Matching miRNA families 156 159 160 164 166 168 169 171 172 390 393 394 395 396 397 399 408 414 441 445 444 529 818 821 827 845 909 1030 1099 1118 1119 1120 1122 1130 1134 1138 1171 1310 1438 1528 1533 1846 1848 1858 1862 1867 1871 2091 2094 2102 BLASTN 2.2.20+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 2CET3TYP01R Database: GenBank non-mouse and non-human EST entries 48,597,249 sequences; 27,370,549,440 total letters Query= cre-miR909.2 MIMAT0004391 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ470186.1| HX02A14r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 ALIGNMENTS >gb|BQ470186.1| HX02A14r HX Hordeum vulgare subsp. vulgare cDNA clone HX02A14 5-PRIME, mRNA sequence. Length=597 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 ATGCAAACATGACCCTGAA 19 ||||||||||||||||||| Sbjct 22 ATGCAAACATGACCCTGAA 40 Query= cre-miR1171 MIMAT0005430 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|BQ761741.1| EBem10_SQ001_P16_R embryo, 2 Day germination, ... 42.8 1e-04 gb|BM373074.2| EBma04_SQ002_P18_R maternal, 10 DPA, no treatm... 42.8 1e-04 gb|BQ468092.1| HR01O20r HR Hordeum vulgare subsp. vulgare cDN... 42.8 1e-04 gb|BQ463190.1| HI04F11r HI Hordeum vulgare subsp. vulgare cDN... 42.8 1e-04 gb|BE060388.3| HVSMEg0012C20f Hordeum vulgare pre-anthesis sp... 42.8 1e-04 gb|AW983298.2| HVSMEg0010B22f Hordeum vulgare pre-anthesis sp... 42.8 1e-04 gb|GH210205.1| HVSMEa0008G21f2 Hordeum vulgare seedling shoot... 41.0 4e-04 dbj|BY857362.1| BY857362 Germination shoots Hordeum vulgare s... 41.0 4e-04 gb|BF625321.2| HVSMEa0008G21f Hordeum vulgare seedling shoot ... 41.0 4e-04 gb|GH218429.1| HVSMEg0011O06f2 Hordeum vulgare pre-anthesis s... 39.2 0.001 gb|BF268131.3| HV_CEa0019P17f Hordeum vulgare seedling green ... 39.2 0.001 gb|GH206880.1| HV_CEa0008A22r2 Hordeum vulgare (Blumeria chal... 35.6 0.016 dbj|BY841512.1| BY841512 Etiolated seedling shoot Hordeum vul... 35.6 0.016 dbj|BY849616.1| BY849616 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY843802.1| BY843802 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|GH216700.1| HVSMEg0001N03f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 dbj|BY849810.1| BY849810 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY849250.1| BY849250 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY844443.1| BY844443 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 gb|CA025249.1| HZ51J16r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU980904.1| HA22A19r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU967787.1| HB05G06r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU967712.1| HB05C17r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ760964.1| EBro03_SQ003_P17_R root, 3 week, waterlogged, ... 33.7 0.055 gb|BG343050.2| HVSMEg0001N15f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BG343039.2| HVSMEg0001N03f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|BQ761741.1| EBem10_SQ001_P16_R embryo, 2 Day germination, no treatment, cv Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone EBem10_SQ001_P16 5', mRNA sequence. Length=130 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 37 TGGAGTGGAGTGGAGTGGAGTGG 15 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGA 19 ||||||||||||||||||| Sbjct 32 TGGAGTGGAGTGGAGTGGA 14 >gb|BM373074.2| EBma04_SQ002_P18_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_P18 5', mRNA sequence. Length=427 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 42 TGGAGTGGAGTGGAGTGGAGTGG 20 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGA 19 ||||||||||||||||||| Sbjct 37 TGGAGTGGAGTGGAGTGGA 19 >gb|BQ468092.1| HR01O20r HR Hordeum vulgare subsp. vulgare cDNA clone HR01O20 5-PRIME, mRNA sequence. Length=337 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 58 TGGAGTGGAGTGGAGTGGAGTGG 36 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGA 19 ||||||||||||||||||| Sbjct 53 TGGAGTGGAGTGGAGTGGA 35 >gb|BQ463190.1| HI04F11r HI Hordeum vulgare subsp. vulgare cDNA clone HI04F11 5-PRIME, mRNA sequence. Length=261 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 69 TGGAGTGGAGTGGAGTGGAGTGG 47 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGA 19 ||||||||||||||||||| Sbjct 64 TGGAGTGGAGTGGAGTGGA 46 >gb|BE060388.3| HVSMEg0012C20f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012C20f, mRNA sequence. Length=713 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 38 TGGAGTGGAGTGGAGTGGAGTGG 16 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||| Sbjct 41 GAGTGGAGTGGAGTGGAGTGG 21 >gb|AW983298.2| HVSMEg0010B22f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0010B22f, mRNA sequence. Length=816 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||||| Sbjct 28 TGGAGTGGAGTGGAGTGGAGTGG 6 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||| Sbjct 31 GAGTGGAGTGGAGTGGAGTGG 11 >gb|GH210205.1| HVSMEa0008G21f2 Hordeum vulgare seedling shoot (cold stress) cDNA library HVSMEa (HVcDNA0001)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0007N23r, mRNA sequence. Length=614 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||||||||||||||||||||| Sbjct 76 GGAGTGGAGTGGAGTGGAGTGG 55 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAG 20 |||||||||||||||||||| Sbjct 72 TGGAGTGGAGTGGAGTGGAG 53 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||| ||||||||||||||||| Sbjct 81 GGAGCGGAGTGGAGTGGAGTGG 60 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||| |||| |||||||||||| Sbjct 87 TGGAGCGGAGCGGAGTGGAGTGG 65 >dbj|BY857362.1| BY857362 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl44b05 5', mRNA sequence. Length=382 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTG 22 |||||||||||||||||||||| Sbjct 185 TGGAGTGGAGTGGAGTGGAGTG 164 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 |||| |||||||||||||||||| Sbjct 189 TGGA-TGGAGTGGAGTGGAGTGG 168 >gb|BF625321.2| HVSMEa0008G21f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0008G21f, mRNA sequence. Length=706 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||||||||||||||||||||| Sbjct 76 GGAGTGGAGTGGAGTGGAGTGG 55 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAG 20 |||||||||||||||||||| Sbjct 72 TGGAGTGGAGTGGAGTGGAG 53 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||| ||||||||||||||||| Sbjct 81 GGAGCGGAGTGGAGTGGAGTGG 60 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGTGG 23 ||||| |||| |||||||||||| Sbjct 87 TGGAGCGGAGCGGAGTGGAGTGG 65 >gb|GH218429.1| HVSMEg0011O06f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024N01r, mRNA sequence. Length=622 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 ||||||||||||||||||||| Sbjct 28 GAGTGGAGTGGAGTGGAGTGG 8 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAG 20 |||||||||||||||||||| Sbjct 25 TGGAGTGGAGTGGAGTGGAG 6 >gb|BF268131.3| HV_CEa0019P17f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0019P17f, mRNA sequence. Length=806 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGTGGAGTGGAGTGGAGT 21 ||||||||||||||||||||| Sbjct 48 TGGAGTGGAGTGGAGTGGAGT 28 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 4 AGTGGAGTGGAGTGGAGTGG 23 |||||||||||||||||||| Sbjct 50 AGTGGAGTGGAGTGGAGTGG 31 >gb|GH206880.1| HV_CEa0008A22r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEa (HVcDNA0004)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0001D18f, mRNA sequence. Length=513 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||||||||||||| ||||||| Sbjct 70 GGAGTGGAGTGGAGCGGAGTGG 49 >dbj|BY841512.1| BY841512 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet59g06 5', mRNA sequence. Length=203 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAG 20 ||||||||||||||||||| Sbjct 84 GGAGTGGAGTGGAGTGGAG 66 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||| ||||||||||||||||| Sbjct 89 GGAGGGGAGTGGAGTGGAGTGG 68 >dbj|BY849616.1| BY849616 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast10g08 5', mRNA sequence. Length=299 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAG 20 ||||||||||||||||||| Sbjct 147 GGAGTGGAGTGGAGTGGAG 129 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||| ||||||||||||||||| Sbjct 152 GGAGGGGAGTGGAGTGGAGTGG 131 >dbj|BY843802.1| BY843802 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet93f01 5', mRNA sequence. Length=445 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAG 20 ||||||||||||||||||| Sbjct 90 GGAGTGGAGTGGAGTGGAG 72 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 GGAGTGGAGTGGAGTGGAGTGG 23 |||| ||||||||||||||||| Sbjct 95 GGAGGGGAGTGGAGTGGAGTGG 74 >gb|GH216700.1| HVSMEg0001N03f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0021I23r, mRNA sequence. Length=297 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAG 20 |||||||||||||||||| Sbjct 19 GAGTGGAGTGGAGTGGAG 2 >dbj|BY849810.1| BY849810 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast13b09 5', mRNA sequence. Length=399 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TGGAGTGGAGTGGAGTGG 18 |||||||||||||||||| Sbjct 172 TGGAGTGGAGTGGAGTGG 189 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 6 TGGAGTGGAGTGGAGTGG 23 |||||||||||||||||| Sbjct 172 TGGAGTGGAGTGGAGTGG 189 >dbj|BY849250.1| BY849250 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast06c01 5', mRNA sequence. Length=395 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAG 20 |||||||||||||||||| Sbjct 24 GAGTGGAGTGGAGTGGAG 7 >dbj|BY844443.1| BY844443 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart07c09 5', mRNA sequence. Length=435 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TGGAGTGGAGTGGAGTGG 18 |||||||||||||||||| Sbjct 207 TGGAGTGGAGTGGAGTGG 224 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 6 TGGAGTGGAGTGGAGTGG 23 |||||||||||||||||| Sbjct 207 TGGAGTGGAGTGGAGTGG 224 >gb|CA025249.1| HZ51J16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51J16 5-PRIME, mRNA sequence. Length=431 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 |||||||| |||||||||||| Sbjct 35 GAGTGGAGGGGAGTGGAGTGG 15 >gb|BU980904.1| HA22A19r HA Hordeum vulgare subsp. vulgare cDNA clone HA22A19 5-PRIME, mRNA sequence. Length=379 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 |||||||| |||||||||||| Sbjct 39 GAGTGGAGGGGAGTGGAGTGG 19 >gb|BU967787.1| HB05G06r BC Hordeum vulgare subsp. vulgare cDNA clone HB05G06 5-PRIME, mRNA sequence. Length=412 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 |||||||| |||||||||||| Sbjct 47 GAGTGGAGGGGAGTGGAGTGG 27 >gb|BU967712.1| HB05C17r BC Hordeum vulgare subsp. vulgare cDNA clone HB05C17 5-PRIME, mRNA sequence. Length=439 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAGTGG 23 |||||||| |||||||||||| Sbjct 47 GAGTGGAGGGGAGTGGAGTGG 27 >gb|BQ760964.1| EBro03_SQ003_P17_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ003_P17 5', mRNA sequence. Length=425 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAG 20 |||||||||||||||||| Sbjct 326 GAGTGGAGTGGAGTGGAG 309 >gb|BG343050.2| HVSMEg0001N15f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0001N15f, mRNA sequence. Length=980 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAG 20 |||||||||||||||||| Sbjct 19 GAGTGGAGTGGAGTGGAG 2 >gb|BG343039.2| HVSMEg0001N03f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0001N03f, mRNA sequence. Length=841 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 GAGTGGAGTGGAGTGGAG 20 |||||||||||||||||| Sbjct 19 GAGTGGAGTGGAGTGGAG 2 Query= pta-miR166b MIMAT0004994 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 39.2 0.001 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 39.2 0.001 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCC 21 ||||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCCC 158 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCC 21 ||||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCCC 156 Query= pta-miR159a MIMAT0004990 Length=20 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGGATTGAAGGGAGCTC 18 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TTGGATTGAAGGGAGCTC 18 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGGATTGAAGGGAGCTC 18 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= pta-miR1310 MIMAT0009127 Length=23 Score E Sequences producing significant alignments: (Bits) Value dbj|BY840940.1| BY840940 Etiolated seedling shoot Hordeum vul... 33.7 0.055 ALIGNMENTS >dbj|BY840940.1| BY840940 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet51a12 5', mRNA sequence. Length=306 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 GGCATCGGGGGCGTAACGCCC 21 ||||||||||||| ||||||| Sbjct 250 GGCATCGGGGGCGCAACGCCC 270 Query= pta-miR159c MIMAT0004992 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= pta-miR408 MIMAT0005001 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stres... 33.7 0.055 gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatm... 33.7 0.055 gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulga... 33.7 0.055 gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023F10r, mRNA sequence. Length=452 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 3-PRIME, mRNA sequence. Length=645 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 573 TGCACTGCCTCTTCCCTG 590 >gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 5-PRIME, mRNA sequence. Length=623 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 95 TGCACTGCCTCTTCCCTG 78 >gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDNA clone HM09J22 5-PRIME, mRNA sequence. Length=653 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA03K02 5-PRIME, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ011_P12 5', mRNA sequence. Length=340 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 115 TGCACTGCCTCTTCCCTG 98 >gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_K17 5', mRNA sequence. Length=380 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 96 TGCACTGCCTCTTCCCTG 79 >gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM02I05 5-PRIME, mRNA sequence. Length=537 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 119 TGCACTGCCTCTTCCCTG 102 >gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC05A10_T3.ab1 similar to (AC087181) putative basic protein [Oryza sativa], mRNA sequence. Length=792 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0009H16f, mRNA sequence. Length=814 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGCACTGCCTCTTCCCTG 19 |||||||||||||||||| Sbjct 122 TGCACTGCCTCTTCCCTG 105 Query= ppt-miR166k MIMAT0005047 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 35.6 0.016 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 CGGACCAGGCTTCATTCCC 21 ||||||||||||||||||| Sbjct 139 CGGACCAGGCTTCATTCCC 157 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 CGGACCAGGCTTCATTCCC 21 ||||||||||||||||||| Sbjct 137 CGGACCAGGCTTCATTCCC 155 Query= ppt-miR160e MIMAT0005034 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot... 37.4 0.004 gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot ... 37.4 0.004 gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot ... 35.6 0.016 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCCTGTATGCCA 21 ||||||||||||||||||||| Sbjct 324 TGCCTGGCTCCCTGTATGCCA 344 >gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot (cold stress) cDNA library HVSMEa (HVcDNA0001)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0006E20r, mRNA sequence. Length=618 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 264 TGCCTGGCTCCCTGTATGCC 245 >gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDNA clone HF11D06 5-PRIME, mRNA sequence. Length=592 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 208 TGCCTGGCTCCCTGTATGCC 189 >dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal40b20 5', mRNA sequence. Length=596 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 388 TGCCTGGCTCCCTGTATGCC 369 >dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28l21 5', mRNA sequence. Length=479 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal19d14 5', mRNA sequence. Length=481 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal37e08 5', mRNA sequence. Length=543 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal23a17 5', mRNA sequence. Length=560 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i18 5', mRNA sequence. Length=482 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 378 TGCCTGGCTCCCTGTATGCC 359 >dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i09 5', mRNA sequence. Length=412 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 349 TGCCTGGCTCCCTGTATGCC 330 >dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal5g15 5', mRNA sequence. Length=608 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 341 TGCCTGGCTCCCTGTATGCC 322 >dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal2f23 5', mRNA sequence. Length=479 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K04f, mRNA sequence. Length=849 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 264 TGCCTGGCTCCCTGTATGCC 245 >gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K14f, mRNA sequence. Length=875 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGC 19 ||||||||||||||||||| Sbjct 279 TGCCTGGCTCCCTGTATGC 261 Query= ppt-miR1030d MIMAT0005126 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY853509.1| BY853509 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY852800.1| BY852800 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY852282.1| BY852282 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY851294.1| BY851294 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY849751.1| BY849751 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY849424.1| BY849424 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|BU997080.1| HI06N15r HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatm... 33.7 0.055 gb|BQ470201.1| HX02B17r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgar... 33.7 0.055 gb|BF617675.2| HVSMEc0018K06f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >dbj|BY853509.1| BY853509 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast73c11 5', mRNA sequence. Length=416 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 86 TCTCCATCTGCACCTGCACCA 66 >dbj|BY852800.1| BY852800 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast61b09 5', mRNA sequence. Length=447 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 52 TCTCCATCTGCACCTGCACCA 32 >dbj|BY852282.1| BY852282 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast52h12 5', mRNA sequence. Length=399 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 52 TCTCCATCTGCACCTGCACCA 32 >dbj|BY851294.1| BY851294 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast37d11 5', mRNA sequence. Length=449 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 280 TCTCCATCTGCACCTGCACCA 260 >dbj|BY849751.1| BY849751 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast12d11 5', mRNA sequence. Length=244 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 220 TCTCCATCTGCACCTGCACCA 200 >dbj|BY849424.1| BY849424 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast08d09 5', mRNA sequence. Length=239 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 57 TCTCCATCTGCACCTGCACCA 37 >gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN003P23 3-PRIME, mRNA sequence. Length=299 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 262 CTGCATCTGCACCTGCAC 279 >gb|BU997080.1| HI06N15r HI Hordeum vulgare subsp. vulgare cDNA clone HI06N15 5-PRIME, mRNA sequence. Length=584 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 27 TCTCCATCTGCACCTGCACCA 7 >gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatment, cv Optic, EBma07 Hordeum vulgare subsp. vulgare cDNA clone EBma07_SQ002_P10 5', mRNA sequence. Length=489 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 110 CTGCATCTGCACCTGCAC 93 >gb|BQ470201.1| HX02B17r HX Hordeum vulgare subsp. vulgare cDNA clone HX02B17 5-PRIME, mRNA sequence. Length=603 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 111 TCTCCATCTGCACCTGCACCA 91 >emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200056G09F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 217 CTGCATCTGCACCTGCAC 200 >gb|BF617675.2| HVSMEc0018K06f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0018K06f, mRNA sequence. Length=816 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCTGCATCTGCACCTGCACCA 21 ||| ||||||||||||||||| Sbjct 237 TCTCCATCTGCACCTGCACCA 217 Query= ppt-miR529d MIMAT0005057 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 35.6 0.016 gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, st... 33.7 0.055 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAGC 19 ||||||||||||||||||| Sbjct 538 AGAAGAGAGAGAGCACAGC 520 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAGC 19 ||||||||||||||||||| Sbjct 199 AGAAGAGAGAGAGCACAGC 181 >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAGCCC 21 |||||||||||||||||| || Sbjct 390 AGAAGAGAGAGAGCACAGTCC 370 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAAGAGAGAGAGCACAGCCC 21 |||||||||||||||||| || Sbjct 438 AGAAGAGAGAGAGCACAGTCC 458 >gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 AGAAGAGAGAGAGCACAG 18 |||||||||||||||||| Sbjct 331 AGAAGAGAGAGAGCACAG 348 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAAGAGAGAGAGCACAGCCC 21 |||||||||||||||||| || Sbjct 452 AGAAGAGAGAGAGCACAGTCC 472 >gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11D21, mRNA sequence. Length=552 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAG 18 |||||||||||||||||| Sbjct 256 AGAAGAGAGAGAGCACAG 239 >gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02 5-PRIME, mRNA sequence. Length=515 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAG 18 |||||||||||||||||| Sbjct 454 AGAAGAGAGAGAGCACAG 437 >dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah43j04 5', mRNA sequence. Length=418 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAG 18 |||||||||||||||||| Sbjct 340 AGAAGAGAGAGAGCACAG 323 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAAGAGAGAGAGCACAGCCC 21 |||||||||||||||||| || Sbjct 394 AGAAGAGAGAGAGCACAGTCC 374 Query= ppt-miR529g MIMAT0005060 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 37.4 0.004 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 37.4 0.004 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 37.4 0.004 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 37.4 0.004 gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, st... 35.6 0.016 ALIGNMENTS >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGTCC 21 |||||||||||||||||||| Sbjct 389 GAAGAGAGAGAGCACAGTCC 370 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 GAAGAGAGAGAGCACAGTCC 21 |||||||||||||||||||| Sbjct 439 GAAGAGAGAGAGCACAGTCC 458 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 GAAGAGAGAGAGCACAGTCC 21 |||||||||||||||||||| Sbjct 453 GAAGAGAGAGAGCACAGTCC 472 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGTCC 21 |||||||||||||||||||| Sbjct 393 GAAGAGAGAGAGCACAGTCC 374 >gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02, mRNA sequence. Length=700 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 GAAGAGAGAGAGCACAGTC 20 ||||||||||||||||||| Sbjct 332 GAAGAGAGAGAGCACAGTC 350 >gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11D21, mRNA sequence. Length=552 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGTC 20 ||||||||||||||||||| Sbjct 255 GAAGAGAGAGAGCACAGTC 237 >gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02 5-PRIME, mRNA sequence. Length=515 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGTC 20 ||||||||||||||||||| Sbjct 453 GAAGAGAGAGAGCACAGTC 435 >dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah43j04 5', mRNA sequence. Length=418 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGTC 20 ||||||||||||||||||| Sbjct 339 GAAGAGAGAGAGCACAGTC 321 Query= ppt-miR156c MIMAT0004346 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot ... 