5,9,14]
["ID=gene-17","+",2109,5,7,12]
["ID=gene-17","+",2118,0,4,4]
["ID=gene-17","+",2136,1,5,6]
["ID=gene-17","+",2155,0,0,0]
["ID=gene-17","+",2162,3,1,4]
["ID=gene-17","+",2170,7,0,7]
["ID=gene-17","+",2187,8,0,8]
["ID=gene-17","+",2199,9,0,9]
["ID=gene-17","+",2221,0,2,2]
["ID=gene-17","+",2234,0,0,0]
["ID=gene-17","+",2245,13,7,20]
["ID=gene-17","+",2247,57,37,94]
["ID=gene-17","+",2276,43,18,61]
["ID=gene-17","+",2286,17,39,56]
["ID=gene-17","+",2296,36,44,80]
["ID=gene-17","+",2307,20,21,41]
["ID=gene-17","+",2309,68,59,127]
[null,{"$error":"#N/A"},2313,45,14,59]
[null,{"$error":"#N/A"},2315,27,12,39]
[null,{"$error":"#N/A"},2318,9,2,11]
[null,{"$error":"#N/A"},2325,3,3,6]
[null,{"$error":"#N/A"},2328,0,0,0]
[null,{"$error":"#N/A"},2338,32,0,32]
["ID=gene-18","+",2350,6,10,16]
["ID=gene-18","+",2353,42,35,77]
["ID=gene-18","+",2381,8,7,15]
["ID=gene-18","+",2398,56,30,86]
["ID=gene-18","+",2402,52,14,66]
["ID=gene-18","+",2405,98,25,123]
["ID=gene-18","+",2411,25,4,29]
["ID=gene-18","+",2417,71,37,108]
["ID=gene-18","+",2435,13,18,31]
["ID=gene-18","+",2465,39,12,51]
["ID=gene-18","+",2474,43,30,73]
["ID=gene-18","+",2485,23,34,57]
["ID=gene-18","+",2491,55,63,118]
["ID=gene-18","+",2495,30,6,36]
["ID=gene-18","+",2498,43,15,58]
["ID=gene-18","+",2532,40,42,82]
["ID=gene-18","+",2537,36,10,46]
["ID=gene-18","+",2562,0,1,1]
["ID=gene-18","+",2575,6,13,19]
["ID=gene-18","+",2581,27,11,38]
["ID=gene-18","+",2597,40,35,75]
["ID=gene-18","+",2603,29,35,64]
["ID=gene-18","+",2609,9,0,9]
["ID=gene-18","+",2633,54,54,108]
["ID=gene-18","+",2636,29,58,87]
["ID=gene-18","+",2643,45,15,60]
["ID=gene-18","+",2654,8,13,21]
["ID=gene-18","+",2663,87,97,184]
["ID=gene-18","+",2666,90,39,129]
["ID=gene-18","+",2670,23,12,35]
["ID=gene-18","+",2684,1,14,15]
["ID=gene-18","+",2700,55,55,110]
["ID=gene-18","+",2714,17,26,43]
["ID=gene-18","+",2729,2,21,23]
["ID=gene-18","+",2735,16,1,17]
["ID=gene-18","+",2743,4,37,41]
["ID=gene-18","+",2762,0,0,0]
["ID=gene-18","+",2771,6,2,8]
["ID=gene-18","+",2774,4,12,16]
["ID=gene-18","+",2780,30,15,45]
["ID=gene-18","+",2792,6,1,7]
["ID=gene-18","+",2798,22,17,39]
["ID=gene-18","+",2820,16,49,65]
["ID=gene-18","+",2830,44,26,70]
["ID=gene-18","+",2837,8,27,35]
["ID=gene-18","+",2875,21,63,84]
["ID=gene-18","+",2884,53,66,119]
["ID=gene-18","+",2887,91,27,118]
["ID=gene-18","+",2903,17,8,25]
["ID=gene-18","+",2906,14,14,28]
["ID=gene-18","+",2918,2,49,51]
["ID=gene-18","+",2923,70,50,120]
["ID=gene-18","+",2926,6,16,22]
["ID=gene-18","+",2954,33,31,64]
["ID=gene-18","+",2984,0,0,0]
["ID=gene-18","+",2991,2,0,2]
["ID=gene-18","+",3007,15,98,113]
["ID=gene-18","+",3010,23,33,56]
["ID=gene-18","+",3018,2,13,15]
["ID=gene-18","+",3031,3,2,5]
["ID=gene-18","+",3038,1,4,5]
["ID=gene-18","+",3058,15,5,20]
["ID=gene-18","+",3062,23,19,42]
["ID=gene-18","+",3072,0,24,24]
["ID=gene-18","+",3094,5,2,7]
["ID=gene-18","+",3105,17,16,33]
["ID=gene-18","+",3119,18,46,64]
["ID=gene-18","+",3131,13,26,39]
["ID=gene-18","+",3137,45,23,68]
["ID=gene-18","+",3153,10,6,16]
["ID=gene-18","+",3177,12,25,37]
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{"sheet":"Data S3","index":3,"n_rows":14481,"n_cols":6,"rows_kept":14481}
[]
["T4_REF_counts"]
[]
["#Generated by tpp from Lib_5A_001_fastp_subsampled_s12.fastq, chrom=Escherichia_virus_T4D"]
["TA_sites: 14,474\nTAs_hit: 8,375\ndensity: 0.579"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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["ID=gene-wac","+",165908,0,0,0]
["ID=gene-wac","+",165943,0,0,0]
["ID=gene-wac","+",165956,0,0,0]
["ID=gene-wac","+",165986,0,0,0]
["ID=gene-wac","+",166003,0,0,0]
["ID=gene-wac","+",166009,0,0,0]
["ID=gene-wac","+",166019,0,0,0]
["ID=gene-wac","+",166022,0,0,0]
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["ID=gene-wac","+",166051,0,0,0]
["ID=gene-wac","+",166057,0,0,0]
["ID=gene-wac","+",166061,0,0,0]
["ID=gene-wac","+",166066,0,0,0]
["ID=gene-wac","+",166069,0,0,0]
["ID=gene-wac","+",166079,0,0,0]
["ID=gene-wac","+",166114,0,0,0]
["ID=gene-wac","+",166126,0,0,0]
["ID=gene-wac","+",166133,0,0,0]
["ID=gene-wac","+",166142,0,0,0]
["ID=gene-wac","+",166157,0,0,0]
["ID=gene-wac","+",166172,0,0,0]
["ID=gene-wac","+",166178,0,0,0]
["ID=gene-wac","+",166187,0,0,0]
["ID=gene-wac","+",166189,0,0,0]
["ID=gene-wac","+",166198,0,0,0]
["ID=gene-wac","+",166233,0,0,0]
["ID=gene-wac","+",166235,0,0,0]
["ID=gene-wac","+",166266,0,0,0]
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["ID=gene-wac","+",166301,0,0,0]
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["ID=gene-wac","+",166320,0,0,0]
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["ID=gene-13","+",166888,0,0,0]
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["ID=gene-13","+",166997,0,0,0]
["ID=gene-13","+",167008,0,0,0]
["ID=gene-13","+",167010,0,0,0]
["ID=gene-13","+",167013,0,0,0]
["ID=gene-13","+",167030,0,0,0]
["ID=gene-13","+",167033,0,0,0]
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["ID=gene-13","+",167077,0,0,0]
["ID=gene-13","+",167079,0,0,0]
["ID=gene-13","+",167082,0,0,0]
["ID=gene-13","+",167101,0,0,0]
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["ID=gene-13","+",167141,0,0,0]
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["ID=gene-13","+",167216,0,0,0]
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["ID=gene-13","+",167276,0,0,0]
["ID=gene-13","+",167281,0,0,0]
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["ID=gene-14","+",167290,0,0,0]
["ID=gene-14","+",167294,0,0,0]
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["ID=gene-14","+",167392,0,0,0]
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["ID=gene-14","+",167418,0,0,0]
["ID=gene-14","+",167421,0,0,0]
["ID=gene-14","+",167424,0,0,0]
["ID=gene-14","+",167451,0,0,0]
["ID=gene-14","+",167459,0,0,0]
["ID=gene-14","+",167462,0,0,0]
["ID=gene-14","+",167477,0,0,0]
["ID=gene-14","+",167496,0,0,0]
["ID=gene-14","+",167511,0,0,0]
["ID=gene-14","+",167518,0,0,0]
["ID=gene-14","+",167524,0,0,0]
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["ID=gene-14","+",167549,0,0,0]
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["ID=gene-14","+",167605,0,0,0]
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["ID=gene-14","+",167635,0,0,0]
["ID=gene-14","+",167638,0,0,0]
["ID=gene-14","+",167649,0,0,0]
["ID=gene-14","+",167653,0,0,0]
["ID=gene-14","+",167665,0,0,0]
["ID=gene-14","+",167697,0,0,0]
["ID=gene-14","+",167699,0,0,0]
["ID=gene-14","+",167707,0,0,0]
["ID=gene-14","+",167713,0,0,0]
["ID=gene-14","+",167721,0,0,0]
["ID=gene-14","+",167731,0,0,0]
["ID=gene-14","+",167747,0,0,0]
["ID=gene-14","+",167759,0,0,0]
["ID=gene-14","+",167766,0,0,0]
["ID=gene-14","+",167779,0,0,0]
["ID=gene-14","+",167785,0,0,0]
["ID=gene-14","+",167791,0,0,0]
["ID=gene-14","+",167800,0,0,0]
["ID=gene-14","+",167810,0,0,0]
["ID=gene-14","+",167827,0,0,0]
["ID=gene-14","+",167838,0,0,0]
["ID=gene-14","+",167857,0,0,0]
["ID=gene-14","+",167872,0,1,0]
["ID=gene-14","+",167880,0,0,0]
["ID=gene-14","+",167886,0,0,0]
["ID=gene-14","+",167905,0,0,0]
["ID=gene-14","+",167911,0,0,0]
["ID=gene-14","+",167923,0,0,0]
["ID=gene-14","+",167926,0,0,0]
["ID=gene-14","+",167936,0,0,0]
["ID=gene-14","+",167946,0,0,0]
["ID=gene-14","+",167956,0,0,0]
["ID=gene-14","+",167968,0,0,0]
["ID=gene-14","+",167975,0,0,0]
["ID=gene-14","+",167987,0,0,0]
["ID=gene-14","+",168001,0,0,0]
["ID=gene-14","+",168025,0,0,0]
["ID=gene-14","+",168053,0,0,0]
[null,{"$error":"#N/A"},168056,0,0,0]
[null,{"$error":"#N/A"},168060,0,0,0]
[null,{"$error":"#N/A"},168063,0,0,0]
[null,{"$error":"#N/A"},168065,0,0,0]
[null,{"$error":"#N/A"},168070,0,0,0]
[null,{"$error":"#N/A"},168074,0,0,0]
[null,{"$error":"#N/A"},168086,0,0,0]
["ID=gene-15","+",168106,0,0,0]
["ID=gene-15","+",168112,0,0,0]
["ID=gene-15","+",168114,0,0,0]
["ID=gene-15","+",168126,0,0,0]
["ID=gene-15","+",168133,0,0,0]
["ID=gene-15","+",168138,0,0,0]
["ID=gene-15","+",168165,0,0,0]
["ID=gene-15","+",168185,0,0,0]
["ID=gene-15","+",168198,0,0,0]
["ID=gene-15","+",168204,0,0,0]
["ID=gene-15","+",168206,0,0,0]
["ID=gene-15","+",168216,0,0,0]
["ID=gene-15","+",168219,0,0,0]
["ID=gene-15","+",168223,0,0,0]
["ID=gene-15","+",168243,0,0,0]
["ID=gene-15","+",168258,0,0,0]
["ID=gene-15","+",168272,0,0,0]
["ID=gene-15","+",168290,0,0,0]
["ID=gene-15","+",168294,0,0,0]
["ID=gene-15","+",168306,0,0,0]
["ID=gene-15","+",168311,0,0,0]
["ID=gene-15","+",168318,0,0,0]
["ID=gene-15","+",168320,0,0,0]
["ID=gene-15","+",168326,0,0,0]
["ID=gene-15","+",168332,0,0,0]
["ID=gene-15","+",168342,0,0,0]
["ID=gene-15","+",168346,0,0,0]
["ID=gene-15","+",168348,0,0,0]
["ID=gene-15","+",168360,0,0,0]
["ID=gene-15","+",168374,0,0,0]
["ID=gene-15","+",168386,0,0,0]
["ID=gene-15","+",168410,0,0,0]
["ID=gene-15","+",168413,0,0,0]
["ID=gene-15","+",168421,0,0,0]
["ID=gene-15","+",168423,0,0,0]
["ID=gene-15","+",168435,0,0,0]
["ID=gene-15","+",168438,0,0,0]
["ID=gene-15","+",168448,0,0,0]
["ID=gene-15","+",168459,0,0,0]
["ID=gene-15","+",168465,0,0,0]
["ID=gene-15","+",168472,0,0,0]
["ID=gene-15","+",168483,0,0,0]
["ID=gene-15","+",168494,0,0,0]
["ID=gene-15","+",168514,0,0,0]
["ID=gene-15","+",168531,0,0,0]
["ID=gene-15","+",168534,0,0,0]
["ID=gene-15","+",168540,0,0,0]
["ID=gene-15","+",168544,0,0,0]
["ID=gene-15","+",168564,0,0,0]
["ID=gene-15","+",168573,0,0,0]
["ID=gene-15","+",168582,0,0,0]
["ID=gene-15","+",168585,0,0,0]
["ID=gene-15","+",168593,0,0,0]
["ID=gene-15","+",168609,0,0,0]
["ID=gene-15","+",168611,0,0,0]
["ID=gene-15","+",168621,0,0,0]
["ID=gene-15","+",168623,0,0,0]
["ID=gene-15","+",168633,0,0,0]
["ID=gene-15","+",168638,0,0,0]
["ID=gene-15","+",168648,0,0,0]
["ID=gene-15","+",168665,0,0,0]
["ID=gene-15","+",168677,0,0,0]
["ID=gene-15","+",168691,0,0,0]
["ID=gene-15","+",168701,0,0,0]
["ID=gene-15","+",168719,0,0,0]
["ID=gene-15","+",168726,0,1,0]
["ID=gene-15","+",168729,0,0,0]
["ID=gene-15","+",168733,0,0,0]
["ID=gene-15","+",168735,0,0,0]
["ID=gene-15","+",168753,0,0,0]
["ID=gene-15","+",168798,0,0,0]
["ID=gene-15","+",168819,0,0,0]
["ID=gene-15","+",168848,0,0,0]
["ID=gene-15","+",168864,0,0,0]
["ID=gene-15","+",168867,0,0,0]
["ID=gene-15","+",168872,0,0,0]
["ID=gene-15","+",168876,0,0,0]
["ID=gene-15","+",168913,0,0,0]
[null,{"$error":"#N/A"},168920,0,0,0]

{"sheet":"Data S4","index":4,"n_rows":284,"n_cols":5,"rows_kept":284}
[]
["T4_REF_essentiality"]
[]
["*consensus call classification based on five subsampling replicates"]
["gene","total_TA_sites","TA_hits","saturation","consensus_call*"]
["ID=gene-1",70,6,0.0857142857142857,"Essential"]
["ID=gene-10",149,0,0,"Essential"]
["ID=gene-11",61,0,0,"Essential"]
["ID=gene-12",120,0,0,"Essential"]
["ID=gene-13",78,0,0,"Essential"]
["ID=gene-14",72,0,0,"Essential"]
["ID=gene-15",78,0,0,"Essential"]
["ID=gene-16",28,0,0,"Essential"]
["ID=gene-17",148,0,0,"Essential"]
["ID=gene-18",160,0,0,"Essential"]
["ID=gene-19",33,0,0,"Essential"]
["ID=gene-2",64,2,0.03125,"Essential"]
["ID=gene-20",124,0,0,"Essential"]
["ID=gene-21",50,0,0,"Essential"]
["ID=gene-22",45,0,0,"Essential"]
["ID=gene-23",107,1,0.00934579439252336,"Essential"]
["ID=gene-24",103,0,0,"Essential"]
["ID=gene-24.2",23,23,1,"Non-essential"]
["ID=gene-24.3",14,14,1,"Non-essential"]
["ID=gene-25",33,0,0,"Essential"]
["ID=gene-26",60,0,0,"Essential"]
["ID=gene-27",112,0,0,"Essential"]
["ID=gene-28",49,0,0,"Essential"]
["ID=gene-29",123,0,0,"Essential"]
["ID=gene-3",53,0,0,"Essential"]
["ID=gene-30",115,7,0.0608695652173913,"Essential"]
["ID=gene-30.1",21,21,1,"Non-essential"]
["ID=gene-30.2",72,72,1,"Non-essential"]
["ID=gene-30.3",28,27,0.964285714285714,"Non-essential"]
["ID=gene-30.4",21,21,1,"Non-essential"]
["ID=gene-30.5",20,19,0.95,"Non-essential"]
["ID=gene-30.6",22,22,1,"Non-essential"]
["ID=gene-30.7",29,28,0.96551724137931,"Non-essential"]
["ID=gene-30.8",25,25,1,"Non-essential"]
["ID=gene-30.9",6,6,1,"Non-essential"]
["ID=gene-31",19,1,0.0526315789473684,"Essential"]
["ID=gene-31.1",18,18,1,"Non-essential"]
["ID=gene-31.2",25,25,1,"Non-essential"]
["ID=gene-32",56,4,0.0714285714285714,"Essential"]
["ID=gene-33",23,4,0.173913043478261,"Essential"]
["ID=gene-34",317,1,3.15457413249211E-3,"Essential"]
["ID=gene-35",98,0,0,"Essential"]
["ID=gene-36",50,0,0,"Essential"]
["ID=gene-37",250,0,0,"Essential"]
["ID=gene-38",47,0,0,"Essential"]
["ID=gene-39",114,11,0.0964912280701754,"Essential"]
["ID=gene-39.1",26,25,0.961538461538462,"Non-essential"]
["ID=gene-39.2",12,12,1,"Non-essential"]
["ID=gene-4",35,0,0,"Essential"]
["ID=gene-40",28,20,0.714285714285714,"Intermediate"]
["ID=gene-41",98,1,0.0102040816326531,"Essential"]
["ID=gene-42",58,4,0.0689655172413793,"Essential"]
["ID=gene-43",194,1,0.00515463917525773,"Essential"]
["ID=gene-44",77,0,0,"Essential"]
["ID=gene-45",57,2,0.0350877192982456,"Essential"]
["ID=gene-45.2",23,15,0.652173913043478,"Intermediate"]
["ID=gene-46",149,2,0.0134228187919463,"Essential"]
["ID=gene-46.1",18,18,1,"Non-essential"]
["ID=gene-46.2",24,23,0.958333333333333,"Non-essential"]
["ID=gene-47.1",12,10,0.833333333333333,"Non-essential"]
["ID=gene-48",114,0,0,"Essential"]
["ID=gene-49",33,3,0.0909090909090909,"Essential"]
["ID=gene-49.1",14,13,0.928571428571429,"Non-essential"]
["ID=gene-49.2",25,25,1,"Non-essential"]
["ID=gene-49.3",23,21,0.91304347826087,"Non-essential"]
["ID=gene-5",130,0,0,"Essential"]
["ID=gene-5.1",46,1,0.0217391304347826,"Essential"]
["ID=gene-5.3",25,0,0,"Essential"]
["ID=gene-5.4",22,1,0.0454545454545455,"Essential"]
["ID=gene-51",76,0,0,"Essential"]
["ID=gene-52",100,5,0.05,"Essential"]
["ID=gene-52.1",16,16,1,"Non-essential"]
["ID=gene-53",64,0,0,"Essential"]
["ID=gene-54",87,3,0.0344827586206897,"Essential"]
["ID=gene-55",55,5,0.0909090909090909,"Essential"]
["ID=gene-55.1",18,18,1,"Non-essential"]
["ID=gene-55.2",24,24,1,"Non-essential"]
["ID=gene-55.3",10,10,1,"Non-essential"]
["ID=gene-55.4",12,12,1,"Non-essential"]
["ID=gene-55.5",25,25,1,"Non-essential"]
["ID=gene-55.6",21,21,1,"Non-essential"]
["ID=gene-55.8",21,20,0.952380952380952,"Non-essential"]
["ID=gene-56",29,1,0.0344827586206897,"Essential"]
["ID=gene-57A",8,7,0.875,"Non-essential"]
["ID=gene-57B",36,35,0.972222222222222,"Non-essential"]
["ID=gene-61",100,66,0.66,"Intermediate"]
["ID=gene-59",63,2,0.0317460317460317,"Essential"]
["ID=gene-6",187,0,0,"Essential"]
["ID=gene-60",41,1,0.024390243902439,"Essential"]
["ID=gene-60.1",31,29,0.935483870967742,"Non-essential"]
["ID=gene-61.1",13,13,1,"Non-essential"]
["ID=gene-61.2",59,55,0.932203389830508,"Non-essential"]
["ID=gene-61.4",22,22,1,"Non-essential"]
["ID=gene-62",50,10,0.2,"Essential"]
["ID=gene-67",13,0,0,"Essential"]
["ID=gene-68",28,0,0,"Essential"]
["ID=gene-7",285,1,0.00350877192982456,"Essential"]
["ID=gene-8",78,0,0,"Essential"]
["ID=gene-9",83,0,0,"Essential"]
["ID=gene-I-TevI",66,62,0.939393939393939,"Non-essential"]
["ID=gene-I-TevII",93,93,1,"Non-essential"]
["ID=gene-I-TevIII",20,20,1,"Non-essential"]
["ID=gene-SegG",63,63,1,"Non-essential"]
["ID=gene-a-gt",97,92,0.948453608247423,"Non-essential"]
["ID=gene-a-gt.2",19,18,0.947368421052632,"Non-essential"]
["ID=gene-a-gt.3",13,13,1,"Non-essential"]
["ID=gene-a-gt.4",26,26,1,"Non-essential"]
["ID=gene-a-gt.5",25,24,0.96,"Non-essential"]
["ID=gene-ac",19,19,1,"Non-essential"]
["ID=gene-alc",41,40,0.975609756097561,"Non-essential"]
["ID=gene-alt",179,174,0.972067039106145,"Non-essential"]
["ID=gene-alt.-1",17,17,1,"Non-essential"]
["ID=gene-alt.-2",20,20,1,"Non-essential"]
["ID=gene-alt.-3",19,19,1,"Non-essential"]
["ID=gene-alt.1",19,19,1,"Non-essential"]
["ID=gene-arn",27,26,0.962962962962963,"Non-essential"]
["ID=gene-arn.1",13,13,1,"Non-essential"]
["ID=gene-arn.2",22,21,0.954545454545455,"Non-essential"]
["ID=gene-arn.3",34,33,0.970588235294118,"Non-essential"]
["ID=gene-arn.4",16,16,1,"Non-essential"]
["ID=gene-asiA",23,7,0.304347826086957,"Essential"]
["ID=gene-asiA.1",11,11,1,"Non-essential"]
["ID=gene-b-gt",99,96,0.96969696969697,"Non-essential"]
["ID=gene-cd",40,39,0.975,"Non-essential"]
["ID=gene-cd.1",32,32,1,"Non-essential"]
["ID=gene-cd.2",19,18,0.947368421052632,"Non-essential"]
["ID=gene-cd.3",20,20,1,"Non-essential"]
["ID=gene-cd.4",17,17,1,"Non-essential"]
["ID=gene-cd.5",22,22,1,"Non-essential"]
["ID=gene-cef",18,18,1,"Non-essential"]
["ID=gene-dam",82,80,0.975609756097561,"Non-essential"]
["ID=gene-dda",125,123,0.984,"Non-essential"]
["ID=gene-dda.1",33,33,1,"Non-essential"]
["ID=gene-denA",45,45,1,"Non-essential"]
["ID=gene-denB",36,35,0.972222222222222,"Non-essential"]
["ID=gene-denB.1",14,12,0.857142857142857,"Non-essential"]
["ID=gene-denV",40,40,1,"Non-essential"]
["ID=gene-dexA",41,41,1,"Non-essential"]
["ID=gene-dexA.1",24,24,1,"Non-essential"]
["ID=gene-dexA.2",24,24,1,"Non-essential"]
["ID=gene-dmd",16,1,0.0625,"Essential"]
["ID=gene-dsbA",21,20,0.952380952380952,"Non-essential"]
["ID=gene-e",45,4,0.0888888888888889,"Essential"]
["ID=gene-e.2",27,27,1,"Non-essential"]
["ID=gene-e.3",37,37,1,"Non-essential"]
["ID=gene-e.4",43,42,0.976744186046512,"Non-essential"]
["ID=gene-e.5",53,52,0.981132075471698,"Non-essential"]
["ID=gene-e.6",43,43,1,"Non-essential"]
["ID=gene-e.7",30,30,1,"Non-essential"]
["ID=gene-e.8",23,23,1,"Non-essential"]
["ID=gene-frd",56,51,0.910714285714286,"Non-essential"]
["ID=gene-frd.1",12,12,1,"Non-essential"]
["ID=gene-frd.2",25,24,0.96,"Non-essential"]
["ID=gene-frd.3",18,18,1,"Non-essential"]
["ID=gene-goF",36,32,0.888888888888889,"Non-essential"]
["ID=gene-gp47",75,3,0.04,"Essential"]
["ID=gene-hoc",100,8,0.08,"Essential"]
["ID=gene-imm",20,20,1,"Non-essential"]
["ID=gene-imm.1",31,31,1,"Non-essential"]
["ID=gene-inh",49,1,0.0204081632653061,"Essential"]
["ID=gene-ipI",24,24,1,"Non-essential"]
["ID=gene-ipII",23,22,0.956521739130435,"Non-essential"]
["ID=gene-ipIII",46,42,0.91304347826087,"Non-essential"]
["ID=gene-mobA",5,5,1,"NA"]
["ID=gene-mobB",88,87,0.988636363636364,"Non-essential"]
["ID=gene-mobC",64,63,0.984375,"Non-essential"]
["ID=gene-mobD",82,81,0.98780487804878,"Non-essential"]
["ID=gene-mobD.1",59,58,0.983050847457627,"Non-essential"]
["ID=gene-mobD.2",15,15,1,"Non-essential"]
["ID=gene-mobD.2a",8,8,1,"Non-essential"]
["ID=gene-mobD.3",19,19,1,"Non-essential"]
["ID=gene-mobD.4",20,20,1,"Non-essential"]
["ID=gene-mobD.5",13,13,1,"Non-essential"]
["ID=gene-mobE",34,34,1,"Non-essential"]
["ID=gene-modA",63,60,0.952380952380952,"Non-essential"]
["ID=gene-modA.2",19,19,1,"Non-essential"]
["ID=gene-modA.3",48,48,1,"Non-essential"]
["ID=gene-modA.4",10,10,1,"Non-essential"]
["ID=gene-modB",58,55,0.948275862068966,"Non-essential"]
["ID=gene-motA",53,2,0.0377358490566038,"Essential"]
["ID=gene-motA.1",11,11,1,"Non-essential"]
["ID=gene-motB",42,42,1,"Non-essential"]
["ID=gene-motB.1",32,32,1,"Non-essential"]
["ID=gene-motB.2",56,56,1,"Non-essential"]
["ID=gene-mrh",56,56,1,"Non-essential"]
["ID=gene-mrh.1",31,31,1,"Non-essential"]
["ID=gene-mrh.2",16,16,1,"Non-essential"]
["ID=gene-ndd",41,40,0.975609756097561,"Non-essential"]
["ID=gene-ndd.1",21,21,1,"Non-essential"]
["ID=gene-ndd.2",8,8,1,"Non-essential"]
["ID=gene-ndd.2a",8,7,0.875,"Non-essential"]
["ID=gene-ndd.3",7,6,0.857142857142857,"Non-essential"]
["ID=gene-ndd.4",18,18,1,"Non-essential"]
["ID=gene-ndd.5",10,10,1,"Non-essential"]
["ID=gene-ndd.6",11,11,1,"Non-essential"]
["ID=gene-nrdA",181,156,0.861878453038674,"Non-essential"]
["ID=gene-nrdA.1",31,29,0.935483870967742,"Non-essential"]
["ID=gene-nrdA.2",30,28,0.933333333333333,"Non-essential"]
["ID=gene-nrdB",89,81,0.910112359550562,"Non-essential"]
["ID=gene-nrdB.1",21,21,1,"Non-essential"]
["ID=gene-nrdC",19,18,0.947368421052632,"Non-essential"]
["ID=gene-nrdC.1",29,27,0.931034482758621,"Non-essential"]
["ID=gene-nrdC.10",71,69,0.971830985915493,"Non-essential"]
["ID=gene-nrdC.11",68,65,0.955882352941177,"Non-essential"]
["ID=gene-nrdC.2",21,20,0.952380952380952,"Non-essential"]
["ID=gene-nrdC.3",94,91,0.968085106382979,"Non-essential"]
["ID=gene-nrdC.4",101,97,0.96039603960396,"Non-essential"]
["ID=gene-nrdC.5",82,82,1,"Non-essential"]
["ID=gene-nrdC.6",82,79,0.963414634146341,"Non-essential"]
["ID=gene-nrdC.7",53,52,0.981132075471698,"Non-essential"]
["ID=gene-nrdC.8",42,41,0.976190476190476,"Non-essential"]
["ID=gene-nrdC.9",18,18,1,"Non-essential"]
["ID=gene-nrdD",133,129,0.969924812030075,"Non-essential"]
["ID=gene-nrdG",37,35,0.945945945945946,"Non-essential"]
["ID=gene-nrdH",24,24,1,"Non-essential"]
["ID=gene-nudE",40,39,0.975,"Non-essential"]
["ID=gene-pin",39,39,1,"Non-essential"]
["ID=gene-pseT",70,68,0.971428571428571,"Non-essential"]
["ID=gene-pseT.1",17,17,1,"Non-essential"]
["ID=gene-pseT.2",30,6,0.2,"Strong fitness defect"]
["ID=gene-pseT.3",28,5,0.178571428571429,"Essential"]
["ID=gene-rI",23,23,1,"Non-essential"]
["ID=gene-rI.-1",11,11,1,"Non-essential"]
["ID=gene-rI.1",16,15,0.9375,"Non-essential"]
["ID=gene-rIIA",195,194,0.994871794871795,"Non-essential"]
["ID=gene-rIIA.1",21,20,0.952380952380952,"Non-essential"]
["ID=gene-rIIB",69,68,0.985507246376812,"Non-essential"]
["ID=gene-rIII",12,11,0.916666666666667,"Non-essential"]
["ID=gene-regA",31,28,0.903225806451613,"Non-essential"]
["ID=gene-regB",26,26,1,"Non-essential"]
["ID=gene-rnh",78,73,0.935897435897436,"Non-essential"]
["ID=gene-rnlA",87,35,0.402298850574713,"Essential"]
["ID=gene-rnlB",84,84,1,"Non-essential"]
["ID=gene-rpbA",29,29,1,"Non-essential"]
["ID=gene-segA",63,61,0.968253968253968,"Non-essential"]
["ID=gene-segB",66,63,0.954545454545455,"Non-essential"]
["ID=gene-segC",43,0,0,"Essential"]
["ID=gene-segD",66,58,0.878787878787879,"Non-essential"]
["ID=gene-segE",62,0,0,"Essential"]
["ID=gene-segF",61,57,0.934426229508197,"Non-essential"]
["ID=gene-soc",17,17,1,"Non-essential"]
["ID=gene-sp",22,22,1,"Non-essential"]
["ID=gene-srd",63,63,1,"Non-essential"]
["ID=gene-srh",9,9,1,"Non-essential"]
["ID=gene-stp",6,5,0.833333333333333,"Non-essential"]
["ID=gene-t",65,1,0.0153846153846154,"Essential"]
["ID=gene-td",71,66,0.929577464788732,"Non-essential"]
["ID=gene-tk",46,46,1,"Non-essential"]
["ID=gene-tk.1",22,20,0.909090909090909,"Non-essential"]
["ID=gene-tk.2",16,15,0.9375,"Non-essential"]
["ID=gene-tk.3",23,23,1,"Non-essential"]
["ID=gene-tk.4",46,45,0.978260869565217,"Non-essential"]
["ID=gene-trna.2",25,23,0.92,"Non-essential"]
["ID=gene-trna.3",40,39,0.975,"Non-essential"]
["ID=gene-trna.4",17,16,0.941176470588235,"Non-essential"]
["ID=gene-uvsW",127,0,0,"Essential"]
["ID=gene-uvsX",100,41,0.41,"Intermediate"]
["ID=gene-uvsY",40,21,0.525,"Intermediate"]
["ID=gene-uvsY.-1",21,18,0.857142857142857,"Non-essential"]
["ID=gene-uvsY.-2",11,10,0.909090909090909,"Non-essential"]
["ID=gene-vs",32,30,0.9375,"Non-essential"]
["ID=gene-vs.1",52,46,0.884615384615385,"Non-essential"]
["ID=gene-vs.3",21,20,0.952380952380952,"Non-essential"]
["ID=gene-vs.4",23,22,0.956521739130435,"Non-essential"]
["ID=gene-vs.5",17,17,1,"Non-essential"]
["ID=gene-vs.6",24,23,0.958333333333333,"Non-essential"]
["ID=gene-vs.7",26,25,0.961538461538462,"Non-essential"]
["ID=gene-vs.8",59,59,1,"Non-essential"]
["ID=gene-wac",118,0,0,"Essential"]
["ID=rnaC",12,10,0.833333333333333,"Non-essential"]
["ID=rnaD",7,7,1,"Non-essential"]
["ID=tRNA-Arg",5,5,1,"NA"]
["ID=tRNA-Ile",4,3,0.75,"NA"]
["ID=tRNA-Thr",4,4,1,"NA"]
["ID=tRNA-Ser",3,3,1,"NA"]
["ID=tRNA-Pro",3,3,1,"NA"]
["ID=tRNA-Gly",6,6,1,"Non-essential"]
["ID=tRNA-Leu",2,2,1,"NA"]
["ID=tRNA-Gln",5,4,0.8,"NA"]

{"sheet":"Data S5","index":5,"n_rows":14481,"n_cols":6,"rows_kept":14481}
[]
["T4_terminator_counts"]
[]
["#Generated by tpp from T4_Acr1_v3_merged_fastp_subsampleds12.fastq, chrom=Escherichia_virus_T4D"]
["TA_sites: 14,474\nTAs_hit: 6,048\ndensity: 0.418"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
["ID=gene-16","+",15,0,0,0]
["ID=gene-16","+",17,0,0,0]
["ID=gene-16","+",29,0,0,0]
["ID=gene-16","+",33,0,0,0]
["ID=gene-16","+",76,0,0,0]
["ID=gene-16","+",92,0,0,0]
["ID=gene-16","+",95,0,0,0]
["ID=gene-16","+",102,0,0,0]
["ID=gene-16","+",123,0,0,0]
["ID=gene-16","+",134,0,0,0]
["ID=gene-16","+",145,0,0,0]
["ID=gene-16","+",152,0,0,0]
["ID=gene-16","+",165,0,0,0]
["ID=gene-16","+",188,0,0,0]
["ID=gene-16","+",254,0,0,0]
["ID=gene-16","+",267,1,0,0]
["ID=gene-16","+",282,0,0,0]
["ID=gene-16","+",299,0,0,0]
["ID=gene-16","+",312,0,0,0]
["ID=gene-16","+",318,0,0,0]
["ID=gene-16","+",330,0,0,0]
["ID=gene-16","+",366,0,0,0]
["ID=gene-16","+",381,0,0,0]
["ID=gene-16","+",398,0,0,0]
["ID=gene-16","+",422,0,0,0]
["ID=gene-16","+",445,0,0,0]
["ID=gene-16","+",476,0,0,0]
["ID=gene-16,ID=gene-17","+",493,0,0,0]
["ID=gene-17","+",498,0,0,0]
["ID=gene-17","+",501,0,0,0]
["ID=gene-17","+",519,0,0,0]
["ID=gene-17","+",540,0,0,0]
["ID=gene-17","+",543,0,0,0]
["ID=gene-17","+",558,0,0,0]
["ID=gene-17","+",594,0,0,0]
["ID=gene-17","+",620,0,0,0]
["ID=gene-17","+",641,0,0,0]
["ID=gene-17","+",651,0,0,0]
["ID=gene-17","+",660,0,0,0]
["ID=gene-17","+",663,0,0,0]
["ID=gene-17","+",685,0,0,0]
["ID=gene-17","+",696,0,0,0]
["ID=gene-17","+",707,0,0,0]
["ID=gene-17","+",709,0,0,0]
["ID=gene-17","+",715,0,0,0]
["ID=gene-17","+",721,0,0,0]
["ID=gene-17","+",724,0,0,0]
["ID=gene-17","+",737,0,0,0]
["ID=gene-17","+",739,0,0,0]
["ID=gene-17","+",751,0,0,0]
["ID=gene-17","+",766,0,0,0]
["ID=gene-17","+",769,0,0,0]
["ID=gene-17","+",772,0,0,0]
["ID=gene-17","+",826,0,0,0]
["ID=gene-17","+",833,0,0,0]
["ID=gene-17","+",848,0,0,0]
["ID=gene-17","+",859,0,0,0]
["ID=gene-17","+",865,0,0,0]
["ID=gene-17","+",872,0,0,0]
["ID=gene-17","+",882,0,0,0]
["ID=gene-17","+",894,0,0,0]
["ID=gene-17","+",902,0,0,0]
["ID=gene-17","+",913,0,0,0]
["ID=gene-17","+",924,0,0,0]
["ID=gene-17","+",934,0,0,0]
["ID=gene-17","+",940,0,0,0]
["ID=gene-17","+",952,0,0,0]
["ID=gene-17","+",957,0,0,0]
["ID=gene-17","+",973,0,0,0]
["ID=gene-17","+",984,0,0,0]
["ID=gene-17","+",987,0,0,0]
["ID=gene-17","+",991,0,0,0]
["ID=gene-17","+",1011,0,0,0]
["ID=gene-17","+",1018,0,0,0]
["ID=gene-17","+",1027,0,0,0]
["ID=gene-17","+",1035,2,0,0]
["ID=gene-17","+",1039,0,0,0]
["ID=gene-17","+",1077,0,0,0]
["ID=gene-17","+",1084,0,0,0]
["ID=gene-17","+",1087,0,0,0]
["ID=gene-17","+",1119,0,0,0]
["ID=gene-17","+",1144,0,0,0]
["ID=gene-17","+",1161,0,0,0]
["ID=gene-17","+",1165,0,0,0]
["ID=gene-17","+",1187,0,0,0]
["ID=gene-17","+",1216,0,0,0]
["ID=gene-17","+",1235,0,0,0]
["ID=gene-17","+",1255,0,0,0]
["ID=gene-17","+",1285,0,0,0]
["ID=gene-17","+",1296,0,0,0]
["ID=gene-17","+",1324,0,0,0]
["ID=gene-17","+",1327,0,0,0]
["ID=gene-17","+",1330,0,0,0]
["ID=gene-17","+",1333,0,0,0]
["ID=gene-17","+",1342,0,0,0]
["ID=gene-17","+",1350,0,0,0]
["ID=gene-17","+",1361,0,0,0]
["ID=gene-17","+",1366,0,0,0]
["ID=gene-17","+",1390,0,0,0]
["ID=gene-17","+",1409,0,0,0]
["ID=gene-17","+",1411,0,0,0]
["ID=gene-17","+",1417,0,0,0]
["ID=gene-17","+",1432,0,0,0]
["ID=gene-17","+",1445,0,0,0]
["ID=gene-17","+",1447,0,0,0]
["ID=gene-17","+",1459,0,0,0]
["ID=gene-17","+",1488,0,0,0]
["ID=gene-17","+",1498,0,0,0]
["ID=gene-17","+",1512,0,1,0]
["ID=gene-17","+",1534,0,0,0]
["ID=gene-17","+",1561,0,0,0]
["ID=gene-17","+",1566,0,0,0]
["ID=gene-17","+",1584,0,0,0]
["ID=gene-17","+",1591,0,0,0]
["ID=gene-17","+",1600,0,0,0]
["ID=gene-17","+",1608,0,0,0]
["ID=gene-17","+",1639,0,0,0]
["ID=gene-17","+",1657,0,0,0]
["ID=gene-17","+",1664,0,0,0]
["ID=gene-17","+",1666,0,0,0]
["ID=gene-17","+",1677,0,0,0]
["ID=gene-17","+",1706,0,0,0]
["ID=gene-17","+",1720,0,0,0]
["ID=gene-17","+",1723,0,0,0]
["ID=gene-17","+",1732,0,0,0]
["ID=gene-17","+",1777,0,0,0]
["ID=gene-17","+",1788,0,0,0]
["ID=gene-17","+",1794,0,0,0]
["ID=gene-17","+",1807,0,1,0]
["ID=gene-17","+",1814,0,0,0]
["ID=gene-17","+",1818,0,0,0]
["ID=gene-17","+",1821,0,0,0]
["ID=gene-17","+",1826,0,0,0]
["ID=gene-17","+",1844,1,0,0]
["ID=gene-17","+",1846,0,0,0]
["ID=gene-17","+",1854,0,0,0]
["ID=gene-17","+",1858,0,0,0]
["ID=gene-17","+",1861,0,0,0]
["ID=gene-17","+",1889,0,0,0]
["ID=gene-17","+",1891,0,0,0]
["ID=gene-17","+",1899,0,0,0]
["ID=gene-17","+",1904,0,0,0]
["ID=gene-17","+",1915,0,0,0]
["ID=gene-17","+",1928,0,0,0]
["ID=gene-17","+",1930,0,0,0]
["ID=gene-17","+",1938,0,0,0]
["ID=gene-17","+",1954,0,0,0]
["ID=gene-17","+",1971,0,0,0]
["ID=gene-17","+",1986,0,0,0]
["ID=gene-17","+",1996,0,0,0]
["ID=gene-17","+",2008,0,0,0]
["ID=gene-17","+",2014,0,0,0]
["ID=gene-17","+",2017,0,0,0]
["ID=gene-17","+",2035,0,0,0]
["ID=gene-17","+",2047,0,0,0]
["ID=gene-17","+",2056,0,0,0]
["ID=gene-17","+",2093,0,0,0]
["ID=gene-17","+",2106,0,0,0]
["ID=gene-17","+",2109,0,0,0]
["ID=gene-17","+",2118,0,0,0]
["ID=gene-17","+",2136,0,0,0]
["ID=gene-17","+",2155,0,0,0]
["ID=gene-17","+",2162,0,0,0]
["ID=gene-17","+",2170,0,0,0]
["ID=gene-17","+",2187,0,0,0]
["ID=gene-17","+",2199,0,0,0]
["ID=gene-17","+",2221,0,0,0]
["ID=gene-17","+",2234,0,0,0]
["ID=gene-17","+",2245,0,0,0]
["ID=gene-17","+",2247,0,0,0]
["ID=gene-17","+",2276,0,0,0]
["ID=gene-17","+",2286,0,0,0]
["ID=gene-17","+",2296,0,0,0]
["ID=gene-17","+",2307,0,0,0]
["ID=gene-17","+",2309,0,0,0]
[null,{"$error":"#N/A"},2313,0,0,0]
[null,{"$error":"#N/A"},2315,0,0,0]
[null,{"$error":"#N/A"},2318,0,0,0]
[null,{"$error":"#N/A"},2325,0,0,0]
[null,{"$error":"#N/A"},2328,0,0,0]
[null,{"$error":"#N/A"},2338,0,0,0]
["ID=gene-18","+",2350,0,0,0]
["ID=gene-18","+",2353,0,0,0]
["ID=gene-18","+",2381,0,0,0]
["ID=gene-18","+",2398,0,0,0]
["ID=gene-18","+",2402,0,0,0]
["ID=gene-18","+",2405,0,0,0]
["ID=gene-18","+",2411,0,1,0]
["ID=gene-18","+",2417,0,0,0]
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{"sheet":"Data S6","index":6,"n_rows":14481,"n_cols":6,"rows_kept":14481}
[]
["T4_ΔrnlA_counts"]
[]
["#Generated by tpp from JR_1_merged_fastp_subsampled_s12.fastq, chrom=Escherichia_virus_T4D"]
["TA_sites: 14,474\nTAs_hit: 7,899\ndensity: 0.546"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S7","index":7,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Control_RexAB_counts"]
[]
["#Generated by tpp from E1_R1_001_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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{"sheet":"Data S8","index":8,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_RexAB_counts"]
[]
["#Generated by tpp from Rex1_R1_001_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S9","index":9,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Control_RnlAB_counts"]
[]
["#Generated by tpp from T4_delrnlA_merged_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S10","index":10,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_RnlAB_counts"]
[]
["#Generated by tpp from T4_BW_2_merged_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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{"sheet":"Data S11","index":11,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Control_CBASS_counts"]
[]
["#Generated by tpp from 352_R2_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S12","index":12,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_CBASS_counts"]
[]
["#Generated by tpp from 351_R2_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S13","index":13,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Control_DarTG1_counts"]
[]
["#Generated by tpp from LB_EV_R1_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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{"sheet":"Data S14","index":14,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_DarTG1_counts"]
[]
["#Generated by tpp from darTG1_R1_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S15","index":15,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Control_DarTG2_counts"]
[]
["#Generated by tpp from M9_EV_R1_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S16","index":16,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_DarTG2_counts"]
[]
["#Generated by tpp from darTG2_R1_L2_R1_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S17","index":17,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_K-12_counts"]
[]
["#Generated by tpp from LB_2_R1_001_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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["ID=gene-16","+",381,0,0,0]
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{"sheet":"Data S18","index":18,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_M9_counts"]
[]
["#Generated by tpp from M9_1_R1_001_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
["gene","strand","TA_site","Fwd_read_count","Rev_read_count","Total_read_count*"]
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{"sheet":"Data S19","index":19,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_CFE299_counts"]
[]
["#Generated by tpp from T4_299_allmerged_fastp_subsampleds12.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S20","index":20,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_CFE331_counts"]
[]
["#Generated by tpp from T4_331_allmerged_fastp_subsampleds12.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S21","index":21,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_K-12_ΔRM_counts"]
[]
["#Generated by tpp from T4_RM_37_R1_merged_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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{"sheet":"Data S22","index":22,"n_rows":14480,"n_cols":6,"rows_kept":14480}
[]
["T4_Mokosh_type_I_counts"]
[]
["#Generated by tpp from T4_Mok_R1_merged_fastp_subsampled5M.fastq, chrom=Escherichia_virus_T4D"]
["*For Total_read_count, a minimum-read threshold is applied: TA sites with ≤10 mapped reads were set to 0"]
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[null,{"$error":"#N/A"},138459,0,60,60]
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[null,{"$error":"#N/A"},138488,2,1792,1794]
[null,{"$error":"#N/A"},138499,2,1136,1138]
[null,{"$error":"#N/A"},138502,0,1494,1494]
[null,{"$error":"#N/A"},138504,17,4548,4565]
[null,{"$error":"#N/A"},138516,0,231,231]
[null,{"$error":"#N/A"},138525,1,597,598]
[null,{"$error":"#N/A"},138536,2,389,391]
[null,{"$error":"#N/A"},138540,1,311,312]
[null,{"$error":"#N/A"},138553,1,1163,1164]
[null,{"$error":"#N/A"},138555,1,356,357]
[null,{"$error":"#N/A"},138562,0,168,168]
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["ID=gene-ipIII","-",138899,5,2282,2287]
["ID=gene-ipIII","-",138902,11,9910,9921]
["ID=gene-ipIII","-",138920,2,601,603]
["ID=gene-ipIII","-",138932,1,162,163]
["ID=gene-ipIII","-",138950,2,2020,2022]
["ID=gene-ipIII","-",138954,1,200,201]
["ID=gene-ipIII","-",138962,0,0,0]
["ID=gene-ipIII","-",138995,0,26,26]
["ID=gene-ipIII","-",139013,5,2643,2648]
["ID=gene-ipIII","-",139017,12,7777,7789]
["ID=gene-ipIII","-",139021,2,667,669]
["ID=gene-ipIII","-",139031,4,912,916]
["ID=gene-ipIII","-",139043,0,241,241]
["ID=gene-ipIII","-",139069,0,281,281]
["ID=gene-ipIII","-",139088,0,101,101]
["ID=gene-ipIII","-",139104,0,469,469]
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{"sheet":"Data S23","index":23,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_T4_REF_vs_T4_ΔrnlA"]
[]
["#Resampling"]
["#Console: python3 ../../transit/src/transit.py resampling subsampled_replicates_lib5a/Lib_5A_001_fastp_subsampled_s12_edited10min.wig subsampled_replicates_JR1/JR_1_merged_fastp_subsampled_s12_edited10min.wig ../02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR lib5a_JR1"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'subsampled_replicates_lib5a/Lib_5A_001_fastp_subsampled_s12_edited10min.wig'"]
["#Experimental Data: b'subsampled_replicates_JR1/JR_1_merged_fastp_subsampled_s12_edited10min.wig'"]
