{"text_format":"3","workbook":"xls","n_sheets":4,"sheets":["Title page","Table","Sheet2","Sheet3"],"not_rendered":{"external_links":1},"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Title page","index":0,"n_rows":16,"n_cols":2,"rows_kept":16,"flags":["formulas_cached_only"]}
[]
[]
[null,"Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content"]
[]
[]
[null,"Lakshmi Kasirajan1,2,†, Nam V. Hoang1,3,†, Agnelo Furtado1, Frederik C. Botha1,4 and Robert J. Henry1*"]
[]
[]
[null,"1Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, Queensland, Australia, 4072"]
[null,"2ICAR-Sugarcane Breeding Institute, Coimbatore 641007, Tamil Nadu, India."]
[null,"3College of Agriculture and Forestry, Hue University, Hue, Vietnam. "]
[null,"4Sugar Research Australia, Indooroopilly, Queensland, Australia. 4068. "]
[]
[]
[null,"*Corresponding author: Robert J. Henry, Level 2, The John Hay Building, Queensland Biosciences Precinct [#80], 306 Carmody Road, The University of Queensland, St Lucia QLD 4072."]
[null,"Email: robert.henry@uq.edu.au, Tel: +61 7 3346 0551, Fax: +61 7 334 60555"]

{"sheet":"Table","index":1,"n_rows":512,"n_cols":108,"rows_kept":512,"merged":[[3,1,3,5],[3,6,3,55],[3,57,3,106]],"flags":["formulas_cached_only"]}
[]
["EDGE test of DE transcripts in High fiber T-B"]
[]
[null,"Empirical Differential Gene Experssion statistical analysis",{"$nulls":4},"Top internodes of High fiber",{"$nulls":50},"Bottom internodes of high fiber"]
["SoGI Feature ID","EDGE test: TOP HIGH FIBER vs BOTTOM HIGH FIBER, tagwise dispersions - P-value","EDGE test: TOP HIGH FIBER vs BOTTOM HIGH FIBER, tagwise dispersions - Fold change","EDGE test: TOP HIGH FIBER vs BOTTOM HIGH FIBER, tagwise dispersions - Weighted difference","EDGE test: TOP HIGH FIBER vs BOTTOM HIGH FIBER, tagwise dispersions - Bonferroni","EDGE test: TOP HIGH FIBER vs BOTTOM HIGH FIBER, tagwise dispersions - FDR p-value correction","T2_RNA-Seq - Expression values","T2_ RNA-Seq - Gene length","T2_RNA-Seq - Unique gene reads"," T2_RNA-Seq - Total gene reads","T2_RNA-Seq - RPKM"," T3_RNA-Seq - Expression values","T3_ RNA-Seq - Gene length","T3_ RNA-Seq - Unique gene reads"," T3_RNA-Seq - Total gene reads","T3_RNA-Seq - RPKM"," T7_RNA-Seq - Expression values"," T7_RNA-Seq - Gene length"," T7_RNA-Seq - Unique gene reads"," T7_RNA-Seq - Total gene reads"," T7_RNA-Seq - RPKM","T9_RNA-Seq - Expression values"," T9_RNA-Seq - Gene length"," T9_RNA-Seq - Unique gene reads"," T9_RNA-Seq - Total gene reads","T9_RNA-Seq - RPKM"," T14_RNA-Seq - Expression values"," T14_RNA-Seq - Gene length"," T14_RNA-Seq - Unique gene reads"," T14_RNA-Seq - Total gene reads","T14_RNA-Seq - RPKM"," T15_RNA-Seq - Expression values"," T15_RNA-Seq - Gene length"," T15_RNA-Seq- Unique gene reads"," T15_RNA-Seq - Total gene reads"," T15_RNA-Seq - RPKM","T16_RNA-Seq - Expression values"," T16_RNA-Seq - Gene length"," T16_RNA-Seq - Unique gene reads"," T16_RNA-Seq - Total gene reads"," T16_RNA-Seq - RPKM"," T17_RNA-Seq - Expression values"," T17_RNA-Seq - Gene length"," T17_RNA-Seq - Unique gene reads","T17_RNA-Seq - Total gene reads","T17_RNA-Seq - RPKM"," T20_RNA-Seq - Expression values"," T20_ RNA-Seq - Gene length","T20_RNA-Seq - Unique gene reads","T20_RNA-Seq - Total gene reads","T20_RNA-Seq - RPKM","T5_RNA-Seq - Expression values"," T5_RNA-Seq - Gene length"," T5_RNA-Seq - Unique gene reads"," T5_S99_RNA-Seq - Total gene reads"," T5_RNA-Seq - RPKM","TOP HIGH FIBER - Means"," B5_RNA-Seq - Expression values","B5_ RNA-Seq - Gene length","B5_RNA-Seq - Unique gene reads","B5_ RNA-Seq - Total gene reads","B5_ RNA-Seq - RPKM","B20_RNA-Seq - Expression values","B20_RNA-Seq - Gene length","B20_ RNA-Seq - Unique gene