Detailed summary for zero-inflated mixed models with negative binomial distribution fitted with glmmTBM function from glmmTBM package. Each model included population as a random factor. -------------------------------------------------------- *** G_322391_149 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.082488 0.3986177 10.24161 1.290682e-24 G_322391_149C/T 0.630234 0.3967628 1.58844 1.121868e-01 G_322391_149T/T -10.583848 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.04552976 0.5116110 -2.0436031 0.04099277 G_322391_149C/T -0.08736603 0.8290997 -0.1053746 0.91607859 G_322391_149T/T 8.14703664 NaN NaN NaN -------------------------------------------------------- *** G_385130_246 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3332268 0.4490042 9.6507488 4.879808e-22 G_385130_246T/C 0.1573074 0.4307698 0.3651775 7.149789e-01 G_385130_246T/T -0.4237739 0.4203205 -1.0082161 3.133507e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.44671008 0.4772530 -0.936002664 0.3492718 G_385130_246T/C -0.01400115 0.5936099 -0.023586451 0.9811825 G_385130_246T/T -17.57777135 4071.7682633 -0.004316987 0.9965556 -------------------------------------------------------- *** G_385130_247 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.05523379 1.108778 3.6573909 0.0002547957 G_385130_247G/C 0.39213289 1.105984 0.3545555 0.7229226141 G_385130_247G/G 0.01356424 1.093758 0.0124015 0.9901052844 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1102509 2.296848 -0.4833802 0.6288258 G_385130_247G/C 0.6057137 2.336503 0.2592394 0.7954505 G_385130_247G/G -0.6709212 2.548515 -0.2632597 0.7923505 -------------------------------------------------------- *** G_621907_107 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0489648 0.7127529 5.6807414 1.341121e-08 G_621907_107G/G 0.1599944 0.6438004 0.2485154 8.037356e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.96484871 1.195746 -0.80690133 0.4197233 G_621907_107G/G -0.01704239 1.236976 -0.01377747 0.9890075 -------------------------------------------------------- *** G_433236_258 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4704689 0.4564806 9.793338 1.202583e-22 G_433236_258A/T -0.4822811 0.4304375 -1.120444 2.625246e-01 G_433236_258T/T -0.3326969 0.5458736 -0.609476 5.422090e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.5150809 0.3972409 -1.2966462 0.1947529 G_433236_258A/T -0.8215566 0.9796064 -0.8386599 0.4016602 G_433236_258T/T -1.0082304 1.4127125 -0.7136841 0.4754226 -------------------------------------------------------- *** G_209960_237 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.7468709 0.4584613 10.353919 4.016998e-25 G_209960_237T/T -0.7725251 0.3625439 -2.130846 3.310186e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.2077811 0.3794851 -0.5475343 0.5840117 G_209960_237T/T -1.2185433 0.8256215 -1.4759104 0.1399680 -------------------------------------------------------- *** G_393751_426 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2422381 0.384497 11.0332142 2.642488e-28 G_393751_426C/T -0.4441757 0.822936 -0.5397452 5.893728e-01 G_393751_426T/T -11.1021527 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9147305 0.3916964 -2.335305 0.0195275 G_393751_426C/T -1.3266080 4.9723861 -0.266795 0.7896270 G_393751_426T/T 5.8697676 NaN NaN NaN -------------------------------------------------------- *** G_393751_492 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3279218 0.3978616 10.8779580 1.468150e-27 G_393751_492C/T -0.6536873 0.5585379 -1.1703544 2.418584e-01 G_393751_492T/T 0.4720685 0.5745766 0.8215935 4.113083e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.6480005 0.3455885 -1.8750639 0.06078394 G_393751_492C/T -2.0520580 5.0442683 -0.4068098 0.68414766 G_393751_492T/T -0.9236359 1.3812341 -0.6687034 0.50368470 -------------------------------------------------------- *** G_344793_1115 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1756871 0.3855932 10.8292561 2.501794e-27 G_344793_1115C/T 0.3073898 0.5027964 0.6113603 5.409611e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.155221 0.5071735 -2.277763 0.02274072 G_344793_1115C/T 1.061355 0.7434267 1.427652 0.15339197 -------------------------------------------------------- *** G_41358_42 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.7425270 0.4870090 7.6847191 1.533331e-14 G_41358_42T/C 0.3027658 0.3630640 0.8339186 4.043269e-01 G_41358_42T/T 0.7033533 0.3406593 2.0646825 3.895305e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -17.21356 3593.871 -0.004789700 0.9961784 G_41358_42T/C 16.47302 3593.871 0.004583642 0.9963428 G_41358_42T/T 16.57935 3593.871 0.004613230 0.9963192 -------------------------------------------------------- *** G_303102_402 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.7606711 0.8553700 5.5656276 2.612105e-08 G_303102_402T/C -1.1211460 0.8989098 -1.2472286 2.123137e-01 G_303102_402T/T -0.4172302 0.7775848 -0.5365719 5.915633e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.06996843 1.051095 -0.06656718 0.9469263 G_303102_402T/C -2.14194179 3.304711 -0.64814804 0.5168892 G_303102_402T/T -0.71548650 1.110778 -0.64413117 0.5194904 -------------------------------------------------------- *** G_309599_211 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.701553 0.5186111 10.993889 4.089195e-28 G_309599_211T/C -1.507674 0.5498715 -2.741866 6.109128e-03 G_309599_211T/T -1.728843 0.6735574 -2.566734 1.026612e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) 0.6860959 0.5016126 1.367780 0.1713808 G_309599_211T/C -2.3824743 1.5060620 -1.581923 0.1136671 G_309599_211T/T -2.4872242 2.4125630 -1.030947 0.3025658 -------------------------------------------------------- *** G_155465_171 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2098636 0.4228500 9.9559259 2.376008e-23 G_155465_171G/A 0.1482951 0.3891078 0.3811158 7.031174e-01 G_155465_171G/G -0.2163238 0.7258062 -0.2980463 7.656679e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.928043 1.211429 -1.5915437 0.1114873 G_155465_171G/A 1.145842 1.233774 0.9287290 0.3530295 G_155465_171G/G 1.338736 1.603576 0.8348441 0.4038055 -------------------------------------------------------- *** G_265198_105 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2304185 0.4162577 10.1629800 2.900723e-24 G_265198_105C/T -0.5083011 0.4694738 -1.0827037 2.789400e-01 G_265198_105T/T 0.2641409 0.8115662 0.3254705 7.448250e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9823673 3.843382e-01 -2.555997203 0.0105884 G_265198_105C/T -15.5372858 4.129878e+03 -0.003762166 0.9969982 G_265198_105T/T -23.1974155 1.259094e+05 -0.000184239 0.9998530 -------------------------------------------------------- *** G_329123_744 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1106414 0.3835929 10.7161569 8.548181e-27 G_329123_744C/T 0.1497839 0.4928043 0.3039419 7.611721e-01 G_329123_744T/T 1.3461692 0.6159889 2.1853789 2.886108e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1667448 0.6033058 -1.9339192 0.05312306 G_329123_744C/T 0.2833824 0.9094007 0.3116145 0.75533354 G_329123_744T/T 1.1616098 1.1693679 0.9933655 0.32053185 -------------------------------------------------------- *** G_428810_55 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.14245012 0.4102087 10.0983964 5.615289e-24 G_428810_55A/T 0.04819325 0.4492228 0.1072814 9.145658e-01 G_428810_55T/T 0.39869487 0.7829447 0.5092248 6.105947e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.3402634 0.6506237 -2.0599670 0.0394017 G_428810_55A/T 0.8935091 0.7909018 1.1297346 0.2585881 G_428810_55T/T 0.7234935 1.2865388 0.5623565 0.5738731 -------------------------------------------------------- *** G_222230_1003 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.15937838 0.4862654 8.5537200 1.191838e-17 G_222230_1003C/T -0.06307291 0.4239866 -0.1487615 8.817418e-01 G_222230_1003T/T -0.43255010 0.4349725 -0.9944309 3.200131e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8860195 0.4622659 -1.916687938 0.05527759 G_222230_1003C/T -0.1069301 0.7258263 -0.147321858 0.88287798 G_222230_1003T/T -16.6938951 3852.0387092 -0.004333782 0.99654215 -------------------------------------------------------- *** G_369888_60 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.8133694 1.251127 3.0479484 0.002304095 G_369888_60G/A 0.8552066 1.219334 0.7013721 0.483070840 G_369888_60G/G 0.1674840 1.203434 0.1391718 0.889314382 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -2.394734 7.733540 -0.3096555 0.7568229 G_369888_60G/A 1.654692 7.743303 0.2136933 0.8307862 G_369888_60G/G 1.356706 7.726271 0.1755965 0.8606110 -------------------------------------------------------- *** G_369888_93 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.419614 0.4753116 9.2983507 1.426410e-20 G_369888_93T/T -0.312789 0.3952049 -0.7914605 4.286753e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7093044 0.5083302 -1.3953615 0.1629069 G_369888_93T/T -0.4880096 0.7437137 -0.6561794 0.5117087 -------------------------------------------------------- *** G_369888_307 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9402938 0.4632836 8.5051440 1.813704e-17 G_369888_307A/G 0.6116157 0.3659562 1.6712812 9.466615e-02 G_369888_307G/G -0.4004932 0.4908413 -0.8159322 4.145389e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.3983941 0.8344607 -1.675805893 0.09377622 G_369888_307A/G 0.9783524 0.8805058 1.111125471 0.26651435 G_369888_307G/G -14.4053378 4022.0165564 -0.003581621 0.99714229 -------------------------------------------------------- *** G_252388_426 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2696352 0.4138711 10.3163405 5.944588e-25 G_252388_426C/T -0.2893519 0.4586064 -0.6309373 5.280815e-01 G_252388_426T/T -1.6797373 1.0376123 -1.6188487 1.054798e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8071864 0.3846079 -2.098725215 0.03584113 G_252388_426C/T -0.6792069 1.1874815 -0.571972641 0.56734051 G_252388_426T/T -13.2226207 4331.9598954 -0.003052341 0.99756459 -------------------------------------------------------- *** G_271438_626 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0406555 0.4088697 9.8825010 4.957979e-23 G_271438_626A/G 0.4808095 0.3831353 1.2549339 2.095027e-01 G_271438_626G/G 0.2168867 0.9638872 0.2250126 8.219695e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1739440 0.6729718 -1.7444179 0.08108625 G_271438_626A/G 0.4249157 0.7792272 0.5453040 0.58554448 G_271438_626G/G 0.3059817 1.7052303 0.1794372 0.85759445 -------------------------------------------------------- *** G_271438_627 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.527321 0.5365950 8.4371279 3.252305e-17 G_271438_627T/C -0.196904 0.4763021 -0.4134016 6.793124e-01 G_271438_627T/T -0.595763 0.5143858 -1.1582027 2.467813e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.3624809 0.5876953 -0.6167837 0.5373774 G_271438_627T/C -0.2046403 0.7045295 -0.2904638 0.7714614 G_271438_627T/T -1.4658837 1.4406942 -1.0174843 0.3089231 -------------------------------------------------------- *** G_433232_225 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.19722794 0.3580019 11.72403794 9.598532e-32 G_433232_225C/T 0.98267512 0.5519920 1.78023421 7.503764e-02 G_433232_225T/T 0.06201179 0.9849382 0.06296008 9.497983e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.068591 0.4642106 -2.301952956 0.02133783 G_433232_225C/T 1.882124 0.7807894 2.410540220 0.01592891 G_433232_225T/T -15.960576 4986.9679383 -0.003200457 0.99744641 -------------------------------------------------------- *** G_372070_273 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.307571 1.371953 3.868624 0.0001094511 G_372070_273G/A -1.454626 1.378621 -1.055131 0.2913652417 G_372070_273G/G -1.138844 1.380318 -0.825059 0.4093381222 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.2253221 1.736066 -0.129788933 0.8967334 G_372070_273G/A -15.5741680 3522.639752 -0.004421164 0.9964724 G_372070_273G/G -0.7850173 1.788068 -0.439030945 0.6606391 -------------------------------------------------------- *** G_221652_115 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9470607 1.087659 3.6289515 0.0002845746 G_221652_115G/A 0.3581128 1.106567 0.3236251 0.7462219011 G_221652_115G/G 0.1516704 1.056690 0.1435336 0.8858688021 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -14.76339 4046.797 -0.003648166 0.9970892 G_221652_115G/A 12.16026 4046.800 0.003004908 0.9976024 G_221652_115G/G 13.88810 4046.797 0.003431873 0.9972618 -------------------------------------------------------- *** G_266965_261 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.17997672 0.4164214 10.0378526 1.039116e-23 G_266965_261C/T 0.02014638 0.6869028 0.0293293 9.766020e-01 G_266965_261T/T -11.07139153 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9132666 0.4050011 -2.2549730 0.02413502 G_266965_261C/T -1.1500414 2.7671453 -0.4156057 0.67769855 G_266965_261T/T 5.9699176 NaN NaN NaN -------------------------------------------------------- *** G_410766_552 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3934615 0.4122341 10.6576857 1.605426e-26 G_410766_552C/T -0.6635139 0.4813424 -1.3784657 1.680596e-01 G_410766_552T/T -0.2406240 0.7199223 -0.3342361 7.382014e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0338052 0.4326619 -2.3894067 0.01687561 G_410766_552C/T -0.2371344 1.2486006 -0.1899202 0.84937169 G_410766_552T/T 0.2778490 1.3533973 0.2052974 0.83733974 -------------------------------------------------------- *** G_410766_569 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9090297 0.4223471 9.2554908 2.132484e-20 G_410766_569C/T 0.9469261 0.3553707 2.6646151 7.707647e-03 G_410766_569T/T 0.4112558 1.0322178 0.3984196 6.903209e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.3163595 0.7378832 -1.7839673 0.07442898 G_410766_569C/T 0.7883026 0.8332048 0.9461090 0.34409300 G_410766_569T/T 1.0751402 1.4624980 0.7351396 0.46225445 -------------------------------------------------------- *** G_410766_570 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.18394663 0.4456811 9.3877586 6.129060e-21 G_410766_570A/G -0.02809144 0.4288141 -0.0655096 9.477683e-01 G_410766_570G/G 0.36612047 0.6788218 0.5393469 5.896475e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7042680 0.4474808 -1.5738507 0.1155220 