{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["Sheet1"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Sheet1","index":0,"n_rows":24,"n_cols":116,"rows_kept":24,"merged":[[3,0,4,0],[3,1,4,1],[3,2,4,2],[3,3,3,76],[3,77,3,88],[3,89,3,94],[3,95,3,97],[3,98,3,100],[3,101,3,106],[3,107,3,109],[3,110,3,112],[3,113,4,113],[3,114,4,114],[3,115,4,115],[18,3,18,20],[18,21,18,23],[18,24,18,28],[18,29,18,31],[18,32,18,37],[18,38,18,43],[18,44,18,46],[18,47,18,49],[18,50,18,52],[18,53,18,64],[18,65,18,79],[18,80,18,91],[18,92,18,94],[18,95,18,103],[18,104,18,106],[18,107,18,112]],"flags":["formulas_cached_only"]}
[]
["Supplementary Table S2: Expression (RPKMs) and variation coefficient (VC) of the selected tomato genes for the stability analysis."]
[]
["Gene ID","Name","Human readable description","Rio Grande (RG)-prf3 leaf tissue",{"$nulls":73},"Rio Grande (RG)-PtoR leaf tissue",{"$nulls":11},"Rio Grande (RG)-PtoR leaf tissue",{"$nulls":5},"Rio Grande (RG)-prf3 leaf tissue",null,null,"Rio Grande (RG)-prf19 leaf tissue",null,null,"Rio Grande (RG)-PtoR leaf tissue",{"$nulls":5},"Rio Grande (RG)-prf3 leaf tissue",null,null,"Rio Grande (RG)-prf19 leaf tissue",null,null,"RPKM average","RPKM SD","VAR coeficient (%)"]
[{"$nulls":3},"PAMP_Mock_ 30min_rep1","PAMP_Mock_ 30min_rep2","PAMP_Mock_ 30min_rep3","csp22_ 30min_rep1","csp22_ 30min_rep2","csp22_ 30min_rep3","flg22_30min_rep1","flg22_30min_rep2","flg22_30min_rep3","flg28_30min_rep1","flg28_30min_rep2","flg28_30min_rep3","LPS_30min_rep1","LPS_30min_rep2","LPS_30min_rep3","PGN_30min_rep1","PGN_30min_rep2","PGN_30min_rep3","PAMP_Mock_6h_rep1","PAMP_Mock_6h_rep2","PAMP_Mock_6h_rep3","csp22_ 6h_rep1","csp22_ 6h_rep2","csp22_ 6h_rep3","flg22_6h_rep2","flg22_6h_rep3","flgII-28_6h_rep1","flgII-28_6h_rep2","flgII-28_6h_rep3","LPS_6h_rep1","LPS_6h_rep2","LPS_6h_rep3","PGN_6h_rep1","PGN_6h_rep2","PGN_6h_rep3","Bacterial_Mock_6h_rep1","Bacterial_Mock_6h_rep2","Bacterial_Mock_6h_rep3","Pst_DC3000_6h_rep1","Pst_DC3000_6h_rep2","Pst_DC3000_6h_rep3","Pst_DC3000_ΔhrcQ-U_ 6h_rep1","Pst_DC3000_ΔhrcQ-U_ 6h_rep2","Pst_DC3000_ΔhrcQ-U_ 6h_rep3","Pst_DC3000_ΔhrcQ-U_ΔfliC 6h_rep1","Pst_DC3000_ΔhrcQ-U_ΔfliC 6h_rep2","Pst_DC3000_ΔhrcQ-U_ΔfliC 6h_rep3","Pst_DC3000_Δ28_6h_rep1","Pst_DC3000_Δ28_6h_rep2","Pst_DC3000_Δ28_6h_rep3","Pst_DC3000_ΔAvrPto_ ΔAvrPtoB_6h_rep1","Pst_DC3000_ΔAvrPto_ ΔAvrPtoB_6h_rep2","Pst_DC3000_ΔAvrPto_ ΔAvrPtoB_6h_rep3","Pseudomonas_fluorescens_6h_rep1","Pseudomonas_fluorescens_6h_rep2","Pseudomonas_fluorescens_6h_rep3","Pseudomonas_putida_6h_rep1","Pseudomonas_putida_6h_rep2","Pseudomonas_putida_6h_rep3","Agrobacterium_tumefasciens_6h_rep1","Agrobacterium_tumefasciens_6h_rep2","Agrobacterium_tumefasciens_6h_rep3","Non_treated_tissue_30min_Bacteria_rep1","Non_treated_tissue_30min_Bacteria_rep2","Non_treated_tissue_30min_Bacteria_rep3","Non_treated_tissue_6h_Bacteria_rep1","Non_treated_tissue_6h_Bacteria_rep2","Non_treated_tissue_6h_Bacteria_rep3","Non_treated_tissue_30min_PAMPs_rep1","Non_treated_tissue_30min_PAMPs_rep2","Non_treated_tissue_30min_PAMPs_rep3","Non_treated_tissue_6h_PAMPs_rep1","Non_treated_tissue_6h_PAMPs_rep2","Non_treated_tissue_6h_PAMPs_rep3","Pst_DC3000_ΔhopQ1-1_6h_rep1","Pst_DC3000_ΔhopQ1-1_6h_rep2","Pst_DC3000_ΔhopQ1-1_6h_rep3","Pst_DC3000_ΔhopQ1-1_ ΔfliC_6h_rep1","Pst_DC3000_ΔhopQ1-1_ ΔfliC_6h_rep2","Pst_DC3000_ΔhopQ1-1_ ΔfliC_6h_rep3","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_6h_rep1","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_6h_rep2","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_6h_rep3","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_ΔfliC_6h_rep1","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_ΔfliC_6h_rep2","Pst_DC3000_ΔhopQ1-1_ΔavrPto_ΔavrPtoB_ΔfliC_6h_rep3","Pst_DC3000_4h_rep1","Pst_DC3000_4h_rep2","Pst_DC3000_4h_rep3","Pst_DC3000_ΔavrPto_ΔavrPtoB_4h_rep1","Pst_DC3000_ΔavrPto_ΔavrPtoB_4h_rep2","Pst_DC3000_ΔavrPto_ΔavrPtoB_4h_rep3","Pst_DC3000_4h_rep1","Pst_DC3000_4h_rep2","Pst_DC3000_4h_rep3","Pst_DC3000_4h_rep1","Pst_DC3000_4h_rep2","Pst_DC3000_4h_rep3","Pst_DC3000_6h_rep1","Pst_DC3000_6h_rep2","Pst_DC3000_6h_rep3","Pst_DC3000_ΔavrPto_ΔavrPtoB_6h_rep1","Pst_DC3000_ΔavrPto_ΔavrPtoB_6h_rep2","Pst_DC3000_ΔavrPto_ΔavrPtoB_6h_rep3","Pst_DC3000_6h_rep1","Pst_DC3000_6h_rep2","Pst_DC3000_6h_rep3","Pst_DC3000_6h_rep1","Pst_DC3000_6h_rep2","Pst_DC3000_6h_rep3"]
["Solyc08g077220.2.1","SlTspan","Tetraspanin family protein (AHRD V1 **-- B6TTZ1_MAIZE); contains Interpro domain(s)  IPR018499  Tetraspanin ",{"v":56.8549034573463,"d":"56.85"},{"v":57.8180518436659,"d":"57.82"},{"v":64.9323760245123,"d":"64.93"},{"v":50.3514894593243,"d":"50.35"},{"v":55.6756603690586,"d":"55.68"},{"v":53.6239006559893,"d":"53.62"},{"v":48.2515251943158,"d":"48.25"},{"v":55.8998898406625,"d":"55.90"},{"v":53.5632945620846,"d":"53.56"},{"v":55.1223619408054,"d":"55.12"},{"v":62.2017012994136,"d":"62.20"},{"v":57.5102745964179,"d":"57.51"},{"v":53.1411851043449,"d":"53.14"},{"v":57.8017532804252,"d":"57.80"},{"v":57.2877356473799,"d":"57.29"},{"v":60.7487611509098,"d":"60.75"},{"v":65.8546937121859,"d":"65.85"},{"v":56.4643812980753,"d":"56.46"},{"v":58.0246307905101,"d":"58.02"},{"v":53.7178850230849,"d":"53.72"},{"v":55.1114421011247,"d":"55.11"},57.09,{"v":62.2477648932194,"d":"62.25"},{"v":63.4104629279924,"d":"63.41"},{"v":51.5560811680109,"d":"51.56"},{"v":61.8638622550643,"d":"61.86"},{"v":52.5194628529482,"d":"52.52"},{"v":54.9843788011768,"d":"54.98"},{"v":56.6546658797197,"d":"56.65"},{"v":63.9398536268446,"d":"63.94"},{"v":57