Transcript_ID	Gene_id	Symbol	Description	Protein_coding_within_3kb	Database_source	DLD1_P53WT_1	DLD1_P53WT_2	DLD1_P53WT_3	DLD1_P53R175H_1	DLD1_P53R175H_2	DLD1_P53R175H_3	G1	G2	G2_vs_G1_log2FoldChange	G2_vs_G1_Pvalue	G2_vs_G1_FDR
ENST00000432521	ENSG00000238164	TNFRSF14-AS1	TNFRSF14 antisense RNA 1	ENST00000435221,ENST00000355716,ENST00000451778,ENST00000426449,ENST00000442392,ENST00000434817,ENST00000482074,ENST00000475523,ENST00000496064,ENST00000463471,ENST00000409119	Known_LncRNA	5.38331164297975	5.30352947796978	4.99338320471341	4.09547484358913	3.16419738941065	3.57598888645591	5.22674144188765	3.61188703981856	-1.61485440206908	0.0001139771307367	0.0042836455571097
ENST00000471662	ENSG00000218416	PP14571	uncharacterized LOC100130449	ENST00000469694,ENST00000264039,ENST00000420138	Known_LncRNA	4.3798148151432	4.12903995217031	4.69600449005581	2.59205871498577	2.71699925234103	1.57844177650516	4.40161975245644	2.29583324794399	-2.10578650451245	0.0001786506189311	0.0063457851268283
ENST00000657993	---	---	---	ENST00000475616,ENST00000383657,ENST00000578202,ENST00000469317,ENST00000346322,ENST00000464489,ENST00000583087,ENST00000360772,ENST00000354792,ENST00000360304,ENST00000418370,ENST00000359169	Known_LncRNA	0.0	0.0	0.0	3.3295905012907	2.71699925234103	3.69140315438841	0.0	3.24599763600671	3.24599763600671	0.000175210416601	0.0062566659725171
MSTRG.1456.13	---	---	---	ENST00000564627,ENST00000414478,ENST00000637508,ENST00000272203	Predicted_LncRNA	9.26275652205389	4.65510426225214	8.16485096765562	0.0	0.0	0.0	7.36090391732055	0.0	-7.36090391732055	8.6749236876012e-11	1.46753912858067e-08
MSTRG.5417.18	---	---	---	ENST00000394685,ENST00000356249,ENST00000220244	Predicted_LncRNA	9.84434632032608	10.0349539435357	10.2254113616154	11.2240407092989	11.374775727186	11.3543462105014	10.0349038751591	11.3177208823288	1.28281700716971	1.7958866624835e-27	1.6138729773023701e-24
MSTRG.5417.17	---	---	---	ENST00000394685,ENST00000356249,ENST00000220244	Predicted_LncRNA	9.98421863505772	10.1469473550076	10.2649071554705	11.3594472108023	11.4157271039177	11.3996023765199	10.1320243818453	11.3915922304133	1.25956784856803	6.69909029920536e-47	2.10035833807619e-43
ENST00000421927	ENSG00000215424	MCM3AP-AS1	MCM3AP antisense RNA 1	ENST00000472272,ENST00000356396,ENST00000486937,ENST00000496607,ENST00000457828,ENST00000450351,ENST00000464357,ENST00000467026,ENST00000397728,ENST00000291688,ENST00000397708,ENST00000522411	Known_LncRNA	2.10538738708104	0.0	0.0	6.15813886850856	3.50508327311319	6.54490120234191	0.70179579569368	5.40270778132122	4.70091198562754	2.91475494220531e-05	0.0012863213803123
MSTRG.12273.2	---	---	---	ENST00000326639,ENST00000432347,ENST00000512292,ENST00000508819,ENST00000650359,ENST00000649983,ENST00000394288,ENST00000648358	Predicted_LncRNA	5.49319166713906	5.22085284013498	5.85699660357162	4.25599207927317	3.28699557481754	4.45008599028347	5.52368037028189	3.99769121479139	-1.52598915549049	0.000907768852974	0.024888319457522
ENST00000424148	ENSG00000233930	KRTAP5-AS1	KRTAP5-1/KRTAP5-2 antisense RNA 1	ENST00000412090,ENST00000382171,ENST00000397374	Known_LncRNA	7.39539473865719	7.72902426372491	7.6292705149289	6.54757883672895	5.96174877156037	6.09887467607581	7.584563172437	6.20273409478838	-1.38182907764862	4.75861271117685e-08	3.62322261303032e-06
ENST00000654033	---	---	---	ENST00000565610,ENST00000562741,ENST00000301012,ENST00000565842,ENST00000563170,ENST00000568133,ENST00000569177,ENST00000332281,ENST00000568709,ENST00000563463,ENST00000563785,ENST00000562651,ENST00000567064	Known_LncRNA	0.0	0.0	0.0	5.0957245031157	5.2938424990415	5.48227925186498	0.0	5.29061541800739	5.29061541800739	1.14226356220552e-09	1.5749515580058e-07
MSTRG.8766.2	---	---	---	ENST00000448427,ENST00000483992,ENST00000296102,ENST00000476552,ENST00000379666,ENST00000472192	Predicted_LncRNA	10.0471273452857	9.56332017833218	9.76625286917731	8.69499120760786	8.76769773383732	8.81995215746204	9.79223346426506	8.76088036630241	-1.03135309796266	2.23237695092449e-10	3.55888812714163e-08
ENST00000638517	ENSG00000179406	LINC00174	long intergenic non-protein coding RNA 174	ENST00000490159	Known_LncRNA	7.91963028093536	7.71398894809206	8.07247420617044	6.29380469524937	6.77234790834156	6.92102570010646	7.90203114506595	6.66239276789913	-1.23963837716682	4.11372387087488e-07	2.65627951255833e-05
ENST00000450304	ENSG00000237886	NALT1	NOTCH1 associated lncRNA in T-cell acute lymphoblastic leukemia 1	---	Known_LncRNA	4.30142324300914	4.887276183572	4.99338320471341	0.0	0.0	0.0	4.72736087709818	0.0	-4.72736087709818	1.83745002752222e-08	1.7104163995635e-06
ENST00000660408	---	---	---	ENST00000628403,ENST00000262461,ENST00000509205,ENST00000343225	Known_LncRNA	0.0	6.04195267512228	5.48886859066514	0.0	0.0	0.0	3.84360708859581	0.0	-3.84360708859581	0.0012482092063786	0.0322540916684162
MSTRG.11016.1	---	---	---	ENST00000635992,ENST00000383767,ENST00000434693,ENST00000452462,ENST00000273139,ENST00000456853,ENST00000445033,ENST00000636680,ENST00000471426,ENST00000637842,ENST00000383766	Predicted_LncRNA	4.88884802110925	4.71674290013641	5.52649706222781	7.41785229452225	7.54356644682926	7.74514081785334	5.04402932782449	7.56885318640162	2.52482385857713	5.7945898205174395e-18	2.4404390704393e-15
ENST00000428008	ENSG00000177410	ZFAS1	ZNFX1 antisense RNA 1	ENST00000396105,ENST00000371752,ENST00000371744,ENST00000371754	Known_LncRNA	7.45092252506606	6.94343124870364	8.00076227009244	5.46775001527933	4.5422674838286	5.16040573367975	7.46503868128738	5.05680774426256	-2.40823093702482	7.64157837486378e-09	8.43611118742396e-07
ENST00000651563	---	---	---	---	Known_LncRNA	3.93673929020031	3.93521880141907	4.40418708754308	7.34830889604856	4.01187542758372	7.22867763533337	4.09204839305415	6.19628731965522	2.10423892660106	0.0012147768592836	0.0315810645886514
ENST00000661042	---	---	---	---	Known_LncRNA	5.96943787203072	5.83516555842115	5.94299452306412	4.53170422093035	4.76989455500016	5.16040573367975	5.91586598450533	4.82066816987009	-1.09519781463524	0.0003263671840249	0.0106515135923472
ENST00000435394	ENSG00000229563	LINC01204	long intergenic non-protein coding RNA 1204	---	Known_LncRNA	5.83676385498773	5.59369882454407	5.94299452306412	4.25599207927317	4.76989455500016	3.9908217898572	5.79115240086531	4.33890280804351	-1.4522495928218	6.13691596433277e-05	0.0024902076490531
ENST00000399206	ENSG00000214900	LINC01588	long intergenic non-protein coding RNA 1588	---	Known_LncRNA	5.34474309766003	2.92577554459484	5.36970995691866	0.0	0.0	0.0	4.54674286639118	0.0	-4.54674286639118	1.8158256438611e-06	0.0001037659448455
ENST00000581816	ENSG00000215417	MIR17HG	miR-17-92a-1 cluster host gene	---	Known_LncRNA	4.52487144070318	3.93521880141907	3.2182744478381	0.0	0.0	0.0	3.89278822998678	0.0	-3.89278822998678	5.07604117247195e-06	0.0002656411338804
ENST00000658528	---	---	---	---	Known_LncRNA	7.20397330915903	1.07025429696125	7.61187194855459	3.17749305791873	2.5307210267978	1.57844177650516	5.29536651822496	2.4288852870739	-2.86648123115106	0.0008002734341252	0.0224425204717804
ENST00000671125	---	---	---	---	Known_LncRNA	6.38505688364966	3.44602208564702	7.12764430570431	3.59276642044652	0.845135942920661	0.995112221966656	5.65290775833366	1.81100486177795	-3.84190289655572	0.0008263796593193	0.023049629635616
ENST00000659102	---	---	---	---	Known_LncRNA	5.75087781226197	4.93991735122516	6.51076196713624	7.29385909717929	7.24342182438093	7.47407849524247	5.73385237687446	7.3371198056009	1.60326742872644	0.0005284079062816	0.0159129166876127
MSTRG.6866.8	---	---	---	ENST00000634433	Predicted_LncRNA	6.61311754734552	6.20137956686956	5.99760443387524	5.17820053201467	4.89101200880422	5.16040573367975	6.27070051603011	5.07653942483288	-1.19416109119723	8.10188524843229e-05	0.0031805197160011
MSTRG.9167.1	---	---	---	ENST00000305476,ENST00000442264,ENST00000449330	Predicted_LncRNA	6.11404933751538	4.77585560025398	5.7966778719212	0.0	0.0	0.0	5.56219426989685	0.0	-5.56219426989685	7.01424748162791e-10	1.01396121791795e-07
ENST00000375638	ENSG00000204387	C6orf48	chromosome 6 open reading frame 48	---	Known_LncRNA	9.61644506519946	9.6527667015912	9.60413184839751	8.68091582045575	7.91125198366021	8.16016694536373	9.62444787172939	8.25077824982656	-1.37366962190283	9.157739015769051e-09	9.83293061078253e-07
MSTRG.15569.1	---	---	---	ENST00000489107,ENST00000319264	Predicted_LncRNA	9.77351700434985	9.51425937166709	9.94188034762842	8.43475136343952	8.66387286059532	8.70103771141758	9.74321890788179	8.59988731181747	-1.14333159606431	2.82822222270124e-12	5.92029995484381e-10
ENST00000668306	---	---	---	ENST00000559081,ENST00000558243,ENST00000559475,ENST00000560773,ENST00000267884,ENST00000558527,ENST00000559439,ENST00000558720	Known_LncRNA	0.0	0.0	0.0	3.17749305791873	2.5307210267978	3.69140315438841	0.0	3.13320574636831	3.13320574636831	0.0003501659071815	0.0112486811276039
ENST00000591629	ENSG00000267374	AC016205.1	---	---	Known_LncRNA	0.0	1.67789467442482	0.0	4.962433813541	4.59075687759825	4.16067858622542	0.559298224808273	4.57128975912156	4.01199153431328	1.61131257463456e-05	0.0007552719884718
MSTRG.1986.14	---	---	---	ENST00000263563	Predicted_LncRNA	0.0	0.0	0.0	1.00426191569728	3.69449135858247	6.57527267390879	0.0	3.75800864939618	3.75800864939618	0.0004055314981133	0.0127004723653324
ENST00000667009	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	1.59064226172992	3.40015646062512	5.48227925186498	0.0	3.49102599140667	3.49102599140667	0.0005900105191075	0.0174734265574823
MSTRG.10064.14	---	---	---	ENST00000373913,ENST00000482037,ENST00000401952,ENST00000491207,ENST00000479220,ENST00000339266,ENST00000340491,ENST00000475894,ENST00000373907,ENST00000482872,ENST00000495241	Predicted_LncRNA	1.07110657384614	0.0	1.12873934084006	7.46789467886203	7.99019484159379	8.67673220331437	0.733281971562067	8.04494057459006	7.311658603028	1.65110124845803e-14	4.69658413190416e-12
MSTRG.10255.21	---	---	---	ENST00000360864,ENST00000470551	Predicted_LncRNA	0.0	0.0	8.76594357335282	0.0	0.0	0.0	2.92198119111761	0.0	-2.92198119111761	4.0675387151754206e-09	4.871654518223e-07
ENST00000645764	---	---	---	---	Known_LncRNA	5.42087589929659	6.13519865432107	6.05022238376112	4.53170422093035	4.27187251206342	4.79791361743107	5.86876564579293	4.53383011680828	-1.33493552898465	0.0001942160302322	0.0068095306345453
ENST00000448718	ENSG00000234741	GAS5	growth arrest specific 5 (non-protein coding)	ENST00000427304,ENST00000367701,ENST00000367702,ENST00000367704	Known_LncRNA	8.31832497502436	9.3658462009332	7.99406272699429	7.6949706095428	6.74046516191445	7.01265121973474	8.55941130098395	7.14936233039733	-1.41004897058662	0.0016808469463726	0.0412358431524652
MSTRG.14809.5	---	---	---	ENST00000242351,ENST00000471652,ENST00000464606	Predicted_LncRNA	8.40990699386898	8.57981296717942	8.73413356801691	7.08526401298017	7.46770267907422	7.18994701135956	8.57461784302177	7.24763790113798	-1.32697994188379	1.0366864552039e-12	2.29613843943183e-10
MSTRG.9468.13	---	---	---	---	Predicted_LncRNA	0.0	2.10413881949432	8.89741287393854	0.0	0.0	0.0	3.66718389781095	0.0	-3.66718389781095	3.2687975763888104e-09	4.05261961737736e-07