G_410766_570A/G -0.9731834 1.1377673 -0.8553448 0.3923603 G_410766_570G/G 0.1544751 1.0013285 0.1542702 0.8773967 -------------------------------------------------------- *** G_410766_624 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2966144 0.3900761 11.014810 3.242211e-28 G_410766_624C/T -0.2976834 0.4856554 -0.612952 5.399081e-01 G_410766_624T/T -9.1517727 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7897818 0.4041148 -1.9543498 0.05065986 G_410766_624C/T -1.3658488 2.3667105 -0.5771085 0.56386613 G_410766_624T/T 9.2866591 NaN NaN NaN -------------------------------------------------------- *** G_461687_643 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.25234382 0.3936190 10.8031975 3.324214e-27 G_461687_643A/G -0.08386062 0.4198329 -0.1997476 8.416780e-01 G_461687_643G/G 0.17955947 0.6284093 0.2857365 7.750800e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7265681 0.4775125 -1.5215688 0.1281171 G_461687_643A/G -0.5823155 0.9102468 -0.6397336 0.5223458 G_461687_643G/G -1.2776374 2.0027349 -0.6379463 0.5235086 -------------------------------------------------------- *** G_461687_699 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0127847 0.4230755 9.4847963 2.428569e-21 G_461687_699G/T 0.6608923 0.3528191 1.8731758 6.104411e-02 G_461687_699T/T -0.1435547 0.5638730 -0.2545869 7.990422e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9892484 0.5282560 -1.872668678 0.06111415 G_461687_699G/T 0.1008891 0.6818126 0.147971883 0.88236496 G_461687_699T/T -15.2361545 3840.5687079 -0.003967161 0.99683467 -------------------------------------------------------- *** G_589289_144 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9940194 0.4301267 9.2856822 1.606746e-20 G_589289_144A/G 0.5864393 0.3646654 1.6081575 1.078007e-01 G_589289_144G/G 0.1466717 1.0062007 0.1457679 8.841046e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.01759271 0.5749790 -1.76979111 0.07676195 G_589289_144A/G 0.06539758 0.7285929 0.08975874 0.92847894 G_589289_144G/G -1.11112081 4.1118265 -0.27022561 0.78698669 -------------------------------------------------------- *** G_234776_254 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9935633 0.5727680 6.9723921 3.115967e-12 G_234776_254T/T 0.2075084 0.4609515 0.4501739 6.525850e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -2.024249 1.913691 -1.0577724 0.2901592 G_234776_254T/T 1.130874 1.909701 0.5921731 0.5537347 -------------------------------------------------------- *** G_234776_486 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4733014 0.4270097 10.4758777 1.114985e-25 G_234776_486C/T -0.8643909 0.7070861 -1.2224691 2.215303e-01 G_234776_486T/T -0.3288387 0.7078717 -0.4645456 6.422569e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.5576671 0.2981511 -1.87041772 0.06142583 G_234776_486C/T -5.4721291 178.7157413 -0.03061918 0.97557325 G_234776_486T/T -2.9691140 11.3426582 -0.26176527 0.79350241 -------------------------------------------------------- *** G_362654_2058 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0769047 0.3581062 11.38463 4.988171e-30 G_362654_2058C/T 0.6181693 0.4412343 1.40100 1.612140e-01 G_362654_2058T/T -12.5886719 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.3785747 0.9355263 -1.4735820 0.1405942 G_362654_2058C/T 0.7337529 1.0098523 0.7265942 0.4674746 G_362654_2058T/T 6.0304035 NaN NaN NaN -------------------------------------------------------- *** G_153958_145 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.18623884 0.6851362 6.1100825 9.957966e-10 G_153958_145G/G 0.07902781 0.6618479 0.1194048 9.049547e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0953136 1.397344 -0.7838539 0.4331258 G_153958_145G/G 0.1437085 1.415939 0.1014934 0.9191588 -------------------------------------------------------- *** G_153958_384 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.27036989 0.5248440 8.13645589 4.070170e-16 G_153958_384A/G -0.08493592 0.4420855 -0.19212554 8.476439e-01 G_153958_384G/G 0.03527339 0.5390851 0.06543195 9.478301e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.6527336 0.9711057 -1.7019091 0.08877242 G_153958_384A/G 0.9888517 1.0519573 0.9400113 0.34721176 G_153958_384G/G 0.1727021 1.3436878 0.1285284 0.89773080 -------------------------------------------------------- *** G_223488_1410 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.3047947 1.049408 5.0550339 4.303144e-07 G_223488_1410T/C -0.9775058 1.044833 -0.9355621 3.494987e-01 G_223488_1410T/T -1.2181936 1.043306 -1.1676285 2.429566e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) 0.6871606 1.227653 0.5597352 0.5756600 G_223488_1410T/C -1.4586493 1.333835 -1.0935756 0.2741412 G_223488_1410T/T -1.8280808 1.344192 -1.3599845 0.1738348 -------------------------------------------------------- *** G_72382_149 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4311332 0.4566027 9.7045705 2.882879e-22 G_72382_149C/T -0.3053036 0.3508754 -0.8701199 3.842349e-01 G_72382_149T/T -1.2258221 0.9716365 -1.2616057 2.070907e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.835637 0.4092097 -2.0420752 0.04114408 G_72382_149C/T -0.507078 0.7636351 -0.6640318 0.50666995 G_72382_149T/T -2.490249 19.1646052 -0.1299400 0.89661387 -------------------------------------------------------- *** G_373125_426 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4060441 0.6990708 6.3027156 2.924754e-10 G_373125_426T/C -0.1835316 0.7077762 -0.2593073 7.953981e-01 G_373125_426T/T -0.2763496 0.7151248 -0.3864355 6.991742e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.6632606 1.066088 -0.6221445 0.5338469 G_373125_426T/C -0.1441541 1.166090 -0.1236218 0.9016148 G_373125_426T/T -0.4562704 1.179177 -0.3869397 0.6988009 -------------------------------------------------------- *** G_373125_792 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4086967 0.3339588 13.201319 8.621207e-40 G_373125_792C/T -0.8524389 0.3845370 -2.216793 2.663725e-02 G_373125_792T/T -0.9864828 0.6953633 -1.418658 1.559987e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9299867 3.956236e-01 -2.3506853184 0.01873887 G_373125_792C/T -14.6157580 3.623617e+03 -0.0040334726 0.99678176 G_373125_792T/T -20.0964548 9.391140e+04 -0.0002139938 0.99982926 -------------------------------------------------------- *** G_438995_351 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1354749 0.381881 10.829224 2.502683e-27 G_438995_351A/C 0.6466311 0.413771 1.562775 1.181055e-01 G_438995_351C/C -10.8912987 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0839665 0.5263848 -2.0592662 0.03946874 G_438995_351A/C -0.2481641 0.9229800 -0.2688726 0.78802772 G_438995_351C/C 8.4911896 NaN NaN NaN -------------------------------------------------------- *** G_281950_1015 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.40748855 0.9885339 4.4586112 8.249238e-06 G_281950_1015G/A 0.09137819 0.9698026 0.0942235 9.249316e-01 G_281950_1015G/G -0.28712621 0.9530862 -0.3012594 7.632167e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) 0.7303103 0.9023480 0.8093444 0.41831708 G_281950_1015G/A -1.1509000 0.9881779 -1.1646688 0.24415306 G_281950_1015G/G -2.0870630 