.5723455993258,"d":"57.57"},{"v":56.3165077147453,"d":"56.32"},{"v":51.3676946891776,"d":"51.37"},{"v":58.4836939948028,"d":"58.48"},{"v":55.3420472862252,"d":"55.34"},{"v":53.7785640849759,"d":"53.78"},{"v":59.5862811091497,"d":"59.59"},{"v":60.470460180202,"d":"60.47"},{"v":52.863188638208,"d":"52.86"},{"v":53.8173182441389,"d":"53.82"},{"v":55.8710762958286,"d":"55.87"},{"v":49.5427429387817,"d":"49.54"},{"v":44.1906755314976,"d":"44.19"},{"v":55.7539259266189,"d":"55.75"},{"v":48.972197984732,"d":"48.97"},{"v":45.1133558814868,"d":"45.11"},{"v":58.0608175829165,"d":"58.06"},{"v":51.1041166321912,"d":"51.10"},{"v":47.8978557642931,"d":"47.90"},{"v":54.5633239598124,"d":"54.56"},{"v":51.6806987745386,"d":"51.68"},{"v":48.8302362760896,"d":"48.83"},{"v":59.620298339636,"d":"59.62"},{"v":62.578320056992,"d":"62.58"},{"v":55.4418341810327,"d":"55.44"},{"v":59.4423145229681,"d":"59.44"},{"v":52.3494145104636,"d":"52.35"},{"v":57.352367585574,"d":"57.35"},{"v":58.0802376830743,"d":"58.08"},{"v":60.184792356792,"d":"60.18"},{"v":50.001271051513,"d":"50.00"},{"v":67.2422879329081,"d":"67.24"},38.21,48.58,39.96,37.04,44.03,45.08,48.86,52.24,47.69,44.02,37.86,47.82,44.57,62.82,61.19,51.96,67.65,52.91,50.29,61.55,55.61,{"v":48,"d":"48.00"},{"v":51.1,"d":"51.10"},{"v":47.4,"d":"47.40"},45.51,33.69,{"v":44.5,"d":"44.50"},{"v":44.6,"d":"44.60"},55.08,55.15,{"v":60.7,"d":"60.70"},57.33,57.14,65.21,64.24,60.98,57.84,54.63,59.61,58.59,58.16,56.31,56.96,53.14,54.57,56.88,58.29,58.99,{"v":54.383969936975504,"d":"54.38"},{"v":6.651566741013415,"d":"6.65"},{"v":12.23074878263169,"d":"12.23"}]
["Solyc07g062570.2.1","SlUBE2N","Ubiquitin-conjugating enzyme E2 N (AHRD V1 **** B5XC59_SALSA); contains Interpro domain(s)  IPR000608  Ubiquitin-conjugating enzyme, E2 ",{"v":234.263039578266,"d":"234.26"},{"v":219.52607925453,"d":"219.53"},{"v":222.66201389658,"d":"222.66"},{"v":212.495927506293,"d":"212.50"},{"v":243.394944761105,"d":"243.39"},{"v":208.293617682321,"d":"208.29"},{"v":220.023243615587,"d":"220.02"},{"v":231.246934584593,"d":"231.25"},{"v":191.989763913482,"d":"191.99"},{"v":211.757640931479,"d":"211.76"},{"v":230.359698221862,"d":"230.36"},{"v":225.023169639164,"d":"225.02"},{"v":260.422973555469,"d":"260.42"},{"v":262.856551106627,"d":"262.86"},{"v":222.933785298922,"d":"222.93"},{"v":236.435744761461,"d":"236.44"},{"v":245.678782305164,"d":"245.68"},{"v":204.822539568056,"d":"204.82"},{"v":283.636470772237,"d":"283.64"},{"v":224.875021437708,"d":"224.88"},{"v":190.960916331462,"d":"190.96"},298.84,{"v":280.207863297609,"d":"280.21"},{"v":258.585527204823,"d":"258.59"},{"v":257.224455576833,"d":"257.22"},{"v":241.011949358525,"d":"241.01"},{"v":251.936910122726,"d":"251.94"},{"v":245.997932244994,"d":"246.00"},{"v":229.325