["#Annotation path: b'../02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 2"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","8.4","5.3","-0.57","577.1","366.43","-3.1","0.59080","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.4","0.3","-0.02","22.8","21.69","-0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","261.9","147.8","-0.82","6024.0","3398.62","-114.1","0.16230","1.00000"]
["ID=gene-24.3","hypothetical protein","14","255.8","196.7","-0.38","3581.9","2754.32","-59.1","0.60820","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","4.4","5.1","0.20","500.3","590.53","0.8","0.84960","1.00000"]
["ID=gene-30.1","hypothetical protein","21","210.8","195.4","-0.11","4426.6","4104.37","-15.3","0.77370","1.00000"]
["ID=gene-30.2","hypothetical protein","71","231.8","293.7","0.34","16459.5","20854.40","61.9","0.22590","1.00000"]
["ID=gene-30.3","hypothetical protein","28","209.4","302.6","0.53","5862.1","8473.06","93.2","0.28420","1.00000"]
["ID=gene-30.4","hypothetical protein","21","302.7","349.6","0.21","6356.3","7340.79","46.9","0.66330","1.00000"]
["ID=gene-30.5","hypothetical protein","20","375.7","230.8","-0.70","7514.3","4616.74","-144.9","0.44360","1.00000"]
["ID=gene-30.6","hypothetical protein","21","159.3","183.4","0.20","3346.2","3850.45","24.0","0.66890","1.00000"]
["ID=gene-30.7","hypothetical protein","28","240.8","300.5","0.32","6742.9","8412.97","59.6","0.44040","1.00000"]
["ID=gene-30.8","hypothetical protein","24","209.5","1966.2","3.22","5029.2","47187.63","1756.6","0.18910","1.00000"]
["ID=gene-30.9","hypothetical protein","5","181.7","479.4","1.39","908.6","2396.93","297.7","0.28460","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","7.1","4.4","-0.57","134.2","84.04","-2.6","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","147.7","194.2","0.39","2511.0","3301.48","46.5","0.40430","1.00000"]
["ID=gene-31.2","hypothetical protein","24","222.7","326.7","0.55","5345.4","7839.60","103.9","0.26580","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.5","0.6","0.10","27.4","32.98","0.1","0.87290","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","14.6","12.8","-0.18","336.4","293.69","-1.9","0.88100","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","5.1","6.2","0.25","576.7","705.30","1.1","0.79910","1.00000"]
["ID=gene-39.1","hypothetical protein","25","233.1","267.9","0.20","5827.1","6697.84","34.8","0.50270","1.00000"]
["ID=gene-39.2","hypothetical protein","11","102.1","118.5","0.21","1122.6","1303.06","16.4","0.66560","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","17.9","8.0","-1.06","483.2","216.88","-9.9","0.09090","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.2","0.29","0.0","21.69","0.2","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","2.8","5.5","0.78","157.8","312.21","2.7","0.50610","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.1","0.6","0.56","16.0","116.57","0.5","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.1","0.11","0.0","5.87","0.1","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.6","0.2","-0.46","33.5","9.04","-0.4","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","20.4","33.6","0.69","449.0","740.09","13.2","0.28550","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.3","0.4","0.20","37.6","65.97","0.2","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","224.3","280.7","0.32","4036.9","5052.30","56.4","0.50080","1.00000"]
["ID=gene-46.2","hypothetical protein","24","232.3","288.2","0.31","5574.3","6917.88","56.0","0.62540","1.00000"]
["ID=gene-47.1","hypothetical protein","12","141.6","142.2","0.01","1699.3","1706.99","0.6","0.99210","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","12.4","12.4","0.01","408.3","410.26","0.1","1.00000","1.00000"]
["ID=gene-49.1","hypothetical protein","13","235.9","239.7","0.02","3066.4","3115.78","3.8","0.97900","1.00000"]
["ID=gene-49.2","hypothetical protein","24","202.6","265.9","0.39","4863.4","6382.02","63.3","0.23660","1.00000"]
["ID=gene-49.3","hypothetical protein","23","148.6","223.8","0.59","3417.6","5147.63","75.2","0.22490","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.6","0.51","4.2","24.85","0.5","0.49690","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.3","0.0","-0.35","5.7","0.00","-0.3","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.6","1.2","0.46","58.2","117.93","0.6","0.94840","1.00000"]
["ID=gene-52.1","hypothetical protein","15","222.9","308.1","0.47","3343.1","4621.71","85.2","0.43820","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.1","0.1","-0.04","10.6","8.13","-0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.9","1.0","0.07","49.0","54.22","0.1","0.89920","1.00000"]
["ID=gene-55.1","hypothetical protein","18","176.4","251.4","0.51","3175.5","4525.02","75.0","0.46550","1.00000"]
["ID=gene-55.2","hypothetical protein","23","211.6","171.2","-0.30","4867.6","3937.65","-40.4","0.55060","1.00000"]
["ID=gene-55.3","hypothetical protein","9","202.5","294.1","0.54","1822.5","2646.79","91.6","0.49590","1.00000"]
["ID=gene-55.4","hypothetical protein","11","151.5","186.4","0.30","1667.0","2050.83","34.9","0.43240","1.00000"]
["ID=gene-55.5","hypothetical protein","25","208.7","219.4","0.07","5217.7","5485.60","10.7","0.85140","1.00000"]
["ID=gene-55.6","hypothetical protein","20","519.9","414.8","-0.33","10398.2","8295.04","-105.2","0.48750","1.00000"]
["ID=gene-55.8","hypothetical protein","20","370.9","187.8","-0.98","7418.8","3755.11","-183.2","0.05100","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","35.9","34.1","-0.07","287.0","272.90","-1.8","0.94570","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","287.7","314.8","0.13","10071.2","11019.54","27.1","0.57010","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","27.0","22.7","-0.24","2670.3","2243.76","-4.3","0.76720","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","9.1","7.0","-0.33","572.5","440.98","-2.1","0.80900","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","252.7","246.7","-0.03","7833.2","7648.48","-6.0","0.94800","1.00000"]
["ID=gene-61.1","hypothetical protein","12","115.6","271.8","1.23","1386.8","3262.17","156.3","0.22320","1.00000"]
["ID=gene-61.2","hypothetical protein","58","155.6","161.9","0.06","9025.0","9392.98","6.3","0.82190","1.00000"]
["ID=gene-61.4","hypothetical protein","21","254.3","693.8","1.44","5340.5","14570.43","439.5","0.15030","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","7.6","8.9","0.20","372.9","436.46","1.3","0.81730","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","-0.04","8.4","0.00","-0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","106.0","254.1","1.25","6889.7","16518.70","148.1","0.04090","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","377.2","416.1","0.14","34706.4","38283.07","38.9","0.88130","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","85.0","84.9","-0.00","1615.7","1613.92","-0.1","0.99890","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","328.3","403.3","0.30","20682.7","25406.08","75.0","0.56030","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","253.0","88.9","-1.50","24290.8","8533.15","-164.1","0.00000","0.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","394.0","213.0","-0.88","7091.9","3833.73","-181.0","0.35300","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","88.3","107.9","0.29","1148.5","1402.91","19.6","0.75300","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","107.8","135.1","0.32","2696.1","3378.29","27.3","0.47330","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","78.9","60.3","-0.38","1892.4","1447.19","-18.6","0.35770","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","370.8","374.3","0.01","6673.7","6738.06","3.6","0.97970","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","398.2","414.3","0.06","15928.7","16570.66","16.0","0.86910","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","197.8","210.5","0.09","35212.4","37462.56","12.6","0.97670","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","154.4","137.4","-0.17","2625.0","2335.03","-17.1","0.64080","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","158.5","214.4","0.43","3011.6","4073.65","55.9","0.32930","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","230.7","381.8","0.72","4151.7","6872.25","151.1","0.33540","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","188.8","201.4","0.09","3397.9","3625.89","12.7","0.80340","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","216.8","249.7","0.20","5853.0","6741.67","32.9","0.59760","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","421.9","406.8","-0.05","5063.4","4881.51","-15.2","0.92730","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","228.7","386.1","0.75","4803.7","8107.54","157.3","0.51020","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","414.4","419.4","0.02","13675.2","13839.38","5.0","0.96170","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","253.6","325.3","0.36","4057.1","5204.56","71.7","0.33480","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","49.7","28.8","-0.77","1093.3","633.46","-20.9","0.40890","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","222.2","214.6","-0.05","2443.7","2360.78","-7.5","0.93110","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","162.1","168.1","0.05","15887.7","16473.06","6.0","0.78610","1.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","53.1","63.4","0.25","2070.0","2473.29","10.3","0.41970","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","172.7","232.5","0.43","5527.9","7441.09","59.8","0.11170","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","183.2","210.6","0.20","3481.5","4000.90","27.3","0.50360","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","345.1","355.6","0.04","6557.8","6756.58","10.5","0.92030","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","252.1","271.7","0.11","4033.1","4347.91","19.7","0.85370","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","459.6","438.0","-0.07","9652.3","9197.79","-21.6","0.88650","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","173.6","462.9","1.41","2950.8","7869.88","289.4","0.21800","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","161.4","263.9","0.71","13069.6","21375.36","102.5","0.27610","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","278.6","295.3","0.08","34828.5","36909.53","16.6","0.69610","1.00000"]
["ID=gene-dda.1","hypothetical protein","33","220.4","240.1","0.12","7273.6","7921.84","19.6","0.79880","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","135.7","106.4","-0.35","6105.0","4788.89","-29.2","0.17280","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","229.5","194.7","-0.24","8030.9","6814.87","-34.7","0.59260","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","138.8","178.5","0.36","1803.9","2320.57","39.7","0.53490","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","462.7","427.0","-0.12","18044.0","16651.53","-35.7","0.75820","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","153.5","184.8","0.27","6140.0","7393.65","31.3","0.31460","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","263.8","257.2","-0.04","6067.0","5916.64","-6.5","0.92550","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","280.0","346.4","0.31","6720.5","8313.57","66.4","0.62220","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","317.0","8.31","0.0","4755.45","317.0","0.00000","0.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","104.9","153.4","0.54","2203.0","3220.60","48.5","0.33080","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","4.9","3.8","-0.30","217.5","168.98","-1.1","0.87260","1.00000"]
["ID=gene-e.2","hypothetical protein","26","133.8","148.5","0.15","3480.0","3861.29","14.7","0.66390","1.00000"]
["ID=gene-e.3","hypothetical protein","37","210.2","134.9","-0.64","7777.0","4991.30","-75.3","0.15930","1.00000"]
["ID=gene-e.4","hypothetical protein","42","156.3","145.3","-0.10","6566.5","6103.24","-11.0","0.75690","1.00000"]
["ID=gene-e.5","hypothetical protein","52","310.5","155.1","-1.00","16143.9","8065.52","-155.4","0.32130","1.00000"]
["ID=gene-e.6","hypothetical protein","42","377.0","328.1","-0.20","15832.9","13779.74","-48.9","0.54910","1.00000"]
["ID=gene-e.7","hypothetical protein","29","269.0","238.6","-0.17","7800.9","6918.33","-30.4","0.68130","1.00000"]
["ID=gene-e.8","hypothetical protein","22","306.3","421.0","0.46","6737.6","9261.49","114.7","0.71300","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","149.0","207.6","0.48","8196.3","11419.41","58.6","0.19320","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","151.9","124.2","-0.29","1823.3","1490.57","-27.7","0.63920","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","397.8","275.3","-0.53","9546.2","6608.38","-122.4","0.21720","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","208.4","211.9","0.02","3543.1","3602.40","3.5","0.95310","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","110.5","179.5","0.70","3867.4","6283.52","69.0","0.10640","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","15.6","14.9","-0.06","1171.3","1120.52","-0.7","0.96780","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.7","1.4","0.53","66.9","140.07","0.7","0.54300","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","502.4","469.7","-0.10","10047.3","9394.33","-32.6","0.84320","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","274.5","287.0","0.06","8509.5","8895.97","12.5","0.85310","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.1","0.0","-0.17","6.1","0.00","-0.1","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","440.1","444.3","0.01","10123.3","10218.46","4.1","0.97270","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","175.6","200.3","0.19","3862.4","4406.19","24.7","0.67700","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","361.3","306.5","-0.24","16257.2","13791.03","-54.8","0.69420","1.00000"]
["ID=gene-mobA","homing endonuclease","5","55.4","38.8","-0.50","277.1","193.83","-16.7","0.62630","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","283.2","269.9","-0.07","24637.9","23481.76","-13.3","0.88160","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","385.3","332.2","-0.21","24662.2","21258.33","-53.2","0.40320","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","194.6","225.5","0.21","15765.7","18267.71","30.9","0.63810","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","265.2","258.0","-0.04","15647.8","15221.96","-7.2","0.88360","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","618.7","514.3","-0.27","8661.6","7200.27","-104.4","0.49430","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","250.3","229.3","-0.13","1752.2","1604.88","-21.0","0.85010","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","400.0","303.8","-0.40","7600.6","5772.51","-96.2","0.50990","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","165.7","116.9","-0.50","3148.9","2220.72","-48.9","0.32000","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","378.0","336.1","-0.17","4536.1","4033.44","-41.9","0.76630","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","128.8","141.0","0.13","4250.2","4653.34","12.2","0.75590","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","92.3","65.1","-0.50","5725.2","4037.50","-27.2","0.15600","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","205.7","151.2","-0.44","3702.4","2721.79","-54.5","0.41430","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","146.1","109.0","-0.42","6868.4","5125.04","-37.1","0.30860","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","166.9","140.4","-0.25","1668.9","1404.27","-26.5","0.65430","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","143.1","103.3","-0.47","8299.3","5992.55","-39.8","0.15390","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","8.3","11.3","0.40","442.1","599.57","3.0","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","330.5","276.7","-0.26","3305.1","2766.52","-53.9","0.69880","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","253.9","348.6","0.46","10411.1","14292.56","94.7","0.11370","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","268.4","339.1","0.34","8321.7","10512.14","70.7","0.36430","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","228.9","261.2","0.19","12588.7","14363.95","32.3","0.43970","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","383.1","275.0","-0.48","21451.7","15398.62","-108.1","0.26990","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","490.3","439.8","-0.16","15198.8","13632.89","-50.5","0.69170","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","221.6","154.0","-0.52","3324.1","2309.27","-67.7","0.45200","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","197.9","267.2","0.43","7915.3","10687.00","69.3","0.18140","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","223.7","187.6","-0.25","4473.7","3751.50","-36.1","0.52120","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","111.4","156.3","0.48","891.5","1250.20","44.8","0.61080","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","202.0","230.5","0.19","1616.1","1843.89","28.5","0.71240","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","72.4","86.4","0.25","507.1","604.54","13.9","0.69180","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","353.5","360.7","0.03","6363.1","6493.17","7.2","0.94630","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","402.3","335.7","-0.26","3621.0","3021.35","-66.6","0.65770","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","239.6","198.3","-0.27","2636.0","2180.96","-41.4","0.64530","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","24.8","24.0","-0.05","4458.9","4315.83","-0.8","0.76130","1.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","248.3","253.0","0.03","7449.3","7590.20","4.7","0.95100","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","163.3","523.4","1.67","4736.4","15179.94","360.1","0.11700","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","27.4","25.1","-0.12","985.0","902.29","-2.3","0.70270","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","241.2","372.5","0.63","5064.9","7822.89","131.3","0.84380","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","74.5","85.7","0.20","1415.0","1627.47","11.2","0.77000","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","183.7","213.9","0.22","5144.3","5988.48","30.1","0.57740","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","277.8","224.1","-0.31","19443.0","15689.15","-53.6","0.37240","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","209.3","220.3","0.07","14232.1","14982.49","11.0","0.74080","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","248.1","135.2","-0.87","4961.9","2703.72","-112.9","0.55700","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","151.6","161.0","0.09","14252.6","15129.34","9.3","0.75070","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","171.5","138.3","-0.31","17147.2","13828.53","-33.2","0.16350","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","198.9","222.8","0.16","16109.3","18045.86","23.9","0.57880","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","182.6","253.5","0.47","14788.6","20532.25","70.9","0.93650","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","354.8","307.1","-0.21","18802.0","16278.78","-47.6","0.50060","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","370.1","354.2","-0.06","15175.6","14521.63","-16.0","0.87170","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","143.5","160.9","0.16","2439.5","2735.34","17.4","0.73850","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","273.8","284.4","0.05","10953.2","11375.13","10.5","0.90200","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","328.0","312.7","-0.07","11807.0","11256.30","-15.3","0.85930","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2361.9","561.4","-2.07","54322.7","12912.23","-1800.5","0.03540","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","120.0","134.4","0.16","4678.3","5241.61","14.4","0.73030","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","287.2","392.7","0.45","11201.4","15316.39","105.5","0.77790","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","288.8","296.6","0.04","19925.4","20467.19","7.9","0.89480","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","168.9","115.1","-0.55","2702.9","1842.09","-53.8","0.30210","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","3.1","9.2","1.30","93.5","275.16","6.1","0.04170","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","1.7","6.2","1.40","48.3","173.50","4.5","0.02780","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","514.2","654.5","0.35","11827.2","15053.88","140.3","0.75160","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","272.5","185.7","-0.55","2997.2","2042.25","-86.8","0.29100","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","1233.9","13245.0","3.42","19742.1","211919.60","12011.1","0.75880","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","294.0","309.4","0.07","57042.0","60017.63","15.3","0.88890","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","156.1","166.5","0.09","3121.1","3329.49","10.4","0.79230","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","280.1","359.1","0.36","19043.8","24417.04","79.0","0.18550","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","139.8","140.8","0.01","1537.4","1548.40","1.0","0.98730","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","89.6","94.4","0.08","2687.7","2832.94","4.8","0.86670","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","230.4","342.0","0.57","5991.0","8893.26","111.6","0.23690","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","59.6","70.5","0.24","4648.2","5499.15","10.9","0.28890","1.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","36.3","16.0","-1.13","3122.3","1376.26","-20.3","0.01340","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","225.2","223.3","-0.01","18694.8","18537.45","-1.9","0.96170","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","131.6","138.4","0.07","3685.3","3876.20","6.8","0.84400","1.00000"]
["ID=gene-segA","SegA homing endonuclease","62","204.5","262.2","0.36","12678.0","16256.64","57.7","0.25830","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","237.3","331.8","0.48","15423.1","21568.28","94.5","0.66040","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.4","0.44","0.0","15.36","0.4","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","148.2","141.8","-0.06","9635.9","9214.96","-6.5","0.82620","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","240.8","276.0","0.20","14450.7","16557.10","35.1","0.54890","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","769.6","464.7","-0.73","12314.2","7435.22","-304.9","0.37180","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","313.8","327.9","0.06","6589.0","6884.90","14.1","0.86250","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","177.2","342.7","0.95","10987.0","21247.04","165.5","0.72710","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","402.7","390.3","-0.05","3624.5","3512.48","-12.4","0.94460","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","206.0","120.8","-0.77","1236.3","724.73","-85.3","0.60860","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","96.3","142.6","0.56","3660.6","5418.73","46.3","0.14630","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","174.3","230.0","0.40","7845.4","10349.04","55.6","0.21090","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","169.5","120.1","-0.49","3558.7","2522.08","-49.4","0.17710","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","234.1","186.9","-0.32","3745.0","2990.63","-47.1","0.55440","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","698.4","1275.4","0.87","16063.7","29334.69","577.0","0.71340","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","258.7","227.2","-0.19","11898.3","10451.60","-31.4","0.63830","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","148.1","174.0","0.23","3553.7","4176.21","25.9","0.76020","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","204.9","216.1","0.08","8194.4","8643.40","11.2","0.84460","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","249.3","1671.4","2.74","3988.6","26741.67","1422.1","0.21470","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","126","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","13.2","18.3","0.44","1310.8","1810.91","5.1","0.57820","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","8.1","7.6","-0.08","315.2","296.40","-0.5","0.86400","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","160.0","143.9","-0.15","3199.1","2878.57","-16.0","0.74680","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","65.8","30.7","-1.08","658.4","306.79","-35.2","0.28990","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","103.3","71.9","-0.52","3307.0","2301.14","-31.4","0.49020","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","75.7","37.1","-1.01","3862.1","1891.34","-38.6","0.03970","1.00000"]
["ID=gene-vs.3","hypothetical protein","20","634.0","774.9","0.29","12679.5","15498.03","140.9","0.64280","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","266.6","290.7","0.12","5865.9","6394.67","24.0","0.72710","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","232.3","353.3","0.60","3949.9","6006.55","121.0","0.21130","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","172.3","206.9","0.26","3963.2","4759.52","34.6","0.56700","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","119.5","179.1","0.58","3106.7","4656.50","59.6","0.66530","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","385.7","387.3","0.01","22758.0","22850.11","1.6","0.98270","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","32.9","22.7","-0.52","1711.9","1179.26","-10.2","0.10340","1.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","234.9","243.3","0.05","21841.4","22627.81","8.5","0.87040","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","77.7","116.8","0.58","2407.2","3620.92","39.2","0.34340","1.00000"]
["ID=rnaC","rnaC","11","111.7","240.4","1.10","1229.1","2644.53","128.7","0.16390","1.00000"]
["ID=rnaD","rnaD","7","78.6","78.3","-0.01","550.1","548.06","-0.3","0.99190","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","155.0","216.0","0.48","774.8","1079.86","61.0","0.39540","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","382.9","550.5","0.52","1531.7","2202.19","167.6","0.61200","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","629.9","762.0","0.27","2519.7","3048.01","132.1","0.69760","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","111.3","258.6","1.21","333.8","775.78","147.3","0.29730","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","307.2","307.7","0.00","921.5","923.08","0.5","1.00000","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","328.8","393.9","0.26","1972.7","2363.49","65.1","0.70650","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","102.6","122.7","0.25","205.3","245.34","20.0","1.00000","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","133.6","246.4","0.88","667.9","1232.12","112.8","0.32460","1.00000"]

{"sheet":"Data S24","index":24,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_Control_vs_RexAB"]
[]
["#Resampling"]
["#Console: python3 ../transit/src/transit.py resampling E1_R1_001_fastp_subsampled5M_edited10min.wig Rex1_R1_001_fastp_subsampled5M_edited10min.wig ../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/RexAB-EV"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'E1_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'Rex1_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 4"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.3","2.1","-0.12","161.0","142.99","-0.3","0.86860","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","9342.8","10822.3","0.21","214884.8","248913.17","1479.5","0.72290","1.00000"]
["ID=gene-24.3","hypothetical protein","14","204.6","226.3","0.14","2864.4","3168.02","21.7","0.82310","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.7","3.8","0.02","427.8","436.37","0.1","0.96700","1.00000"]
["ID=gene-30.1","hypothetical protein","21","351.1","372.9","0.09","7373.4","7830.06","21.7","0.78980","1.00000"]
["ID=gene-30.2","hypothetical protein","71","275.1","304.7","0.15","19531.0","21633.13","29.6","0.49250","1.00000"]
["ID=gene-30.3","hypothetical protein","28","266.0","781.6","1.55","7448.5","21883.98","515.6","0.63190","1.00000"]
["ID=gene-30.4","hypothetical protein","21","345.7","375.1","0.12","7259.9","7876.29","29.4","0.75350","1.00000"]
["ID=gene-30.5","hypothetical protein","20","13073.1","9415.0","-0.47","261461.9","188299.86","-3658.1","0.72120","1.00000"]
["ID=gene-30.6","hypothetical protein","21","182.6","189.9","0.06","3834.2","3987.76","7.3","0.90310","1.00000"]
["ID=gene-30.7","hypothetical protein","28","283.5","304.5","0.10","7939.1","8527.15","21.0","0.82340","1.00000"]
["ID=gene-30.8","hypothetical protein","24","240.6","256.3","0.09","5773.8","6151.75","15.7","0.76580","1.00000"]
["ID=gene-30.9","hypothetical protein","5","132.9","153.8","0.21","664.5","769.20","20.9","0.79810","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","2.2","2.8","0.25","41.0","52.39","0.6","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","100.7","166.3","0.72","1711.2","2827.18","65.6","0.12690","1.00000"]
["ID=gene-31.2","hypothetical protein","24","220.3","248.1","0.17","5288.3","5953.29","27.7","0.73880","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","24.2","12.9","-0.86","557.4","297.08","-11.3","0.74080","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","5.0","4.4","-0.14","562.5","500.47","-0.5","0.85520","1.00000"]
["ID=gene-39.1","hypothetical protein","25","255.9","271.2","0.08","6397.9","6781.04","15.3","0.77490","1.00000"]
["ID=gene-39.2","hypothetical protein","11","91.4","102.7","0.17","1005.7","1129.76","11.3","0.67180","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","11.7","10.8","-0.10","315.6","292.15","-0.9","0.83940","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.0","3.7","0.24","169.3","210.79","0.7","0.74460","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.1","0.1","-0.04","8.3","6.78","-0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.1","4.7","0.14","91.1","102.31","0.5","0.84590","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","-0.07","7.1","0.00","-0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","238.3","257.5","0.11","4289.0","4634.31","19.2","0.79710","1.00000"]
["ID=gene-46.2","hypothetical protein","24","230.8","256.3","0.15","5538.4","6151.13","25.5","0.80040","1.00000"]
["ID=gene-47.1","hypothetical protein","12","161.6","168.0","0.06","1939.6","2015.45","6.3","0.93460","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","13.4","12.3","-0.11","442.6","406.79","-1.1","0.86590","1.00000"]
["ID=gene-49.1","hypothetical protein","13","276.9","299.2","0.11","3600.1","3889.76","22.3","0.81320","1.00000"]
["ID=gene-49.2","hypothetical protein","24","244.9","268.4","0.13","5877.7","6440.82","23.5","0.72170","1.00000"]
["ID=gene-49.3","hypothetical protein","23","188.2","185.6","-0.02","4327.5","4268.81","-2.5","0.97000","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.2","0.0","-0.31","10.9","0.00","-0.2","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.2","0.2","0.04","21.2","24.65","0.0","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","264.3","302.1","0.19","3965.1","4530.76","37.7","0.69380","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","188.0","213.8","0.18","3384.0","3847.85","25.8","0.57900","1.00000"]
["ID=gene-55.2","hypothetical protein","23","93.9","94.9","0.02","2158.9","2181.86","1.0","0.98180","1.00000"]
["ID=gene-55.3","hypothetical protein","9","218.4","228.3","0.06","1965.9","2054.90","9.9","0.88720","1.00000"]
["ID=gene-55.4","hypothetical protein","11","155.4","171.0","0.14","1709.3","1881.09","15.6","0.74120","1.00000"]
["ID=gene-55.5","hypothetical protein","25","226.4","234.6","0.05","5660.3","5865.15","8.2","0.87480","1.00000"]
["ID=gene-55.6","hypothetical protein","20","586.8","623.4","0.09","11736.8","12468.06","36.6","0.85270","1.00000"]
["ID=gene-55.8","hypothetical protein","20","403.0","439.3","0.12","8059.1","8785.40","36.3","0.79560","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","11.2","9.9","-0.16","89.8","79.51","-1.3","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","179.7","161.1","-0.16","6288.8","5640.18","-18.5","0.48670","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","11.6","11.5","-0.01","1149.4","1143.32","-0.1","1.00000","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","13.9","11.1","-0.30","877.4","700.17","-2.8","1.00000","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","254.0","236.6","-0.10","7873.7","7334.52","-17.4","0.83170","1.00000"]
["ID=gene-61.1","hypothetical protein","12","116.9","122.0","0.06","1402.7","1463.82","5.1","0.88920","1.00000"]
["ID=gene-61.2","hypothetical protein","58","166.3","180.3","0.12","9647.1","10457.54","14.0","0.63890","1.00000"]
