Annotations for 518 loblolly pine SSR, ESTP and RFLP marker sequences.

Additional File 8

Unless otherwise noted in the Notes column, the NCBI UniGene assignment is based on the listed GenBank Acc and the reference protein assignment is based on the blastx similarity of a UniGene's uniq sequence to a RefSeq protein.

All reference protein assignments are based on 45% or greater amino acid identity. ref| = RefSeq protein database; gb| = GenBank protein database; n/a = not applicable, not available or unknown.

Marker ID	GenBank Acc	species	clone ID	UniGene cluster ID	[GO ID] GO term	GO ontology	GO lineage level-3	GO lineage level-4	GO lineage level-5	reference protein	reference protein annotation [species]	marker type	P. taeda map status	Notes
estPaINR_PAXY13_a	gb\|EX438659	Picea glauca	GQ04008_I01	Pta.584	[GO:0015250] water channel activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_195236	aquaporin, plasma membrane intrinsic protein 3 [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CV033572; Score = 1291 bits (699), Expect = 0.0, Identities = 790/835 (94%), Gaps = 2/835 (0%).
estPmaLU_SB12_a	gb\|AF051208	Picea mariana	n/a	Pta.2976	[GO:0003730] mRNA 3'-UTR binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003723] RNA binding	ref\|NP_564018	oligouridylate binding protein 1B [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR070859; Score = 913 bits (494), Expect = 0.0, Identities = 634/697 (90%), Gaps = 27/697 (3%).
estPmaLU_SB32_a	gb\|AF124749	Picea glauca	n/a	n/a	[GO:0051726] regulation of cell cycle	biological_process	[GO:0009987] cellular process	[GO:0007049] cell cycle	[GO:0051726] regulation of cell cycle	ref\|NP_001053564	cyclin [Oryza sativa]	ESTP	mapped	RefSeq protein assignment is based on blastx similarity to the Picea glauca seq. gb\|AF124749. Score = 45.4 bits (106), Expect = 0.003, Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 0/39 (0%).
estPmaLU_SB41_a	gb\|AF051231	Picea mariana	n/a	Pta.5104	[GO:0008308] voltage-gated anion channel activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_001049975	porin 3, Eukaryotic porin family [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO199564; Score = 928 bits (502), Expect = 0.0, Identities = 583/622 (93%), Gaps = 6/622 (0%).
estPmaLU_SB49_a	gb\|AF051235	Picea mariana	n/a	Pta.4351	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_564061	unknown protein [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR385657; Score = 1079 bits (584), Expect = 0.0, Identities = 732/804 (91%), Gaps = 8/804 (0%).
estPmaLU_SB58_a	gb\|AF051242	Picea mariana	n/a	Pta.317	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001045083	60S ribosomal protein L5 [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR013771; Score = 658 bits (356), Expect = 0.0, Identities = 477/534 (89%), Gaps = 13/534 (2%).
estPpINR_AS01C10-1_a	gb\|AL749809	Pinus pinaster	AS01C10	Pta.18353	[GO:0042411] beta-carotene hydroxylase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0004497] monooxygenase activity	ref\|NP_200070	beta-carotene hydroxylase 2 [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR021701; Score = 822 bits (445), Expect = 0.0, Identities = 536/574 (93%), Gaps = 30/574 (5%).
estPpINR_RN01G04_a	gb\|AL750371	Pinus pinaster	RN01G04	Pta.905	[GO:0004674] protein serine/threonine kinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_001058752	casein kinase II alpha subunit [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DT627165; Score = 682 bits (369), Expect = 0.0, Identities = 377/381 (98%), Gaps = 0/381 (0%).
estPtIFG_107_a	gb\|H75114	Pinus taeda	0107J	Pta.576	[GO:0015078] hydrogen ion transmembrane transporter activity	molecular_function	[GO:0005215] transporter activity	[GO:0022892] substrate-specific transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_194953	ATP synthase family [Arabidoposis thaliana]	ESTP	mapped
estPtIFG_149_a	gb\|H75240	Pinus taeda	0149e	Pta.1913	[GO:0004034] aldose 1-epimerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016854] racemase and epimerase activity	ref\|NP_200543	aldose 1-epimerase family protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_464_a	gb\|H75150	Pinus taeda	0464e	Pta.584	[GO:0015250] water channel activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_195236	aquaporin, plasma membrane intrinsic protein 3 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_500_a	gb\|H75151	Pinus taeda	0500e	Pta.11539	[GO:0005507] copper ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_173459	DNA-damage-repair/toleration protein 112, plastocyanin, chloroplast precursor [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_624_a	gb\|H75105	Pinus taeda	0624M	Pta.11566	[GO:0016301] kinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_567945	calcium dependent protein serine/threonine kinase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_674_a	gb\|CO160324	Pinus taeda	FLD1_20_F03_A029	Pta.11669	[GO:0003755] peptidyl-prolyl cis-trans isomerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016859] cis-trans isomerase activity	ref\|NP_180557	peptidyl-prolyl cis-trans isomerase, cyclophilin [Arbidopsis thaliana]	ESTP	mapped	Sequence of Pinus taeda clone 0674 is not available. STS primers match Pinus taeda EST gb\|CO160324.
estPtIFG_739_a	gb\|DR743097	Pinus taeda	RTCU1_13_C02_A029	Pta.2876	[GO:0004630] phospholipase D activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016788] hydrolase activity, acting on ester bonds	ref\|NP_188194	phospholipase D alpha 1 [Arabidopsis thaliana]	ESTP	mapped	Sequence of Pinus taeda clone 0739 is not available. STS primers match Pinus taeda EST gb\|DR743097.
estPtIFG_893_a	gb\|CO361162	Pinus taeda	NDL2_3_D09_A029	Pta.72	[GO:0008289] lipid binding	molecular_function	[GO:0005488] binding	[GO:0008289] lipid binding	[Lineage ends at prior level]	gb\|AAA82182	nonspecific lipid-transfer protein [Pinus taeda]	ESTP	mapped	Sequence of Pinus taeda clone 0893 is not available. STS primers match Pinus taeda EST gb\|CO361162. UniGene assignment is based on gb\|CO361162.
estPtIFG_1454_a	gb\|H75120	Pinus taeda	1454J	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_1576_a	gb\|DR681980	Pinus taeda	PWAA474	Pta.22195	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped	Sequence of Pinus taeda clone 1576 is not available. STS primers match Pinus taeda EST gb\|DR681980. UniGene assignment is based on gb\|DR681980.
estPtIFG_1643_a	gb\|H75191	Pinus taeda	1643e	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_1750_a	gb\|H75022	Pinus taeda	1750s	Pta.1650	[GO:0009055] 2 iron, 2 sulfur cluster binding	molecular_function	[GO:0005488] binding	[GO:0051540] metal cluster binding	[GO:0051536] iron-sulfer cluster binding	ref\|NP_172565	ferredoxin [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_1934_a	gb\|H75112	Pinus taeda	1934M	Pta.575	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_565786	chlorophyll a/b binding protein, photosystem II [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_1950_a	gb\|H75126	Pinus taeda	1950J	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_1955_a	gb\|H75038	Pinus taeda	1955e	Pta.9950	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001045308	protein kinase C conserved region 2, C2, domain containing protein [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR018615; Score = 281 bits (152), Expect = 6e-75, Identities = 208/233 (89%), Gaps = 12/233 (5%).
estPtIFG_1956_a	gb\|H75039	Pinus taeda	1956s	Pta.5686	[GO:0004842] ubiquitin-protein ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016879] ligase activity, forming carbon-nitrogen bonds	ref\|NP_177189	ubiquitin-protein ligase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_2166_a	gb\|H75060	Pinus taeda	2166s	Pta.515	[GO:0004739] pyruvate dehydrogenase (acetyl-transferring) activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_001048068	pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial precursor [Oryza sativa]	ESTP	mapped
estPtIFG_2290_a	gb\|H75067	Pinus taeda	2290e	Pta.1240	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_192772	chlorophyll a/b binding protein, photosystem II LHCP type II [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_2358_a	gb\|H75088	Pinus taeda	2358e	Pta.11555	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_2615_a	gb\|H75223	Pinus taeda	2615s	Pta.18383	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001060847	unknown protein [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO170994, clone NDL1_18_G08_A029; Score = 839 bits (454), Expect = 0.0, Identities = 466/471 (98%), Gaps = 4/471 (0%).
