{"text_format":"3","workbook":"xls","n_sheets":2,"sheets":["SL_RNA_vs_genome","SL miniexon_vs_genome"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"SL_RNA_vs_genome","index":0,"n_rows":532,"n_cols":9,"rows_kept":532,"flags":["formulas_cached_only"]}
["Perkinsela sp. Scaffold","coordinates","BLAST e-evalue","Strand","expression?","note 1","note 2"]
["scaffold688|size13860","2257..2697",0,-1,"yes","Intact"]
["scaffold688|size13860","2698..3059",0,-1,"yes","Probable Intact","no SL-miniexon","5' upstream NNN might be intact SL-RNA repeats?"]
["scaffold102|size45412","10840..11270",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold102|size45412","9923..10059",{"v":8.51742e-15,"d":"8.52E-15"},-1,"yes(multipl_mapped)","Pseudogene","Fragmented","5' upstream overlap with protein coding gene"]
["scaffold102|size45412","31289..31444",{"v":1.03763e-13,"d":"1.04E-13"},1,"yes","Pseudogene","Fragmented"]
["scaffold41|size67153","44530..44960",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold41|size67153","43613..43749",{"v":8.51742e-15,"d":"8.52E-15"},-1,"yes(multipl_mapped)","Pseudogene","Fragmented"]
["scaffold62|size54992","38962..39406",0,-1,"yes","Pseudogene","no SL-miniexon"]
["scaffold62|size54992","40580..40959",{"v":1.43091e-176,"d":"1.43E-176"},-1,"yes(multipl_mapped)(5N endo no transcribed)","Pseudogene","no SL-miniexon","3' overlap with protein coding gene","5 upstream no transcribed"]
["scaffold62|size54992","19469..19830",{"v":4.99438e-176,"d":"4.99E-176"},-1,"yes(multipl_mapped)(5N endo no transcribed)","Pseudogene","no SL-miniexon","5' upstream no transcribed"]
["scaffold62|size54992","6110..6491",{"v":2.12367e-174,"d":"2.12E-174"},1,"yes","Pseudogene","no SL-miniexon","3' overlap with protein coding gene"]
["scaffold62|size54992","37207..37567",{"v":1.2552e-164,"d":"1.26E-164"},1,"yes(multipl_mapped)(5N endo no transcribed)","Pseudogene","no SL-miniexon"]
["scaffold62|size54992","41229..41588",{"v":1.1756e-158,"d":"1.18E-158"},-1,"yes","Pseudogene","no SL-miniexon","overlap with protein coding gene"]
["scaffold62|size54992","14560..14894",{"v":5.72381e-74,"d":"5.72E-74"},1,"yes","Pseudogene","no SL-miniexon"]
["scaffold62|size54992","25665..25877",{"v":6.12214e-42,"d":"6.12E-42"},1,"yes","Pseudogene","Fragmented"]
["scaffold62|size54992","16968..17209",{"v":1.10691e-38,"d":"1.11E-38"},1,"no","Pseudogene","Fragmented"]
["scaffold62|size54992","48800..49005",{"v":3.86349e-38,"d":"3.86E-38"},1,"yes","Pseudogene","Fragmented"]
["scaffold62|size54992","27040..27251",{"v":1.87443e-29,"d":"1.87E-29"},1,"yes","Pseudogene","Fragmented"]
["scaffold62|size54992","29716..29864",{"v":5.37508e-11,"d":"5.38E-11"},-1,"yes","Pseudogene","Fragmented"]
["scaffold39|size68992","24711..25079",0,-1,"yes(multipl_mapped)(5N endo no transcribed)","Pseudogene","no SL-miniexon"]
["scaffold39|size68992","1969..2340",{"v":4.09964e-177,"d":"4.10E-177"},-1,"yes(multipl_mapped)(6N endo no transcribed)","Pseudogene","no SL-miniexon"]
