exampleConditionDesignTable     package:designGG     R Documentation

_E_x_a_m_p_l_e _C_o_n_d_i_t_i_o_n_D_e_s_i_g_n_T_a_b_l_e _d_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     'exampleConditionDesignTable':  Example data of
     'exampleConditionDesignTable' for a hypothetical  dual-channel
     microarray experiment in which there are 100 strains (e.g.
     recombinant  inbred lines ) and 27 arrays available. Two
     environmental factors  (temperature and cell type) are considered
     in this experiment. There are three  levels for temperature (15,
     24 and 29) and four levels for cell types (A, B, C, D). This table
     tells how to allocate samples into 12 (=3$\times$4) different
     conditions.  On average there are 4.5 (27$\times$2/12) samples per
     condition. 


     > data(exampleConditionDesignTable)
     > exampleConditionDesignTable[1:5,] 

                   Temperature  Cell Type                      Selected Strains                
       condition1      15           A      Strain28  Strain81      Strain18      Strain61      
       condition2      24           A      Strain72  Strain40      Strain83      Strain44  Strain10
       condition3      29           A      Strain22  Strain89      Strain3       Strain30  Strain58
       condition4      15           B      Strain70  Strain47      Strain4       Strain59      
       condition5      24           B      Strain93  Strain97      Strain49      Strain14      

_U_s_a_g_e:

     data(exampleConditionDesignTable)

_F_o_r_m_a_t:

     'exampleConditionDesignTable': 12 combination of conditions from
     three  temepratures and four cell types.

_A_u_t_h_o_r(_s):

     Yang Li <yang.li@rug.nl>, Gonzalo Vera
     <gonzalo.vera.rodriguez@gmail.com> 
      Rainer Breitling <r.breitling@rug.nl>, Ritsert Jansen
     <r.c.jansen@rug.nl>