estPtIFG_2781_a	gb\|H75231	Pinus taeda	2781e	Pta.11561	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_2889_a	gb\|H75234	Pinus taeda	2889e	Pta.2699	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001147703.1	abscisic stress ripening protein 2 [Zea mays]	ESTP	mapped
estPtIFG_4CL_a	gb\|U12012	Pinus taeda	PT4CL1	Pta.423	[GO:0016207] 4-coumarate-CoA ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016877] ligase activity, forming carbon-sulfur bonds	ref\|NP_188761	4-coumarate-CoA ligase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8415_a	gb\|AA739501	Pinus taeda	8419M	Pta.143	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_8429_a	gb\|AA739505	Pinus taeda	8429M	Pta.11727	[GO:0016779] nucleotidyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_175708	cytidylyltransferase family, mitochondrial [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8471_a	gb\|AA739525	Pinus taeda	8471M	Pta.11734	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_8473_a	gb\|AA739526	Pinus taeda	8473M	Pta.204	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_188286	translationally controlled tumor protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8500_a	gb\|AA739539	Pinus taeda	8500M	Pta.11738	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_8531_a	gb\|AA739558	Pinus taeda	8531M	Pta.627	[GO:0003743] translation initiation factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0008135] translation factor activity, nucleic acid binding	ref\|NP_177907	eukaryotic translation initiation factor 5, putative [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8542_a	gb\|AA739566	Pinus taeda	8542M	Pta.11743	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_193557	unknown protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8564_a	gb\|AA739580	Pinus taeda	8564M	Pta.630	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001067062	60S ribosomal protein L2, fragment [Oryza sativa]	ESTP	mapped
estPtIFG_8565_a	gb\|AA739581	Pinus taeda	8565M	Pta.5681	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_198206.1	ATP binding (BIP1) [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8569_a	gb\|AA739585	Pinus taeda	8569M	n/a	[GO:0003924] GTPase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016817] hydrolase activity, acting on acid anhydrides	ref\|XP_002324047	tubulin alpha-7 chain [Populus trichocarpa]	ESTP	mapped	RefSeq protein assignment is based on blastx similarity to Populus trichocarpa RefSeq XP_002324047; Score = 46.2 bits (108), Expect = 9e-04, Identities = 36/44 (81%), Positives = 36/44 (81%), Gaps = 0/44 (0%)
estPtIFG_8580_a	gb\|AA739590	Pinus taeda	8580M	Pta.11747	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_8612_a	gb\|AA739606	Pinus taeda	8612M	Pta.7849	[GO:0009269] response to desiccation	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[GO:0009414] response to water deprivation	ref\|NP_001042461	late embryogenesis abundant protein [Oryza sativa]	ESTP	mapped
estPtIFG_8647_a	gb\|AA739625	Pinus taeda	8647M	Pta.1091	[GO:0015250] water channel activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_001047491	plasma membrane integral protein [Oryza sativa]	ESTP	mapped
estPtIFG_8702_a	gb\|AA739652	Pinus taeda	8702M	Pta.168	[GO:0003756] protein disulfide isomerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016860] intramolecular oxidoreductase activity	ref\|NP_172620	thioredoxin-like 4 protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8725_a	gb\|AA739673	Pinus taeda	8725M	Pta.2	[GO:0005515] protein binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[Lineage ends at prior level]	ref\|NP_199111	constitutive photomorphogenic homolog [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8732_a	gb\|AA739680	Pinus taeda	8732M	Pta.577	[GO:0004749] ribose phosphate diphosphokinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_001047921	phosphoribosyl pyrophosphate synthase isozyme 4 [Oryza sativa]	ESTP	mapped
estPtIFG_8738_a	gb\|AA739685	Pinus taeda	8738M	Pta.4	[GO:0004707] MAP kinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0005057] receptor signaling protein activity	ref\|NP_181907	MAP kinase 6 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8781_a	gb\|AA739709	Pinus taeda	8781M	Pta.11769	[GO:0005478] intracellular transporter activity	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[Lineage ends at prior level]	ref\|NP_191178	alpha-soluble attachment protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8837_a	gb\|AA739754	Pinus taeda	8837M	Pta.7714	[GO:0004713] protein tyrosine kinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_001043164	MAP kinase kinase 1 [Oryza sativa]	ESTP	mapped
estPtIFG_8886_a	gb\|AA739785	Pinus taeda	8886M	Pta.265	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_567346	nucleoside diphosphate kinase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8887_a	gb\|AA739786	Pinus taeda	8887M	Pta.16	[GO:0003899] DNA-directed RNA polymerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_001067421	DNA-directed RNA polymerase II 7.6 kDa polypeptide [Oryza sativa]	ESTP	mapped
estPtIFG_8898_a	gb\|AA739796	Pinus taeda	8898M	Pta.664	[GO:0000166] nucleotide binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[Lineage ends at prior level]	ref\|NP_566644	WD-40 repeat family protein [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8939_a	gb\|AA739822	Pinus taeda	8939M	Pta.88	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_178826	40S ribosomal protein S16 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_8972_a	gb\|AA739836	Pinus taeda	8972M	n/a	[GO:0015250] water channel activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|XP_002521292	aquaporin, PIP2.7 [Ricinus communis]	ESTP	mapped	Reference protein assignment is based on blastx similarity to Ricinus communis RefSeq XP_002521292; Score = 167 bits (422), Expect = 8e-40, Identities = 90/122 (73%), Positives = 97/122 (79%), Gaps = 0/122 (0%)
estPtIFG_9008_a	gb\|AA739854	Pinus taeda	9008M	Pta.642	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_001068410	AAA-ATPase, central region domain [Oryza sativa]	ESTP	mapped
estPtIFG_9022_a	gb\|AA739862	Pinus taeda	9022M	Pta.458	[GO:0003743] translation initiation factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0008135] translation factor activity, nucleic acid binding	ref\|NP_175831	eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9036_a	gb\|AA739871	Pinus taeda	9036M	Pta.2677	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_172977	60S ribosomal protein L37 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9044_a	gb\|AA739876	Pinus taeda	9044M	Pta.8854	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_191670	40S ribosomal protein S27-2 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9053_a	gb\|AA739883	Pinus taeda	9053M	Pta.204	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_188286	translationally controlled tumor protein homolog [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9076_a	gb\|AA739897	Pinus taeda	9076M	Pta.4262	[GO:0004614] phosphoglucomutase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016866] intramolecular transferase activity	ref\|NP_173732	phosphoglucomutase, cytoplasmic [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9092_a	gb\|AA739907	Pinus taeda	9092M	Pta.11	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
estPtIFG_9102_a	gb\|AA739915	Pinus taeda	9102M	Pta.11375	[GO:0005507] copper ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_196158	laccase 12 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9113_a	gb\|AA739924	Pinus taeda	9113M	Pta.746	[GO:0004478] methionine adenosyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups	ref\|NP_188365	methionine adenosyltransferase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9151_a	gb\|AA739953	Pinus taeda	9151M	Pta.468	[GO:0005507] copper ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_001051044	plastocyanin-like domain containing protein [Oryza sativa]	ESTP	mapped
estPtIFG_9156_a	gb\|AA739960	Pinus taeda	9156aM	Pta.109	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001047036	40S ribosomal protein S14 [Oryza sativa]	ESTP	mapped
estPtIFG_9157_a	gb\|AA739961	Pinus taeda	9157M	Pta.671	[GO:0005516] calmodulin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0005516] calmodulin binding	ref\|NP_187204	AAA-ATPase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9164_a	gb\|AA739966	Pinus taeda	9164M	Pta.1604	[GO:0003755] peptidyl-prolyl cis-trans isomerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016859] cis-trans isomerase activity	ref\|NP_179251	rotamase CyP 3, cystolic cyclophilin ABH-like [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_9198_a	gb\|AA739984	Pinus taeda	9198M	Pta.104	[GO:0005516] calmodulin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0005516] calmodulin binding	ref\|NP_001032107	elongation factor 1-alpha [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_C4H-1_a	gb\|AY764813	Pinus taeda	n/a	Pta.6348	[GO:0016710] trans-cinnamate 4-monooxygenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0004497] monooxygenase activity	ref\|NP_180607	trans-cinnamate 4-hydroxylase [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO161408; Score = 1624 bits (879), Expect = 0.0, Identities = 881/882 (99%), Gaps = 0/882 (0%).
estPtIFG_C4H-2_a	gb\|AF096998	Pinus taeda	n/a	Pta.11490	[GO:0016710] trans-cinnamate 4-monooxygenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0004497] monooxygenase activity	ref\|NP_180607	cinnamate-4-hydroxylase [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_COMT-2_a	gb\|DR165351	Pinus taeda	RTPHOS1_4_A06_A029	Pta.11336	[GO:0008171] O-methyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016741] transferase activity, transferring one-carbon groups	ref\|NP_200227	O-methyltransferase 1 [Arabidopsis thaliana]	ESTP	mapped
estPtIFG_lp3-3	gb\|AY867630	Pinus taeda	n/a	Pta.447	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001065841	pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CF390644; Score = 287 bits (155), Expect = 3e-76, Identities = 387/489 (79%), Gaps = 55/489 (11%).
estPtIFG_SAHH_a	gb\|DR745467	Pinus taeda	RTCU1_29_F11_A029	Pta.10148	[GO:0004013] adenosylhomocysteinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016801] hydrolase activity, acting on ether bonds	ref\|NP_193130	adenosylhomocysteinase [Arbidopsis thaliana]	ESTP	mapped
estPtIFG_SB32b_a	gb\|AF051225	Picea mariana	n/a	n/a	[GO:0051726] regulation of cell cycle	biological_process	[GO:0009987] cellular process	[GO:0007049] cell cycle	[GO:0051726] regulation of cell cycle	ref\|NP_001053564	cyclin [Oryza sativa]	ESTP	mapped	RefSeq protein assignment is based on blastx similarity to the Picea mariana seq. gb\|AF051225. Score = 261 bits (667), Expect = 5e-68, Identities = 129/215 (60%), Positives = 161/215 (74%), Gaps = 0/215 (0%).
estPtNCS_22B8_a	gb\|AI812891	Pinus taeda	22B8	Pta.11129	[GO:0004372] glycine hydroxymethyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016741] transferase activity, transferring one-carbon groups	ref\|NP_193129	serine hydroxymethlytransferase 4 [Arabidopsis thaliana]	ESTP	mapped
estPtNCS_22C5_a	gb\|AI812900	Pinus taeda	22C5	Pta.224	[GO:0004512] inositol-3-phosphate synthase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016872] intramolecular lyase activity	ref\|NP_973509	inositol-3-phosphate synthase [Arabidopsis thaliana]	ESTP	mapped
estPtNCS_22C8_a	gb\|AI812903	Pinus taeda	22C8	Pta.9400	[GO:0016688] L-ascorbate peroxidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016684] oxidoreductase activity, acting on peroxide as acceptor	ref\|NP_001030991	L-ascorbate peroxidase 1 [Arabidopsis thaliana]	ESTP	mapped
estPtNCS_23C5_a	gb\|AI813128	Pinus taeda	23C5	Pta.8176	[GO:0016841] ammonia-lyase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016840] carbon-nitrogen lyase activity	ref\|NP_187645	phenylalanine ammonia-lyase 4 [Aribidopsis thaliana]	ESTP	mapped
estPtNCS_2N7G_a	gb\|AA556198	Pinus taeda	2N7G	Pta.10987	[GO:0003924] GTPase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016817] hydrolase activity, acting on acid anhydrides	ref\|NP_171974	tubulin alpha-4 chain [Arabidopsis thaliana]	ESTP	mapped
estPtNCS_6C12A_a	gb\|AA556806	Pinus taeda	6C12A	n/a	[GO:0003924] GTPase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016817] hydrolase activity, acting on acid anhydrides	ref\|NP_001048064	dynamin family protein [Oryza sativa]	ESTP	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 277 bits (708), Expect = 4e-73, Identities = 136/191 (71%), Positives = 164/191 (85%), Gaps = 1/191 (0%).