MSTRG.14905.1	---	---	---	ENST00000495707,ENST00000359321	Predicted_LncRNA	5.38331164297975	5.83516555842115	5.82715245374096	6.46784645927954	7.11668792368544	6.64851658952067	5.68187655171395	6.74435032416188	1.06247377244793	0.0003699176460784	0.0117918980682141
ENST00000316124	ENSG00000181908	AP003774.1	---	---	Known_LncRNA	5.38331164297975	5.45589711024699	5.23981616391923	4.25599207927317	2.88195275838941	3.89775330696248	5.35967497238199	3.67856604820835	-1.68110892417364	0.0003795675022153	0.0120477884707669
ENST00000531071	ENSG00000255248	MIR100HG	mir-100-let-7a-2-mir-125b-1 cluster host gene	---	Known_LncRNA	0.0	0.0	0.0	3.70829806237132	2.88195275838941	2.31409968165243	0.0	2.96811683413772	2.96811683413772	0.0008828408374137	0.0243277828259814
ENST00000651948	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	3.78061920668618	2.99143549046612	0.0	3.19556935682059	3.19556935682059	0.0002356017796067	0.0080563703056618
ENST00000602760	ENSG00000270019	AC110769.2	---	ENST00000443297,ENST00000535589,ENST00000446821,ENST00000263238,ENST00000415792	Known_LncRNA	6.13680229835649	5.88970675009162	6.12571714530491	4.59312014303419	5.37914039937598	5.03489965850527	6.05074206458434	5.00238673363848	-1.04835533094586	0.0015980487771182	0.0395659557247624
ENST00000440975	ENSG00000214184	GCC2-AS1	GCC2 antisense RNA 1	ENST00000309863,ENST00000544547,ENST00000480863,ENST00000428064,ENST00000482325	Known_LncRNA	2.92718834245759	4.21698678017245	3.6855766839423	0.0	0.0	0.0	3.60991726885745	0.0	-3.60991726885745	2.11381044189148e-05	0.0009608031173504
ENST00000671452	---	---	---	ENST00000392334,ENST00000579308,ENST00000578194,ENST00000581241,ENST00000582844,ENST00000314028,ENST00000581660,ENST00000403276,ENST00000585026,ENST00000581655,ENST00000398519,ENST00000580446,ENST00000579316,ENST00000584472	Known_LncRNA	2.70159816905037	2.92577554459484	2.52273454149949	0.0	0.0	0.0	2.7167027517149	0.0	-2.7167027517149	0.0010150421984178	0.0273068324537168
MSTRG.132.20	---	---	---	ENST00000377258,ENST00000377263,ENST00000400904	Predicted_LncRNA	0.0	0.0	0.0	6.6949294125304	5.86649382209425	7.03467638096356	0.0	6.53203320519607	6.53203320519607	4.949709544281899e-12	1.00481240314194e-09
ENST00000661794	---	---	---	ENST00000646931,ENST00000371205,ENST00000491114,ENST00000423344,ENST00000602648	Known_LncRNA	2.10538738708104	0.0	0.0	5.43457866541976	6.01602202278407	5.34799945862425	0.70179579569368	5.59953338227603	4.89773758658235	1.35524206894133e-08	1.3427555689803e-06
MSTRG.3465.12	---	---	---	ENST00000381541,ENST00000540853,ENST00000381545,ENST00000261196,ENST00000540229	Predicted_LncRNA	1.67901321732037	1.07025429696125	0.0	8.49632767332623	1.37454877652998	0.995112221966656	0.91642250476054	3.62199622394096	2.70557371918042	0.0010359536354582	0.0277449936445593
MSTRG.7640.1	---	---	---	ENST00000590336,ENST00000587057,ENST00000251287,ENST00000589961,ENST00000588649,ENST00000592633	Predicted_LncRNA	5.89130610322775	5.38172386399626	5.52649706222781	4.46755710793494	4.49209149645931	4.79791361743107	5.59984234315061	4.58585407394177	-1.01398826920883	0.0018520210153162	0.0444535455952604
MSTRG.15034.2	---	---	---	ENST00000613472,ENST00000221132,ENST00000524158	Predicted_LncRNA	0.0	0.0	0.0	7.06372990611239	7.18144604814591	7.06709620461928	0.0	7.10409071962586	7.10409071962586	5.63529020584939e-15	1.69887142000615e-12
ENST00000646128	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	6.46784645927954	7.31010317787041	3.79826439941518	0.0	5.85873801218838	5.85873801218838	5.55347282971577e-08	4.13689743716441e-06
ENST00000608699	ENSG00000242086	LINC00969	long intergenic non-protein coding RNA 969	---	Known_LncRNA	0.0	1.07025429696125	0.0	6.0307485280692	6.08534938129917	5.89726217237699	0.356751432320417	6.00445336058179	5.64770192826137	1.8445268637420302e-09	2.44357376668202e-07
MSTRG.12707.4	---	---	---	ENST00000520388,ENST00000518707,ENST00000396137,ENST00000520855	Predicted_LncRNA	8.66989608581208	8.64071075900288	8.59052327656562	7.41785229452225	7.42822040075984	7.18994701135956	8.63371004046019	7.34533990221388	-1.28837013824631	1.36475998610816e-20	7.29360821666776e-18
MSTRG.7366.2	---	---	---	ENST00000473637,ENST00000527313,ENST00000526383,ENST00000335255,ENST00000570585,ENST00000531030	Predicted_LncRNA	4.21852612670637	4.52331536830339	1.75418269748789	6.73635167184815	6.40302176420781	5.60511817823939	3.49867473083255	6.24816387143178	2.74948914059923	0.0006632883614636	0.0192873100457911
ENST00000655496	---	---	---	---	Known_LncRNA	4.45416546102232	3.29255025989492	4.32097652720706	0.0	0.0	0.0	4.0225640827081	0.0	-4.0225640827081	2.25924018886681e-06	0.0001267906442986
MSTRG.14296.1	---	---	---	ENST00000402497,ENST00000407526,ENST00000644879,ENST00000406641,ENST00000643299,ENST00000645075,ENST00000401949,ENST00000439044,ENST00000465602,ENST00000644769,ENST00000335866,ENST00000644716	Predicted_LncRNA	8.2258485038471	8.06744640802393	8.05969801696937	6.65228260326375	6.75117122307862	6.90915226537353	8.11766430961347	6.77086869723863	-1.34679561237483	1.29528705631274e-16	4.722208273929e-14
ENST00000545819	ENSG00000256894	AC022509.3	---	ENST00000242728,ENST00000538142,ENST00000394326,ENST00000534829,ENST00000541271	Known_LncRNA	3.5862174472307	3.29255025989492	4.13860653563578	0.0	0.0	1.99266210906196	3.67245808092047	0.664220703020653	-3.00823737789981	0.0018015238713589	0.0435706952335523
ENST00000665353	---	---	---	ENST00000538442	Known_LncRNA	0.0	0.0	0.0	3.91483601477628	3.40015646062512	3.3131181364361	0.0	3.54270353727917	3.54270353727917	2.98874194433014e-05	0.0013143313709653
ENST00000647271	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	4.962433813541	5.40648798575404	5.27586196030474	0.0	5.21492791986659	5.21492791986659	1.95877949257662e-09	2.57558509830988e-07
ENST00000447298	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	3.29401109549286	2.10413881949432	2.52273454149949	6.60833663091492	7.10838488741155	6.16026928805306	2.64029481882889	6.62566360212651	3.98536878329762	9.512325394338561e-14	2.4268986713136297e-11
ENST00000659591	---	---	---	ENST00000565335,ENST00000361351,ENST00000564488,ENST00000395081,ENST00000567435,ENST00000565130,ENST00000563081	Known_LncRNA	0.0	0.0	0.0	2.59205871498577	3.28699557481754	3.3131181364361	0.0	3.06405747541314	3.06405747541314	0.0003471601237514	0.011169926462906
MSTRG.1915.1	---	---	---	ENST00000615923,ENST00000622861,ENST00000623662	Predicted_LncRNA	6.87910159289419	7.19154346725154	6.93122128919943	5.21773526826523	6.08534938129917	5.71831365712778	7.00062211644839	5.67379943556406	-1.32682268088433	2.68439253417072e-05	0.0011939961344926
ENST00000434868	ENSG00000223704	LINC01422	long intergenic non-protein coding RNA 1422	---	Known_LncRNA	4.71830784418696	4.71674290013641	4.13860653563578	2.00638816147278	2.71699925234103	2.57680697994178	4.52455242665305	2.43339813125186	-2.09115429540119	5.63909343075031e-05	0.0023067799766822
ENST00000397381	ENSG00000214049	UCA1	urothelial cancer associated 1 (non-protein coding)	---	Known_LncRNA	0.0	0.0	0.0	4.40042453860302	4.01187542758372	3.69140315438841	0.0	4.03456770685838	4.03456770685838	2.32860138208245e-06	0.0001304756599663
ENST00000641880	ENSG00000254166	CASC19	cancer susceptibility 19 (non-protein coding)	---	Known_LncRNA	4.77742302663324	3.82757938357454	4.48285889180004	2.32874112973407	1.76098820887993	2.31409968165243	4.36262043400261	2.13460967342214	-2.22801076058046	8.85781386275143e-05	0.0034427857913715
ENST00000657659	---	---	---	---	Known_LncRNA	6.54670497298698	5.91622311569044	5.63382954879832	4.81556308908992	4.33015796875095	4.74545919098334	6.03225254582525	4.63039341627474	-1.40185912955051	0.0002417134798573	0.0082393987547986
ENST00000624945	ENSG00000279159	AC003681.1	---	ENST00000401950,ENST00000487907,ENST00000333027,ENST00000480776,ENST00000323630,ENST00000491251,ENST00000445401,ENST00000495098,ENST00000351488,ENST00000492087,ENST00000406629,ENST00000415511	Known_LncRNA	0.0	0.0	6.93122128919943	0.0	0.0	0.0	2.31040709639981	0.0	-2.31040709639981	5.80601303744552e-08	4.30230445077265e-06
ENST00000650924	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	2.71699925234103	3.69140315438841	0.0	3.07435192667964	3.07435192667964	0.0004318977928795	0.0133806754066307
ENST00000632351	ENSG00000282508	LINC01002	long intergenic non-protein coding RNA 1002	---	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	3.16419738941065	2.31409968165243	0.0	2.76431681479085	2.76431681479085	0.001463070979364	0.0367560110998063
ENST00000655191	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	4.7630844416333	6.30470328988911	6.25712196675382	0.0	5.77496989942541	5.77496989942541	1.6126979042836501e-09	2.15466213938989e-07
ENST00000454741	ENSG00000235954	TTC28-AS1	TTC28 antisense RNA 1	ENST00000320996,ENST00000471825,ENST00000455418,ENST00000460566,ENST00000612946,ENST00000335272,ENST00000480563,ENST00000469670,ENST00000397906,ENST00000415296,ENST00000634017,ENST00000431039,ENST00000436663	Known_LncRNA	0.0	0.0	1.12873934084006	4.17796474586212	5.82655817071022	0.995112221966656	0.376246446946687	3.66654504617967	3.29029859923298	0.0013330135576803	0.0340957608459038
ENST00000626220	ENSG00000242086	LINC00969	long intergenic non-protein coding RNA 969	---	Known_LncRNA	5.91782296824791	5.45589711024699	5.85699660357162	4.25599207927317	2.71699925234103	4.07824852294057	5.74357222735551	3.68374661818492	-2.05982560917058	6.6980741576624e-05	0.0026892939293007
MSTRG.6410.7	---	---	---	ENST00000577021,ENST00000574453,ENST00000572330,ENST00000664602,ENST00000355280,ENST00000347992,ENST00000453408	Predicted_LncRNA	6.75223071303895	6.08932888173821	4.32097652720706	0.0	0.0	0.0	5.72084537399474	0.0	-5.72084537399474	5.29730886128186e-09	6.12612059525028e-07
MSTRG.6051.3	---	---	---	ENST00000563952,ENST00000330687,ENST00000394106	Predicted_LncRNA	5.69064162072963	1.67789467442482	7.36423325908347	0.0	2.31677426840082	0.0	4.91092318474597	0.77225808946694	-4.13866509527903	0.0010419761533267	0.0278586946220499
MSTRG.6051.1	---	---	---	ENST00000563952,ENST00000330687,ENST00000394106	Predicted_LncRNA	0.0	5.08721262689174	5.88623587729942	0.0	0.0	0.0	3.65781616806372	0.0	-3.65781616806372	0.0018799274929541	0.0449398865004948
ENST00000661111	---	---	---	ENST00000343253,ENST00000401026,ENST00000447456,ENST00000370267,ENST00000370272,ENST00000370276	Known_LncRNA	6.99571168326967	7.67570049638691	6.82952234345914	6.15813886850856	5.2938424990415	6.18016697628299	7.16697817437191	5.87738278127768	-1.28959539309422	0.0013506057218445	0.0344544919574981
ENST00000561606	ENSG00000259802	AC012640.2	---	ENST00000449913,ENST00000511802,ENST00000640713,ENST00000510872,ENST00000503788,ENST00000502795,ENST00000507863,ENST00000274140	Known_LncRNA	3.5862174472307	3.82757938357454	4.48285889180004	4.91511897203311	5.37914039937598	5.79773819444994	3.96555190753509	5.36399918861968	1.39844728108458	0.0016297875006017	0.0402030254258178
MSTRG.2264.1	---	---	---	---	Predicted_LncRNA	10.0753753348396	5.03976571802124	10.5053066024273	1.00426191569728	3.16419738941065	3.57598888645591	8.54014921842938	2.58148273052128	-5.9586664879081	1.03679709626923e-06	6.25393880797064e-05