["ID=gene-61.4","hypothetical protein","21","333.2","331.1","-0.01","6996.3","6952.38","-2.1","0.98510","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","3.5","2.9","-0.20","170.0","141.14","-0.6","0.80960","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","48.2","42.5","-0.18","3130.6","2760.61","-5.7","0.54770","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","381.6","418.8","0.13","35110.3","38529.02","37.2","0.62430","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","47.3","38.7","-0.28","898.6","735.92","-8.6","0.42110","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","348.6","389.4","0.16","21959.9","24530.57","40.8","0.65950","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","174.1","74.8","-1.21","16717.8","7184.74","-99.3","0.00000","0.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","223.2","247.9","0.15","4017.7","4462.34","24.7","0.82520","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","34.5","32.2","-0.10","449.0","419.12","-2.3","0.88280","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","34.0","33.3","-0.03","850.5","831.45","-0.8","0.94910","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","18.5","20.6","0.15","443.2","495.54","2.2","0.71250","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","396.4","434.0","0.13","7134.8","7811.57","37.6","0.81950","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","503.2","432.8","-0.22","20126.2","17313.77","-70.3","0.55000","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","206.3","368.2","0.83","36717.0","65545.31","162.0","0.16400","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","163.7","180.2","0.14","2783.0","3063.24","16.5","0.72250","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","184.1","188.7","0.04","3497.5","3584.67","4.6","0.91390","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","201.1","217.7","0.11","3619.4","3918.73","16.6","0.80230","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","188.4","221.5","0.23","3391.7","3987.76","33.1","0.58180","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","220.9","220.6","-0.00","5965.6","5956.98","-0.3","0.99600","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","451.8","451.9","0.00","5421.0","5422.61","0.1","0.99910","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","242.1","247.1","0.03","5083.7","5189.02","5.0","0.94290","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","444.3","463.5","0.06","14662.8","15294.63","19.1","0.86060","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","272.5","277.4","0.03","4359.5","4438.31","4.9","0.93910","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","33.1","21.2","-0.62","727.3","466.57","-11.9","0.50970","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","144.3","142.9","-0.01","1587.4","1571.68","-1.4","0.97440","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","353.2","324.9","-0.12","34613.9","31844.75","-28.3","0.54510","1.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","17.2","13.7","-0.30","669.0","536.22","-3.4","0.54060","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","155.9","154.0","-0.02","4989.4","4927.69","-1.9","0.95090","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","132.2","141.6","0.10","2511.7","2689.73","9.4","0.74940","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","348.3","373.9","0.10","6617.9","7104.62","25.6","0.80570","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","297.1","307.5","0.05","4754.0","4920.29","10.4","0.92890","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","473.1","513.3","0.12","9935.1","10779.89","40.2","0.81620","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","114.6","117.5","0.04","1947.9","1997.58","2.9","0.94530","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","181.5","191.3","0.08","14698.7","15493.70","9.8","0.72540","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","102.0","71.8","-0.50","12749.5","8969.07","-30.2","0.00730","0.35720"]
["ID=gene-dda.1","hypothetical protein","33","178.8","169.8","-0.07","5898.9","5604.43","-8.9","0.82830","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","83.1","67.8","-0.29","3741.2","3051.53","-15.3","0.26810","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","222.2","231.3","0.06","7778.1","8094.47","9.0","0.87250","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","161.4","178.7","0.15","2098.0","2323.01","17.3","0.75890","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","501.6","510.3","0.02","19563.7","19902.43","8.7","0.95400","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","174.8","188.1","0.11","6991.1","7524.97","13.3","0.73710","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","317.1","344.1","0.12","7293.2","7913.88","27.0","0.79100","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","312.7","332.9","0.09","7505.5","7990.31","20.2","0.84650","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","39.9","19.8","-0.98","837.0","414.80","-20.1","0.06580","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","3.1","3.8","0.21","137.9","167.03","0.7","0.74930","1.00000"]
["ID=gene-e.2","hypothetical protein","26","143.8","161.8","0.17","3739.9","4207.18","18.0","0.64220","1.00000"]
["ID=gene-e.3","hypothetical protein","37","235.3","252.6","0.10","8706.9","9347.50","17.3","0.80600","1.00000"]
["ID=gene-e.4","hypothetical protein","42","178.4","184.7","0.05","7490.8","7756.10","6.3","0.88670","1.00000"]
["ID=gene-e.5","hypothetical protein","52","347.1","369.2","0.09","18049.4","19198.56","22.1","0.81440","1.00000"]
["ID=gene-e.6","hypothetical protein","42","416.5","471.6","0.18","17493.3","19808.74","55.1","0.60750","1.00000"]
["ID=gene-e.7","hypothetical protein","29","282.7","308.7","0.13","8199.5","8952.43","26.0","0.75770","1.00000"]
["ID=gene-e.8","hypothetical protein","22","317.7","344.5","0.12","6988.6","7579.82","26.9","0.80860","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","110.7","130.5","0.24","6088.7","7176.12","19.8","0.42210","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","151.8","170.1","0.16","1822.2","2040.72","18.2","0.75640","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","434.2","460.8","0.09","10421.3","11059.71","26.6","0.82860","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","39516.9","35392.0","-0.16","671787.8","601664.60","-4124.9","0.77740","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","111.4","123.9","0.15","3897.7","4335.38","12.5","0.61360","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","10.9","10.4","-0.06","818.4","779.06","-0.5","0.89470","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.3","0.4","0.12","25.7","36.36","0.1","0.72670","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","451.3","510.2","0.18","9026.9","10204.84","58.9","0.70210","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","201.5","234.0","0.21","6246.5","7253.78","32.5","0.51310","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","429.7","494.4","0.20","9882.5","11370.35","64.7","0.57300","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","166.0","183.1","0.14","3652.1","4029.05","17.1","0.77270","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","412.6","426.5","0.05","18567.6","19193.63","13.9","0.94220","1.00000"]
["ID=gene-mobA","homing endonuclease","5","64.0","67.1","0.07","320.1","335.29","3.0","0.88270","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","349.9","369.3","0.08","30437.8","32128.27","19.4","0.81830","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","475.5","492.6","0.05","30428.8","31528.56","17.2","0.84370","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","218.7","239.7","0.13","17712.6","19417.36","21.0","0.47500","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","269.2","300.3","0.16","15880.2","17717.48","31.1","0.52310","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","661.0","727.3","0.14","9254.0","10182.65","66.3","0.72570","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","256.9","280.5","0.13","1798.5","1963.68","23.6","0.85360","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","449.2","482.9","0.10","8535.0","9174.93","33.7","0.85610","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","119.4","111.5","-0.10","2268.0","2118.38","-7.9","0.81970","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","416.6","450.2","0.11","4999.6","5402.27","33.6","0.83790","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","165.7","170.5","0.04","5466.6","5627.86","4.9","0.90050","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","64.9","65.1","0.01","4020.9","4038.30","0.3","0.98300","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","171.6","165.5","-0.05","3088.3","2978.80","-6.1","0.92300","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","130.2","142.1","0.13","6118.2","6678.72","11.9","0.77250","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","183.1","178.9","-0.03","1831.2","1789.25","-4.2","0.93750","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","107.9","117.3","0.12","6259.3","6805.08","9.4","0.67230","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","4.4","3.9","-0.14","234.1","207.71","-0.5","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","379.8","417.3","0.14","3797.7","4173.28","37.6","0.82160","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","246.4","251.0","0.03","10103.8","10289.28","4.5","0.93210","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","251.5","282.6","0.17","7798.0","8761.97","31.1","0.66720","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","240.3","263.8","0.13","13219.0","14508.17","23.4","0.60140","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","392.1","428.2","0.13","21955.4","23977.71","36.1","0.76860","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","493.9","555.6","0.17","15311.9","17224.40","61.7","0.58130","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","101.4","122.4","0.27","1521.4","1836.09","21.0","0.68820","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","255.4","226.1","-0.17","10214.8","9045.49","-29.2","0.50210","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","259.7","279.0","0.10","5194.0","5580.40","19.3","0.79630","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","130.9","139.4","0.09","1047.4","1114.97","8.4","0.90260","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","218.9","236.1","0.11","1751.0","1889.10","17.3","0.80380","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","81.0","86.4","0.09","567.0","604.64","5.4","0.88330","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","409.0","447.1","0.13","7362.5","8047.01","38.0","0.79820","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","440.2","483.7","0.14","3961.9","4353.25","43.5","0.78940","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","171.5","180.3","0.07","1886.3","1982.78","8.8","0.87580","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","1.6","0.4","-0.94","288.0","64.72","-1.2","0.00000","0.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","254.3","272.5","0.10","7628.0","8173.98","18.2","0.84800","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","179.9","190.8","0.08","5217.7","5533.55","10.9","0.78030","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","1.1","0.2","-0.78","39.8","8.01","-0.9","0.17110","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","276.3","302.9","0.13","5803.3","6360.69","26.5","0.84500","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","29.6","22.9","-0.36","563.1","434.52","-6.8","0.51770","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","198.6","216.1","0.12","5562.1","6050.67","17.4","0.77470","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","230.3","260.4","0.18","16122.6","18230.90","30.1","0.64160","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","268.8","295.8","0.14","18280.9","20116.30","27.0","0.57020","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","290.5","306.7","0.08","5810.4","6133.26","16.1","0.83160","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","164.1","174.5","0.09","15429.9","16402.20","10.3","0.75250","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","187.0","201.0","0.10","18703.6","20102.12","14.0","0.66260","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","238.0","249.9","0.07","19275.7","20242.03","11.9","0.80060","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","214.3","226.0","0.08","17357.3","18308.56","11.7","0.73830","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","438.4","493.6","0.17","23235.6","26162.65","55.2","0.63310","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","404.1","433.3","0.10","16566.5","17763.71","29.2","0.78480","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","158.5","166.1","0.07","2695.1","2823.48","7.6","0.83610","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","328.7","364.2","0.15","13149.8","14569.80","35.5","0.60880","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","345.3","385.5","0.16","12430.8","13876.41","40.2","0.61830","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","4605.9","2384.1","-0.95","105936.4","54834.45","-2221.8","0.57880","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","134.6","151.0","0.16","5249.8","5887.95","16.4","0.61100","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","319.8","338.5","0.08","12470.5","13203.36","18.8","0.82870","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","319.8","351.9","0.14","22067.7","24284.03","32.1","0.64680","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","122.8","132.6","0.11","1964.6","2120.85","9.8","0.83740","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.7","1.1","0.33","19.9","32.67","0.4","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.3","0.0","-0.32","7.1","0.00","-0.3","1.00000","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","85.6","122.0","0.51","1969.7","2804.99","36.3","0.50030","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","236.7","291.6","0.30","2604.0","3208.08","54.9","0.43390","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","453.2","661.5","0.54","7250.9","10583.28","208.3","0.46880","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","430.8","0.1","-8.57","83573.1","26.50","-430.7","0.00000","0.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","120.3","108.1","-0.15","2405.9","2161.53","-12.2","0.67840","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","393.7","2.7","-6.75","26773.5","180.59","-391.1","0.00000","0.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","5.7","10.2","0.74","62.9","112.17","4.5","0.40860","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","45.0","28.2","-0.66","1350.8","845.01","-16.9","0.16860","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","219.5","162.1","-0.43","5705.8","4213.96","-57.4","0.30690","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","9.5","6.2","-0.54","739.5","484.45","-3.3","0.06580","1.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","6.0","6.6","0.12","512.5","563.34","0.6","0.79130","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","288.5","300.3","0.06","23948.9","24923.18","11.7","0.79090","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","59.2","36.2","-0.70","1658.0","1012.66","-23.0","0.00760","0.35720"]
["ID=gene-segA","SegA homing endonuclease","62","210.0","222.4","0.08","13020.2","13788.89","12.4","0.79680","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","171.2","194.4","0.18","11129.4","12633.86","23.1","0.47020","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","177.9","188.3","0.08","11565.5","12238.17","10.3","0.73600","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","248.4","262.2","0.08","14902.7","15731.61","13.8","0.74080","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","439.2","487.1","0.15","7026.4","7793.69","48.0","0.80390","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","188.7","237.6","0.33","3962.5","4989.94","48.9","0.38870","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","172.0","197.9","0.20","10662.5","12268.98","25.9","0.45160","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","484.4","545.3","0.17","4359.5","4907.35","60.9","0.73220","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","252.7","267.9","0.08","1516.2","1607.43","15.2","0.88930","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","30.1","26.0","-0.20","1143.6","989.85","-4.0","0.58140","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","136.6","126.7","-0.11","6147.7","5699.97","-10.0","0.72850","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","168.0","178.9","0.09","3528.3","3757.25","10.9","0.78450","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","227.3","243.0","0.10","3636.7","3887.29","15.7","0.84360","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","728.7","806.9","0.15","16759.5","18557.56","78.2","0.72640","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","272.0","297.9","0.13","12514.2","13705.07","25.9","0.75570","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","134.6","144.9","0.11","3230.7","3477.42","10.3","0.84070","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","183.4","195.5","0.09","7336.9","7820.20","12.1","0.76170","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","548.3","219.6","-1.32","8772.3","3513.17","-328.7","0.61770","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","127","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.8","6.9","0.02","668.3","681.06","0.1","0.98010","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.6","0.7","0.08","22.4","25.89","0.1","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","158.8","180.9","0.19","3176.8","3618.57","22.1","0.70050","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","18.5","18.0","-0.04","185.4","179.97","-0.5","0.90070","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","33.9","23.0","-0.54","1085.9","737.15","-10.9","0.24280","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","15.0","22.8","0.58","762.6","1161.20","7.8","0.07070","1.00000"]
["ID=gene-vs.3","hypothetical protein","20","649.7","683.3","0.07","12994.6","13665.01","33.5","0.89560","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","265.3","281.0","0.08","5837.3","6181.33","15.6","0.82400","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","238.3","257.7","0.11","4050.4","4380.99","19.4","0.82170","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","194.4","206.2","0.08","4470.5","4742.78","11.8","0.84820","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","130.4","130.6","0.00","3390.4","3396.07","0.2","0.99590","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","422.8","440.8","0.06","24944.9","26004.25","18.0","0.84440","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","1.3","0.1","-1.01","66.7","6.78","-1.2","0.02780","1.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","280.7","313.3","0.16","26102.0","29138.99","32.7","0.40230","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","26.6","22.0","-0.26","824.2","683.53","-4.5","0.64260","1.00000"]
["ID=rnaC","rnaC","11","96.3","98.9","0.04","1058.9","1087.85","2.6","0.95660","1.00000"]
["ID=rnaD","rnaD","7","61.1","77.0","0.33","427.8","539.30","15.9","0.56790","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","74.0","81.1","0.13","370.1","405.56","7.1","0.70520","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","173.7","180.0","0.05","694.6","719.89","6.3","0.88610","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","374.4","426.0","0.19","1497.6","1704.20","51.6","0.73710","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","81.2","471.9","2.52","243.7","1415.75","390.7","0.59310","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","200.1","203.8","0.03","600.3","611.42","3.7","0.69740","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","195.8","212.5","0.12","1175.0","1275.22","16.7","0.81250","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","51.3","64.4","0.32","102.6","128.82","13.1","0.66810","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","91.3","107.0","0.23","456.7","534.99","15.7","0.75260","1.00000"]

{"sheet":"Data S25","index":25,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_Control_vs_RnlAB"]
[]
["#Resampling"]
["#Console: python3 ../../transit/src/transit.py resampling ../T4_delrnlA_merged_fastp_subsampled5M_edited10min.wig ../T4_BW_2_merged_fastp_subsampled5M_edited10min.wig ../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR T4delrnla_BW"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'../T4_delrnlA_merged_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'../T4_BW_2_merged_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 1"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","1.6","2.2","0.31","107.4","149.22","0.6","0.80550","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","193.2","206.6","0.10","4443.8","4751.85","13.4","0.80810","1.00000"]
["ID=gene-24.3","hypothetical protein","14","177.3","184.8","0.06","2481.8","2587.24","7.5","0.88070","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","4.3","3.4","-0.26","498.1","396.68","-0.9","0.74540","1.00000"]
["ID=gene-30.1","hypothetical protein","21","277.5","268.9","-0.05","5828.5","5647.63","-8.6","0.91220","1.00000"]
["ID=gene-30.2","hypothetical protein","71","398.6","405.1","0.02","28301.8","28763.20","6.5","0.94520","1.00000"]
["ID=gene-30.3","hypothetical protein","28","408.2","404.9","-0.01","11430.0","11336.04","-3.4","0.98000","1.00000"]
["ID=gene-30.4","hypothetical protein","21","504.9","496.3","-0.02","10602.1","10423.11","-8.5","0.95930","1.00000"]
["ID=gene-30.5","hypothetical protein","20","292.3","275.9","-0.08","5846.7","5518.34","-16.4","0.85000","1.00000"]
["ID=gene-30.6","hypothetical protein","21","255.6","255.5","-0.00","5366.8","5365.87","-0.0","0.99960","1.00000"]
["ID=gene-30.7","hypothetical protein","28","349.5","355.9","0.03","9786.6","9966.19","6.4","0.94810","1.00000"]
["ID=gene-30.8","hypothetical protein","24","4115.0","4359.6","0.08","98761.0","104630.61","244.6","0.72710","1.00000"]
["ID=gene-30.9","hypothetical protein","5","302.3","308.9","0.03","1511.4","1544.56","6.6","0.96210","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","2.3","2.8","0.19","44.6","53.76","0.5","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","181.0","164.1","-0.14","3077.4","2789.75","-16.9","0.75320","1.00000"]
["ID=gene-31.2","hypothetical protein","24","342.2","330.3","-0.05","8212.4","7928.09","-11.8","0.91790","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","5.1","6.3","0.27","116.2","145.05","1.3","0.79820","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","4.6","4.5","-0.04","524.5","507.44","-0.2","0.94370","1.00000"]
["ID=gene-39.1","hypothetical protein","25","295.3","292.2","-0.02","7383.3","7303.87","-3.2","0.96040","1.00000"]
["ID=gene-39.2","hypothetical protein","11","125.2","131.9","0.08","1377.0","1451.41","6.8","0.90080","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","3.2","3.1","-0.02","85.1","83.88","-0.0","1.00000","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.1","0.1","0.02","7.0","8.34","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","6.0","5.6","-0.08","343.8","321.61","-0.4","0.90780","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.1","0.1","0.00","10.0","10.20","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","6.3","5.4","-0.21","139.1","117.71","-1.0","0.68320","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","321.7","327.5","0.03","5791.0","5894.17","5.7","0.96070","1.00000"]
["ID=gene-46.2","hypothetical protein","24","308.8","283.3","-0.12","7410.9","6799.21","-25.5","0.83880","1.00000"]
["ID=gene-47.1","hypothetical protein","12","152.6","149.6","-0.03","1831.8","1794.80","-3.1","0.97010","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","7.3","10.6","0.49","240.0","350.80","3.4","1.00000","1.00000"]
["ID=gene-49.1","hypothetical protein","13","296.6","288.1","-0.04","3856.0","3744.85","-8.5","0.93680","1.00000"]
["ID=gene-49.2","hypothetical protein","24","328.7","349.3","0.09","7889.1","8382.24","20.5","0.78320","1.00000"]
["ID=gene-49.3","hypothetical protein","23","247.9","245.7","-0.01","5701.8","5650.41","-2.2","0.97420","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.5","0.2","-0.32","21.1","7.88","-0.3","0.49760","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.9","0.7","-0.11","86.2","72.29","-0.1","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","369.5","335.9","-0.14","5542.2","5038.24","-33.6","0.82080","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","294.9","284.1","-0.05","5308.1","5113.31","-10.8","0.91520","1.00000"]
["ID=gene-55.2","hypothetical protein","23","71.8","80.1","0.16","1651.0","1843.00","8.3","0.83830","1.00000"]
["ID=gene-55.3","hypothetical protein","9","276.0","263.4","-0.07","2483.6","2370.36","-12.6","0.89120","1.00000"]
["ID=gene-55.4","hypothetical protein","11","187.8","182.7","-0.04","2065.9","2009.83","-5.1","0.90050","1.00000"]
["ID=gene-55.5","hypothetical protein","25","230.2","238.2","0.05","5754.0","5954.87","8.0","0.90690","1.00000"]
["ID=gene-55.6","hypothetical protein","20","485.4","511.6","0.08","9707.4","10231.26","26.2","0.87150","1.00000"]
["ID=gene-55.8","hypothetical protein","20","207.3","188.3","-0.14","4147.0","3765.24","-19.1","0.76250","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","6.0","8.7","0.47","48.1","69.51","2.7","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","125.7","113.0","-0.15","4398.7","3953.85","-12.7","0.49280","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","6.1","6.1","0.01","599.6","602.44","0.0","0.98230","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","7.4","7.2","-0.04","468.8","453.22","-0.2","1.00000","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","231.9","233.1","0.01","7189.1","7226.48","1.2","0.98950","1.00000"]
["ID=gene-61.1","hypothetical protein","12","296.0","289.2","-0.03","3551.4","3470.05","-6.8","0.94230","1.00000"]
["ID=gene-61.2","hypothetical protein","58","176.6","176.3","-0.00","10243.0","10224.77","-0.3","0.99330","1.00000"]
["ID=gene-61.4","hypothetical protein","21","873.3","859.5","-0.02","18338.7","18049.06","-13.8","0.95750","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","2.1","2.7","0.23","104.4","131.15","0.5","0.78420","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","134.9","200.9","0.57","8766.2","13059.48","66.0","0.50510","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","413.8","401.6","-0.04","38070.2","36942.93","-12.3","0.92600","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","35.7","50.5","0.49","678.3","960.19","14.8","0.53450","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","445.9","452.4","0.02","28094.7","28502.76","6.5","0.96280","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","22.5","11.8","-0.87","2157.4","1136.29","-10.6","0.00580","0.54520"]
["ID=gene-a-gt.2","hypothetical protein","18","126.8","144.2","0.18","2281.8","2596.05","17.5","0.67440","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","42.5","52.0","0.28","552.7","675.66","9.5","0.75670","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","42.5","52.2","0.29","1063.7","1305.90","9.7","0.54640","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","13.6","12.4","-0.13","326.2","296.59","-1.2","0.78820","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","392.5","391.2","-0.00","7064.2","7042.04","-1.2","0.99310","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","446.2","348.7","-0.35","17848.2","13949.70","-97.5","0.26460","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","184.6","179.5","-0.04","32861.3","31948.71","-5.1","0.86070","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","142.2","134.5","-0.08","2417.9","2286.02","-7.8","0.81440","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","194.6","198.5","0.03","3697.5","3772.19","3.9","0.94530","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","312.5","298.1","-0.07","5625.5","5364.95","-14.5","0.90940","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","211.6","195.0","-0.12","3809.6","3509.44","-16.7","0.76600","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","246.1","298.5","0.28","6645.2","8059.24","52.4","0.48900","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","426.3","490.7","0.20","5115.1","5888.61","64.5","0.70610","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","295.7","328.3","0.15","6209.9","6893.29","32.5","0.70240","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","447.0","495.5","0.15","14750.2","16351.57","48.5","0.70170","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","278.8","319.9","0.20","4460.3","5118.41","41.1","0.60680","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","8.0","6.8","-0.19","175.4","150.61","-1.1","0.84940","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","158.8","173.3","0.12","1747.3","1906.02","14.4","0.83410","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","272.3","289.0","0.09","26681.3","28321.10","16.7","0.66190","1.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","13.8","14.1","0.03","537.4","551.00","0.3","0.94480","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","230.5","187.1","-0.30","7376.3","5987.78","-43.4","0.31970","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","187.8","174.1","-0.11","3567.3","3308.78","-13.6","0.72990","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","336.7","349.2","0.05","6396.5","6634.70","12.5","0.90770","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","324.3","333.5","0.04","5189.0","5335.29","9.1","0.94880","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","510.0","531.9","0.06","10710.1","11170.14","21.9","0.89010","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","321.0","373.5","0.22","5457.7","6349.24","52.4","0.80160","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","288.5","277.5","-0.06","23366.3","22476.98","-11.0","0.91820","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","65.1","101.5","0.63","8137.9","12692.92","36.4","0.00330","0.46530"]
["ID=gene-dda.1","hypothetical protein","33","142.5","154.3","0.11","4703.8","5092.92","11.8","0.78000","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","40.1","28.8","-0.47","1805.9","1294.78","-11.4","0.07990","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","180.9","183.6","0.02","6331.3","6426.17","2.7","0.96350","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","185.9","182.7","-0.02","2416.1","2375.00","-3.2","0.97000","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","415.6","427.4","0.04","16208.3","16666.70","11.8","0.89820","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","169.9","153.2","-0.15","6794.9","6128.19","-16.7","0.55100","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","323.8","310.3","-0.06","7448.5","7137.97","-13.5","0.86060","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","440.4","435.3","-0.02","10568.7","10448.14","-5.0","0.98170","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","358.0","20.5","-4.06","5369.7","307.71","-337.5","0.00000","0.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","17.8","20.0","0.16","374.3","419.85","2.2","0.76890","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","3.6","3.2","-0.11","157.2","142.27","-0.3","0.74980","1.00000"]
["ID=gene-e.2","hypothetical protein","26","161.3","158.1","-0.03","4193.9","4110.48","-3.2","0.92610","1.00000"]
["ID=gene-e.3","hypothetical protein","37","159.2","163.9","0.04","5889.5","6064.24","4.7","0.92640","1.00000"]
["ID=gene-e.4","hypothetical protein","42","159.7","160.3","0.00","6708.6","6730.63","0.5","0.98920","1.00000"]
["ID=gene-e.5","hypothetical protein","52","172.3","172.0","-0.00","8958.7","8942.04","-0.3","0.99440","1.00000"]
["ID=gene-e.6","hypothetical protein","42","340.5","334.5","-0.03","14302.6","14049.80","-6.0","0.93870","1.00000"]
["ID=gene-e.7","hypothetical protein","29","241.7","253.7","0.07","7010.2","7358.56","12.0","0.87200","1.00000"]
["ID=gene-e.8","hypothetical protein","22","440.9","428.0","-0.04","9699.7","9417.04","-12.8","0.91250","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","195.3","190.7","-0.03","10741.7","10489.85","-4.6","0.93940","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","139.5","144.5","0.05","1673.9","1734.10","5.0","0.92540","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","325.8","332.9","0.03","7818.1","7989.26","7.1","0.95310","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","210.7","221.4","0.07","3582.5","3763.39","10.6","0.86130","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","216.3","238.7","0.14","7569.9","8355.82","22.5","0.76330","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","7.0","7.7","0.12","525.7","576.95","0.7","0.86530","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.6","0.6","0.04","59.3","63.95","0.0","0.96860","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","504.1","439.8","-0.20","10082.9","8796.53","-64.3","0.72400","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","226.6","211.8","-0.10","7025.4","6565.65","-14.8","0.79970","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","430.2","425.0","-0.02","9894.5","9773.87","-5.2","0.96550","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","163.8","172.1","0.07","3603.1","3787.02","8.4","0.88660","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","294.1","280.9","-0.07","13235.3","12638.70","-13.3","0.89570","1.00000"]