estPtNCS_6C5A_a	gb\|AA556842	Pinus taeda	6C5A	Pta.4462	[GO:0010283] pinoresinol reductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors	ref\|NP_174490	pinoresinol-lariciresinol reductase, putative [Arabidopsis thaliana]	ESTP	mapped
estPtNCS_6N3C_a	gb\|AA557072	Pinus taeda	6N3C	n/a	[GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016798] hydrolase activity, acting on glycosyl bonds	ref\|NP_177228	glycosyl hydrolase 9B1 [Arabidopsis thaliana]	ESTP	mapped	RefSeq protein assignment is based on blastx similiarity to the GenBank seq.; Score = 95.1 bits (235), Expect = 2e-18, Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 0/86 (0%)
estPtNCS_6N3E_a	gb\|AA557074	Pinus taeda	6N3E	Pta.5807	[GO:0016615] malate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016614] oxidoreductase activity, acting on CH-OH group of donors	ref\|NP_171936	malate dehydrogenase, cytoplasmic 1 [Aribidopsis thaliana]	ESTP	mapped
estPtNCS_CCoAOMT_a	gb\|AF036095	Pinus taeda	n/a	Pta.11406	[GO:0008171] O-methyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016741] transferase activity, transferring one-carbon groups	ref\|NP_195131	caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana]	ESTP	mapped
NZPR0102c	n/a	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0116	n/a	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0143	n/a	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0206	gb\|BV728907	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0269	gb\|BV728908	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0274	gb\|BV728909	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0290	gb\|BV728910	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0300	gb\|BV728911	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0351	gb\|BV728912	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0413	gb\|BV728913	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0440	gb\|BV728914	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0458	gb\|BV728929	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0473	gb\|BV728915	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0563	gb\|BV728916	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0599	gb\|BV728917	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0826	gb\|BV728918	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0917	gb\|BV728919	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0933	gb\|BV728920	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0943	gb\|BV728921	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR0947	gb\|BV728922	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1004	gb\|BV728923	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1078	gb\|BV728924	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1680	gb\|BV728925	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1682	gb\|BV728926	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1699	gb\|BV728927	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
NZPR1702_b	gb\|BV728928	Pinus radiata	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PbRAMS	gb\|U38186	Pinus banksiana	n/a	Pta.11623	[GO:0004478] methionine adenosyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups	ref\|NP_188365	S-adenosylmethionine synthase [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR014448; Score = 1528 bits (827), Expect = 0.0, Identities = 887/914 (97%), Gaps = 12/914 (1%).
PpSIFG_3116	gb\|CT579357	Pinus pinaster	n/a	n/a	[GO:0009228] thiamin biosynthetic process	molecular_function	[GO:0008152] metabolic process	[GO:0044237] cellular metabolic process	[GO:0006766] vitamin metabolic process	ref\|NP_001059841	thiazole biosynthetic enzyme 1-1, chloroplast precorsor [Oryza sativa]	SSR	not mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 275 bits (702), Expect = 2e-72, Identities = 134/158 (84%), Positives = 147/158 (93%), Gaps = 0/158 (0%).
PpSIFG_3129	gb\|BX680424	Pinus pinaster	RS43C10	Pta.617	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001055941	ethylene responsive element DNA binding factor 5 [Oryza sativa]	SSR	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CX715090; Score = 721 bits (390), Expect = 0.0, Identities = 416/428 (97%), Gaps = 4/428 (0%).
PpSIFG_3145	gb\|BX254108	Pinus pinaster	PP093E03	Pta.14877	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR116962.
PpSIFG_3147	gb\|BX254283	Pinus pinaster	PP096B11	Pta.13015	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_199801	unknown protein [Arabidopsis thaliana]	SSR	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR012612; Score = 1051 bits (569), Expect = 0.0, Identities = 633/662 (95%), Gaps = 12/662 (1%).
PpSIFG_3168	gb\|BX679043	Pinus pinaster	RS18H03	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PrCHS1	gb\|U90341	Pinus radiata	pAW192	n/a	[GO:0008415] acyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_171707	chalcone and stilbene synthase family protein [Arabidopsis thaliana]	ESTP	mapped	RefSeq protein assignment is based on blastx similiarity to the GenBank seq.; Score = 84.0 bits (206), Expect = 3e-14, Identities = 142/211 (67%), Positives = 173/211 (81%), Gaps = 0/211 (0%)
PrE79	gb\|AF049066	Pinus radiata	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped
PrMADS3	gb\|U76726	Pinus radiata	n/a	Pta.1542	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001105692	MADS-box protein [Zea mays]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR058453; Score = 795 bits (430), Expect = 0.0, Identities = 435/437 (99%), Gaps = 1/437 (0%).
PstASU_APX	gb\|AF326783	Pinus strobus	n/a	Pta.4666	[GO:0016688] L-ascorbate peroxidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016684] oxidoreductase activity, acting on peroxide as acceptor	ref\|NP_001105500	ascorbate peroxidase 2 [Zea mays]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR163761; Score = 850 bits (460), Expect = 0.0, Identities = 532/568 (93%), Gaps = 0/568 (0%).
PsUME_Ps3_A	gb\|X58578	Pinus sylvestris	PS3	Pta.145	[GO:0004785] copper, zinc superoxide dismutase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016721] oxidoreductase activity, acting on superoxide radicals as acceptor	ref\|NP_001077494	copper/zinc superoxide dismutase 1 [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR052077; Score = 1319 bits (714), Expect = 0.0, Identities = 774/803 (96%), Gaps = 4/803 (0%).
PsUME_S43_63	n/a	Pinus sylvestris	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PsUPS2_PST13	gb\|X58579	Pinus sylvestris	PST13	Pta.5825	[GO:0004785] copper, zinc superoxide dismutase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016721] oxidoreductase activity, acting on superoxide radicals as acceptor	ref\|NP_001062514	superoxide dismutase [Cu/Zn], chloroplast precursor [Oryza sativa]	ESTP	not mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR163905: Score = 1153 bits (624), Expect = 0.0, Identities = 651/663 (98%), Gaps = 5/663 (0%).
PsyGPD	gb\|L26923	Pinus sylvestris	n/a	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO360904; Score = 1530 bits (828), Expect = 0.0, Identities = 867/885 (97%), Gaps = 5/885 (0%).
PtAGP	gb\|U09554	Pinus taeda	p3H6/CDM8	Pta.102	[GO:0010405] arabinogalactan protein metabolic process	biological_process	[GO:0009987] cellular process	[GO:0070882] cell wall organization or biogenesis	[GO:0044036] cell wall macromolecule metabolic process	gb\|AAA74419	arabinogalactan-like protein [Pinus taeda]	ESTP	mapped
PthCAB	gb\|X13407	Pinus thunbergii	n/a	Pta.4922	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_189406	photosystem II light harvesting complex gene 2.3 [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR023978; Score = 1554 bits (841), Expect = 0.0, Identities = 896/921 (97%), Gaps = 12/921 (1%).
PitaIFG_1A7_6	gb\|AI812330	Pinus taeda	1A7	Pta.2426	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001065841	pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	RFLP	mapped
PitaIFG_2020_1	gb\|H75044	Pinus taeda	2020e	Pta.777	[GO:0004001] adenosine kinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016772] transferase activity, transferring phosphorus-containing groups	ref\|NP_187593	adenosine kinase 1(ADK1) [A. thaliana]	RFLP	mapped
PitaIFG_2361_1	gb\|H75090	Pinus taeda	2361s	Pta.1807	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_176347	chlorophyll a/b binding protein, [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1165_a	gb\|H75179	Pinus taeda	1165e	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	RFLP	mapped
PtIFG_138_A	gb\|H75134	Pinus taeda	0138e	Pta.11535	[GO:0003746] translation elongation factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0008135] translation factor activity, nucleic acid binding	ref\|NP_193769	Rab GTPase homolog E1b [Arabidopsis thaliana]	RFLP	mapped
PtIFG_138_B	gb\|H75135	Pinus taeda	0138s	n/a	[GO:0003746] translation elongation factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0008135] translation factor activity, nucleic acid binding	ref\|NP_001150410	elongation factor Ut [Zea mays]	RFLP	mapped	RefSeq protein assignment is based on blastx similarity to Zea mays RefSeq NP_001150410; Score = 47.0 bits (110), Expect = 5e-04, Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
PtIFG_1454_A	gb\|H75120	Pinus taeda	1454J	Pta.11571	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_1457_A	gb\|H75107	Pinus taeda	1457M	Pta.572	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001066338	unknown protein [Oryza sativa]	RFLP	mapped
PtIFG_149_2	gb\|H75141	Pinus taeda	0149s	Pta.1913	[GO:0004034] aldose 1-epimerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016854] racemase and epimerase activity	ref\|NP_200543	aldose 1-epimerase family protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_149_A	gb\|H75140	Pinus taeda	0149e	Pta.1913	[GO:0004034] aldose 1-epimerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016854] racemase and epimerase activity	ref\|NP_200543	aldose 1-epimerase family protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1588_A	gb\|H75108	Pinus taeda	1588M	Pta.11569	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_1593_21	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_1599	gb\|H75181	Pinus taeda	1599e	Pta.599	[GO:0046933] hydrogen ion transporting ATP synthase activity, rotational mechanism	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_192703	ATP synthase delta chain [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1623_A	gb\|H75100	Pinus taeda	1623T	Pta.573	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_563993	unknown protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1626_c	gb\|H75183	Pinus taeda	1626e	Pta.730	[GO:0005200] structural constituent of cytoskeleton	molecular_function	[GO:0005198] structural molecule activity	[GO:0005200] structural constituent of cytoskeleton	[Lineage ends at prior level]	ref\|NP_001048679	tubulin beta-1 chain 9 [Oryza sativa]	RFLP	mapped
PtIFG_1633_c	gb\|H75186	Pinus taeda	1633s	Pta.5924	[GO:0008137] NADH dehydrogenase (ubiquinone) activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016651] oxidoreductase activity, acting on NADH or NADPH	ref\|NP_001056000	NADH-ubiquinone oxidoreductase 24 kDa mitochondrial precursor [Oryza sativa]	RFLP	mapped
PtIFG_1635_A	gb\|H75110	Pinus taeda	1635M	Pta.591	[GO:0016984] ribulose-bisphosphate carboxylase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016830] carbon-carbon lyase activity	ref\|NP_176880	ribulose bisphosphate carboxylase small chain 1A [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1636_2	gb\|H75187	Pinus taeda	1636s	Pta.478	[GO:0003824] catalytic activity	molecular_function	[GO:0003824] catalytic activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_187837	tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1636_3	gb\|H75187	Pinus taeda	1636s	Pta.478	[GO:0003824] catalytic activity	molecular_function	[GO:0003824] catalytic activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_187837	tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1636_54	gb\|H75187	Pinus taeda	1636s	Pta.478	[GO:0003824] catalytic activity	molecular_function	[GO:0003824] catalytic activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_187837	tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1672_A	gb\|H75193	Pinus taeda	1672e	Pta.2518	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_566244	transmembrane protein, putative [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1869_2	gb\|H75024	Pinus taeda	1869e	Pta.5848	[GO:0008233] peptidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0008233] peptidase activity	ref\|NP_001049162	proteasome subunit alpha type 6 [Oryza sativa]	RFLP	mapped
PtIFG_1889_1	gb\|H75026	Pinus taeda	1889s	Pta.1211	[GO:0047918] GDP-mannose 3,5-epimerase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016853] isomerase activity	[GO:0016854] racemase and epimerase activity	ref\|NP_198236	GDP-mannose 3,5-epimerase [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1902_1	gb\|H75027	Pinus taeda	1902s	Pta.3379	[GO:0005515] protein binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[Lineage ends at prior level]	ref\|NP_001061856	14-3-3-like protein GF14 psi [Oryza sativa]	RFLP	mapped
PtIFG_1916_1	gb\|H75030	Pinus taeda	1916s	Pta.2960	[GO:0031072] heat shock protein binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0031072] heat shock protein binding	ref\|NP_188036	heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1916_2	gb\|H75030	Pinus taeda	1916s	Pta.2960	[GO:0031072] heat shock protein binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0031072] heat shock protein binding	ref\|NP_188036	heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1916_4	gb\|H75030	Pinus taeda	1916s	Pta.2960	[GO:0031072] heat shock protein binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0031072] heat shock protein binding	ref\|NP_188036	heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1917_A	gb\|H75124	Pinus taeda	1917J	Pta.21752	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001077793	30S ribosomal protein 3, putative, plastid-specific [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR110213; Score = 363 bits (196), Expect = 4e-99, Identities = 288/332 (86%), Gaps = 8/332 (2%).