37.4 0.004 ALIGNMENTS >gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0016B08f, mRNA sequence. Length=624 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGTGAGCAC 20 |||||||||||||||||||| Sbjct 231 TGACAGAAGAGAGTGAGCAC 250 Query= ppt-miR414 MIMAT0004357 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH225226.1| HVSMEl0022E13f2 Hordeum vulgare spike (Fusariu... 37.4 0.004 gb|BI950673.1| HVSMEl0022E13f Hordeum vulgare spike EST libra... 37.4 0.004 gb|EX586491.1| HDP38L04w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|BQ754240.1| EBca01_SQ003_E17_R carpel, pre-anthesis, no tr... 33.7 0.055 gb|BQ461123.1| HE01C11r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|GH225226.1| HVSMEl0022E13f2 Hordeum vulgare spike (Fusarium infected) cDNA library HVSMEl (HVcDNA0012)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0039F15r, mRNA sequence. Length=610 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 CATCCTCATCATCCTCGTCC 21 |||||||||||||||||||| Sbjct 76 CATCCTCATCATCCTCGTCC 95 >gb|BI950673.1| HVSMEl0022E13f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0022E13f, mRNA sequence. Length=867 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 CATCCTCATCATCCTCGTCC 21 |||||||||||||||||||| Sbjct 87 CATCCTCATCATCCTCGTCC 106 >gb|EX586491.1| HDP38L04w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP38L04, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCCTCG 18 |||||||||||||||||| Sbjct 18 TCATCCTCATCATCCTCG 1 >gb|BQ754240.1| EBca01_SQ003_E17_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ003_E17 5', mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCCTCGTCC 21 ||||| ||||||||||||||| Sbjct 220 TCATCTTCATCATCCTCGTCC 200 >gb|BQ461123.1| HE01C11r HE Hordeum vulgare subsp. vulgare cDNA clone HE01C11 5-PRIME, mRNA sequence. Length=274 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCCTCGTCC 21 ||||||||||||||||| ||| Sbjct 143 TCATCCTCATCATCCTCCTCC 123 Query= ppt-miR160i MIMAT0005038 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot... 35.6 0.016 gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot ... 35.6 0.016 gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 GCCTGGCTCCCTGTATGCCA 21 |||||||||||||||||||| Sbjct 325 GCCTGGCTCCCTGTATGCCA 344 >gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot (cold stress) cDNA library HVSMEa (HVcDNA0001)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0006E20r, mRNA sequence. Length=618 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 263 GCCTGGCTCCCTGTATGCC 245 >gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDNA clone HF11D06 5-PRIME, mRNA sequence. Length=592 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 207 GCCTGGCTCCCTGTATGCC 189 >dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal40b20 5', mRNA sequence. Length=596 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 387 GCCTGGCTCCCTGTATGCC 369 >dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28l21 5', mRNA sequence. Length=479 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 376 GCCTGGCTCCCTGTATGCC 358 >dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal19d14 5', mRNA sequence. Length=481 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 376 GCCTGGCTCCCTGTATGCC 358 >dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal37e08 5', mRNA sequence. Length=543 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 376 GCCTGGCTCCCTGTATGCC 358 >dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal23a17 5', mRNA sequence. Length=560 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 376 GCCTGGCTCCCTGTATGCC 358 >dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i18 5', mRNA sequence. Length=482 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 377 GCCTGGCTCCCTGTATGCC 359 >dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i09 5', mRNA sequence. Length=412 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 348 GCCTGGCTCCCTGTATGCC 330 >dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal5g15 5', mRNA sequence. Length=608 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 340 GCCTGGCTCCCTGTATGCC 322 >dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal2f23 5', mRNA sequence. Length=479 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 376 GCCTGGCTCCCTGTATGCC 358 >gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K04f, mRNA sequence. Length=849 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGCC 20 ||||||||||||||||||| Sbjct 263 GCCTGGCTCCCTGTATGCC 245 >gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K14f, mRNA sequence. Length=875 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GCCTGGCTCCCTGTATGC 19 |||||||||||||||||| Sbjct 278 GCCTGGCTCCCTGTATGC 261 Query= ppt-miR408b MIMAT0005050 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stres... 33.7 0.055 gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatm... 33.7 0.055 gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulga... 33.7 0.055 gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023F10r, mRNA sequence. Length=452 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 3-PRIME, mRNA sequence. Length=645 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 573 TGCACTGCCTCTTCCCTG 590 >gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 5-PRIME, mRNA sequence. Length=623 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 95 TGCACTGCCTCTTCCCTG 78 >gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDNA clone HM09J22 5-PRIME, mRNA sequence. Length=653 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA03K02 5-PRIME, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ011_P12 5', mRNA sequence. Length=340 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 115 TGCACTGCCTCTTCCCTG 98 >gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_K17 5', mRNA sequence. Length=380 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 96 TGCACTGCCTCTTCCCTG 79 >gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM02I05 5-PRIME, mRNA sequence. Length=537 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 119 TGCACTGCCTCTTCCCTG 102 >gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC05A10_T3.ab1 similar to (AC087181) putative basic protein [Oryza sativa], mRNA sequence. Length=792 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0009H16f, mRNA sequence. Length=814 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 122 TGCACTGCCTCTTCCCTG 105 Query= ppt-miR529c MIMAT0005056 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 33.7 0.055 ALIGNMENTS >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGC 19 |||||||||||||||||| Sbjct 537 GAAGAGAGAGAGCACAGC 520 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GAAGAGAGAGAGCACAGC 19 |||||||||||||||||| Sbjct 198 GAAGAGAGAGAGCACAGC 181 Query= ppt-miR1030i MIMAT0005131 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatm... 33.7 0.055 emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgar... 33.7 0.055 ALIGNMENTS >gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN003P23 3-PRIME, mRNA sequence. Length=299 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 262 CTGCATCTGCACCTGCAC 279 >gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatment, cv Optic, EBma07 Hordeum vulgare subsp. vulgare cDNA clone EBma07_SQ002_P10 5', mRNA sequence. Length=489 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 110 CTGCATCTGCACCTGCAC 93 >emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200056G09F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 217 CTGCATCTGCACCTGCAC 200 Query= ppt-miR171b MIMAT0004376 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTGAGCCGCGCCAATATCACA 21 |||||||||||||||||| || Sbjct 256 TTGAGCCGCGCCAATATCTCA 236 Query= ppt-miR1030j MIMAT0005132 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD525982.1| RUS83A04w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|CX627717.1| GBN006B16u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|CB868672.1| HC09A17w CH Hordeum vulgare cDNA clone HC09A17... 33.7 0.055 gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatm... 33.7 0.055 emb|AJ475105.1| AJ475105 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ475104.1| AJ475104 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ475103.1| AJ475103 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ474302.1| AJ474302 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgar... 33.7 0.055 gb|BE196524.1| HVSMEh0092I16f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 ALIGNMENTS >gb|FD525982.1| RUS83A04w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37M05, mRNA sequence. Length=526 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 354 CCTGCACCTGCACCTGCACCA 374 >gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN003P23 3-PRIME, mRNA sequence. Length=299 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 262 CTGCATCTGCACCTGCAC 279 >gb|CX627717.1| GBN006B16u GBN Hordeum vulgare cDNA clone GBN006B16 3-PRIME, mRNA sequence. Length=405 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 43 CCTGCACCTGCACCTGCACCA 23 >gb|CB868672.1| HC09A17w CH Hordeum vulgare cDNA clone HC09A17 5-PRIME, mRNA sequence. Length=473 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 56 CCTGCACCTGCACCTGCACCA 36 >gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatment, cv Optic, EBma07 Hordeum vulgare subsp. vulgare cDNA clone EBma07_SQ002_P10 5', mRNA sequence. Length=489 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 110 CTGCATCTGCACCTGCAC 93 >emb|AJ475105.1| AJ475105 S00008 Hordeum vulgare cDNA clone S0000800243F08F1, mRNA sequence. Length=360 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 223 CCTGCACCTGCACCTGCACCA 203 >emb|AJ475104.1| AJ475104 S00008 Hordeum vulgare cDNA clone S0000800243D01F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 223 CCTGCACCTGCACCTGCACCA 203 >emb|AJ475103.1| AJ475103 S00008 Hordeum vulgare cDNA clone S0000800243A01F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 223 CCTGCACCTGCACCTGCACCA 203 >emb|AJ474302.1| AJ474302 S00008 Hordeum vulgare cDNA clone S0000800242G12F1, mRNA sequence. Length=300 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 157 CCTGCACCTGCACCTGCACCA 137 >emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200056G09F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 217 CTGCATCTGCACCTGCAC 200 >gb|BE196524.1| HVSMEh0092I16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0092I16f, mRNA sequence. Length=962 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCTGCATCTGCACCTGCACCA 21 |||||| |||||||||||||| Sbjct 528 CCTGCACCTGCACCTGCACCA 508 Query= ppt-miR160g MIMAT0005036 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCTTGTATGCCA 21 ||||||||||| ||||||||| Sbjct 324 TGCCTGGCTCCCTGTATGCCA 344 Query= ppt-miR1030h MIMAT0005130 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatm... 33.7 0.055 emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgar... 33.7 0.055 ALIGNMENTS >gb|CX632992.1| GBN003P23f GBN Hordeum vulgare cDNA clone GBN003P23 3-PRIME, mRNA sequence. Length=299 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 262 CTGCATCTGCACCTGCAC 279 >gb|BQ758674.1| EBma07_SQ002_P10_R maternal, 21 DPA, no treatment, cv Optic, EBma07 Hordeum vulgare subsp. vulgare cDNA clone EBma07_SQ002_P10 5', mRNA sequence. Length=489 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 110 CTGCATCTGCACCTGCAC 93 >emb|AJ462964.1| AJ462964 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200056G09F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CTGCATCTGCACCTGCAC 19 |||||||||||||||||| Sbjct 217 CTGCATCTGCACCTGCAC 200 Query= smo-miR156b MIMAT0005214 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 395 CTGACAGAAGAGAGAGAGCAC 375 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 433 CTGACAGAAGAGAGAGAGCAC 453 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 447 CTGACAGAAGAGAGAGAGCAC 467 >gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=599 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 188 CTGACAGAAGAGAGAGAGCAC 168 >gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=682 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 493 CTGACAGAAGAGAGAGAGCAC 513 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 399 CTGACAGAAGAGAGAGAGCAC 379 Query= smo-miR156a MIMAT0005213 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot ... 35.6 0.016 ALIGNMENTS >gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0016B08f, mRNA sequence. Length=624 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 GACAGAAGAGAGTGAGCAC 20 ||||||||||||||||||| Sbjct 232 GACAGAAGAGAGTGAGCAC 250 Query= smo-miR1099 MIMAT0005255 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH220133.1| HVSMEi0006J04f2 Hordeum vulgare 20 DAP spike c... 33.7 0.055 gb|BU982260.1| HA25P20r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BG366282.2| HVSMEi0006J04f Hordeum vulgare 20 DAP spike ES... 33.7 0.055 ALIGNMENTS >gb|GH220133.1| HVSMEi0006J04f2 Hordeum vulgare 20 DAP spike cDNA library HVSMEi (HVcDNA0010)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0029D10r, mRNA sequence. Length=523 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TAGCAATGGTGTTTTTGT 20 |||||||||||||||||| Sbjct 87 TAGCAATGGTGTTTTTGT 104 >gb|BU982260.1| HA25P20r HA Hordeum vulgare subsp. vulgare cDNA clone HA25P20 5-PRIME, mRNA sequence. Length=502 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TAGCAATGGTGTTTTTGT 20 |||||||||||||||||| Sbjct 203 TAGCAATGGTGTTTTTGT 220 >gb|BG366282.2| HVSMEi0006J04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0006J04f, mRNA sequence. Length=705 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TAGCAATGGTGTTTTTGT 20 |||||||||||||||||| Sbjct 87 TAGCAATGGTGTTTTTGT 104 Query= smo-miR408 MIMAT0005228 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stres... 33.7 0.055 gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatm... 33.7 0.055 gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulga... 33.7 0.055 gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023F10r, mRNA sequence. Length=452 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 3-PRIME, mRNA sequence. Length=645 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 573 TGCACTGCCTCTTCCCTG 590 >gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 5-PRIME, mRNA sequence. Length=623 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 95 TGCACTGCCTCTTCCCTG 78 >gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDNA clone HM09J22 5-PRIME, mRNA sequence. Length=653 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA03K02 5-PRIME, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 120 TGCACTGCCTCTTCCCTG 103 >gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ011_P12 5', mRNA sequence. Length=340 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 115 TGCACTGCCTCTTCCCTG 98 >gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_K17 5', mRNA sequence. Length=380 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 96 TGCACTGCCTCTTCCCTG 79 >gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM02I05 5-PRIME, mRNA sequence. Length=537 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 119 TGCACTGCCTCTTCCCTG 102 >gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC05A10_T3.ab1 similar to (AC087181) putative basic protein [Oryza sativa], mRNA sequence. Length=792 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 125 TGCACTGCCTCTTCCCTG 108 >gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0009H16f, mRNA sequence. Length=814 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCACTGCCTCTTCCCTG 18 |||||||||||||||||| Sbjct 122 TGCACTGCCTCTTCCCTG 105 Query= smo-miR156c MIMAT0005215 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 33.7 0.055 ALIGNMENTS >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTGACAGAAGAAAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 543 TTGACAGAAGAGAGAGAGCAC 523 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTGACAGAAGAAAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 204 TTGACAGAAGAGAGAGAGCAC 184 Query= smo-miR171a MIMAT0005223 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= ath-miR165a MIMAT0000187 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 33.7 0.055 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 33.7 0.055 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATCCCCC 21 |||||||||||||||| |||| Sbjct 138 TCGGACCAGGCTTCATTCCCC 158 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATCCCCC 21 |||||||||||||||| |||| Sbjct 136 TCGGACCAGGCTTCATTCCCC 156 Query= ath-miR414 MIMAT0001322 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|EX590142.1| HDP12O22w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|BU994327.1| HM06K18r HM Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|FD522834.1| RUS80C07w HF Hordeum vulgare subsp. vulgare cD... 35.6 0.016 dbj|BJ468040.1| BJ468040 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|BG368160.1| HVSMEi0016A20f Hordeum vulgare 20 DAP spike ES... 35.6 0.016 gb|GH226731.1| HVSMEm0019K04f2 Hordeum vulgare green seedling... 33.7 0.055 gb|GH222395.1| HVSMEk0013K24r2 Hordeum vulgare testa/pericarp... 33.7 0.055 gb|FD518768.1| RUS31D04w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|FD520280.1| RUS15H09w HA Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD517906.1| RUS48E05w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|EX573483.1| HDP27F13w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX591334.1| HDP07P20w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY842221.1| BY842221 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY840446.1| BY840446 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY845149.1| BY845149 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 gb|CX626649.1| GAN008B15u GAN Hordeum vulgare cDNA clone GAN0... 33.7 0.055 gb|CB881378.1| HM09K04w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB880263.1| HM05P24w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ825890.1| EST15 Barley leaf cDNA library Hordeum vulgare... 33.7 0.055 gb|BQ755505.1| EBed07_SQ002_F21_R endosperm, 28 DPA, no treat... 33.7 0.055 dbj|AV930239.1| AV930239 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV929203.1| AV929203 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV929202.1| AV929202 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV924108.1| AV924108 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV918210.1| AV918210 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BI956855.1| HVSMEn0005K21f Hordeum vulgare rachis EST libr... 33.7 0.055 gb|BI954758.1| HVSMEm0019K04f Hordeum vulgare green seedling ... 