reads","B20_RNA-Seq - Total gene reads","B20_RNA-Seq - RPKM","B17_RNA-Seq - Expression values","B17_RNA-Seq - Gene length","B17_RNA-Seq - Unique gene reads","B17_RNA-Seq - Total gene reads","B17_RNA-Seq - RPKM","B16_RNA-Seq - Expression values","B16_RNA-Seq - Gene length"," B16_RNA-Seq - Unique gene reads","B16_ RNA-Seq - Total gene reads","B16_RNA-Seq - RPKM","B15_ RNA-Seq - Expression values","B15_ RNA-Seq - Gene length","B15_ RNA-Seq - Unique gene reads","B15_ RNA-Seq - Total gene reads","B15_RNA-Seq - RPKM","B14_ RNA-Seq - Expression values","B14_RNA-Seq - Gene length"," B14_ RNA-Seq - Unique gene reads","B14_RNA-Seq - Total gene reads","B14_RNA-Seq - RPKM","B9_RNA-Seq - Expression values","B9_ RNA-Seq - Gene length","B9_RNA-Seq - Unique gene reads","B9_RNA-Seq - Total gene reads","B9_ RNA-Seq - RPKM","B7_RNA-Seq - Expression values","B7_RNA-Seq - Gene length","B7_RNA-Seq - Unique gene reads","B7_RNA-Seq - Total gene reads","B7_RNA-Seq - RPKM","B3_RNA-Seq- Expression values","B3_RNA-Seq - Gene length","B3_RNA-Seq - Unique gene reads","B3_RNA-Seq - Total gene reads","B3_RNA-Seq - RPKM","B2_RNA-Seq - Expression values","B2_RNA-Seq - Gene length","B2_ RNA-Seq - Unique gene reads","B2_ RNA-Seq - Total gene reads","B2_RNA-Seq - RPKM","BOTTOM HIGH FIBER - Means"]
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["BQ532966 UniRef100_A4QMC4 Cluster: ORF107c; n=1; Pinus koraiensis",1.491699697972802e-05,{"v":27.84650087603188,"d":"27.8"},2.302610888017398e-05,1,0.007448799372486244,{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":3.64738526946223,"d":"3.6"},{"v":279,"d":"279.0"},{"v":13,"d":"13.0"},{"v":13,"d":"13.0"},{"v":3.64738526946223,"d":"3.6"},{"v":0.38528596253366104,"d":"0.4"},{"v":279,"d":"279.0"},{"v":2,"d":"2.0"},{"v":2,"d":"2.0"},{"v":0.38528596253366104,"d":"0.4"},{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":3.467577718285046,"d":"3.5"},{"v":279,"d":"279.0"},{"v":25,"d":"25.0"},{"v":25,"d":"25.0"},{"v":3.467577718285046,"d":"3.5"},{"v":2.9444872672269544,"d":"2.9"},{"v":279,"d":"279.0"},{"v":12,"d":"12.0"},{"v":12,"d":"12.0"},{"v":2.9444872672269544,"d":"2.9"},{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":279,"d":"279.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":0,"d":"0.0"},{"v":1.044473621750789,"d":"1.0"},{"v":0.15354874495133722,"d":"0.2"},{"v":279,"d":"279.0"},{"v":1,"d":"1.0"},{"v":1,"d":"1.0"},{"v":0.15354874495133722,"d":"0.2"},{"v":8.291462961840972,"d":"8.3"},{"v":279,"d":"279.0"},{"v":57,"d":"57.0"},{"v":57,"d":"57.0"},{"v":8.291462961840972,"d":"8.3"},{"v":10.109580100676768,"d":"10.1"},{"v":279,"d":"279.0"},{"v":77,"d":"77.0"},{"v":77,"d":"77.0"},{"v":10.109580100676768,"d":"10.1"},{"v":6.935551405899557,"d":"6.9"},{"v":279,"d":"279.0"},{"v":48,"d":"48.0"},{"v":48,"d":"48.0"},{"v":6.935551405899557,"d":"6.9"},{"v":1.5458677528131368,"d":"1.5"},{"v":279,"d":"279.0"},{"v":3,"d":"3.0"},{"v":3,"d":"3.0"},{"v":1.5458677528131368,"d":"1.5"},{"v":0.7462640549403836,"d":"0.7"},{"v":279,"d":"279.0"},{"v":2,"d":"2.0"},{"v":2,"d":"2.0"},{"v":0.7462640549403836,"d":"0.7"},{"v":9.299720810049852,"d":"9.3"},{"v":279,"d":"279.0"},{"v":50,"d":"50.0"},{"v":50,"d":"50.0"},{"v":9.299720810049852,"d":"9.3"},{"v":0.30659650903371083,"d":"0.3"},{"v":279,"d":"279.0"},{"v":1,"d":"1.0"},{"v":1,"d":"1.0"},{"v":0.30659650903371083,"d":"0.3"},{"v":12.642603038892416,"d":"12.6"},{"v":279,"d":"279.0"},{"v":265,"d":"265.0"},{"v":265,"d":"265.0"},{"v":12.642603038892416,"d":"12.6"},{"v":10.354541279570878,"d":"10.4"},{"v":279,"d":"279.0"},{"v":124,"d":"124.0"},{"v":124,"d":"124.0"},{"v":10.354541279570878,"d":"10.4"},{"v":6.038573665866902,"d":"6.0"}]
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