PtIFG_1918_3	gb\|H75111	Pinus taeda	1918M	Pta.84	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	ref\|NP_565719	actin depolymerizing factor 6 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1918_A	gb\|H75102	Pinus taeda	1918T	Pta.84	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	ref\|NP_565719	actin depolymerizing factor 6 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1918_b	gb\|H75102	Pinus taeda	1918T	Pta.84	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	ref\|NP_565719	actin depolymerizing factor 6 [Arabidopsis thaliana]	RFLP	not mapped
PtIFG_1918_f	gb\|H75102	Pinus taeda	1918T	Pta.84	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	ref\|NP_565719	actin depolymerizing factor 6 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1918_h	gb\|H75102	Pinus taeda	1918T	Pta.84	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	ref\|NP_565719	actin depolymerizing factor 6 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_1A2_C	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_1A7_A	gb\|AI812330	Pinus taeda	1A7	Pta.2426	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001065841	pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	RFLP	mapped
PtIFG_1D11_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_1D9_2	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2006_C	gb\|H75042	Pinus taeda	2006s	Pta.4922	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_189406	chlorophyll a/b binding protein, photosystem II [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2009_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2022_A	gb\|H75128	Pinus taeda	2022J	Pta.11545	[GO:0004356] glutamate-ammonia ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016879] ligase activity, forming carbon-nitrogen bonds	ref\|NP_001048045	glutamine synthetase [Oryza sativa]	RFLP	mapped
PtIFG_2068_A	gb\|H75130	Pinus taeda	2068J	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2086_13	gb\|H75047	Pinus taeda	n/a	Pta.5885	[GO:0005498] sterol carrier activity	molecular_function	[GO:0005488] binding	[GO:0008289] lipid binding	[GO:0005496] steroid binding	ref\|NP_001057119	sterol-binding domain containing protein [Oryza sativa]	RFLP	mapped
PtIFG_2086_2	gb\|H75047	Pinus taeda	n/a	Pta.5885	[GO:0005498] sterol carrier activity	molecular_function	[GO:0005488] binding	[GO:0008289] lipid binding	[GO:0005496] steroid binding	ref\|NP_001057119	sterol-binding domain containing protein [Oryza sativa]	RFLP	mapped
PtIFG_2090_1	gb\|H75048	Pinus taeda	2090e	Pta.6038	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_200875	60S ribosomal protein L12 [Arbidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR116803; Score = 267 bits (144), Expect = 1e-7, Identities = 203/227 (89%), Gaps = 22/227 (9%).
PtIFG_2090_2	gb\|H75048	Pinus taeda	2090e	Pta.6038	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_200875	60S ribosomal protein L12 [Arbidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR116803; Score = 267 bits (144), Expect = 1e-7, Identities = 203/227 (89%), Gaps = 22/227 (9%).
PtIFG_2090_4	gb\|H75048	Pinus taeda	2090e	Pta.6038	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_200875	60S ribosomal protein L12 [Arbidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR116803; Score = 267 bits (144), Expect = 1e-7, Identities = 203/227 (89%), Gaps = 22/227 (9%).
PtIFG_2113_1	gb\|H75052	Pinus taeda	2113s	Pta.11554	[GO:0004356] glutamate-ammonia ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016879] ligase activity, forming carbon-nitrogen bonds	ref\|NP_568335	glutamate-ammonia ligase [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2145_1	gb\|H75056	Pinus taeda	2145s	Pta.2729	[GO:0008415] acyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_180232	3-ketoacyl-CoA synthase 11 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2145_28	gb\|H75056	Pinus taeda	2145s	Pta.2729	[GO:0008415] acyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_180232	3-ketoacyl-CoA synthase 11 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2145_3	gb\|H75056	Pinus taeda	2145s	Pta.2729	[GO:0008415] acyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_180232	3-ketoacyl-CoA synthase 11 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2145_76	gb\|H75056	Pinus taeda	2145s	Pta.2729	[GO:0008415] acyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_180232	3-ketoacyl-CoA synthase 11 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2146_2	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2150_A	gb\|H75058	Pinus taeda	2150e	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_2197_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2220_A	n/a	Pinus taeda	n/a	Pta.19510	[GO:0003723] RNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003723] RNA binding	ref\|NP_001045195	glycine-rich RNA binding protein [Oryza sativa]	RFLP	mapped	UniGene assignment is based on blastn similarity of available IFG sequence to Pinus taeda EST gb\|DT626617; Score = 669 bits (362), Expect = 0.0 Identities = 481/560 (85%), Gaps = 2/560 (0%).
PtIFG_2220_B	n/a	Pinus taeda	n/a	Pta.19510	[GO:0003723] RNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003723] RNA binding	ref\|NP_001045195	glycine-rich RNA binding protein [Oryza sativa]	RFLP	mapped	UniGene assignment is based on blastn similarity of available IFG sequence to Pinus taeda EST gb\|DT626617; Score = 669 bits (362), Expect = 0.0 Identities = 481/560 (85%), Gaps = 2/560 (0%).
PtIFG_2253_A	gb\|H75063	Pinus taeda	2253s	Pta.7831	[GO:0004332] fructose-bisphosphate aldolase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016830] carbon-carbon lyase activity	ref\|NP_001041857	fructose-bisphosphate aldolase [Oryza sativa]	RFLP	mapped
PtIFG_2291_A	gb\|H75068	Pinus taeda	2291e	Pta.11549	[GO:0008483] transaminase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016769] transferase activity, transferring nitrogenous groups	ref\|NP_001049852	aminotransferase, class I and II domain [Oryza sativa]	RFLP	mapped
PtIFG_2295_2	gb\|H75069	Pinus taeda	2295s	Pta.590	[GO:0030337] DNA polymerase processivity activity	molecular_function	[GO:0030234] enzyme regulator activity	[GO:0030337] DNA polymerase processivity factor activity	[Lineage ends at prior level]	ref\|NP_172217	proliferating cellular nuclear antigen [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2323_A	gb\|H75072	Pinus taeda	2323e	Pta.11550	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_2361_2	gb\|H75090	Pinus taeda	2361s	Pta.1807	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_176347	chlorophyll a/b binding protein, [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2393_1	gb\|H75095	Pinus taeda	2393s	Pta.18383	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001060847	unknown protein [Oryza sativa]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO172965; Score = 158 bits (85), Expect = 5e-38, Identities = 104/114 (91%), Gaps = 6/114 (5%)
PtIFG_2413_b	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2441_1	n/a	Pinus taeda	n/a	Pta.18257	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_197697	unknown protein [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR017785; Score = 1007 bits (545), Expect = 0.0, Identities = 616/664 (92%), Gaps = 10/664 (1%).
PtIFG_2479_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2530_A	gb\|H75202	Pinus taeda	2530e	Pta.11556	[GO:0004089] carbonate dehydratase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016835] carbon-oxygen lyase activity	ref\|NP_974782	carbonic anhydrase 2 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2538_5	gb\|H75205	Pinus taeda	2538s	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR101900; Score = 174 bits (94), Expect = 9e-43, Identities = 139/159 (87%), Gaps = 16/159 (10%).
PtIFG_2538_B	gb\|H75204	Pinus taeda	2538e	Pta.598	[GO:0008943] glyceraldehyde-3-phosphate dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016903] oxidoreductase activity, acting on the aldehyde or oxo group of donors	ref\|NP_172750	glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2564_A	gb\|H75212	Pinus taeda	2564e	Pta.594	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_001059975	chlorophyll a/b binding protein, LHCP type II [Oryza sativa]	RFLP	mapped
PtIFG_2564_B	gb\|H75213	Pinus taeda	2564e	Pta.594	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_001059975	chlorophyll a/b binding protein, LHCP type II [Oryza sativa]	RFLP	mapped
PtIFG_2568_A	gb\|H75215	Pinus taeda	2568s	Pta.10460	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001049835	40S ribosomal protein S7 [Oryza sativa]	RFLP	mapped
PtIFG_2574_2	gb\|H75216	Pinus taeda	2574e	Pta.575	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_565786	chlorophyll a/b binding protein, photosystem II [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2574_c	gb\|H75217	Pinus taeda	2574s	Pta.575	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_565786	chlorophyll a/b binding protein, photosystem II [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2588_1	gb\|H75218	Pinus taeda	2588e	Pta.11556	[GO:0004089] carbonate dehydratase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016835] carbon-oxygen lyase activity	ref\|NP_974782	carbonic anhydrase 2 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2615_1	gb\|H75223	Pinus taeda	2615s	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_2697_A	gb\|H75226	Pinus taeda	2697e	Pta.7257	[GO:0008026] ATP-dependent helicase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016817] hydrolase activity, acting on acid anhydrides	ref\|NP_199941	DEAD-box protein RNA helicase 35, putative [Arabidopsis thaliana]	RFLP	mapped
PtIFG_2718_1	gb\|H75230	Pinus taeda	2718e	Pta.4966	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_175009	ribosomal protein 1, Arabidopsis, 60S ribosomal protein L3-1, [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DT625372; Score = 237 bits (128), Expect = 1e-61, Identities = 185/208 (88%), Gaps = 22/208 (10%).