33.7 0.055 ALIGNMENTS >gb|EX590142.1| HDP12O22w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12O22, mRNA sequence. Length=699 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TCATCTTCATCATCATCGTC 20 |||||||||||||||||||| Sbjct 316 TCATCTTCATCATCATCGTC 297 >gb|BU994327.1| HM06K18r HM Hordeum vulgare subsp. vulgare cDNA clone HM06K18 5-PRIME, mRNA sequence. Length=628 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TCATCTTCATCATCATCGTC 20 |||||||||||||||||||| Sbjct 518 TCATCTTCATCATCATCGTC 499 >gb|FD522834.1| RUS80C07w HF Hordeum vulgare subsp. vulgare cDNA clone HF25B12, mRNA sequence. Length=633 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATCTTCATCATCATCGTCA 21 ||||||||||||||||||| Sbjct 581 ATCTTCATCATCATCGTCA 599 >dbj|BJ468040.1| BJ468040 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags30n10 3', mRNA sequence. Length=706 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATCTTCATCATCATCGTCA 21 ||||||||||||||||||| Sbjct 584 ATCTTCATCATCATCGTCA 602 >gb|BG368160.1| HVSMEi0016A20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0016A20f, mRNA sequence. Length=562 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATCTTCATCATCATCGTCA 21 ||||||||||||||||||| Sbjct 260 ATCTTCATCATCATCGTCA 242 >gb|GH226731.1| HVSMEm0019K04f2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0043A17r, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 102 TCATCTTCATCATCATCATCA 122 >gb|GH222395.1| HVSMEk0013K24r2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0034O09f, mRNA sequence. Length=517 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 295 TCATCTTCATCATCATCATCA 315 >gb|FD518768.1| RUS31D04w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB05L14, mRNA sequence. Length=681 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 || |||||||||||||||||| Sbjct 542 TCTTCTTCATCATCATCGTCA 562 >gb|FD520280.1| RUS15H09w HA Hordeum vulgare subsp. vulgare cDNA clone HA16H18, mRNA sequence. Length=693 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 402 TCATCTTCATCATCATCATCA 422 >gb|FD517906.1| RUS48E05w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB25K23, mRNA sequence. Length=692 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 || |||||||||||||||||| Sbjct 621 TCTTCTTCATCATCATCGTCA 641 >gb|EX573483.1| HDP27F13w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27F13, mRNA sequence. Length=376 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCTTCATCATCATCGTCA 21 ||||| ||||||||||||||| Sbjct 213 TCATCATCATCATCATCGTCA 193 >gb|EX591334.1| HDP07P20w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07P20, mRNA sequence. Length=492 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CATCTTCATCATCATCGT 19 |||||||||||||||||| Sbjct 19 CATCTTCATCATCATCGT 2 >dbj|BY842221.1| BY842221 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet67e04 5', mRNA sequence. Length=478 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 41 TCATCTTCATCATCATCATCA 61 >dbj|BY840446.1| BY840446 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet43h09 5', mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 24 TCATCTTCATCATCATCATCA 44 >dbj|BY845149.1| BY845149 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart15d07 5', mRNA sequence. Length=574 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 24 TCATCTTCATCATCATCATCA 44 >gb|CX626649.1| GAN008B15u GAN Hordeum vulgare cDNA clone GAN008B15 3-PRIME, mRNA sequence. Length=373 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 287 TCATCTTCATCATCATCATCA 307 >gb|CB881378.1| HM09K04w HM Hordeum vulgare subsp. vulgare cDNA clone HM09K04 3-PRIME, mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 294 TCATCTTCATCATCATCATCA 314 >gb|CB880263.1| HM05P24w HM Hordeum vulgare subsp. vulgare cDNA clone HM05P24 3-PRIME, mRNA sequence. Length=626 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 294 TCATCTTCATCATCATCATCA 314 >gb|BQ825890.1| EST15 Barley leaf cDNA library Hordeum vulgare subsp. spontaneum cDNA 3', mRNA sequence. Length=351 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCG 18 |||||||||||||||||| Sbjct 250 TCATCTTCATCATCATCG 267 >gb|BQ755505.1| EBed07_SQ002_F21_R endosperm, 28 DPA, no treatment, cv Optic, EBed07 Hordeum vulgare subsp. vulgare cDNA clone EBed07_SQ002_F21 5', mRNA sequence. Length=65 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCTTCATCATCATCGTCA 21 ||||| ||||||||||||||| Sbjct 29 TCATCATCATCATCATCGTCA 9 >dbj|AV930239.1| AV930239 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd21i19 3', mRNA sequence. Length=548 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 224 TCATCTTCATCATCATCATCA 244 >dbj|AV929203.1| AV929203 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd11g04 3', mRNA sequence. Length=780 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 || |||||||||||||||||| Sbjct 458 TCTTCTTCATCATCATCGTCA 478 >dbj|AV929202.1| AV929202 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd11g03 3', mRNA sequence. Length=777 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 || |||||||||||||||||| Sbjct 455 TCTTCTTCATCATCATCGTCA 475 >dbj|AV924108.1| AV924108 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd11g03 5', mRNA sequence. Length=619 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCTTCATCATCATCGTCA 21 || |||||||||||||||||| Sbjct 391 TCTTCTTCATCATCATCGTCA 371 >dbj|AV918210.1| AV918210 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags20e03 3', mRNA sequence. Length=713 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 392 TCATCTTCATCATCATCATCA 412 >gb|BI956855.1| HVSMEn0005K21f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005K21f, mRNA sequence. Length=826 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||| ||||||||||||||| Sbjct 790 TCATCATCATCATCATCGTCA 810 >gb|BI954758.1| HVSMEm0019K04f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0019K04f, mRNA sequence. Length=677 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCTTCATCATCATCGTCA 21 ||||||||||||||||| ||| Sbjct 102 TCATCTTCATCATCATCATCA 122 Query= ath-miR172c MIMAT0000922 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH213313.1| HVSMEb0013I05f2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|DN188672.1| HO19M04w HO Hordeum vulgare cDNA clone HO19M04... 33.7 0.055 gb|DN182702.1| HO19M04S HO Hordeum vulgare cDNA clone HO19M04... 33.7 0.055 gb|CD662228.1| UCRHV18_01ah05_b1 Drought-stressed Dicktoo bar... 33.7 0.055 gb|CB878060.1| HP07D01T HP Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB872382.1| HC07L20y CH Hordeum vulgare cDNA clone HC07L20... 33.7 0.055 gb|BQ464715.1| HU01A22T HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ462299.1| BJ462299 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ457290.1| BJ457290 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ454494.1| BJ454494 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ451082.1| BJ451082 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ449870.1| BJ449870 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BM816977.1| HC113B11_SK.ab1 HC Hordeum vulgare subsp. vulg... 33.7 0.055 dbj|AV912081.1| AV912081 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BI954904.1| HVSMEm0020F01f Hordeum vulgare green seedling ... 33.7 0.055 ALIGNMENTS >gb|GH213313.1| HVSMEb0013I05f2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0013K23r, mRNA sequence. Length=590 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 483 AGAATCCTGATGATGCTGCAG 463 >gb|DN188672.1| HO19M04w HO Hordeum vulgare cDNA clone HO19M04 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 409 AGAATCCTGATGATGCTGCAG 429 >gb|DN182702.1| HO19M04S HO Hordeum vulgare cDNA clone HO19M04 5-PRIME, mRNA sequence. Length=664 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 652 AGAATCCTGATGATGCTGCAG 632 >gb|CD662228.1| UCRHV18_01ah05_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_01ah05, mRNA sequence. Length=314 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 248 AGAATCCTGATGATGCTGCAG 268 >gb|CB878060.1| HP07D01T HP Hordeum vulgare subsp. vulgare cDNA clone HP07D01 5-PRIME, mRNA sequence. Length=598 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 201 AGAATCCTGATGATGCTGCAG 181 >gb|CB872382.1| HC07L20y CH Hordeum vulgare cDNA clone HC07L20 3-PRIME, mRNA sequence. Length=403 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 298 AGAATCCTGATGATGCTGCAG 318 >gb|BQ464715.1| HU01A22T HU Hordeum vulgare subsp. vulgare cDNA clone HU01A22 5-PRIME, mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 468 AGAATCCTGATGATGCTGCAG 448 >dbj|BJ462299.1| BJ462299 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak24k18 3', mRNA sequence. Length=652 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 398 AGAATCCTGATGATGCTGCAG 418 >dbj|BJ457290.1| BJ457290 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak27b05 3', mRNA sequence. Length=570 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 394 AGAATCCTGATGATGCTGCAG 414 >dbj|BJ454494.1| BJ454494 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak24k18 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 258 AGAATCCTGATGATGCTGCAG 238 >dbj|BJ451082.1| BJ451082 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak32j24 5', mRNA sequence. Length=644 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 333 AGAATCCTGATGATGCTGCAG 313 >dbj|BJ449870.1| BJ449870 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak27b05 5', mRNA sequence. Length=605 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 256 AGAATCCTGATGATGCTGCAG 236 >gb|BM816977.1| HC113B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC113B11_SK.ab1, mRNA sequence. Length=871 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 321 AGAATCCTGATGATGCTGCAG 301 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 457 AGAATCCTGATGATGCTGCAG 437 >dbj|AV912081.1| AV912081 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak2k18 3', mRNA sequence. Length=534 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 399 AGAATCCTGATGATGCTGCAG 419 >gb|BI954904.1| HVSMEm0020F01f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0020F01f, mRNA sequence. Length=672 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGAATCTTGATGATGCTGCAG 21 |||||| |||||||||||||| Sbjct 440 AGAATCCTGATGATGCTGCAG 420 Query= ath-miR399f MIMAT0000956 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 35.6 0.016 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCC 19 ||||||||||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCC 333 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GCCAAAGGAGATTTGCCC 19 |||||||||||||||||| Sbjct 241 GCCAAAGGAGATTTGCCC 224 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= ath-miR397a MIMAT0000946 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22... 33.7 0.055 gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp ... 33.7 0.055 ALIGNMENTS >gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB02L08, mRNA sequence. Length=455 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 176 TTGAGTGCAGCGTTGATG 193 >gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDNA clone HT11F23 5-PRIME, mRNA sequence. Length=589 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 454 TTGAGTGCAGCGTTGATG 437 >gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 5-PRIME, mRNA sequence. Length=273 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 58 TTGAGTGCAGCGTTGATG 41 >gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 3-PRIME, mRNA sequence. Length=274 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 217 TTGAGTGCAGCGTTGATG 234 >gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02L08 5-PRIME, mRNA sequence. Length=385 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02E14 5-PRIME, mRNA sequence. Length=389 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDNA clone HX02N11 3-PRIME, mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 199 TTGAGTGCAGCGTTGATG 216 >gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22 5-PRIME, mRNA sequence. Length=468 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 305 TTGAGTGCAGCGTTGATG 288 >gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_O24 5', mRNA sequence. Length=239 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 87 TTGAGTGCAGCGTTGATG 70 >gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0008M01f, mRNA sequence. Length=462 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 265 TTGAGTGCAGCGTTGATG 248 Query= ath-miR159a MIMAT0000177 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 37.4 0.004 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 37.4 0.004 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 22 TTTGGATTGAAGGGAGCTCT 41 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 222 TTTGGATTGAAGGGAGCTCT 203 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 376 TTTGGATTGAAGGGAGCTCT 395 Query= ath-miR399d MIMAT0000954 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 39.2 0.001 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCCCG 21 ||||||||||||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCCCG 331 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GCCAAAGGAGATTTGCCC 19 |||||||||||||||||| Sbjct 241 GCCAAAGGAGATTTGCCC 224 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= ath-miR399a MIMAT0000951 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 35.6 0.016 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 GCCAAAGGAGATTTGCCCT 20 ||||||||||||||||||| Sbjct 241 GCCAAAGGAGATTTGCCCT 223 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCC 19 ||||||||||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCC 333 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= ath-miR157b MIMAT0000173 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 33.7 0.055 ALIGNMENTS >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 543 TTGACAGAAGAGAGAGAGCAC 523 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTGACAGAAGATAGAGAGCAC 21 ||||||||||| ||||||||| Sbjct 204 TTGACAGAAGAGAGAGAGCAC 184 Query= ath-miR171a MIMAT0000202 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGATTGAGCCGCGCCAATATC 21 ||||||||||||||||||||| Sbjct 259 TGATTGAGCCGCGCCAATATC 239 >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGATTGAGCCGCGCCAATATC 21 ||||||||||| ||||||||| Sbjct 394 TGATTGAGCCGTGCCAATATC 414 Query= ath-miR393a MIMAT0000934 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum... 33.7 0.055 gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06... 33.7 0.055 gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv... 33.7 0.055 emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 ALIGNMENTS >gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0011D18f, mRNA sequence. Length=542 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 344 TCCAAAGGGATCGCATTG 361 >gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL118a3 5' similar to similar to Arabidopsis thaliana transport inhibitor response 1, mRNA sequence. Length=688 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 54 TCCAAAGGGATCGCATTG 37 >gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06 5-PRIME, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 587 TCCAAAGGGATCGCATTG 570 >gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDNA clone HS18D14 5-PRIME, mRNA sequence. Length=419 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 50 TCCAAAGGGATCGCATTG 33 >gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDNA clone HB24C09 5-PRIME, mRNA sequence. Length=501 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 439 TCCAAAGGGATCGCATTG 422 >dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 3', mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 532 TCCAAAGGGATCGCATTG 549 >dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 564 TCCAAAGGGATCGCATTG 547 >emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0001100015F03F1, mRNA sequence. Length=657 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 217 TCCAAAGGGATCGCATTG 200 >gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0102P10f, mRNA sequence. Length=529 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 323 TCCAAAGGGATCGCATTG 306 Query= ath-miR394b MIMAT0000937 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|EX600346.1| HDP38K16w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX595259.1| HDP28B09w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|CK566049.1| HO02E24w HO Hordeum vulgare cDNA clone HO02E24... 37.4 0.004 gb|CB882077.1| HM11M19w HM Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 dbj|BJ460700.1| BJ460700 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV927829.1| AV927829 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV923121.1| AV923121 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|AW982846.2| HVSMEg0004F22f Hordeum vulgare pre-anthesis sp... 37.4 0.004 ALIGNMENTS >gb|EX600346.1| HDP38K16w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP38K16, mRNA sequence. Length=634 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 72 TTGGCATTCTGTCCACCTCC 53 >gb|EX595259.1| HDP28B09w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28B09, mRNA sequence. Length=669 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 110 TTGGCATTCTGTCCACCTCC 91 >gb|CK566049.1| HO02E24w HO Hordeum vulgare cDNA clone HO02E24 3-PRIME, mRNA sequence. Length=700 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 619 TTGGCATTCTGTCCACCTCC 638 >gb|CB882077.1| HM11M19w HM Hordeum vulgare subsp. vulgare cDNA clone HM11M19 3-PRIME, mRNA sequence. Length=548 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 352 TTGGCATTCTGTCCACCTCC 371 >dbj|BJ460700.1| BJ460700 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak41o03 3', mRNA sequence. Length=766 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 583 TTGGCATTCTGTCCACCTCC 602 >dbj|AV927829.1| AV927829 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd3o05 3', mRNA sequence. Length=660 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 608 TTGGCATTCTGTCCACCTCC 627 >dbj|AV923121.1| AV923121 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd3o05 5', mRNA sequence. Length=620 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 422 TTGGCATTCTGTCCACCTCC 403 >gb|AW982846.2| HVSMEg0004F22f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0004F22f, mRNA sequence. Length=909 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTGGCATTCTGTCCACCTCC 20 |||||||||||||||||||| Sbjct 491 TTGGCATTCTGTCCACCTCC 472 Query= ath-miR171c MIMAT0000921 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= ath-miR159b MIMAT0000207 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 37.4 0.004 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 37.4 0.004 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 22 TTTGGATTGAAGGGAGCTCT 41 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 222 TTTGGATTGAAGGGAGCTCT 203 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCT 20 |||||||||||||||||||| Sbjct 376 TTTGGATTGAAGGGAGCTCT 395 Query= ath-miR399e MIMAT0000955 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCTCG 21 |||||||||||||||||| || Sbjct 351 TGCCAAAGGAGATTTGCCCCG 331 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= ath-miR170 MIMAT0000201 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGATTGAGCCGTGTCAATATC 21 ||||||||||||| ||||||| Sbjct 394 TGATTGAGCCGTGCCAATATC 414 Query= ath-miR164c MIMAT0001017 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV836807.1| AV836807 K. Sato unpublished cDNA library: Ho... 33.7 0.055 gb|BF256424.2| HVSMEf0009J12f Hordeum vulgare seedling root E... 33.7 0.055 emb|AL503516.1| AL503516 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 ALIGNMENTS >dbj|AV836807.1| AV836807 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare seedling leaves second leaf stage Hordeum vulgare subsp. vulgare cDNA clone basd3m15, mRNA sequence. Length=628 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCG 21 |||||||||||| |||||||| Sbjct 592 TGGAGAAGCAGGTCACGTGCG 612 >gb|BF256424.2| HVSMEf0009J12f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0009J12f, mRNA sequence. Length=870 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACGTGCG 21 |||||||||||| |||||||| Sbjct 358 TGGAGAAGCAGGTCACGTGCG 338 >emb|AL503516.1| AL503516 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW02G21 5', mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACGTGCG 21 |||||||||||| |||||||| Sbjct 526 TGGAGAAGCAGGTCACGTGCG 506 Query= ath-miR159c MIMAT0001015 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 35.6 0.016 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 35.6 0.016 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 22 TTTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTGGATTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 222 TTTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 376 TTTGGATTGAAGGGAGCTC 394 Query= bna-miR393 MIMAT0004447 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum... 33.7 0.055 gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06... 33.7 0.055 gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv... 33.7 0.055 emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 ALIGNMENTS >gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0011D18f, mRNA sequence. Length=542 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 344 TCCAAAGGGATCGCATTG 361 >gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL118a3 5' similar to similar to Arabidopsis thaliana transport inhibitor response 1, mRNA sequence. Length=688 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 54 TCCAAAGGGATCGCATTG 37 >gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06 5-PRIME, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 587 TCCAAAGGGATCGCATTG 570 >gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDNA clone HS18D14 5-PRIME, mRNA sequence. Length=419 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 50 TCCAAAGGGATCGCATTG 33 >gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDNA clone HB24C09 5-PRIME, mRNA sequence. Length=501 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 439 TCCAAAGGGATCGCATTG 422 >dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 3', mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 532 TCCAAAGGGATCGCATTG 549 >dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 564 TCCAAAGGGATCGCATTG 547 >emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0001100015F03F1, mRNA sequence. Length=657 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 217 TCCAAAGGGATCGCATTG 200 >gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0102P10f, mRNA sequence. Length=529 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 323 TCCAAAGGGATCGCATTG 306 Query= bna-miR397b MIMAT0005601 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22... 