pairLevel              package:designGG              R Documentation

_P_a_i_r _l_e_v_e_l_s _f_o_r _p_a_i_r_e_d _R_I_L_s (_o_r _s_t_r_a_i_n_s)

_D_e_s_c_r_i_p_t_i_o_n:

     Pair levels for two RILs (or strains) allocated into one slide
     ('bTwoColorArray=T'). It  is a subfunction needed for
     'designScore' function, but is not directly used.

_U_s_a_g_e:

       pairLevel( xxx, rilNames )

_A_r_g_u_m_e_n_t_s:

     xxx: can be 'genotype.level', 'condition.level' or
          'interaction.level' 

rilNames: names for all RILs (or strains) that have been selected for
          the experiment 

_D_e_t_a_i_l_s:

     This function is used only for two-color array.

_A_u_t_h_o_r(_s):

     Yang Li <yang.li@rug.nl>, Gonzalo Vera
     <gonzalo.vera.rodriguez@gmail.com> 
      Rainer Breitling <r.breitling@rug.nl>, Ritsert Jansen
     <r.c.jansen@rug.nl>

_R_e_f_e_r_e_n_c_e_s:

     Y. Li, R. Breitling and R.C. Jansen. Generalizing genetical
     genomics: the added value from environmental perturbation, Trends
     Genet (2008) 24:518-524. 
      Y. Li, M. Swertz, G. Vera, J. Fu, R. Breitling, and R.C. Jansen.
     designGG: An R-package and Web tool for the optimal design of
     genetical genomics experiments. (submitted) 
      http://gbic.biol.rug.nl/designGG

_S_e_e _A_l_s_o:

     See Also 'designScore'