PtIFG_2718_2	gb\|H75230	Pinus taeda	2718e	Pta.4966	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_175009	ribosomal protein 1, 60S ribosomal protein L3-1, [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DT625372; Score = 237 bits (128), Expect = 1e-61, Identities = 185/208 (88%), Gaps = 22/208 (10%).
PtIFG_2718_3	gb\|H75230	Pinus taeda	2718e	Pta.4966	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_175009	ribosomal protein 1, Arabidopsis, 60S ribosomal protein L3-1, [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DT625372; Score = 237 bits (128), Expect = 1e-61, Identities = 185/208 (88%), Gaps = 22/208 (10%).
PtIFG_2723_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2723_Aa	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2738_B	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2745_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2782_2	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2782_31	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2802_3	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2885_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2897_d	gb\|H75242	Pinus taeda	2897e	Pta.11468	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_2899_A	gb\|H75245	Pinus taeda	2899s	Pta.4670	[GO:0004842] ubiquitin-protein ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016879] ligase activity, forming carbon-nitrogen bonds	ref\|NP_001046486	ubiquitin conjugating enzyme [Oryza sativa]	RFLP	mapped
PtIFG_2931_A	gb\|H75250	Pinus taeda	2931s	n/a	[GO:0009976] tocopherol cyclase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0009975] cyclase activity	[GO:0009976] tocopherol cyclase activity	ref\|NP_567906	tocopherol cyclase, chloroplast precursor [Arabidopsis thaliana]	RFLP	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 84.7 bits (208), Expect = 1e-15, Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 1/75 (1%).
PtIFG_2933_12	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2957_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2963_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2963_3	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2969_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2986_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2986_B	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_2988_21	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_3006_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_3008_1	gb\|H75259	Pinus taeda	3008s	Pta.1795	[GO:0016020] membrane	cellular_component	[GO:0005623] cell	[GO:0044464] cell part	[GO:00160201] membrane	ref\|NP_001049916	CAP protein family protein [Oryza sativa]	RFLP	mapped
PtIFG_3012_2	gb\|H75261	Pinus taeda	3012e	Pta.1533	[GO:0016630] protochlorophyllide reductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors	ref\|NP_200230	protochlorophyllide reductase A [Arabidopsis thaliana]	RFLP	mapped
PtIFG_3012_3	gb\|H75262	Pinus taeda	3012s	Pta.1533	[GO:0016630] protochlorophyllide reductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors	ref\|NP_200230	protochlorophyllide reductase A [Arabidopsis thaliana]	RFLP	mapped
PtIFG_3021_1	gb\|H75263	Pinus taeda	3021e	Pta.2130	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_001058590	Endoplasmin homolog precursor (GRP94 homolog) [Oryza sativa]	RFLP	not mapped
PtIFG_3026_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_459_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_4D4_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_503_A	gb\|H75154	Pinus taeda	0503s	Pta.586	[GO:0009793] embryonic development ending in seed dormancy	biological_process	[GO:0032502] developmental process	[GO:0009790] embryonic development	[GO:0009793] embryonic development ending in seed dormancy	ref\|NP_567213	maternal effect embryo arrest 49 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_606_1	n/a	Pinus taeda	n/a	Pta.5116	[GO:0008270] zinc ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_001064398	zinc-finger, RING domain containing protein [Oryza sativa]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|CO174714; Score = 730 bits (395), Expect = 0.0, Identities = 427/445 (95%), Gaps = 6/445 (1%).
PtIFG_616	gb\|H75116	Pinus taeda	0616J	Pta.11262	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_653_2	gb\|H75097	Pinus taeda	0653T	Pta.1755	[GO:0046873] metal ion transporter activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_179896	natural resistance-associated macrophage protein 4 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_653_3	gb\|H75097	Pinus taeda	0653T	Pta.1755	[GO:0046873] metal ion transporter activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_179896	natural resistance-associated macrophage protein 4 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_653_d	gb\|H75097	Pinus taeda	0653T	Pta.1755	[GO:0046873] metal ion transporter activity	molecular_function	[GO:0005215] transporter activity	[GO:0022857] transmembrane transporter activity	[GO:0022891] substrate-specific transmembrane transporter activity	ref\|NP_179896	natural resistance-associated macrophage protein 4 [Arabidopsis thaliana]	RFLP	mapped
PtIFG_658_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_66_1	gb\|H75018	Pinus taeda	0066e	Pta.11533	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped
PtIFG_669	gb\|H75159	Pinus taeda	0669s	Pta.11540	[GO:0016168] chlorophyll binding	molecular_function	[GO:0005488] binding	[GO:0046906] tetrapyrrole binding	[GO:0016168] chlorophyll binding	ref\|NP_175092	chlorophyll a/b binding protein, LHCP type II [Arabidopsis thaliana]	RFLP	mapped
PtIFG_719_3	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_719_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_846	gb\|H75117	Pinus taeda	0846J	Pta.5444	[GO:0008453] alanine-glyoxylate transaminase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016769] transferase activity, transferring nitrogenous groups	ref\|NP_001049115	alanine-glyoxylate aminotransferase-like protein [Oryza sativa]	RFLP	mapped
PtIFG_851_1	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtIFG_975_3	gb\|H75119	Pinus taeda	0975J	Pta.9520	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001048111	unknown protein [Oryza sativa]	RFLP	mapped
PtIFG_975_4	gb\|H75119	Pinus taeda	0975J	Pta.9520	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001048111	unknown protein [Oryza sativa]	RFLP	mapped
estPtIFG_dhn-1	gb\|BX255067	Pinus pinaster	PP110C05	n/a	[GO:0003779] actin binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0008092] cytoskeletal protein binding	n/a	n/a	ESTP	mapped	UniGene assignment is based on the homologous Pinus taeda EST gb\|DR068451.
PtIPST_pLP2	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped	No sequence available.
PtLP15	gb\|AF013803	Pinus taeda	n/a	Pta.178	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_175517	histone H2A-1, putative [Arabidopsis thaliana]	ESTP	mapped
PtLP3-1	gb\|U67135	Pinus taeda	n/a	Pta.447	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001065841	pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	ESTP	mapped
PtMTU_lpPAL	gb\|U39792	Pinus taeda	n/a	Pta.2030	[GO:0045548] phenylalanine ammonia-lyase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016840] carbon-nitrogen lyase activity	ref\|NP_190894	phenylalanine ammonia-lyase [Arabidopsis thaliana]	ESTP	mapped	UniGene assignment is based blastn similarity to the Pinus taeda EST gb\|DR093041; Score = 1604 bits (868), Expect = 0.0, Identities = 888/897 (98%), Gaps = 3/897 (0%)
PtNCS_1CA4G	gb\|AA556223	Pinus taeda	1CA4G	n/a	[GO:0004799] thymidylate synthase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016741] transferase activity, transferring one-carbon groups	ref\|NP_179230	thymidylate synthase1 [Arabidopsis thaliana]	ESTP	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 64.7 bits (156), Expect = 4e-09, Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 0/33 (0%).
PtNCS_3H6z5_A	n/a	Pinus taeda	n/a	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	RFLP	mapped	No sequence available.
PtNCS_HLH1	gb\|AF103808	Pinus taeda	n/a	Pta.13198	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|BE761812; Score = 651 bits (352), Expect = 0.0, Identities = 377/395 (95%), Gaps = 3/395 (0%).
PtNCS_p9myb1_21	gb\|AL750878	Pinus pinaster	RS01D05	Pta.7264	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_201531	myb domain protein 44, myb domain protein r1 [Arabidopsis thaliana]	RFLP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DT626587; Score = 802 bits (434), Expect = 0.0, Identities = 453/462 (98%), Gaps = 2/462 (0%).