33.7 0.055 gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp ... 33.7 0.055 ALIGNMENTS >gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB02L08, mRNA sequence. Length=455 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 176 TTGAGTGCAGCGTTGATG 193 >gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDNA clone HT11F23 5-PRIME, mRNA sequence. Length=589 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 454 TTGAGTGCAGCGTTGATG 437 >gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 5-PRIME, mRNA sequence. Length=273 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 58 TTGAGTGCAGCGTTGATG 41 >gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 3-PRIME, mRNA sequence. Length=274 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 217 TTGAGTGCAGCGTTGATG 234 >gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02L08 5-PRIME, mRNA sequence. Length=385 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02E14 5-PRIME, mRNA sequence. Length=389 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDNA clone HX02N11 3-PRIME, mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 199 TTGAGTGCAGCGTTGATG 216 >gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22 5-PRIME, mRNA sequence. Length=468 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 305 TTGAGTGCAGCGTTGATG 288 >gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_O24 5', mRNA sequence. Length=239 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 87 TTGAGTGCAGCGTTGATG 70 >gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0008M01f, mRNA sequence. Length=462 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 265 TTGAGTGCAGCGTTGATG 248 Query= bna-miR156a MIMAT0004445 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot ... 39.2 0.001 gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, st... 33.7 0.055 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 33.7 0.055 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0016B08f, mRNA sequence. Length=624 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||||||||||| Sbjct 231 TGACAGAAGAGAGTGAGCACA 251 >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 394 TGACAGAAGAGAGAGAGCACA 374 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 434 TGACAGAAGAGAGAGAGCACA 454 >gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 327 TGACAGAAGAGAGAGAGCACA 347 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 448 TGACAGAAGAGAGAGAGCACA 468 >gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11D21, mRNA sequence. Length=552 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 260 TGACAGAAGAGAGAGAGCACA 240 >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 542 TGACAGAAGAGAGAGAGCACA 522 >gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02 5-PRIME, mRNA sequence. Length=515 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 458 TGACAGAAGAGAGAGAGCACA 438 >dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah43j04 5', mRNA sequence. Length=418 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 344 TGACAGAAGAGAGAGAGCACA 324 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 203 TGACAGAAGAGAGAGAGCACA 183 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGTGAGCACA 21 ||||||||||||| ||||||| Sbjct 398 TGACAGAAGAGAGAGAGCACA 378 Query= bna-miR171g MIMAT0004446 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 41.0 4e-04 gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 TGATTGAGCCGCGCCAATATCT 22 |||||||||||||||||||||| Sbjct 259 TGATTGAGCCGCGCCAATATCT 238 >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TGATTGAGCCGCGCCAATATCT 22 ||||||||||| |||||||||| Sbjct 394 TGATTGAGCCGTGCCAATATCT 415 Query= gma-miR1528 MIMAT0007390 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|BE196454.3| HVSMEh0092F11f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 ALIGNMENTS >gb|BE196454.3| HVSMEh0092F11f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0092F11f, mRNA sequence. Length=988 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 ATAGATTAGATCAATATATTAGT 23 ||||||||||||||| | ||||| Sbjct 160 ATAGATTAGATCAATTTCTTAGT 182 Query= gma-miR1533 MIMAT0007396 Length=19 Score E Sequences producing significant alignments: (Bits) Value gb|EX591095.1| HDP08F11w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX582096.1| HDP17F19w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX582095.1| HDP17F19T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 ALIGNMENTS >gb|EX591095.1| HDP08F11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08F11, mRNA sequence. Length=494 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TAATAAAAATAATAATGA 19 |||||||||||||||||| Sbjct 471 TAATAAAAATAATAATGA 488 >gb|EX582096.1| HDP17F19w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP17F19, mRNA sequence. Length=448 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TAATAAAAATAATAATGA 19 |||||||||||||||||| Sbjct 419 TAATAAAAATAATAATGA 436 >gb|EX582095.1| HDP17F19T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP17F19, mRNA sequence. Length=452 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TAATAAAAATAATAATGA 19 |||||||||||||||||| Sbjct 19 TAATAAAAATAATAATGA 2 Query= gma-miR156b MIMAT0001692 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 39.2 0.001 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 39.2 0.001 gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cD... 39.2 0.001 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 39.2 0.001 gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare c... 39.2 0.001 gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, st... 39.2 0.001 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 39.2 0.001 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 39.2 0.001 gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|GH228608.1| HVSMEn0021E17f2 Hordeum vulgare rachis cDNA li... 35.6 0.016 gb|BQ665502.1| HX03O09u HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ485673.1| BJ485673 K. Sato unpublished cDNA library, st... 35.6 0.016 dbj|AV910992.1| AV910992 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV909109.1| AV909109 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 394 TGACAGAAGAGAGAGAGCACA 374 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 434 TGACAGAAGAGAGAGAGCACA 454 >gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02, mRNA sequence. Length=700 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 327 TGACAGAAGAGAGAGAGCACA 347 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 448 TGACAGAAGAGAGAGAGCACA 468 >gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11D21, mRNA sequence. Length=552 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 260 TGACAGAAGAGAGAGAGCACA 240 >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 542 TGACAGAAGAGAGAGAGCACA 522 >gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02 5-PRIME, mRNA sequence. Length=515 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 458 TGACAGAAGAGAGAGAGCACA 438 >dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah43j04 5', mRNA sequence. Length=418 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 344 TGACAGAAGAGAGAGAGCACA 324 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 203 TGACAGAAGAGAGAGAGCACA 183 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||||||||||| Sbjct 398 TGACAGAAGAGAGAGAGCACA 378 >gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=599 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCAC 20 |||||||||||||||||||| Sbjct 187 TGACAGAAGAGAGAGAGCAC 168 >gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=682 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCAC 20 |||||||||||||||||||| Sbjct 494 TGACAGAAGAGAGAGAGCAC 513 >gb|GH228608.1| HVSMEn0021E17f2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0047F14r, mRNA sequence. Length=625 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 249 TGACAGAAGAGAGAGAGCA 231 >gb|BQ665502.1| HX03O09u HX Hordeum vulgare subsp. vulgare cDNA clone HX03O09 3-PRIME, mRNA sequence. Length=556 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 535 TGACAGAAGAGAGAGAGCA 553 >dbj|BJ485673.1| BJ485673 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah58a16 3', mRNA sequence. Length=638 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 480 TGACAGAAGAGAGAGAGCA 498 >dbj|AV910992.1| AV910992 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak11k01 3', mRNA sequence. Length=672 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 456 TGACAGAAGAGAGAGAGCA 474 >dbj|AV909109.1| AV909109 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak11k01 5', mRNA sequence. Length=599 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 240 TGACAGAAGAGAGAGAGCA 222 >gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0016B08f, mRNA sequence. Length=624 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCACA 21 ||||||||||||| ||||||| Sbjct 231 TGACAGAAGAGAGTGAGCACA 251 Query= gma-miR159c MIMAT0007352 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 ALIGNMENTS >gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H10 5-PRIME, mRNA sequence. Length=646 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCC 20 ||||||||||||||||||| Sbjct 621 TTGGAGTGAAGGGAGCTCC 603 >gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L14 5-PRIME, mRNA sequence. Length=672 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCC 20 ||||||||||||||||||| Sbjct 588 TTGGAGTGAAGGGAGCTCC 570 >emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0001100133A04F1, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCC 20 ||||||||||||||||||| Sbjct 37 TTGGAGTGAAGGGAGCTCC 19 >emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0001100075C07F1, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCC 20 ||||||||||||||||||| Sbjct 50 TTGGAGTGAAGGGAGCTCC 32 Query= gma-miR390a-3p MIMAT0007360 Length=20 Score E Sequences producing significant alignments: (Bits) Value emb|AL505279.1| AL505279 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 ALIGNMENTS >emb|AL505279.1| AL505279 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW07P13 5', mRNA sequence. Length=547 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 CGCTATCCATCCTGAGTT 18 |||||||||||||||||| Sbjct 39 CGCTATCCATCCTGAGTT 56 Query= gma-miR159b MIMAT0007351 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0... 37.4 0.004 emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0... 37.4 0.004 ALIGNMENTS >gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H10 5-PRIME, mRNA sequence. Length=646 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCCA 21 |||||||||||||||||||| Sbjct 621 TTGGAGTGAAGGGAGCTCCA 602 >gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L14 5-PRIME, mRNA sequence. Length=672 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCCA 21 |||||||||||||||||||| Sbjct 588 TTGGAGTGAAGGGAGCTCCA 569 >emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0001100133A04F1, mRNA sequence. Length=480 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCCA 21 |||||||||||||||||||| Sbjct 37 TTGGAGTGAAGGGAGCTCCA 18 >emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0001100075C07F1, mRNA sequence. Length=480 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTCCA 21 |||||||||||||||||||| Sbjct 50 TTGGAGTGAAGGGAGCTCCA 31 Query= mtr-miR171 MIMAT0001655 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGATTGAGTCGTGCCAATATC 21 |||||||| |||||||||||| Sbjct 394 TGATTGAGCCGTGCCAATATC 414 Query= mtr-miR399e MIMAT0001652 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 35.6 0.016 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCC 19 ||||||||||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCC 333 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GCCAAAGGAGATTTGCCC 19 |||||||||||||||||| Sbjct 241 GCCAAAGGAGATTTGCCC 224 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= ptc-miR171k MIMAT0003943 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GATTGAGCCGCGCCAATATC 21 |||||||||||||||||||| Sbjct 258 GATTGAGCCGCGCCAATATC 239 Query= ptc-miR169o MIMAT0001971 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH209055.1| HV_CEb0022E16r2 Hordeum vulgare (Blumeria chal... 33.7 0.055 gb|EX600178.1| HDP38G22T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX589523.1| HDP16M21T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|DN188642.1| HO19K21w HO Hordeum vulgare cDNA clone HO19K21... 33.7 0.055 gb|DN160484.1| GPN001J08u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 dbj|BJ474459.1| BJ474459 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ469257.1| BJ469257 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >gb|GH209055.1| HV_CEb0022E16r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEb (HVcDNA0005)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0005F11f, mRNA sequence. Length=574 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 181 AAGCCAAGGATGAGTTGCCTG 201 >gb|EX600178.1| HDP38G22T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP38G22, mRNA sequence. Length=638 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 154 AAGCCAAGGATGAGTTGCCTG 174 >gb|EX589523.1| HDP16M21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP16M21, mRNA sequence. Length=678 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 194 AAGCCAAGGATGAGTTGCCTG 214 >gb|DN188642.1| HO19K21w HO Hordeum vulgare cDNA clone HO19K21 3-PRIME, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 154 AAGCCAAGGATGAGTTGCCTG 174 >gb|DN160484.1| GPN001J08u GPN Hordeum vulgare cDNA clone GPN001J08 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 161 AAGCCAAGGATGAGTTGCCTG 181 >dbj|BJ474459.1| BJ474459 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal13o10 3', mRNA sequence. Length=639 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 140 AAGCCAAGGATGAGTTGCCTG 160 >dbj|BJ469257.1| BJ469257 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal13o10 5', mRNA sequence. Length=551 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AAGCCAAGGATGACTTGCCTG 21 ||||||||||||| ||||||| Sbjct 500 AAGCCAAGGATGAGTTGCCTG 480 Query= ptc-miR172i MIMAT0002001 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH213313.1| HVSMEb0013I05f2 Hordeum vulgare seedling shoot... 37.4 0.004 gb|DN188672.1| HO19M04w HO Hordeum vulgare cDNA clone HO19M04... 37.4 0.004 gb|DN182702.1| HO19M04S HO Hordeum vulgare cDNA clone HO19M04... 37.4 0.004 gb|CD662228.1| UCRHV18_01ah05_b1 Drought-stressed Dicktoo bar... 37.4 0.004 gb|CB878060.1| HP07D01T HP Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|CB872382.1| HC07L20y CH Hordeum vulgare cDNA clone HC07L20... 37.4 0.004 gb|BQ464715.1| HU01A22T HU Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 dbj|BJ462299.1| BJ462299 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ457290.1| BJ457290 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ454494.1| BJ454494 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ451082.1| BJ451082 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ449870.1| BJ449870 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|BM816977.1| HC113B11_SK.ab1 HC Hordeum vulgare subsp. vulg... 37.4 0.004 dbj|AV912081.1| AV912081 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|BI954904.1| HVSMEm0020F01f Hordeum vulgare green seedling ... 37.4 0.004 ALIGNMENTS >gb|GH213313.1| HVSMEb0013I05f2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0013K23r, mRNA sequence. Length=590 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 483 AGAATCCTGATGATGCTGCA 464 >gb|DN188672.1| HO19M04w HO Hordeum vulgare cDNA clone HO19M04 3-PRIME, mRNA sequence. Length=700 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 409 AGAATCCTGATGATGCTGCA 428 >gb|DN182702.1| HO19M04S HO Hordeum vulgare cDNA clone HO19M04 5-PRIME, mRNA sequence. Length=664 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 652 AGAATCCTGATGATGCTGCA 633 >gb|CD662228.1| UCRHV18_01ah05_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_01ah05, mRNA sequence. Length=314 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 248 AGAATCCTGATGATGCTGCA 267 >gb|CB878060.1| HP07D01T HP Hordeum vulgare subsp. vulgare cDNA clone HP07D01 5-PRIME, mRNA sequence. Length=598 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 201 AGAATCCTGATGATGCTGCA 182 >gb|CB872382.1| HC07L20y CH Hordeum vulgare cDNA clone HC07L20 3-PRIME, mRNA sequence. Length=403 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 298 AGAATCCTGATGATGCTGCA 317 >gb|BQ464715.1| HU01A22T HU Hordeum vulgare subsp. vulgare cDNA clone HU01A22 5-PRIME, mRNA sequence. Length=597 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 468 AGAATCCTGATGATGCTGCA 449 >dbj|BJ462299.1| BJ462299 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak24k18 3', mRNA sequence. Length=652 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 398 AGAATCCTGATGATGCTGCA 417 >dbj|BJ457290.1| BJ457290 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak27b05 3', mRNA sequence. Length=570 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 394 AGAATCCTGATGATGCTGCA 413 >dbj|BJ454494.1| BJ454494 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak24k18 5', mRNA sequence. Length=622 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 258 AGAATCCTGATGATGCTGCA 239 >dbj|BJ451082.1| BJ451082 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak32j24 5', mRNA sequence. Length=644 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 333 AGAATCCTGATGATGCTGCA 314 >dbj|BJ449870.1| BJ449870 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak27b05 5', mRNA sequence. Length=605 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 256 AGAATCCTGATGATGCTGCA 237 >gb|BM816977.1| HC113B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC113B11_SK.ab1, mRNA sequence. Length=871 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 321 AGAATCCTGATGATGCTGCA 302 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 457 AGAATCCTGATGATGCTGCA 438 >dbj|AV912081.1| AV912081 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak2k18 3', mRNA sequence. Length=534 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 399 AGAATCCTGATGATGCTGCA 418 >gb|BI954904.1| HVSMEm0020F01f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0020F01f, mRNA sequence. Length=672 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 AGAATCCTGATGATGCTGCA 20 |||||||||||||||||||| Sbjct 440 AGAATCCTGATGATGCTGCA 421 Query= ptc-miR164f MIMAT0001923 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD526177.1| RUS100E04w HZ Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX573215.1| HDP27L22T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX573211.1| HDP27L22w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|DN187448.1| HO25M19w HO Hordeum vulgare cDNA clone HO25M19... 33.7 0.055 gb|DN180933.1| HO25M19S HO Hordeum vulgare cDNA clone HO25M19... 33.7 0.055 gb|CK566882.1| HO04P03w HO Hordeum vulgare cDNA clone HO04P03... 33.7 0.055 gb|CK565851.1| HO01L09w HO Hordeum vulgare cDNA clone HO01L09... 33.7 0.055 gb|CB864307.1| HD05L07w HD Hordeum vulgare cDNA clone HD05L07... 33.7 0.055 gb|BU991009.1| HD05L07r HD Hordeum vulgare cDNA clone HD05L07... 33.7 0.055 ALIGNMENTS >gb|FD526177.1| RUS100E04w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53C04, mRNA sequence. Length=615 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 330 TGGAGAAGCAGGGCACTTGCT 350 >gb|EX573215.1| HDP27L22T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27L22, mRNA sequence. Length=664 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 496 TGGAGAAGCAGGGCACTTGCT 516 >gb|EX573211.1| HDP27L22w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27L22, mRNA sequence. Length=693 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 394 TGGAGAAGCAGGGCACTTGCT 374 >gb|DN187448.1| HO25M19w HO Hordeum vulgare cDNA clone HO25M19 3-PRIME, mRNA sequence. Length=606 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 362 TGGAGAAGCAGGGCACTTGCT 382 >gb|DN180933.1| HO25M19S HO Hordeum vulgare cDNA clone HO25M19 5-PRIME, mRNA sequence. Length=587 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 226 TGGAGAAGCAGGGCACTTGCT 206 >gb|CK566882.1| HO04P03w HO Hordeum vulgare cDNA clone HO04P03 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 430 TGGAGAAGCAGGGCACTTGCT 450 >gb|CK565851.1| HO01L09w HO Hordeum vulgare cDNA clone HO01L09 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 305 TGGAGAAGCAGGGCACTTGCT 325 >gb|CB864307.1| HD05L07w HD Hordeum vulgare cDNA clone HD05L07 3-PRIME, mRNA sequence. Length=556 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 481 TGGAGAAGCAGGGCACTTGCT 501 >gb|BU991009.1| HD05L07r HD Hordeum vulgare cDNA clone HD05L07 5-PRIME, mRNA sequence. Length=527 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACATGCT 21 |||||||||||||||| |||| Sbjct 48 TGGAGAAGCAGGGCACTTGCT 28 Query= ptc-miR399d MIMAT0002047 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCCAAAGAAGATTTGCCCCG 21 |||||||| |||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCCCG 331 Query= ptc-miR160h MIMAT0001914 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCCTGCATGCCA 21 |||||||||||||| |||||| Sbjct 324 TGCCTGGCTCCCTGTATGCCA 344 Query= ptc-miR171i MIMAT0001991 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGATTGAGCCGTGCCAATATC 21 ||||||||||||||||||||| Sbjct 394 TGATTGAGCCGTGCCAATATC 414 >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGATTGAGCCGTGCCAATATC 21 ||||||||||| ||||||||| Sbjct 259 TGATTGAGCCGCGCCAATATC 239 Query= ptc-miR160f MIMAT0001912 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCCTGAATGCCA 21 |||||||||||||| |||||| Sbjct 324 TGCCTGGCTCCCTGTATGCCA 344 Query= ptc-miR171d MIMAT0001986 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GATTGAGCCGCGCCAATATC 21 |||||||||||||||||||| Sbjct 258 GATTGAGCCGCGCCAATATC 239 Query= ptc-miR166n MIMAT0001937 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 35.6 0.016 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCC 156 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCC 154 Query= ptc-miR156k MIMAT0001900 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|EX576980.1| HDP06E24w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX593949.1| HDP06E24T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CB858958.1| HI08N13w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BF630636.2| HVSMEb0012I04f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|EX576980.1| HDP06E24w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP06E24, mRNA sequence. Length=446 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGGGAGCA 19 ||||||||||||||||||| Sbjct 142 TGACAGAAGAGAGGGAGCA 124 >gb|EX593949.1| HDP06E24T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP06E24, mRNA sequence. Length=424 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGGGAGCA 19 ||||||||||||||||||| Sbjct 300 TGACAGAAGAGAGGGAGCA 318 >gb|CB858958.1| HI08N13w HI Hordeum vulgare subsp. vulgare cDNA clone HI08N13 3-PRIME, mRNA sequence. Length=627 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGGGAGCA 19 ||||||||||||||||||| Sbjct 258 TGACAGAAGAGAGGGAGCA 276 >gb|BF630636.2| HVSMEb0012I04f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0012I04f, mRNA sequence. Length=419 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGGGAGC 18 |||||||||||||||||| Sbjct 206 TGACAGAAGAGAGGGAGC 189 Query= ptc-miR169z MIMAT0001982 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH222471.1| HVSMEk0014G01r2 Hordeum vulgare testa/pericarp... 