ENST00000422183	ENSG00000234741	GAS5	growth arrest specific 5 (non-protein coding)	ENST00000427304,ENST00000367701,ENST00000367702,ENST00000367704	Known_LncRNA	9.64251586222969	9.47911865506631	9.35765105961129	8.28460830830348	8.11148087652102	8.21905926979906	9.49309519230243	8.20504948487452	-1.28804570742791	7.575276324791319e-22	4.398274016922461e-19
ENST00000582965	ENSG00000266402	SNHG25	small nucleolar RNA host gene 25	ENST00000615733,ENST00000584498,ENST00000583097,ENST00000583501,ENST00000584379,ENST00000258991	Known_LncRNA	3.71275942870688	3.5847261882988	4.13860653563578	5.21773526826523	5.35126438180094	5.38275917186821	3.81203071754715	5.31725294064479	1.50522222309764	2.9849165103874e-05	0.0013135867143404
ENST00000326677	ENSG00000177410	ZFAS1	ZNFX1 antisense RNA 1	ENST00000396105,ENST00000371752,ENST00000371744,ENST00000371754	Known_LncRNA	6.38505688364966	5.6261865584334	6.41369531341482	4.46755710793494	1.37454877652998	3.79826439941518	6.14164625183263	3.21345676129337	-2.92818949053926	0.0011496982006736	0.0301559062533258
ENST00000603791	ENSG00000270504	AL391422.3	---	ENST00000477592,ENST00000380283,ENST00000485986	Known_LncRNA	4.77742302663324	5.56046261946977	5.88623587729942	4.17796474586212	4.01187542758372	4.23865237933607	5.40804050780081	4.1428308509273	-1.26520965687351	0.001898861143647	0.0453157173604314
ENST00000650326	---	---	---	ENST00000525066,ENST00000267868,ENST00000532743,ENST00000645673,ENST00000527860,ENST00000382643,ENST00000423169,ENST00000526763,ENST00000557850	Known_LncRNA	3.44749966808851	2.43274935370114	2.18904249439723	0.0	0.0	0.0	2.68976383872896	0.0	-2.68976383872896	0.0017948015492773	0.0434795606085917
ENST00000617703	ENSG00000277496	AL357033.4	---	ENST00000217159,ENST00000497209	Known_LncRNA	4.83421098026118	5.22085284013498	4.93861019859795	3.3295905012907	3.28699557481754	1.99266210906196	4.9978913396647	2.86974939505673	-2.12814194460797	2.93131975770688e-05	0.0012932271481405
ENST00000608819	ENSG00000272941	AC083862.2	---	ENST00000275767,ENST00000430372,ENST00000483029,ENST00000477820,ENST00000481410,ENST00000487774,ENST00000459937,ENST00000620897,ENST00000472428,ENST00000617987,ENST00000393114,ENST00000424142,ENST00000488161,ENST00000486115	Known_LncRNA	4.99228080898115	4.887276183572	4.76058650505118	4.00798079185999	3.28699557481754	3.57598888645591	4.88004783253478	3.62365508437781	-1.25639274815696	0.0019084010847726	0.0454972105860762
ENST00000442956	ENSG00000236790	LINC00299	long intergenic non-protein coding RNA 299	---	Known_LncRNA	4.03690945105859	5.6261865584334	6.33104731846763	3.70829806237132	3.50508327311319	3.45053239567983	5.33138110931987	3.55463791038811	-1.77674319893176	0.0018072043508852	0.0436593348594779
MSTRG.8083.1	---	---	---	ENST00000360315,ENST00000494516,ENST00000432704,ENST00000609040,ENST00000417582,ENST00000448576,ENST00000457895,ENST00000404158	Predicted_LncRNA	3.71275942870688	9.0011509001674	8.73814838732874	4.65202797918751	3.50508327311319	5.38275917186821	7.15068623873434	4.51329014138964	-2.6373960973447	0.0008508073348068	0.0235936920121737
MSTRG.6289.2	---	---	---	ENST00000268720,ENST00000319518,ENST00000525982	Predicted_LncRNA	0.0	0.0	0.0	3.00745011039008	2.71699925234103	3.3131181364361	0.0	3.0125224997224	3.0125224997224	0.0004072918206832	0.012749941956191
MSTRG.7067.30	---	---	---	ENST00000577830,ENST00000577840	Predicted_LncRNA	2.10538738708104	0.0	0.0	2.81465337330948	6.82396834387172	5.07795962506608	0.70179579569368	4.90552711408243	4.20373131838875	0.0003411152860574	0.0110181486903109
ENST00000499732	ENSG00000245532	NEAT1	nuclear paraspeckle assembly transcript 1 (non-protein coding)	---	Known_LncRNA	2.70159816905037	5.52644264087352	4.55746157091411	2.32874112973407	1.76098820887993	0.995112221966656	4.261834126946	1.69494718686022	-2.56688694008578	0.0011589486849503	0.030364670763654
ENST00000561521	ENSG00000261824	LINC00662	long intergenic non-protein coding RNA 662	---	Known_LncRNA	7.13783777160657	6.20137956686956	6.17393788357921	5.21773526826523	4.76989455500016	3.89775330696248	6.50438507401845	4.62846104340929	-1.87592403060916	0.0002296965660043	0.0078811841207264
ENST00000620192	ENSG00000260337	AC091544.5	---	---	Known_LncRNA	5.83676385498773	5.88970675009162	6.2205988809643	3.81525991422938	5.20318277337143	4.16067858622542	5.98235649534788	4.39304042460874	-1.58931607073914	0.0017756353882972	0.0431486127564725
ENST00000670582	---	---	---	ENST00000495709,ENST00000318602,ENST00000495442,ENST00000543436	Known_LncRNA	0.0	0.0	1.75418269748789	4.25599207927317	4.63766938494289	3.57598888645591	0.584727565829297	4.15655011689066	3.57182255106136	0.0001635833242505	0.0058891666373729
ENST00000337335	ENSG00000162913	OBSCN-AS1	OBSCN antisense RNA 1	ENST00000366704,ENST00000366707,ENST00000636875,ENST00000668066,ENST00000284548,ENST00000493977,ENST00000570156,ENST00000662438,ENST00000636476,ENST00000422127	Known_LncRNA	7.06852420162829	6.83642605168186	7.115349515372	5.81571465263205	5.40648798575404	6.19979396434095	7.00676658956072	5.80733220090901	-1.1994343886517	5.22834507395276e-05	0.0021556304786494
ENST00000592016	ENSG00000267259	AC061975.7	---	---	Known_LncRNA	5.75087781226197	6.01766808941111	4.69600449005581	3.59276642044652	4.01187542758372	4.16067858622542	5.48818346390963	3.92177347808522	-1.56640998582441	0.0007703953112508	0.0217735444058004
MSTRG.15265.11	---	---	---	---	Predicted_LncRNA	9.71612802396963	10.6704871161747	0.0	0.0	0.0	0.0	6.79553838004811	0.0	-6.79553838004811	0.0017548610105501	0.0427468629586491
ENST00000656903	---	---	---	ENST00000512429,ENST00000509387,ENST00000296595,ENST00000503755,ENST00000510089,ENST00000514135,ENST00000506536,ENST00000513487,ENST00000511087,ENST00000507872,ENST00000503194,ENST00000515477	Known_LncRNA	1.67901321732037	3.12078723788762	0.0	6.13767305831721	5.43332680317784	5.48227925186498	1.59993348506933	5.68442637112001	4.08449288605068	5.28945864612368e-07	3.34354454061065e-05
ENST00000644103	---	---	---	---	Known_LncRNA	4.65666650725945	5.1331486734175	5.04615255091946	5.91526042985299	6.01602202278407	6.44975109556578	4.9453225771988	6.12701118273428	1.18168860553548	0.0001593465089324	0.0057513124206351
ENST00000612269	ENSG00000274104	AC020910.4	---	ENST00000593781,ENST00000392232,ENST00000459757,ENST00000448715,ENST00000599244,ENST00000595708,ENST00000492450	Known_LncRNA	4.71830784418696	4.29987901454637	4.82240096330429	3.17749305791873	3.16419738941065	3.45053239567983	4.61352927401254	3.26407428100307	-1.34945499300947	0.0015944539553614	0.0395079591945978
ENST00000590740	ENSG00000267002	AC060780.1	---	ENST00000586650,ENST00000589872,ENST00000590996,ENST00000542611,ENST00000634433,ENST00000592304,ENST00000341165	Known_LncRNA	5.34474309766003	4.9907051706422	4.88167534800548	8.5123136379825	8.15647217284511	8.47807523066399	5.07237453876924	8.38228701383053	3.3099124750613	5.80246429044166e-40	1.15303955184483e-36
ENST00000665563	---	---	---	---	Known_LncRNA	4.3798148151432	4.9907051706422	4.40418708754308	3.00745011039008	3.02996628376523	2.31409968165243	4.59156902444283	2.78383869193591	-1.80773033250691	0.0002841789277752	0.0094628833046856
MSTRG.6567.3	---	---	---	ENST00000537091,ENST00000542206,ENST00000579586,ENST00000379504,ENST00000540946,ENST00000318094,ENST00000535933,ENST00000581396,ENST00000395739	Predicted_LncRNA	0.0	0.0	0.0	7.58589567507043	7.59201292630043	8.16016694536373	0.0	7.7793585155782	7.7793585155782	1.60537727799389e-16	5.748717497401081e-14
ENST00000455838	ENSG00000234741	GAS5	growth arrest specific 5 (non-protein coding)	ENST00000427304,ENST00000367701,ENST00000367702,ENST00000367704	Known_LncRNA	5.80869946584578	6.28514772695786	6.12571714530491	3.46717121584615	3.69449135858247	4.23865237933607	6.07318811270285	3.80010498458823	-2.27308312811462	8.42520462694669e-10	1.19707479396441e-07
ENST00000415067	ENSG00000204261	PSMB8-AS1	PSMB8 antisense RNA 1 (head to head)	ENST00000414474,ENST00000650411,ENST00000374881,ENST00000395330,ENST00000374882,ENST00000354258,ENST00000650793,ENST00000486332,ENST00000645078,ENST00000484003,ENST00000643923,ENST00000487296,ENST00000643049,ENST00000490613,ENST00000395339	Known_LncRNA	0.0	0.0	0.0	2.00638816147278	3.28699557481754	2.99143549046612	0.0	2.76160640891881	2.76160640891881	0.001914675319413	0.0456005589914489
ENST00000523825	ENSG00000246228	CASC8	cancer susceptibility 8 (non-protein coding)	ENST00000465342,ENST00000645438	Known_LncRNA	0.0	0.0	0.0	1.59064226172992	4.33015796875095	4.45008599028347	0.0	3.45696207358811	3.45696207358811	0.0004433489333702	0.0136664221785757
ENST00000609998	ENSG00000273151	AC073957.3	---	ENST00000483469,ENST00000457861,ENST00000265857,ENST00000441491,ENST00000407192,ENST00000412734,ENST00000426056	Known_LncRNA	5.86429271546341	6.59518885348507	6.15002897172384	4.7630844416333	5.07269727564202	5.03489965850527	6.20317018022411	4.95689379192686	-1.24627638829724	0.0001241337609428	0.0046283784524074
MSTRG.14427.1	---	---	---	ENST00000621097,ENST00000485545,ENST00000488266,ENST00000055077,ENST00000398475,ENST00000344995,ENST00000490586,ENST00000352131,ENST00000460943,ENST00000497430,ENST00000275635	Predicted_LncRNA	5.0413430661411	5.1331486734175	5.1937825453649	6.05277681271698	6.50774776719163	5.89726217237699	5.1227580949745	6.1525955840952	1.0298374891207	0.0005117658594076	0.015497750927691
MSTRG.7162.1	---	---	---	---	Predicted_LncRNA	5.13472911959839	4.59071414195232	4.40418708754308	6.6949294125304	6.38937987825461	6.57527267390879	4.70987678303126	6.55319398823127	1.8433172052	3.9508996186866804e-09	4.76024359864445e-07
ENST00000568395	ENSG00000260565	ERVK13-1	endogenous retrovirus group K13 member 1	---	Known_LncRNA	0.0	0.0	0.0	7.57832222151379	7.99470671325821	7.1800996831901	0.0	7.58437620598737	7.58437620598737	1.18033431368119e-15	3.80207780019752e-13
ENST00000419080	ENSG00000226416	MRPL23-AS1	MRPL23 antisense RNA 1	ENST00000397297	Known_LncRNA	6.45914467173164	6.20137956686956	6.0241532806494	5.43457866541976	5.10644164880213	4.84852759304919	6.2282258397502	5.12984930242369	-1.09837653732651	0.0003113870924175	0.0102431760538615
ENST00000614771	ENSG00000278709	NKILA	NF-kappaB interacting lncRNA	ENST00000395816,ENST00000347215,ENST00000472841,ENST00000265626,ENST00000341744,ENST00000395819	Known_LncRNA	5.96943787203072	6.20137956686956	5.7966778719212	4.70862456629207	4.63766938494289	4.89742590248355	5.98916510360716	4.74790661790617	-1.24125848570099	1.99922733709458e-05	0.0009136450013586
ENST00000627721	ENSG00000281849	AL732314.6	---	ENST00000390665,ENST00000445792	Known_LncRNA	0.0	0.0	0.0	2.59205871498577	2.71699925234103	3.45053239567983	0.0	2.91986345433554	2.91986345433554	0.0007699879612375	0.0217702643602141
MSTRG.5059.1	---	---	---	ENST00000525066,ENST00000267868,ENST00000532743,ENST00000645673,ENST00000527860,ENST00000382643,ENST00000423169,ENST00000531277,ENST00000533741,ENST00000557850	Predicted_LncRNA	5.62778041590501	5.49160102836946	5.56316900091118	6.73635167184815	6.48227030603344	6.48217009226646	5.56085014839522	6.56693069004935	1.00608054165413	1.49137740552278e-05	0.000704201657933