PtNCS_PtaAGP6	gb\|AF101785	Pinus taeda	PtaAGP6	Pta.11525	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001041796	conserved hypothetical protein [Oryza sativa]	ESTP	mapped
PtNCS_ptCadA	gb\|Z37991	Pinus taeda	ptCadA	Pta.428	[GO:0045551] cinnamyl-alcohol dehydrogenase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016614] oxidoreductase activity, acting on CH-OH group of donors	ref\|NP_195149	cinnamyl alcohol dehydrogenase 5 [Arabidopsis thaliana]	ESTP	mapped
PtRIP_0022	gb\|BV683041	Pinus taeda	pPT22	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0032	gb\|BV683044	Pinus taeda	pPT32	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0064	gb\|BV683046	Pinus taeda	pPT64	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0065	gb\|BV683047	Pinus taeda	pPT65	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0066	gb\|BV683048	Pinus taeda	pPT66	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0067	gb\|BV683049	Pinus taeda	pPT67	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0079	gb\|BV683053	Pinus taeda	pPT79	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0103	gb\|BV683057	Pinus taeda	pPT103	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0106	gb\|BV683059	Pinus taeda	pPT106	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0117	gb\|BV683060	Pinus taeda	pPT117	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0126	gb\|BV683062	Pinus taeda	pPT126	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0134	gb\|BV683065	Pinus taeda	pPT134	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0135	gb\|BV683066	Pinus taeda	pPT135	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0158	gb\|BV683068	Pinus taeda	pPT158	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0165	gb\|BV683070	Pinus taeda	pPT165	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0171	gb\|BV683072	Pinus taeda	pPT171	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0179	gb\|BV683073	Pinus taeda	pPT179	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0211	gb\|BV683076	Pinus taeda	pPT211	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0255	gb\|BV683147	Pinus taeda	pPT255	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0263	gb\|BV683148	Pinus taeda	pPT263	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0287	gb\|BV683077	Pinus taeda	pPT287	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0305	gb\|BV683080	Pinus taeda	pPT305	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0367	gb\|BV683081	Pinus taeda	pPT367	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0376	gb\|BV683083	Pinus taeda	pPT376	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0388	gb\|BV683084	Pinus taeda	pPT388	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0496	gb\|BV683151	Pinus taeda	pPT496	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0508	gb\|BV683085	Pinus taeda	pPT508	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0540	gb\|BV683152	Pinus taeda	pPT540	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0560	gb\|BV683088	Pinus taeda	pPT560	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0567	gb\|BV683089	Pinus taeda	pPT567	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0609	gb\|BV683090	Pinus taeda	pPT609	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0619	gb\|BV683091	Pinus taeda	pPT619	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0621	gb\|BV683092	Pinus taeda	pPT621	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0627	gb\|BV683093	Pinus taeda	pPT627	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0630	gb\|BV683095	Pinus taeda	pPT630	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0647	gb\|BV683097	Pinus taeda	pPT647	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0649	gb\|BV683098	Pinus taeda	pPT649	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0658	gb\|BV683099	Pinus taeda	pPT658	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0675	gb\|BV683100	Pinus taeda	pPT675	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0683	gb\|BV683101	Pinus taeda	pPT683	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0689	gb\|BV683103	Pinus taeda	pPT689	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0700	gb\|BV683106	Pinus taeda	pPT700	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0789	gb\|BV683108	Pinus taeda	pPT789	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0790	gb\|BV683109	Pinus taeda	pPT790	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0791	gb\|BV683110	Pinus taeda	pPT791	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0814	gb\|BV683112	Pinus taeda	pPT814	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0841	gb\|BV683113	Pinus taeda	pPT841	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0846	gb\|BV683114	Pinus taeda	pPT846	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0852	gb\|BV683115	Pinus taeda	pPT852	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0860	gb\|BV683116	Pinus taeda	pPT860	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0905	gb\|BV683117	Pinus taeda	pPT905	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0932	gb\|BV683119	Pinus taeda	pPT932	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0941	gb\|BV683120	Pinus taeda	pPT941	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0958	gb\|BV683122	Pinus taeda	pPT958	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0960	gb\|BV683123	Pinus taeda	pPT960	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0968	gb\|BV683124	Pinus taeda	pPT968	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0984	gb\|BV683125	Pinus taeda	pPT984	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_0990	gb\|BV683126	Pinus taeda	pPT990	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1023	gb\|BV683128	Pinus taeda	pPT1023	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1027	gb\|BV683129	Pinus taeda	pPT1027	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1035	gb\|BV683130	Pinus taeda	pPT1035	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1036	gb\|BV683131	Pinus taeda	pPT1036	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1037	gb\|BV683132	Pinus taeda	pPT1037	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1040	gb\|BV683133	Pinus taeda	pPT1040	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1072	gb\|BV683135	Pinus taeda	pPT1072	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_1077	gb\|BV683137	Pinus taeda	pPT1077	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_9138	gb\|BV683142	Pinus taeda	pPT9138	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtRIP_9315	gb\|BV683144	Pinus taeda	pPT9315	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtSIFG_0100	gb\|CF666287	Pinus taeda	RTCNT1_22_E09_A029	Pta.1497	[GO:0004364] glutathione transferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups	ref\|NP_176176	glutathione S-transferase [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_0126	gb\|CF671158	Pinus taeda	RTCNT1_55_D08_A029	Pta.10824	[GO:0016491] oxidoreductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[Lineage ends at prior level]	ref\|NP_001063656	FAD dependent oxidoreductase family protein [Oryza sativa]	SSR	mapped
PtSIFG_0133	gb\|DR022395	Pinus taeda	STRS1_50_F12_A034	Pta.14124	[GO:0016004] phospholipase activator activity	molecular_function	[GO:0030234] enzyme regulator activity	[GO:0008047] enzyme activator activity	[GO:0060229] lipase activator activity	ref\|NP_191788	ADP-ribosylation factor A1E [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_0141	gb\|CF472666	Pinus taeda	RTDS1_11_C04_A015	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0145	gb\|CF390086	Pinus taeda	RTDR2_12_A01_A021	Pta.12620	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0166	gb\|CF385811	Pinus taeda	RTDR1_6_F03_A015	Pta.12129	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0167	gb\|CX712497	Pinus taeda	RTPQ1_2_H04_A032	Pta.12061	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0168	gb\|DR177748	Pinus taeda	RTMNUT1_7_D09_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0174	gb\|CO364633	Pinus taeda	RTK1_16_H02_A029	Pta.6402	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0186	gb\|CF395413	Pinus taeda	RTDS2_11_E03_A021	Pta.332	[GO:0008270] zinc ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_001077694	zinc finger A20 and AN1domain-containing stress-associated protein 2 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0193	gb\|CF394546	Pinus taeda	RTDS2_6_H10_A021	Pta.449	[GO:0003735] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_180766	40S ribosomal protein S12 [Oryza sativa]	SSR	mapped
PtSIFG_0198	gb\|CF477014	Pinus taeda	RTWW3_5_A08_A022	Pta.5236	[GO:0008964] phosphoenolpyruvate carboxylase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016830] carbon-carbon lyase activity	ref\|NP_175738	phosphoenolpyruvate carboxylase [Arabdopsis thaliana}	SSR	not mapped
PtSIFG_0203	gb\|DR070969	Pinus taeda	RTDK1_16_F04_A029	Pta.15282	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0206	gb\|DR160521	Pinus taeda	RTFE1_6_B08_A029	Pta.2426	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_001065841	pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	SSR	mapped
PtSIFG_0209	gb\|CO158573	Pinus taeda	FLD1_7_F12_A029	Pta.2123	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0219	gb\|DR097837	Pinus taeda	STRR1_37_H04_A033	Pta.18	[GO:0004601] peroxidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016684] oxidoreductase activity, acting on peroxide as acceptor	ref\|NP_177313.1	peroxidase 12 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0237	gb\|CO368359	Pinus taeda	RTK1_40_D11_A029	Pta.6316	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|XP_002334075.1	ABC transporter family protein [Populus trichocarpa]	SSR	mapped
PtSIFG_0245	gb\|DR101217	Pinus taeda	STRR1_71_G07_A033	Pta.9202	[GO:0005509] calcium ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_001045400	calmodulin 2/3/5 [Oryza sativa]	SSR	mapped
PtSIFG_0249	gb\|CF470756	Pinus taeda	RTDS1_14_F08_A015	Pta.16445	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0265	gb\|CO176556	Pinus taeda	NDL1_62_E08_A029	Pta.17599	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001063419	putative ZF-HD homeobox protein, Cys/His-rich dimerisation region domain containing protein [Oryza sativa]	SSR	mapped
PtSIFG_0306	gb\|DR165426	Pinus taeda	RTPHOS1_5_B04_A029	Pta.18781	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_187687	DNA binding / transcription factor [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_0307	gb\|CV032379	Pinus taeda	RTNACL1_7_E09_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0338	gb\|CO169921	Pinus taeda	NDL1_10_B08_A029	Pta.15905	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0349	gb\|CF401884	Pinus taeda	RTWW1_15_C02_A015	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0371	gb\|DR068471	Pinus taeda	RTDK1_1_B12_A029	Pta.16874	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0408	gb\|CF400696	Pinus taeda	RTWW1_7_C08_A015	Pta.16295	[GO:0005215] transporter activity	molecular_function	[GO:0005215] transporter activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001050937	nitrate transporter, putative POT family protein [Oryza sativa]	SSR	mapped
PtSIFG_0418	gb\|CX714358	Pinus taeda	RTPQ1_20_H04_A032	Pta.22	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|XP_001073300	unknown protein [Ratus norvegicus]	SSR	not mapped
PtSIFG_0424	gb\|CF392909	Pinus taeda	RTDR3_19_A07_A022	Pta.15662	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_193515	DNA-binding protein-related [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0436	gb\|CO169703	Pinus taeda	NDL1_9_B05_A029	Pta.8616	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_001056686	tobacco mosaic virus helicase domain-binding protein [Oryza sativa]	SSR	not mapped
PtSIFG_0437	gb\|DR167379	Pinus taeda	RTPHOS1_18_A08_A029	Pta.14061	[GO:0004462] lactoylglutathione lyase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016829] lyase activity	[GO:0016846] carbon-sulfur lyase activity	ref\|NP_565231	lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0440	gb\|CF389834	Pinus taeda	RTDR2_5_C04_A021	Pta.6258	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0443	gb\|DR388659	Pinus taeda	RTHG1_29_D12_A029	Pta.10949	[GO:0005215] transporter activity	molecular_function	[GO:0005215] transporter activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001058333	cellular retinaldehyde binding/alpha-tocopherol transport family protein [Oryza sativa]	SSR	not mapped
PtSIFG_0463	gb\|DR080700	Pinus taeda	RTFEPL1_24_C08_A029	Pta.12215	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0477	gb\|DR120281	Pinus taeda	RTMG1_28_E05_A029	Pta.14955	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001044842	Hs1pro-1 protein [Oryza sativa]	SSR	not mapped
PtSIFG_0490	gb\|CF475807	Pinus taeda	RTWW2_15_G11_A021	Pta.6121	[GO:0008320] protein transmembrane transporter activity	molecular_function	[GO:0005215] transporter activity	[GO:0022892] substrate-specific transporter activity	[GO:0008320] protein transmembrane transporter activity	ref\|NP_172429	emp24/gp25L/p24 family protein [Oryza sativa]	SSR	not mapped
PtSIFG_0493	gb\|CF672964	Pinus taeda	RTCNT1_75_D06_A029	Pta.7102	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001046101	homeodomain transcription factor [Oryza sativa]	SSR	mapped
PtSIFG_0551	gb\|DR101705	Pinus taeda	STRR1_75_E08_A033	Pta.3071	[GO:0004449] isocitrate dehydrogenase (NAD+) activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016614] oxidoreductase activity, acting on CH-OH group of donors	ref\|NP_568113	isocitrate dehydrogenase, putative [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0561	gb\|CX645741	Pinus taeda	COLD1_5_B12_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0563	gb\|CF478909	Pinus taeda	RTWW3_15_H09_A022	Pta.6051	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0564	gb\|CF474913	Pinus taeda	RTWW2_8_A04_A021	n/a	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_190848	zinc finger family protein [Arabidopsis thaliana]	SSR	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 108 bits (271), Expect = 2e-22, Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 0/67 (0%).
