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["A) Candidate CNVs of < 50 consecutive SNPs identified by at least 2 distinct copy number analysis methods"]
[]
["Sample ID","Aberration type","Chromosome","Contig* Start SNP ID","Contig Start Position (bp)","Contig End SNP ID","Contig End Position (bp)","Contig Length (bp)","% of overlap (bp) among CNVs in contig","Number of methods found CNV within contig","Number of SNPs in contig","Number of heterozygous SNPs in contig","False positive deletion (F)","CNAG Ref2 Xba","CNAG Ref2 Hind","CNAG Ref50 Xba","CNAG Ref50 Hind","CNAG-GLAD Ref2 Xba","CNAG-GLAD Ref2 Hind","CNAG-GLAD Ref50 Xba","CNAG-GLAD Ref50 Hind","dChip Ref50 Xba","dChip Ref50 Hind","dChip Ref214 Xba","dChip Ref214 Hind","dChip-GLAD Ref50 Xba","dChip-GLAD Ref50 Hind","dChip-GLAD Ref214 Xba","dChip-GLAD Ref214 Hind","CNAT-GLAD Ref50 Xba","CNAT-GLAD Ref50 Hind","CNAT-GLAD Ref106 Xba","CNAT-GLAD Ref106 Hind","CNAT-GLAD Ref214 Xba","CNAT-GLAD Ref214 Hind"]
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[]
["*Contig here means a region of overlapping candidate CNVs identified from the same individual by at least two distinct software/reference set combinations."]