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["Additional file 3. GO categories enriched with PS genes in Shewanellaceae and Vibrionaceae *. "]
["Biological Process","GO","SS9","tot","p value","KT99","tot","p value"]
["cell motility; ciliary or flagellar motility","0006928; 0001539",5,22,{"v":0.055400000000000005,"d":"0.055"},"-","-","-"]
["establishment of localization; localization","0051234; 0051179",42,315,{"v":0.0129,"d":"0.013"},12,217,{"v":0.0044,"d":"0.004"}]
["gas transport; oxygen transport","0015669; 0015671","-","-","-",1,2,0.049]
["localization of cell; locomotion","0051674; 0040011",5,22,{"v":0.055400000000000005,"d":"0.055"},"-","-","-"]
["molybdate ion transport","0015689","-","-","-",1,2,0.049]
["nucleoside monophosphate biosynthesis; metabolism","0009124; 0009123","-","-","-",2,10,{"v":0.0238,"d":"0.024"}]
["nutrient import","0009935","-","-","-",1,2,0.049]
["oxidoreduction coenzyme metabolism","0006733",4,15,{"v":0.0504,"d":"0.050"},"-","-","-"]
["protein folding","0006457",5,22,{"v":0.055400000000000005,"d":"0.055"},"-","-","-"]
["protein transport","0015031",6,27,{"v":0.0408,"d":"0.041"},"-","-","-"]
["purine nucleoside monophosphate biosynthesis; metabolism","0009127; 0009126","-","-","-",2,7,{"v":0.011600000000000001,"d":"0.012"}]
["purine ribonucleoside monophosphate biosynthesis; metabolism","0009168; 0009167","-","-","-",2,7,{"v":0.011600000000000001,"d":"0.012"}]
["ribonucleoside monophosphate biosynthesis; metabolism","0009124; 0009123","-","-","-",2,9,{"v":0.0194,"d":"0.019"}]
["serine family amino acid biosynthesis","0009070","-","-","-",2,14,{"v":0.045200000000000004,"d":"0.045"}]
["serine family amino acid metabolism","0009069","-","-","-",3,22,{"v":0.015700000000000002,"d":"0.016"}]
["siderophore transport","0015891","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["transport","0006810","-","-","-",12,171,{"v":0.0005,"d":"0.001"}]
["Cellular Component","GO","SS9","tot","p value","KT99","tot","p value"]
["flagellum; cell projection","0019861; 0042995",6,29,{"v":0.06,"d":"0.060"},"-","-","-"]
["glycine cleavage complex","0005960","-","-","-",1,2,0.049]
["glycine dehydrogenase complex (decarboxylating)","0005961","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["membrane","0016020","-","-","-",13,300,{"v":0.023100000000000002,"d":"0.023"}]
["phosphoribosylaminoimidazole carboxylase complex","0009320","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["pyruvate dehydrogenase complex","0045254","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["Molecular Function","GO","SS9","tot","p value","KT99","tot","p value"]
["adenosine deaminase activity","0004000","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["adenylylsulfate kinase activity","0004020","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["aspartate carbamoyltransferase activity","0004070","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["carboxyl- and carbamoyltransferase activity","0016743","-","-","-",1,2,0.049]
["cation:amino acid symporter activity","0005416","-","-","-",1,2,0.049]
["chaperone regulator activity","0030188",2,2,{"v":0.0094,"d":"0.009"},"-","-","-"]
["cis-trans isomerase activity","0016859",2,3,{"v":0.026500000000000003,"d":"0.027"},"-","-","-"]
["cyclo-ligase activity","0016882",2,2,{"v":0.0094,"d":"0.009"},1,2,0.049]
["dethiobiotin synthase activity","0004141","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["di-, tri-valent inorganic cation transporter activity","0015082","-","-","-",2,7,{"v":0.011600000000000001,"d":"0.012"}]
["dihydrodipicolinate synthase activity","0008840","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["dihydrolip. acyltransferase activity; dihydrolip. Transferase activity","0030523; 0004742","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["glycine dehydrogenase (decarboxylating) activity","0004375","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["GTPase activity","0003924",2,4,{"v":0.049600000000000005,"d":"0.050"},"-","-","-"]
["inositol or phosphatidylinositol phosphatase activity","0004437","-","-","-",1,2,0.049]
["ion transporter activity","0015075","-","-","-",4,52,{"v":0.037200000000000004,"d":"0.037"}]
["iron ion transporter activity","0005381","-","-","-",2,4,{"v":0.0035,"d":"0.004"}]
["metal ion transporter activity","0046873","-","-","-",2,7,{"v":0.011600000000000001,"d":"0.012"}]
["methylated-DNA-[protein]-cysteine S-methyltransferase activity","0003908","-","-","-",1,2,0.049]
["molybdate ion transporter activity","0015098","-","-","-",1,2,0.049]
["nucleobase transporter activity; nucleoside transporter activity","0015932; 0005337","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["nucleoside kinase activity","0019206",2,2,{"v":0.0094,"d":"0.009"},"-","-","-"]
["oxidoreductase activity, acting on paired donors","0016706","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["oxidoreductase activity, acting on the CH-NH2 group of donors","0016642","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["peptidyl-prolyl cis-trans isomerase activity","0003755",2,3,{"v":0.026500000000000003,"d":"0.027"},"-","-","-"]
["phosphoribosylaminoimidazole carboxylase activity","0004638","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["purine-nucleoside phosphorylase activity","0004731",2,2,{"v":0.0094,"d":"0.009"},"-","-","-"]
["S-acetyltransferase activity","0016418","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["siderophore transporter activity; siderophore-iron transporter activity","0042927; 0015343","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
["sodium:amino acid symporter activity","0005283","-","-","-",1,2,0.049]
["transporter activity","0005215","-","-","-",12,169,{"v":0.0005,"d":"0.001"}]
["tRNA isopentenyltransferase activity","0004811","-","-","-",1,1,{"v":0.024800000000000003,"d":"0.025"}]
[]
["Columns represent respectively: functional classes, GO codes, number of PS genes for each category, total number of orthologous genes for each category and p-value calculated using GoMiner software for Shewanellaceae (columns 3, 4, 5) and Vibrionaceae (columns 6, 7, 8). In bold are highlighted the significant values and the gray background indicates the enriched classes both in Shevanellaceae and Vibrionaceae. Asterisk indicates that  functional class names have been shortened, please refer to the GO code to recover the correct annotation term."]