["scaffold39|size68992","47415..47733",{"v":8.50239e-53,"d":"8.50E-53"},-1,"yes","Pseudogene","no SL-miniexon, Fragmented"]
["scaffold39|size68992","53320..53647",{"v":5.36559e-49,"d":"5.37E-49"},1,"no","Pseudogene","no SL-miniexon, Fragmented"]
["scaffold79|size50184","10008..10376",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","5' unique, overlap with protein"]
["scaffold79|size50184","33121..33307",{"v":3.38008e-83,"d":"3.38E-83"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon, Fragmented"]
["scaffold79|size50184","7692..8025",{"v":1.99781e-73,"d":"2.00E-73"},-1,"yes","Pseudogene","no SL-miniexon"]
["scaffold79|size50184","27649..27873",{"v":4.40824e-31,"d":"4.41E-31"},-1,"no","Pseudogene","Fragmented"]
["scaffold79|size50184","9093..9326",{"v":5.37033e-30,"d":"5.37E-30"},1,"yes","Pseudogene","Fragmented"]
["scaffold79|size50184","23987..24124",{"v":1.03763e-13,"d":"1.04E-13"},1,"yes","Pseudogene","Fragmented"]
["scaffold1175|size9698","8734..9111",0,1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold1175|size9698","1690..2062",{"v":9.64143e-179,"d":"9.64E-179"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold1175|size9698","2867..3229",{"v":1.43091e-176,"d":"1.43E-176"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold45|size64190","36359..36728",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold45|size64190","36811..37183",{"v":4.99438e-176,"d":"4.99E-176"},-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold45|size64190","10720..11048",{"v":1.87112e-67,"d":"1.87E-67"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold45|size64190","35523..35705",{"v":6.54241e-29,"d":"6.54E-29"},-1,"no","Pseudogene","Fragmented"]
["scaffold45|size64190","9192..9391",{"v":9.70979e-27,"d":"9.71E-27"},-1,"yes(multipl_mapped)","Pseudogene","Fragmented"]
["scaffold205|size29034","4280..4649",0,-1,"yes(multipl_mapped)","5' truncated","no SL-miniexon"]
["scaffold205|size29034","15768..16139",{"v":2.76231e-179,"d":"2.76E-179"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold205|size29034","28168..28532",{"v":1.74321e-175,"d":"1.74E-175"},-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold205|size29034","28708..29034",{"v":2.59173e-135,"d":"2.59E-135"},-1,"yes(multipl_mapped)","5' truncated"]
["scaffold205|size29034","4915..5248",{"v":1.43725e-81,"d":"1.44E-81"},-1,"yes","Pseudogene","no SL-miniexon"]
["scaffold205|size29034","21937..22103",{"v":2.6055e-21,"d":"2.61E-21"},1,"yes","Pseudogene","Fragmented"]
["scaffold78|size50207","9657..10023",0,1,"yes","Pseudogene","no SL-miniexon","5' unique, overlap with protein"]
["scaffold78|size50207","46533..46899",{"v":1.74475e-156,"d":"1.74E-156"},1,"no","Pseudogene","no SL-miniexon"]
["scaffold78|size50207","23457..23758",{"v":4.39269e-107,"d":"4.39E-107"},-1,"yes","Pseudogene","no SL-miniexon"]
["scaffold78|size50207","10904..11248",{"v":1.34849e-37,"d":"1.35E-37"},1,"yes","Pseudogene","Fragmented","3' overlap with protein coding gene"]
["scaffold78|size50207","16576..16913",{"v":1.34849e-37,"d":"1.35E-37"},1,"yes","Pseudogene","Fragmented","5' unique, overlap with protein"]