ENST00000629214	ENSG00000281920	AC007389.5	---	---	Known_LncRNA	2.43407496918014	3.44602208564702	3.02148946514895	0.0	0.0	0.0	2.9671955066587	0.0	-2.9671955066587	0.0003975138272143	0.0124993159915359
ENST00000661699	---	---	---	ENST00000398531	Known_LncRNA	2.43407496918014	3.44602208564702	2.52273454149949	0.0	0.0	0.0	2.80094386544222	0.0	-2.80094386544222	0.0009649028896761	0.0262102847321194
MSTRG.7862.1	---	---	---	ENST00000440014,ENST00000293683,ENST00000380702,ENST00000592685	Predicted_LncRNA	4.21852612670637	4.12903995217031	3.54597852369756	5.53188873938979	5.17165105766148	5.41670106419878	3.96451486752475	5.37341362041668	1.40889875289194	0.0001546014811155	0.0056087461475004
MSTRG.2691.3	---	---	---	ENST00000534219,ENST00000613246,ENST00000440289,ENST00000418331,ENST00000615445,ENST00000527952	Predicted_LncRNA	0.0	0.0	0.0	2.00638816147278	8.36600411897953	8.04552720099758	0.0	6.13930649381663	6.13930649381663	2.49614221978917e-07	1.66907921092708e-05
MSTRG.10203.3	---	---	---	ENST00000252996,ENST00000608887	Predicted_LncRNA	0.0	5.71947815167845	7.3220593504555	0.0	0.0	1.57844177650516	4.34717916737798	0.526147258835053	-3.82103190854293	0.0019790935378393	0.0468186366644326
ENST00000671343	---	---	---	---	Known_LncRNA	5.08879157415838	6.17965484886358	0.0	0.0	0.0	0.0	3.75614880767399	0.0	-3.75614880767399	0.0013991209674149	0.035426988343619
ENST00000439423	ENSG00000231010	AL121672.1	---	---	Known_LncRNA	5.80869946584578	5.34315637524875	5.52649706222781	4.46755710793494	4.08139760167818	4.5141969156392	5.55945096777411	4.35438387508411	-1.20506709269001	0.0003551776801175	0.0113837593213132
ENST00000414790	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	8.13270663764049	9.29183413352121	8.79321335951051	9.77833940103507	10.6640380188515	10.275617919899	8.73925137689074	10.2393317799285	1.50008040303779	3.50026878233313e-05	0.0015065464367352
ENST00000608615	ENSG00000272733	AP000345.2	---	ENST00000330377,ENST00000438703,ENST00000249053	Known_LncRNA	2.70159816905037	2.92577554459484	3.92980137441401	0.0	0.0	0.0	3.18572502935307	0.0	-3.18572502935307	0.0001851222062966	0.0065461447149752
ENST00000537024	ENSG00000255717	SNHG1	small nucleolar RNA host gene 1	ENST00000377891,ENST00000377890,ENST00000377889,ENST00000535296	Known_LncRNA	5.96943787203072	6.22278199201834	5.7966778719212	3.91483601477628	3.40015646062512	3.89775330696248	5.99629924532342	3.73758192745463	-2.25871731786879	2.09433723172836e-10	3.3731261569645e-08
MSTRG.6199.1	---	---	---	ENST00000569332,ENST00000406884,ENST00000402655,ENST00000539474,ENST00000566780,ENST00000408984	Predicted_LncRNA	8.41456975381844	8.4722307000187	8.47498783744389	9.46588008577944	9.38287314039211	9.53904285460686	8.45392943042701	9.4625986935928	1.00866926316579	1.61198200146594e-24	1.17840060426335e-21
MSTRG.15273.3	---	---	---	ENST00000518998,ENST00000517506,ENST00000463267,ENST00000481490,ENST00000523839,ENST00000336148	Predicted_LncRNA	5.5620549426031	5.83516555842115	6.17393788357921	6.89108240863726	7.51243988453528	7.330118480793	5.85705279486782	7.24454692465518	1.38749412978736	2.11553720278146e-06	0.0001194863542297
ENST00000607033	ENSG00000227954	TARID	TCF21 antisense RNA inducing promoter demethylation	ENST00000430974,ENST00000431403,ENST00000531901,ENST00000531861,ENST00000367882,ENST00000452339,ENST00000525849,ENST00000355167,ENST00000237316,ENST00000532518,ENST00000355286	Known_LncRNA	5.17924897099722	4.59071414195232	4.76058650505118	3.3295905012907	3.50508327311319	2.31409968165243	4.84351653933357	3.04959115201877	-1.7939253873148	0.0004276680501524	0.013268277141558
ENST00000663185	---	---	---	ENST00000355540,ENST00000628380,ENST00000360902,ENST00000456197,ENST00000359863,ENST00000446306	Known_LncRNA	0.0	0.0	0.0	4.59312014303419	5.13941475273376	4.16067858622542	0.0	4.63107116066446	4.63107116066446	1.4510602235085e-07	1.00684569701296e-05
ENST00000517927	ENSG00000253522	MIR3142HG	MIR3142 host gene	---	Known_LncRNA	3.29401109549286	3.5847261882988	4.13860653563578	4.91511897203311	5.32283910846816	5.16040573367975	3.67244793980915	5.13278793806034	1.46033999825119	0.0003281652146729	0.0106953508449482
ENST00000524166	ENSG00000251136	AF117829.1	---	---	Known_LncRNA	3.44749966808851	3.44602208564702	3.2182744478381	0.0	0.0	0.0	3.37059873385788	0.0	-3.37059873385788	3.13124917673718e-05	0.0013668987742806
ENST00000610335	ENSG00000275294	LINC02340	long intergenic non-protein coding RNA 2340	---	Known_LncRNA	2.43407496918014	3.71125679016723	4.13860653563578	0.0	0.845135942920661	0.0	3.42797943166105	0.281711980973554	-3.1462674506875	0.0005854179518725	0.0173702309135211
MSTRG.1912.1	---	---	---	ENST00000615923,ENST00000622861,ENST00000623662	Predicted_LncRNA	8.05121236437909	8.4722307000187	8.67253071085957	7.16832326955021	7.25850852732897	7.12982886304245	8.39865792508579	7.18555355330721	-1.21310437177858	2.65084297040981e-08	2.23551783029993e-06
ENST00000657356	---	---	---	---	Known_LncRNA	4.59227344152675	2.92577554459484	4.40418708754308	0.0	1.76098820887993	0.995112221966656	3.97407869122156	0.918700143615529	-3.05537854760603	0.0004227714819238	0.0131528076828392
MSTRG.5073.3	---	---	---	ENST00000617768,ENST00000487220	Predicted_LncRNA	8.60610399805464	8.93785205455735	8.70571257564056	7.10648141660689	7.26599312596381	7.02370583132264	8.74988954275085	7.13206012463111	-1.61782941811974	2.53768090892319e-21	1.4264395381599799e-18
ENST00000570210	ENSG00000261114	AC012181.2	---	ENST00000567944,ENST00000563343,ENST00000563781,ENST00000565966,ENST00000300302,ENST00000568651,ENST00000564678,ENST00000569429,ENST00000570273,ENST00000563911,ENST00000379792,ENST00000568358,ENST00000568814,ENST00000344114,ENST00000439977	Known_LncRNA	8.37683877082114	6.77979212472441	6.63653894809498	5.50017577950862	4.72715199662699	5.57537501175833	7.26438994788018	5.26756759596465	-1.99682235191553	0.0002388778684336	0.0081565345357138
ENST00000610269	ENSG00000272854	AC004839.1	---	ENST00000265720,ENST00000421217,ENST00000482371,ENST00000457837,ENST00000485825,ENST00000486326,ENST00000473124,ENST00000422290,ENST00000471763,ENST00000379117,ENST00000465919,ENST00000431839,ENST00000379119,ENST00000005259,ENST00000445771,ENST00000436411,ENST00000443233,ENST00000442065,ENST00000494086,ENST00000466094,ENST00000479917	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	3.40015646062512	3.3131181364361	0.0	3.17597599012357	3.17597599012357	0.0001800413136914	0.0063855376737316
ENST00000663976	---	---	---	ENST00000628403,ENST00000262461,ENST00000509205,ENST00000343225	Known_LncRNA	0.0	0.0	0.0	7.67380539073048	8.27990225244639	7.69069478332584	0.0	7.8814674755009	7.8814674755009	8.675157856777699e-17	3.2465800310266603e-14
ENST00000522673	ENSG00000170919	TPT1-AS1	TPT1 antisense RNA 1	ENST00000519676,ENST00000539591,ENST00000523988	Known_LncRNA	3.29401109549286	3.12078723788762	2.52273454149949	0.0	0.0	0.995112221966656	2.97917762495999	0.331704073988885	-2.6474735509711	0.0020716387411764	0.0485163448802301
ENST00000652851	---	---	---	ENST00000510314,ENST00000509551,ENST00000417226,ENST00000314797,ENST00000515725,ENST00000512034,ENST00000383463,ENST00000511665,ENST00000514478,ENST00000509889,ENST00000509042,ENST00000389735,ENST00000502878	Known_LncRNA	0.0	0.0	0.0	2.00638816147278	3.50508327311319	2.99143549046612	0.0	2.8343023083507	2.8343023083507	0.0016082337010729	0.0397446972178983
ENST00000663050	---	---	---	---	Known_LncRNA	5.30511508496122	4.37826622111899	5.1937825453649	3.3295905012907	2.88195275838941	3.45053239567983	4.95905461714837	3.22069188511998	-1.73836273202839	0.000195612937341	0.0068473111982533
ENST00000378947	ENSG00000197536	C5orf56	chromosome 5 open reading frame 56	ENST00000638504,ENST00000640655,ENST00000638568,ENST00000638452,ENST00000639899	Known_LncRNA	4.52487144070318	4.83264126317416	4.62839543740196	3.17749305791873	3.28699557481754	3.45053239567983	4.66196938042643	3.30500700947203	-1.3569623709544	0.0009986026895362	0.0269286804780749
ENST00000436715	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	4.3798148151432	3.82757938357454	3.39141118207998	6.21784996060348	6.52031973937131	6.29411294404663	3.86626846026591	6.34409421467381	2.4778257544079	1.2380594072268898e-11	2.3771927842423e-09
MSTRG.2447.12	---	---	---	ENST00000382171	Predicted_LncRNA	1.07110657384614	7.87134056917942	8.1163203668537	0.0	0.0	0.0	5.68625583662642	0.0	-5.68625583662642	0.0003183354713267	0.0104279811884245
ENST00000461832	ENSG00000197989	SNHG12	small nucleolar RNA host gene 12	ENST00000491577,ENST00000373830,ENST00000480930,ENST00000484775	Known_LncRNA	3.12222709162065	3.93521880141907	3.02148946514895	5.93910949067246	4.68310434523033	5.87301740137168	3.35964511939622	5.49841041242482	2.1387652930286	9.13326481600236e-05	0.0035342678726279
ENST00000661422	---	---	---	---	Known_LncRNA	5.2224360189182	4.93991735122516	4.76058650505118	1.59064226172992	3.50508327311319	2.99143549046612	4.97431329173151	2.69572034176974	-2.27859294996177	0.000156991816378	0.0056788477203076
ENST00000606998	ENSG00000237499	AL357060.2	---	ENST00000615468,ENST00000619035,ENST00000621150,ENST00000620204,ENST00000614035,ENST00000433680,ENST00000612899,ENST00000237289,ENST00000421450,ENST00000420009	Known_LncRNA	0.0	0.0	2.18904249439723	4.33001499962063	3.50508327311319	4.23865237933607	0.729680831465743	4.02458355068996	3.29490271922422	0.000574021112266	0.0170931808120277
ENST00000647108	---	---	---	ENST00000612472,ENST00000331343,ENST00000451615,ENST00000493524,ENST00000468360,ENST00000334538,ENST00000493811,ENST00000349485,ENST00000476653	Known_LncRNA	0.0	5.71947815167845	5.66790301218609	0.0	0.0	0.0	3.79579372128818	0.0	-3.79579372128818	0.0013928428019265	0.0353187284755956
MSTRG.1865.1	---	---	---	ENST00000340077,ENST00000374773,ENST00000374776,ENST00000374794,ENST00000545260,ENST00000350537,ENST00000374790,ENST00000374788,ENST00000346874,ENST00000545693,ENST00000374789	Predicted_LncRNA	7.08031019902564	8.57981296717942	6.7201070188722	0.0	0.0	0.0	7.46007672835909	0.0	-7.46007672835909	1.0855678819456e-13	2.74974149601331e-11
MSTRG.11203.35	---	---	---	ENST00000422955,ENST00000441115,ENST00000419610,ENST00000464013,ENST00000443081,ENST00000483350,ENST00000442092,ENST00000454079,ENST00000425608,ENST00000266022,ENST00000434592	Predicted_LncRNA	9.51588392406117	0.0	8.41104178866527	1.00426191569728	0.845135942920661	0.0	5.97564190424215	0.616465952872647	-5.3591759513695	0.0003910078272436	0.0123332243081047
MSTRG.11203.34	---	---	---	ENST00000422955,ENST00000441115,ENST00000419610,ENST00000464013,ENST00000443081,ENST00000483350,ENST00000442092,ENST00000454079,ENST00000425608,ENST00000266022,ENST00000434592	Predicted_LncRNA	0.0	0.0	9.5388854712873	0.0	0.0	0.0	3.1796284904291	0.0	-3.1796284904291	4.21210652622432e-09	5.01556809127162e-07
MSTRG.11203.37	---	---	---	ENST00000422955,ENST00000441115,ENST00000419610,ENST00000464013,ENST00000443081,ENST00000483350,ENST00000442092,ENST00000454079,ENST00000425608,ENST00000266022,ENST00000434592	Predicted_LncRNA	0.0	0.0	0.0	1.00426191569728	6.30470328988911	3.9908217898572	0.0	3.76659566514786	3.76659566514786	0.0004022526015398	0.0126142658074308