735341132,"d":"229.33"},{"v":260.372430283971,"d":"260.37"},{"v":247.558088695541,"d":"247.56"},{"v":226.125439720794,"d":"226.13"},{"v":253.390217863153,"d":"253.39"},{"v":247.011786398054,"d":"247.01"},{"v":189.715092294687,"d":"189.72"},{"v":264.650203157369,"d":"264.65"},{"v":201.879745912958,"d":"201.88"},{"v":187.818778356234,"d":"187.82"},{"v":252.482450991273,"d":"252.48"},{"v":239.560774277076,"d":"239.56"},{"v":234.18166318626,"d":"234.18"},{"v":250.132257761616,"d":"250.13"},{"v":260.711303474374,"d":"260.71"},{"v":204.747416862544,"d":"204.75"},{"v":236.964474314864,"d":"236.96"},{"v":207.562102686442,"d":"207.56"},{"v":224.260283316478,"d":"224.26"},{"v":253.616610491528,"d":"253.62"},{"v":202.70428153026,"d":"202.70"},{"v":237.43199624567,"d":"237.43"},{"v":237.082921188212,"d":"237.08"},{"v":246.636935793661,"d":"246.64"},{"v":222.110971889721,"d":"222.11"},{"v":267.29126868658,"d":"267.29"},{"v":257.354700002819,"d":"257.35"},{"v":235.812053983652,"d":"235.81"},{"v":282.74001027922,"d":"282.74"},{"v":253.195438498288,"d":"253.20"},{"v":238.760667518413,"d":"238.76"},{"v":216.08363833507,"d":"216.08"},{"v":232.154642089909,"d":"232.15"},{"v":198.173002874794,"d":"198.17"},166.77,199.96,205.93,177.19,175.35,166.27,259.04,241.42,235.67,211.57,211.06,196.44,{"v":213.3,"d":"213.30"},205.63,204.61,187.03,226.82,201.85,212.77,{"v":200.3,"d":"200.30"},204.86,168.75,167.67,174.35,191.52,191.59,191.11,222.08,{"v":228.8,"d":"228.80"},242.91,245.66,259.68,262.68,219.84,261.89,278.11,198.98,{"v":197.9,"d":"197.90"},208.11,252.11,219.11,245.27,237.27,250.33,231.23,221.82,202.63,261.55,{"v":226.85320800755,"d":"226.85"},{"v":28.574717159641544,"d":"28.57"},{"v":12.596126548358328,"d":"12.60"}]
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["Solyc06g005060.2.1","SlEF1α","Elongation factor 1-alpha (AHRD V1 ***- Q8H9C0_SOLTU); contains Interpro domain(s)  IPR004539  Translation elongation factor EF1A, eukaryotic and archaeal  IPR000795  Protein synthesis factor, GTP-binding ",{"v":327.093979605793,"d":"327.09"},{"v":274.412819718557,"d":"274.41"},{"v":364.169412346855,"d":"364.17"},{"v":313.016777255632,"d":"313.02"},{"v":257.147462499286,"d":"257.15"},{"v":300.064390473543,"d":"300.06"},{"v":317.58299937416,"d":"317.58"},{"v":279.829735405281,"d":"279.83"},{"v":263.878670857926,"d":"263.88"},{"v":327.431078478348,"d":"327.43"},{"v":266.491023499043,"d":"266.49"},{"v":209.746612078595,"d":"209.75"},{"v":312.625892823192,"d":"312.63"},{"v":288.646213283395,"d":"288.65"},{"v":250.410394684576,"d":"250.41"},{"v":287.162758767081,"d":"287.16"},{"v":276.434455983664,"d":"276.43"},{"v":287.807564067759,"d":"287.81"},{"v":835.824556446252,"d":"835.82"},{"v":782.669621561787,"d":"782.67"},{"v":678.326023091754,"d":