["ID=gene-mobA","homing endonuclease","5","18.8","24.3","0.35","93.9","121.41","5.5","0.67930","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","339.2","343.3","0.02","29506.4","29867.05","4.1","0.94380","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","405.7","413.1","0.03","25963.1","26438.71","7.4","0.92130","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","241.3","255.1","0.08","19547.9","20665.96","13.8","0.77100","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","271.2","267.8","-0.02","16003.5","15802.43","-3.4","0.94030","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","614.9","623.4","0.02","8608.4","8727.48","8.5","0.95680","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","224.5","231.4","0.04","1571.2","1619.63","6.9","0.94160","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","318.3","324.0","0.03","6048.0","6156.00","5.7","0.94780","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","50.4","48.2","-0.06","956.9","916.63","-2.1","0.90180","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","387.2","384.7","-0.01","4646.3","4616.53","-2.5","0.98940","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","199.1","194.6","-0.03","6570.7","6420.61","-4.5","0.94160","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","52.4","61.6","0.23","3245.8","3816.68","9.2","0.62070","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","102.3","107.8","0.07","1841.1","1940.32","5.5","0.88400","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","108.3","98.7","-0.13","5089.2","4639.70","-9.6","0.68890","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","133.1","124.1","-0.10","1330.7","1240.56","-9.0","0.86090","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","86.6","94.5","0.12","5023.5","5482.19","7.9","0.73260","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","5.9","8.4","0.45","311.6","445.34","2.5","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","317.4","326.5","0.04","3173.6","3265.22","9.2","0.94210","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","370.1","357.9","-0.05","15173.9","14673.55","-12.2","0.85870","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","371.6","362.4","-0.04","11519.2","11233.16","-9.2","0.92290","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","315.0","320.9","0.03","17327.7","17647.28","5.8","0.90490","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","319.4","315.9","-0.02","17886.3","17690.84","-3.5","0.96500","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","533.8","549.2","0.04","16548.6","17023.99","15.3","0.92590","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","104.3","84.1","-0.31","1564.2","1261.88","-20.2","0.55800","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","306.7","294.6","-0.06","12269.0","11785.55","-12.1","0.85340","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","260.1","251.2","-0.05","5201.3","5024.80","-8.8","0.90620","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","233.9","231.1","-0.02","1871.1","1848.56","-2.8","0.97350","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","334.4","324.6","-0.04","2675.5","2596.51","-9.9","0.93090","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","144.0","138.6","-0.05","1008.0","970.39","-5.4","0.88680","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","446.8","460.1","0.04","8041.6","8282.14","13.4","0.91250","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","440.0","446.5","0.02","3959.8","4018.73","6.5","0.97490","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","189.2","186.2","-0.02","2081.1","2048.29","-3.0","0.97040","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.0","0.3","0.27","7.0","45.41","0.2","0.05010","1.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","244.4","254.8","0.06","7332.3","7644.95","10.4","0.86120","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","641.8","644.4","0.01","18610.9","18688.11","2.7","0.98770","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","385.6","382.2","-0.01","8097.4","8026.80","-3.4","0.97430","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","52.4","60.5","0.20","996.3","1149.73","8.1","0.67020","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","244.6","259.6","0.09","6848.8","7267.73","15.0","0.82210","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","206.6","216.6","0.07","14460.4","15161.06","10.0","0.83560","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","253.3","252.2","-0.01","17221.5","17152.35","-1.0","0.97120","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","148.0","150.6","0.03","2959.4","3011.73","2.6","0.95070","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","177.8","180.6","0.02","16710.5","16977.65","2.8","0.93250","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","149.1","147.2","-0.02","14907.5","14717.11","-1.9","0.93040","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","256.3","239.3","-0.10","20760.7","19379.99","-17.0","0.74230","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","311.1","308.1","-0.01","25196.9","24953.01","-3.0","0.95230","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","426.3","420.7","-0.02","22591.8","22298.11","-5.5","0.94920","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","399.5","347.9","-0.20","16380.2","14264.82","-51.6","0.68840","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","155.4","158.1","0.02","2642.0","2686.88","2.6","0.96290","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","320.2","302.2","-0.08","12810.0","12086.77","-18.1","0.86170","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","350.3","360.2","0.04","12611.6","12967.72","9.9","0.93410","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","403.6","319.8","-0.33","9282.6","7355.78","-83.8","0.63350","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","133.3","144.1","0.11","5197.2","5618.90","10.8","0.85190","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","477.8","467.0","-0.03","18635.5","18211.26","-10.9","0.91700","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","357.2","321.9","-0.15","24649.5","22208.67","-35.4","0.62910","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","70.3","70.1","-0.00","1124.8","1121.00","-0.2","0.99050","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","1.0","0.2","-0.69","28.7","6.49","-0.7","0.23830","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.3","0.0","-0.35","7.6","0.00","-0.3","1.00000","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","58.0","46.2","-0.32","1333.0","1062.61","-11.8","0.69590","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","173.4","126.4","-0.45","1907.4","1390.71","-47.0","0.49920","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","5594.5","3868.6","-0.53","89511.2","61896.86","-1725.9","0.60630","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","466.3","504.3","0.11","90465.3","97836.96","38.0","0.72620","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","127.7","137.6","0.11","2553.4","2752.22","9.9","0.75090","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","504.9","500.5","-0.01","34335.7","34030.83","-4.5","0.96600","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","3.8","3.8","0.01","41.7","42.17","0.0","0.97360","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","27.4","21.7","-0.32","821.4","649.71","-5.7","0.63510","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","211.2","182.2","-0.21","5491.7","4738.41","-29.0","0.69150","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","4.8","5.5","0.17","370.8","428.19","0.7","0.78500","1.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","2.0","1.8","-0.11","173.1","154.32","-0.2","0.82920","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","294.4","290.4","-0.02","24438.8","24104.03","-4.0","0.94060","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","20.5","19.2","-0.09","573.2","537.10","-1.3","0.84350","1.00000"]
["ID=gene-segA","SegA homing endonuclease","62","287.2","312.1","0.12","17805.3","19349.86","24.9","0.70160","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","297.9","301.1","0.02","19360.7","19573.69","3.3","0.97360","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","391.9","177.4","-1.14","25470.3","11528.82","-214.5","0.55460","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","323.6","344.7","0.09","19417.6","20684.50","21.1","0.79160","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","264.1","233.9","-0.17","4225.0","3743.00","-30.1","0.76220","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","193.5","135.2","-0.51","4063.7","2839.80","-58.3","0.16350","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","415.8","476.2","0.20","25776.6","29525.05","60.5","0.72780","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","429.2","421.4","-0.03","3862.4","3793.05","-7.7","0.94390","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","168.3","166.9","-0.01","1009.8","1001.44","-1.4","0.98970","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","50.8","66.7","0.39","1929.7","2536.27","16.0","0.36290","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","125.0","115.8","-0.11","5626.7","5212.02","-9.2","0.72740","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","129.4","130.2","0.01","2717.7","2734.61","0.8","0.98290","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","248.3","214.2","-0.21","3973.3","3426.95","-34.1","0.73060","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","12996.8","1531.7","-3.08","298926.7","35229.22","-11465.1","0.36390","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","248.7","243.7","-0.03","11439.4","11208.14","-5.0","0.93890","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","148.8","145.1","-0.04","3572.0","3483.02","-3.7","0.90990","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","187.1","187.5","0.00","7484.3","7501.75","0.4","0.99280","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","1798.6","1944.1","0.11","28778.2","31106.22","145.5","0.78000","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","126","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.3","7.3","0.18","623.7","717.83","1.0","0.85950","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.4","0.3","-0.06","15.8","13.44","-0.1","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","128.2","117.6","-0.12","2564.0","2351.83","-10.6","0.78110","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","5.6","5.7","0.03","55.7","57.00","0.1","1.00000","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","8.9","11.0","0.28","284.6","351.27","2.1","0.66610","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","5.1","5.7","0.13","258.7","288.71","0.6","0.76480","1.00000"]
["ID=gene-vs.3","hypothetical protein","20","671.8","675.2","0.01","13435.4","13503.89","3.4","0.99180","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","272.7","279.2","0.03","5998.7","6142.56","6.5","0.92650","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","362.5","365.0","0.01","6163.0","6205.58","2.5","0.98350","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","194.0","193.7","-0.00","4462.6","4455.73","-0.3","0.99620","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","175.7","164.6","-0.09","4567.6","4280.56","-11.0","0.83060","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","380.0","380.3","0.00","22417.6","22437.13","0.3","0.99580","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.0","0.3","0.39","0.0","16.22","0.3","0.24490","1.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","270.9","273.5","0.01","25192.8","25437.27","2.6","0.95910","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","39.5","54.4","0.45","1224.5","1686.36","14.9","0.44770","1.00000"]
["ID=rnaC","rnaC","11","156.5","175.0","0.16","1721.4","1924.56","18.5","0.80730","1.00000"]
["ID=rnaD","rnaD","7","42.1","52.8","0.32","294.5","369.34","10.7","0.77310","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","91.3","120.6","0.40","456.5","602.90","29.3","0.53900","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","155.9","246.4","0.66","623.7","985.68","90.5","0.63520","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","336.5","443.3","0.40","1345.9","1773.02","106.8","0.45570","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","140.6","167.4","0.25","421.9","502.34","26.8","0.56860","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","158.2","195.3","0.30","474.7","585.76","37.0","0.69680","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","220.3","260.4","0.24","1321.9","1562.17","40.0","0.61690","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","82.1","109.4","0.41","164.3","218.73","27.2","0.66950","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","131.1","153.5","0.23","655.4","767.41","22.4","0.64380","1.00000"]

{"sheet":"Data S26","index":26,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_Control_vs_DarTG1"]
[]
["#Resampling"]
["#Console: python3 ../transit/src/transit.py resampling LB_EV_R1_L2_R1_fastp_subsampled5M_edited10min.wig darTG1_R1_L2_R1_fastp_subsampled5M_edited10min.wig ../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/darTG1-LB_EV"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'LB_EV_R1_L2_R1_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'darTG1_R1_L2_R1_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 2"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.1","2.4","0.11","145.5","163.01","0.3","0.87670","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","2388.5","812.0","-1.56","54935.5","18675.97","-1576.5","0.77790","1.00000"]
["ID=gene-24.3","hypothetical protein","14","256.9","201.4","-0.35","3596.5","2819.60","-55.5","0.67590","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.5","3.7","0.06","404.7","427.50","0.2","0.92200","1.00000"]
["ID=gene-30.1","hypothetical protein","21","331.1","329.9","-0.01","6953.5","6927.80","-1.2","0.98810","1.00000"]
["ID=gene-30.2","hypothetical protein","71","271.5","249.8","-0.12","19276.4","17737.36","-21.7","0.61200","1.00000"]
["ID=gene-30.3","hypothetical protein","28","261.0","0.7","-7.25","7308.3","20.20","-260.3","0.00000","0.00000"]
["ID=gene-30.4","hypothetical protein","21","375.9","108.0","-1.79","7892.9","2267.61","-267.9","0.00010","0.01410"]
["ID=gene-30.5","hypothetical protein","20","7390.9","925.9","-3.00","147818.9","18518.59","-6465.0","0.64040","1.00000"]
["ID=gene-30.6","hypothetical protein","21","191.3","154.8","-0.30","4016.8","3250.38","-36.5","0.50040","1.00000"]
["ID=gene-30.7","hypothetical protein","28","287.9","251.5","-0.19","8061.4","7043.36","-36.4","0.67590","1.00000"]
["ID=gene-30.8","hypothetical protein","24","244.3","240.5","-0.02","5863.8","5772.61","-3.8","0.94130","1.00000"]
["ID=gene-30.9","hypothetical protein","5","114.0","140.3","0.30","570.1","701.38","26.3","0.73050","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","3.0","3.8","0.26","56.4","71.41","0.8","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","121.0","120.3","-0.01","2056.4","2045.41","-0.6","0.98490","1.00000"]
["ID=gene-31.2","hypothetical protein","24","206.4","212.7","0.04","4953.4","5104.12","6.3","0.93310","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","9.3","10.0","0.09","214.2","229.72","0.7","1.00000","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","3.8","4.6","0.21","433.2","516.75","0.7","0.83490","1.00000"]
["ID=gene-39.1","hypothetical protein","25","287.5","268.4","-0.10","7186.5","6711.23","-19.0","0.74830","1.00000"]
["ID=gene-39.2","hypothetical protein","11","86.1","85.1","-0.02","946.9","936.26","-1.0","0.96700","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","7.5","7.4","-0.02","203.4","200.12","-0.1","0.95940","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.2","3.7","0.16","183.6","212.34","0.5","0.83690","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.6","4.8","0.04","100.9","104.76","0.2","0.94760","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","237.7","245.0","0.04","4278.2","4410.26","7.3","0.92030","1.00000"]
["ID=gene-46.2","hypothetical protein","24","278.9","244.6","-0.19","6693.2","5871.27","-34.2","0.80980","1.00000"]
["ID=gene-47.1","hypothetical protein","12","136.2","150.4","0.14","1634.5","1805.35","14.2","0.83090","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","11.9","11.7","-0.02","392.9","386.16","-0.2","0.92540","1.00000"]
["ID=gene-49.1","hypothetical protein","13","286.6","267.2","-0.10","3725.8","3473.53","-19.4","0.85530","1.00000"]
["ID=gene-49.2","hypothetical protein","24","248.2","233.8","-0.09","5956.2","5611.01","-14.4","0.80960","1.00000"]
["ID=gene-49.3","hypothetical protein","23","175.8","177.8","0.02","4044.1","4090.34","2.0","0.97130","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.1","0.2","0.02","14.5","16.44","0.0","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","255.4","257.4","0.01","3831.6","3861.09","2.0","0.98020","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.1","0.11","0.0","6.58","0.1","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.1","0.1","-0.02","7.0","6.11","-0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","231.9","248.7","0.10","4174.0","4476.50","16.8","0.75830","1.00000"]
["ID=gene-55.2","hypothetical protein","23","92.2","104.1","0.17","2119.8","2394.92","12.0","0.79380","1.00000"]
["ID=gene-55.3","hypothetical protein","9","209.9","344.6","0.71","1889.5","3101.47","134.7","0.41230","1.00000"]
["ID=gene-55.4","hypothetical protein","11","158.6","163.0","0.04","1744.5","1792.67","4.4","0.92080","1.00000"]
["ID=gene-55.5","hypothetical protein","25","221.3","224.4","0.02","5533.7","5609.60","3.0","0.95750","1.00000"]
["ID=gene-55.6","hypothetical protein","20","599.9","623.7","0.06","11997.7","12473.51","23.8","0.90490","1.00000"]
["ID=gene-55.8","hypothetical protein","20","380.1","390.7","0.04","7602.5","7814.26","10.6","0.92770","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","5.3","7.8","0.48","42.4","62.48","2.5","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","102.0","128.6","0.33","3570.7","4501.87","26.6","0.16260","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","12.4","8.8","-0.45","1230.3","873.78","-3.6","0.69720","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","10.1","10.3","0.02","637.2","646.41","0.1","1.00000","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","204.7","203.2","-0.01","6344.8","6300.17","-1.4","0.98750","1.00000"]
["ID=gene-61.1","hypothetical protein","12","118.5","121.0","0.03","1421.4","1451.61","2.5","0.93910","1.00000"]
["ID=gene-61.2","hypothetical protein","58","209.5","165.8","-0.34","12151.2","9613.98","-43.7","0.57510","1.00000"]
["ID=gene-61.4","hypothetical protein","21","329.2","300.5","-0.13","6912.7","6310.98","-28.7","0.75060","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","2.7","3.7","0.34","134.2","183.21","1.0","0.68400","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","62.2","67.5","0.12","4041.4","4385.36","5.3","0.69180","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","381.9","386.9","0.02","35132.5","35592.15","5.0","0.94940","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","44.6","43.3","-0.04","846.5","823.52","-1.2","0.90420","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","409.6","356.3","-0.20","25806.4","22445.46","-53.3","0.61140","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","101.8","123.2","0.27","9771.6","11828.04","21.4","0.11920","1.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","167.2","182.6","0.13","3009.7","3286.56","15.4","0.84800","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","24.2","30.2","0.31","315.1","393.20","6.0","0.65940","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","24.7","27.7","0.16","618.4","693.39","3.0","0.73760","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","13.1","16.3","0.30","314.0","391.32","3.2","0.46450","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","395.5","398.6","0.01","7118.8","7175.37","3.1","0.98600","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","607.1","586.3","-0.05","24285.7","23453.60","-20.8","0.89000","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","211.0","210.0","-0.01","37563.0","37388.11","-1.0","0.96910","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","163.5","167.7","0.04","2779.5","2850.60","4.2","0.92350","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","163.9","169.1","0.04","3114.4","3213.27","5.2","0.89240","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","207.1","201.8","-0.04","3728.5","3632.31","-5.3","0.93670","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","201.2","204.2","0.02","3621.7","3676.00","3.0","0.95860","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","266.9","313.4","0.23","7206.3","8463.03","46.5","0.53200","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","422.0","463.8","0.14","5064.6","5565.44","41.7","0.81280","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","256.8","263.6","0.04","5392.5","5534.91","6.8","0.93620","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","410.4","457.6","0.16","13542.5","15101.91","47.3","0.64580","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","221.5","251.7","0.18","3543.3","4027.86","30.3","0.59770","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","18.6","23.6","0.33","409.0","520.04","5.0","0.70650","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","119.1","136.7","0.20","1309.8","1503.75","17.6","0.67370","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","403.6","405.9","0.01","39554.0","39782.56","2.3","0.96880","1.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","11.8","12.5","0.07","461.6","488.10","0.7","0.87990","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","138.4","142.7","0.04","4429.0","4565.76","4.3","0.88500","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","122.3","133.1","0.12","2323.7","2528.81","10.8","0.69290","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","274.5","297.1","0.11","5215.9","5644.84","22.6","0.79520","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","267.5","271.1","0.02","4279.2","4337.45","3.6","0.97070","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","577.6","477.1","-0.28","12129.2","10019.87","-100.4","0.64030","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","92.3","93.9","0.03","1568.5","1596.30","1.6","0.95830","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","196.9","202.8","0.04","15948.9","16422.92","5.9","0.84980","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","70.1","74.3","0.08","8765.7","9293.59","4.2","0.75960","1.00000"]
["ID=gene-dda.1","hypothetical protein","33","81.9","91.8","0.16","2704.3","3029.59","9.9","0.61800","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","43.4","54.9","0.33","1952.8","2471.96","11.5","0.19800","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","185.8","158.0","-0.23","6504.7","5531.15","-27.8","0.52840","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","161.4","170.7","0.08","2098.3","2219.22","9.3","0.86890","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","477.7","475.3","-0.01","18631.8","18535.98","-2.5","0.98450","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","101.3","122.0","0.27","4050.0","4880.98","20.8","0.35250","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","337.4","310.8","-0.12","7760.8","7149.53","-26.6","0.79720","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","322.8","324.5","0.01","7747.4","7788.43","1.7","0.98590","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","14.7","16.5","0.16","308.1","347.16","1.9","0.74770","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","3.5","3.5","0.01","152.4","153.15","0.0","1.00000","1.00000"]
["ID=gene-e.2","hypothetical protein","26","149.6","142.0","-0.07","3889.0","3692.44","-7.6","0.83820","1.00000"]
["ID=gene-e.3","hypothetical protein","37","236.9","238.1","0.01","8766.8","8809.25","1.1","0.98840","1.00000"]
["ID=gene-e.4","hypothetical protein","42","186.5","178.8","-0.06","7834.9","7510.32","-7.7","0.85660","1.00000"]
["ID=gene-e.5","hypothetical protein","52","344.2","348.2","0.02","17897.4","18105.19","4.0","0.96350","1.00000"]
["ID=gene-e.6","hypothetical protein","42","429.7","426.6","-0.01","18047.2","17919.16","-3.0","0.97400","1.00000"]
["ID=gene-e.7","hypothetical protein","29","304.9","313.6","0.04","8841.4","9094.41","8.7","0.92090","1.00000"]
["ID=gene-e.8","hypothetical protein","22","317.0","314.2","-0.01","6974.4","6912.76","-2.8","0.97840","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","223.3","209.0","-0.09","12278.9","11497.31","-14.2","0.75710","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","145.3","156.5","0.11","1744.0","1878.17","11.2","0.82870","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","430.9","437.6","0.02","10340.6","10503.27","6.8","0.94720","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","7996.6","2122.0","-1.91","135942.1","36074.62","-5874.6","0.78910","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","117.2","117.3","0.00","4101.0","4104.91","0.1","0.99680","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","7.4","8.4","0.16","555.6","627.15","1.0","0.84330","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.2","0.2","-0.01","23.1","22.08","-0.0","0.90380","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","502.1","504.8","0.01","10041.1","10096.44","2.8","0.98810","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","228.0","225.3","-0.02","7068.4","6983.23","-2.7","0.96130","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","541.8","417.1","-0.38","12460.9","9593.78","-124.7","0.54070","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","159.3","156.9","-0.02","3504.7","3451.45","-2.4","0.96580","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","331.3","337.6","0.03","14909.2","15193.98","6.3","0.96900","1.00000"]
["ID=gene-mobA","homing endonuclease","5","64.8","65.2","0.01","324.2","326.02","0.4","0.98900","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","342.7","350.6","0.03","29813.5","30504.00","7.9","0.92650","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","444.2","439.8","-0.01","28430.7","28146.67","-4.4","0.95430","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","245.6","247.4","0.01","19891.6","20040.20","1.8","0.95410","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","285.7","303.1","0.09","16853.9","17881.58","17.4","0.73010","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","697.1","717.9","0.04","9759.8","10050.87","20.8","0.90740","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","285.9","305.9","0.10","2001.1","2141.24","20.0","0.88880","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","479.3","478.0","-0.00","9106.0","9081.25","-1.3","0.99320","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","101.0","94.3","-0.10","1918.5","1791.26","-6.7","0.82970","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","467.1","453.4","-0.04","5605.6","5440.95","-13.7","0.93920","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","170.1","168.1","-0.02","5614.2","5546.18","-2.1","0.96010","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","71.0","76.4","0.11","4400.0","4737.70","5.4","0.70880","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","149.9","154.4","0.04","2698.9","2779.20","4.5","0.94000","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","127.8","127.5","-0.00","6007.1","5992.94","-0.3","0.99330","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","187.9","172.1","-0.13","1878.7","1721.26","-15.7","0.79300","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","112.3","122.8","0.13","6515.5","7121.81","10.5","0.67010","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","2.6","3.4","0.29","136.9","178.98","0.8","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","399.5","410.4","0.04","3994.7","4104.44","11.0","0.94500","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","223.9","227.5","0.02","9177.9","9328.82","3.7","0.94060","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","263.6","258.6","-0.03","8172.5","8016.27","-5.0","0.94030","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","322.7","256.0","-0.33","17746.6","14082.02","-66.6","0.44520","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","579.4","434.8","-0.41","32443.7","24346.17","-144.6","0.51030","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","538.9","554.5","0.04","16706.9","17189.60","15.6","0.88480","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","124.0","116.2","-0.09","1860.0","1742.40","-7.8","0.88090","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","194.6","195.4","0.01","7785.5","7817.08","0.8","0.98160","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","260.0","242.6","-0.10","5200.9","4852.32","-17.4","0.81500","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","133.1","134.1","0.01","1065.0","1072.50","0.9","0.98910","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","232.0","242.8","0.06","1856.2","1942.06","10.7","0.87320","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","82.1","88.4","0.10","574.9","618.70","6.3","0.87890","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","391.5","386.7","-0.02","7046.4","6959.74","-4.8","0.97270","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","473.7","483.3","0.03","4263.7","4350.13","9.6","0.95180","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","244.7","236.6","-0.05","2691.4","2602.56","-8.1","0.93080","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.3","0.4","0.15","52.6","77.98","0.1","0.46240","1.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","291.7","290.7","-0.00","8749.6","8720.46","-1.0","0.99120","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","249.3","246.8","-0.01","7230.5","7156.11","-2.6","0.96050","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","0.0","0.1","0.19","0.0","5.17","0.1","1.00000","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","298.2","300.6","0.01","6262.7","6312.86","2.4","0.98730","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","45.3","44.6","-0.02","861.5","847.48","-0.7","0.96320","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","203.0","200.8","-0.02","5682.9","5621.35","-2.2","0.96990","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","267.5","251.5","-0.09","18727.8","17602.53","-16.1","0.81760","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","296.9","278.4","-0.09","20186.3","18930.12","-18.5","0.71370","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","291.4","319.2","0.13","5827.3","6383.32","27.8","0.73250","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","166.8","171.7","0.04","15677.3","16143.40","5.0","0.88600","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","194.5","191.6","-0.02","19446.1","19164.54","-2.8","0.93830","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","237.9","235.8","-0.01","19266.8","19097.36","-2.1","0.96440","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","207.3","218.9","0.08","16793.8","17727.96","11.5","0.73510","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","491.8","454.4","-0.11","26063.0","24084.51","-37.3","0.74520","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","398.2","418.5","0.07","16327.3","17158.12","20.3","0.83980","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","161.2","160.6","-0.01","2740.3","2730.34","-0.6","0.98840","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","319.9","309.6","-0.05","12796.9","12385.19","-10.3","0.87510","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","330.1","336.5","0.03","11884.4","12114.13","6.4","0.92840","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2465.3","2468.9","0.00","56701.0","56784.25","3.6","0.99780","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","146.5","143.1","-0.03","5714.6","5580.48","-3.4","0.91470","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","316.5","314.7","-0.01","12343.3","12274.32","-1.8","0.98020","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","299.7","302.3","0.01","20681.7","20858.08","2.6","0.96600","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","102.8","114.1","0.15","1645.2","1825.08","11.2","0.76690","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.7","1.1","0.29","21.5","32.88","0.4","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.6","0.5","-0.05","16.1","14.56","-0.1","1.00000","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","257.1","246.1","-0.06","5913.7","5659.87","-11.0","0.91720","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","405.8","415.7","0.03","4463.9","4572.34","9.9","0.92110","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","1046.1","945.0","-0.15","16736.9","15120.70","-101.0","0.83800","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","441.3","436.1","-0.02","85620.7","84612.87","-5.2","0.94220","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","116.3","113.5","-0.04","2326.4","2269.02","-2.9","0.91770","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","404.0","400.4","-0.01","27474.7","27227.78","-3.6","0.94990","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","20.3","20.6","0.02","223.3","226.90","0.3","0.97330","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","26.2","31.2","0.24","786.9","935.80","5.0","0.58890","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","166.2","178.4","0.10","4320.6","4638.10","12.2","0.79280","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","5.5","3.9","-0.40","430.5","307.70","-1.6","0.14980","1.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","7.8","7.8","-0.00","669.9","669.90","-0.0","1.00000","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","282.4","279.0","-0.02","23436.5","23154.82","-3.4","0.94010","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","42.1","56.0","0.40","1178.2","1568.58","13.9","0.10330","1.00000"]
["ID=gene-segA","SegA homing endonuclease","62","197.3","207.5","0.07","12229.5","12863.89","10.2","0.82870","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","168.3","165.7","-0.02","10938.6","10769.63","-2.6","0.92330","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","170.7","171.3","0.01","11095.9","11136.05","0.6","0.98270","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","239.8","257.8","0.10","14387.9","15468.33","18.0","0.66070","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","461.5","466.5","0.02","7384.0","7464.28","5.0","0.97930","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","234.6","223.8","-0.07","4926.1","4700.11","-10.8","0.85730","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","149.9","157.8","0.07","9292.3","9783.10","7.9","0.79840","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","476.6","524.6","0.14","4289.4","4721.25","48.0","0.77800","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","268.9","266.8","-0.01","1613.6","1601.00","-2.1","0.96450","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","45.0","47.0","0.06","1708.6","1787.50","2.1","0.85490","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","86.5","102.4","0.24","3891.7","4607.57","15.9","0.42350","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","156.6","161.9","0.05","3288.3","3400.24","5.3","0.89090","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","212.2","220.1","0.05","3395.7","3521.92","7.9","0.90670","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","828.4","708.5","-0.23","19054.2","16294.67","-120.0","0.79250","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","311.8","296.2","-0.07","14340.7","13624.46","-15.6","0.86550","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","131.8","120.5","-0.13","3162.7","2891.94","-11.3","0.80700","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","180.0","188.3","0.06","7199.9","7533.34","8.3","0.83490","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","183.9","195.4","0.09","2943.2","3126.83","11.5","0.85420","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","127","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","5.3","4.0","-0.32","524.4","399.31","-1.3","0.71470","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.3","0.3","-0.02","11.8","11.27","-0.0","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","165.0","159.9","-0.05","3300.1","3197.77","-5.1","0.92090","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","13.8","18.8","0.41","138.5","187.91","4.9","0.79860","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","22.9","29.8","0.37","733.2","954.12","6.9","0.47870","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","20.9","23.0","0.14","1065.5","1175.38","2.2","0.65990","1.00000"]
["ID=gene-vs.3","hypothetical protein","20","618.4","616.9","-0.00","12367.5","12338.21","-1.5","0.99490","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","257.5","256.7","-0.00","5664.1","5647.65","-0.7","0.99190","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","228.7","226.3","-0.02","3888.5","3846.53","-2.5","0.97210","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","181.0","182.7","0.01","4162.2","4201.68","1.7","0.97480","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","120.5","128.8","0.09","3132.7","3347.63","8.3","0.84760","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","403.4","389.9","-0.05","23799.9","23004.49","-13.5","0.86570","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.3","0.3","-0.03","15.6","14.09","-0.0","0.74980","1.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","301.4","274.7","-0.13","28034.1","25546.92","-26.7","0.55010","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","37.3","38.6","0.05","1156.2","1197.46","1.3","0.91790","1.00000"]
["ID=rnaC","rnaC","11","91.3","100.7","0.14","1004.3","1107.73","9.4","0.83900","1.00000"]