33.7 0.055 gb|GH222470.1| HVSMEk0014G01f2 Hordeum vulgare testa/pericarp... 33.7 0.055 dbj|AV832521.1| AV832521 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >gb|GH222471.1| HVSMEk0014G01r2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0034M23f, mRNA sequence. Length=576 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AGCCAAGAATGATTTGCC 19 |||||||||||||||||| Sbjct 385 AGCCAAGAATGATTTGCC 402 >gb|GH222470.1| HVSMEk0014G01f2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0034M23r, mRNA sequence. Length=521 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 AGCCAAGAATGATTTGCC 19 |||||||||||||||||| Sbjct 214 AGCCAAGAATGATTTGCC 197 >dbj|AV832521.1| AV832521 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare leaves vegetative stage Hordeum vulgare subsp. vulgare cDNA clone baak4m22, mRNA sequence. Length=486 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 AGCCAAGAATGATTTGCC 19 |||||||||||||||||| Sbjct 131 AGCCAAGAATGATTTGCC 114 Query= ptc-miR171j MIMAT0001992 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GATTGAGCCGCGCCAATA 19 |||||||||||||||||| Sbjct 258 GATTGAGCCGCGCCAATA 241 Query= ptc-miR159d MIMAT0001904 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= ptc-miR397b MIMAT0002039 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22... 33.7 0.055 gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp ... 33.7 0.055 ALIGNMENTS >gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB02L08, mRNA sequence. Length=455 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 173 CCGTTGAGTGCAGCGTTGATG 193 >gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDNA clone HT11F23 5-PRIME, mRNA sequence. Length=589 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 457 CCGTTGAGTGCAGCGTTGATG 437 >gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 5-PRIME, mRNA sequence. Length=273 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 61 CCGTTGAGTGCAGCGTTGATG 41 >gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 3-PRIME, mRNA sequence. Length=274 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 214 CCGTTGAGTGCAGCGTTGATG 234 >gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02L08 5-PRIME, mRNA sequence. Length=385 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 316 CCGTTGAGTGCAGCGTTGATG 296 >gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02E14 5-PRIME, mRNA sequence. Length=389 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 316 CCGTTGAGTGCAGCGTTGATG 296 >gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDNA clone HX02N11 3-PRIME, mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 196 CCGTTGAGTGCAGCGTTGATG 216 >gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22 5-PRIME, mRNA sequence. Length=468 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 308 CCGTTGAGTGCAGCGTTGATG 288 >gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_O24 5', mRNA sequence. Length=239 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 90 CCGTTGAGTGCAGCGTTGATG 70 >gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0008M01f, mRNA sequence. Length=462 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CCATTGAGTGCAGCGTTGATG 21 || |||||||||||||||||| Sbjct 268 CCGTTGAGTGCAGCGTTGATG 248 Query= ptc-miR160g MIMAT0001913 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCCTGGATGCCA 21 |||||||||||||| |||||| Sbjct 324 TGCCTGGCTCCCTGTATGCCA 344 Query= ptc-miR827 MIMAT0006003 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH217971.1| HVSMEg0008P20f2 Hordeum vulgare pre-anthesis s... 35.6 0.016 dbj|BJ470052.1| BJ470052 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|AW983262.2| HVSMEg0008P20f Hordeum vulgare pre-anthesis sp... 35.6 0.016 ALIGNMENTS >gb|GH217971.1| HVSMEg0008P20f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023H15r, mRNA sequence. Length=626 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTAGATGACCATCAACGAA 19 ||||||||||||||||||| Sbjct 177 TTAGATGACCATCAACGAA 159 >dbj|BJ470052.1| BJ470052 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal15a14 5', mRNA sequence. Length=583 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTAGATGACCATCAACGAA 19 ||||||||||||||||||| Sbjct 165 TTAGATGACCATCAACGAA 147 >gb|AW983262.2| HVSMEg0008P20f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0008P20f, mRNA sequence. Length=905 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTAGATGACCATCAACGAA 19 ||||||||||||||||||| Sbjct 177 TTAGATGACCATCAACGAA 159 Query= ptc-miR159f MIMAT0001906 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 ALIGNMENTS >gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H10 5-PRIME, mRNA sequence. Length=646 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 621 TTGGAGTGAAGGGAGCTC 604 >gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L14 5-PRIME, mRNA sequence. Length=672 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 588 TTGGAGTGAAGGGAGCTC 571 >emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0001100133A04F1, mRNA sequence. Length=480 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 37 TTGGAGTGAAGGGAGCTC 20 >emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0001100075C07F1, mRNA sequence. Length=480 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGAGTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 50 TTGGAGTGAAGGGAGCTC 33 Query= sly-miR171d MIMAT0007925 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TTGAGCCGCGCCAATATC 18 |||||||||||||||||| Sbjct 256 TTGAGCCGCGCCAATATC 239 Query= sly-miR397 MIMAT0007928 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Horde... 35.6 0.016 gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22... 35.6 0.016 gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatmen... 35.6 0.016 gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp ... 35.6 0.016 ALIGNMENTS >gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB02L08, mRNA sequence. Length=455 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 176 TTGAGTGCAGCGTTGATGA 194 >gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDNA clone HT11F23 5-PRIME, mRNA sequence. Length=589 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 454 TTGAGTGCAGCGTTGATGA 436 >gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 5-PRIME, mRNA sequence. Length=273 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 58 TTGAGTGCAGCGTTGATGA 40 >gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 3-PRIME, mRNA sequence. Length=274 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 217 TTGAGTGCAGCGTTGATGA 235 >gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02L08 5-PRIME, mRNA sequence. Length=385 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATGA 295 >gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02E14 5-PRIME, mRNA sequence. Length=389 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATGA 295 >gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDNA clone HX02N11 3-PRIME, mRNA sequence. Length=442 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 199 TTGAGTGCAGCGTTGATGA 217 >gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22 5-PRIME, mRNA sequence. Length=468 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 305 TTGAGTGCAGCGTTGATGA 287 >gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_O24 5', mRNA sequence. Length=239 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 87 TTGAGTGCAGCGTTGATGA 69 >gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0008M01f, mRNA sequence. Length=462 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGAGTGCAGCGTTGATGA 20 ||||||||||||||||||| Sbjct 265 TTGAGTGCAGCGTTGATGA 247 Query= vvi-miR159a MIMAT0005648 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 ALIGNMENTS >gb|CA006699.1| HU05H10r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H10 5-PRIME, mRNA sequence. Length=646 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTTGGAGTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 622 CTTGGAGTGAAGGGAGCTC 604 >gb|BQ466150.1| HT01L14T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L14 5-PRIME, mRNA sequence. Length=672 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTTGGAGTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 589 CTTGGAGTGAAGGGAGCTC 571 >emb|AJ480356.1| AJ480356 S00011 Hordeum vulgare cDNA clone S0001100133A04F1, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTTGGAGTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 38 CTTGGAGTGAAGGGAGCTC 20 >emb|AJ480355.1| AJ480355 S00011 Hordeum vulgare cDNA clone S0001100075C07F1, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTTGGAGTGAAGGGAGCTC 19 ||||||||||||||||||| Sbjct 51 CTTGGAGTGAAGGGAGCTC 33 Query= vvi-miR166d MIMAT0005665 Length=22 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 39.2 0.001 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 39.2 0.001 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCC 21 ||||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCCC 158 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCC 21 ||||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCCC 156 Query= vvi-miR166b MIMAT0005663 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 35.6 0.016 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCC 156 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCC 154 Query= vvi-miR166e MIMAT0005666 Length=22 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 41.0 4e-04 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 39.2 0.001 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCCC 22 |||||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCCCC 159 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCCC 21 ||||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCCC 156 Query= vvi-miR171a MIMAT0005691 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= vvi-miR171h MIMAT0005697 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGTTGAGCCGCGCCAATATC 21 || |||||||||||||||||| Sbjct 259 TGATTGAGCCGCGCCAATATC 239 Query= vvi-miR845b MIMAT0006580 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ470108.1| HX01M19T HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 ALIGNMENTS >gb|BQ470108.1| HX01M19T HX Hordeum vulgare subsp. vulgare cDNA clone HX01M19 5-PRIME, mRNA sequence. Length=614 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TAGCTCTGATACCAATTGA 19 ||||||||||||||||||| Sbjct 122 TAGCTCTGATACCAATTGA 140 Query= vvi-miR171b MIMAT0005692 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGATTGAGCCGCGTCAATATC 21 ||||||||||||| ||||||| Sbjct 259 TGATTGAGCCGCGCCAATATC 239 Query= vvi-miR171f MIMAT0005696 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TTGAGCCGCGCCAATATC 18 |||||||||||||||||| Sbjct 256 TTGAGCCGCGCCAATATC 239 Query= vvi-miR399g MIMAT0005731 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 37.4 0.004 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCCCC 20 |||||||||||||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCCC 332 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 GCCAAAGGAGATTTGCCC 19 |||||||||||||||||| Sbjct 241 GCCAAAGGAGATTTGCCC 224 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAGATTTGCC 18 |||||||||||||||||| Sbjct 432 TGCCAAAGGAGATTTGCC 415 Query= vvi-miR156h MIMAT0006544 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|GH228608.1| HVSMEn0021E17f2 Hordeum vulgare rachis cDNA li... 37.4 0.004 gb|BQ665502.1| HX03O09u HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 dbj|BJ485673.1| BJ485673 K. Sato unpublished cDNA library, st... 37.4 0.004 dbj|AV910992.1| AV910992 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV909109.1| AV909109 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis s... 35.6 0.016 gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, st... 35.6 0.016 gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root E... 35.6 0.016 gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis sp... 35.6 0.016 ALIGNMENTS >gb|GH228608.1| HVSMEn0021E17f2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0047F14r, mRNA sequence. Length=625 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCAT 20 |||||||||||||||||||| Sbjct 249 TGACAGAAGAGAGAGAGCAT 230 >gb|BQ665502.1| HX03O09u HX Hordeum vulgare subsp. vulgare cDNA clone HX03O09 3-PRIME, mRNA sequence. Length=556 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCAT 20 |||||||||||||||||||| Sbjct 535 TGACAGAAGAGAGAGAGCAT 554 >dbj|BJ485673.1| BJ485673 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah58a16 3', mRNA sequence. Length=638 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCAT 20 |||||||||||||||||||| Sbjct 480 TGACAGAAGAGAGAGAGCAT 499 >dbj|AV910992.1| AV910992 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak11k01 3', mRNA sequence. Length=672 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCAT 20 |||||||||||||||||||| Sbjct 456 TGACAGAAGAGAGAGAGCAT 475 >dbj|AV909109.1| AV909109 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak11k01 5', mRNA sequence. Length=599 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCAT 20 |||||||||||||||||||| Sbjct 240 TGACAGAAGAGAGAGAGCAT 221 >gb|GH218557.1| HVSMEg0012M18f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024F02r, mRNA sequence. Length=544 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 394 TGACAGAAGAGAGAGAGCA 376 >gb|FD528446.1| RUS97G03w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50G12, mRNA sequence. Length=699 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 434 TGACAGAAGAGAGAGAGCA 452 >gb|FD526024.1| RUS83E02w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02, mRNA sequence. Length=700 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 327 TGACAGAAGAGAGAGAGCA 345 >gb|FD527301.1| RUS87A08w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41A18, mRNA sequence. Length=614 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 448 TGACAGAAGAGAGAGAGCA 466 >gb|EX597081.1| HDP15L02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=599 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 187 TGACAGAAGAGAGAGAGCA 169 >gb|EX597080.1| HDP15L02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15L02, mRNA sequence. Length=682 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 494 TGACAGAAGAGAGAGAGCA 512 >gb|EX598089.1| HDP11D21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11D21, mRNA sequence. Length=552 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 260 TGACAGAAGAGAGAGAGCA 242 >gb|CA032492.1| HX13D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX13D15 5-PRIME, mRNA sequence. Length=647 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 542 TGACAGAAGAGAGAGAGCA 524 >gb|CA020690.1| HZ37D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37D02 5-PRIME, mRNA sequence. Length=515 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 458 TGACAGAAGAGAGAGAGCA 440 >dbj|BJ478354.1| BJ478354 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah43j04 5', mRNA sequence. Length=418 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 344 TGACAGAAGAGAGAGAGCA 326 >gb|BF258419.2| HVSMEf0015K19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0015K19f, mRNA sequence. Length=902 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 203 TGACAGAAGAGAGAGAGCA 185 >gb|BE060620.2| HVSMEg0012M18f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012M18f, mRNA sequence. Length=722 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGACAGAAGAGAGAGAGCA 19 ||||||||||||||||||| Sbjct 398 TGACAGAAGAGAGAGAGCA 380 Query= vvi-miR169v MIMAT0006552 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BJ482409.1| BJ482409 K. Sato unpublished cDNA library, st... 35.6 0.016 ALIGNMENTS >dbj|BJ482409.1| BJ482409 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah35c05 3', mRNA sequence. Length=605 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 AAGCCAAGGATGAATTGCC 19 ||||||||||||||||||| Sbjct 258 AAGCCAAGGATGAATTGCC 276 Query= vvi-miR166a MIMAT0005662 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 35.6 0.016 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCC 156 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCC 19 ||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCC 154 Query= vvi-miR171i MIMAT0005698 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= osa-miR1439 MIMAT0005993 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH215029.1| HVSMEf0008P19f2 Hordeum vulgare seedling root ... 35.6 0.016 gb|BU984969.1| HF05L07r HF Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ473266.1| BJ473266 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ472225.1| BJ472225 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ471375.1| BJ471375 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ470543.1| BJ470543 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|BF256174.1| HVSMEf0008P19f Hordeum vulgare seedling root E... 35.6 0.016 dbj|BY863662.1| BY863662 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY874243.1| BY874243 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|CD664034.1| UCRHV18_07ca08_b1 Drought-stressed Dicktoo bar... 33.7 0.055 gb|BQ658389.1| HB09F16w BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ658360.1| HB09H17w BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ486131.1| BJ486131 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV836203.1| AV836203 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >gb|GH215029.1| HVSMEf0008P19f2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HVcDNA0007)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0017J08r, mRNA sequence. Length=536 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 396 TTTTGGAACGGAGTGAGTA 378 >gb|BU984969.1| HF05L07r HF Hordeum vulgare subsp. vulgare cDNA clone HF05L07 5-PRIME, mRNA sequence. Length=508 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 37 TTTTGGAACGGAGTGAGTA 55 >dbj|BJ473266.1| BJ473266 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal41g22 5', mRNA sequence. Length=579 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 573 TTTTGGAACGGAGTGAGTA 555 >dbj|BJ472225.1| BJ472225 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal32o09 5', mRNA sequence. Length=622 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 616 TTTTGGAACGGAGTGAGTA 598 >dbj|BJ471375.1| BJ471375 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal18b03 5', mRNA sequence. Length=620 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 614 TTTTGGAACGGAGTGAGTA 596 >dbj|BJ470543.1| BJ470543 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal25a18 5', mRNA sequence. Length=591 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 585 TTTTGGAACGGAGTGAGTA 567 >gb|BF256174.1| HVSMEf0008P19f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0008P19f, mRNA sequence. Length=887 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTA 19 ||||||||||||||||||| Sbjct 398 TTTTGGAACGGAGTGAGTA 380 >dbj|BY863662.1| BY863662 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63e04 3', mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTTGGAACGGAGTGAGTATT 21 ||||||||||||| ||||||| Sbjct 25 TTTTGGAACGGAGGGAGTATT 45 >dbj|BY874243.1| BY874243 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl01f09 3', mRNA sequence. Length=415 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTTGGAACGGAGTGAGTATT 21 |||||| |||||||||||||| Sbjct 123 TTTTGGGACGGAGTGAGTATT 143 >gb|CD664034.1| UCRHV18_07ca08_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_07ca08, mRNA sequence. Length=760 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTATT 21 ||||||||||||| ||||||| Sbjct 503 TTTTGGAACGGAGAGAGTATT 483 >gb|BQ658389.1| HB09F16w BC Hordeum vulgare subsp. vulgare cDNA clone HB09F16 3-PRIME, mRNA sequence. Length=541 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTTGGAACGGAGTGAGTATT 21 |||||| |||||||||||||| Sbjct 126 TTTTGGGACGGAGTGAGTATT 146 >gb|BQ658360.1| HB09H17w BC Hordeum vulgare subsp. vulgare cDNA clone HB09H17 3-PRIME, mRNA sequence. Length=567 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTTGGAACGGAGTGAGTATT 21 |||||| |||||||||||||| Sbjct 126 TTTTGGGACGGAGTGAGTATT 146 >dbj|BJ486131.1| BJ486131 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah60h10 3', mRNA sequence. Length=687 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTATT 21 ||| ||||||||||||||||| Sbjct 121 TTTAGGAACGGAGTGAGTATT 101 >dbj|AV836203.1| AV836203 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah39l24, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTTTGGAACGGAGTGAGTATT 21 ||| ||||||||||||||||| Sbjct 39 TTTAGGAACGGAGTGAGTATT 19 Query= osa-miR819c MIMAT0004070 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|BF254890.3| HVSMEf0005F09f Hordeum vulgare seedling root E... 41.0 4e-04 ALIGNMENTS >gb|BF254890.3| HVSMEf0005F09f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0005F09f, mRNA sequence. Length=876 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TCAGGTTATAAGACTTTCTAGC 22 |||||||||||||||||||||| Sbjct 434 TCAGGTTATAAGACTTTCTAGC 455 Query= osa-miR159c MIMAT0001024 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= osa-miR444c.2 MIMAT0005970 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05... 