["scaffold78|size50207","30073..30239",{"v":2.43813e-34,"d":"2.44E-34"},-1,"yes","Pseudogene","Fragmented","3' overlap with protein coding gene"]
["scaffold78|size50207","4952..5122",{"v":1.03672e-32,"d":"1.04E-32"},1,"yes","Pseudogene","Fragmented"]
["scaffold70|size52491","4385..4757",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","within other protein gene (g2090AC)"]
["scaffold70|size52491","40789..40909",{"v":9.70979e-27,"d":"9.71E-27"},1,"yes","Pseudogene","Fragmented"]
["scaffold3|size330379","47544..47913",0,1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","5' overlap with protein"]
["scaffold3|size330379","115011..115380",0,1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","within other protein gene (g579AC)"]
["scaffold3|size330379","80110..80477",{"v":9.64143e-179,"d":"9.64E-179"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","5' and 3' unique, overlap with protein"]
["scaffold3|size330379","124559..124925",{"v":4.99438e-176,"d":"4.99E-176"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","5' overlap with protein"]
["scaffold3|size330379","147471..147842",{"v":9.03005e-173,"d":"9.03E-173"},-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon","6' overlap with protein"]
["scaffold3|size330379","49309..49644",{"v":1.17976e-82,"d":"1.18E-82"},1,"low","Pseudogene","no SL-miniexon"]
["scaffold3|size330379","29358..29630",{"v":5.37033e-30,"d":"5.37E-30"},1,"yes","Pseudogene","no SL-miniexon"]
["scaffold3|size330379","70202..70327",{"v":1.87443e-29,"d":"1.87E-29"},-1,"yes","Pseudogene","Fragmented"]
["scaffold3|size330379","32822..33058",{"v":7.46488e-22,"d":"7.46E-22"},1,"yes","Pseudogene","Fragmented"]
["scaffold3|size330379","326150..326325",{"v":3.17415e-20,"d":"3.17E-20"},-1,"low","Pseudogene","Fragmented"]
["scaffold3|size330379","35957..36207",{"v":1.34968e-18,"d":"1.35E-18"},-1,"yes","Pseudogene","Fragmented","5' overlap with protein"]
["scaffold3|size330379","310865..310962",{"v":1.34968e-18,"d":"1.35E-18"},-1,"yes","Pseudogene","Fragmented"]
["scaffold3|size330379","96058..96210",{"v":6.99153e-16,"d":"6.99E-16"},1,"yes","Pseudogene","Fragmented"]
["scaffold686|size23159","16770..17140",0,-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold686|size23159","708..1045",{"v":5.33723e-163,"d":"5.34E-163"},-1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold686|size23159","1621..1858",{"v":4.12506e-44,"d":"4.13E-44"},-1,"yes(multipl_mapped)","Pseudogene","Fragmented"]
["scaffold2128|size6173","759..1144",{"v":2.26745e-180,"d":"2.27E-180"},1,"yes(multipl_mapped)","Pseudogene","no SL-miniexon"]
["scaffold2128|size6173","4617..4940",{"v":1.34611e-75,"d":"1.35E-75"},-1,"yes","Pseudogene","no SL-miniexon"]
["scaffold2128|size6173","2387..2720",{"v":1.53591e-68,"d":"1.54E-68"},1,"yes","Pseudogene","no SL-miniexon"]
["scaffold2142|size7551","5..375",{"v":2.26745e-180,"d":"2.27E-180"},1]
["scaffold379|size19685","1489..1859",{"v":2.26745e-180,"d":"2.27E-180"},1]
["scaffold358|size20358","3679..4049",{"v":2.26745e-180,"d":"2.27E-180"},1]