["ID=rnaD","rnaD","7","56.7","63.0","0.15","397.2","441.12","6.3","0.70740","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","56.0","58.4","0.06","280.2","292.20","2.4","0.79440","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","141.2","165.7","0.23","564.7","662.85","24.5","0.69670","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","314.7","342.7","0.12","1258.8","1370.81","28.0","0.68750","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","60.8","62.0","0.03","182.5","186.03","1.2","1.00000","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","180.5","200.1","0.15","541.6","600.37","19.6","0.67220","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","163.4","174.6","0.10","980.2","1047.60","11.2","0.82420","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","52.1","57.1","0.13","104.1","114.16","5.0","0.67180","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","78.7","81.7","0.05","393.5","408.71","3.0","0.93730","1.00000"]

{"sheet":"Data S27","index":27,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_Control_vs_DarTG2"]
[]
["#Resampling"]
["#Console: python3 ../transit/src/transit.py resampling M9_EV_R1_L2_R1_fastp_subsampled5M_edited10min.wig darTG2_R1_L2_R1_fastp_subsampled5M_edited10min.wig ../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/darTG2-M9_EV"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'M9_EV_R1_L2_R1_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'darTG2_R1_L2_R1_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 1"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","3.6","3.6","-0.01","246.7","245.34","-0.0","0.99670","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","262.1","264.4","0.01","6028.4","6081.09","2.3","0.97770","1.00000"]
["ID=gene-24.3","hypothetical protein","14","275.2","270.0","-0.03","3852.2","3780.06","-5.2","0.95210","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","4.0","4.3","0.09","456.3","492.08","0.3","0.90800","1.00000"]
["ID=gene-30.1","hypothetical protein","21","268.5","272.5","0.02","5638.4","5722.37","4.0","0.95510","1.00000"]
["ID=gene-30.2","hypothetical protein","71","255.6","255.8","0.00","18146.1","18163.83","0.3","0.99450","1.00000"]
["ID=gene-30.3","hypothetical protein","28","256.8","262.9","0.03","7189.9","7360.32","6.1","0.92030","1.00000"]
["ID=gene-30.4","hypothetical protein","21","350.7","342.7","-0.03","7365.0","7196.29","-8.0","0.92830","1.00000"]
["ID=gene-30.5","hypothetical protein","20","396.2","419.8","0.08","7923.4","8396.99","23.7","0.86130","1.00000"]
["ID=gene-30.6","hypothetical protein","21","184.2","186.1","0.01","3868.8","3907.85","1.9","0.97460","1.00000"]
["ID=gene-30.7","hypothetical protein","28","289.8","293.2","0.02","8114.1","8208.34","3.4","0.97410","1.00000"]
["ID=gene-30.8","hypothetical protein","24","241.7","244.7","0.02","5801.4","5872.92","3.0","0.95150","1.00000"]
["ID=gene-30.9","hypothetical protein","5","115.7","113.9","-0.02","578.5","569.68","-1.8","0.95530","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","4.1","4.0","-0.05","78.8","75.28","-0.2","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","122.3","122.2","-0.00","2078.6","2076.60","-0.1","0.99770","1.00000"]
["ID=gene-31.2","hypothetical protein","24","216.7","215.5","-0.01","5200.9","5170.81","-1.3","0.98510","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","11.2","10.5","-0.08","257.0","242.09","-0.6","0.74660","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","5.8","5.8","0.00","658.7","660.29","0.0","0.99080","1.00000"]
["ID=gene-39.1","hypothetical protein","25","278.7","266.3","-0.07","6967.4","6657.75","-12.4","0.82480","1.00000"]
["ID=gene-39.2","hypothetical protein","11","99.0","87.9","-0.17","1089.4","967.44","-11.1","0.68050","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","9.1","9.7","0.08","245.8","261.61","0.6","0.87170","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.7","3.4","-0.08","211.3","196.09","-0.3","0.86500","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.1","4.4","0.07","90.5","95.72","0.2","0.92460","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","-0.01","6.7","6.04","-0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","235.3","240.8","0.03","4235.5","4333.95","5.5","0.93650","1.00000"]
["ID=gene-46.2","hypothetical protein","24","222.9","243.7","0.13","5350.0","5848.76","20.8","0.82480","1.00000"]
["ID=gene-47.1","hypothetical protein","12","132.8","145.0","0.13","1594.1","1739.71","12.1","0.84080","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","13.6","14.3","0.07","447.3","472.57","0.8","0.96920","1.00000"]
["ID=gene-49.1","hypothetical protein","13","256.2","242.9","-0.08","3331.0","3157.41","-13.4","0.87380","1.00000"]
["ID=gene-49.2","hypothetical protein","24","238.2","224.9","-0.08","5716.3","5397.10","-13.3","0.81550","1.00000"]
["ID=gene-49.3","hypothetical protein","23","177.7","169.3","-0.07","4087.7","3893.44","-8.4","0.89400","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.2","0.07","4.9","7.43","0.1","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.3","0.2","-0.07","27.3","20.91","-0.1","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","268.8","260.9","-0.04","4032.2","3913.89","-7.9","0.92630","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.1","0.1","-0.02","6.3","5.11","-0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","187.7","191.5","0.03","3378.9","3446.43","3.8","0.93210","1.00000"]
["ID=gene-55.2","hypothetical protein","23","104.4","101.8","-0.04","2402.3","2340.53","-2.7","0.95340","1.00000"]
["ID=gene-55.3","hypothetical protein","9","204.1","219.1","0.10","1836.8","1972.05","15.0","0.82400","1.00000"]
["ID=gene-55.4","hypothetical protein","11","149.3","150.2","0.01","1642.4","1652.36","0.9","0.98340","1.00000"]
["ID=gene-55.5","hypothetical protein","25","207.9","211.0","0.02","5196.4","5275.83","3.2","0.95580","1.00000"]
["ID=gene-55.6","hypothetical protein","20","593.6","584.4","-0.02","11872.7","11688.69","-9.2","0.95990","1.00000"]
["ID=gene-55.8","hypothetical protein","20","374.7","374.1","-0.00","7493.5","7481.14","-0.6","0.99620","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","9.1","8.8","-0.05","73.0","70.16","-0.4","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","129.5","150.5","0.22","4532.8","5267.46","21.0","0.33000","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","11.6","6.5","-0.75","1149.0","644.96","-5.1","0.59350","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","10.0","10.2","0.03","626.9","643.56","0.3","1.00000","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","248.8","235.6","-0.08","7712.0","7303.17","-13.2","0.86830","1.00000"]
["ID=gene-61.1","hypothetical protein","12","120.2","112.5","-0.09","1441.8","1350.32","-7.6","0.81080","1.00000"]
["ID=gene-61.2","hypothetical protein","58","171.4","163.2","-0.07","9942.4","9463.40","-8.3","0.77990","1.00000"]
["ID=gene-61.4","hypothetical protein","21","287.6","282.7","-0.03","6040.5","5935.65","-5.0","0.94810","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","3.3","3.4","0.02","163.4","166.35","0.1","0.98220","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","118.7","138.9","0.23","7713.4","9029.41","20.2","0.41090","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","379.7","386.2","0.02","34933.6","35534.46","6.5","0.92790","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","67.9","83.5","0.29","1290.9","1586.84","15.6","0.37630","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","363.2","346.7","-0.07","22880.8","21843.06","-16.5","0.86130","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","17.7","29.7","0.72","1694.8","2851.66","12.1","0.01140","1.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","328.4","334.1","0.02","5911.1","6013.72","5.7","0.97040","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","59.8","58.5","-0.03","777.8","760.66","-1.3","0.95760","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","47.8","44.6","-0.10","1195.1","1116.13","-3.2","0.84710","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","20.7","21.3","0.03","497.9","510.20","0.5","0.93150","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","406.0","405.3","-0.00","7308.6","7294.80","-0.8","0.99600","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","396.3","398.5","0.01","15850.8","15938.54","2.2","0.98240","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","201.0","215.8","0.10","35783.0","38403.78","14.7","0.57060","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","179.8","176.6","-0.03","3056.1","3002.21","-3.2","0.94660","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","173.1","168.1","-0.04","3289.4","3194.12","-5.0","0.89440","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","168.3","169.4","0.01","3029.2","3050.07","1.2","0.98170","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","193.3","205.2","0.09","3479.7","3694.10","11.9","0.83910","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","337.5","352.1","0.06","9111.8","9507.08","14.6","0.87210","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","542.1","543.3","0.00","6505.7","6519.74","1.2","0.99620","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","291.1","299.2","0.04","6113.5","6283.69","8.1","0.91940","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","491.3","507.9","0.05","16211.7","16761.46","16.7","0.88980","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","272.3","265.2","-0.04","4356.4","4243.80","-7.0","0.91470","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","53.0","61.7","0.22","1165.6","1357.76","8.7","0.80350","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","256.6","290.1","0.18","2822.8","3190.87","33.5","0.77280","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","362.6","370.0","0.03","35532.2","36258.88","7.4","0.87240","1.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","10.7","11.7","0.12","417.8","456.77","1.0","0.82700","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","148.9","150.9","0.02","4766.1","4827.89","1.9","0.94950","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","140.6","147.8","0.07","2672.3","2807.52","7.1","0.80740","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","344.4","341.1","-0.01","6543.3","6481.17","-3.3","0.97890","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","278.3","279.1","0.00","4453.1","4465.91","0.8","0.99340","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","460.5","475.8","0.05","9671.5","9992.66","15.3","0.93240","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","134.3","140.2","0.06","2283.2","2383.28","5.9","0.90730","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","189.1","192.5","0.03","15315.2","15589.57","3.4","0.90210","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","115.4","119.9","0.05","14429.5","14991.08","4.5","0.75800","1.00000"]
["ID=gene-dda.1","hypothetical protein","33","141.0","148.9","0.08","4651.9","4912.46","7.9","0.81470","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","44.7","54.4","0.28","2011.9","2448.79","9.7","0.30090","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","223.6","224.7","0.01","7826.6","7864.49","1.1","0.98540","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","165.2","162.7","-0.02","2147.5","2115.63","-2.5","0.96340","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","456.6","446.2","-0.03","17805.7","17400.38","-10.4","0.93480","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","133.7","139.5","0.06","5346.4","5578.79","5.8","0.83410","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","283.1","285.2","0.01","6512.4","6558.77","2.0","0.98290","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","317.3","316.3","-0.00","7614.9","7592.19","-0.9","0.99240","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","21.1","18.6","-0.17","442.4","390.32","-2.5","0.73760","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","3.9","4.0","0.04","170.2","176.11","0.1","1.00000","1.00000"]
["ID=gene-e.2","hypothetical protein","26","141.9","143.6","0.02","3690.1","3733.13","1.7","0.96520","1.00000"]
["ID=gene-e.3","hypothetical protein","37","222.3","229.5","0.05","8226.1","8491.79","7.2","0.91120","1.00000"]
["ID=gene-e.4","hypothetical protein","42","169.6","167.8","-0.01","7121.9","7048.07","-1.8","0.96700","1.00000"]
["ID=gene-e.5","hypothetical protein","52","326.2","344.2","0.08","16961.2","17897.11","18.0","0.84070","1.00000"]
["ID=gene-e.6","hypothetical protein","42","408.8","391.8","-0.06","17167.7","16454.78","-17.0","0.85210","1.00000"]
["ID=gene-e.7","hypothetical protein","29","293.7","298.1","0.02","8516.7","8643.73","4.4","0.96370","1.00000"]
["ID=gene-e.8","hypothetical protein","22","294.1","312.8","0.09","6471.2","6880.79","18.6","0.84930","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","133.2","139.0","0.06","7327.4","7646.09","5.8","0.85770","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","162.0","176.5","0.12","1944.2","2118.42","14.5","0.81290","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","453.2","442.2","-0.04","10877.8","10612.53","-11.1","0.92900","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","243.4","247.8","0.03","4137.0","4212.67","4.5","0.95230","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","118.6","113.6","-0.06","4150.0","3976.15","-5.0","0.82940","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","8.1","8.9","0.11","611.2","667.26","0.7","0.83710","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.2","0.1","-0.24","24.2","5.11","-0.2","0.24660","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","516.0","503.6","-0.03","10319.4","10072.58","-12.3","0.94300","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","251.8","241.4","-0.06","7806.1","7483.46","-10.4","0.85210","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","466.6","473.8","0.02","10731.4","10896.90","7.2","0.94940","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","167.3","160.4","-0.06","3680.7","3528.22","-6.9","0.89820","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","415.4","394.9","-0.07","18694.6","17768.39","-20.6","0.90530","1.00000"]
["ID=gene-mobA","homing endonuclease","5","62.8","64.3","0.03","313.9","321.55","1.5","0.94870","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","321.7","328.1","0.03","27991.3","28548.20","6.4","0.94360","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","434.1","424.7","-0.03","27779.5","27182.08","-9.3","0.89870","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","211.0","214.0","0.02","17089.8","17336.25","3.0","0.91420","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","261.5","277.3","0.08","15430.8","16361.85","15.8","0.72930","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","623.9","641.2","0.04","8734.3","8976.90","17.3","0.91680","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","288.6","293.2","0.02","2020.4","2052.43","4.6","0.98320","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","428.9","439.6","0.04","8149.9","8352.39","10.7","0.95430","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","144.2","141.7","-0.03","2739.0","2691.35","-2.5","0.95330","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","398.7","386.1","-0.05","4784.5","4633.66","-12.6","0.92850","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","164.4","168.9","0.04","5425.7","5575.07","4.5","0.90420","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","101.3","108.9","0.10","6280.0","6752.07","7.6","0.70960","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","225.1","201.3","-0.16","4051.5","3623.01","-23.8","0.75420","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","145.7","129.6","-0.17","6849.2","6090.85","-16.1","0.69580","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","160.9","166.7","0.05","1609.3","1666.76","5.7","0.91860","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","132.1","162.6","0.30","7659.2","9429.95","30.5","0.31780","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","6.9","6.2","-0.13","364.0","327.59","-0.7","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","421.8","418.2","-0.01","4218.0","4181.54","-3.6","0.98520","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","233.2","225.0","-0.05","9563.1","9225.03","-8.2","0.87160","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","255.3","234.6","-0.12","7914.4","7273.89","-20.7","0.74420","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","249.8","246.8","-0.02","13737.7","13575.71","-2.9","0.94760","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","391.2","395.2","0.01","21904.7","22129.29","4.0","0.97420","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","524.8","515.3","-0.03","16267.6","15972.92","-9.5","0.92710","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","81.2","81.2","-0.00","1218.4","1218.36","-0.0","1.00000","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","224.3","211.5","-0.08","8973.8","8459.72","-12.9","0.74690","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","245.9","238.8","-0.04","4917.0","4776.77","-7.0","0.92150","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","126.2","125.0","-0.01","1009.7","999.96","-1.2","0.98190","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","244.4","224.6","-0.12","1955.4","1796.40","-19.9","0.78380","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","91.7","81.8","-0.16","641.7","572.93","-9.8","0.82580","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","372.3","366.3","-0.02","6701.4","6594.09","-6.0","0.96440","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","451.9","444.2","-0.02","4067.1","3997.99","-7.7","0.95640","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","258.1","278.6","0.11","2839.3","3064.48","20.5","0.85630","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","1.2","1.0","-0.11","207.3","179.36","-0.2","0.60540","1.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","302.0","326.2","0.11","9059.4","9785.42","24.2","0.81320","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","221.9","232.9","0.07","6435.4","6753.93","11.0","0.81480","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","1.3","1.4","0.03","47.9","49.72","0.1","0.94750","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","327.3","351.0","0.10","6872.9","7371.01","23.7","0.87720","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","39.8","38.4","-0.05","756.7","729.99","-1.4","0.92100","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","189.5","196.3","0.05","5305.2","5495.15","6.8","0.89600","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","241.9","227.9","-0.09","16935.7","15956.19","-14.0","0.82320","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","248.7","237.0","-0.07","16914.2","16116.97","-11.7","0.77590","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","307.4","289.6","-0.09","6147.0","5791.14","-17.8","0.81350","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","168.6","171.8","0.03","15844.0","16152.75","3.3","0.91880","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","186.6","186.9","0.00","18663.2","18694.94","0.3","0.99200","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","230.7","229.7","-0.01","18685.2","18603.40","-1.0","0.98170","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","218.1","217.2","-0.01","17663.4","17596.00","-0.8","0.98080","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","409.3","416.2","0.02","21691.5","22059.59","6.9","0.94150","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","412.4","410.7","-0.01","16910.2","16836.74","-1.8","0.98540","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","150.4","146.3","-0.04","2556.3","2487.83","-4.0","0.89640","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","307.0","295.5","-0.05","12278.9","11820.66","-11.5","0.85580","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","311.0","313.0","0.01","11194.4","11266.31","2.0","0.97780","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2637.3","2603.2","-0.02","60657.3","59872.78","-34.1","0.98060","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","136.4","140.7","0.05","5317.8","5487.71","4.4","0.88320","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","246.5","243.5","-0.02","9613.3","9495.00","-3.0","0.96240","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","291.4","287.2","-0.02","20106.9","19816.18","-4.2","0.94430","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","116.5","119.5","0.04","1864.1","1912.10","3.0","0.94820","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.5","0.5","0.02","15.2","15.80","0.0","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","185.4","216.2","0.22","4264.2","4972.86","30.8","0.73950","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","428.6","450.0","0.07","4714.6","4950.10","21.4","0.83530","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","609.3","703.7","0.21","9748.9","11259.34","94.4","0.77010","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","380.0","369.3","-0.04","73713.5","71646.97","-10.7","0.84010","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","80.7","62.0","-0.37","1614.2","1240.20","-18.7","0.30090","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","383.6","376.4","-0.03","26084.7","25595.71","-7.2","0.89980","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","11.1","12.2","0.12","122.2","133.82","1.1","0.85460","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","29.3","34.2","0.22","877.6","1025.98","4.9","0.65030","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","267.3","161.7","-0.72","6950.4","4203.38","-105.7","0.13990","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","13.4","12.4","-0.11","1048.7","964.65","-1.1","0.59760","1.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","14.8","15.0","0.02","1271.2","1291.31","0.2","0.97260","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","284.8","285.7","0.00","23642.0","23715.66","0.9","0.98550","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","59.1","54.3","-0.12","1653.6","1519.93","-4.8","0.61900","1.00000"]
["ID=gene-segA","SegA homing endonuclease","62","216.2","213.6","-0.02","13403.7","13242.07","-2.6","0.95630","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","194.0","198.2","0.03","12609.8","12880.56","4.2","0.90740","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","177.6","180.7","0.02","11545.4","11747.71","3.1","0.91890","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","250.1","243.0","-0.04","15006.7","14578.92","-7.1","0.86160","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","428.5","430.0","0.00","6856.3","6879.39","1.4","0.99310","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","227.5","230.4","0.02","4778.2","4837.65","2.8","0.96300","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","191.0","188.8","-0.02","11844.5","11702.63","-2.3","0.94870","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","463.7","463.1","-0.00","4173.3","4168.06","-0.6","0.99610","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","255.9","239.0","-0.10","1535.4","1433.96","-16.9","0.85930","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","108.9","118.5","0.12","4137.0","4501.23","9.6","0.72900","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","116.0","126.0","0.12","5221.5","5672.19","10.0","0.70140","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","181.2","178.3","-0.02","3805.6","3744.29","-2.9","0.94220","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","232.4","245.6","0.08","3718.3","3929.22","13.2","0.85460","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","729.4","715.8","-0.03","16775.4","16463.61","-13.6","0.94010","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","288.0","45.3","-2.64","13250.1","2085.42","-242.7","0.00000","0.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","130.9","135.3","0.05","3141.6","3246.63","4.4","0.92630","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","195.3","200.2","0.04","7810.5","8006.67","4.9","0.90450","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","222.6","231.6","0.06","3561.6","3705.25","9.0","0.90640","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","127","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.8","5.3","-0.32","671.7","520.43","-1.5","0.73470","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.3","0.2","-0.16","12.5","6.97","-0.1","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","176.6","182.4","0.05","3532.9","3647.17","5.7","0.92120","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","14.0","15.5","0.14","139.7","155.20","1.5","0.85750","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","9.9","2.3","-1.73","317.0","73.42","-7.6","0.40840","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","9.4","6.8","-0.41","476.9","345.71","-2.6","0.20750","1.00000"]
["ID=gene-vs.3","hypothetical protein","20","610.8","652.2","0.09","12216.6","13043.66","41.4","0.86780","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","264.5","255.4","-0.05","5818.4","5618.75","-9.1","0.89600","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","229.6","232.4","0.02","3902.4","3951.06","2.9","0.97290","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","191.8","187.3","-0.03","4411.0","4308.39","-4.5","0.93840","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","112.8","115.9","0.04","2933.4","3012.43","3.0","0.94040","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","348.4","369.3","0.08","20558.2","21786.83","20.8","0.76560","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","1.7","1.6","-0.06","87.3","81.32","-0.1","0.86080","1.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","275.9","265.2","-0.06","25658.8","24666.37","-10.7","0.76390","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","85.7","97.7","0.19","2657.1","3028.70","12.0","0.70430","1.00000"]
["ID=rnaC","rnaC","11","107.8","105.4","-0.03","1185.7","1158.88","-2.4","0.96050","1.00000"]
["ID=rnaD","rnaD","7","72.6","67.7","-0.10","508.2","473.96","-4.9","0.80470","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","111.9","120.0","0.10","559.3","599.88","8.1","0.73150","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","288.0","308.5","0.10","1152.1","1234.16","20.5","0.79230","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","459.3","508.0","0.15","1837.2","2031.99","48.7","0.68760","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","89.1","92.9","0.06","267.3","278.80","3.8","0.90100","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","236.1","242.1","0.04","708.4","726.27","6.0","0.70620","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","243.7","239.3","-0.03","1462.0","1435.82","-4.4","0.95720","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","75.9","78.8","0.05","151.8","157.52","2.9","0.67050","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","108.3","116.4","0.10","541.4","581.76","8.1","0.84820","1.00000"]

{"sheet":"Data S28","index":28,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_LB_vs_M9"]
[]
["#Resampling"]
["#Console: python3 ../transit/src/transit.py resampling LB_2_R1_001_fastp_subsampled5M_edited10min.wig M9_1_R1_001_fastp_subsampled5M_edited10min.wig ../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/LB-M9_2"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'LB_2_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'M9_1_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 8"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.9","3.6","0.24","200.2","249.81","0.7","0.82250","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.04","0.0","4.47","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","400.1","358.2","-0.16","9201.7","8239.67","-41.8","0.81260","1.00000"]
["ID=gene-24.3","hypothetical protein","14","227.5","267.7","0.23","3184.8","3747.56","40.2","0.71450","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.9","4.7","0.22","450.7","544.71","0.8","0.81810","1.00000"]
["ID=gene-30.1","hypothetical protein","21","402.6","295.8","-0.44","8455.2","6211.53","-106.8","0.20500","1.00000"]
["ID=gene-30.2","hypothetical protein","71","329.2","306.7","-0.10","23371.2","21774.90","-22.5","0.60880","1.00000"]
["ID=gene-30.3","hypothetical protein","28","270.8","295.1","0.12","7581.6","8264.04","24.4","0.76540","1.00000"]
["ID=gene-30.4","hypothetical protein","21","356.5","345.4","-0.05","7485.9","7253.42","-11.1","0.90080","1.00000"]
["ID=gene-30.5","hypothetical protein","20","707.3","512.8","-0.46","14146.5","10255.21","-194.6","0.61660","1.00000"]
["ID=gene-30.6","hypothetical protein","21","181.0","182.6","0.01","3800.3","3833.67","1.6","0.97720","1.00000"]
["ID=gene-30.7","hypothetical protein","28","296.2","304.3","0.04","8294.4","8519.94","8.1","0.93040","1.00000"]
["ID=gene-30.8","hypothetical protein","24","256.2","240.2","-0.09","6149.2","5765.53","-16.0","0.75680","1.00000"]
["ID=gene-30.9","hypothetical protein","5","128.0","127.9","-0.00","640.0","639.35","-0.1","0.99930","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","2.4","2.1","-0.12","45.0","39.81","-0.3","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","96.3","109.6","0.19","1636.6","1863.22","13.3","0.66610","1.00000"]
["ID=gene-31.2","hypothetical protein","24","202.7","197.2","-0.04","4866.0","4731.77","-5.6","0.93830","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","14.9","15.7","0.07","343.7","361.11","0.8","1.00000","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","4.3","6.5","0.51","480.4","731.56","2.2","0.60160","1.00000"]
["ID=gene-39.1","hypothetical protein","25","239.4","244.4","0.03","5984.4","6109.17","5.0","0.91960","1.00000"]
["ID=gene-39.2","hypothetical protein","11","96.4","88.3","-0.13","1060.9","970.81","-8.2","0.75250","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","10.5","9.8","-0.09","283.0","264.43","-0.7","0.86910","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.1","2.9","-0.06","176.1","166.13","-0.2","0.93910","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.2","0.0","-0.27","11.7","0.00","-0.2","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.0","5.3","0.33","87.6","115.77","1.3","0.64290","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.07","0.0","6.91","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","228.0","232.7","0.03","4104.6","4189.09","4.7","0.95240","1.00000"]
["ID=gene-46.2","hypothetical protein","24","234.6","232.2","-0.01","5629.4","5572.18","-2.4","0.97850","1.00000"]
["ID=gene-47.1","hypothetical protein","12","168.9","146.2","-0.21","2026.6","1753.95","-22.7","0.77720","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","12.7","10.6","-0.24","418.9","348.92","-2.1","0.86650","1.00000"]
["ID=gene-49.1","hypothetical protein","13","267.3","269.8","0.01","3475.0","3507.09","2.5","0.97670","1.00000"]
["ID=gene-49.2","hypothetical protein","24","239.3","285.0","0.25","5742.4","6839.51","45.7","0.54530","1.00000"]
["ID=gene-49.3","hypothetical protein","23","168.7","181.1","0.10","3880.3","4166.34","12.4","0.83910","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.0","-0.19","6.4","0.00","-0.1","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.3","0.0","-0.32","6.0","0.00","-0.3","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.2","0.2","0.05","19.7","23.56","0.0","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","261.2","266.6","0.03","3918.4","3998.99","5.4","0.95370","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.1","0.0","-0.12","4.8","0.00","-0.1","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","229.6","177.3","-0.37","4133.1","3192.29","-52.3","0.26360","1.00000"]
["ID=gene-55.2","hypothetical protein","23","109.7","98.3","-0.16","2523.9","2260.48","-11.5","0.81150","1.00000"]
["ID=gene-55.3","hypothetical protein","9","212.4","217.0","0.03","1911.2","1953.39","4.7","0.95280","1.00000"]
["ID=gene-55.4","hypothetical protein","11","163.3","153.7","-0.09","1796.2","1690.18","-9.6","0.83070","1.00000"]
["ID=gene-55.5","hypothetical protein","25","222.1","333.5","0.58","5551.4","8336.34","111.4","0.58820","1.00000"]
["ID=gene-55.6","hypothetical protein","20","574.3","584.5","0.03","11485.2","11689.48","10.2","0.95930","1.00000"]
["ID=gene-55.8","hypothetical protein","20","385.3","374.9","-0.04","7705.0","7498.77","-10.3","0.92890","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","11.1","4.9","-1.03","88.8","39.40","-6.2","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","156.5","142.0","-0.14","5478.7","4969.80","-14.5","0.53950","1.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","11.5","12.6","0.13","1135.7","1247.83","1.1","0.91250","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","11.3","10.5","-0.10","713.6","659.25","-0.9","0.87200","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.1","0.17","0.0","4.87","0.1","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","243.1","270.4","0.15","7536.6","8383.05","27.3","0.74880","1.00000"]
["ID=gene-61.1","hypothetical protein","12","116.5","121.1","0.06","1397.8","1453.77","4.7","0.89550","1.00000"]
["ID=gene-61.2","hypothetical protein","58","159.5","162.6","0.03","9252.0","9429.41","3.1","0.91000","1.00000"]
["ID=gene-61.4","hypothetical protein","21","296.0","283.9","-0.06","6216.8","5962.54","-12.1","0.87770","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","3.2","4.2","0.29","158.0","203.50","0.9","0.72330","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","62.4","120.4","0.94","4058.7","7827.38","58.0","0.00170","0.05327"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","370.7","350.4","-0.08","34109.0","32236.86","-20.3","0.77000","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","52.4","93.4","0.82","995.8","1775.48","41.0","0.03240","0.60912"]
["ID=gene-SegG","SegG homing endonuclease","63","351.7","357.1","0.02","22158.7","22499.14","5.4","0.95240","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","187.1","90.2","-1.04","17960.4","8663.73","-96.8","0.00000","0.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","200.4","266.1","0.41","3607.3","4789.45","65.7","0.61320","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","29.3","40.1","0.44","381.1","520.74","10.7","0.59110","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","33.4","23.1","-0.51","835.4","577.61","-10.3","0.32550","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","17.7","11.2","-0.61","424.9","269.71","-6.5","0.18520","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","387.0","414.9","0.10","6965.7","7468.71","27.9","0.86520","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","605.0","369.9","-0.71","24198.5","14796.06","-235.1","0.06340","0.92355"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","225.7","187.3","-0.27","40183.4","33336.42","-38.5","0.11660","1.00000"]