PtSIFG_0566	gb\|DR024231	Pinus taeda	STRS1_63_A11_A034	Pta.13203	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0573	gb\|DR177163	Pinus taeda	RTMNUT1_3_B09_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0587	gb\|CF388496	Pinus taeda	RTDR2_3_C09_A021	Pta.14472	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0592	gb\|CF665817	Pinus taeda	RTCNT1_18_E06_A029	Pta.9637	[GO:0009408] response to heat	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[GO:0009408] response to heat	ref\|NP_194497	heat shock protein 21 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0594	gb\|DR088945	Pinus taeda	RTAL1_5_D04_A029	Pta.12080	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0596	gb\|CF479238	Pinus taeda	RTWW3_24_G06_A022	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0625	gb\|CO175900	Pinus taeda	NDL1_57_G12_A029	n/a	[GO:0030001] metal ion transport	molecular_function	[GO:0051234] establishment of localization	[GO:0006810] transport	[GO:0006811] ion transport	ref\|NP_001061768	copper chaperone homolog [Oryza sativa]	SSR	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 107 bits (266), Expect = 5e-22 Identities = 49/62 (79%), Positives = 60/62 (96%), Gaps = 0/62 (0%).
PtSIFG_0629	gb\|DR025049	Pinus taeda	STRS1_69_F10_A034	Pta.6346	[GO:0009939] hydrolase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[Lineage ends at prior level]	ref\|NP_198084	GA binding protein [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0635	gb\|CF477975	Pinus taeda	RTWW3_17_H07_A022	Pta.7989	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001047557	unknown protein [Oryza sativa]	SSR	mapped
PtSIFG_0636	gb\|DR024751	Pinus taeda	STRS1_67_F03_A034	Pta.10977	[GO:0009828] plant-type cell wall organization	biological_process	[GO:0009987] cellular process	[GO:0070882] cell wall organization or biogenesis	[GO:0007047] cell wall organization	ref\|NP_001051731	alpha-expansin OsEXPA7 [Oryza sativa]	SSR	not mapped
PtSIFG_0639	gb\|DR161521	Pinus taeda	RTFE1_12_G05_A029	Pta.104	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_563969	unknown protein [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_0640	gb\|CF402547	Pinus taeda	RTWW1_21_C11_A015	Pta.14949	[GO:0004601] peroxidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016684] oxidoreductase activity, acting on peroxide as acceptor	ref\|NP_177835	peroxidase, putative [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0652	gb\|CF402877	Pinus taeda	RTWW1_23_H09_A015	Pta.15615	[GO:0003676] nucleic acid binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[Lineage ends at prior level]	ref\|NP_001067437	zinc finger CCHC-type domain containing protein [Oryza sativa]	SSR	mapped
PtSIFG_0653	gb\|DR387173	Pinus taeda	RTHG1_20_A05_A029	Pta.6038	[GO:0003575] structural constituent of ribosome	molecular_function	[GO:0005198] structural molecule activity	[GO:0003735] structural constituent of ribosome	[Lineage ends at prior level]	ref\|NP_001047832	60S ribosomal protein L12 [Oryza sativa]	SSR	not mapped
PtSIFG_0662	gb\|DR016425	Pinus taeda	STRS1_10_B07_A034	Pta.11848	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001059050	basic helix-loop-helix dimerisation region bHLH domain containing protein [Oryza sativa]	SSR	not mapped
PtSIFG_0668	gb\|CX712304	Pinus taeda	RTPQ1_1_E02_A032	Pta.17072	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_0715	gb\|CO176651	Pinus taeda	NDL1_63_H04_A029	Pta.18310	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_0737	gb\|CF476612	Pinus taeda	RTWW3_2_B12_A022	Pta.14051	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001078202	LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4) [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_0740	gb\|DR025602	Pinus taeda	STRS1_72_D06_A034	Pta.7440	[GO:0005509] calcium ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_195592	calcium-binding EF hand family protein [Arabidopsis thaliana]	SSR	mapped
PtSIFG_0745	gb\|CO364441	Pinus taeda	RTK1_15_E12_A029	Pta.16166	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1005	gb\|AI812884	Pinus taeda	22B11	Pta.11928	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_177032	unknown protein [Arabidopsis thaliana]	SSR	mapped
PtSIFG_1008	gb\|BQ695936	Pinus taeda	NXPV_034_E06	Pta.7222	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1018	gb\|BQ696488	Pinus taeda	NXPV_041_H02	Pta.260	[GO:0004568] chitinase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016798] hydrolase activity, acting on glycosyl bonds	ref\|NP_172076	chitinase [Arabidopsis thaliana]	SSR	mapped
PtSIFG_1030	gb\|AW981840	Pinus taeda	PC19C12	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1032	gb\|BI397639	Pinus taeda	NXPV_102_F09	Pta.12090	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1052	gb\|AW056658	Pinus taeda	ST54C06	Pta.2245	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1055	gb\|AW697582	Pinus taeda	ST59C11	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1060	gb\|AW697707	Pinus taeda	ST65F12	Pta.1906	[GO:0003723] RNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003723] RNA binding	ref\|NP_196239	RNA binding protein, putative [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_1062	gb\|AW225917	Pinus taeda	ST75C03	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1065	gb\|AW226075	Pinus taeda	ST77A10	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1066	gb\|AW226133	Pinus taeda	ST77G01	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1102	gb\|BQ700433	Pinus taeda	NXRV105_F03	Pta.12798	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1110	gb\|AW888197	Pinus taeda	NXNV_126_A10	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1113	gb\|BQ702924	Pinus taeda	NXSI_134_C12	Pta.11893	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1123	gb\|BQ634623	Pinus taeda	NXRV071_C04	Pta.12740	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1166	gb\|DR388699	Pinus taeda	RTHG1_30_A04_A029	Pta.9173	[GO:0016787] hydrolase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[Lineage ends at prior level]	ref\|NP_001061676	NUDIX hydrolase domain containing protein [Oryza sativa]	SSR	mapped
PtSIFG_1184	gb\|BQ700196	Pinus taeda	NXRV102_D11	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1185	gb\|DR056188	Pinus taeda	RTCA1_28_D06_A029	Pta.13664	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_1190	gb\|BQ655604	Pinus taeda	NXRV096_G03	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1207	gb\|BM158590	Pinus taeda	NXLV_036_F01	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1212	gb\|BQ197323	Pinus taeda	NXLV112_E03	Pta.13801	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1217	gb\|CF393828	Pinus taeda	RTDS2_1_F07_A021	Pta.11614	[GO:0004527] exonuclease activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016788] hydrolase activity, acting on ester bonds	ref\|NP_001042752	exonuclease domain containing protein [Oryza sativa]	SSR	not mapped
PtSIFG_1241	gb\|DR015587	Pinus taeda	STRS1_4_A04_A034	Pta.13123	[GO:0003723] RNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003723] RNA binding	ref\|NP_001044971	RNA recognition motif [Oryza sativa]	SSR	not mapped
PtSIFG_1252	gb\|BQ697807	Pinus taeda	NXPV_061_A12	Pta.14196	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1260	gb\|CD021007	Pinus taeda	NXNV_128_A04	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1262	gb\|DR011911	Pinus taeda	HEAT1_8_E08_A029	Pta.6567	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_1295	gb\|BG040898	Pinus taeda	NXSI_116_D08	Pta.7101	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_565716	unknown protein [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_1318	gb\|DT634927	Pinus taeda	PIMGB30	Pta.5296	[GO:0008270] zinc ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_565271	UBX domain-containing protein-2 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_1325	gb\|CF475353	Pinus taeda	RTWW2_13_A05_A021	Pta.13709	[GO:0008536] Ran GTPase binding	molecular_function	[GO:0005488] binding	[GO:0005515] protein binding	[GO:0019899] enzyme binding	ref\|NP_173417	regulator of chromosome condensation family protein [Arabidopsis thaliana]	SSR	mapped
PtSIFG_2229	gb\|CO410345	Pinus taeda	PIAL188	Pta.5403	[GO:0009073] aromatic amino acid family biosynthetic process, shikimate pathway	molecular_function	[GO:0008152] metabolic process	[GO:0044237] cellular metabolic process	[GO:0006766] vitamin metabolic process	ref\|NP_001060314	phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor [Oryza sativa]	SSR	mapped
PtSIFG_2461	gb\|DT626577	Pinus taeda	PIMAC32	Pta.19202	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_2510	gb\|DN463709	Pinus taeda	RPIJ226	n/a	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|XP_002528315	r2r3-myb transcription factor, putative [Ricinus communis]	SSR	not mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 196 bits (498), Expect = 2e-48, Identities = 88/105 (83%), Positives = 98/105 (93%), Gaps = 0/105 (0%)
PtSIFG_4102	gb\|DR096547	Pinus taeda	STRR1_28_E01_A033	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4110	gb\|CV032058	Pinus taeda	RTNACL1_5_B05_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4133	gb\|CF395323	Pinus taeda	RTDS2_11_G01_A021	Pta.15890	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4160	gb\|CO159086	Pinus taeda	FLD1_11_F07_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4177	gb\|CN784862	Pinus taeda	PIAAR55	Pta.13875	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4192	gb\|DR160121	Pinus taeda	RTFE1_3_G12_A029	Pta.17452	[GO:0003824] catalytic activity	molecular_function	[GO:0003824] catalytic activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001056169	protein phosphatase type 2C [Oryza sativa]	SSR	not mapped
PtSIFG_4202	gb\|DR165611	Pinus taeda	RTPHOS1_6_F02_A029	Pta.18176	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_563958	unknown protein [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_4207	gb\|CF386469	Pinus taeda	RTDR1_14_A10_A015	Pta.15071	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4213	gb\|CF668041	Pinus taeda	RTCNT1_34_B11_A029	Pta.13660	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4218	gb\|CO175197	Pinus taeda	NDL1_53_E02_A029	Pta.18433	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4222	gb\|DR110547	Pinus taeda	RTS1_11_B10_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4232	gb\|CO364859	Pinus taeda	RTK1_22_E12_A029	n/a	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001063215	AP2-1 protein, fragment [Oryza sativa]	SSR	not mapped
PtSIFG_4233	gb\|CO361093	Pinus taeda	NDL2_2_E05_A029	n/a	[GO:0005507] copper ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_178388	plantacyanin [Arabidopsis thaliana]	SSR	mapped	RefSeq protein assignment is based on blastx similarity to the GenBank seq.; Score = 108 bits (269), Expect = 4e-22, Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 2/99 (2%).