"678.33"},1264.83,{"v":1133.26709821217,"d":"1133.27"},{"v":1000.74520502623,"d":"1000.75"},{"v":1419.59935734907,"d":"1419.60"},{"v":934.443952745634,"d":"934.44"},{"v":1035.95683150766,"d":"1035.96"},{"v":1211.74773490963,"d":"1211.75"},{"v":1162.20132288732,"d":"1162.20"},{"v":987.795611608292,"d":"987.80"},{"v":1218.46975097054,"d":"1218.47"},{"v":829.336325390332,"d":"829.34"},{"v":951.164906299538,"d":"951.16"},{"v":838.086534964977,"d":"838.09"},{"v":826.937499431927,"d":"826.94"},{"v":764.627308159692,"d":"764.63"},{"v":707.727079974343,"d":"707.73"},{"v":923.870941679417,"d":"923.87"},{"v":958.557606143484,"d":"958.56"},{"v":993.306740997915,"d":"993.31"},{"v":893.099418728267,"d":"893.10"},{"v":1008.79239942979,"d":"1008.79"},{"v":1084.52706463307,"d":"1084.53"},{"v":874.630069207213,"d":"874.63"},{"v":701.101856768632,"d":"701.10"},{"v":823.98859460611,"d":"823.99"},{"v":679.830888498475,"d":"679.83"},{"v":1026.19103263485,"d":"1026.19"},{"v":1224.19045504615,"d":"1224.19"},{"v":1025.61162868901,"d":"1025.61"},{"v":933.517971168486,"d":"933.52"},{"v":886.232694460453,"d":"886.23"},{"v":873.492730700782,"d":"873.49"},{"v":1022.59422323327,"d":"1022.59"},{"v":1007.47494666768,"d":"1007.47"},{"v":1092.5665675729,"d":"1092.57"},{"v":1009.57071890313,"d":"1009.57"},{"v":1067.51344609997,"d":"1067.51"},{"v":1016.26098604185,"d":"1016.26"},{"v":759.121754456858,"d":"759.12"},{"v":631.05790866991,"d":"631.06"},{"v":597.972259485308,"d":"597.97"},368.71,379.61,275.76,515.78,408.79,{"v":373.3,"d":"373.30"},321.07,268.65,219.34,427.67,394.31,356.42,1003.56,775.94,941.18,{"v":839.1,"d":"839.10"},803.93,845.61,725.14,629.45,815.48,770.57,627.19,789.61,575.23,556.44,593.76,560.37,534.85,573.81,577.22,497.61,627.14,545.95,{"v":600.3,"d":"600.30"},653.51,746.02,781.32,869.47,754.56,773.65,818.66,655.67,685.28,734.32,610.42,{"v":714.7,"d":"714.70"},802.31,{"v":696.5593078751166,"d":"696.56"},{"v":289.7405890065467,"d":"289.74"},{"v":41.59596831609537,"d":"41.60"}]
[]
[null,null,"REFERENCE","this work",{"$nulls":17},1,null,null,"this work",{"$nulls":4},1,null,null,"this work",{"$nulls":5},1,{"$nulls":5},"this work",null,null,1,null,null,"this work",null,null,1,{"$nulls":11},"this work",{"$nulls":14},2,{"$nulls":11},"this work",null,null,2,{"$nulls":8},"this work",null,null,2]
[]
[]
["References"]
[1,"Rosli, H. et al. Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity. Genome Biol 14, R139 (2013)."]
[2,"Pombo, M. A. et al. Transcriptomic analysis reveals tomato genes whose expression is induced specifically during effector-triggered immunity and identifies the Epk1 protein kinase which is required for the host response to three bacterial effector proteins. Genome Biol 15, 492, doi:10.1186/s13059-014-0492-1 (2014)."]