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["Additional file 1.  A list of taxa used for phylogenetic analyses in this study"]
["Subphylum","Order","Species","Sample number","Locality","DDBJ/EMBL/GenBank accession number"]
[{"$nulls":5},"DPD1","RPB1","RPB2"]
[]
["Chelicerata","Opiliones","Psathyropus tenuipes",42,"Yatsukami, Hamamura Kaigan, Tottori, Japan","AB811978","AB811992","AB812006"]
[null,"Acari","Ixodes scapularis",null,null,"XM_002399417*","DS725348*","DS979207*"]
["Myriapoda","Scutigeromorpha","Thereuonema tuberculata",9,"Yodo River, Torikaishimo, Settsu, Osaka, Japan","AB811979","AB811993","AB812007"]
["Crustacea","Cyclopoida","Cyclops vicinus",12,"Yahagi River, Kawashima-cho, Anjo, Aichi, Japan","AB811980","AB811994","AB812008"]
[null,"Stomatopoda","Oratosquilla oratoria",88,"purchased from Osaka Prefectural Central Wholesale Market, Japan","AB811981","AB811995","AB812009"]
[null,"Decapoda","Procambarus clarkii","E-33","Higashino, Matsuyama, Ehime, Japan","AB811982","AB811996","AB812010"]
[null,"Diplostraca","Daphnia pulicaria",36,"Takiwaki-cho, Toyota, Aichi, Japan","AB811983","AB811997","AB812011"]
[null,"Notostraca","Triops granarius","E-54","Saijo, Ehime, Japan","AB811984","AB811998","AB812012"]
[null,"Anostraca","Branchinella kugenumaensis",97,"Kataoka-cho, Kusatsu, Shiga, Japan","AB811985","AB811999","AB812013"]
["Hexapoda","Protura","Baculentulus morikawai",4,"Takamatsu Mt., Aina, Atsugi, Kanagawa, Japan","AB811986","AB812000","AB812014"]
[null,null,"Nipponentomon nippon",3,"Takamatsu Mt., Aina, Atsugi, Kanagawa, Japan","AB811987","AB812001","AB812015"]
[null,"Collembola","Bourletiella hortensis",62,"Sugadaira, Ueda, Nagano, Japan","AB811988","AB812002","AB812016"]
[null,null,"Tomocerus sp.","E-82","Kumakogen, Ehime, Japan","AB811989","AB812003","AB812017"]
[null,null,"Folsomia candida",1,"purchased from Sphero Aqua (Hamamatsu, Shizuoka, Japan)","AB811990","AB812004","AB812018"]
[null,"Diplura","Occasjapyx japonicus",63,"Saiki, Tsukuba, Ibaraki, Japan","AB811991","AB812005","AB812019"]
[null,null,"Metriocampa sp.",44,"Hokiya Mt., Ueda, Nagano, Japan","AB598692","AB596891","AB597582"]
[null,null,"Lepidocampa weberi",54,"Shimoda, Shizuoka, Japan","AB598693","AB596892","AB597583"]
[null,"Archaeognatha","Pedetontus unimaculatus",39,"Shiroyama, Shimoda, Shizuoka, Japan","AB598694","AB596893","AB597584"]
[null,null,"Petrobiellus takunagae",41,"Shiroyama, Shimoda, Shizuoka, Japan","AB598695","AB596894","AB597585"]
[null,"Zygentoma","Nipponatelura sp.","66-1","Shimoda, Shizuoka, Japan","AB598696","AB596895","AB597586"]
[null,null,"Thermobia domestica",2,"provided by Dr. Teruyuki Niimi","AB598697","AB596896","AB597587"]
[null,null,"Isolepisma japonica",46,"Shirahama, Wakayama, Japan","AB598698","AB596897","AB597588"]
[null,"Odonata","Epiophlebia superstes",29,"Kibune River, Sakyo-ku, Kyoto, Japan","AB598699","AB596898","AB597589"]
[null,null,"Mnais pruinosa pruinosa",31,"Kibune River, Sakyo-ku, Kyoto, Japan","AB598700","AB596899","AB597590"]
[null,"Ephemeroptera","Ephemera japonica","E-4","Oino-machi, Matsuyama, Ehime, Japan","AB598701","AB596900","AB597591"]
[null,null,"Isonychia japonica","68-1","Akuta River, Onoharaizuriha-cho, Nishikyo-ku, Kyoto, Japan","AB598702","AB596901","AB597592"]
[null,"Phasmatodea","Phraortes illepidus","E-37","Kamihayashi, Toon, Ehime, Japan","AB598703","AB596902","AB597593"]
[null,"Embioptera","Aposthonia japonica","85-1","Korimoto, Kagoshima, Japan","AB598704","AB596903","AB597594"]
[null,"Grylloblattodea","Galloisiana yuasai","153-1","Norikura Highlands, Adumi, Matsumoto, Nagano, Japan","AB598705","AB596904","AB597595"]
[null,"Mantophasmatodea","Karoophasma biedouwensis","157a","Namaqualand, South Africa","AB598706","AB596905","AB597596"]
[null,"Orthoptera","Patanga japonica",11,"Yodo River, Torikaishimo, Settsu, Osaka, Japan","AB598707","AB596906","AB597597"]