1.0872273 -1.9196197 0.05490595 -------------------------------------------------------- *** G_281950_1710 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.31286785 0.4416514 9.765322 1.586070e-22 G_281950_1710A/G 0.09462852 0.3754802 0.252020 8.010256e-01 G_281950_1710G/G -0.69503561 0.3772046 -1.842596 6.538803e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.3281657 0.4035652 -0.813166363 0.4161227 G_281950_1710A/G -0.6967974 0.6035225 -1.154550886 0.2482744 G_281950_1710G/G -16.4681531 4508.4485585 -0.003652732 0.9970855 -------------------------------------------------------- *** G_526800_134 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.0834813 0.7363008 4.1878011 2.816702e-05 G_526800_134G/C 0.5025624 0.7460413 0.6736388 5.005410e-01 G_526800_134G/G 1.5268751 0.7527291 2.0284522 4.251412e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -14.757628 3806.364 -0.0038770933 0.9969065 G_526800_134G/C -6.311875 46591.309 -0.0001354732 0.9998919 G_526800_134G/G 13.732934 3806.364 0.0036078878 0.9971213 -------------------------------------------------------- *** G_262882_163 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.5734192 0.6103438 5.854765 4.776856e-09 G_262882_163G/A 0.7323876 0.5524499 1.325709 1.849362e-01 G_262882_163G/G 1.0491353 0.6194410 1.693681 9.032595e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -2.370873 3.850966 -0.6156566 0.5381212 G_262882_163G/A 1.484687 3.831241 0.3875212 0.6983704 G_262882_163G/G 2.112262 3.860493 0.5471483 0.5842768 -------------------------------------------------------- *** G_262882_252 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 2.4397 0.9877 2.470 0.01351 * G_262882_252C/T -1.0471 0.3724 -2.812 0.00492 ** Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7742 0.2948 -2.626 0.00865 ** G_262882_252C/T -15.1289 4127.8724 -0.004 0.99708 -------------------------------------------------------- *** G_121540_174 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1936414 0.3958571 10.5938267 3.183074e-26 G_121540_174A/G 0.2524433 0.5944742 0.4246497 6.710920e-01 G_121540_174G/G -11.9456068 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0166586 0.4499899 -2.259292 0.02386521 G_121540_174A/G 0.1893866 0.9965307 0.190046 0.84927312 G_121540_174G/G 6.9153444 NaN NaN NaN -------------------------------------------------------- *** G_121540_874 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.4502836 0.5966692 7.4585445 8.748347e-14 G_121540_874G/A -0.2201593 0.5248872 -0.4194412 6.748938e-01 G_121540_874G/G -0.4514340 0.5566363 -0.8110036 4.173636e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1246786 0.8657310 -1.2991086 0.1939067 G_121540_874G/A -0.4779613 1.1348072 -0.4211828 0.6736216 G_121540_874G/G 0.5050804 0.9914823 0.5094195 0.6104582 -------------------------------------------------------- *** G_152845_180 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.529700 0.5126384 10.786746 3.976209e-27 G_152845_180G/A -1.304191 0.5348601 -2.438377 1.475336e-02 G_152845_180G/G -1.453382 0.4642821 -3.130385 1.745772e-03 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -18.24749 4585.240 -0.003979614 0.9968247 G_152845_180G/A 17.46451 4585.241 0.003808854 0.9969610 G_152845_180G/G 17.08466 4585.241 0.003726011 0.9970271 -------------------------------------------------------- *** G_152845_240 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.5683807 0.5412016 8.4411812 3.141467e-17 G_152845_240C/T -0.3709490 0.5503788 -0.6739885 5.003186e-01 G_152845_240T/T -0.1923858 0.5883191 -0.3270092 7.436609e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) 0.1822147 0.540930 0.3368545 0.7362266 G_152845_240C/T -1.5312696 1.000806 -1.5300359 0.1260078 G_152845_240T/T -1.4535289 1.002372 -1.4500892 0.1470336 -------------------------------------------------------- *** G_183332_963 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1689697 0.3893358 10.7079025 9.345519e-27 G_183332_963C/T 0.1214364 0.4764142 0.2548967 7.988029e-01 G_183332_963T/T 1.0879243 0.8384042 1.2976130 1.944204e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.300582 0.5818534 -2.235239980 0.0254016 G_183332_963C/T 1.098050 0.7595589 1.445642046 0.1482776 G_183332_963T/T -15.513256 4477.9414745 -0.003464372 0.9972358 -------------------------------------------------------- *** G_100265_641 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.317348 0.4172828 10.3463361 4.348082e-25 G_100265_641C/T -0.731742 0.3282926 -2.2289323 2.581841e-02 G_100265_641T/T 0.132918 0.7752836 0.1714443 8.638744e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7144728 0.3179285 -2.24727477 0.02462247 G_100265_641C/T -8.9927520 205.6076340 -0.04373744 0.96511369 G_100265_641T/T 0.7380927 0.9805295 0.75274910 0.45160070 -------------------------------------------------------- *** G_600228_243 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0965829 0.3762653 10.8874844 1.322427e-27 G_600228_243A/C 0.5994353 0.4268604 1.4042888 1.602329e-01 G_600228_243C/C 0.8199007 0.9137615 0.8972808 3.695691e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1944036 0.6214550 -1.921947233 0.0546124 G_600228_243A/C 0.9025831 0.7914692 1.140389342 0.2541241 G_600228_243C/C -15.6717982 4596.7320487 -0.003409335 0.9972797 -------------------------------------------------------- *** G_260500_369 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1923468 0.4065497 10.3120160 6.218303e-25 G_260500_369C/T 0.5729663 0.8091462 0.7081122 4.788756e-01 G_260500_369T/T 0.8858892 1.0088446 0.8781226 3.798772e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.132039 0.4447859 -2.545133161 0.010923607 G_260500_369C/T 2.032699 0.7751590 2.622299932 0.008733853 G_260500_369T/T -15.498869 4086.5404447 -0.003792663 0.996973900 -------------------------------------------------------- *** G_293928_105 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1454420 0.4040169 10.2605654 1.060838e-24 G_293928_105C/T 0.2441291 0.4633949 0.5268273 5.983135e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.98513130 0.4545748 -2.16714897 0.0302235 G_293928_105C/T 0.04003807 0.8989666 0.04453788 0.9644757 -------------------------------------------------------- *** G_203955_360 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.338144 0.4671807 7.145296 8.980210e-13 G_203955_360A/G 1.048002 0.3887255 2.695996 7.017861e-03 G_203955_360G/G 0.929282 0.4132772 2.248568 2.454000e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.14909 3779.760 -0.004272518 0.9965910 G_203955_360A/G 15.44062 3779.761 0.004085080 0.9967406 G_203955_360G/G 15.11854 3779.761 0.003999866 0.9968086 -------------------------------------------------------- *** G_203955_702 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.7367600 0.5388869 8.7898958 1.496987e-18 G_203955_702T/C -0.3428995 0.5238032 -0.6546342 5.127033e-01 G_203955_702T/T -0.7879895 0.7137920 -1.1039483 2.696156e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.4636078 1.013528 -1.4440718 0.1487188 G_203955_702T/C 0.8011853 1.109288 0.7222520 0.4701395 G_203955_702T/T -0.4705213 2.746252 -0.1713322 0.8639626 -------------------------------------------------------- *** G_374909_24 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0628352 0.3997809 10.1626550 2.910411e-24 G_374909_24C/T 0.5546790 0.3929256 1.4116641 1.580489e-01 G_374909_24T/T 0.5487938 0.9481304 0.5788168 5.627128e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0632576 0.5532345 -1.921893084 0.05461921 G_374909_24C/T 0.3240259 0.7573877 0.427820332 0.66878193 G_374909_24T/T -15.7084617 4384.6260835 -0.003582623 0.99714149 -------------------------------------------------------- *** G_232236_534 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0945105 0.6928081 5.910021 3.420633e-09 G_232236_534G/A -0.2338094 0.6716692 -0.348102 7.277636e-01 G_232236_534G/G 0.2461159 0.6211958 0.396197 6.919597e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -2.579654 4.863514 -0.5304094 0.5958281 G_232236_534G/A 0.843222 4.992160 0.1689093 0.8658680 G_232236_534G/G 2.043408 4.862505 0.4202377 0.6743118 -------------------------------------------------------- *** G_232236_1065 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.6433081 0.5812558 6.267994 3.657289e-10 G_232236_1065G/A 0.7182561 0.4666553 1.539158 1.237658e-01 G_232236_1065G/G 0.4606366 0.4405351 1.045630 2.957320e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.77513 4612.675 -0.003636747 0.9970983 G_232236_1065G/A 16.64938 4612.675 0.003609485 0.9971201 G_232236_1065G/G 15.30917 4612.675 0.003318934 0.9973519 -------------------------------------------------------- *** G_231234_204 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 2.7519 0.9100 3.024 0.00249 ** G_231234_204C/T -0.7593 0.2951 -2.574 0.01007 * Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.5793 0.3170 -1.827 0.0676 . G_231234_204C/T -14.1754 4610.8679 -0.003 0.9975 -------------------------------------------------------- *** G_231234_351 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.947467 0.3565508 11.071260 1.729510e-28 G_231234_351A/C 1.067012 0.4492974 2.374845 1.755634e-02 G_231234_351C/C 1.457070 0.6877869 2.118490 3.413360e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.4182930 1.058732 -1.3396150 0.1803705 G_231234_351A/C 0.2066404 1.184504 0.1744531 0.8615094 G_231234_351C/C 1.4080018 1.458118 0.9656294 0.3342297 -------------------------------------------------------- *** G_231234_1035 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9564322 0.6545391 6.0446079 1.497738e-09 G_231234_1035C/C 0.2892985 0.6335807 0.4566087 6.479523e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.7449978 2.343173 -0.7447158 0.4564435 G_231234_1035C/C 0.8418729 2.325991 0.3619416 0.7173957 -------------------------------------------------------- *** G_231234_2083 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 2.7269 1.1579 2.355 0.0185 * G_231234_2083G/G -0.4479 0.6773 -0.661 0.5085 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.5833 0.8869 -0.658 0.511 G_231234_2083G/G -0.3968 0.9605 -0.413 0.67 -------------------------------------------------------- *** G_225441_354 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9716831 1.074433 3.6965374 0.0002185601 G_225441_354T/C -0.2020550 1.082188 -0.1867098 0.8518881763 G_225441_354T/T 0.5294133 1.030768 0.5136107 0.6075242299 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) 0.05721023 1.220387 0.04687877 0.9626098 G_225441_354T/C -2.11646701 2.421941 -0.87387224 0.3821878 G_225441_354T/T -1.13631565 1.276956 -0.88986283 0.3735395 -------------------------------------------------------- *** G_251818_120 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0458672 0.4482154 9.026613 1.770669e-19 G_251818_120C/T 0.6464823 0.4632607 1.395504 1.628639e-01 G_251818_120T/T 1.2729030 0.7420622 1.715359 8.627944e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.178999 0.4745732 -2.484335 0.01297938 G_251818_120C/T 1.424507 0.7022542 2.028477 0.04251156 G_251818_120T/T 1.531314 1.0450640 1.465282 0.14284392 -------------------------------------------------------- *** G_142225_405 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.6134438 1.558274 2.3188763 0.02040175 G_142225_405T/C 0.6479509 1.611119 0.4021744 0.68755567 G_142225_405T/T 0.5663684 1.604024 0.3530922 0.72401930 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.9348904 8.450718 -0.22896166 0.8188987 G_142225_405T/C 0.9209867 8.448463 0.10901234 0.9131927 G_142225_405T/T 0.3424212 8.345093 0.04103264 0.9672699 -------------------------------------------------------- *** G_623775_504 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 2.91985922 1.047149 2.78838878 0.005297093 G_623775_504T/C -0.07219825 1.223603 -0.05900461 0.952948435 G_623775_504T/T 1.41900850 1.053638 1.34677015 0.178054272 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -14.218457 4366.268 -3.256433e-03 0.9974017 G_623775_504T/C -3.312141 45915.243 -7.213598e-05 0.9999424 G_623775_504T/T 13.159517 4366.268 3.013905e-03 0.9975953 -------------------------------------------------------- *** G_240627_207 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0174543 0.4203252 9.5579657 1.200940e-21 G_240627_207C/T 0.3578268 0.3701223 0.9667799 3.336541e-01 G_240627_207T/T 1.9102381 0.6903826 2.7669269 5.658743e-03 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8648872 0.5213776 -1.6588501 0.0971460 G_240627_207C/T -0.6110903 0.8160234 -0.7488637 0.4539394 G_240627_207T/T 0.8648392 1.5072979 0.5737679 0.5661248 -------------------------------------------------------- *** G_340268_193 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.182383 0.7134317 7.264021 3.757486e-13 G_340268_193G/A -1.997951 0.9637520 -2.073097 3.816326e-02 G_340268_193G/G -1.017860 0.6282159 -1.620239 1.051809e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.10631115 1.161800 -0.95223906 0.3409758 G_340268_193G/A -0.27297180 2.817370 -0.09688887 0.9228146 G_340268_193G/G 0.05635146 1.213533 0.04643587 0.9629628 -------------------------------------------------------- *** G_176851_1011 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3353183 0.3906926 11.0964958 1.304590e-28 G_176851_1011C/T -0.4598535 0.6974919 -0.6592959 5.097058e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8386122 0.3994764 -2.0992786 0.03579235 G_176851_1011C/T -1.3098823 3.7465431 -0.3496242 0.72662071 -------------------------------------------------------- *** G_114449_398 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.8636409 0.5509538 8.827674 1.068749e-18 G_114449_398C/A -0.6723649 0.5418350 -1.240903 2.146415e-01 G_114449_398C/C -0.7456383 0.5674783 -1.313950 1.888629e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8411664 0.7049925 -1.1931565 0.2328081 G_114449_398C/A -0.1771827 1.0183140 -0.1739962 0.8618685 G_114449_398C/C -0.5683964 1.2283484 -0.4627322 0.6435563 -------------------------------------------------------- *** G_271499_1357 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.1277842 0.4259871 9.6899287 3.327609e-22 G_271499_1357A/G 0.1971420 0.3639079 0.5417359 5.880004e-01 G_271499_1357G/G -0.7743513 0.7489933 -1.0338562 3.012034e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.8293923 0.4579206 -1.811214385 0.07010767 G_271499_1357A/G -0.3423243 0.7158267 -0.478222331 0.63249197 G_271499_1357G/G -14.7760446 4642.9402161 -0.003182476 0.99746076 -------------------------------------------------------- *** G_239007_161 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9370 0.4217 9.337 <2e-16 *** G_239007_161G/A -0.5660 0.4729 -1.197 0.231 G_239007_161G/G 0.3963 0.3937 1.007 0.314 -------------------------------------------------------- *** G_239007_528 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.522065 0.2323050 19.466068 2.130102e-84 G_239007_528A/G -1.245987 0.4297241 -2.899504 3.737531e-03 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.150743 0.5655268 -2.034816307 0.04186936 G_239007_528A/G -15.424490 5267.6177007 -0.002928172 0.99766366 -------------------------------------------------------- *** G_244860_1665 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3329709 0.4010015 10.805374 3.246306e-27 G_244860_1665C/T -0.4956509 0.3872887 -1.279797 2.006165e-01 G_244860_1665T/T 0.1036626 0.6182244 0.167678 8.668366e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0228172 0.6500339 -1.573482809 0.1156071 G_244860_1665C/T -14.9708633 4397.2436766 -0.003404602 0.9972835 G_244860_1665T/T 0.3351637 1.0213904 0.328144569 0.7428024 -------------------------------------------------------- *** G_138885_311 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0721165 0.4329083 9.4064189 5.133285e-21 G_138885_311C/T 0.3050805 0.3977028 0.7671068 4.430180e-01 G_138885_311T/T 0.1214500 0.4205362 0.2887979 7.727360e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.83099410 0.5555337 -1.495848339 0.1346932 G_138885_311C/T 0.05879899 0.6900200 0.085213464 0.9320917 G_138885_311T/T -16.58992502 3822.5305584 -0.004340037 0.9965372 -------------------------------------------------------- *** G_251880_684 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.8532768 0.4401352 8.754757 2.045444e-18 G_251880_684C/T 0.6484602 0.3883154 1.669932 9.493286e-02 G_251880_684T/T 1.4558226 0.6013243 2.421028 1.547671e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.4777516 1.030184 -1.4344534 0.1514429 G_251880_684C/T 0.8164278 1.070856 0.7624069 0.4458172 G_251880_684T/T 1.6968945 1.309038 1.2962916 0.1948750 -------------------------------------------------------- *** G_251880_2079 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.8567497 0.4076940 9.459913 3.082008e-21 G_251880_2079C/T 0.7088246 0.4123052 1.719174 8.558260e-02 G_251880_2079T/T 1.9751636 0.5847506 3.377788 7.307131e-04 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.4663309 1.078321 -1.3598281 0.1738843 G_251880_2079C/T 0.7534567 1.120938 0.6721664 0.5014777 G_251880_2079T/T 0.7728142 1.631901 0.4735669 0.6358088 -------------------------------------------------------- *** G_622808_242 *** -------------------------------------------------------- *** G_193618_387 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0331922 0.4377282 9.2139201 3.144273e-20 G_193618_387C/T 0.2218062 0.3984986 0.5566047 5.777976e-01 G_193618_387T/T 0.7375342 0.5570791 1.3239309 1.855260e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.452226 0.8024950 -1.8096390 0.07035180 G_193618_387C/T 0.602039 0.9073796 0.6634919 0.50701555 G_193618_387T/T 1.861433 0.9885013 1.8830855 0.05968878 -------------------------------------------------------- *** G_417237_213 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.18048247 0.4286720 9.7521717 1.805635e-22 G_417237_213C/T 0.05679452 0.3840903 0.1478676 8.824472e-01 G_417237_213T/T -0.23012564 0.4735092 -0.4860004 6.269669e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.91825153 0.4733802 -1.939775914 0.05240693 G_417237_213C/T 0.03582192 0.6895793 0.051947502 0.95857052 G_417237_213T/T -15.06366074 3567.0235358 -0.004223034 0.99663052 -------------------------------------------------------- *** G_417237_294 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.6703359 0.4545970 8.073823 6.813037e-16 G_417237_294A/G 0.7238364 0.3609200 2.005532 4.490623e-02 G_417237_294G/G 0.5574772 0.4986912 1.117880 2.636181e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -14.68165 3732.017 -0.003933971 0.9968612 G_417237_294A/G 13.68141 3732.017 0.003665956 0.9970750 G_417237_294G/G 14.15528 3732.017 0.003792930 0.9969737 -------------------------------------------------------- *** G_194809_624 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0103154 0.3840938 10.440980 1.611385e-25 G_194809_624A/G 0.7006478 0.3928550 1.783477 7.450867e-02 G_194809_624G/G 2.5204409 0.5353543 4.707986 2.501757e-06 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9408526 0.4603237 -2.04389343 0.04096408 G_194809_624A/G -0.2107998 0.7956338 -0.26494578 0.79105123 G_194809_624G/G -15.8086420 4336.1721933 -0.00364576 0.99709111 -------------------------------------------------------- *** G_194809_1116 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.7363245 0.6190883 7.6504827 2.002263e-14 G_194809_1116G/A -0.4640791 0.5394736 -0.8602443 3.896544e-01 G_194809_1116G/G -0.8027022 0.5531540 -1.4511370 1.467417e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.2996331 1.150767 -1.1293627 0.2587449 G_194809_1116G/A 0.4751332 1.236003 0.3844110 0.7006738 G_194809_1116G/G 0.2336825 1.293445 0.1806668 0.8566292 -------------------------------------------------------- *** G_373156_174 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.78044619 0.7894502 4.7887077 1.678587e-06 G_373156_174T/C 0.79345733 0.7908963 1.0032381 3.157460e-01 G_373156_174T/T 0.08984118 0.8340530 0.1077164 9.142207e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.6147423 2.925087 -0.5520323 0.5809262 G_373156_174T/C 1.2407238 2.925905 0.4240479 0.6715309 G_373156_174T/T -0.8134944 3.722095 -0.2185582 0.8269942 -------------------------------------------------------- *** G_373156_509 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 5.1071476 1.0161072 5.0261899 5.003205e-07 G_373156_509G/A -1.2662191 1.1837803 -1.0696403 2.847813e-01 G_373156_509G/G -0.8905272 0.9977511 -0.8925344 3.721066e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.75433 4346.683 -0.003854510 0.9969246 G_373156_509G/A 15.23278 4346.688 0.003504457 0.9972039 G_373156_509G/G 15.83992 4346.684 0.003644139 0.9970924 -------------------------------------------------------- *** G_397528_23 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.19695479 0.5024557 8.35288604 6.661491e-17 G_397528_23A/G 0.01262174 0.4587712 0.02751206 9.780513e-01 G_397528_23G/G -0.02017077 0.5370639 -0.03755748 9.700405e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.1879926 0.7432159 -1.5984489 0.1099431 G_397528_23A/G 0.6506665 0.8557139 0.7603785 0.4470284 G_397528_23G/G -0.6463978 1.5547604 -0.4157540 0.6775900 -------------------------------------------------------- *** G_201987_732 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.07905865 0.8437563 4.8344036 1.335454e-06 G_201987_732G/A 0.05296745 0.8086856 0.0654982 9.477773e-01 G_201987_732G/G 0.16156792 0.8014344 0.2015984 8.402307e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0679008 1.523445 -0.7009774 0.4833171 G_201987_732G/A 0.4059047 1.581956 0.2565841 0.7974999 G_201987_732G/G -0.3837319 1.644897 -0.2332862 0.8155391 -------------------------------------------------------- *** G_201987_954 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.6214773 0.6387899 7.2347381 4.664284e-13 G_201987_954G/A -0.3908615 0.6236124 -0.6267699 5.308101e-01 G_201987_954G/G -0.5135040 0.5841752 -0.8790241 3.793882e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9084222 0.8823924 -1.0294992 0.3032452 G_201987_954G/A 0.5091173 1.0109411 0.5036073 0.6145374 G_201987_954G/G -0.4671193 1.1217647 -0.4164147 0.6771066 -------------------------------------------------------- *** G_297458_264 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0869497 0.5005523 8.16488039 3.217539e-16 G_297458_264T/C 0.1619382 0.4432029 0.36538158 7.148266e-01 G_297458_264T/T -0.0128764 0.4644067 -0.02772656 9.778802e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -17.84909 3661.646 -0.004874610 0.9961106 G_297458_264T/C 17.28717 3661.646 0.004721146 0.9962331 G_297458_264T/T 16.71947 3661.646 0.004566106 0.9963568 -------------------------------------------------------- *** G_199628_214 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.351810306 1.073421 4.054151755 5.031655e-05 G_199628_214T/A -0.735239787 1.189115 -0.618308356 5.363721e-01 G_199628_214T/T -0.009486208 1.054837 -0.008993054 9.928247e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.44065 3715.704 -0.004424639 0.9964697 G_199628_214T/A 12.78132 3715.724 0.003439793 0.9972554 G_199628_214T/T 15.69804 3715.704 0.004224782 0.9966291 -------------------------------------------------------- *** G_254919_291 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.21279022 0.8363413 5.03716612 4.724747e-07 G_254919_291T/C -0.11004876 0.8850127 -0.12434709 9.010405e-01 G_254919_291T/T 0.05338976 0.8496749 0.06283552 9.498975e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.4735296 2.205063 -0.6682482 0.5039752 G_254919_291T/C 0.6290860 2.275545 0.2764551 0.7821986 G_254919_291T/T 0.3756483 2.211936 0.1698278 0.8651455 -------------------------------------------------------- *** G_201724_525 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 2.0800 1.2119 1.716 0.0861 . G_201724_525G/T 0.2484 0.7455 0.333 0.7390 --- Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9977 0.4504 -2.215 0.0268 * G_201724_525G/T -0.3432 1.4692 -0.234 0.8153 -------------------------------------------------------- *** G_26438_387 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.7488711 0.4541104 8.255417 1.513727e-16 G_26438_387C/T 0.4550716 0.3881273 1.172480 2.410042e-01 G_26438_387T/T 1.8715738 0.3911891 4.784319 1.715677e-06 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.94612671 0.6080648 -1.55596372 0.1197167 G_26438_387C/T -0.05096015 0.7599537 -0.06705692 0.9465364 G_26438_387T/T -0.84616121 1.2397532 -0.68252391 0.4949077 -------------------------------------------------------- *** G_329556_606 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2114702 0.3903974 10.7876498 3.937295e-27 G_329556_606A/T -0.2267557 0.7566266 -0.2996931 7.644113e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0346579 0.4330729 -2.3891077 0.01688935 G_329556_606A/T 0.1959667 1.4200364 0.1380012 0.89023948 -------------------------------------------------------- *** G_242486_426 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.029919 0.6109319 4.959503 7.067369e-07 G_242486_426G/A 1.200194 0.5004647 2.398160 1.647767e-02 G_242486_426G/G 1.176055 0.5103996 2.304185 2.121224e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -13.99010 3869.953 -0.003615055 0.9971156 G_242486_426G/A 13.08998 3869.954 0.003382465 0.9973012 G_242486_426G/G 12.95516 3869.954 0.003347626 0.9973290 -------------------------------------------------------- *** G_437039_207 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.08393447 0.6373818 6.4073599 1.480610e-10 G_437039_207G/A 0.08463976 0.5830176 0.1451753 8.845725e-01 G_437039_207G/G 0.17674956 0.6047967 0.2922462 7.700984e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.94366893 0.9830859 -0.95990484 0.3371031 G_437039_207G/A -0.04173179 1.0985007 -0.03798977 0.9696958 G_437039_207G/G -0.04074332 1.1191179 -0.03640664 0.9709581 -------------------------------------------------------- *** G_278191_379 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0335478 0.4954666 8.1409076 3.923256e-16 G_278191_379C/T 0.1423562 0.4752925 0.2995129 7.645487e-01 G_278191_379T/T 0.4576399 0.5431129 0.8426239 3.994388e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.7128633 1.460451 -1.1728321 0.2408632 G_278191_379C/T 0.6987999 1.491591 0.4684930 0.6394321 G_278191_379T/T 1.4102487 1.519819 0.9279057 0.3534565 -------------------------------------------------------- *** G_43500_219 *** -------------------------------------------------------- *** G_43500_562 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.8855569 0.8593517 4.5214978 6.140361e-06 G_43500_562C/G 0.5499753 0.7990969 0.6882461 4.912978e-01 G_43500_562G/G 0.1585668 0.8723230 0.1817753 8.557591e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -2.7639067 8.476519 -0.32606623 0.7443742 G_43500_562C/G 2.4279330 8.456335 0.28711410 0.7740250 G_43500_562G/G 0.6734325 8.805475 0.07647883 0.9390382 -------------------------------------------------------- *** G_182044_141 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2025000 0.3718952 11.300228 1.308784e-29 G_182044_141C/T 0.4814966 0.4208106 1.144212 2.525357e-01 G_182044_141T/T 1.0260778 0.8396522 1.222027 2.216974e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9711583 0.4438580 -2.187993327 0.02867009 G_182044_141C/T 0.5058906 0.6686556 0.756578737 0.44930228 G_182044_141T/T -15.4249397 3633.8538042 -0.004244788 0.99661316 -------------------------------------------------------- *** G_306701_582 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.16958409 0.5126247 8.13379508 4.160556e-16 G_306701_582A/G 0.06068684 1.3014067 0.04663172 9.628067e-01 G_306701_582G/G -10.17516063 NaN NaN NaN Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.9799851 0.443798 -2.2081782 0.02723185 G_306701_582A/G -0.7970229 3.372546 -0.2363268 0.81317910 G_306701_582G/G 5.5905184 NaN NaN NaN -------------------------------------------------------- *** G_306701_957 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.7283652 0.4307107 8.656310 4.872820e-18 G_306701_957C/T 0.5587835 0.3167676 1.764017 7.772912e-02 G_306701_957T/T 0.7451757 0.3782352 1.970138 4.882253e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -17.07095 3867.473 -0.004413980 0.9964782 G_306701_957C/T 16.43817 3867.473 0.004250363 0.9966087 G_306701_957T/T 16.53982 3867.473 0.004276647 0.9965877 -------------------------------------------------------- *** G_343154_267 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.5025232 0.3302015 10.607229 2.758072e-26 G_343154_267T/C 1.2614118 0.2863153 4.405674 1.054552e-05 G_343154_267T/T 0.8305837 0.4558576 1.822025 6.845126e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -21.90662 64091.41 -0.0003418027 