["scaffold358|size20358","17093..17453",{"v":1.17457e-177,"d":"1.17E-177"},-1]
["scaffold360|size23101","8306..8677",{"v":2.26745e-180,"d":"2.27E-180"},1]
["scaffold360|size23101","4084..4458",{"v":1.43091e-176,"d":"1.43E-176"},-1]
["scaffold360|size23101","6002..6396",{"v":3.1518e-172,"d":"3.15E-172"},-1]
["scaffold360|size23101","22022..22396",{"v":1.10009e-171,"d":"1.10E-171"},-1]
["scaffold360|size23101","1214..1464",{"v":1.17768e-120,"d":"1.18E-120"},-1]
["scaffold360|size23101","20805..20908",{"v":1.43979e-43,"d":"1.44E-43"},-1]
["scaffold231|size27159","1078..1463",{"v":2.26745e-180,"d":"2.27E-180"},-1]
["scaffold231|size27159","26243..26614",{"v":2.27949e-66,"d":"2.28E-66"},1]
["scaffold1567|size8010","4487..4850",{"v":7.91416e-180,"d":"7.91E-180"},-1]
["scaffold575|size15252","213..580",{"v":7.91416e-180,"d":"7.91E-180"},-1]
["scaffold575|size15252","8572..8930",{"v":8.45745e-167,"d":"8.46E-167"},-1]
["scaffold575|size15252","7442..7620",{"v":9.70122e-46,"d":"9.70E-46"},-1]
["scaffold4077|size3455","11..376",{"v":2.76231e-179,"d":"2.76E-179"},1]
["scaffold15|size120587","55217..55582",{"v":2.76231e-179,"d":"2.76E-179"},-1]
["scaffold15|size120587","53364..53719",{"v":2.4231e-167,"d":"2.42E-167"},-1]
["scaffold15|size120587","117432..117762",{"v":3.86008e-57,"d":"3.86E-57"},1]
["scaffold15|size120587","4650..4893",{"v":1.03672e-32,"d":"1.04E-32"},1]
["scaffold15|size120587","4287..4469",{"v":5.37033e-30,"d":"5.37E-30"},1]
["scaffold15|size120587","115941..116057",{"v":3.8669e-19,"d":"3.87E-19"},1]
["scaffold2|size470851","154771..155144",{"v":2.76231e-179,"d":"2.76E-179"},1]
["scaffold2|size470851","119717..120083",{"v":2.58715e-173,"d":"2.59E-173"},1]
["scaffold2|size470851","83007..83369",{"v":9.03005e-173,"d":"9.03E-173"},1]
["scaffold2|size470851","279519..279883",{"v":3.1518e-172,"d":"3.15E-172"},-1]
["scaffold2|size470851","416368..416749",{"v":8.45745e-167,"d":"8.46E-167"},1]
["scaffold2|size470851","467243..467595",{"v":4.38107e-164,"d":"4.38E-164"},1]
["scaffold2|size470851","417517..417848",{"v":5.72381e-74,"d":"5.72E-74"},1]
["scaffold2|size470851","312007..312288",{"v":9.69266e-65,"d":"9.69E-65"},-1]
["scaffold2|size470851","85110..85435",{"v":6.53663e-48,"d":"6.54E-48"},1]
["scaffold2|size470851","302750..303013",{"v":6.53663e-48,"d":"6.54E-48"},-1]
["scaffold2|size470851","420655..420885",{"v":1.43979e-43,"d":"1.44E-43"},1]
["scaffold2|size470851","270206..270355",{"v":1.26298e-31,"d":"1.26E-31"},1]
["scaffold2|size470851","305115..305260",{"v":1.18289e-25,"d":"1.18E-25"},-1]
["scaffold2|size470851","272472..272687",{"v":1.34968e-18,"d":"1.35E-18"},-1]
["scaffold2|size470851","316249..316361",{"v":1.34968e-18,"d":"1.35E-18"},1]
["scaffold2|size470851","316495..316653",{"v":4.71085e-18,"d":"4.71E-18"},1]
["scaffold4877|size4794","1761..2130",{"v":9.64143e-179,"d":"9.64E-179"},-1]
["scaffold133|size38602","18864..19243",{"v":9.64143e-179,"d":"9.64E-179"},-1]
["scaffold18|size110339","19737..20110",{"v":9.64143e-179,"d":"9.64E-179"},-1]