MSTRG.11203.33	---	---	---	ENST00000422955,ENST00000441115,ENST00000419610,ENST00000464013,ENST00000443081,ENST00000483350,ENST00000442092,ENST00000454079,ENST00000425608,ENST00000266022,ENST00000434592	Predicted_LncRNA	5.08879157415838	6.90422845269997	4.13860653563578	8.77004295700283	7.65036920866651	8.88201221636722	5.37720885416471	8.43414146067885	3.05693260651414	0.0002300260754639	0.0078886531198498
ENST00000357591	ENSG00000196810	CTBP1-AS2	CTBP1 antisense RNA 2 (head to head)	ENST00000290921,ENST00000515399,ENST00000514495,ENST00000506180,ENST00000513420,ENST00000382952,ENST00000514210	Known_LncRNA	1.67901321732037	1.67789467442482	2.52273454149949	3.70829806237132	5.10644164880213	5.57537501175833	1.95988081108156	4.79670490764393	2.83682409656237	4.9950185960615e-05	0.0020697127274041
ENST00000668933	---	---	---	---	Known_LncRNA	8.07496993983721	7.81608705182966	7.27861536247111	6.65228260326375	6.45633482169115	5.74527727208364	7.72322411804599	6.28463156567951	-1.43859255236648	8.81723977698146e-05	0.0034289049769976
ENST00000652072	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	3.16419738941065	3.45053239567983	0.0	3.14312771946665	3.14312771946665	0.0002141786468647	0.0074009397327594
ENST00000375642	ENSG00000204387	C6orf48	chromosome 6 open reading frame 48	---	Known_LncRNA	7.59755166310262	7.31625163925527	8.77769379716284	5.78971668854045	5.7215971633188	6.07781515443165	7.89716569984024	5.86304300209697	-2.03412269774328	2.59341378108555e-06	0.0001437719306663
ENST00000439892	ENSG00000179818	PCBP1-AS1	PCBP1 antisense RNA 1	ENST00000303577	Known_LncRNA	2.92718834245759	5.1331486734175	3.2182744478381	0.0	0.0	0.0	3.75953715457106	0.0	-3.75953715457106	5.25964566128569e-05	0.0021672689458512
ENST00000672226	---	---	---	ENST00000621615,ENST00000585527	Known_LncRNA	4.99228080898115	4.71674290013641	4.82240096330429	3.3295905012907	3.28699557481754	2.57680697994178	4.84380822414062	3.06446435201667	-1.77934387212394	6.16144912518038e-05	0.002496572470343
ENST00000657086	---	---	---	ENST00000492434,ENST00000475075,ENST00000466926,ENST00000372310,ENST00000372306,ENST00000489764	Known_LncRNA	4.71830784418696	4.77585560025398	4.69600449005581	3.3295905012907	2.71699925234103	3.3131181364361	4.73005597816558	3.11990263002261	-1.61015334814297	0.0001872035128374	0.0066039834954491
MSTRG.11959.9	---	---	---	ENST00000261426,ENST00000504108,ENST00000381930,ENST00000508137,ENST00000514399,ENST00000261425	Predicted_LncRNA	9.29345831529942	9.23766957633306	8.90099861271027	7.66668074934037	7.86271358302547	7.84199940340845	9.14404216811425	7.79046457859143	-1.35357758952282	1.05892161938725e-15	3.43450881462317e-13
MSTRG.7549.1	---	---	---	ENST00000285039	Predicted_LncRNA	3.5862174472307	3.82757938357454	3.39141118207998	2.00638816147278	0.845135942920661	1.57844177650516	3.60173600429507	1.47665529363287	-2.12508071066221	0.0016081965689603	0.0397446972178983
ENST00000668186	---	---	---	---	Known_LncRNA	4.59227344152675	5.03976571802124	3.92980137441401	2.00638816147278	2.06548133965422	0.0	4.52061351132067	1.357289833709	-3.16332367761167	3.19280987075737e-05	0.0013911725646193
ENST00000618589	ENSG00000276216	AC245014.3	---	---	Known_LncRNA	4.99228080898115	5.17766711699729	5.23981616391923	6.27518760401755	6.52031973937131	6.21915751901314	5.13658802996589	6.33822162080067	1.20163359083478	3.45532335267683e-06	0.0001873576714767
ENST00000605901	ENSG00000244041	LINC01011	long intergenic non-protein coding RNA 1011	ENST00000426637,ENST00000380472	Known_LncRNA	4.30142324300914	3.29255025989492	4.23267127147316	0.0	1.76098820887993	0.0	3.94221492479241	0.586996069626643	-3.35521885516576	0.0003265187422465	0.0106539954454402
ENST00000623760	ENSG00000279712	FP325330.3	---	---	Known_LncRNA	2.10538738708104	0.0	0.0	4.09547484358913	4.59075687759825	4.07824852294057	0.70179579569368	4.25482674804265	3.55303095234897	8.23148138980539e-05	0.003226009017569
MSTRG.10139.6	---	---	---	ENST00000371998,ENST00000371997,ENST00000372004	Predicted_LncRNA	4.94149115725665	5.88970675009162	0.0	0.0	0.0	0.0	3.61039930244942	0.0	-3.61039930244942	0.0019468425276436	0.0462106525134892
MSTRG.7531.5	---	---	---	ENST00000256413,ENST00000591387,ENST00000591412,ENST00000588345,ENST00000587752,ENST00000382998	Predicted_LncRNA	10.3914294075867	10.1650263155566	0.0	0.0	0.0	0.0	6.85215190771443	0.0	-6.85215190771443	0.0017359184493623	0.0423952331977899
ENST00000651492	---	---	---	---	Known_LncRNA	5.2224360189182	4.45261293999394	4.55746157091411	3.46717121584615	2.06548133965422	2.57680697994178	4.74417017660875	2.70315317848072	-2.04101699812803	0.0004476941221737	0.0137732813583201
ENST00000586962	ENSG00000267698	AC002116.2	---	ENST00000360535,ENST00000490986,ENST00000378875,ENST00000470859,ENST00000585466,ENST00000607730,ENST00000392183,ENST00000522483,ENST00000495116,ENST00000252984,ENST00000466196,ENST00000590559,ENST00000471323,ENST00000475223,ENST00000497999,ENST00000468004,ENST00000485128,ENST00000486389,ENST00000462793,ENST00000490483,ENST00000524106,ENST00000461668,ENST00000481257,ENST00000592017,ENST00000586457,ENST00000590666,ENST00000593074,ENST00000292894,ENST00000592353	Known_LncRNA	4.21852612670637	4.21698678017245	3.92980137441401	5.81571465263205	5.67737695663325	5.71831365712778	4.12177142709761	5.73713508879769	1.61536366170008	4.27008092185793e-07	2.74593061578438e-05
ENST00000447898	ENSG00000206195	DUXAP8	double homeobox A pseudogene 8	---	Known_LncRNA	3.44749966808851	3.29255025989492	4.03797827953576	0.0	1.37454877652998	0.995112221966656	3.59267606917306	0.789886999498879	-2.80278906967418	0.0005822454268341	0.0172942826907739
ENST00000383808	ENSG00000206567	AC022007.1	---	ENST00000470827	Known_LncRNA	5.45748684352664	5.26278332259974	5.23981616391923	7.36601153663533	5.82655817071022	6.92102570010646	5.32002877668187	6.704531802484	1.38450302580213	0.0011661934829926	0.0305318066670015
MSTRG.3568.2	---	---	---	ENST00000551094,ENST00000553027,ENST00000547861,ENST00000546847,ENST00000537495,ENST00000552878,ENST00000320516,ENST00000444214,ENST00000552188,ENST00000398092,ENST00000551694,ENST00000550765,ENST00000266984,ENST00000552942,ENST00000256680	Predicted_LncRNA	0.0	0.0	1.12873934084006	5.43457866541976	4.08139760167818	3.45053239567983	0.376246446946687	4.32216955425926	3.94592310731257	5.97921080240609e-05	0.0024311092037172
ENST00000653404	---	---	---	---	Known_LncRNA	6.04355477469541	5.88970675009162	5.94299452306412	4.40042453860302	4.49209149645931	5.27586196030474	5.95875201595038	4.72279266512236	-1.23595935082803	0.0007252961583219	0.0207693493779837
MSTRG.1714.1	---	---	---	ENST00000472531,ENST00000491356,ENST00000476312	Predicted_LncRNA	7.36680826903728	5.45589711024699	6.5478309432732	8.83504107324856	8.64390466534465	8.46191071961045	6.45684544085249	8.64695215273455	2.19010671188206	2.95024295122106e-05	0.0013007621171933
MSTRG.7876.4	---	---	---	ENST00000270502,ENST00000593162,ENST00000588347,ENST00000253031,ENST00000586748,ENST00000588962,ENST00000587943,ENST00000586575,ENST00000588807,ENST00000592505,ENST00000590329,ENST00000585858	Predicted_LncRNA	0.0	0.0	0.0	3.70829806237132	5.17165105766148	4.89742590248355	0.0	4.59245834083878	4.59245834083878	4.61779017847041e-07	2.94669733469034e-05
ENST00000461448	ENSG00000197989	SNHG12	small nucleolar RNA host gene 12	ENST00000491577,ENST00000373830,ENST00000480930,ENST00000484775	Known_LncRNA	6.49480899250733	6.95626564189028	7.34330040657126	7.70195723887543	8.44395978039545	8.11436435624824	6.93145834698962	8.08676045850637	1.15530211151675	0.0003511802712402	0.0112710013896133
ENST00000666232	---	---	---	---	Known_LncRNA	3.29401109549286	2.43274935370114	3.2182744478381	0.0	0.0	0.0	2.9816782990107	0.0	-2.9816782990107	0.000349106093646	0.0112223013306744
MSTRG.14985.20	---	---	---	---	Predicted_LncRNA	9.83741783642341	10.7417148684954	10.3407958769291	9.34388849626462	8.91064186060314	9.0208937509696	10.306642860616	9.09180803594579	-1.21483482467018	3.86782030134683e-06	0.000207491646645
ENST00000429289	ENSG00000229153	EPHA1-AS1	EPHA1 antisense RNA 1	ENST00000488068,ENST00000497891,ENST00000275815,ENST00000332690,ENST00000408916	Known_LncRNA	6.04355477469541	6.40233100846156	6.33104731846763	3.17749305791873	4.76989455500016	4.94472105458994	6.25897770054153	4.29736955583628	-1.96160814470526	0.000331569560022	0.0107913462709082
ENST00000416970	ENSG00000233016	SNHG7	small nucleolar RNA host gene 7	ENST00000371691,ENST00000371692	Known_LncRNA	6.15920198318479	6.52800373875262	5.1937825453649	4.46755710793494	4.33015796875095	4.07824852294057	5.9603294224341	4.29198786654215	-1.66834155589195	0.0001490551571645	0.005437302661616
MSTRG.14349.4	---	---	---	ENST00000360415,ENST00000395326	Predicted_LncRNA	0.0	0.0	0.0	0.0	6.05110209463764	5.51398336569456	0.0	3.8550284867774	3.8550284867774	0.0018757343694658	0.0448676717409561
MSTRG.10827.16	---	---	---	ENST00000389774,ENST00000361473,ENST00000356099,ENST00000412433,ENST00000396119,ENST00000336963,ENST00000460809,ENST00000447333,ENST00000469872,ENST00000515632,ENST00000495250,ENST00000352766	Predicted_LncRNA	10.0090957639555	9.98102431183364	10.0131941681842	6.563009848101	7.53739462779747	6.66272949505955	10.0011047479911	6.92104465698601	-3.08006009100511	3.91074875860086e-25	2.9348921321993497e-22
MSTRG.10827.15	---	---	---	ENST00000389774,ENST00000361473,ENST00000356099,ENST00000412433,ENST00000396119,ENST00000336963,ENST00000460809,ENST00000447333,ENST00000469872,ENST00000515632,ENST00000495250,ENST00000352766	Predicted_LncRNA	0.0	0.0	0.0	9.65955241433461	9.30144887626604	9.52937984541481	0.0	9.49679371200515	9.49679371200515	5.372371347775241e-23	3.44535058506778e-20
MSTRG.8404.1	---	---	---	ENST00000300880,ENST00000449228,ENST00000341983	Predicted_LncRNA	8.02705700142777	8.11400603372779	7.8604773161248	6.9742276714918	6.81379096071089	7.05637034114294	8.00051345042679	6.94812965778188	-1.05238379264491	5.67821475121639e-10	8.36250483110248e-08
MSTRG.12708.1	---	---	---	ENST00000520388,ENST00000518707	Predicted_LncRNA	7.87296040147921	7.78044716912125	7.92529844647747	6.40072767099576	6.82396834387172	6.70454691870029	7.85956867235931	6.64308097785592	-1.21648769450339	1.02718060979385e-10	1.7170954724478e-08
ENST00000657451	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	2.59205871498577	2.88195275838941	3.57598888645591	0.0	3.01666678661036	3.01666678661036	0.0005207462676936	0.015715732495477
MSTRG.4629.1	---	---	---	---	Predicted_LncRNA	0.0	0.0	0.0	2.59205871498577	2.5307210267978	3.45053239567983	0.0	2.8577707124878	2.8577707124878	0.0011008860390432	0.0290973790701637
MSTRG.14096.7	---	---	---	ENST00000389900,ENST00000484458,ENST00000389902,ENST00000425013	Predicted_LncRNA	8.74215845219275	9.06771476097696	8.91525310526005	0.0	0.0	0.0	8.90837543947659	0.0	-8.90837543947659	8.97796254399497e-22	5.17013379349862e-19
MSTRG.8226.1	---	---	---	---	Predicted_LncRNA	5.5280341419206	6.28514772695786	5.99760443387524	5.00824605941062	4.68310434523033	4.69102539977237	5.93692876758457	4.79412526813777	-1.14280349944679	0.000701826813428	0.0202286703683233
ENST00000668224	---	---	---	---	Known_LncRNA	7.54748441609999	8.86145004351032	8.40600343232914	6.96263914969258	6.71881170557152	6.93280221314919	8.27164596397982	6.8714176894711	-1.40022827450872	7.83152103103171e-05	0.003086406813481