33.7 0.055 ALIGNMENTS >gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05 3-PRIME, mRNA sequence. Length=677 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGTCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 491 TGCAGTTGCTGTCTCAAGCTT 471 Query= osa-miR1871 MIMAT0007824 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|EX575651.1| HDP14H10T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX594871.1| HDP28L06w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX594870.1| HDP28L06T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 ALIGNMENTS >gb|EX575651.1| HDP14H10T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14H10, mRNA sequence. Length=695 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TGGCTCTGATATCATGTTG 20 ||||||||||||||||||| Sbjct 476 TGGCTCTGATATCATGTTG 458 >gb|EX594871.1| HDP28L06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28L06, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TGGCTCTGATATCATGTT 19 |||||||||||||||||| Sbjct 280 TGGCTCTGATATCATGTT 297 >gb|EX594870.1| HDP28L06T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28L06, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TGGCTCTGATATCATGTT 19 |||||||||||||||||| Sbjct 477 TGGCTCTGATATCATGTT 460 Query= osa-miR159d MIMAT0001025 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= osa-miR2091-5p MIMAT0010046 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BU999635.1| HI15C20r HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BI952042.1| HVSMEm0004F02f Hordeum vulgare green seedling ... 33.7 0.055 ALIGNMENTS >gb|BU999635.1| HI15C20r HI Hordeum vulgare subsp. vulgare cDNA clone HI15C20 5-PRIME, mRNA sequence. Length=583 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 CAACCGAGCCGAGGAGGA 19 |||||||||||||||||| Sbjct 271 CAACCGAGCCGAGGAGGA 254 >gb|BI952042.1| HVSMEm0004F02f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0004F02f, mRNA sequence. Length=937 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 ACCGAGCCGAGGAGGAGG 21 |||||||||||||||||| Sbjct 90 ACCGAGCCGAGGAGGAGG 107 Query= osa-miR159a.1 MIMAT0001022 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 39.2 0.001 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 39.2 0.001 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 39.2 0.001 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCTG 21 ||||||||||||||||||||| Sbjct 22 TTTGGATTGAAGGGAGCTCTG 42 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TTTGGATTGAAGGGAGCTCTG 21 ||||||||||||||||||||| Sbjct 222 TTTGGATTGAAGGGAGCTCTG 202 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAGGGAGCTCTG 21 ||||||||||||||||||||| Sbjct 376 TTTGGATTGAAGGGAGCTCTG 396 Query= osa-miR2102-5p MIMAT0010068 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BF621506.1| HVSMEa0011D14f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|BF621506.1| HVSMEa0011D14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0011D14f, mRNA sequence. Length=882 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 GGCAAGCCGCCGCCGCCA 19 |||||||||||||||||| Sbjct 17 GGCAAGCCGCCGCCGCCA 34 Query= osa-miR818b MIMAT0004064 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|EX600769.1| HDP42H12T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CB863041.1| HH01K18u HH Hordeum vulgare cDNA clone HH01K18... 35.6 0.016 gb|CB862673.1| HH03I11u HH Hordeum vulgare cDNA clone HH03I11... 35.6 0.016 dbj|AV834592.1| AV834592 K. Sato unpublished cDNA library: Ho... 35.6 0.016 dbj|BJ482549.1| BJ482549 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV832941.1| AV832941 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >gb|EX600769.1| HDP42H12T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP42H12, mRNA sequence. Length=544 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 4 CCCTTATATTATGGGACGG 22 ||||||||||||||||||| Sbjct 54 CCCTTATATTATGGGACGG 36 >gb|CB863041.1| HH01K18u HH Hordeum vulgare cDNA clone HH01K18 3-PRIME, mRNA sequence. Length=676 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 4 CCCTTATATTATGGGACGG 22 ||||||||||||||||||| Sbjct 47 CCCTTATATTATGGGACGG 29 >gb|CB862673.1| HH03I11u HH Hordeum vulgare cDNA clone HH03I11 3-PRIME, mRNA sequence. Length=596 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 4 CCCTTATATTATGGGACGG 22 ||||||||||||||||||| Sbjct 34 CCCTTATATTATGGGACGG 16 >dbj|AV834592.1| AV834592 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare shoots germination Hordeum vulgare subsp. vulgare cDNA clone bags3l23, mRNA sequence. Length=699 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 4 CCCTTATATTATGGGACGG 22 ||||||||||||||||||| Sbjct 50 CCCTTATATTATGGGACGG 32 >dbj|BJ482549.1| BJ482549 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah40a22 3', mRNA sequence. Length=580 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 CCTTATATTATGGGACGG 22 |||||||||||||||||| Sbjct 533 CCTTATATTATGGGACGG 550 >dbj|AV832941.1| AV832941 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare top three leaves adult, heading stage Hordeum vulgare subsp. vulgare cDNA clone baal3o01, mRNA sequence. Length=713 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 CCTTATATTATGGGACGG 22 |||||||||||||||||| Sbjct 599 CCTTATATTATGGGACGG 616 Query= osa-miR1848 MIMAT0007768 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BF622978.3| HVSMEa0012G14f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|BF622978.3| HVSMEa0012G14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0012G14f, mRNA sequence. Length=492 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 TCGCCGGCGCGCGCGTGC 20 |||||||||||||||||| Sbjct 89 TCGCCGGCGCGCGCGTGC 106 Query= osa-miR442 MIMAT0001605 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|EX580398.1| HDP26J05T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 ALIGNMENTS >gb|EX580398.1| HDP26J05T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26J05, mRNA sequence. Length=584 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TGACGTGTAAATTGCGAGACGAA 23 |||| |||||||||||||| ||| Sbjct 54 TGACATGTAAATTGCGAGAGGAA 76 Query= osa-miR2094-5p MIMAT0010052 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BG365648.2| HVSMEi0003J11f Hordeum vulgare 20 DAP spike ES... 33.7 0.055 ALIGNMENTS >gb|BG365648.2| HVSMEi0003J11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0003J11f, mRNA sequence. Length=869 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 CTGCTAGGCTCCTGGGTG 21 |||||||||||||||||| Sbjct 613 CTGCTAGGCTCCTGGGTG 630 Query= osa-miR2102-3p MIMAT0010069 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|BE455168.3| HVSMEh0096H06f Hordeum vulgare 5-45 DAP spike ... 35.6 0.016 ALIGNMENTS >gb|BE455168.3| HVSMEh0096H06f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0096H06f, mRNA sequence. Length=750 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 TGGTGCCGGTTCCGGTGGC 21 ||||||||||||||||||| Sbjct 448 TGGTGCCGGTTCCGGTGGC 466 Query= osa-miR444e MIMAT0005975 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA li... 39.2 0.001 gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, ... 39.2 0.001 gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, ... 39.2 0.001 gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no tr... 39.2 0.001 emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum ... 39.2 0.001 gb|CX630154.1| GW001J21r GW Hordeum vulgare cDNA clone GW001J... 37.4 0.004 gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05... 33.7 0.055 ALIGNMENTS >gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0048D04f, mRNA sequence. Length=613 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 366 TGCAGTTGCTGCCTCAAGCTT 386 >gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDNA clone HL02K16 3-PRIME, mRNA sequence. Length=634 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 207 TGCAGTTGCTGCCTCAAGCTT 227 >gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDNA clone HV12I24 5-PRIME, mRNA sequence. Length=555 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 199 TGCAGTTGCTGCCTCAAGCTT 219 >gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDNA clone HU09P07 5-PRIME, mRNA sequence. Length=638 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 215 TGCAGTTGCTGCCTCAAGCTT 235 >gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H03 5-PRIME, mRNA sequence. Length=542 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 446 TGCAGTTGCTGCCTCAAGCTT 466 >gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M24 5', mRNA sequence. Length=679 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 224 TGCAGTTGCTGCCTCAAGCTT 244 >gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M04 5', mRNA sequence. Length=675 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 224 TGCAGTTGCTGCCTCAAGCTT 244 >gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ002_L15 5', mRNA sequence. Length=357 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 147 TGCAGTTGCTGCCTCAAGCTT 167 >emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW01I03 5', mRNA sequence. Length=565 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||||||||||||| Sbjct 215 TGCAGTTGCTGCCTCAAGCTT 235 >gb|CX630154.1| GW001J21r GW Hordeum vulgare cDNA clone GW001J21 5-PRIME, mRNA sequence. Length=430 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 GCAGTTGCTGCCTCAAGCTT 21 |||||||||||||||||||| Sbjct 152 GCAGTTGCTGCCTCAAGCTT 171 >gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05 3-PRIME, mRNA sequence. Length=677 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGCTGCCTCAAGCTT 21 ||||||||||| ||||||||| Sbjct 491 TGCAGTTGCTGTCTCAAGCTT 471 Query= osa-miR444d.1 MIMAT0005974 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA li... 39.2 0.001 gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, ... 39.2 0.001 gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, ... 39.2 0.001 gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no tr... 39.2 0.001 emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum ... 39.2 0.001 gb|CX630154.1| GW001J21r GW Hordeum vulgare cDNA clone GW001J... 33.7 0.055 ALIGNMENTS >gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0048D04f, mRNA sequence. Length=613 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 371 TTGCTGCCTCAAGCTTGCTGC 391 >gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDNA clone HL02K16 3-PRIME, mRNA sequence. Length=634 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 212 TTGCTGCCTCAAGCTTGCTGC 232 >gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDNA clone HV12I24 5-PRIME, mRNA sequence. Length=555 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 204 TTGCTGCCTCAAGCTTGCTGC 224 >gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDNA clone HU09P07 5-PRIME, mRNA sequence. Length=638 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 220 TTGCTGCCTCAAGCTTGCTGC 240 >gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H03 5-PRIME, mRNA sequence. Length=542 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 451 TTGCTGCCTCAAGCTTGCTGC 471 >gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M24 5', mRNA sequence. Length=679 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 229 TTGCTGCCTCAAGCTTGCTGC 249 >gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M04 5', mRNA sequence. Length=675 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 229 TTGCTGCCTCAAGCTTGCTGC 249 >gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ002_L15 5', mRNA sequence. Length=357 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 152 TTGCTGCCTCAAGCTTGCTGC 172 >emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW01I03 5', mRNA sequence. Length=565 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGCTGC 21 ||||||||||||||||||||| Sbjct 220 TTGCTGCCTCAAGCTTGCTGC 240 >gb|CX630154.1| GW001J21r GW Hordeum vulgare cDNA clone GW001J21 5-PRIME, mRNA sequence. Length=430 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGCTGCCTCAAGCTTGC 18 |||||||||||||||||| Sbjct 156 TTGCTGCCTCAAGCTTGC 173 Query= osa-miR396e MIMAT0001601 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv... 39.2 0.001 gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24... 35.6 0.016 gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08... 35.6 0.016 gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST libr... 35.6 0.016 ALIGNMENTS >dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd24d08 5', mRNA sequence. Length=654 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCCACAGGCTTTCTTGAACTG 21 ||||||||||||||||||||| Sbjct 13 TCCACAGGCTTTCTTGAACTG 33 >gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP09M03, mRNA sequence. Length=681 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 140 TCCACAGGCTTTCTTGAAC 122 >gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24 5-PRIME, mRNA sequence. Length=656 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 413 TCCACAGGCTTTCTTGAAC 395 >gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08 5-PRIME, mRNA sequence. Length=465 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 118 TCCACAGGCTTTCTTGAAC 100 >gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDNA clone HX09M20 5-PRIME, mRNA sequence. Length=633 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 534 TCCACAGGCTTTCTTGAAC 516 >gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDNA clone HX05A15 5-PRIME, mRNA sequence. Length=640 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 556 TCCACAGGCTTTCTTGAAC 538 >gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O21 5-PRIME, mRNA sequence. Length=271 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 159 TCCACAGGCTTTCTTGAAC 141 >gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDNA clone HX04P12 3-PRIME, mRNA sequence. Length=476 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 280 TCCACAGGCTTTCTTGAAC 298 >gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDNA clone HI05C18 3-PRIME, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 280 TCCACAGGCTTTCTTGAAC 298 >gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDNA clone HX03F05 5-PRIME, mRNA sequence. Length=658 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 309 TCCACAGGCTTTCTTGAAC 291 >gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0017E21f, mRNA sequence. Length=584 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 85 TCCACAGGCTTTCTTGAAC 67 >gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016O19f, mRNA sequence. Length=641 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TCCACAGGCTTTCTTGAAC 19 ||||||||||||||||||| Sbjct 277 TCCACAGGCTTTCTTGAAC 259 Query= osa-miR408 MIMAT0001079 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis s... 35.6 0.016 gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stres... 35.6 0.016 gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatm... 35.6 0.016 gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulga... 35.6 0.016 gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|GH227347.1| HVSMEn0004G01f2 Hordeum vulgare rachis cDNA li... 33.7 0.055 dbj|BY860269.1| BY860269 Etiolated seedling shoot Hordeum vul... 33.7 0.055 gb|DN161029.1| GW003C05f GW Hordeum vulgare cDNA clone GW003C... 33.7 0.055 gb|DN159885.1| GPN003L24u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 gb|DN159365.1| GPN004K22u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 gb|CX627754.1| GBN006D11u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|BU995995.1| HM12A15r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BI956607.1| HVSMEn0004G01f Hordeum vulgare rachis EST libr... 33.7 0.055 emb|AL503077.1| AL503077 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 ALIGNMENTS >gb|GH218076.1| HVSMEg0009H16f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023F10r, mRNA sequence. Length=452 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 121 CTGCACTGCCTCTTCCCTG 103 >gb|CB881899.1| HM11D18w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 3-PRIME, mRNA sequence. Length=645 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 572 CTGCACTGCCTCTTCCCTG 590 >gb|BU995745.1| HM11D18r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D18 5-PRIME, mRNA sequence. Length=623 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 96 CTGCACTGCCTCTTCCCTG 78 >gb|BU995231.1| HM09J22r HM Hordeum vulgare subsp. vulgare cDNA clone HM09J22 5-PRIME, mRNA sequence. Length=653 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 126 CTGCACTGCCTCTTCCCTG 108 >gb|BU976391.1| HA03K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA03K02 5-PRIME, mRNA sequence. Length=544 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 121 CTGCACTGCCTCTTCCCTG 103 >gb|BQ768355.1| EBro08_SQ011_P12_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ011_P12 5', mRNA sequence. Length=340 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 116 CTGCACTGCCTCTTCCCTG 98 >gb|BM372993.2| EBma04_SQ002_K17_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_K17 5', mRNA sequence. Length=380 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 97 CTGCACTGCCTCTTCCCTG 79 >gb|BQ468842.1| HM02I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM02I05 5-PRIME, mRNA sequence. Length=537 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 120 CTGCACTGCCTCTTCCCTG 102 >gb|BM817241.1| HC05A10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC05A10_T3.ab1 similar to (AC087181) putative basic protein [Oryza sativa], mRNA sequence. Length=792 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 126 CTGCACTGCCTCTTCCCTG 108 >gb|BG344510.1| HVSMEg0009H16f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0009H16f, mRNA sequence. Length=814 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTG 19 ||||||||||||||||||| Sbjct 123 CTGCACTGCCTCTTCCCTG 105 >gb|GH227347.1| HVSMEn0004G01f2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0044O20r, mRNA sequence. Length=378 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 282 CTGCACTGCCTCTGCCCTGGC 262 >dbj|BY860269.1| BY860269 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet16h03 3', mRNA sequence. Length=111 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 58 CTGCACTGCCTCTGCCCTGGC 78 >gb|DN161029.1| GW003C05f GW Hordeum vulgare cDNA clone GW003C05 3-PRIME, mRNA sequence. Length=404 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 206 CTGCACTGCCTCTGCCCTGGC 186 >gb|DN159885.1| GPN003L24u GPN Hordeum vulgare cDNA clone GPN003L24 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 570 CTGCACTGCCTCTGCCCTGGC 550 >gb|DN159365.1| GPN004K22u GPN Hordeum vulgare cDNA clone GPN004K22 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 21 CTGCACTGCCTCTGCCCTGGC 1 >gb|CX627754.1| GBN006D11u GBN Hordeum vulgare cDNA clone GBN006D11 3-PRIME, mRNA sequence. Length=235 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 194 CTGCACTGCCTCTGCCCTGGC 214 >gb|BU995995.1| HM12A15r HM Hordeum vulgare subsp. vulgare cDNA clone HM12A15 5-PRIME, mRNA sequence. Length=314 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 168 CTGCACTGCCTCTGCCCTGGC 148 >gb|BI956607.1| HVSMEn0004G01f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0004G01f, mRNA sequence. Length=882 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 284 CTGCACTGCCTCTGCCCTGGC 264 >emb|AL503077.1| AL503077 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09K04 3', mRNA sequence. Length=250 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CTGCACTGCCTCTTCCCTGGC 21 ||||||||||||| ||||||| Sbjct 219 CTGCACTGCCTCTGCCCTGGC 239 Query= osa-miR159f MIMAT0001027 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 35.6 0.016 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 35.6 0.016 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTCT 20 ||||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTCT 41 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTCT 20 ||||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTCT 203 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTCT 20 ||||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTCT 395 Query= osa-miR156l MIMAT0001021 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|BG300360.1| HVSMEb0016B08f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0016B08f, mRNA sequence. Length=624 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 GACAGAAGAGAGTGAGCA 19 |||||||||||||||||| Sbjct 232 GACAGAAGAGAGTGAGCA 249 Query= osa-miR169d MIMAT0001049 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BJ482409.1| BJ482409 K. Sato unpublished cDNA library, st... 33.7 0.055 ALIGNMENTS >dbj|BJ482409.1| BJ482409 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah35c05 3', mRNA sequence. Length=605 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AGCCAAGGATGAATTGCC 19 |||||||||||||||||| Sbjct 259 AGCCAAGGATGAATTGCC 276 Query= osa-miR168b MIMAT0001046 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA030148.1| HX06D16r HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|CA029324.1| HZ64N22r HZ Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 emb|AL508237.1| AL508237 Hordeum vulgare Barke developing car... 35.6 0.016 ALIGNMENTS >gb|CA030148.1| HX06D16r HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16 5-PRIME, mRNA sequence. Length=652 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GGCTTGGTGCAGCTCGGGAA 21 |||||||||||||||||||| Sbjct 625 GGCTTGGTGCAGCTCGGGAA 606 >gb|CA029324.1| HZ64N22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64N22 5-PRIME, mRNA sequence. Length=342 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 GGCTTGGTGCAGCTCGGGAA 21 |||||||||||||||||||| Sbjct 142 GGCTTGGTGCAGCTCGGGAA 123 >emb|AL508237.1| AL508237 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY08C19 5', mRNA sequence. Length=670 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 GCTTGGTGCAGCTCGGGAA 21 ||||||||||||||||||| Sbjct 189 GCTTGGTGCAGCTCGGGAA 171 Query= osa-miR1867 MIMAT0007818 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|GH216548.1| HVSMEf0022C02f2 Hordeum vulgare seedling root ... 