["scaffold18|size110339","107656..107982",{"v":3.85667e-76,"d":"3.86E-76"},-1]
["scaffold18|size110339","22912..23246",{"v":2.43382e-72,"d":"2.43E-72"},1]
["scaffold18|size110339","105313..105477",{"v":1.3473e-56,"d":"1.35E-56"},1]
["scaffold18|size110339","93640..93872",{"v":1.10691e-38,"d":"1.11E-38"},1]
["scaffold18|size110339","97209..97471",{"v":3.6185e-32,"d":"3.62E-32"},-1]
["scaffold18|size110339","107002..107129",{"v":9.70979e-27,"d":"9.71E-27"},-1]
["scaffold4|size234899","44330..44689",{"v":9.64143e-179,"d":"9.64E-179"},1]
["scaffold4|size234899","29..399",{"v":2.12367e-174,"d":"2.12E-174"},-1]
["scaffold4|size234899","206954..207331",{"v":3.1518e-172,"d":"3.15E-172"},-1]
["scaffold4|size234899","137657..138013",{"v":2.26945e-161,"d":"2.27E-161"},-1]
["scaffold4|size234899","173146..173384",{"v":4.39657e-88,"d":"4.40E-88"},-1]
["scaffold4|size234899","227084..227396",{"v":1.43852e-62,"d":"1.44E-62"},-1]
["scaffold4|size234899","120291..120613",{"v":1.0358e-51,"d":"1.04E-51"},-1]
["scaffold4|size234899","178137..178422",{"v":5.36559e-49,"d":"5.37E-49"},1]
["scaffold4|size234899","131616..131844",{"v":1.03672e-32,"d":"1.04E-32"},1]
["scaffold4|size234899","136794..137020",{"v":1.03672e-32,"d":"1.04E-32"},-1]
["scaffold4|size234899","180801..181027",{"v":2.7819e-27,"d":"2.78E-27"},-1]
["scaffold4|size234899","166865..167067",{"v":2.13872e-22,"d":"2.14E-22"},-1]
["scaffold4|size234899","132975..133179",{"v":7.46488e-22,"d":"7.46E-22"},-1]
["scaffold149|size51842","2675..3038",{"v":3.36519e-178,"d":"3.37E-178"},-1]
["scaffold149|size51842","25922..26303",{"v":4.99438e-176,"d":"4.99E-176"},-1]
["scaffold149|size51842","35632..35987",{"v":1.74475e-156,"d":"1.74E-156"},-1]
["scaffold149|size51842","36753..36994",{"v":1.74938e-99,"d":"1.75E-99"},-1]
["scaffold149|size51842","31765..32102",{"v":3.60893e-89,"d":"3.61E-89"},1]
["scaffold149|size51842","11718..12047",{"v":1.43852e-62,"d":"1.44E-62"},1]
["scaffold149|size51842","27401..27633",{"v":3.17135e-39,"d":"3.17E-39"},-1]
["scaffold2044|size6325","2358..2726",{"v":1.17457e-177,"d":"1.17E-177"},-1]
["scaffold513|size16441","3477..3852",{"v":1.17457e-177,"d":"1.17E-177"},-1]
["scaffold233|size27112","7142..7510",{"v":1.17457e-177,"d":"1.17E-177"},-1]
["scaffold233|size27112","14292..14603",{"v":6.12214e-42,"d":"6.12E-42"},-1]
["scaffold89|size47518","15188..15557",{"v":1.17457e-177,"d":"1.17E-177"},-1]
["scaffold89|size47518","41129..41357",{"v":3.86008e-57,"d":"3.86E-57"},-1]
["scaffold30|size79243","52233..52604",{"v":1.17457e-177,"d":"1.17E-177"},1]
["scaffold30|size79243","54020..54236",{"v":5.73393e-36,"d":"5.73E-36"},1]
["scaffold727|size13420","6833..7203",{"v":4.09964e-177,"d":"4.10E-177"},1]
["scaffold727|size13420","4808..5173",{"v":4.99438e-176,"d":"4.99E-176"},1]
["scaffold727|size13420","9781..10115",{"v":4.69839e-75,"d":"4.70E-75"},1]
["scaffold604|size14904","3491..3859",{"v":4.09964e-177,"d":"4.10E-177"},-1]
["scaffold429|size18317","12293..12665",{"v":4.09964e-177,"d":"4.10E-177"},1]