["ID=gene-alt.-1","hypothetical protein","17","164.7","167.7","0.03","2799.2","2850.68","3.0","0.94290","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","160.7","160.5","-0.00","3054.1","3049.71","-0.2","0.99460","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","222.8","143.1","-0.63","4010.9","2576.49","-79.7","0.20290","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","209.2","212.4","0.02","3765.7","3822.70","3.2","0.95730","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","235.8","376.3","0.67","6365.9","10160.16","140.5","0.10710","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","453.3","671.0","0.56","5439.7","8052.41","217.7","0.33830","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","247.3","301.6","0.29","5192.4","6334.61","54.4","0.49230","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","426.8","492.3","0.21","14083.0","16244.55","65.5","0.54960","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","231.9","276.8","0.25","3709.8","4429.15","45.0","0.45110","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","24.2","25.0","0.05","531.9","549.58","0.8","0.95710","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","142.1","289.0","1.02","1563.0","3178.48","146.9","0.13840","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","380.2","244.0","-0.64","37254.8","23914.73","-136.1","0.00060","0.02115"]
["ID=gene-cd","Cd dCMP deaminase","39","43.0","17.5","-1.25","1675.6","683.63","-25.4","0.56450","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","164.1","168.5","0.04","5250.3","5393.05","4.5","0.89110","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","134.9","137.8","0.03","2562.8","2619.15","3.0","0.92230","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","309.7","299.0","-0.05","5885.1","5681.04","-10.7","0.90470","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","286.2","264.4","-0.11","4579.4","4230.11","-21.8","0.83860","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","469.3","473.2","0.01","9854.6","9937.15","3.9","0.98290","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","111.8","124.7","0.16","1900.3","2119.12","12.9","0.79960","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","179.9","170.0","-0.08","14573.5","13770.01","-9.9","0.70490","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","82.2","271.0","1.71","10277.9","33876.66","188.8","0.00000","0.00000"]
["ID=gene-dda.1","hypothetical protein","33","147.3","156.0","0.08","4862.4","5147.71","8.6","0.80240","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","77.0","49.0","-0.64","3467.0","2203.20","-28.1","0.01700","0.36877"]
["ID=gene-denB","DenB DNA endonuclease IV","35","223.6","225.3","0.01","7825.2","7885.46","1.7","0.97660","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","168.9","168.7","-0.00","2196.2","2193.45","-0.2","0.99660","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","460.2","422.8","-0.12","17948.4","16489.89","-37.4","0.76090","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","168.1","168.7","0.01","6725.7","6749.74","0.6","0.98500","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","334.8","285.4","-0.23","7700.6","6563.30","-49.4","0.57170","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","311.2","316.4","0.02","7469.0","7594.63","5.2","0.96120","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","45.6","74.9","0.70","957.2","1572.79","29.3","0.20100","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","2.5","3.9","0.49","108.1","170.20","1.4","0.74130","1.00000"]
["ID=gene-e.2","hypothetical protein","26","148.5","147.7","-0.01","3859.7","3839.36","-0.8","0.98200","1.00000"]
["ID=gene-e.3","hypothetical protein","37","229.7","233.8","0.03","8498.2","8650.74","4.1","0.95250","1.00000"]
["ID=gene-e.4","hypothetical protein","42","167.9","169.7","0.01","7053.8","7125.88","1.7","0.96700","1.00000"]
["ID=gene-e.5","hypothetical protein","52","343.2","332.9","-0.04","17848.3","17308.38","-10.4","0.90830","1.00000"]
["ID=gene-e.6","hypothetical protein","42","409.8","411.8","0.01","17212.3","17295.38","2.0","0.98450","1.00000"]
["ID=gene-e.7","hypothetical protein","29","286.0","286.5","0.00","8293.2","8309.13","0.6","0.99520","1.00000"]
["ID=gene-e.8","hypothetical protein","22","312.0","307.5","-0.02","6864.8","6764.77","-4.5","0.96390","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","162.0","122.4","-0.40","8909.1","6731.06","-39.6","0.21980","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","154.0","163.9","0.09","1848.1","1966.39","9.9","0.86190","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","444.1","432.8","-0.04","10658.6","10388.03","-11.3","0.92170","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","1076.9","460.5","-1.22","18307.0","7828.60","-616.4","0.75050","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","110.3","103.2","-0.09","3861.0","3613.51","-7.1","0.74630","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","11.0","8.9","-0.28","828.6","668.19","-2.1","0.83610","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.4","0.5","0.11","37.4","48.34","0.1","0.72260","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","444.7","463.6","0.06","8893.8","9272.62","18.9","0.89690","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","199.3","226.8","0.19","6178.2","7029.61","27.5","0.56480","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","422.4","530.3","0.33","9715.9","12196.41","107.8","0.55070","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","159.4","154.7","-0.04","3506.8","3404.32","-4.7","0.93040","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","355.7","366.1","0.04","16004.6","16475.27","10.5","0.95160","1.00000"]
["ID=gene-mobA","homing endonuclease","5","51.0","52.7","0.05","254.9","263.62","1.7","0.92010","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","327.9","312.3","-0.07","28523.8","27172.42","-15.5","0.84400","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","449.9","435.0","-0.05","28792.3","27837.76","-14.9","0.85110","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","228.6","191.6","-0.25","18515.6","15518.68","-37.0","0.17260","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","270.9","243.2","-0.15","15980.5","14350.46","-27.6","0.52110","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","690.3","656.4","-0.07","9663.6","9189.76","-33.8","0.83980","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","269.8","251.5","-0.10","1888.3","1760.45","-18.3","0.88430","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","443.9","416.1","-0.09","8434.3","7905.77","-27.8","0.86650","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","107.4","119.6","0.15","2040.2","2271.85","12.2","0.72070","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","416.4","398.5","-0.06","4996.6","4782.13","-17.9","0.90780","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","163.8","154.6","-0.08","5405.9","5100.18","-9.3","0.77910","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","69.2","104.4","0.59","4291.9","6469.87","35.1","0.04120","0.72615"]
["ID=gene-modA.2","hypothetical protein","18","171.6","229.8","0.42","3089.5","4136.69","58.2","0.44490","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","134.2","162.3","0.27","6306.0","7627.94","28.1","0.55670","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","166.4","171.9","0.05","1663.5","1719.02","5.5","0.91660","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","110.1","142.5","0.37","6384.8","8267.29","32.5","0.22030","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","3.6","8.6","1.05","192.6","456.16","5.0","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","363.0","393.3","0.12","3630.2","3933.19","30.3","0.84000","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","237.8","245.6","0.05","9751.3","10070.79","7.8","0.87970","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","263.8","240.4","-0.13","8177.4","7451.24","-23.4","0.72370","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","244.7","226.5","-0.11","13461.1","12455.97","-18.3","0.66250","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","398.8","386.0","-0.05","22330.3","21615.67","-12.8","0.90880","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","514.0","520.1","0.02","15935.1","16123.91","6.1","0.95750","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","121.2","80.5","-0.58","1817.5","1207.62","-40.7","0.42190","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","221.7","190.8","-0.22","8866.8","7633.62","-30.8","0.41580","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","253.5","264.2","0.06","5070.6","5283.78","10.7","0.88980","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","131.8","130.3","-0.02","1054.5","1042.70","-1.5","0.98180","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","224.0","248.3","0.15","1791.8","1986.70","24.4","0.79390","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","84.7","76.2","-0.15","592.6","533.33","-8.5","0.85380","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","376.4","403.6","0.10","6774.4","7265.20","27.3","0.83400","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","461.1","444.3","-0.05","4150.0","3998.58","-16.8","0.91220","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","169.8","223.1","0.39","1868.2","2454.64","53.3","0.50620","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.9","4.3","1.51","154.0","770.96","3.4","0.00000","0.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","264.5","258.4","-0.03","7935.4","7751.83","-6.1","0.94950","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","212.7","205.7","-0.05","6166.9","5966.60","-6.9","0.87420","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","0.4","3.4","1.67","13.7","121.86","3.0","0.00020","0.00940"]
["ID=gene-nrdB.1","hypothetical protein","21","267.3","301.6","0.17","5612.5","6332.58","34.3","0.79890","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","25.1","54.2","1.08","476.0","1029.30","29.1","0.05090","0.79743"]
["ID=gene-nrdC.1","hypothetical protein","28","195.5","191.8","-0.03","5474.6","5369.49","-3.8","0.94780","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","247.2","267.6","0.11","17305.6","18732.50","20.4","0.75780","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","281.6","233.2","-0.27","19147.2","15858.26","-48.4","0.27500","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","277.0","280.8","0.02","5541.0","5616.86","3.8","0.95740","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","159.6","156.3","-0.03","15004.0","14692.48","-3.3","0.91310","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","183.4","199.4","0.12","18335.9","19936.86","16.0","0.64390","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","240.7","256.9","0.09","19492.9","20807.75","16.2","0.74710","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","211.4","223.1","0.08","17126.3","18074.87","11.7","0.74170","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","451.1","427.0","-0.08","23909.5","22633.19","-24.1","0.81870","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","392.0","429.4","0.13","16071.8","17604.90","37.4","0.71190","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","150.1","155.8","0.05","2552.0","2648.39","5.7","0.87600","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","330.8","293.1","-0.17","13233.1","11722.38","-37.8","0.53510","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","330.4","308.7","-0.10","11896.0","11114.71","-21.7","0.76590","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2134.1","2295.7","0.11","49084.1","52800.48","161.6","0.89130","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","136.0","139.8","0.04","5305.8","5452.76","3.8","0.89880","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","312.6","261.9","-0.25","12193.1","10213.37","-50.8","0.49980","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","321.9","284.5","-0.18","22210.1","19630.59","-37.4","0.53830","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","118.9","110.5","-0.10","1901.9","1768.17","-8.4","0.83540","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.8","1.3","0.35","24.1","38.99","0.5","0.75660","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.0","1.0","0.97","0.0","26.81","1.0","0.06550","0.92355"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","135.5","128.9","-0.07","3117.2","2964.41","-6.6","0.92900","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","294.4","299.0","0.02","3238.6","3288.96","4.6","0.94440","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","761.2","657.5","-0.21","12178.7","10519.64","-103.7","0.77110","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","420.1","363.2","-0.21","81498.9","70467.12","-56.9","0.53370","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","118.7","85.2","-0.47","2373.1","1703.58","-33.5","0.20060","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","388.6","397.8","0.03","26422.1","27047.31","9.2","0.87150","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","12.9","10.3","-0.30","142.3","113.73","-2.6","0.63520","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","40.8","14.8","-1.40","1222.9","444.78","-25.9","0.00730","0.18715"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","178.6","403.0","1.17","4644.1","10479.02","224.4","0.04880","0.79743"]
["ID=gene-rnh","RNaseH ribonuclease","78","12.0","19.0","0.62","937.5","1482.21","7.0","0.01630","0.36877"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","8.8","11.7","0.38","754.6","1005.33","2.9","0.58710","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","278.0","289.2","0.06","23073.3","24005.31","11.2","0.79890","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","51.5","71.0","0.45","1442.8","1986.70","19.4","0.07570","1.00000"]
["ID=gene-segA","SegA homing endonuclease","62","202.5","207.6","0.04","12554.9","12873.13","5.1","0.91320","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","162.6","181.7","0.16","10569.8","11808.90","19.1","0.55060","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","171.8","183.1","0.09","11165.6","11903.95","11.4","0.71960","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.1","0.10","0.0","4.47","0.1","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","238.8","242.8","0.02","14330.2","14570.22","4.0","0.91880","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","443.6","410.9","-0.11","7098.0","6575.08","-32.7","0.84640","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","183.8","210.7","0.20","3860.6","4425.49","26.9","0.62350","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","158.4","215.4","0.44","9819.2","13357.72","57.1","0.11170","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","446.1","460.6","0.05","4014.9","4145.22","14.5","0.92220","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","246.6","216.6","-0.19","1479.8","1299.82","-30.0","0.79660","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","38.9","107.5","1.44","1478.6","4085.92","68.6","0.00060","0.02115"]
["ID=gene-tk","Tk thymidine kinase","45","127.7","121.8","-0.07","5746.0","5482.01","-5.9","0.83470","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","164.6","200.6","0.28","3456.5","4212.65","36.0","0.43130","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","227.9","249.4","0.13","3645.9","3990.05","21.5","0.77880","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","767.3","753.7","-0.03","17647.3","17335.59","-13.6","0.94320","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","289.6","275.0","-0.07","13322.8","12650.54","-14.6","0.86140","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","129.0","132.3","0.04","3095.1","3175.23","3.3","0.94930","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","178.5","184.5","0.05","7139.8","7378.53","6.0","0.87390","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","204.1","208.6","0.03","3265.6","3338.11","4.5","0.94740","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","127","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.8","9.5","0.43","670.2","938.72","2.7","0.68600","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.5","0.3","-0.12","18.1","13.40","-0.1","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","164.8","169.8","0.04","3295.7","3395.38","5.0","0.92040","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","14.0","18.8","0.40","140.3","188.07","4.8","0.70910","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","26.6","5.0","-2.19","849.9","161.26","-21.5","0.00000","0.00000"]
["ID=gene-vs.1","hypothetical protein","51","22.6","11.9","-0.87","1155.0","608.07","-10.7","0.00550","0.15510"]
["ID=gene-vs.3","hypothetical protein","20","652.1","626.2","-0.06","13041.8","12524.21","-25.9","0.91320","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","265.2","262.3","-0.02","5834.0","5770.00","-2.9","0.96610","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","243.4","240.0","-0.02","4138.3","4079.82","-3.4","0.96900","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","185.5","195.5","0.08","4265.8","4497.39","10.1","0.86930","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","129.6","112.8","-0.20","3370.1","2931.51","-16.9","0.69900","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","409.6","386.3","-0.08","24165.5","22789.17","-23.3","0.77300","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.5","6.4","2.26","28.1","331.05","5.8","0.00000","0.00000"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","282.4","255.9","-0.14","26265.7","23801.40","-26.5","0.45200","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","33.6","90.5","1.40","1041.2","2806.81","57.0","0.02170","0.43710"]
["ID=rnaC","rnaC","11","79.9","96.0","0.26","879.2","1056.11","16.1","0.70190","1.00000"]
["ID=rnaD","rnaD","7","61.8","67.3","0.12","432.6","471.19","5.5","0.78270","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","70.4","104.9","0.57","351.8","524.40","34.5","0.17810","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","175.4","230.3","0.39","701.5","921.25","54.9","0.68310","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","307.7","408.8","0.41","1231.0","1635.34","101.1","0.49590","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","63.4","84.1","0.40","190.2","252.25","20.7","0.50160","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","181.3","222.6","0.29","543.9","667.78","41.3","0.69520","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","170.5","206.0","0.27","1022.7","1236.05","35.6","0.59550","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","55.5","75.3","0.43","111.0","150.70","19.9","1.00000","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","81.2","113.0","0.47","406.0","565.02","31.8","0.62260","1.00000"]

{"sheet":"Data S29","index":29,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_K-12_vs_CFE299"]
[]
["#Resampling"]
["#Console: python3 ../../transit/src/transit.py resampling ../../hiden-seq/LB_2_R1_001_fastp_subsampled5M_edited10min.wig T4_299_allmerged_fastp_subsampleds12_edited10min.wig ../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/T4_BW_299"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'../../hiden-seq/LB_2_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'T4_299_allmerged_fastp_subsampleds12_edited10min.wig'"]
["#Annotation path: b'../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 11"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.9","1.1","-0.87","200.2","78.22","-1.8","0.46670","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","400.1","281.0","-0.51","9201.7","6462.22","-119.1","0.60680","1.00000"]
["ID=gene-24.3","hypothetical protein","14","227.5","231.2","0.02","3184.8","3237.24","3.7","0.96370","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.9","4.1","0.04","450.7","468.54","0.2","0.90420","1.00000"]
["ID=gene-30.1","hypothetical protein","21","402.6","377.7","-0.09","8455.2","7931.50","-24.9","0.78700","1.00000"]
["ID=gene-30.2","hypothetical protein","71","329.2","284.6","-0.21","23371.2","20203.35","-44.6","0.31750","1.00000"]
["ID=gene-30.3","hypothetical protein","28","270.8","313.6","0.21","7581.6","8781.55","42.9","0.59140","1.00000"]
["ID=gene-30.4","hypothetical protein","21","356.5","459.0","0.36","7485.9","9639.65","102.6","0.35120","1.00000"]
["ID=gene-30.5","hypothetical protein","20","707.3","488.3","-0.53","14146.5","9765.41","-219.1","0.61880","1.00000"]
["ID=gene-30.6","hypothetical protein","21","181.0","212.5","0.23","3800.3","4461.52","31.5","0.60990","1.00000"]
["ID=gene-30.7","hypothetical protein","28","296.2","358.5","0.27","8294.4","10037.26","62.2","0.56240","1.00000"]
["ID=gene-30.8","hypothetical protein","24","256.2","288.8","0.17","6149.2","6931.53","32.6","0.56910","1.00000"]
["ID=gene-30.9","hypothetical protein","5","128.0","180.5","0.49","640.0","902.58","52.5","0.60030","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","2.4","4.9","0.81","45.0","93.56","2.6","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","96.3","134.5","0.48","1636.6","2286.35","38.2","0.25440","1.00000"]
["ID=gene-31.2","hypothetical protein","24","202.7","253.6","0.32","4866.0","6085.70","50.8","0.55660","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","14.9","8.9","-0.69","343.7","203.60","-6.1","0.74460","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","4.3","3.5","-0.23","480.4","393.01","-0.8","0.84880","1.00000"]
["ID=gene-39.1","hypothetical protein","25","239.4","233.3","-0.04","5984.4","5833.02","-6.1","0.90010","1.00000"]
["ID=gene-39.2","hypothetical protein","11","96.4","69.9","-0.46","1060.9","769.15","-26.5","0.27080","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","10.5","10.2","-0.04","283.0","274.15","-0.3","0.90840","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.1","1.8","-0.56","176.1","101.22","-1.3","0.68460","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.2","0.0","-0.27","11.7","0.00","-0.2","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.0","4.4","0.12","87.6","97.01","0.4","0.86970","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","228.0","244.0","0.10","4104.6","4392.88","16.0","0.83540","1.00000"]
["ID=gene-46.2","hypothetical protein","24","234.6","219.0","-0.10","5629.4","5255.59","-15.6","0.86990","1.00000"]
["ID=gene-47.1","hypothetical protein","12","168.9","150.3","-0.17","2026.6","1803.62","-18.6","0.81790","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","12.7","12.5","-0.02","418.9","412.95","-0.2","1.00000","1.00000"]
["ID=gene-49.1","hypothetical protein","13","267.3","260.6","-0.04","3475.0","3387.16","-6.8","0.93240","1.00000"]
["ID=gene-49.2","hypothetical protein","24","239.3","252.1","0.08","5742.4","6050.81","12.9","0.81740","1.00000"]
["ID=gene-49.3","hypothetical protein","23","168.7","185.5","0.14","3880.3","4265.97","16.8","0.79000","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.3","0.16","6.4","12.65","0.1","0.73690","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.3","0.5","0.26","6.0","11.89","0.2","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.2","0.2","-0.02","19.7","18.40","-0.0","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","261.2","262.5","0.01","3918.4","3936.99","1.2","0.98640","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.1","0.0","-0.12","4.8","0.00","-0.1","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","229.6","161.0","-0.51","4133.1","2898.30","-68.6","0.13280","1.00000"]
["ID=gene-55.2","hypothetical protein","23","109.7","70.1","-0.64","2523.9","1613.06","-39.6","0.43850","1.00000"]
["ID=gene-55.3","hypothetical protein","9","212.4","228.5","0.11","1911.2","2056.68","16.2","0.84020","1.00000"]
["ID=gene-55.4","hypothetical protein","11","163.3","159.9","-0.03","1796.2","1758.38","-3.4","0.94040","1.00000"]
["ID=gene-55.5","hypothetical protein","25","222.1","195.5","-0.18","5551.4","4886.73","-26.6","0.59640","1.00000"]
["ID=gene-55.6","hypothetical protein","20","574.3","608.4","0.08","11485.2","12168.33","34.2","0.85990","1.00000"]
["ID=gene-55.8","hypothetical protein","20","385.3","389.1","0.01","7705.0","7782.35","3.9","0.97290","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","11.1","13.0","0.21","88.8","103.91","1.9","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","156.5","228.6","0.54","5478.7","7999.36","72.0","0.02570","0.55749"]
["ID=gene-61","gp61 DNA primase subunit","99","11.5","13.3","0.19","1135.7","1312.84","1.8","0.86150","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","11.3","10.0","-0.16","713.6","630.73","-1.3","0.87050","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","243.1","177.3","-0.45","7536.6","5496.38","-65.8","0.38850","1.00000"]
["ID=gene-61.1","hypothetical protein","12","116.5","112.7","-0.05","1397.8","1352.72","-3.8","0.90460","1.00000"]
["ID=gene-61.2","hypothetical protein","58","159.5","149.9","-0.09","9252.0","8694.51","-9.6","0.71980","1.00000"]
["ID=gene-61.4","hypothetical protein","21","296.0","287.1","-0.04","6216.8","6028.57","-9.0","0.91470","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","3.2","2.6","-0.21","158.0","129.60","-0.6","0.82820","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","62.4","64.9","0.06","4058.7","4221.49","2.5","0.84410","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","370.7","383.1","0.05","34109.0","35248.89","12.4","0.86440","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","52.4","24.4","-1.07","995.8","463.94","-28.0","0.00280","0.06580"]
["ID=gene-SegG","SegG homing endonuclease","63","351.7","383.8","0.13","22158.7","24179.84","32.1","0.72640","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","187.1","340.3","0.86","17960.4","32667.30","153.2","0.00000","0.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","200.4","266.9","0.41","3607.3","4805.06","66.5","0.61000","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","29.3","39.9","0.43","381.1","518.77","10.6","0.52660","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","33.4","47.2","0.49","835.4","1179.79","13.8","0.34290","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","17.7","23.3","0.38","424.9","558.26","5.6","0.33870","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","387.0","365.9","-0.08","6965.7","6586.45","-21.1","0.89170","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","605.0","460.2","-0.39","24198.5","18408.16","-144.8","0.27280","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","225.7","177.1","-0.35","40183.4","31520.10","-48.7","0.04160","0.76140"]
["ID=gene-alt.-1","hypothetical protein","17","164.7","211.1","0.36","2799.2","3588.08","46.4","0.35300","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","160.7","218.4","0.44","3054.1","4149.03","57.6","0.18990","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","222.8","272.3","0.29","4010.9","4900.92","49.4","0.53400","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","209.2","225.3","0.11","3765.7","4055.09","16.1","0.79840","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","235.8","280.5","0.25","6365.9","7573.00","44.7","0.49160","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","453.3","427.4","-0.08","5439.7","5128.67","-25.9","0.88800","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","247.3","244.2","-0.02","5192.4","5127.52","-3.1","0.96720","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","426.8","440.9","0.05","14083.0","14551.31","14.2","0.89510","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","231.9","243.6","0.07","3709.8","3897.50","11.7","0.83890","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","24.2","29.5","0.28","531.9","649.14","5.3","0.76800","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","142.1","178.3","0.33","1563.0","1960.83","36.2","0.55780","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","380.2","224.3","-0.76","37254.8","21977.07","-155.9","0.00020","0.00627"]
["ID=gene-cd","Cd dCMP deaminase","39","43.0","9.0","-2.14","1675.6","350.45","-34.0","0.06380","0.96622"]
["ID=gene-cd.1","hypothetical protein","32","164.1","130.5","-0.33","5250.3","4175.10","-33.6","0.25680","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","134.9","133.8","-0.01","2562.8","2542.10","-1.1","0.97060","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","309.7","251.6","-0.30","5885.1","4779.76","-58.2","0.50710","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","286.2","36.7","-2.93","4579.4","587.40","-249.5","0.00000","0.00000"]
["ID=gene-cd.5","hypothetical protein","21","469.3","489.3","0.06","9854.6","10275.75","20.1","0.90800","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","111.8","6.1","-3.99","1900.3","103.91","-105.7","0.00000","0.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","179.9","176.3","-0.03","14573.5","14276.77","-3.7","0.89460","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","82.2","84.8","0.04","10277.9","10603.19","2.6","0.80740","1.00000"]
["ID=gene-dda.1","hypothetical protein","33","147.3","103.8","-0.50","4862.4","3423.97","-43.6","0.14070","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","77.0","90.8","0.23","3467.0","4087.29","13.8","0.43140","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","223.6","260.2","0.22","7825.2","9107.07","36.6","0.56730","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","168.9","167.5","-0.01","2196.2","2177.85","-1.4","0.98060","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","460.2","554.3","0.27","17948.4","21618.95","94.1","0.50430","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","168.1","179.6","0.09","6725.7","7184.97","11.5","0.74420","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","334.8","291.6","-0.20","7700.6","6706.84","-43.2","0.61530","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","311.2","286.4","-0.12","7469.0","6872.48","-24.9","0.79720","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","45.6","10.6","-2.01","957.2","221.62","-35.0","0.00060","0.01538"]
["ID=gene-e","e Lysozyme murein hydrolase","44","2.5","4.5","0.67","108.1","198.61","2.1","0.74590","1.00000"]
["ID=gene-e.2","hypothetical protein","26","148.5","133.6","-0.15","3859.7","3473.05","-14.9","0.67520","1.00000"]
["ID=gene-e.3","hypothetical protein","37","229.7","239.5","0.06","8498.2","8862.83","9.9","0.88640","1.00000"]
["ID=gene-e.4","hypothetical protein","42","167.9","197.2","0.23","7053.8","8280.80","29.2","0.51390","1.00000"]
["ID=gene-e.5","hypothetical protein","52","343.2","383.8","0.16","17848.3","19955.28","40.5","0.69990","1.00000"]
["ID=gene-e.6","hypothetical protein","42","409.8","523.1","0.35","17212.3","21971.32","113.3","0.30430","1.00000"]
["ID=gene-e.7","hypothetical protein","29","286.0","343.6","0.26","8293.2","9964.03","57.6","0.50750","1.00000"]
["ID=gene-e.8","hypothetical protein","22","312.0","351.8","0.17","6864.8","7740.55","39.8","0.71850","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","162.0","165.2","0.03","8909.1","9084.45","3.2","0.92570","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","154.0","187.0","0.28","1848.1","2244.56","33.0","0.61520","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","444.1","492.5","0.15","10658.6","11820.95","48.4","0.69170","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","1076.9","269.7","-1.99","18307.0","4584.59","-807.2","0.75660","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","110.3","94.4","-0.22","3861.0","3303.58","-15.9","0.45130","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","11.0","7.0","-0.59","828.6","523.37","-4.1","0.69550","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.4","0.6","0.24","37.4","62.11","0.2","0.46770","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","444.7","460.8","0.05","8893.8","9215.20","16.1","0.91760","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","199.3","218.5","0.13","6178.2","6774.71","19.2","0.67930","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","422.4","511.4","0.28","9715.9","11762.28","89.0","0.42970","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","159.4","188.9","0.24","3506.8","4155.54","29.5","0.61260","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","355.7","380.4","0.10","16004.6","17119.09","24.8","0.88970","1.00000"]
["ID=gene-mobA","homing endonuclease","5","51.0","53.6","0.07","254.9","268.01","2.6","0.89900","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","327.9","312.3","-0.07","28523.8","27166.70","-15.6","0.84480","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","449.9","432.7","-0.06","28792.3","27695.83","-17.1","0.82980","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","228.6","249.7","0.13","18515.6","20227.89","21.1","0.48360","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","270.9","302.7","0.16","15980.5","17857.95","31.8","0.53000","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","690.3","711.6","0.04","9663.6","9962.49","21.3","0.90540","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","269.8","328.6","0.28","1888.3","2300.16","58.8","0.73970","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","443.9","507.1","0.19","8434.3","9635.82","63.2","0.75790","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","107.4","206.1","0.93","2040.2","3915.52","98.7","0.04320","0.76140"]