PtSIFG_4239	gb\|CF470350	Pinus taeda	RTDS1_17_B07_A015	Pta.16426	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001060604	unknown protein [Oryza sativa]	SSR	not mapped
PtSIFG_4245	gb\|CF386139	Pinus taeda	RTDR1_8_B05_A015	Pta.990	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4249	gb\|CF395415	Pinus taeda	RTDS2_11_F12_A021	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4282	gb\|CX646966	Pinus taeda	COLD1_12_D04_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4304	gb\|BM492561	Pinus taeda	NXRV_028_B02	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4315	gb\|BQ634773	Pinus taeda	NXRV073_A11	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4378	gb\|CX715556	Pinus taeda	RTPQ1_35_A07_A032	Pta.3299	[GO:0016629] 12-oxophytodienoate reductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors	ref\|NP_177794	12-oxophytodienoate reductase 1 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_4380	gb\|CO201222	Pinus taeda	RTCNT2_4_H09_A029	Pta.15586	[GO:0008234] cysteine-type peptidase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0008233] peptidase activity	ref\|NP_680113	cysteine-type peptidase [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_4391	gb\|DR019194	Pinus taeda	STRS1_28_H10_A034	Pta.423	[GO:0016207] 4-coumarate-CoA ligase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016874] ligase activity	[GO:0016877] ligase activity, forming carbon-sulfur bonds	ref\|NP_188761	4-coumarate-CoA ligase enzyme [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_4393	gb\|CX715983	Pinus taeda	RTPQ1_39_E01_A032	Pta.16652	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_195384	unknown protein [Arabidopsis thaliana]	SSR	not mapped
PtSIFG_4394	gb\|DR385346	Pinus taeda	RTHG1_8_D04_A029	Pta.12687	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_176881	LOB domain protein 40 / lateral organ boundaries domain protein 40 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_4407	gb\|CO168018	Pinus taeda	FLD1_72_F01_A029	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	not mapped
PtSIFG_4415	gb\|DR092449	Pinus taeda	STRR1_1_A09_A033	Pta.20587	[GO:0009740] gibberellic acid mediated signaling	biological_process	[GO:0009987] cellular process	[GO:0007154] cell communication	[GO:0007165] signal transduction	ref\|NP_197027	gibberellin regulated protein 4 [Arabidopsis thaliana]	SSR	mapped
PtSIFG_4438	gb\|CF668559	Pinus taeda	RTCNT1_37_F09_A029	Pta.17149	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4446	gb\|CF474477	Pinus taeda	RTWW2_9_H08_A021	Pta.9940	[GO:0005509] calcium ion binding	molecular_function	[GO:0005488] binding	[GO:0043167] ion binding	[GO:0043169] cation binding	ref\|NP_001053764	calcium-binding EF-hand family protein [Oryza sativa]	SSR	mapped
PtSIFG_4447	gb\|DR020650	Pinus taeda	STRS1_38_H11_A034	Pta.336	[GO:0016298] lipase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016787] hydrolase activity	[GO:0016788] hydrolase activity, acting on ester bonds	ref\|NP_001064968	epoxide hydrolase, putative [Oryza sativa]	SSR	mapped
PtSIFG_4454	gb\|DR101834	Pinus taeda	STRR1_76_E02_A033	Pta.6343	[GO:0009739] gibberellic acid mediated signaling	biological_process	[GO:0009987] cellular process	[GO:0007154] cell communication	[GO:0007165] signal transduction	ref\|NP_001055630	gibberellin regulated protein 2 precursor [Oryza sativa]	SSR	mapped
PtSIFG_4458	gb\|CF476608	Pinus taeda	RTWW3_2_C07_A022	Pta.16829	[GO:0003677] DNA binding	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_001043797	WRKY transcription factor 34 [Oryza sativa]	SSR	mapped
PtSIFG_4472	gb\|DR052128	Pinus taeda	RTCA1_2_C11_A029	Pta.16857	[GO:0005524] ATP binding	molecular_function	[GO:0005488] binding	[GO:0000166] nucleotide binding	[GO:0017076] purine nucleotide binding	ref\|NP_001059451	adenylate kinase family protein [Oryza sativa]	SSR	mapped
PtSIFG_4493	gb\|DR047947	Pinus taeda	RTBOR1_5_E02_A029	Pta.12365	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
PtSIFG_4502	gb\|CF473835	Pinus taeda	RTWW2_19_C07_A021	Pta.16639	[GO:0003824] catalytic activity	molecular_function	[GO:0003824] catalytic activity	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001056894	esterase/lipase/thioesterase domain containing protein [Oryza sativa]	SSR	mapped
PtTX2037	gb\|AF143959	Pinus taeda	1213r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2080	gb\|AF286600	Pinus taeda	6j11f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2091	gb\|AF333776	Pinus taeda	10g3tot	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2093	gb\|AF286602	Pinus taeda	10i22tot	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2094	gb\|AF286603	Pinus taeda	10m23tot	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2123	gb\|AF459422	Pinus taeda	18b6f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2146	gb\|AF143963	Pinus taeda	18b11f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2164	gb\|AF143964	Pinus taeda	18a16r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX2189	gb\|AF393980	Pinus taeda	16o15tot	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3_lp3-1	gb\|U52865	Pinus taeda	n/a	Pta.12396	[GO:0006950] response to stress	biological_process	[GO:0050896] response to stimulus	[GO:0006950] response to stress	[Lineage ends at prior level]	ref\|NP_0010658412	Pollen-specific desiccation-associated LLA23 protein [Oryza sativa]	ESTP	mapped	UniGene assignment is based on blastn similarity to the homologous Pinus taeda EST gb\|DR094888; Score = 784 bits (424), Expect = 0.0, Identities = 434/439 (98%), Gaps = 0/439 (0%).
PtTX3001	gb\|AF393981	Pinus taeda	33h23f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3011	gb\|AF143965	Pinus taeda	33n1f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3013	gb\|AF143966	Pinus taeda	59k24f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3019	gb\|AF277846	Pinus taeda	60e22r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3020	gb\|AF143969	Pinus taeda	64f20con	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3025	gb\|AF143970	Pinus taeda	76g10f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3027	gb\|AF441508	Pinus taeda	60l4r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3029	gb\|AF441509	Pinus taeda	58b2f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3032	gb\|AF143973	Pinus taeda	28l13g	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3034	gb\|AF143974	Pinus taeda	57g14con	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3037	gb\|AF143975	Pinus taeda	75j7f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3045	gb\|AF333781	Pinus taeda	120f10r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3047	gb\|AF286606	Pinus taeda	120d8r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3049	gb\|AF286607	Pinus taeda	120d12r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3052	gb\|AF441514	Pinus taeda	47a7f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3055	gb\|AF286608	Pinus taeda	48m13f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3058	gb\|AF441516	Pinus taeda	34b20f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3063	gb\|AF286610	Pinus taeda	48f7f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3081	gb\|AF441520	Pinus taeda	65n18f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3097	gb\|AF441525	Pinus taeda	62c1f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3105	gb\|AF333784	Pinus taeda	64c1f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3107	gb\|AF333785	Pinus taeda	64f1f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3110	gb\|AF441530	Pinus taeda	63o18f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3114	gb\|AF441531	Pinus taeda	75p23f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3116	gb\|AF333787	Pinus taeda	70l7f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3117	gb\|AF441533	Pinus taeda	49h3r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX3120	gb\|AF441534	Pinus taeda	61i19r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4001	gb\|AF286619	Pinus taeda	161c20f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4003	gb\|AF286620	Pinus taeda	162c8f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4030	gb\|AF324775	Pinus taeda	162b4f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4033	gb\|BV728878	Pinus taeda	162i24r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4036	gb\|AF286626	Pinus taeda	161d13r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4056	gb\|AF324776	Pinus taeda	159g4	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4058	gb\|AY330146	Pinus taeda	159n5r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4062	gb\|AF286628	Pinus taeda	161d18r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4079	gb\|AF441549	Pinus taeda	162h5f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4090	gb\|AF324780	Pinus taeda	167i18r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4092	gb\|AF324781	Pinus taeda	167m16r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4093	gb\|AF324782	Pinus taeda	167j23r	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4112	gb\|AF324785	Pinus taeda	162g16f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4137	gb\|AF324787	Pinus taeda	167m16	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4147	gb\|AF324789	Pinus taeda	169b13	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4181	gb\|BV728850	Pinus taeda	161b9f	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4214	gb\|AF455077	Pinus taeda	179c9	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4215	gb\|AF455078	Pinus taeda	179a23	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtTX4228	gb\|AF455080	Pinus taeda	179f19	n/a	n/a	n/a	n/a	n/a	n/a	n/a	n/a	SSR	mapped
PtWS1_PCBER-PT1	gb\|AF242490	Pinus taeda	n/a	Pta.376	[GO:0032442] phenylcoumaran benzylic ether reductase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016491] oxidoreductase activity	[GO:0016614] oxidoreductase activity, acting on CH-OH group of donors	gb\|AAF64173	phenylcoumaran benzylic ether reductase PT1 [Pinus taeda]	ESTP	mapped
RPtest11	gb\|AA557106	Pinus taeda	6N7H	Pta.563	[GO:0008080] N-acetyltransferase activity	molecular_function	[GO:0003824] catalytic activity	[GO:0016740] transferase activity	[GO:0016746] transferase activity, transferring acyl groups	ref\|NP_196882	GCN5-related N-acetyltransferase, putative [Arabidopsis thaliana]	SSR	not mapped
RPtest5	gb\|AA556655	Pinus taeda	2C9F	Pta.5366	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_189345	unknown protein [Arabidopsis thaliana]	SSR	not mapped
SsrPt_ctg1376	gb\|CD024501	Pinus taeda	NXRV_043_G05	n/a	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
SsrPt_ctg7141	gb\|DT626103	Pinus taeda	PIMA711	Pta.10195	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped
SsrPt_ctg7444	gb\|CD028062	Pinus taeda	NXNV001F01	Pta.204	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	ref\|NP_001068405	Translationally controlled tumor protein family [Oryza sativa]	SSR	mapped
SsrPt_ctg9249	gb\|BE761900	Pinus taeda	NXCI_071_C08	Pta.5267	[GO:0003700] transcription factor activity	molecular_function	[GO:0005488] binding	[GO:0003676] nucleic acid binding	[GO:0003677] DNA binding	ref\|NP_175627	ATHB-15 [Arabidopsis thaliana]	SSR	mapped
SsrPt_ctg946	gb\|CX714486	Pinus taeda	RTPQ1_22_F12_A032	Pta.11295	[GO:0003674] molecular_function	molecular_function	[Lineage ends at prior level]	[Lineage ends at prior level]	[Lineage ends at prior level]	n/a	n/a	SSR	mapped

Compiled by C. Echt et al., January 2011, USDA Forest Service.