[null,null,"Euconocephalus varius",7,"Yodo River, Torikaishimo, Settsu, Osaka, Japan","AB598708","AB596907","AB597598"]
[null,null,"Teleogryllus emma","E-57","Kamo River, Furukawaotsu, Saijyo, Ehime, Japan","AB598709","AB596908","AB597599"]
[null,"Plecoptera","Oyamia lugubris","E-67","Higashigawa-machi, Matsuyama, Ehime, Japan","AB598710","AB596909","AB597600"]
[null,"Dermaptera","Euborellia plebeja",10,"Yodo River, Torikaishimo, Settsu, Osaka, Japan","AB598711","AB596910","AB597601"]
[null,null,"Forficula hiromasai","O-52","Oppa Mt., Nakijin, Okinawa, Japan","AB598712","AB596911","AB597602"]
[null,"Zoraptera","Zorotypus sp.","154-1","Lata Iskandar, Cameron Highlands, Malaysia","AB598713","AB596912","AB597603"]
[null,"Mantodea","Tenodera aridifolia","E-65","Mizonobe-machi, Matsuyama, Ehime, Japan","AB598714","AB596913","AB597604"]
[null,"\"Blattaria\"","Blattella nipponica",14,"Kanmakiyamate-cho, Takatsuki, Osaka, Japan","AB598715","AB596914","AB597605"]
[null,"Isoptera","Reticulitermes speratus","E-75","Tarumi, Matsuyama, Ehime, Japan","AB598716","AB596915","AB597606"]
[null,"Thysanoptera","Thrips palmi","E-63","Shimoidai-machi, Matsuyama, Ehime, Japan","AB598717","AB596916","AB597607"]
[null,null,"Gynaikothrips ficorum","O-26","Miyagi-jima, Yonashirouehara, Uruma, Okinawa, Japan","AB598718","AB596917","AB597608"]
[null,"Hemiptera","Cryptotympana facialis",49,"Murasaki-cho, Takatsuki, Osaka, Japan","AB598719","AB596918","AB597609"]
[null,null,"Anacanthocoris striicornis",6,"Misawa-cho, Ibaraki, Osaka, Japan","AB598720","AB596919","AB597610"]
[null,null,"Bemisia tabaci","109-2","Syakudo, Habikino, Osaka, Japan","AB598721","AB596920","AB597611"]
[null,null,"Uroleucon nigrotuberculatum",73,"Hagitani, Takatsuki, Osaka, Japan","AB598722","AB596921","AB597612"]
[null,"Psocoptera","Metylophorus sp.","E-43","Kamihayashi, Toon, Ehime, Japan","AB598723","AB596922","AB597613"]
[null,"Phthiraptera","Pediculus humanus",null,null,"http://phumanus.vectorbase.org/index.php*"]
[null,"Hymenoptera","Neocolochelyna itoi","E-35","Kamihayashi, Toon, Ehime, Japan","AB598724","AB596923","AB597614"]
[null,null,"Vespa analis insularis","E-76","Tarumi, Matsuyama, Ehime, Japan","AB598725","AB596924","AB597615"]
[null,null,"Nasonia vitripennis",null,null,"XM_001606307*","AAZX01004905*","XM_001607852*"]
[null,"Megaloptera","Protohermes grandis","E-74","Higashigawa-machi, Matsuyama, Ehime, Japan","AB598726","AB596925","AB597616"]
[null,"Raphidioptera","Inocellia japonica",115,"Hatadera, Matsuyama, Ehime, Japan","AB598727","AB596926","AB597617"]
[null,"Neuroptera","Chrysoperla nipponensis",87,"Sakae-machi, Takatsuki, Osaka, Japan","AB598728","AB596927","AB597618"]
[null,"Strepsiptera","Stichotrema asahinai","91-2","Syurisueyoshi-cho, Naha, Okinawa, Japan","AB598729","AB596928","AB597619"]
[null,"Coleoptera","Eretes sticticus","E-53","Saijyo, Ehime, Japan","AB598730","AB596929","AB597620"]
[null,null,"Lucidina biplagiata","E-19","Higashino, Matsuyama, Ehime, Japan","AB598731","AB596930","AB597621"]
[null,null,"Tribolium castaneum",null,null,"XM_962197*","XM_968377*","XM_969560*"]
[null,"Lepidoptera","Papilio polytes",5,"Okinawa-jima, Okinawa, Japan","AB598732","AB596931","AB597622"]
[null,"Trichoptera","Stenopsyche marmorata","E-68","Higashigawa-machi, Matsuyama, Ehime, Japan","AB598733","AB596932","AB597623"]
[null,"Diptera","Anopheles gambiae",null,null,"XM_320778*","XM_317690*","XM_313416*"]
[null,null,"Drosophila melanogaster",null,null,"X88928*","NM_078569*","BT003265*"]
[null,"Mecoptera","Panorpa takenouchii","E-34","Kamihayashi, Toon, Ehime, Japan","AB598734","AB596933","AB597624"]
[null,"Siphonaptera","Ctenocephalides felis",53,"Shimogamo, Sakyo-ku, Kyoto, Japan","AB598735","AB596934","AB597625"]
[]
["* The sequence data were retrieved from GenBank database"]