MSTRG.3068.1	---	---	---	ENST00000340149,ENST00000361507	Predicted_LncRNA	4.21852612670637	4.37826622111899	4.48285889180004	3.00745011039008	2.88195275838941	2.57680697994178	4.3598837465418	2.82206994957376	-1.53781379696804	0.0009955539647804	0.0268567338017096
MSTRG.2036.1	---	---	---	ENST00000539909,ENST00000372734,ENST00000541550,ENST00000673352,ENST00000673027,ENST00000672920,ENST00000672429,ENST00000672394,ENST00000286621,ENST00000673310	Predicted_LncRNA	5.0413430661411	5.86269388062722	0.0	0.0	0.0	0.0	3.63467898225611	0.0	-3.63467898225611	0.0018490178972904	0.0444018036163621
ENST00000519197	ENSG00000253775	AC100802.1	---	---	Known_LncRNA	3.44749966808851	2.92577554459484	2.52273454149949	0.0	0.0	0.0	2.96533658472761	0.0	-2.96533658472761	0.0003797034360994	0.0120493923509671
ENST00000426282	ENSG00000226328	NUP50-AS1	NUP50 antisense RNA 1 (head to head)	ENST00000417702,ENST00000396096,ENST00000432340,ENST00000430547,ENST00000484186,ENST00000497960,ENST00000461194,ENST00000461437,ENST00000424634,ENST00000347635,ENST00000407019,ENST00000493456,ENST00000434760,ENST00000445721	Known_LncRNA	5.0413430661411	5.56046261946977	5.14623153265179	6.81579042843254	6.36170291257417	5.89726217237699	5.24934573942089	6.35825183779457	1.10890609837368	0.0019075620461356	0.0454848933522361
ENST00000452347	ENSG00000223745	CCDC18-AS1	CCDC18 antisense RNA 1	ENST00000370267,ENST00000370272	Known_LncRNA	4.45416546102232	4.12903995217031	5.48886859066514	0.0	0.0	0.0	4.69069133461926	0.0	-4.69069133461926	1.10872897595283e-07	7.84102023855805e-06
ENST00000667008	---	---	---	---	Known_LncRNA	6.73741977015044	4.59071414195232	6.28787722207353	0.0	0.0	2.57680697994178	5.8720037113921	0.858935659980593	-5.0130680514115	1.44228621121028e-05	0.000683079143898
ENST00000660348	---	---	---	---	Known_LncRNA	1.67901321732037	3.71125679016723	4.40418708754308	0.0	0.0	0.0	3.26481903167689	0.0	-3.26481903167689	0.0004341780390993	0.0134395153972028
ENST00000515377	ENSG00000250001	AC027335.1	---	ENST00000382496,ENST00000652226	Known_LncRNA	3.29401109549286	3.12078723788762	3.02148946514895	4.70862456629207	4.81140713753799	4.5755796656819	3.14542926617648	4.69853712317065	1.55310785699418	0.0002589254637264	0.0087249285469863
MSTRG.2094.1	---	---	---	---	Predicted_LncRNA	3.71275942870688	3.12078723788762	4.03797827953576	5.00824605941062	10.7392329211058	2.57680697994178	3.62384164871009	6.10809532015273	2.48425367144265	0.0019845104382564	0.046907456644786
ENST00000412788	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	10.3699835305884	9.31941472713226	9.98981239635505	12.803129017924	12.4479066933165	12.7240719901341	9.89307021802524	12.6583692337915	2.7652990157663	9.37750773360872e-25	6.963441111154669e-22
MSTRG.253.8	---	---	---	ENST00000374695	Predicted_LncRNA	0.0	0.0	0.0	4.59312014303419	6.68570968084124	4.69102539977237	0.0	5.32328507454927	5.32328507454927	1.32705265641237e-07	9.27805773973775e-06
MSTRG.10290.13	---	---	---	---	Predicted_LncRNA	2.10538738708104	0.0	2.18904249439723	6.33033329141971	4.85175855715766	6.31225873622566	1.43147662715942	5.83145019493434	4.39997356777492	5.07805356263439e-08	3.83745271047114e-06
MSTRG.6290.1	---	---	---	ENST00000268720,ENST00000319518,ENST00000532500,ENST00000525982	Predicted_LncRNA	0.0	0.0	0.0	4.40042453860302	3.93883267327285	2.99143549046612	0.0	3.77689756744733	3.77689756744733	2.20442882021524e-05	0.0009978134532772
MSTRG.5149.1	---	---	---	---	Predicted_LncRNA	9.01510772331679	8.83389774901176	9.00462483105891	8.01970564091421	7.68428254474756	7.9150607651874	8.95121010112915	7.87301631694972	-1.07819378417943	1.5643353460337299e-12	3.41126654252252e-10
ENST00000642217	---	---	---	ENST00000505685,ENST00000255198,ENST00000646262,ENST00000511587,ENST00000646704	Known_LncRNA	6.26626287779183	6.11244606118241	6.5478309432732	5.56291956067869	5.10644164880213	5.16040573367975	6.30884662741581	5.27658898105352	-1.03225764636229	0.0003644114598005	0.011642682074352
ENST00000435624	ENSG00000225163	LINC00618	long intergenic non-protein coding RNA 618	ENST00000557222	Known_LncRNA	3.71275942870688	3.5847261882988	4.23267127147316	5.33022720195566	5.10644164880213	5.1197715456856	3.84338562949295	5.1854801321478	1.34209450265485	0.000352096098195	0.0112952556394133
ENST00000670064	---	---	---	ENST00000645538,ENST00000439040,ENST00000457986	Known_LncRNA	3.82909163863632	3.93521880141907	3.02148946514895	0.0	0.0	0.0	3.59526663506811	0.0	-3.59526663506811	1.51346107403951e-05	0.0007135907642822
ENST00000670383	---	---	---	---	Known_LncRNA	4.3798148151432	3.44602208564702	4.62839543740196	5.36585628696318	5.65474796888139	5.96764370313315	4.15141077939739	5.66274931965924	1.51133854026185	0.0005098452322501	0.0154429034194308
ENST00000660681	---	---	---	ENST00000370361,ENST00000330374,ENST00000477649	Known_LncRNA	3.29401109549286	4.37826622111899	4.82240096330429	0.0	0.0	2.31409968165243	4.16489275997205	0.77136656055081	-3.39352619942124	0.0019820753796763	0.0468734581239996
ENST00000604340	ENSG00000270557	AC013731.1	---	ENST00000672582,ENST00000673324,ENST00000263640,ENST00000413751,ENST00000440523,ENST00000424669,ENST00000434821,ENST00000605860,ENST00000539637	Known_LncRNA	4.3798148151432	3.12078723788762	4.13860653563578	2.00638816147278	1.76098820887993	1.99266210906196	3.8797361962222	1.92001282647156	-1.95972336975064	0.0014185229460042	0.0358218302140414
ENST00000456812	ENSG00000234741	GAS5	growth arrest specific 5 (non-protein coding)	ENST00000427304,ENST00000367701,ENST00000367702,ENST00000367704	Known_LncRNA	5.86429271546341	5.80710172869525	5.41053286245188	4.59312014303419	4.14772302335275	4.89742590248355	5.69397576887018	4.5460896896235	-1.14788607924668	0.0012983151186485	0.0333837586039519
ENST00000614165	ENSG00000275185	AC130324.3	---	ENST00000581216,ENST00000306049,ENST00000580840,ENST00000579183	Known_LncRNA	2.43407496918014	2.92577554459484	2.79355862619159	4.00798079185999	4.49209149645931	4.63445698348989	2.71780304665552	4.3781764239364	1.66037337728087	0.0008247942716293	0.0230159363519872
MSTRG.15265.23	---	---	---	---	Predicted_LncRNA	10.3248730908813	0.0	0.0	0.0	0.0	0.0	3.4416243636271	0.0	-3.4416243636271	3.59265741954763e-10	5.45033172052834e-08
ENST00000656218	---	---	---	---	Known_LncRNA	3.12222709162065	4.29987901454637	4.23267127147316	5.29369588523491	5.32283910846816	5.19992672275702	3.88492579254673	5.2721539054867	1.38722811293997	0.0012596896722264	0.0325090719727619
ENST00000561824	ENSG00000213599	SLX1A-SULT1A3	SLX1A-SULT1A3 readthrough (NMD candidate)	ENST00000567436,ENST00000567309,ENST00000563616,ENST00000563322,ENST00000565525,ENST00000395138,ENST00000305321,ENST00000569409,ENST00000251303,ENST00000562257,ENST00000561533,ENST00000651894,ENST00000345535,ENST00000563638,ENST00000564268,ENST00000569282,ENST00000338971,ENST00000565081,ENST00000563995,ENST00000569485,ENST00000561549	Known_LncRNA	0.0	0.0	0.0	2.81465337330948	3.69449135858247	3.16122413655421	0.0	3.22345628948205	3.22345628948205	0.0001771282561807	0.0063044075196839
ENST00000662411	---	---	---	---	Known_LncRNA	7.00810517064984	6.95626564189028	6.41369531341482	5.9625707075559	5.40648798575404	5.96764370313315	6.79268870865165	5.77890079881436	-1.01378790983728	0.0011786311424881	0.0308059856671672
ENST00000616999	ENSG00000277050	AL122125.1	---	ENST00000556137,ENST00000554745,ENST00000356218	Known_LncRNA	4.13057380303369	4.59071414195232	4.32097652720706	3.17749305791873	2.71699925234103	2.31409968165243	4.34742149073102	2.7361973306374	-1.61122416009363	0.0013117905814363	0.0336566484003808
MSTRG.2355.4	---	---	---	ENST00000280333,ENST00000623213	Predicted_LncRNA	7.50439208090587	8.04359072011141	7.22240345236339	8.08529544445569	9.15595743695702	9.10136126579668	7.59012875112689	8.78087138240313	1.19074263127624	0.0011873968242878	0.0309891681733487
ENST00000422506	ENSG00000228315	GUSBP11	glucuronidase, beta pseudogene 11	ENST00000612432,ENST00000441897,ENST00000452208,ENST00000290691,ENST00000423392,ENST00000467354,ENST00000460003,ENST00000401461,ENST00000460167,ENST00000615003	Known_LncRNA	1.07110657384614	0.0	0.0	6.9742276714918	5.07269727564202	4.94472105458994	0.35703552461538	5.66388200057459	5.30684647595921	4.64966870452593e-07	2.96569827388858e-05
MSTRG.4766.39	---	---	---	ENST00000557151,ENST00000555989,ENST00000554126,ENST00000556408,ENST00000553453,ENST00000556780,ENST00000554362,ENST00000555652	Predicted_LncRNA	10.5321645190823	10.9404963813517	8.90457546141771	0.0	0.0	1.99266210906196	10.1257454539506	0.664220703020653	-9.46152475092992	6.09588709156525e-24	4.2367316156392005e-21
ENST00000445076	ENSG00000223745	CCDC18-AS1	CCDC18 antisense RNA 1	ENST00000370267,ENST00000370272	Known_LncRNA	6.42257631107973	4.887276183572	5.59893183457041	0.0	0.0	0.0	5.63626144307405	0.0	-5.63626144307405	8.65841933628862e-10	1.22527489199427e-07
MSTRG.11015.4	---	---	---	ENST00000635992,ENST00000383767,ENST00000434693,ENST00000452462,ENST00000273139,ENST00000456853,ENST00000445033,ENST00000636680,ENST00000471426,ENST00000637842,ENST00000383766	Predicted_LncRNA	7.20397330915903	7.07869545105925	7.58537424126322	9.5261690889009	9.38459318281839	9.45578813024504	7.2893476671605	9.45551680065478	2.16616913349428	6.47198211406319e-37	1.0870464434630299e-33
ENST00000313064	ENSG00000181798	LINC00471	long intergenic non-protein coding RNA 471	---	Known_LncRNA	2.43407496918014	2.70022158497168	3.39141118207998	0.0	0.0	0.0	2.84190257874393	0.0	-2.84190257874393	0.0007241644700538	0.0207453638073001
ENST00000556430	ENSG00000258811	AL583810.2	---	---	Known_LncRNA	3.71275942870688	3.12078723788762	4.13860653563578	1.59064226172992	1.37454877652998	1.99266210906196	3.65738440074343	1.65261771577395	-2.00476668496947	0.001935544145355	0.0459888939676414
ENST00000661622	---	---	---	ENST00000565610,ENST00000562741,ENST00000301012,ENST00000565842,ENST00000563170,ENST00000568133,ENST00000569177,ENST00000332281,ENST00000568709,ENST00000563463,ENST00000563785,ENST00000562651,ENST00000567064	Known_LncRNA	5.26436775026644	5.65795879080634	4.76058650505118	3.17749305791873	3.16419738941065	3.69140315438841	5.22763768204132	3.34436453390593	-1.88327314813539	2.47927494783818e-05	0.0011090549899828
ENST00000443364	ENSG00000224259	LINC01133	long intergenic non-protein coding RNA 1133	---	Known_LncRNA	4.03690945105859	4.59071414195232	5.28442624375586	3.00745011039008	2.31677426840082	3.3131181364361	4.63734994558892	2.87911417174233	-1.75823577384659	0.0015667515133219	0.0389120388095011
ENST00000586942	ENSG00000163597	SNHG16	small nucleolar RNA host gene 16	ENST00000585390,ENST00000588920,ENST00000225276,ENST00000640006	Known_LncRNA	4.94149115725665	5.59369882454407	5.14623153265179	3.91483601477628	2.06548133965422	2.99143549046612	5.2271405048175	2.99058428163221	-2.2365562231853	0.0002758538571069	0.0092260252751028
ENST00000613921	ENSG00000277449	CEBPB-AS1	CEBPB antisense RNA 1	ENST00000303004	Known_LncRNA	5.2224360189182	5.22085284013498	5.28442624375586	3.81525991422938	3.69449135858247	4.5141969156392	5.24257170093635	4.00798272948368	-1.23458897145266	0.0015684812464081	0.0389464769611461