0.9997273 G_343154_267T/C 21.40093 64091.41 0.0003339126 0.9997336 G_343154_267T/T 20.49712 64091.41 0.0003198106 0.9997448 -------------------------------------------------------- *** G_343154_386 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0728764 0.4600117 8.853855 8.454756e-19 G_343154_386C/T 0.2136214 0.3605059 0.592560 5.534757e-01 G_343154_386T/T -1.5279087 1.0397132 -1.469548 1.416841e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.7644559 0.4532355 -1.686663748 0.09166803 G_343154_386C/T -0.6844200 0.7724003 -0.886094924 0.37556638 G_343154_386T/T -13.1606586 4129.5751812 -0.003186928 0.99745720 -------------------------------------------------------- *** G_343154_1452 *** -------------------------------------------------------- *** G_343154_1475 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2976946 0.3552749 12.096816 1.097871e-33 G_343154_1475C/T -0.5613371 0.4295569 -1.306782 1.912868e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.029303 0.4512396 -2.28105595 0.02254514 G_343154_1475C/T -12.875542 3657.8556328 -0.00351997 0.99719148 -------------------------------------------------------- *** G_343154_1558 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.3213590 0.381849 11.3169308 1.081938e-29 G_343154_1558C/T -0.5856240 1.199277 -0.4883142 6.253273e-01 G_343154_1558T/T 0.8556631 1.392230 0.6145989 5.388196e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0470311 0.463616 -2.2584016 0.02392063 G_343154_1558C/T -0.5448428 4.377079 -0.1244763 0.90093814 G_343154_1558T/T 0.8330961 1.777890 0.4685871 0.63936479 -------------------------------------------------------- *** G_260893_408 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.8418446 1.028289 4.7086426 2.493719e-06 G_260893_408G/A -1.1261463 1.020112 -1.1039434 2.696177e-01 G_260893_408G/G -0.5788689 1.051879 -0.5503191 5.821005e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -18.745967 11766.17 -0.0015932083 0.9987288 G_260893_408G/A 3.860351 12498.72 0.0003088596 0.9997536 G_260893_408G/G 17.813510 11766.17 0.0015139594 0.9987920 -------------------------------------------------------- *** G_260893_945 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.25934997 0.6025907 7.0683969 1.567338e-12 G_260893_945T/G -0.07644871 0.5740687 -0.1331700 8.940590e-01 G_260893_945T/T -0.06831859 0.6038622 -0.1131361 9.099227e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0431448 0.9805371 -1.0638504 0.2873965 G_260893_945T/G -0.1222971 1.1282452 -0.1083958 0.9136817 G_260893_945T/T 0.1647351 1.1188053 0.1472419 0.8829411 -------------------------------------------------------- *** G_198248_1498 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2430078 0.4421231 9.5968915 8.239176e-22 G_198248_1498G/A -0.0266599 0.3922327 -0.0679696 9.458098e-01 G_198248_1498G/G -0.2673849 0.6578776 -0.4064356 6.844226e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0447498 0.5903167 -1.7698124 0.0767584 G_198248_1498G/A 0.1982917 0.7363219 0.2693002 0.7876986 G_198248_1498G/G -0.2735571 1.6314894 -0.1676732 0.8668404 -------------------------------------------------------- *** G_428039_473 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.05492970 0.7913975 5.12375826 2.995049e-07 G_428039_473G/A 0.37355614 0.7578368 0.49292424 6.220661e-01 G_428039_473G/G 0.01924941 0.7519396 0.02559968 9.795766e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.55420 4083.524 -0.004053900 0.9967655 G_428039_473G/A 16.08559 4083.524 0.003939143 0.9968570 G_428039_473G/G 15.40713 4083.524 0.003772997 0.9969896 -------------------------------------------------------- *** G_428039_659 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.9948863 0.3905263 10.229493 1.462827e-24 G_428039_659C/T 0.5891555 0.4332744 1.359774 1.739013e-01 G_428039_659T/T 0.9136810 0.7062610 1.293687 1.957734e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.26419881 0.8927480 -1.416075708 0.1567533 G_428039_659C/T 0.44285753 0.9854815 0.449381878 0.6531562 G_428039_659T/T 0.01444938 1.5909982 0.009081961 0.9927537 -------------------------------------------------------- *** G_428039_1406 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.5121249 0.4180166 10.794129 3.669249e-27 G_428039_1406C/T -0.8292617 0.4325265 -1.917251 5.520607e-02 G_428039_1406T/T -1.3980120 0.4866032 -2.873002 4.065912e-03 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.4941473 0.2696813 -1.832337991 0.06690108 G_428039_1406C/T -1.7686989 2.5055048 -0.705925139 0.48023469 G_428039_1406T/T -15.8584176 4234.7008589 -0.003744873 0.99701203 -------------------------------------------------------- *** G_128936_282 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.3209910 0.5304667 6.260508 3.837245e-10 G_128936_282C/T 0.8559592 0.3988030 2.146321 3.184740e-02 G_128936_282T/T 1.0806228 0.4151075 2.603236 9.234825e-03 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -16.34534 4325.789 -0.003778580 0.9969851 G_128936_282C/T 15.37742 4325.789 0.003554825 0.9971637 G_128936_282T/T 15.76732 4325.789 0.003644958 0.9970918 -------------------------------------------------------- *** G_271698_251 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.4345875 0.5494971 6.250419 4.093520e-10 G_271698_251G/A 0.8372225 0.3607625 2.320702 2.030291e-02 G_271698_251G/G 0.8206151 0.3712716 2.210282 2.708559e-02 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -17.20375 4520.686 -0.003805561 0.9969636 G_271698_251G/A 16.80084 4520.686 0.003716437 0.9970347 G_271698_251G/G 16.32906 4520.686 0.003612075 0.9971180 -------------------------------------------------------- *** G_341837_617 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.0987779 0.4058949 10.0981262 5.630775e-24 G_341837_617C/T 0.3463890 0.4316449 0.8024861 4.222719e-01 G_341837_617T/T -0.6764027 0.6435390 -1.0510671 2.932278e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.0239968 0.7093447 -1.443581461 0.1488567 G_341837_617C/T 0.1039172 0.7979938 0.130223064 0.8963899 G_341837_617T/T -14.5356704 4462.1563421 -0.003257544 0.9974009 -------------------------------------------------------- *** G_373029_222 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 4.2849017 0.3933293 10.8939295 1.232069e-27 G_373029_222C/T 0.1152901 0.4206436 0.2740802 7.840230e-01 G_373029_222T/T -0.3149382 0.8960253 -0.3514836 7.252255e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.5810685 1.115481 -1.4173873 0.1563697 G_373029_222C/T 0.5893725 1.130465 0.5213541 0.6021201 G_373029_222T/T 1.2749349 1.712354 0.7445512 0.4565431 -------------------------------------------------------- *** G_187211_1709 *** Conditional model: Estimate Std. Error z value Pr(>|z|) (Intercept) 3.8445674 0.4891020 7.8604616 3.827203e-15 G_187211_1709G/A 0.5921423 0.4311371 1.3734431 1.696146e-01 G_187211_1709G/G 0.3567686 0.7808781 0.4568814 6.477563e-01 Zero-inflation model: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.5094547 1.276028 -1.1829321 0.2368361 G_187211_1709G/A 0.5582971 1.295774 0.4308599 0.6665702 G_187211_1709G/G 1.0302107 1.576821 0.6533467 0.5135328 --------------------------------------------------------