["ID=gene-mobD.5","hypothetical protein","12","416.4","447.9","0.10","4996.6","5374.45","31.5","0.84600","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","163.8","178.6","0.12","5405.9","5893.60","14.8","0.69890","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","69.2","60.9","-0.18","4291.9","3775.95","-8.3","0.50570","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","171.6","150.2","-0.19","3089.5","2702.75","-21.5","0.73900","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","134.2","115.1","-0.22","6306.0","5409.34","-19.1","0.61690","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","166.4","153.1","-0.12","1663.5","1530.63","-13.3","0.81270","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","110.1","108.8","-0.02","6384.8","6308.08","-1.3","0.95560","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","3.6","5.5","0.50","192.6","293.32","1.9","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","363.0","389.9","0.10","3630.2","3899.42","26.9","0.86560","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","237.8","244.9","0.04","9751.3","10041.86","7.1","0.88440","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","263.8","278.3","0.08","8177.4","8625.88","14.5","0.83340","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","244.7","211.5","-0.21","13461.1","11632.69","-33.2","0.40470","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","398.8","360.6","-0.14","22330.3","20191.08","-38.2","0.73530","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","514.0","501.1","-0.04","15935.1","15534.79","-12.9","0.89960","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","121.2","118.3","-0.03","1817.5","1774.48","-2.9","0.95520","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","221.7","235.5","0.09","8866.8","9420.33","13.8","0.73860","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","253.5","235.9","-0.10","5070.6","4718.79","-17.6","0.81370","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","131.8","121.8","-0.11","1054.5","974.66","-10.0","0.88980","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","224.0","224.3","0.00","1791.8","1794.42","0.3","0.99390","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","84.7","86.0","0.02","592.6","601.97","1.3","0.96570","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","376.4","378.2","0.01","6774.4","6806.92","1.8","0.98840","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","461.1","402.3","-0.20","4150.0","3620.28","-58.9","0.69370","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","169.8","242.2","0.51","1868.2","2664.41","72.4","0.39970","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.9","0.0","-0.89","154.0","0.00","-0.9","0.00000","0.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","264.5","253.3","-0.06","7935.4","7599.45","-11.2","0.90170","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","212.7","163.6","-0.38","6166.9","4745.25","-49.0","0.20470","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","0.4","0.0","-0.46","13.7","0.00","-0.4","0.49450","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","267.3","326.7","0.29","5612.5","6860.98","59.4","0.68400","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","25.1","15.8","-0.63","476.0","300.22","-9.3","0.27470","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","195.5","6.1","-4.80","5474.6","169.47","-189.5","0.00000","0.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","247.2","330.8","0.42","17305.6","23153.03","83.5","0.27240","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","281.6","312.1","0.15","19147.2","21220.19","30.5","0.54730","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","277.0","273.3","-0.02","5541.0","5466.85","-3.7","0.95620","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","159.6","149.8","-0.09","15004.0","14083.14","-9.8","0.73710","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","183.4","153.0","-0.26","18335.9","15300.90","-30.4","0.27970","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","240.7","239.9","-0.00","19492.9","19429.60","-0.8","0.98660","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","211.4","220.6","0.06","17126.3","17871.37","9.2","0.79300","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","451.1","411.9","-0.13","23909.5","21830.98","-39.2","0.69860","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","392.0","416.0","0.09","16071.8","17054.68","24.0","0.81780","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","150.1","174.0","0.21","2552.0","2958.50","23.9","0.55290","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","330.8","341.9","0.05","13233.1","13674.03","11.0","0.88090","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","330.4","355.9","0.11","11896.0","12814.01","25.5","0.73140","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2134.1","2577.6","0.27","49084.1","59284.17","443.5","0.71070","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","136.0","158.8","0.22","5305.8","6193.44","22.8","0.49260","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","312.6","259.8","-0.27","12193.1","10133.12","-52.8","0.48230","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","321.9","7.4","-5.27","22210.1","509.95","-314.5","0.00000","0.00000"]
["ID=gene-pseT.1","hypothetical protein","16","118.9","107.0","-0.15","1901.9","1711.99","-11.9","0.78630","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.8","1.3","0.32","24.1","37.58","0.4","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.0","0.7","0.79","0.0","20.32","0.7","0.49100","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","135.5","193.0","0.51","3117.2","4439.28","57.5","0.48810","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","294.4","379.9","0.37","3238.6","4178.93","85.5","0.32860","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","761.2","755.6","-0.01","12178.7","12088.96","-5.6","0.98780","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","420.1","304.0","-0.47","81498.9","58975.13","-116.1","0.49490","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","118.7","122.6","0.05","2373.1","2452.76","4.0","0.89760","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","388.6","293.3","-0.40","26422.1","19944.16","-95.3","0.06510","0.96622"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","12.9","19.4","0.55","142.3","213.18","6.4","0.47150","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","40.8","20.9","-0.93","1222.9","628.05","-19.8","0.04970","0.82444"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","178.6","288.6","0.69","4644.1","7503.60","110.0","0.13600","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","12.0","3.4","-1.57","937.5","263.80","-8.6","0.00000","0.00000"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","8.8","5.4","-0.60","754.6","467.01","-3.3","0.50360","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","278.0","320.5","0.20","23073.3","26599.24","42.5","0.36870","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","51.5","22.3","-1.17","1442.8","623.45","-29.3","0.00010","0.00353"]
["ID=gene-segA","SegA homing endonuclease","62","202.5","221.5","0.13","12554.9","13730.40","19.0","0.69940","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","162.6","178.8","0.14","10569.8","11620.42","16.2","0.59800","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","171.8","208.7","0.28","11165.6","13565.91","36.9","0.25260","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","238.8","237.0","-0.01","14330.2","14222.33","-1.8","0.96390","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","443.6","466.4","0.07","7098.0","7461.80","22.7","0.89350","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","183.8","166.2","-0.14","3860.6","3491.07","-17.6","0.69600","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","158.4","190.5","0.26","9819.2","11810.59","32.1","0.33820","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","446.1","463.2","0.05","4014.9","4168.96","17.1","0.91260","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","246.6","241.2","-0.03","1479.8","1447.04","-5.5","0.93220","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","38.9","55.8","0.51","1478.6","2119.57","16.9","0.15090","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","127.7","157.7","0.30","5746.0","7097.55","30.0","0.34850","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","164.6","214.3","0.38","3456.5","4499.86","49.7","0.27940","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","227.9","273.1","0.26","3645.9","4369.49","45.2","0.58020","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","767.3","814.9","0.09","17647.3","18743.66","47.7","0.81010","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","289.6","316.2","0.13","13322.8","14545.94","26.6","0.76690","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","129.0","141.0","0.13","3095.1","3384.10","12.0","0.80450","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","178.5","212.4","0.25","7139.8","8497.43","33.9","0.42440","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","204.1","212.4","0.06","3265.6","3398.28","8.3","0.89620","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","126","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.8","7.6","0.15","670.2","756.49","0.9","0.84530","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.5","0.2","-0.23","18.1","9.59","-0.2","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","164.8","194.4","0.24","3295.7","3887.91","29.6","0.61080","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","14.0","23.0","0.68","140.3","230.05","9.0","0.54560","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","26.6","12.4","-1.04","849.9","397.23","-14.1","0.13290","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","22.6","9.3","-1.20","1155.0","473.91","-13.4","0.00060","0.01538"]
["ID=gene-vs.3","hypothetical protein","20","652.1","694.9","0.09","13041.8","13898.72","42.8","0.86200","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","265.2","305.3","0.20","5834.0","6716.05","40.1","0.58680","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","243.4","263.1","0.11","4138.3","4472.25","19.6","0.81350","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","185.5","219.0","0.24","4265.8","5037.03","33.5","0.60180","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","129.6","145.7","0.17","3370.1","3788.61","16.1","0.74130","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","409.6","424.4","0.05","24165.5","25042.54","14.9","0.86480","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.5","0.0","-0.62","28.1","0.00","-0.5","0.04120","0.76140"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","282.4","302.5","0.10","26265.7","28131.01","20.1","0.59270","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","33.6","48.7","0.52","1041.2","1511.07","15.2","0.48410","1.00000"]
["ID=rnaC","rnaC","11","79.9","85.9","0.10","879.2","944.37","5.9","0.87750","1.00000"]
["ID=rnaD","rnaD","7","61.8","82.0","0.40","432.6","573.98","20.2","0.58590","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","70.4","60.8","-0.21","351.8","304.05","-9.5","0.57600","1.00000"]
["ID=tRNA-Ile","tRNA-Ile","4","175.4","200.1","0.19","701.5","800.20","24.7","0.67400","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","307.7","381.3","0.31","1231.0","1525.26","73.6","0.68240","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","63.4","68.5","0.11","190.2","205.51","5.1","1.00000","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","181.3","222.5","0.29","543.9","667.54","41.2","0.49520","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","170.5","203.9","0.26","1022.7","1223.12","33.4","0.62140","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","55.5","38.7","-0.51","111.0","77.45","-16.8","0.66140","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","81.2","87.0","0.10","406.0","434.80","5.8","0.81450","1.00000"]

{"sheet":"Data S30","index":30,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_K-12_vs_CFE331"]
[]
["#Resampling"]
["#Console: python3 ../../transit/src/transit.py resampling ../../hiden-seq/LB_2_R1_001_fastp_subsampled5M_edited10min.wig T4_331_allmerged_fastp_subsampleds12_edited10min.wig ../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table -n TTR resampling/T4_BW_331"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'../../hiden-seq/LB_2_R1_001_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'T4_331_allmerged_fastp_subsampleds12_edited10min.wig'"]
["#Annotation path: b'../../hiden-seq/02122024_AF158101.6/021224_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 9"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.9","2.1","-0.31","200.2","148.28","-0.8","0.78600","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","400.1","287.1","-0.48","9201.7","6603.92","-112.9","0.62230","1.00000"]
["ID=gene-24.3","hypothetical protein","14","227.5","263.8","0.21","3184.8","3692.92","36.3","0.74520","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.9","4.8","0.24","450.7","555.30","0.9","0.86810","1.00000"]
["ID=gene-30.1","hypothetical protein","21","402.6","345.0","-0.22","8455.2","7245.59","-57.6","0.51480","1.00000"]
["ID=gene-30.2","hypothetical protein","71","329.2","296.6","-0.15","23371.2","21058.03","-32.6","0.45220","1.00000"]
["ID=gene-30.3","hypothetical protein","28","270.8","296.5","0.13","7581.6","8303.06","25.8","0.72690","1.00000"]
["ID=gene-30.4","hypothetical protein","21","356.5","442.5","0.31","7485.9","9292.50","86.0","0.42300","1.00000"]
["ID=gene-30.5","hypothetical protein","20","707.3","469.3","-0.59","14146.5","9386.13","-238.0","0.57990","1.00000"]
["ID=gene-30.6","hypothetical protein","21","181.0","201.4","0.15","3800.3","4228.73","20.4","0.73050","1.00000"]
["ID=gene-30.7","hypothetical protein","28","296.2","331.5","0.16","8294.4","9282.94","35.3","0.72730","1.00000"]
["ID=gene-30.8","hypothetical protein","24","256.2","277.4","0.11","6149.2","6657.43","21.2","0.70420","1.00000"]
["ID=gene-30.9","hypothetical protein","5","128.0","215.0","0.74","640.0","1075.05","87.0","0.44620","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","2.4","6.5","1.15","45.0","123.44","4.1","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","96.3","167.2","0.79","1636.6","2842.21","70.9","0.08400","1.00000"]
["ID=gene-31.2","hypothetical protein","24","202.7","266.1","0.39","4866.0","6387.23","63.4","0.49590","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","14.9","18.9","0.32","343.7","435.68","4.0","0.74340","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","4.3","4.0","-0.07","480.4","450.58","-0.3","0.91520","1.00000"]
["ID=gene-39.1","hypothetical protein","25","239.4","252.2","0.08","5984.4","6306.21","12.9","0.80130","1.00000"]
["ID=gene-39.2","hypothetical protein","11","96.4","102.7","0.09","1060.9","1130.08","6.3","0.81880","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","10.5","11.1","0.07","283.0","299.24","0.6","0.92740","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","3.1","3.5","0.13","176.1","198.35","0.4","0.86670","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.2","0.2","-0.04","11.7","9.94","-0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.0","5.8","0.46","87.6","128.41","1.9","0.63220","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","228.0","260.2","0.19","4104.6","4682.75","32.1","0.66960","1.00000"]
["ID=gene-46.2","hypothetical protein","24","234.6","229.6","-0.03","5629.4","5509.38","-5.0","0.95930","1.00000"]
["ID=gene-47.1","hypothetical protein","12","168.9","165.0","-0.03","2026.6","1980.03","-3.9","0.96330","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","12.7","12.9","0.02","418.9","426.12","0.2","1.00000","1.00000"]
["ID=gene-49.1","hypothetical protein","13","267.3","281.6","0.08","3475.0","3661.20","14.3","0.87040","1.00000"]
["ID=gene-49.2","hypothetical protein","24","239.3","273.8","0.19","5742.4","6572.20","34.6","0.56890","1.00000"]
["ID=gene-49.3","hypothetical protein","23","168.7","203.9","0.27","3880.3","4690.01","35.2","0.60500","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.2","0.06","6.4","8.79","0.1","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.3","0.0","-0.32","6.0","0.00","-0.3","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.2","0.3","0.09","19.7","27.13","0.1","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","261.2","315.9","0.27","3918.4","4737.78","54.6","0.58360","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.0","0.1","0.09","0.0","5.35","0.1","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.1","0.1","0.00","4.8","4.97","0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","229.6","201.0","-0.19","4133.1","3617.63","-28.6","0.55740","1.00000"]
["ID=gene-55.2","hypothetical protein","23","109.7","115.5","0.07","2523.9","2657.62","5.8","0.90310","1.00000"]
["ID=gene-55.3","hypothetical protein","9","212.4","242.9","0.19","1911.2","2186.02","30.5","0.70290","1.00000"]
["ID=gene-55.4","hypothetical protein","11","163.3","166.2","0.03","1796.2","1828.31","2.9","0.94820","1.00000"]
["ID=gene-55.5","hypothetical protein","25","222.1","210.5","-0.08","5551.4","5262.12","-11.6","0.82680","1.00000"]
["ID=gene-55.6","hypothetical protein","20","574.3","616.5","0.10","11485.2","12330.76","42.3","0.82420","1.00000"]
["ID=gene-55.8","hypothetical protein","20","385.3","414.1","0.10","7705.0","8282.80","28.9","0.82300","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","11.1","2.1","-1.94","88.8","17.20","-9.0","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","156.5","19.2","-2.96","5478.7","673.39","-137.3","0.00000","0.00000"]
["ID=gene-61","gp61 DNA primase subunit","99","11.5","14.8","0.34","1135.7","1465.25","3.3","0.76770","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","11.3","13.0","0.18","713.6","816.70","1.6","0.87800","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","243.1","191.4","-0.34","7536.6","5933.21","-51.7","0.50650","1.00000"]
["ID=gene-61.1","hypothetical protein","12","116.5","123.6","0.08","1397.8","1482.83","7.1","0.82690","1.00000"]
["ID=gene-61.2","hypothetical protein","58","159.5","174.8","0.13","9252.0","10135.57","15.2","0.59600","1.00000"]
["ID=gene-61.4","hypothetical protein","21","296.0","316.5","0.10","6216.8","6646.34","20.5","0.80490","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","3.2","6.9","0.91","158.0","338.60","3.7","0.51650","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","62.4","94.3","0.59","4058.7","6130.03","31.9","0.04120","0.68344"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","370.7","426.0","0.20","34109.0","39194.36","55.3","0.46570","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","52.4","60.0","0.19","995.8","1139.64","7.6","0.58170","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","351.7","397.8","0.18","22158.7","25059.36","46.0","0.62490","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","187.1","124.0","-0.59","17960.4","11906.93","-63.1","0.00080","0.02507"]
["ID=gene-a-gt.2","hypothetical protein","18","200.4","305.9","0.61","3607.3","5506.71","105.5","0.47460","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","29.3","32.3","0.14","381.1","420.39","3.0","0.83490","1.00000"]
["ID=gene-a-gt.4","hypothetical protein","25","33.4","47.8","0.51","835.4","1196.20","14.4","0.36470","1.00000"]
["ID=gene-a-gt.5","hypothetical protein","24","17.7","29.6","0.71","424.9","709.69","11.9","0.10230","1.00000"]
["ID=gene-ac","Ac acridine resistance protein","18","387.0","404.5","0.06","6965.7","7280.37","17.5","0.91360","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","605.0","506.8","-0.25","24198.5","20272.67","-98.1","0.46710","1.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","225.7","4.7","-5.32","40183.4","828.93","-221.1","0.00000","0.00000"]
["ID=gene-alt.-1","hypothetical protein","17","164.7","210.2","0.35","2799.2","3574.07","45.6","0.35560","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","160.7","213.8","0.41","3054.1","4062.48","53.1","0.23200","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","222.8","245.2","0.14","4010.9","4413.32","22.4","0.76500","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","209.2","251.6","0.27","3765.7","4529.11","42.4","0.50920","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","235.8","288.4","0.29","6365.9","7785.98","52.6","0.41960","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","453.3","428.8","-0.08","5439.7","5145.94","-24.5","0.89130","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","247.3","245.5","-0.01","5192.4","5155.49","-1.8","0.97980","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","426.8","462.1","0.11","14083.0","15249.02","35.3","0.73740","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","231.9","264.4","0.19","3709.8","4230.64","32.6","0.57840","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","24.2","22.2","-0.12","531.9","487.65","-2.0","0.89230","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","142.1","190.0","0.42","1563.0","2090.10","47.9","0.44640","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","380.2","205.1","-0.89","37254.8","20100.31","-175.0","0.00010","0.00470"]
["ID=gene-cd","Cd dCMP deaminase","39","43.0","19.0","-1.13","1675.6","742.94","-23.9","0.65530","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","164.1","160.5","-0.03","5250.3","5136.77","-3.5","0.91160","1.00000"]
["ID=gene-cd.2","hypothetical protein","19","134.9","150.5","0.16","2562.8","2859.41","15.6","0.62070","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","309.7","474.8","0.61","5885.1","9021.54","165.1","0.23470","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","286.2","330.4","0.21","4579.4","5285.81","44.2","0.70990","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","469.3","538.6","0.20","9854.6","11309.60","69.3","0.68850","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","111.8","160.7","0.52","1900.3","2731.76","48.9","0.43250","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","179.9","201.1","0.16","14573.5","16285.85","21.1","0.45130","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","82.2","175.2","1.08","10277.9","21901.86","93.0","0.00000","0.00000"]
["ID=gene-dda.1","hypothetical protein","33","147.3","129.9","-0.18","4862.4","4287.58","-17.4","0.58920","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","77.0","87.1","0.18","3467.0","3921.08","10.1","0.49090","1.00000"]
["ID=gene-denB","DenB DNA endonuclease IV","35","223.6","243.5","0.12","7825.2","8522.81","19.9","0.74490","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","168.9","190.1","0.17","2196.2","2471.88","21.2","0.73090","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","460.2","557.7","0.28","17948.4","21749.76","97.5","0.48310","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","168.1","196.9","0.23","6725.7","7877.32","28.8","0.43630","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","334.8","314.5","-0.09","7700.6","7234.51","-20.3","0.82880","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","311.2","318.8","0.03","7469.0","7650.31","7.6","0.93660","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","45.6","39.0","-0.22","957.2","818.99","-6.6","0.65470","1.00000"]
["ID=gene-e","e Lysozyme murein hydrolase","44","2.5","4.4","0.65","108.1","194.53","2.0","0.61360","1.00000"]
["ID=gene-e.2","hypothetical protein","26","148.5","160.9","0.12","3859.7","4183.25","12.4","0.74980","1.00000"]
["ID=gene-e.3","hypothetical protein","37","229.7","242.2","0.08","8498.2","8960.01","12.5","0.85670","1.00000"]
["ID=gene-e.4","hypothetical protein","42","167.9","189.8","0.18","7053.8","7973.63","21.9","0.61260","1.00000"]
["ID=gene-e.5","hypothetical protein","52","343.2","368.1","0.10","17848.3","19140.29","24.8","0.78700","1.00000"]
["ID=gene-e.6","hypothetical protein","42","409.8","464.5","0.18","17212.3","19509.85","54.7","0.58390","1.00000"]
["ID=gene-e.7","hypothetical protein","29","286.0","327.2","0.19","8293.2","9488.94","41.2","0.62620","1.00000"]
["ID=gene-e.8","hypothetical protein","22","312.0","340.0","0.12","6864.8","7479.86","28.0","0.79520","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","162.0","194.4","0.26","8909.1","10691.63","32.4","0.38130","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","154.0","183.3","0.25","1848.1","2199.01","29.2","0.66080","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","444.1","471.9","0.09","10658.6","11325.27","27.8","0.82020","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","1076.9","266.3","-2.01","18307.0","4526.82","-810.6","0.73420","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","110.3","123.5","0.16","3861.0","4323.51","13.2","0.58090","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","11.0","9.8","-0.16","828.6","731.86","-1.3","0.87520","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.4","0.2","-0.19","37.4","20.64","-0.2","0.50720","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","444.7","502.7","0.18","8893.8","10054.93","58.1","0.70110","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","199.3","233.4","0.23","6178.2","7236.42","34.1","0.48340","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","422.4","840.1","0.99","9715.9","19322.97","417.7","0.01110","0.24078"]
["ID=gene-ipII","IpII internal head protein","22","159.4","163.9","0.04","3506.8","3605.02","4.5","0.93250","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","355.7","234.9","-0.60","16004.6","10568.95","-120.8","0.40170","1.00000"]
["ID=gene-mobA","homing endonuclease","5","51.0","60.1","0.23","254.9","300.39","9.1","0.72300","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","327.9","341.3","0.06","28523.8","29691.66","13.4","0.86540","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","449.9","460.1","0.03","28792.3","29445.16","10.2","0.89590","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","228.6","244.6","0.10","18515.6","19814.06","16.0","0.59940","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","270.9","287.2","0.08","15980.5","16946.25","16.4","0.73750","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","690.3","683.4","-0.01","9663.6","9568.04","-6.8","0.97220","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","269.8","301.3","0.16","1888.3","2108.82","31.5","0.81510","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","443.9","484.0","0.12","8434.3","9195.43","40.1","0.83030","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","107.4","196.9","0.87","2040.2","3740.31","89.5","0.05570","0.87263"]
["ID=gene-mobD.5","hypothetical protein","12","416.4","436.2","0.07","4996.6","5234.98","19.9","0.90160","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","163.8","177.4","0.11","5405.9","5855.63","13.6","0.73400","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","69.2","77.8","0.17","4291.9","4826.06","8.6","0.54320","1.00000"]
["ID=gene-modA.2","hypothetical protein","18","171.6","213.0","0.31","3089.5","3833.18","41.3","0.58060","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","134.2","149.9","0.16","6306.0","7043.80","15.7","0.70850","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","166.4","173.7","0.06","1663.5","1737.35","7.4","0.90170","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","110.1","123.4","0.16","6384.8","7157.69","13.3","0.58450","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","3.6","4.9","0.36","192.6","261.79","1.3","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","363.0","402.6","0.15","3630.2","4026.18","39.6","0.80520","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","237.8","257.7","0.12","9751.3","10564.37","19.8","0.71630","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","263.8","299.5","0.18","8177.4","9284.86","35.7","0.62460","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","244.7","242.2","-0.02","13461.1","13318.68","-2.6","0.95260","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","398.8","399.9","0.00","22330.3","22395.63","1.2","0.99160","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","514.0","538.5","0.07","15935.1","16692.48","24.4","0.81830","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","121.2","125.4","0.05","1817.5","1881.43","4.3","0.93420","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","221.7","271.2","0.29","8866.8","10848.32","49.5","0.28130","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","253.5","269.4","0.09","5070.6","5387.85","15.9","0.83370","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","131.8","133.7","0.02","1054.5","1069.70","1.9","0.97100","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","224.0","249.2","0.15","1791.8","1993.79","25.3","0.72740","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","84.7","95.4","0.17","592.6","667.65","10.7","0.82350","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","376.4","407.7","0.12","6774.4","7338.07","31.3","0.81500","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","461.1","434.4","-0.09","4150.0","3909.61","-26.7","0.87150","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","169.8","216.2","0.35","1868.2","2378.25","46.4","0.55680","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.9","1.7","0.55","154.0","307.65","0.9","0.00450","0.12690"]
["ID=gene-nrdA.1","hypothetical protein","30","264.5","284.9","0.11","7935.4","8545.74","20.3","0.84030","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","212.7","199.5","-0.09","6166.9","5784.55","-13.2","0.75660","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","36","0.4","1.8","1.02","13.7","64.97","1.4","0.01660","0.33437"]
["ID=gene-nrdB.1","hypothetical protein","21","267.3","328.9","0.30","5612.5","6906.98","61.6","0.66880","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","25.1","29.8","0.24","476.0","566.38","4.8","0.64830","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","195.5","207.5","0.09","5474.6","5808.62","11.9","0.83600","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","247.2","240.7","-0.04","17305.6","16851.09","-6.5","0.91880","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","281.6","311.9","0.15","19147.2","21209.37","30.3","0.53640","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","277.0","323.2","0.22","5541.0","6463.67","46.1","0.66560","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","159.6","167.5","0.07","15004.0","15744.32","7.9","0.80030","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","183.4","181.0","-0.02","18335.9","18103.84","-2.3","0.93960","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","240.7","244.8","0.02","19492.9","19825.91","4.1","0.92750","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","211.4","221.5","0.07","17126.3","17938.75","10.0","0.77590","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","451.1","409.6","-0.14","23909.5","21706.57","-41.6","0.68240","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","392.0","427.0","0.12","16071.8","17507.27","35.0","0.73330","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","150.1","175.1","0.22","2552.0","2977.12","25.0","0.51030","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","330.8","369.1","0.16","13233.1","14763.67","38.3","0.58690","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","330.4","334.0","0.02","11896.0","12023.50","3.5","0.96280","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","2134.1","2742.6","0.36","49084.1","63080.84","608.6","0.61410","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","136.0","147.4","0.12","5305.8","5749.77","11.4","0.70160","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","312.6","289.4","-0.11","12193.1","11285.14","-23.3","0.76600","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","321.9","370.1","0.20","22210.1","25537.46","48.2","0.48510","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","118.9","143.2","0.27","1901.9","2291.88","24.4","0.61610","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.8","0.9","0.11","24.1","28.28","0.1","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.0","0.8","0.83","0.0","21.78","0.8","0.49090","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","135.5","110.7","-0.29","3117.2","2545.64","-24.9","0.68570","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","294.4","321.1","0.12","3238.6","3532.03","26.7","0.73490","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","761.2","498.3","-0.61","12178.7","7972.48","-262.9","0.39470","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","420.1","1.7","-7.30","81498.9","324.46","-418.4","0.00000","0.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","118.7","138.4","0.22","2373.1","2768.83","19.8","0.53990","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","388.6","37.8","-3.33","26422.1","2568.96","-350.8","0.00000","0.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","12.9","12.5","-0.04","142.3","137.96","-0.4","0.94280","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","40.8","60.3","0.55","1222.9","1809.20","19.5","0.22510","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","178.6","277.4","0.63","4644.1","7212.72","98.8","0.12800","1.00000"]
["ID=gene-rnh","RNaseH ribonuclease","78","12.0","8.4","-0.47","937.5","656.95","-3.6","0.06400","0.94989"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","8.8","10.4","0.22","754.6","890.84","1.6","0.68470","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","278.0","250.1","-0.15","23073.3","20756.50","-27.9","0.49280","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","51.5","100.0","0.94","1442.8","2800.17","48.5","0.00050","0.01763"]
["ID=gene-segA","SegA homing endonuclease","62","202.5","226.8","0.16","12554.9","14061.23","24.3","0.61690","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","162.6","245.2","0.59","10569.8","15940.75","82.6","0.02340","0.41242"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","171.8","197.7","0.20","11165.6","12852.43","26.0","0.41040","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","238.8","275.9","0.21","14330.2","16554.14","37.1","0.39250","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","443.6","505.2","0.19","7098.0","8082.54","61.5","0.76060","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","183.8","217.9","0.24","3860.6","4574.97","34.0","0.51820","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","158.4","205.9","0.38","9819.2","12768.73","47.6","0.17520","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","446.1","493.0","0.14","4014.9","4437.01","46.9","0.77360","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","246.6","255.7","0.05","1479.8","1534.42","9.1","0.91030","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","38","38.9","75.0","0.93","1478.6","2849.09","36.1","0.00900","0.21150"]
["ID=gene-tk","Tk thymidine kinase","45","127.7","171.6","0.42","5746.0","7721.01","43.9","0.18850","1.00000"]
["ID=gene-tk.1","hypothetical protein","21","164.6","209.4","0.35","3456.5","4398.03","44.8","0.31700","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","227.9","263.2","0.21","3645.9","4210.77","35.3","0.65180","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","767.3","779.9","0.02","17647.3","17937.60","12.6","0.94830","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","289.6","312.9","0.11","13322.8","14391.43","23.2","0.78370","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","129.0","150.9","0.23","3095.1","3622.22","22.0","0.65770","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","178.5","214.5","0.26","7139.8","8580.13","36.0","0.39970","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","204.1","228.8","0.16","3265.6","3660.44","24.7","0.72450","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","126","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","6.8","6.6","-0.04","670.2","649.31","-0.2","0.96620","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.5","0.3","-0.21","18.1","10.32","-0.2","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","164.8","185.5","0.17","3295.7","3709.36","20.7","0.71280","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","14.0","24.1","0.74","140.3","240.77","10.0","0.56160","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","26.6","34.5","0.37","849.9","1105.24","8.0","0.76780","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","22.6","11.9","-0.87","1155.0","606.89","-10.7","0.00640","0.16407"]