ENST00000664226	---	---	---	---	Known_LncRNA	2.92718834245759	2.43274935370114	3.02148946514895	0.0	0.0	0.0	2.79380905376923	0.0	-2.79380905376923	0.0007484267127046	0.0212848272610519
ENST00000664225	---	---	---	---	Known_LncRNA	5.38331164297975	6.13519865432107	6.1974570182728	7.23727339277511	7.98112854517476	8.04552720099758	5.90532243852454	7.75464304631582	1.84932060779128	2.65493060832676e-07	1.77105839086338e-05
ENST00000649589	---	---	---	ENST00000494781,ENST00000349556,ENST00000622353,ENST00000366847,ENST00000476078	Known_LncRNA	4.52487144070318	3.93521880141907	4.55746157091411	5.40062663394165	6.03366868044058	5.79773819444994	4.33918393767879	5.74401116961072	1.40482723193194	0.0001170499769009	0.0043897786127073
ENST00000432386	ENSG00000229021	AL450992.1	---	ENST00000368811,ENST00000478348,ENST00000478574,ENST00000368809,ENST00000271638,ENST00000478109	Known_LncRNA	5.69064162072963	5.30352947796978	5.70119026405129	4.09547484358913	3.50508327311319	4.07824852294057	5.56512045425023	3.89293554654763	-1.6721849077026	5.49319775010424e-06	0.0002853550383529
MSTRG.14810.1	---	---	---	ENST00000242351,ENST00000460845,ENST00000471652,ENST00000464606	Predicted_LncRNA	6.45914467173164	6.34492882111651	6.95900831278209	5.21773526826523	5.17165105766148	5.27586196030474	6.58769393521008	5.22174942874382	-1.36594450646626	2.22607617580436e-06	0.000125078707882
ENST00000626334	ENSG00000241288	AC092902.2	---	---	Known_LncRNA	5.49319166713906	5.41928711805118	5.14623153265179	4.17796474586212	4.44010734559581	3.57598888645591	5.35290343928068	4.06468699263795	-1.28821644664273	0.0010483959645411	0.0279826125321939
MSTRG.11752.3	---	---	---	ENST00000430340,ENST00000416784,ENST00000414139,ENST00000457242,ENST00000443217,ENST00000426274,ENST00000617246,ENST00000448637,ENST00000420410,ENST00000618621,ENST00000454789,ENST00000640853	Predicted_LncRNA	0.0	7.22374560145837	0.0	0.0	0.0	0.0	2.40791520048612	0.0	-2.40791520048612	3.82374788343875e-08	2.98718129224035e-06
ENST00000411630	ENSG00000226950	DANCR	differentiation antagonizing non-protein coding RNA	---	Known_LncRNA	7.97118170634615	7.74390450080071	7.65498116305657	8.82547608487361	8.73031013236286	8.88504623300113	7.79002245673448	8.81361081674587	1.02358836001139	8.04325675788101e-13	1.81432692138753e-10
ENST00000660217	---	---	---	ENST00000394422,ENST00000498179,ENST00000427972,ENST00000425117	Known_LncRNA	3.44749966808851	3.29255025989492	3.2182744478381	0.0	0.0	0.0	3.31944145860718	0.0	-3.31944145860718	4.13377436075965e-05	0.001748842729846
ENST00000613749	ENSG00000277701	AC159540.2	---	---	Known_LncRNA	4.99228080898115	4.77585560025398	3.6855766839423	0.0	1.37454877652998	0.0	4.48457103105914	0.458182925509993	-4.02638810554915	1.99738885532294e-05	0.0009131932585027
ENST00000428766	ENSG00000225292	AL158212.1	---	---	Known_LncRNA	4.3798148151432	4.59071414195232	5.28442624375586	3.00745011039008	3.16419738941065	3.57598888645591	4.75165173361713	3.24921212875221	-1.50243960486491	0.001401592284772	0.0354704667755908
ENST00000493536	ENSG00000163597	SNHG16	small nucleolar RNA host gene 16	ENST00000585390,ENST00000588920,ENST00000225276,ENST00000640006	Known_LncRNA	8.49161438392381	9.33423937045094	8.20601604350864	9.84297303327469	10.1546923595057	9.8278464994381	8.6772899326278	9.94183729740616	1.26454736477837	0.0001986567727609	0.0069359284224941
ENST00000647643	---	---	---	---	Known_LncRNA	5.80869946584578	6.01766808941111	5.3276981930415	4.81556308908992	4.72715199662699	4.5141969156392	5.71802191609946	4.68563733378537	-1.03238458231409	0.0018583636574125	0.0445678755221859
ENST00000586421	ENSG00000267270	PARD6G-AS1	PARD6G antisense RNA 1	ENST00000353265,ENST00000561195	Known_LncRNA	3.12222709162065	3.29255025989492	2.18904249439723	0.0	0.0	0.0	2.8679399486376	0.0	-2.8679399486376	0.0006912250836009	0.0199597962740656
ENST00000602361	ENSG00000269900	RMRP	RNA component of mitochondrial RNA processing endoribonuclease	ENST00000378406,ENST00000378409,ENST00000421582,ENST00000327351,ENST00000378387,ENST00000426546,ENST00000378407,ENST00000475323,ENST00000490638	Known_LncRNA	3.44749966808851	3.82757938357454	3.81285077630533	4.09547484358913	10.7038485538074	4.45008599028347	3.69597660932279	6.41646979589333	2.72049318657054	0.001196565539755	0.0311707974285385
ENST00000356906	ENSG00000198496	NBR2	neighbor of BRCA1 gene 2 (non-protein coding)	ENST00000489037,ENST00000494123,ENST00000354071,ENST00000491747,ENST00000618469,ENST00000461221,ENST00000478531,ENST00000644555,ENST00000586385,ENST00000591534,ENST00000652672,ENST00000634433,ENST00000497488,ENST00000357654,ENST00000471181,ENST00000492859,ENST00000476777,ENST00000591849,ENST00000477152,ENST00000461798,ENST00000352993,ENST00000642945,ENST00000493919,ENST00000470026,ENST00000468300,ENST00000493795	Known_LncRNA	4.94149115725665	6.69044114252667	6.81439052512418	4.09547484358913	3.69449135858247	0.995112221966656	6.14877427496917	2.92835947471275	-3.22041480025641	0.0007550043225032	0.0214361660470043
MSTRG.5808.57	---	---	---	---	Predicted_LncRNA	7.91305487787513	4.71674290013641	1.12873934084006	1.00426191569728	0.845135942920661	0.0	4.5861790396172	0.616465952872647	-3.96971308674455	8.94921221105492e-05	0.0034735253161851
ENST00000538012	ENSG00000218416	PP14571	uncharacterized LOC100130449	ENST00000426280,ENST00000469694,ENST00000264039,ENST00000420138	Known_LncRNA	6.56359692291896	5.22085284013498	4.76058650505118	4.00798079185999	2.06548133965422	3.45053239567983	5.51501208936837	3.17466484239801	-2.34034724697036	0.0014893365500577	0.0373087877475984
ENST00000669149	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	4.70862456629207	4.08139760167818	4.23865237933607	0.0	4.34289151576877	4.34289151576877	4.19545946860551e-07	2.70534271255308e-05
ENST00000657484	---	---	---	ENST00000435525,ENST00000443503,ENST00000411817,ENST00000273179,ENST00000264741	Known_LncRNA	6.04355477469541	5.94226090024417	5.59893183457041	4.40042453860302	4.14772302335275	4.63445698348989	5.86158250317	4.39420151514855	-1.46738098802144	6.77376977643695e-06	0.0003460165207161
MSTRG.12236.1	---	---	---	---	Predicted_LncRNA	7.22536149990977	7.28607058143588	7.85309184298274	6.13767305831721	5.7854855004002	6.21915751901314	7.45484130810946	6.04743869257685	-1.40740261553261	8.66153918576058e-07	5.29709250386038e-05
ENST00000665874	---	---	---	---	Known_LncRNA	0.0	6.38344958284993	4.40418708754308	0.0	0.0	0.0	3.595878890131	0.0	-3.595878890131	0.0020154478966696	0.04750342680343
ENST00000662915	---	---	---	---	Known_LncRNA	5.08879157415838	4.12903995217031	4.62839543740196	0.0	0.0	0.0	4.61540898791022	0.0	-4.61540898791022	5.55103643752156e-08	4.13689743716441e-06
MSTRG.15688.1	---	---	---	ENST00000543751,ENST00000626154,ENST00000536987,ENST00000541717,ENST00000298048,ENST00000536329,ENST00000627766,ENST00000536860,ENST00000545008	Predicted_LncRNA	5.34474309766003	5.41928711805118	5.45023234727953	6.5002700800987	6.70786187116959	6.03475081065034	5.40475418766358	6.41429425397288	1.0095400663093	0.0004133160954717	0.0129013144420187
ENST00000435966	ENSG00000223546	LINC00630	long intergenic non-protein coding RNA 630	---	Known_LncRNA	2.92718834245759	4.37826622111899	4.23267127147316	2.00638816147278	1.76098820887993	0.995112221966656	3.84604194501658	1.58749619743979	-2.25854574757679	0.0012370443988371	0.0320242422280994
MSTRG.5058.1	---	---	---	ENST00000525066,ENST00000267868,ENST00000532743,ENST00000645673,ENST00000527860,ENST00000382643,ENST00000423169,ENST00000531277,ENST00000533741,ENST00000526763,ENST00000557850	Predicted_LncRNA	4.21852612670637	4.12903995217031	4.13860653563578	5.81571465263205	5.60839650129634	4.84852759304919	4.16205753817082	5.42421291565919	1.26215537748837	0.0013217307034028	0.0338685691031062
ENST00000669349	---	---	---	ENST00000519390,ENST00000520217,ENST00000518841,ENST00000292430,ENST00000519387,ENST00000522591,ENST00000336138	Known_LncRNA	0.0	0.0	3.2182744478381	6.34825650911469	6.19919127172075	4.89742590248355	1.07275814927937	5.81495789443966	4.7421997451603	0.000338456200965	0.0109496966621269
MSTRG.5312.5	---	---	---	ENST00000637054,ENST00000566347,ENST00000564846,ENST00000562767,ENST00000637223,ENST00000249806,ENST00000637823,ENST00000637450,ENST00000638076,ENST00000637888,ENST00000564752,ENST00000567060,ENST00000638144,ENST00000637494,ENST00000637667,ENST00000563917,ENST00000565471,ENST00000636212,ENST00000636314,ENST00000538696,ENST00000635747,ENST00000636876,ENST00000636020	Predicted_LncRNA	6.69205217619302	7.21309122177675	6.91712446882662	8.00847812851375	7.85776870289602	7.97324023813525	6.9407559555988	7.94649568984834	1.00573973424954	3.64949454716347e-07	2.38711120384886e-05
ENST00000450995	ENSG00000229261	AL596223.1	---	ENST00000354624	Known_LncRNA	2.70159816905037	3.12078723788762	2.18904249439723	0.0	0.0	0.0	2.67047596711174	0.0	-2.67047596711174	0.0015349621488914	0.0382488060160348
ENST00000663775	---	---	---	---	Known_LncRNA	3.44749966808851	2.43274935370114	3.6855766839423	0.0	0.0	0.0	3.18860856857732	0.0	-3.18860856857732	0.0001692835558126	0.0060773227283689
MSTRG.6051.4	---	---	---	ENST00000563952,ENST00000330687,ENST00000394106	Predicted_LncRNA	0.0	0.0	0.0	7.56305498969334	7.42153367909444	7.39965655999359	0.0	7.46141507626046	7.46141507626046	4.472295652566201e-16	1.51679627170495e-13
ENST00000404891	ENSG00000218416	PP14571	uncharacterized LOC100130449	ENST00000425056,ENST00000426280,ENST00000427506,ENST00000469694,ENST00000495100,ENST00000264039,ENST00000420138	Known_LncRNA	5.69064162072963	4.52331536830339	5.3276981930415	4.00798079185999	2.88195275838941	3.3131181364361	5.18055172735817	3.40101722889517	-1.77953449846301	0.0008508992010454	0.0235936920121737
ENST00000562493	ENSG00000261770	AC006504.1	---	---	Known_LncRNA	7.84559801175553	7.3062612766413	7.77708002693859	5.93910949067246	6.91247145624712	6.38264221610364	7.64297977177847	6.41140772100774	-1.23157205077073	0.0004738132865557	0.0144883764572111
ENST00000553259	ENSG00000258334	AC125611.4	---	ENST00000547923,ENST00000532332,ENST00000551567,ENST00000550709,ENST00000551194,ENST00000546776,ENST00000548311,ENST00000550346,ENST00000551245,ENST00000451891,ENST00000546735,ENST00000549891,ENST00000551192,ENST00000257909,ENST00000380327,ENST00000257860,ENST00000548817,ENST00000549534,ENST00000547807,ENST00000533401,ENST00000537252,ENST00000549275,ENST00000530631	Known_LncRNA	6.32688224845008	5.86269388062722	5.94299452306412	3.81525991422938	3.50508327311319	3.3131181364361	6.04419021738047	3.54448710792622	-2.49970310945425	1.50863046040454e-11	2.83799539196741e-09
ENST00000658659	---	---	---	---	Known_LncRNA	2.92718834245759	3.5847261882988	4.13860653563578	5.62304792372989	4.49209149645931	5.99036134301982	3.55017368879739	5.36850025440301	1.81832656560562	0.0014214594158509	0.0358895608560443
MSTRG.4311.2	---	---	---	---	Predicted_LncRNA	4.88884802110925	4.52331536830339	5.3276981930415	0.0	2.88195275838941	0.0	4.91328719415138	0.960650919463137	-3.95263627468824	0.0017585556717778	0.0427881004906563