33.7 0.055 gb|BG300947.2| HVSMEb0019A19f Hordeum vulgare seedling shoot ... 33.7 0.055 gb|BF260484.1| HVSMEf0022C02f Hordeum vulgare seedling root E... 33.7 0.055 ALIGNMENTS >gb|GH216548.1| HVSMEf0022C02f2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HVcDNA0007)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0020F22r, mRNA sequence. Length=578 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 6 tttCTAGGACAGAGGGAG 23 |||||||||||||||||| Sbjct 26 TTTCTAGGACAGAGGGAG 43 >gb|BG300947.2| HVSMEb0019A19f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0019A19f, mRNA sequence. Length=730 Score = 33.7 bits (36), Expect = 0.055 Identities = 23/25 (92%), Gaps = 1/25 (4%) Strand=Plus/Minus Query 1 ttttttttCTAGGAC-AGAGGGAGT 24 ||||||||||||||| |||||||| Sbjct 718 TTTTTTTTCTAGGACGGGAGGGAGT 694 >gb|BF260484.1| HVSMEf0022C02f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0022C02f, mRNA sequence. Length=851 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 6 tttCTAGGACAGAGGGAG 23 |||||||||||||||||| Sbjct 26 TTTCTAGGACAGAGGGAG 43 Query= osa-miR1438 MIMAT0005989 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|BF266261.2| HV_CEa0014K01f Hordeum vulgare seedling green ... 33.7 0.055 ALIGNMENTS >gb|BF266261.2| HV_CEa0014K01f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0014K01f, mRNA sequence. Length=901 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 AGGGTAATTTTAT-CATTTTTAA 22 ||||||||||||| ||||||||| Sbjct 820 AGGGTAATTTTATACATTTTTAA 842 Query= osa-miR1862e MIMAT0007833 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|CX629545.1| GCW002L04r GCW Hordeum vulgare cDNA clone GCW0... 33.7 0.055 ALIGNMENTS >gb|CX629545.1| GCW002L04r GCW Hordeum vulgare cDNA clone GCW002L04 5-PRIME, mRNA sequence. Length=264 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CTAGATTTGTTTATTTTGGGA 21 |||||||||||| |||||||| Sbjct 33 CTAGATTTGTTTGTTTTGGGA 13 Query= osa-miR1858a MIMAT0007786 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|BQ762980.1| EBro02_SQ006_C21_R root, 3 week, hydroponic gr... 33.7 0.055 ALIGNMENTS >gb|BQ762980.1| EBro02_SQ006_C21_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ006_C21 5', mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 GAGAGGAGGACGGAGTGGGGC 21 |||||||||||||||| |||| Sbjct 109 GAGAGGAGGACGGAGTAGGGC 89 Query= osa-miR1436 MIMAT0005987 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|EX572464.1| HDP31P08T HDP Hordeum vulgare subsp. vulgare c... 39.2 0.001 gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN0... 39.2 0.001 gb|BM100733.2| EBpi01_SQ001_F03_R pistil, 1 DPA, no treatment... 39.2 0.001 dbj|BJ485923.1| BJ485923 K. Sato unpublished cDNA library, st... 39.2 0.001 dbj|BJ485913.1| BJ485913 K. Sato unpublished cDNA library, st... 39.2 0.001 gb|GH219034.1| HVSMEg0017I06r2 Hordeum vulgare pre-anthesis s... 35.6 0.016 gb|FD519329.1| RUS38G06w HB (Hordeum vulgare cv. Barke) Horde... 35.6 0.016 gb|EX573766.1| HDP26P08T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX595547.1| HDP24I01w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX595552.1| HDP24I01T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX600769.1| HDP42H12T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 dbj|BY877744.1| BY877744 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY874438.1| BY874438 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY865147.1| BY865147 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|CV064340.1| BNEL9G7 Barley EST endosperm library Hordeum v... 35.6 0.016 gb|CK569835.1| HO14J06w HO Hordeum vulgare cDNA clone HO14J06... 35.6 0.016 gb|CD663278.1| UCRHV18_04dh06_b1 Drought-stressed Dicktoo bar... 35.6 0.016 gb|CD057247.1| HO14J06S HO Hordeum vulgare cDNA clone HO14J06... 35.6 0.016 gb|CB863041.1| HH01K18u HH Hordeum vulgare cDNA clone HH01K18... 35.6 0.016 gb|CB862673.1| HH03I11u HH Hordeum vulgare cDNA clone HH03I11... 35.6 0.016 gb|CA010088.1| HT12A16u HT Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BM371881.2| EBma08_SQ004_E13_R maternal, 28 DPA, no treatm... 35.6 0.016 dbj|BJ482549.1| BJ482549 K. Sato unpublished cDNA library, st... 35.6 0.016 dbj|BJ468182.1| BJ468182 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV834592.1| AV834592 K. Sato unpublished cDNA library: Ho... 35.6 0.016 gb|AW983316.2| HVSMEg0010D05f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|GH217963.1| HVSMEg0008P07f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|GH213790.1| HVSMEc0005C05r2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|GH212963.1| HVSMEb0010J16f2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|FD521311.1| RUS26A11w HA Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX575535.1| HDP14J23w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX583817.1| HDP08M12T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX592251.1| HDP03J09w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX592250.1| HDP03J09T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX593248.1| HDP41E18T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX591321.1| HDP08A06T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX591500.1| HDP07M01T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX583713.1| HDP08O21T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX583708.1| HDP08O21w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581160.1| HDP22D19T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX586705.1| HDP33L13w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX593880.1| HDP14J23T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX580539.1| HDP26F19w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX580538.1| HDP26F19T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY864150.1| BY864150 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY863869.1| BY863869 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY870096.1| BY870096 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY874640.1| BY874640 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|DN187130.1| HO26K22w HO Hordeum vulgare cDNA clone HO26K22... 33.7 0.055 gb|DN184585.1| HO36O19w HO Hordeum vulgare cDNA clone HO36O19... 33.7 0.055 gb|DN180754.1| HO26F03S HO Hordeum vulgare cDNA clone HO26F03... 33.7 0.055 gb|CX629150.1| GCW001F14r GCW Hordeum vulgare cDNA clone GCW0... 33.7 0.055 gb|CB877969.1| HP06N24T HP Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB871794.1| HC05E13y CH Hordeum vulgare cDNA clone HC05E13... 33.7 0.055 gb|CB867028.1| HC05E13w CH Hordeum vulgare cDNA clone HC05E13... 33.7 0.055 gb|CA010562.1| HT09K16u HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU996201.1| HM12N03r HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU977032.1| HA10L15u HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU968160.1| HB06J24r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BM443538.2| EBro02_SQ005_J09_R root, 3 week, hydroponic gr... 33.7 0.055 gb|BQ662944.1| HS04O14u HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ661883.1| HP01K18w HP Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ661628.1| HM04G24u HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ657747.1| HA07C06u HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ468272.1| HP01K18T HP Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ467319.1| HS03G06r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ486097.1| BJ486097 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV834234.1| AV834234 K. Sato unpublished cDNA library: Ho... 33.7 0.055 gb|BG344337.1| HVSMEg0008P07f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BF629274.2| HVSMEb0010J16f Hordeum vulgare seedling shoot ... 33.7 0.055 emb|AL509815.1| AL509815 Hordeum vulgare Barke developing car... 33.7 0.055 emb|AL503060.1| AL503060 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 emb|AL500558.1| AL500558 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 ALIGNMENTS >gb|EX572464.1| HDP31P08T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP31P08, mRNA sequence. Length=551 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||||||||| Sbjct 98 ACATTATGGGACGGAGGGAGT 78 >gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN004K19 3-PRIME, mRNA sequence. Length=559 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||||||||| Sbjct 504 ACATTATGGGACGGAGGGAGT 484 >gb|BM100733.2| EBpi01_SQ001_F03_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulgare cDNA clone EBpi01_SQ001_F03 5', mRNA sequence. Length=517 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||||||||| Sbjct 503 ACATTATGGGACGGAGGGAGT 483 >dbj|BJ485923.1| BJ485923 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah59d23 3', mRNA sequence. Length=145 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||||||||| Sbjct 79 ACATTATGGGACGGAGGGAGT 99 >dbj|BJ485913.1| BJ485913 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah59c24 3', mRNA sequence. Length=436 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||||||||| Sbjct 79 ACATTATGGGACGGAGGGAGT 99 >gb|GH219034.1| HVSMEg0017I06r2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0025P17f, mRNA sequence. Length=596 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 218 ATTATGGGACGGAGGGAGT 236 >gb|FD519329.1| RUS38G06w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB14L14, mRNA sequence. Length=694 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 168 ATTATGGGACGGAGGGAGT 186 >gb|EX573766.1| HDP26P08T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26P08, mRNA sequence. Length=564 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 182 ATTATGGGACGGAGGGAGT 200 >gb|EX595547.1| HDP24I01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24I01, mRNA sequence. Length=594 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 544 ATTATGGGACGGAGGGAGT 562 >gb|EX595552.1| HDP24I01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24I01, mRNA sequence. Length=478 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 42 ATTATGGGACGGAGGGAGT 24 >gb|EX600769.1| HDP42H12T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP42H12, mRNA sequence. Length=544 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 47 ATTATGGGACGGAGGGAGT 29 >dbj|BY877744.1| BY877744 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl55c01 3', mRNA sequence. Length=423 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 207 ATTATGGGACGGAGGGAGT 225 >dbj|BY874438.1| BY874438 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl03h05 3', mRNA sequence. Length=432 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 207 ATTATGGGACGGAGGGAGT 225 >dbj|BY865147.1| BY865147 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet91c08 3', mRNA sequence. Length=317 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 103 ATTATGGGACGGAGGGAGT 85 >gb|CV064340.1| BNEL9G7 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL9G7 5' similar to Hordeum vulgare contig 211252, complete sequence, mRNA sequence. Length=544 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 315 ATTATGGGACGGAGGGAGT 297 >gb|CK569835.1| HO14J06w HO Hordeum vulgare cDNA clone HO14J06 3-PRIME, mRNA sequence. Length=624 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 134 ATTATGGGACGGAGGGAGT 116 >gb|CD663278.1| UCRHV18_04dh06_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_04dh06, mRNA sequence. Length=533 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 253 ATTATGGGACGGAGGGAGT 271 >gb|CD057247.1| HO14J06S HO Hordeum vulgare cDNA clone HO14J06 5-PRIME, mRNA sequence. Length=589 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 490 ATTATGGGACGGAGGGAGT 508 >gb|CB863041.1| HH01K18u HH Hordeum vulgare cDNA clone HH01K18 3-PRIME, mRNA sequence. Length=676 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 40 ATTATGGGACGGAGGGAGT 22 >gb|CB862673.1| HH03I11u HH Hordeum vulgare cDNA clone HH03I11 3-PRIME, mRNA sequence. Length=596 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 27 ATTATGGGACGGAGGGAGT 9 >gb|CA010088.1| HT12A16u HT Hordeum vulgare subsp. vulgare cDNA clone HT12A16 3-PRIME, mRNA sequence. Length=536 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 63 ATTATGGGACGGAGGGAGT 45 >gb|BM371881.2| EBma08_SQ004_E13_R maternal, 28 DPA, no treatment, cv Optic, EBma08 Hordeum vulgare subsp. vulgare cDNA clone EBma08_SQ004_E13 5', mRNA sequence. Length=470 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 252 ATTATGGGACGGAGGGAGT 234 >dbj|BJ482549.1| BJ482549 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah40a22 3', mRNA sequence. Length=580 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 506 ATTATGGGACGGAGGGAGT 488 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 539 ATTATGGGACGGAGGGAGT 557 >dbj|BJ468182.1| BJ468182 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags37i06 3', mRNA sequence. Length=751 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 201 ATTATGGGACGGAGGGAGT 219 >dbj|AV834592.1| AV834592 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare shoots germination Hordeum vulgare subsp. vulgare cDNA clone bags3l23, mRNA sequence. Length=699 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 43 ATTATGGGACGGAGGGAGT 25 >gb|AW983316.2| HVSMEg0010D05f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0010D05f, mRNA sequence. Length=845 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAGT 21 ||||||||||||||||||| Sbjct 538 ATTATGGGACGGAGGGAGT 556 >gb|GH217963.1| HVSMEg0008P07f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023P15r, mRNA sequence. Length=636 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 488 ACATTATGCGACGGAGGGAGT 468 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||||| ||||| Sbjct 531 ACATTATGGGACGGAAGGAGT 551 >gb|GH213790.1| HVSMEc0005C05r2 Hordeum vulgare seedling shoot (etiolated unstressed) cDNA library HVSMEc (HVcDNA0003)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0014K18f, mRNA sequence. Length=549 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 170 TTATGGGACGGAGGGAGT 153 >gb|GH212963.1| HVSMEb0010J16f2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0012B09r, mRNA sequence. Length=304 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 290 ACATTATGGGACAGAGGGAGT 270 >gb|FD521311.1| RUS26A11w HA Hordeum vulgare subsp. vulgare cDNA clone HA31F20, mRNA sequence. Length=693 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 132 TTATGGGACGGAGGGAGT 115 >gb|EX575535.1| HDP14J23w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14J23, mRNA sequence. Length=564 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 287 ACATTATGTGACGGAGGGAGT 267 >gb|EX583817.1| HDP08M12T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08M12, mRNA sequence. Length=623 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 86 ACATTATGGGACAGAGGGAGT 106 >gb|EX592251.1| HDP03J09w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03J09, mRNA sequence. Length=451 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 415 ACATTATGGGACAGAGGGAGT 395 >gb|EX592250.1| HDP03J09T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03J09, mRNA sequence. Length=416 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 34 ACATTATGGGACAGAGGGAGT 54 >gb|EX593248.1| HDP41E18T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP41E18, mRNA sequence. Length=688 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||||||||||| ||||||| Sbjct 172 ACATTATGGGACGTAGGGAGT 152 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 242 ACATTATGGGACAGAGGGAGT 262 >gb|EX591321.1| HDP08A06T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08A06, mRNA sequence. Length=549 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 27 ACATTATGGGACAGAGGGAGT 47 >gb|EX591500.1| HDP07M01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07M01, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||| ||||||||||||||| Sbjct 182 ACATTTTGGGACGGAGGGAGT 202 >gb|EX583713.1| HDP08O21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08O21, mRNA sequence. Length=530 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 255 ACATTATGTGACGGAGGGAGT 275 >gb|EX583708.1| HDP08O21w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08O21, mRNA sequence. Length=534 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 276 ACATTATGTGACGGAGGGAGT 256 >gb|EX581160.1| HDP22D19T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22D19, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 ATTATGGGACGGAGGGAG 20 |||||||||||||||||| Sbjct 400 ATTATGGGACGGAGGGAG 417 >gb|EX586705.1| HDP33L13w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33L13, mRNA sequence. Length=638 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 238 ACATTATGAGACGGAGGGAGT 258 >gb|EX593880.1| HDP14J23T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14J23, mRNA sequence. Length=530 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 273 ACATTATGTGACGGAGGGAGT 293 >gb|EX580539.1| HDP26F19w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26F19, mRNA sequence. Length=557 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 238 ACATTATGAGACGGAGGGAGT 258 >gb|EX580538.1| HDP26F19T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26F19, mRNA sequence. Length=553 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 316 ACATTATGAGACGGAGGGAGT 296 >dbj|BY864150.1| BY864150 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet69e09 3', mRNA sequence. Length=438 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 112 TTATGGGACGGAGGGAGT 95 >dbj|BY863869.1| BY863869 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet65h09 3', mRNA sequence. Length=451 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 133 TTATGGGACGGAGGGAGT 116 >dbj|BY870096.1| BY870096 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast03f01 3', mRNA sequence. Length=477 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 191 TTATGGGACGGAGGGAGT 174 >dbj|BY874640.1| BY874640 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl06b05 3', mRNA sequence. Length=271 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||| ||||||||||||||| Sbjct 203 ACATTTTGGGACGGAGGGAGT 223 >gb|DN187130.1| HO26K22w HO Hordeum vulgare cDNA clone HO26K22 3-PRIME, mRNA sequence. Length=481 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 227 TTATGGGACGGAGGGAGT 210 >gb|DN184585.1| HO36O19w HO Hordeum vulgare cDNA clone HO36O19 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 119 TTATGGGACGGAGGGAGT 102 >gb|DN180754.1| HO26F03S HO Hordeum vulgare cDNA clone HO26F03 5-PRIME, mRNA sequence. Length=481 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 255 TTATGGGACGGAGGGAGT 272 >gb|CX629150.1| GCW001F14r GCW Hordeum vulgare cDNA clone GCW001F14 5-PRIME, mRNA sequence. Length=405 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 214 TTATGGGACGGAGGGAGT 231 >gb|CB877969.1| HP06N24T HP Hordeum vulgare subsp. vulgare cDNA clone HP06N24 5-PRIME, mRNA sequence. Length=338 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 73 TTATGGGACGGAGGGAGT 90 >gb|CB871794.1| HC05E13y CH Hordeum vulgare cDNA clone HC05E13 3-PRIME, mRNA sequence. Length=315 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||| ||||||||||||||| Sbjct 212 ACATTTTGGGACGGAGGGAGT 232 >gb|CB867028.1| HC05E13w CH Hordeum vulgare cDNA clone HC05E13 5-PRIME, mRNA sequence. Length=325 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 ||||| ||||||||||||||| Sbjct 117 ACATTTTGGGACGGAGGGAGT 97 >gb|CA010562.1| HT09K16u HT Hordeum vulgare subsp. vulgare cDNA clone HT09K16 3-PRIME, mRNA sequence. Length=587 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 230 TTATGGGACGGAGGGAGT 213 >gb|BU996201.1| HM12N03r HM Hordeum vulgare subsp. vulgare cDNA clone HM12N03 5-PRIME, mRNA sequence. Length=604 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 492 TTATGGGACGGAGGGAGT 509 >gb|BU977032.1| HA10L15u HA Hordeum vulgare subsp. vulgare cDNA clone HA10L15 3-PRIME, mRNA sequence. Length=613 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 227 TTATGGGACGGAGGGAGT 210 >gb|BU968160.1| HB06J24r BC Hordeum vulgare subsp. vulgare cDNA clone HB06J24 5-PRIME, mRNA sequence. Length=458 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 274 TTATGGGACGGAGGGAGT 291 >gb|BM443538.2| EBro02_SQ005_J09_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ005_J09 5', mRNA sequence. Length=529 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 484 ACATTATGTGACGGAGGGAGT 464 >gb|BQ662944.1| HS04O14u HS Hordeum vulgare subsp. vulgare cDNA clone HS04O14 3-PRIME, mRNA sequence. Length=543 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 147 TTATGGGACGGAGGGAGT 130 >gb|BQ661883.1| HP01K18w HP Hordeum vulgare subsp. vulgare cDNA clone HP01K18 3-PRIME, mRNA sequence. Length=291 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 254 TTATGGGACGGAGGGAGT 237 >gb|BQ661628.1| HM04G24u HM Hordeum vulgare subsp. vulgare cDNA clone HM04G24 3-PRIME, mRNA sequence. Length=576 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 193 TTATGGGACGGAGGGAGT 176 >gb|BQ657747.1| HA07C06u HA Hordeum vulgare subsp. vulgare cDNA clone HA07C06 3-PRIME, mRNA sequence. Length=613 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 227 TTATGGGACGGAGGGAGT 210 >gb|BQ468272.1| HP01K18T HP Hordeum vulgare subsp. vulgare cDNA clone HP01K18 5-PRIME, mRNA sequence. Length=318 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 69 TTATGGGACGGAGGGAGT 86 >gb|BQ467319.1| HS03G06r HS Hordeum vulgare subsp. vulgare cDNA clone HS03G06 5-PRIME, mRNA sequence. Length=409 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 227 TTATGGGACGGAGGGAGT 210 >dbj|BJ486097.1| BJ486097 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah60e11 3', mRNA sequence. Length=743 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 216 TTATGGGACGGAGGGAGT 199 >dbj|AV834234.1| AV834234 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare shoots germination Hordeum vulgare subsp. vulgare cDNA clone bags7m23, mRNA sequence. Length=591 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 113 TTATGGGACGGAGGGAGT 96 >gb|BG344337.1| HVSMEg0008P07f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0008P07f, mRNA sequence. Length=803 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||| |||||||||||| Sbjct 488 ACATTATGCGACGGAGGGAGT 468 >gb|BF629274.2| HVSMEb0010J16f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0010J16f, mRNA sequence. Length=750 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ACATTATGGGACGGAGGGAGT 21 |||||||||||| |||||||| Sbjct 290 ACATTATGGGACAGAGGGAGT 270 >emb|AL509815.1| AL509815 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY02B16 3', mRNA sequence. Length=548 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 192 TTATGGGACGGAGGGAGT 175 >emb|AL503060.1| AL503060 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09J09 3', mRNA sequence. Length=484 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 187 TTATGGGACGGAGGGAGT 170 >emb|AL500558.1| AL500558 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW01A22 3', mRNA sequence. Length=532 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTATGGGACGGAGGGAGT 21 |||||||||||||||||| Sbjct 166 TTATGGGACGGAGGGAGT 149 Query= osa-miR160e MIMAT0001030 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot... 37.4 0.004 gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot ... 