["scaffold429|size18317","3003..3365",{"v":1.74321e-175,"d":"1.74E-175"},1]
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["scaffold429|size18317","1805..2036",{"v":2.00134e-35,"d":"2.00E-35"},1]
["scaffold27|size86538","75836..76205",{"v":4.09964e-177,"d":"4.10E-177"},1]
["scaffold27|size86538","7084..7418",{"v":6.53086e-67,"d":"6.53E-67"},-1]
["scaffold27|size86538","34742..35070",{"v":3.61531e-51,"d":"3.62E-51"},1]
["scaffold27|size86538","48940..49265",{"v":4.40435e-50,"d":"4.40E-50"},1]
["scaffold27|size86538","83852..84026",{"v":1.18185e-44,"d":"1.18E-44"},1]
["scaffold27|size86538","77940..78244",{"v":4.70669e-37,"d":"4.71E-37"},-1]
["scaffold27|size86538","69631..69762",{"v":2.6055e-21,"d":"2.61E-21"},-1]
["scaffold27|size86538","64064..64244",{"v":9.09409e-21,"d":"9.09E-21"},1]
["scaffold27|size86538","6692..6949",{"v":2.00311e-16,"d":"2.00E-16"},-1]
["scaffold27|size86538","24576..24755",{"v":1.2641e-12,"d":"1.26E-12"},1]
["scaffold8|size140095","2966..3326",{"v":1.43091e-176,"d":"1.43E-176"},-1]
["scaffold8|size140095","6270..6629",{"v":3.1518e-172,"d":"3.15E-172"},-1]
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["scaffold8|size140095","10574..10753",{"v":1.53863e-30,"d":"1.54E-30"},1]
["scaffold8|size140095","72358..72651",{"v":3.38905e-26,"d":"3.39E-26"},1]
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{"sheet":"SL miniexon_vs_genome","index":1,"n_rows":38,"n_cols":8,"rows_kept":38,"flags":["formulas_cached_only"]}
["BLAST query: first 61 bp of SL RNA gene "]
["Perkinsela sp. Scaffold","coordinates","BLAST e-value","strand","expression","BLAST match region","note"]
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["scaffold105|size44803","43669..43729",{"v":2.21155e-26,"d":"2.21E-26"},-1,"no","1-60","only mini exon"]
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["scaffold1225|size9442","1773..1833",{"v":2.21155e-26,"d":"2.21E-26"},1,"no","1-60","only mini exon"]
["scaffold132|size38618","8034..8094",{"v":2.21155e-26,"d":"2.21E-26"},-1,"no","1-60","only mini exon","overlap with protein gene(g654PC)"]
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["scaffold42|size66400","61969..62029",{"v":2.21155e-26,"d":"2.21E-26"},1,null,"1-60","only mini exon"]
["scaffold45|size64190","10218..10278",{"v":2.21155e-26,"d":"2.21E-26"},1,null,"1-60","only mini exon"]
["scaffold48|size62094","44839..44899",{"v":2.21155e-26,"d":"2.21E-26"},1,null,"1-60","only mini exon"]
["scaffold6268|size2821","1157..1217",{"v":1.02894e-24,"d":"1.03E-24"},-1,null,"1-60","only mini exon"]
["scaffold63|size54760","2709..2769",{"v":2.21155e-26,"d":"2.21E-26"},1,null,"1-60","only mini exon"]
["scaffold64|size54296","10391..10451",{"v":2.21155e-26,"d":"2.21E-26"},-1,null,"1-60","only mini exon"]
["scaffold686|size23159","77..137",{"v":2.21155e-26,"d":"2.21E-26"},1,null,"1-60","only mini exon"]
["scaffold688|size13860","2637..2697",{"v":2.21155e-26,"d":"2.21E-26"},-1,"Yes","1-60","Intact"]
["scaffold79|size50184","27162..27222",{"v":2.21155e-26,"d":"2.21E-26"},-1,null,"1-60","only mini exon"]