MSTRG.7144.5	---	---	---	ENST00000585301,ENST00000578200,ENST00000578386,ENST00000582081,ENST00000262435	Predicted_LncRNA	5.17924897099722	4.71674290013641	7.44505348544999	9.1582434570929	8.81948186811731	7.73172072720212	5.78034845219454	8.56981535080411	2.78946689860957	0.0019191288295051	0.0456851105349182
MSTRG.10290.5	---	---	---	---	Predicted_LncRNA	7.22536149990977	6.9174147695797	7.19929075116259	8.33041285339842	8.07359673520156	8.09353136506242	7.11402234021735	8.16584698455413	1.05182464433678	3.4350921389637404e-09	4.2401599274026e-07
ENST00000668946	---	---	---	---	Known_LncRNA	4.13057380303369	3.29255025989492	3.2182744478381	0.0	0.0	0.0	3.54713283692224	0.0	-3.54713283692224	2.22052031853373e-05	0.0010041306753246
MSTRG.2342.14	---	---	---	ENST00000652548,ENST00000368836,ENST00000494792,ENST00000498770,ENST00000464099,ENST00000466270	Predicted_LncRNA	0.0	0.0	0.0	7.88499211272967	0.0	0.0	0.0	2.62833070424322	2.62833070424322	8.06711415926197e-09	8.82113455486085e-07
ENST00000618303	ENSG00000274414	AL121772.1	---	ENST00000216962	Known_LncRNA	5.5620549426031	5.68904635975578	5.3276981930415	3.00745011039008	4.01187542758372	3.89775330696248	5.52626649846679	3.63902628164543	-1.88724021682137	4.62438587697745e-06	0.0002437225829701
MSTRG.2483.14	---	---	---	ENST00000485602,ENST00000532535,ENST00000464261,ENST00000479072,ENST00000532523,ENST00000527810,ENST00000478773,ENST00000459679,ENST00000493547,ENST00000496834,ENST00000464590,ENST00000463452,ENST00000487112,ENST00000490830,ENST00000524661,ENST00000528216,ENST00000464441,ENST00000529944,ENST00000278243,ENST00000534498,ENST00000483829,ENST00000528526,ENST00000396991,ENST00000525937,ENST00000475884,ENST00000300730,ENST00000464229,ENST00000469307,ENST00000465237,ENST00000489571,ENST00000465307,ENST00000396993,ENST00000464906,ENST00000532017,ENST00000396986,ENST00000495026,ENST00000477358	Predicted_LncRNA	8.25213661782041	8.33155568671684	7.99406272699429	0.0	0.0	0.0	8.19258501051051	0.0	-8.19258501051051	3.6817779064522303e-19	1.77895438789566e-16
MSTRG.4728.4	---	---	---	ENST00000471583,ENST00000557045,ENST00000554244,ENST00000487861,ENST00000460526,ENST00000497460,ENST00000468382,ENST00000488612,ENST00000553595,ENST00000478014,ENST00000492236,ENST00000469165,ENST00000479335,ENST00000487270	Predicted_LncRNA	0.0	0.0	0.0	0.0	2.31677426840082	9.00703508374629	0.0	3.77460311738237	3.77460311738237	1.3528349107742102e-09	1.83704304033987e-07
ENST00000644590	---	---	---	---	Known_LncRNA	5.83676385498773	5.6261865584334	6.12571714530491	7.21790730335358	7.45466160905994	7.25705816917414	5.86288918624201	7.30987569386255	1.44698650762054	1.74705013370793e-10	2.84957004930155e-08
ENST00000665523	---	---	---	ENST00000260563,ENST00000370128,ENST00000370126,ENST00000498617,ENST00000483474	Known_LncRNA	2.10538738708104	0.0	0.0	4.53170422093035	4.14772302335275	4.99051484162786	0.70179579569368	4.55664736197032	3.85485156627664	2.21894890692848e-05	0.0010037417870494
MSTRG.2011.22	---	---	---	---	Predicted_LncRNA	0.0	0.0	0.0	7.71582980577657	7.28084683220294	7.14002413943781	0.0	7.37890025913911	7.37890025913911	2.5275475883602803e-15	7.92459186992391e-13
ENST00000435127	ENSG00000232759	AC002480.2	---	ENST00000442252,ENST00000650428,ENST00000439708	Known_LncRNA	6.04355477469541	6.5450956079192	6.4727153564302	5.46775001527933	5.35126438180094	4.74545919098334	6.3537885796816	5.18815786268787	-1.16563071699373	0.0004947876215852	0.0150352349675251
ENST00000424349	ENSG00000225733	FGD5-AS1	FGD5 antisense RNA 1	ENST00000323373,ENST00000475707,ENST00000435454,ENST00000425241,ENST00000413118	Known_LncRNA	8.58970528433801	8.37998756695909	7.67187051918126	9.57074247721288	9.33919177575005	9.49999631036555	8.21385445682612	9.46997685444283	1.25612239761671	4.52025215728584e-06	0.0002386801408559
ENST00000643866	---	---	---	ENST00000416992,ENST00000421797	Known_LncRNA	8.28815335611313	8.90843557740814	8.73814838732874	7.39216475407973	7.59795592864523	7.33899626006238	8.64491244028334	7.44303898092911	-1.20187345935422	7.82237583791427e-08	5.63946531537889e-06
MSTRG.6642.29	---	---	---	ENST00000527372,ENST00000590565,ENST00000585573,ENST00000628822,ENST00000533112,ENST00000531253	Predicted_LncRNA	3.44749966808851	3.44602208564702	3.2182744478381	6.80285069007794	3.28699557481754	6.74518630403081	3.37059873385788	5.61167752297543	2.24107878911755	0.0010333102575366	0.0276899672583729
ENST00000598754	ENSG00000268621	IGFL2-AS1	IGFL2 antisense RNA 1	---	Known_LncRNA	5.2224360189182	5.17766711699729	5.94299452306412	6.5933853780724	6.54513971645211	6.41658682801267	5.44769921965987	6.51837064084573	1.07067142118586	0.0005792840035351	0.0172171943313195
MSTRG.6828.3	---	---	---	ENST00000587304,ENST00000436535	Predicted_LncRNA	1.07110657384614	3.44602208564702	5.09705967100778	0.0	0.0	0.0	3.20472944350031	0.0	-3.20472944350031	0.0010454652238741	0.0279202342430348
ENST00000418518	ENSG00000225613	LINCMD1	long intergenic non-protein coding RNA, muscle differentiation 1	---	Known_LncRNA	3.93673929020031	4.45261293999394	2.79355862619159	1.59064226172992	1.37454877652998	0.0	3.72763695212861	0.9883970127533	-2.73923993937531	0.0009751805282078	0.026438560792426
MSTRG.4579.1	---	---	---	ENST00000267430,ENST00000556036,ENST00000542564	Predicted_LncRNA	6.54670497298698	6.04195267512228	5.73372676971362	6.98572384916257	6.93142269109702	7.52941946337514	6.10746147260763	7.14885533454491	1.04139386193728	0.0019050435907866	0.0454325203071174
ENST00000659936	---	---	---	ENST00000374321,ENST00000374328,ENST00000503753,ENST00000449358,ENST00000374323,ENST00000512997	Known_LncRNA	7.75290668796392	8.27633274984592	8.17673275989517	6.73635167184815	6.82396834387172	6.67680374510792	8.068657399235	6.74570792027593	-1.32294947895907	6.28692390419786e-10	9.20134356634302e-08
MSTRG.276.9	---	---	---	---	Predicted_LncRNA	0.0	0.0	0.0	5.50017577950862	6.59353426926657	6.23826461834808	0.0	6.11065822237442	6.11065822237442	4.54725548375979e-11	8.09033016005928e-09
MSTRG.276.8	---	---	---	---	Predicted_LncRNA	5.78007829831852	6.15759798277676	6.30962373784031	6.84132684990417	7.75513583477696	6.96756572946289	6.0824333396452	7.18800947138134	1.10557613173614	0.0012376988566043	0.0320353066007327
ENST00000661900	---	---	---	---	Known_LncRNA	3.71275942870688	2.43274935370114	3.39141118207998	0.0	0.0	0.0	3.178973321496	0.0	-3.178973321496	0.0001793190898377	0.0063658851352173
MSTRG.14295.10	---	---	---	ENST00000402497,ENST00000407526,ENST00000398810,ENST00000644879,ENST00000398812,ENST00000406641,ENST00000643299,ENST00000645075,ENST00000401949,ENST00000357271,ENST00000439044,ENST00000402578,ENST00000644769,ENST00000403097,ENST00000335866,ENST00000644716	Predicted_LncRNA	10.9185165436365	10.8811622474762	10.8834079027359	9.6396776324462	9.68739802698151	9.80079040429126	10.8943622312829	9.70928868790632	-1.18507354337654	2.10240087161847e-65	1.34828879170412e-61
MSTRG.14096.8	---	---	---	ENST00000389900,ENST00000484458,ENST00000389902,ENST00000425013	Predicted_LncRNA	8.47385289762357	8.13673423067094	8.50828125046178	9.77503044368344	9.67620621552012	9.71813986924468	8.3729561262521	9.72312550948275	1.35016938323065	4.0403274117695e-23	2.6148702471180502e-20
ENST00000417089	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	0.0	0.0	0.0	4.25599207927317	3.50508327311319	4.23865237933607	0.0	3.99990924390748	3.99990924390748	3.37209294462482e-06	0.000183550096208
MSTRG.7480.1	---	---	---	ENST00000343848,ENST00000538664,ENST00000612461,ENST00000308268,ENST00000415576	Predicted_LncRNA	7.1265143079483	6.75061903624036	6.95900831278209	7.75666465644949	8.17249090926954	7.90911166593446	6.94538055232358	7.94608907721783	1.00070852489425	1.21757872890162e-06	7.20880183396021e-05
MSTRG.10284.16	---	---	---	---	Predicted_LncRNA	5.5280341419206	5.59369882454407	4.03797827953576	6.53198098977041	7.29554916477519	7.20944228984552	5.05323708200014	7.01232414813037	1.95908706613023	0.0001564011686519	0.0056623885252176
MSTRG.5254.3	---	---	---	ENST00000558783,ENST00000558043,ENST00000559280,ENST00000560278,ENST00000634318,ENST00000634538,ENST00000635529,ENST00000559519,ENST00000635593,ENST00000635413,ENST00000635605,ENST00000300035,ENST00000634251,ENST00000634847,ENST00000635160,ENST00000634259,ENST00000635511,ENST00000634811,ENST00000634654,ENST00000635704,ENST00000558008,ENST00000303052,ENST00000560234,ENST00000380258,ENST00000634529,ENST00000635320,ENST00000607537	Predicted_LncRNA	6.40393856248261	5.34315637524875	6.17393788357921	7.04186949796518	7.45466160905994	7.61230952220047	5.97367760710352	7.3696135430752	1.39593593597167	0.0001378803797642	0.005084492164185
ENST00000556379	ENSG00000215256	DHRS4-AS1	DHRS4 antisense RNA 1	ENST00000558581,ENST00000558263,ENST00000313250,ENST00000397075,ENST00000559632,ENST00000397074,ENST00000543741	Known_LncRNA	2.10538738708104	0.0	3.6855766839423	5.76324161955732	5.23404004263325	6.29411294404663	1.93032135700778	5.76379820207907	3.83347684507129	0.0002010448205106	0.0070123638161195
MSTRG.10538.2	---	---	---	ENST00000398822,ENST00000215832,ENST00000544786	Predicted_LncRNA	0.0	0.0	0.0	5.76324161955732	4.81140713753799	6.96756572946289	0.0	5.84740482885273	5.84740482885273	5.2208329847283704e-09	6.05754016570194e-07
ENST00000545440	ENSG00000255717	SNHG1	small nucleolar RNA host gene 1	ENST00000377891,ENST00000377890,ENST00000377889,ENST00000535296	Known_LncRNA	2.70159816905037	3.82757938357454	3.81285077630533	5.0957245031157	4.96645319352399	4.63445698348989	3.44734277631008	4.89887822670986	1.45153545039978	0.0020751456230195	0.0485804430184809
ENST00000654369	---	---	---	---	Known_LncRNA	0.0	0.0	0.0	3.46717121584615	3.16419738941065	2.57680697994178	0.0	3.06939186173286	3.06939186173286	0.0003684576850505	0.0117559832357338
ENST00000432673	ENSG00000225177	AL590617.2	---	ENST00000491526,ENST00000468095	Known_LncRNA	4.83421098026118	5.03976571802124	3.92980137441401	3.46717121584615	2.71699925234103	2.31409968165243	4.60125935756548	2.8327567166132	-1.76850264095227	0.0018077925425909	0.0436593348594779
ENST00000563449	ENSG00000261613	AC093525.6	---	ENST00000566659,ENST00000441549,ENST00000460496,ENST00000461815,ENST00000389224,ENST00000492021,ENST00000474706,ENST00000268673,ENST00000342085,ENST00000570136,ENST00000491073	Known_LncRNA	5.83676385498773	5.91622311569044	6.15002897172384	4.59312014303419	4.68310434523033	4.38299305495723	5.96767198080067	4.55307251440725	-1.41459946639342	1.90905137838727e-06	0.0001087380867476
ENST00000431095	ENSG00000130600	H19	H19, imprinted maternally expressed transcript (non-protein coding)	---	Known_LncRNA	2.70159816905037	4.03538183310715	5.88623587729942	6.63778217632391	7.51871915406555	7.50596135650535	4.20773862648565	7.2208208956316	3.01308226914596	0.0014937817035064	0.0374076451871342
ENST00000649834	---	---	---	ENST00000371222	Known_LncRNA	3.29401109549286	3.29255025989492	3.92980137441401	1.00426191569728	1.37454877652998	0.0	3.50545424326726	0.792936897409087	-2.71251734585818	0.0008791836720828	0.0242554293951558
ENST00000667950	---	---	---	ENST00000495709,ENST00000318602,ENST00000495442,ENST00000543436	Known_LncRNA	4.52487144070318	4.65510426225214	4.13860653563578	0.0	0.0	0.0	4.4395274128637	0.0	-4.4395274128637	7.64752178230452e-08	5.5229044119185e-06