["ID=gene-vs.3","hypothetical protein","20","652.1","708.5","0.12","13041.8","14170.15","56.4","0.82740","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","265.2","321.0","0.27","5834.0","7061.38","55.8","0.46530","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","243.4","273.5","0.17","4138.3","4649.50","30.1","0.71970","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","185.5","229.5","0.31","4265.8","5278.17","44.0","0.49620","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","129.6","138.9","0.10","3370.1","3611.52","9.3","0.84490","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","409.6","417.8","0.03","24165.5","24650.06","8.2","0.91990","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=id-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.5","2.7","1.28","28.1","142.17","2.2","0.00040","0.01611"]
["ID=id-nrdD","NrdD anaerobic NTP reductase, large subunit","93","282.4","309.0","0.13","26265.7","28733.94","26.5","0.48970","1.00000"]
["ID=id-td","dTMP (thymidylate) synthase","31","33.6","66.7","0.97","1041.2","2068.31","33.1","0.20370","1.00000"]
["ID=rnaC","rnaC","11","79.9","139.8","0.80","879.2","1537.86","59.9","0.32040","1.00000"]
["ID=rnaD","rnaD","7","61.8","92.5","0.57","432.6","647.78","30.7","0.52640","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","70.4","152.6","1.11","351.8","763.20","82.3","0.02040","0.38352"]
["ID=tRNA-Ile","tRNA-Ile","4","175.4","398.2","1.18","701.5","1592.89","222.8","0.34250","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","307.7","618.1","1.00","1231.0","2472.27","310.3","0.28450","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","63.4","99.6","0.64","190.2","298.86","36.2","0.29960","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","181.3","375.0","1.04","543.9","1125.11","193.7","0.29520","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","170.5","366.8","1.10","1022.7","2200.54","196.3","0.07870","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","55.5","111.2","0.99","111.0","222.42","55.7","0.67330","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","81.2","153.4","0.91","406.0","767.02","72.2","0.55990","1.00000"]

{"sheet":"Data S31","index":31,"n_rows":294,"n_cols":11,"rows_kept":294}
[]
["resampling_K-12_ΔRM_vs_Mokosh_type_I"]
[]
["#Resampling"]
["#Console: python3 ../../transit/src/transit.py resampling ../T4_RM_37_R1_merged_fastp_subsampled5M_edited10min.wig ../T4_Mok_R1_merged_fastp_subsampled5M_edited10min.wig ../../hiden-seq/02122024_AF158101.6/080825_AF158101.6.prot_table -n TTR T4_Mokosh"]
["#Parameters: samples=10000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0, site_restricted=False, winsorize=False"]
["#Control Data: b'../T4_RM_37_R1_merged_fastp_subsampled5M_edited10min.wig'"]
["#Experimental Data: b'../T4_Mok_R1_merged_fastp_subsampled5M_edited10min.wig'"]
["#Annotation path: b'../../hiden-seq/02122024_AF158101.6/080825_AF158101.6.prot_table' "]
["#Number of significant conditionally essential genes (Padj<0.05): 10"]
["#P-values smaller than 0.00001 are rounded and shown as 0.00000 by the tool"]
["#Orf","Desc","Sites","Mean Ctrl","Mean Exp","log2FC","Sum Ctrl","Sum Exp","Delta Mean","p-value","Adj. p-value"]
["ID=gene-1","gp1 dNMP kinase","69","2.0","3.7","0.65","137.5","254.27","1.7","0.56070","1.00000"]
["ID=gene-10","gp10 baseplate wedge subunit and tail pin","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-11","gp11 baseplate wedge subunit and tail pin","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-12","gp12 Short tail fibers","120","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-13","gp13 neck protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-14","gp14 neck protein","71","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-15","gp15 tail sheath stabilizer and completion protein","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-16","gp16 terminase DNA packaging enzyme, small subunit","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-17","gp17 terminase DNA packaging enzyme, large subunit","147","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-18","gp18 tail sheath protein","159","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-19","gp19 tail tube protein","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-2","gp2 DNA end protector protein","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-20","gp20 portal vertex protein of head","123","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-21","gp21 prohead core scaffold protein and protease","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-22","gp22 prohead core scaffold protein","44","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-23","gp23 major head protein","106","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24","gp24 head vertex protein","102","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-24.2","hypothetical protein","23","1067.1","2083.9","0.96","24542.8","47929.73","1016.8","0.71430","1.00000"]
["ID=gene-24.3","hypothetical protein","14","230.6","229.5","-0.01","3228.2","3213.65","-1.0","0.99120","1.00000"]
["ID=gene-25","gp25 baseplate wedge subunit","32","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-26","gp26 baseplate hub subunit","59","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-27","gp27 baseplate hub subunit","111","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-28","gp28 baseplate hub distal subunit","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-29","gp29 baseplate hub subunit","122","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-3","gp3 tail completion and sheath stabilizer protein","52","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-30","gp30 DNA ligase","115","3.3","4.1","0.25","374.9","469.12","0.8","0.81470","1.00000"]
["ID=gene-30.1","hypothetical protein","21","285.7","310.2","0.12","5998.9","6513.94","24.5","0.72430","1.00000"]
["ID=gene-30.2","hypothetical protein","71","201.6","250.6","0.31","14313.7","17791.83","49.0","0.20320","1.00000"]
["ID=gene-30.3","hypothetical protein","28","262.8","267.2","0.02","7358.1","7482.50","4.4","0.95100","1.00000"]
["ID=gene-30.4","hypothetical protein","21","411.6","436.0","0.08","8642.7","9156.68","24.5","0.83870","1.00000"]
["ID=gene-30.5","hypothetical protein","20","1173.4","2376.0","1.02","23467.6","47519.52","1202.6","0.77770","1.00000"]
["ID=gene-30.6","hypothetical protein","21","200.9","202.9","0.01","4219.2","4261.05","2.0","0.97320","1.00000"]
["ID=gene-30.7","hypothetical protein","28","301.1","291.6","-0.05","8432.0","8163.43","-9.6","0.92460","1.00000"]
["ID=gene-30.8","hypothetical protein","24","272.9","279.1","0.03","6549.0","6698.03","6.2","0.91640","1.00000"]
["ID=gene-30.9","hypothetical protein","5","117.4","104.5","-0.17","586.9","522.40","-12.9","0.78370","1.00000"]
["ID=gene-31","gp31 head assembly cochaperone with GroEL","19","3.3","4.6","0.40","62.2","87.93","1.4","1.00000","1.00000"]
["ID=gene-31.1","hypothetical protein","17","119.9","139.7","0.22","2039.1","2374.61","19.7","0.59430","1.00000"]
["ID=gene-31.2","hypothetical protein","24","229.8","255.4","0.15","5515.3","6130.59","25.6","0.76550","1.00000"]
["ID=gene-32","gp32 single-stranded DNA binding protein","55","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-33","gp33 late promoter transcription accessory protein","23","8.5","9.7","0.17","195.1","222.65","1.2","1.00000","1.00000"]
["ID=gene-34","gp34 long tail fiber, proximal subunit","316","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-35","gp35 hinge connector of long tail fiber, proximal connector","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-36","gp36 hinge connector of long tail fiber, distal connector","49","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-37","gp37 long tail fiber, distal subunit","249","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-38","gp38 distal long tail fiber assembly catalyst","46","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-39","DNA topoisomerase II large subunit","113","3.3","3.6","0.09","373.6","405.88","0.3","0.92070","1.00000"]
["ID=gene-39.1","hypothetical protein","25","284.5","271.5","-0.07","7112.6","6786.83","-13.0","0.82750","1.00000"]
["ID=gene-39.2","hypothetical protein","11","88.2","107.7","0.29","969.8","1184.71","19.5","0.48610","1.00000"]
["ID=gene-4","gp4 head completion protein","34","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-40","gp40 head vertex assembly chaperone","27","8.4","10.8","0.34","225.5","292.82","2.5","0.72880","1.00000"]
["ID=gene-41","gp41 DNA primase-helicase subunit","97","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-42","gp42 dCMP hydroxymethylase","57","2.8","2.9","0.03","162.1","167.20","0.1","0.92720","1.00000"]
["ID=gene-43","gp43 DNA polymerase","194","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-44","gp44 clamp loader subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45","gp45 sliding clamp","56","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-45.2","hypothetical protein","22","4.4","6.1","0.39","96.9","133.85","1.7","0.61840","1.00000"]
["ID=gene-46","gp46 recombination endonuclease subunit","148","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-46.1","hypothetical protein","18","235.2","248.8","0.08","4233.1","4478.06","13.6","0.85780","1.00000"]
["ID=gene-46.2","hypothetical protein","24","225.6","220.1","-0.04","5414.1","5282.88","-5.5","0.95430","1.00000"]
["ID=gene-47.1","hypothetical protein","12","171.3","174.4","0.03","2055.2","2093.05","3.2","0.96660","1.00000"]
["ID=gene-48","gp48 baseplate tail tube cap","113","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-49","gp49 EndoVII packaging and recombination endonuclease VII","33","12.2","13.5","0.13","403.7","443.99","1.2","0.80870","1.00000"]
["ID=gene-49.1","hypothetical protein","13","291.8","289.3","-0.01","3793.9","3760.31","-2.6","0.97690","1.00000"]
["ID=gene-49.2","hypothetical protein","24","231.5","247.1","0.09","5557.2","5929.60","15.5","0.77320","1.00000"]
["ID=gene-49.3","hypothetical protein","23","174.9","183.2","0.07","4022.0","4214.70","8.4","0.89720","1.00000"]
["ID=gene-5","gp5 baseplate hub subunit and tail lysozyme","129","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.1","hypothetical protein","45","0.1","0.2","0.05","6.3","8.23","0.0","1.00000","1.00000"]
["ID=gene-5.3","hypothetical protein","24","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-5.4","hypothetical protein","21","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-51","gp51 baseplate hub assembly","75","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-52","gp52 topoisomerase II, medium subunit","100","0.2","0.2","0.04","15.7","19.06","0.0","1.00000","1.00000"]
["ID=gene-52.1","hypothetical protein","15","218.1","252.0","0.21","3272.2","3779.37","33.8","0.67330","1.00000"]
["ID=gene-53","gp53 baseplate wedge subunit","63","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-54","gp54 baseplate tail tube initiator","86","0.1","0.1","-0.04","7.6","4.76","-0.0","1.00000","1.00000"]
["ID=gene-55","gp55 Sigma factor for T4 late transcription","54","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-55.1","hypothetical protein","18","173.8","174.2","0.00","3127.9","3134.82","0.4","0.99190","1.00000"]
["ID=gene-55.2","hypothetical protein","23","80.2","87.5","0.12","1844.9","2012.49","7.3","0.83720","1.00000"]
["ID=gene-55.3","hypothetical protein","9","209.6","231.9","0.15","1886.4","2086.99","22.3","0.77700","1.00000"]
["ID=gene-55.4","hypothetical protein","11","160.3","181.4","0.18","1762.8","1995.59","21.2","0.67910","1.00000"]
["ID=gene-55.5","hypothetical protein","25","235.7","233.6","-0.01","5892.3","5840.80","-2.1","0.97060","1.00000"]
["ID=gene-55.6","hypothetical protein","20","683.2","737.6","0.11","13664.2","14752.31","54.4","0.81720","1.00000"]
["ID=gene-55.8","hypothetical protein","20","467.2","461.8","-0.02","9344.7","9235.08","-5.5","0.97070","1.00000"]
["ID=gene-56","gp56 dCTPase","28","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-57A","gp57A chaperone for tail fiber formation","8","2.8","8.0","1.24","22.4","63.68","5.2","1.00000","1.00000"]
["ID=gene-57B","gp57B conserved hypothetical protein","35","54.1","107.4","0.98","1893.6","3759.44","53.3","0.00010","0.00353"]
["ID=gene-61","gp61 DNA primase subunit","99","10.5","10.5","0.00","1035.9","1038.30","0.0","0.99240","1.00000"]
["ID=gene-59","gp59 loader of gp41 DNA helicase","63","9.5","10.6","0.14","600.9","669.24","1.1","1.00000","1.00000"]
["ID=gene-6","gp6 baseplate wedge subunit","187","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60","DNA topoisomerase II","40","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-60.1","hypothetical protein","31","204.3","274.5","0.42","6331.9","8508.66","70.2","0.43020","1.00000"]
["ID=gene-61.1","hypothetical protein","12","120.0","136.7","0.19","1439.5","1640.83","16.8","0.67120","1.00000"]
["ID=gene-61.2","hypothetical protein","58","165.9","188.6","0.18","9619.3","10939.59","22.8","0.43490","1.00000"]
["ID=gene-61.4","hypothetical protein","21","311.0","336.2","0.11","6530.0","7060.16","25.2","0.79000","1.00000"]
["ID=gene-62","gp62 clamp loader subunit","49","1.5","3.0","0.70","72.4","148.58","1.6","0.67350","1.00000"]
["ID=gene-67","gp67 prohead core protein, precursor to internalpeptides","12","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-68","gp68 prohead core protein","27","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-7","gp7 baseplate wedge initiator","285","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-8","gp8 baseplate wedge subunit","77","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-9","gp9 baseplate wedge tail fiber connector","82","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-I-TevI","I-TevI homing endonuclease","65","50.0","52.1","0.06","3251.4","3383.45","2.0","0.84320","1.00000"]
["ID=gene-I-TevII","I-TevII homing endonuclease","92","410.7","408.7","-0.01","37788.1","37597.01","-2.1","0.97680","1.00000"]
["ID=gene-I-TevIII","I-TevIII homing endonuclease (defective)","19","60.7","47.8","-0.34","1153.9","907.91","-12.9","0.33280","1.00000"]
["ID=gene-SegG","SegG homing endonuclease","63","336.2","372.9","0.15","21181.8","23494.02","36.7","0.66920","1.00000"]
["ID=gene-a-gt","a-gt alpha glucosyl transferase","96","426.7","7.9","-5.59","40962.5","754.14","-418.8","0.00000","0.00000"]
["ID=gene-a-gt.2","hypothetical protein","18","158.3","299.9","0.92","2848.6","5398.10","141.6","0.32650","1.00000"]
["ID=gene-a-gt.3","hypothetical protein","13","20.4","54.7","1.38","264.9","710.82","34.3","0.06700","0.99442"]
["ID=gene-a-gt.4","hypothetical protein","25","17.0","58.1","1.71","426.1","1451.54","41.0","0.00320","0.06446"]
["ID=gene-a-gt.5","hypothetical protein","24","5.1","21.5","1.87","123.1","515.47","16.3","0.00070","0.01974"]
["ID=gene-ac","Ac acridine resistance protein","18","351.7","396.8","0.17","6329.8","7141.59","45.1","0.76730","1.00000"]
["ID=gene-alc","Alc inhibitor of host transcription","40","516.0","149.1","-1.78","20641.0","5965.98","-366.9","0.00000","0.00000"]
["ID=gene-alt","Alt RNA polymerase ADP-ribosylase","178","202.2","0.0","-7.67","35994.3","0.00","-202.2","0.00000","0.00000"]
["ID=gene-alt.-1","hypothetical protein","17","162.4","170.8","0.07","2761.0","2903.51","8.4","0.84340","1.00000"]
["ID=gene-alt.-2","hypothetical protein","19","153.8","175.4","0.19","2923.1","3331.91","21.5","0.59980","1.00000"]
["ID=gene-alt.-3","hypothetical protein","18","197.7","199.7","0.01","3558.6","3593.97","2.0","0.97780","1.00000"]
["ID=gene-alt.1","hypothetical protein","18","189.8","219.4","0.21","3415.6","3948.30","29.6","0.60190","1.00000"]
["ID=gene-arn","Arn inhibitor of MrcBC restriction endonuclease (anti-restriction nuclease)","27","239.0","221.4","-0.11","6454.2","5976.81","-17.7","0.73980","1.00000"]
["ID=gene-arn.1","hypothetical protein","12","419.1","425.4","0.02","5028.6","5104.42","6.3","0.97100","1.00000"]
["ID=gene-arn.2","hypothetical protein","21","254.4","235.2","-0.11","5343.0","4938.95","-19.2","0.78370","1.00000"]
["ID=gene-arn.3","hypothetical protein","33","465.4","471.0","0.02","15358.4","15542.40","5.6","0.96250","1.00000"]
["ID=gene-arn.4","hypothetical protein","16","213.2","254.1","0.25","3411.4","4065.26","40.9","0.46960","1.00000"]
["ID=gene-asiA","AsiA anti-sigma 70 protein","22","15.4","26.3","0.74","338.1","579.58","11.0","0.42810","1.00000"]
["ID=gene-asiA.1","hypothetical protein","11","143.6","225.4","0.65","1580.0","2479.44","81.8","0.28360","1.00000"]
["ID=gene-b-gt","b-gt beta glucosyl transferase","98","310.8","119.8","-1.37","30460.5","11739.21","-191.0","0.00000","0.00000"]
["ID=gene-cd","Cd dCMP deaminase","39","10.2","14.1","0.43","398.6","550.12","3.9","0.44520","1.00000"]
["ID=gene-cd.1","hypothetical protein","32","90.8","175.0","0.94","2906.6","5601.26","84.2","0.00270","0.06345"]
["ID=gene-cd.2","hypothetical protein","19","111.8","130.6","0.22","2123.8","2482.04","18.9","0.49840","1.00000"]
["ID=gene-cd.3","hypothetical protein","19","301.3","354.9","0.24","5724.7","6742.22","53.6","0.63730","1.00000"]
["ID=gene-cd.4","hypothetical protein","16","331.6","339.4","0.03","5305.4","5429.73","7.8","0.95120","1.00000"]
["ID=gene-cd.5","hypothetical protein","21","506.0","585.5","0.21","10625.6","12296.26","79.6","0.67650","1.00000"]
["ID=gene-cef","cef modifier of suppressor tRNAs","17","89.6","136.0","0.60","1523.7","2311.37","46.3","0.36980","1.00000"]
["ID=gene-dam","Dam DNA adenine methyltransferase","81","186.7","179.7","-0.05","15124.0","14559.55","-7.0","0.80070","1.00000"]
["ID=gene-dda","Dda DNA helicase","125","48.8","118.8","1.27","6101.3","14846.30","70.0","0.00000","0.00000"]
["ID=gene-dda.1","hypothetical protein","33","105.0","113.1","0.11","3465.6","3733.88","8.1","0.74270","1.00000"]
["ID=gene-denA","DenA endonuclease II","45","20.1","39.6","0.94","906.0","1781.18","19.4","0.00230","0.05896"]
["ID=gene-denB","DenB DNA endonuclease IV","35","194.3","195.2","0.01","6800.8","6831.45","0.9","0.98690","1.00000"]
["ID=gene-denB.1","hypothetical protein","13","147.5","159.8","0.11","1917.3","2077.03","12.3","0.80220","1.00000"]
["ID=gene-denV","DenV endonuclease V, N-glycosylase UV repair enzyme","39","465.3","512.8","0.14","18144.9","20000.54","47.6","0.73930","1.00000"]
["ID=gene-dexA","DexA exonuclease A","40","105.6","116.6","0.14","4225.5","4664.76","11.0","0.62420","1.00000"]
["ID=gene-dexA.1","hypothetical protein","23","314.2","319.8","0.03","7226.5","7355.15","5.6","0.95240","1.00000"]
["ID=gene-dexA.2","hypothetical protein","24","308.2","298.4","-0.05","7395.7","7160.65","-9.8","0.91740","1.00000"]
["ID=gene-dmd","Dmd discriminator of mRNA degradation","15","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-dsbA","DsbA dsDNA binding protein, late transcription","21","7.7","27.0","1.69","161.2","567.01","19.3","0.00320","0.06446"]
["ID=gene-e","e Lysozyme murein hydrolase","44","4.0","4.5","0.15","174.3","197.52","0.5","1.00000","1.00000"]
["ID=gene-e.2","hypothetical protein","26","152.5","153.5","0.01","3965.7","3990.32","0.9","0.97940","1.00000"]
["ID=gene-e.3","hypothetical protein","37","271.2","260.6","-0.06","10035.3","9643.12","-10.6","0.89110","1.00000"]
["ID=gene-e.4","hypothetical protein","42","182.7","185.3","0.02","7674.1","7780.95","2.5","0.95850","1.00000"]
["ID=gene-e.5","hypothetical protein","52","346.3","332.5","-0.06","18006.1","17292.39","-13.7","0.87920","1.00000"]
["ID=gene-e.6","hypothetical protein","42","402.3","412.4","0.04","16897.8","17321.41","10.1","0.90550","1.00000"]
["ID=gene-e.7","hypothetical protein","29","310.1","311.1","0.00","8993.9","9022.40","1.0","0.99160","1.00000"]
["ID=gene-e.8","hypothetical protein","22","300.1","327.7","0.13","6601.5","7210.04","27.7","0.78050","1.00000"]
["ID=gene-frd","Frd dihydrofolate reductase","55","178.4","125.2","-0.51","9809.3","6886.46","-53.1","0.10470","1.00000"]
["ID=gene-frd.1","hypothetical protein","12","170.0","189.1","0.15","2040.0","2269.79","19.2","0.76090","1.00000"]
["ID=gene-frd.2","hypothetical protein","24","508.4","540.6","0.09","12201.8","12975.03","32.2","0.82720","1.00000"]
["ID=gene-frd.3","hypothetical protein","17","4302.8","5675.6","0.40","73148.1","96485.39","1372.8","0.70090","1.00000"]
["ID=gene-goF","goF mRNA metabolism modulator","35","125.1","133.9","0.10","4379.1","4686.85","8.8","0.74420","1.00000"]
["ID=gene-gp47","gp47 recombination endonuclease subunit","75","5.7","8.5","0.51","426.5","640.22","2.8","0.74370","1.00000"]
["ID=gene-hoc","Hoc head outer capsid protein","99","0.3","0.3","-0.02","31.7","29.89","-0.0","0.91940","1.00000"]
["ID=gene-imm","Imm immunity to superinfection membrane protein","20","432.5","523.1","0.27","8649.9","10461.81","90.6","0.56570","1.00000"]
["ID=gene-imm.1","hypothetical protein","31","206.9","288.6","0.48","6412.8","8945.73","81.7","0.13020","1.00000"]
["ID=gene-inh","Inh inhibitor of prohead protease gp21","48","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-ipI","IpI internal head protein","23","441.4","496.8","0.17","10151.2","11425.60","55.4","0.61380","1.00000"]
["ID=gene-ipII","IpII internal head protein","22","158.2","190.0","0.26","3479.5","4179.18","31.8","0.59890","1.00000"]
["ID=gene-ipIII","IpIII internal head protein","45","365.2","415.8","0.19","16432.4","18713.17","50.7","0.78620","1.00000"]
["ID=gene-mobA","homing endonuclease","5","56.7","62.6","0.14","283.5","313.18","5.9","0.81580","1.00000"]
["ID=gene-mobB","MobB homing endonuclease","87","352.5","316.5","-0.15","30667.4","27537.61","-36.0","0.69490","1.00000"]
["ID=gene-mobC","MobC homing endonuclease","64","466.6","491.4","0.07","29861.3","31447.79","24.8","0.77800","1.00000"]
["ID=gene-mobD","MobD homing endonuclease","81","252.5","247.2","-0.03","20449.7","20022.63","-5.3","0.87550","1.00000"]
["ID=gene-mobD.1","hypothetical protein","59","279.4","284.5","0.03","16484.9","16786.88","5.1","0.91500","1.00000"]
["ID=gene-mobD.2","hypothetical protein","14","793.6","811.6","0.03","11110.9","11362.79","18.0","0.93090","1.00000"]
["ID=gene-mobD.2a","hypothetical protein","7","278.9","258.5","-0.11","1952.0","1809.33","-20.4","0.87510","1.00000"]
["ID=gene-mobD.3","hypothetical protein","19","456.9","483.9","0.08","8681.2","9193.50","27.0","0.88360","1.00000"]
["ID=gene-mobD.4","hypothetical protein","19","203.5","209.0","0.04","3866.7","3970.39","5.5","0.92880","1.00000"]
["ID=gene-mobD.5","hypothetical protein","12","466.5","444.0","-0.07","5598.2","5328.37","-22.5","0.89570","1.00000"]
["ID=gene-mobE","MobE homing endonuclease","33","176.9","185.2","0.07","5836.4","6112.39","8.4","0.83150","1.00000"]
["ID=gene-modA","ModA RNA polymerase ADP-ribosylase","62","69.4","18.6","-1.85","4300.8","1150.92","-50.8","0.00000","0.00000"]
["ID=gene-modA.2","hypothetical protein","18","116.7","166.0","0.51","2100.1","2987.97","49.3","0.38100","1.00000"]
["ID=gene-modA.3","hypothetical protein","47","114.7","154.1","0.42","5391.3","7243.39","39.4","0.35960","1.00000"]
["ID=gene-modA.4","hypothetical protein","10","154.1","176.9","0.20","1540.7","1768.61","22.8","0.68720","1.00000"]
["ID=gene-modB","ModB ADP-ribosylase","58","113.1","92.7","-0.28","6560.0","5376.88","-20.4","0.34140","1.00000"]
["ID=gene-motA","MotA activator of middle period transcription","53","2.3","3.1","0.34","119.7","166.34","0.9","1.00000","1.00000"]
["ID=gene-motA.1","hypothetical protein","10","355.9","344.5","-0.05","3558.6","3444.53","-11.4","0.94200","1.00000"]
["ID=gene-motB","MotB modifier of transcription","41","213.9","248.3","0.21","8770.1","10181.55","34.4","0.50240","1.00000"]
["ID=gene-motB.1","hypothetical protein","31","252.8","277.2","0.13","7836.6","8592.27","24.4","0.72380","1.00000"]
["ID=gene-motB.2","hypothetical protein","55","239.5","249.3","0.06","13172.5","13710.11","9.8","0.82740","1.00000"]
["ID=gene-mrh","Mrh transcription modulator under heat shock","56","420.6","477.7","0.18","23552.2","26749.68","57.1","0.68090","1.00000"]
["ID=gene-mrh.1","hypothetical protein","31","529.0","605.0","0.19","16398.1","18756.05","76.1","0.52770","1.00000"]
["ID=gene-mrh.2","hypothetical protein","15","101.8","91.1","-0.16","1527.6","1366.20","-10.8","0.80620","1.00000"]
["ID=gene-ndd","Ndd nucleoid disruption protein","40","162.2","198.7","0.29","6487.2","7947.28","36.5","0.27170","1.00000"]
["ID=gene-ndd.1","hypothetical protein","20","280.8","276.5","-0.02","5615.5","5529.79","-4.3","0.95930","1.00000"]
["ID=gene-ndd.2","hypothetical protein","8","137.8","141.6","0.04","1102.3","1132.73","3.8","0.94950","1.00000"]
["ID=gene-ndd.2a","hypothetical protein","8","274.1","271.1","-0.02","2192.7","2168.86","-3.0","0.97330","1.00000"]
["ID=gene-ndd.3","hypothetical protein","7","116.4","107.5","-0.11","814.6","752.41","-8.9","0.86130","1.00000"]
["ID=gene-ndd.4","hypothetical protein","18","388.2","466.2","0.26","6988.2","8390.84","77.9","0.60350","1.00000"]
["ID=gene-ndd.5","hypothetical protein","9","543.4","515.7","-0.08","4890.3","4640.93","-27.7","0.87880","1.00000"]
["ID=gene-ndd.6","hypothetical protein","11","318.4","302.4","-0.07","3502.8","3326.71","-16.0","0.89870","1.00000"]
["ID=gene-nrdA","NrdA aerobic NDP reductase, large subunit","180","0.1","0.2","0.10","23.7","38.55","0.1","0.49450","1.00000"]
["ID=gene-nrdA.1","hypothetical protein","30","269.3","265.3","-0.02","8078.7","7959.41","-4.0","0.96710","1.00000"]
["ID=gene-nrdA.2","hypothetical protein","29","202.2","179.4","-0.17","5865.2","5204.05","-22.8","0.55700","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.0","0.3","0.36","0.0","14.73","0.3","0.49020","1.00000"]
["ID=gene-nrdB","NrdB aerobic NDP reductase, small subunit","52","0.0","0.3","0.36","0.0","14.73","0.3","0.50280","1.00000"]
["ID=gene-nrdB.1","hypothetical protein","21","293.1","320.0","0.13","6154.2","6719.69","26.9","0.84910","1.00000"]
["ID=gene-nrdC","NrdC thioredoxin","19","40.8","29.8","-0.44","774.8","565.28","-11.0","0.40020","1.00000"]
["ID=gene-nrdC.1","hypothetical protein","28","200.2","213.8","0.09","5605.4","5987.21","13.6","0.82600","1.00000"]
["ID=gene-nrdC.10","hypothetical protein","70","275.3","320.1","0.22","19268.7","22404.60","44.8","0.56280","1.00000"]
["ID=gene-nrdC.11","hypothetical protein","68","257.6","275.2","0.10","17517.3","18714.47","17.6","0.71390","1.00000"]
["ID=gene-nrdC.2","hypothetical protein","20","303.5","301.1","-0.01","6070.4","6022.30","-2.4","0.97400","1.00000"]
["ID=gene-nrdC.3","hypothetical protein","94","167.3","167.1","-0.00","15723.2","15710.04","-0.1","0.99630","1.00000"]
["ID=gene-nrdC.4","hypothetical protein","100","184.6","183.5","-0.01","18456.3","18354.51","-1.0","0.97290","1.00000"]
["ID=gene-nrdC.5","hypothetical protein","81","210.9","225.0","0.09","17081.1","18221.96","14.1","0.72610","1.00000"]
["ID=gene-nrdC.6","hypothetical protein","81","212.3","220.9","0.06","17192.8","17894.49","8.7","0.79460","1.00000"]
["ID=gene-nrdC.7","hypothetical protein","53","474.4","472.1","-0.01","25144.1","25021.79","-2.3","0.98220","1.00000"]
["ID=gene-nrdC.8","hypothetical protein","41","380.7","406.4","0.09","15607.3","16662.57","25.7","0.78460","1.00000"]
["ID=gene-nrdC.9","hypothetical protein","17","156.1","163.2","0.06","2654.4","2774.42","7.1","0.85760","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","309.6","327.1","0.08","12385.0","13082.89","17.4","0.79190","1.00000"]
["ID=gene-nrdD","NrdD anaerobic NTP reductase, large subunit","40","309.6","327.1","0.08","12385.0","13082.89","17.4","0.79490","1.00000"]
["ID=gene-nrdG","NrdG anaerobic NTP reductase, small subunit","36","344.2","356.9","0.05","12392.2","12848.55","12.7","0.86990","1.00000"]
["ID=gene-nrdH","NrdH glutaredoxin","23","3105.4","2831.9","-0.13","71423.4","65134.19","-273.4","0.86380","1.00000"]
["ID=gene-nudE","NudE nudix hydrolase","39","130.4","138.0","0.08","5086.6","5381.64","7.6","0.79140","1.00000"]
["ID=gene-pin","Pin protease inhibitor","39","305.1","254.4","-0.26","11899.7","9920.35","-50.8","0.48720","1.00000"]
["ID=gene-pseT","PseT polynucleotide 5'-kinase and 3'-phosphatase","69","286.5","353.8","0.30","19765.5","24413.19","67.4","0.31910","1.00000"]
["ID=gene-pseT.1","hypothetical protein","16","99.0","132.1","0.41","1583.8","2114.28","33.2","0.42120","1.00000"]
["ID=gene-pseT.2","hypothetical protein","30","0.5","0.8","0.29","15.2","25.12","0.3","1.00000","1.00000"]
["ID=gene-pseT.3","hypothetical protein","28","0.3","1.3","0.86","8.0","37.25","1.0","0.48880","1.00000"]
["ID=gene-rI","rI lysis inhibition regulator, membrane protein","23","68.1","66.9","-0.03","1567.3","1539.47","-1.2","0.96140","1.00000"]
["ID=gene-rI.-1","hypothetical protein","11","358.4","251.4","-0.51","3942.0","2765.76","-106.9","0.16520","1.00000"]
["ID=gene-rI.1","hypothetical protein","16","497.6","269.4","-0.88","7962.3","4309.99","-228.3","0.27840","1.00000"]
["ID=gene-rIIA","RIIA lysis inhibitor","194","446.2","437.9","-0.03","86570.2","84956.26","-8.3","0.88780","1.00000"]
["ID=gene-rIIA.1","hypothetical protein","20","117.3","132.0","0.17","2345.5","2639.28","14.7","0.63520","1.00000"]
["ID=gene-rIIB","rIIB protector from prophage-induced early lysis","68","406.1","409.0","0.01","27612.3","27813.54","3.0","0.96210","1.00000"]
["ID=gene-rIII","rIII lysis inhibition accessory protein, rapid lysis phenotype","11","17.0","16.2","-0.06","186.6","178.46","-0.7","0.93070","1.00000"]
["ID=gene-regA","RegA translational repressor protein","30","14.1","27.5","0.92","421.9","823.88","13.4","0.12240","1.00000"]
["ID=gene-regB","RegB site-specific RNA endonuclease","26","121.3","267.4","1.13","3155.0","6951.44","146.0","0.01120","0.19740"]
["ID=gene-rnh","RNaseH ribonuclease","78","1.8","7.0","1.49","144.3","546.22","5.2","0.00010","0.00353"]
["ID=gene-rnlA","RnlA RNA ligase 1 and tail fiber attachment catalyst","86","4.7","5.3","0.16","400.7","458.29","0.7","0.70330","1.00000"]
["ID=gene-rnlB","RnlB RNA ligase 2","83","283.9","297.0","0.06","23567.0","24650.13","13.0","0.75980","1.00000"]
["ID=gene-rpbA","RpbA RNA polymerase binding protein","28","18.1","34.6","0.90","506.9","969.42","16.5","0.00020","0.00627"]
["ID=gene-segA","SegA homing endonuclease","62","238.3","260.5","0.13","14777.5","16153.60","22.2","0.70480","1.00000"]
["ID=gene-segB","SegB homing endonuclease","65","198.4","231.9","0.22","12892.8","15074.15","33.6","0.37610","1.00000"]
["ID=gene-segC","SegC homing endonuclease","43","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segD","SegD homing endonuclease","65","185.9","185.0","-0.01","12086.7","12025.53","-0.9","0.97690","1.00000"]
["ID=gene-segE","SegE homing endonuclease","61","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-segF","SegF homing endonuclease","60","268.9","294.0","0.13","16134.5","17638.49","25.1","0.59980","1.00000"]
["ID=gene-soc","Soc small outer capsid protein","16","416.9","440.7","0.08","6670.0","7050.63","23.8","0.90000","1.00000"]
["ID=gene-sp","sp spackle periplasmic protein","21","203.5","215.6","0.08","4274.2","4528.31","12.1","0.81210","1.00000"]
["ID=gene-srd","Srd anti-sigma factor, putative","62","185.5","196.8","0.09","11499.8","12204.00","11.4","0.74730","1.00000"]
["ID=gene-srh","Srh transcription modulator","9","514.4","541.7","0.07","4630.0","4875.27","27.2","0.86870","1.00000"]
["ID=gene-stp","Stp activator of host PrrC lysyl-tRNA endonuclease","6","299.0","281.4","-0.09","1793.7","1688.48","-17.5","0.86580","1.00000"]
["ID=gene-t","t holin lysis mediator","64","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","31","25.8","28.6","0.14","798.9","885.39","2.8","0.75960","1.00000"]
["ID=gene-td","dTMP (thymidylate) synthase","31","25.8","28.6","0.14","798.9","885.39","2.8","0.76530","1.00000"]
["ID=gene-tk","Tk thymidine kinase","45","55.7","99.1","0.82","2507.1","4457.70","43.3","0.01000","0.18800"]
["ID=gene-tk.1","hypothetical protein","21","173.8","221.7","0.35","3648.8","4654.79","47.9","0.32500","1.00000"]
["ID=gene-tk.2","hypothetical protein","16","248.0","293.0","0.24","3967.4","4687.71","45.0","0.61870","1.00000"]
["ID=gene-tk.3","hypothetical protein","23","652.8","872.3","0.42","15014.4","20062.48","219.5","0.54660","1.00000"]
["ID=gene-tk.4","hypothetical protein","46","295.3","317.6","0.11","13582.1","14611.53","22.4","0.81140","1.00000"]
["ID=gene-trna.2","trna.2 hypothetical protein","24","137.8","151.3","0.13","3307.3","3632.09","13.5","0.79120","1.00000"]
["ID=gene-trna.3","trna.3 hypothetical protein","40","206.6","223.1","0.11","8265.3","8924.94","16.5","0.70440","1.00000"]
["ID=gene-trna.4","trna.4 hypothetical protein","16","218.5","245.2","0.17","3496.4","3923.61","26.7","0.71040","1.00000"]
["ID=gene-uvsW","UvsW RNA-DNA and DNA-DNA helicase, ATPase","126","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=gene-uvsX","UvsX RecA-like recombination protein","99","5.3","9.1","0.68","528.5","904.45","3.8","0.52060","1.00000"]
["ID=gene-uvsY","UvsY recombination, repair and ssDNA binding protein","39","0.3","0.2","-0.10","12.7","9.10","-0.1","1.00000","1.00000"]
["ID=gene-uvsY.-1","hypothetical protein","20","151.4","163.8","0.11","3028.0","3275.16","12.4","0.81880","1.00000"]
["ID=gene-uvsY.-2","hypothetical protein","10","18.2","23.2","0.34","181.5","232.18","5.1","0.54360","1.00000"]
["ID=gene-vs","Vs valyl-tRNA synthetase modifier","32","9.4","13.9","0.52","299.6","443.99","4.5","0.69010","1.00000"]
["ID=gene-vs.1","hypothetical protein","51","14.3","23.5","0.68","727.8","1198.57","9.2","0.03050","0.47783"]
["ID=gene-vs.3","hypothetical protein","20","667.8","730.7","0.13","13355.3","14614.99","63.0","0.79830","1.00000"]
["ID=gene-vs.4","hypothetical protein","22","275.4","298.9","0.12","6058.6","6576.75","23.6","0.74890","1.00000"]
["ID=gene-vs.5","hypothetical protein","17","237.9","269.4","0.18","4044.8","4579.86","31.5","0.70550","1.00000"]
["ID=gene-vs.6","hypothetical protein","23","179.0","193.9","0.11","4116.8","4459.00","14.9","0.79250","1.00000"]
["ID=gene-vs.7","hypothetical protein","26","137.9","136.5","-0.01","3585.3","3550.22","-1.3","0.97770","1.00000"]
["ID=gene-vs.8","hypothetical protein","59","405.3","443.5","0.13","23909.8","26164.48","38.2","0.66120","1.00000"]
["ID=gene-wac","Wac fibritin neck whiskers","117","0.0","0.0","0.00","0.0","0.00","0.0","1.00000","1.00000"]
["ID=rnaC","rnaC","11","88.0","95.1","0.11","967.7","1045.66","7.1","0.86890","1.00000"]
["ID=rnaD","rnaD","7","76.5","82.8","0.11","535.3","579.58","6.3","0.80610","1.00000"]
["ID=tRNA-Arg","tRNA-Arg","5","47.3","104.8","1.13","236.5","524.13","57.5","0.02180","0.36162"]
["ID=tRNA-Ile","tRNA-Ile","4","141.6","251.2","0.82","566.6","1004.94","109.6","0.48350","1.00000"]
["ID=tRNA-Thr","tRNA-Thr","4","322.9","463.3","0.52","1291.4","1853.08","140.4","0.42820","1.00000"]
["ID=tRNA-Ser","tRNA-Ser","3","59.5","65.6","0.14","178.6","196.66","6.0","0.67150","1.00000"]
["ID=tRNA-Pro","tRNA-Pro","3","185.5","256.9","0.47","556.4","770.60","71.4","0.56700","1.00000"]
["ID=tRNA-Gly","tRNA-Gly","6","218.3","280.5","0.36","1310.1","1683.28","62.2","0.48320","1.00000"]
["ID=tRNA-Leu","tRNA-Leu","2","69.4","76.9","0.15","138.8","153.77","7.5","0.67160","1.00000"]
["ID=tRNA-Gln","tRNA-Gln","5","98.5","127.2","0.37","492.5","635.89","28.7","0.63340","1.00000"]