37.4 0.004 gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot ... 35.6 0.016 ALIGNMENTS >gb|GH209508.1| HVSMEa0002K04f2 Hordeum vulgare seedling shoot (cold stress) cDNA library HVSMEa (HVcDNA0001)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0006E20r, mRNA sequence. Length=618 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 264 TGCCTGGCTCCCTGTATGCC 245 >gb|CA002787.1| HS08I15r HS Hordeum vulgare subsp. vulgare cDNA clone HS08I15 5-PRIME, mRNA sequence. Length=355 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 324 TGCCTGGCTCCCTGTATGCC 343 >gb|BU986263.1| HF11D06r HF Hordeum vulgare subsp. vulgare cDNA clone HF11D06 5-PRIME, mRNA sequence. Length=592 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 208 TGCCTGGCTCCCTGTATGCC 189 >dbj|BJ472971.1| BJ472971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal40b20 5', mRNA sequence. Length=596 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 388 TGCCTGGCTCCCTGTATGCC 369 >dbj|BJ471957.1| BJ471957 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28l21 5', mRNA sequence. Length=479 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ471544.1| BJ471544 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal19d14 5', mRNA sequence. Length=481 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ469735.1| BJ469735 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal37e08 5', mRNA sequence. Length=543 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|BJ469445.1| BJ469445 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal23a17 5', mRNA sequence. Length=560 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >dbj|AV934494.1| AV934494 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i18 5', mRNA sequence. Length=482 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 378 TGCCTGGCTCCCTGTATGCC 359 >dbj|AV934488.1| AV934488 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal9i09 5', mRNA sequence. Length=412 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 349 TGCCTGGCTCCCTGTATGCC 330 >dbj|AV933114.1| AV933114 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal5g15 5', mRNA sequence. Length=608 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 341 TGCCTGGCTCCCTGTATGCC 322 >dbj|AV932125.1| AV932125 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal2f23 5', mRNA sequence. Length=479 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 377 TGCCTGGCTCCCTGTATGCC 358 >gb|BF622299.2| HVSMEa0002K04f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K04f, mRNA sequence. Length=849 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGCC 20 |||||||||||||||||||| Sbjct 264 TGCCTGGCTCCCTGTATGCC 245 >gb|BF622307.1| HVSMEa0002K14f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0002K14f, mRNA sequence. Length=875 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 TGCCTGGCTCCCTGTATGC 19 ||||||||||||||||||| Sbjct 279 TGCCTGGCTCCCTGTATGC 261 Query= osa-miR821b MIMAT0004083 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|FD527963.1| RUS110E11w HZ Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY868870.1| BY868870 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 dbj|BY868178.1| BY868178 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 dbj|BY867111.1| BY867111 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 gb|CX627884.1| GBN006K02u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|CK565751.1| HO01G01w HO Hordeum vulgare cDNA clone HO01G01... 33.7 0.055 gb|CB874555.1| HX05K01w HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB858633.1| HI07M05w HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA015859.1| HV11L19u HV Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BI777511.2| EBro04_SQ001_H04_R root, 3 week, salt-stressed... 33.7 0.055 emb|AJ435431.1| AJ435431 S00002 Hordeum vulgare subsp. vulgar... 33.7 0.055 dbj|AV835884.1| AV835884 K. Sato unpublished cDNA library: Ho... 33.7 0.055 emb|AL503071.1| AL503071 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 emb|AL502447.1| AL502447 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 gb|BE422217.1| HWM021cF.09r ITEC HWM Barley Leaf Library Hord... 33.7 0.055 ALIGNMENTS >gb|FD527963.1| RUS110E11w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65G06, mRNA sequence. Length=592 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 140 TCAACAAAAAAGTTGAAT 123 >dbj|BY868870.1| BY868870 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart46g03 3', mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 168 TCAACAAAAAAGTTGAAT 151 >dbj|BY868178.1| BY868178 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart38c04 3', mRNA sequence. Length=510 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 146 TCAACAAAAAAGTTGAAT 129 >dbj|BY867111.1| BY867111 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart25g07 3', mRNA sequence. Length=416 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 149 TCAACAAAAAAGTTGAAT 132 >gb|CX627884.1| GBN006K02u GBN Hordeum vulgare cDNA clone GBN006K02 3-PRIME, mRNA sequence. Length=201 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 158 TCAACAAAAAAGTTGAAT 141 >gb|CK565751.1| HO01G01w HO Hordeum vulgare cDNA clone HO01G01 3-PRIME, mRNA sequence. Length=261 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 115 TCAACAAAAAAGTTGAAT 98 >gb|CB874555.1| HX05K01w HX Hordeum vulgare subsp. vulgare cDNA clone HX05K01 3-PRIME, mRNA sequence. Length=585 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 168 TCAACAAAAAAGTTGAAT 151 >gb|CB858633.1| HI07M05w HI Hordeum vulgare subsp. vulgare cDNA clone HI07M05 3-PRIME, mRNA sequence. Length=615 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 162 TCAACAAAAAAGTTGAAT 145 >gb|CA015859.1| HV11L19u HV Hordeum vulgare subsp. vulgare cDNA clone HV11L19 3-PRIME, mRNA sequence. Length=491 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 164 TCAACAAAAAAGTTGAAT 147 >gb|BI777511.2| EBro04_SQ001_H04_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ001_H04 5', mRNA sequence. Length=519 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 351 TCAACAAAAAAGTTGAAT 368 >emb|AJ435431.1| AJ435431 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200053B01F1, mRNA sequence. Length=477 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 308 TCAACAAAAAAGTTGAAT 325 >dbj|AV835884.1| AV835884 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah23m14, mRNA sequence. Length=414 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 153 TCAACAAAAAAGTTGAAT 136 >emb|AL503071.1| AL503071 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09J21 3', mRNA sequence. Length=494 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 167 TCAACAAAAAAGTTGAAT 150 >emb|AL502447.1| AL502447 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW07J24 3', mRNA sequence. Length=641 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 167 TCAACAAAAAAGTTGAAT 150 >gb|BE422217.1| HWM021cF.09r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM021cF.09, mRNA sequence. Length=1193 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 7 TCAACAAAAAAGTTGAAT 24 |||||||||||||||||| Sbjct 336 TCAACAAAAAAGTTGAAT 353 Query= osa-miR444d.3 MIMAT0005972 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA li... 35.6 0.016 gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, ... 35.6 0.016 gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, ... 35.6 0.016 gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no tr... 35.6 0.016 emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 ALIGNMENTS >gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0048D04f, mRNA sequence. Length=613 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 345 TTGTGGCTTTCTTGCAAGT 363 >gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDNA clone HL02K16 3-PRIME, mRNA sequence. Length=634 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 186 TTGTGGCTTTCTTGCAAGT 204 >gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDNA clone HV12I24 5-PRIME, mRNA sequence. Length=555 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 178 TTGTGGCTTTCTTGCAAGT 196 >gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDNA clone HU09P07 5-PRIME, mRNA sequence. Length=638 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 194 TTGTGGCTTTCTTGCAAGT 212 >gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H03 5-PRIME, mRNA sequence. Length=542 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 425 TTGTGGCTTTCTTGCAAGT 443 >gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M24 5', mRNA sequence. Length=679 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 203 TTGTGGCTTTCTTGCAAGT 221 >gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M04 5', mRNA sequence. Length=675 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 203 TTGTGGCTTTCTTGCAAGT 221 >gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ002_L15 5', mRNA sequence. Length=357 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 126 TTGTGGCTTTCTTGCAAGT 144 >emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW01I03 5', mRNA sequence. Length=565 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 TTGTGGCTTTCTTGCAAGT 19 ||||||||||||||||||| Sbjct 194 TTGTGGCTTTCTTGCAAGT 212 Query= osa-miR444f MIMAT0005976 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA li... 33.7 0.055 gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05... 33.7 0.055 gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA007403.1| HU07N19r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, ... 33.7 0.055 gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, ... 33.7 0.055 gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no tr... 33.7 0.055 emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum ... 33.7 0.055 ALIGNMENTS >gb|GH228935.1| HVSMEn0024P10r2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0048D04f, mRNA sequence. Length=613 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 266 TGCAGTTGTTGCCTCATGCTT 246 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 366 TGCAGTTGCTGCCTCAAGCTT 386 >gb|DN188095.1| HO24A05w HO Hordeum vulgare cDNA clone HO24A05 3-PRIME, mRNA sequence. Length=677 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 553 TGCAGTTGTTGCCTCATGCTT 573 >gb|CB882722.1| HL02K16w HL Hordeum vulgare subsp. vulgare cDNA clone HL02K16 3-PRIME, mRNA sequence. Length=634 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 107 TGCAGTTGTTGCCTCATGCTT 87 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 207 TGCAGTTGCTGCCTCAAGCTT 227 >gb|CA019616.1| HV12I24r HV Hordeum vulgare subsp. vulgare cDNA clone HV12I24 5-PRIME, mRNA sequence. Length=555 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 99 TGCAGTTGTTGCCTCATGCTT 79 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 199 TGCAGTTGCTGCCTCAAGCTT 219 >gb|CA008118.1| HU09P07r HU Hordeum vulgare subsp. vulgare cDNA clone HU09P07 5-PRIME, mRNA sequence. Length=638 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 115 TGCAGTTGTTGCCTCATGCTT 95 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 215 TGCAGTTGCTGCCTCAAGCTT 235 >gb|CA007403.1| HU07N19r HU Hordeum vulgare subsp. vulgare cDNA clone HU07N19 5-PRIME, mRNA sequence. Length=166 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 116 TGCAGTTGTTGCCTCATGCTT 96 >gb|CA006693.1| HU05H03r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H03 5-PRIME, mRNA sequence. Length=542 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 346 TGCAGTTGTTGCCTCATGCTT 326 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 446 TGCAGTTGCTGCCTCAAGCTT 466 >gb|BQ765702.1| EBro03_SQ007_M24_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M24 5', mRNA sequence. Length=679 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 124 TGCAGTTGTTGCCTCATGCTT 104 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 224 TGCAGTTGCTGCCTCAAGCTT 244 >gb|BQ765438.1| EBro03_SQ007_M04_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ007_M04 5', mRNA sequence. Length=675 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 124 TGCAGTTGTTGCCTCATGCTT 104 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 224 TGCAGTTGCTGCCTCAAGCTT 244 >gb|BQ754066.1| EBca01_SQ002_L15_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ002_L15 5', mRNA sequence. Length=357 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 147 TGCAGTTGCTGCCTCAAGCTT 167 >emb|AL504006.1| AL504006 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW01I03 5', mRNA sequence. Length=565 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||||||||||| |||| Sbjct 115 TGCAGTTGTTGCCTCATGCTT 95 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGCAGTTGTTGCCTCAAGCTT 21 |||||||| |||||||||||| Sbjct 215 TGCAGTTGCTGCCTCAAGCTT 235 Query= osa-miR396f MIMAT0010070 Length=22 Score E Sequences producing significant alignments: (Bits) Value dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv... 41.0 4e-04 gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24... 35.6 0.016 gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08... 35.6 0.016 gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST libr... 35.6 0.016 ALIGNMENTS >dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd24d08 5', mRNA sequence. Length=654 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TCTCCACAGGCTTTCTTGAACT 22 |||||||||||||||||||||| Sbjct 11 TCTCCACAGGCTTTCTTGAACT 32 >gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP09M03, mRNA sequence. Length=681 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 140 TCCACAGGCTTTCTTGAAC 122 >gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24 5-PRIME, mRNA sequence. Length=656 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 413 TCCACAGGCTTTCTTGAAC 395 >gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08 5-PRIME, mRNA sequence. Length=465 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 118 TCCACAGGCTTTCTTGAAC 100 >gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDNA clone HX09M20 5-PRIME, mRNA sequence. Length=633 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 534 TCCACAGGCTTTCTTGAAC 516 >gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDNA clone HX05A15 5-PRIME, mRNA sequence. Length=640 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 556 TCCACAGGCTTTCTTGAAC 538 >gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O21 5-PRIME, mRNA sequence. Length=271 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 159 TCCACAGGCTTTCTTGAAC 141 >gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDNA clone HX04P12 3-PRIME, mRNA sequence. Length=476 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 280 TCCACAGGCTTTCTTGAAC 298 >gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDNA clone HI05C18 3-PRIME, mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 280 TCCACAGGCTTTCTTGAAC 298 >gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDNA clone HX03F05 5-PRIME, mRNA sequence. Length=658 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 309 TCCACAGGCTTTCTTGAAC 291 >gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0017E21f, mRNA sequence. Length=584 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 85 TCCACAGGCTTTCTTGAAC 67 >gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016O19f, mRNA sequence. Length=641 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TCCACAGGCTTTCTTGAAC 21 ||||||||||||||||||| Sbjct 277 TCCACAGGCTTTCTTGAAC 259 Query= osa-miR393b MIMAT0001078 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot... 33.7 0.055 gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum... 33.7 0.055 gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06... 33.7 0.055 gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv... 33.7 0.055 emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 ALIGNMENTS >gb|GH212603.1| HVSMEb0008B16r2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0011D18f, mRNA sequence. Length=542 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 344 TCCAAAGGGATCGCATTG 361 >gb|CV055207.1| BNEL118a3 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL118a3 5' similar to similar to Arabidopsis thaliana transport inhibitor response 1, mRNA sequence. Length=688 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 54 TCCAAAGGGATCGCATTG 37 >gb|CB860441.1| HH06K06w HH Hordeum vulgare cDNA clone HH06K06 5-PRIME, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 587 TCCAAAGGGATCGCATTG 570 >gb|CA004635.1| HS18D14r HS Hordeum vulgare subsp. vulgare cDNA clone HS18D14 5-PRIME, mRNA sequence. Length=419 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 50 TCCAAAGGGATCGCATTG 33 >gb|BU973213.1| HB24C09r BC Hordeum vulgare subsp. vulgare cDNA clone HB24C09 5-PRIME, mRNA sequence. Length=501 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 439 TCCAAAGGGATCGCATTG 422 >dbj|BJ461212.1| BJ461212 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 3', mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 532 TCCAAAGGGATCGCATTG 549 >dbj|BJ453671.1| BJ453671 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44a23 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 564 TCCAAAGGGATCGCATTG 547 >emb|AJ432418.1| AJ432418 S00011 Hordeum vulgare cDNA clone S0001100015F03F1, mRNA sequence. Length=657 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 217 TCCAAAGGGATCGCATTG 200 >gb|BE603282.2| HVSMEh0102P10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0102P10f, mRNA sequence. Length=529 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TCCAAAGGGATCGCATTG 18 |||||||||||||||||| Sbjct 323 TCCAAAGGGATCGCATTG 306 Query= osa-miR166m MIMAT0001087 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 37.4 0.004 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 37.4 0.004 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCC 20 |||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCC 157 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCC 20 |||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCC 155 Query= osa-miR1846e MIMAT0010042 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BF260887.2| HVSMEf0023D07f Hordeum vulgare seedling root E... 35.6 0.016 ALIGNMENTS >gb|BF260887.2| HVSMEf0023D07f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0023D07f, mRNA sequence. Length=826 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 1 CAACGAGGAGGCCGGGACC 19 ||||||||||||||||||| Sbjct 403 CAACGAGGAGGCCGGGACC 421 Query= osa-miR414 MIMAT0001330 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD522676.1| RUS78B10w HF Hordeum vulgare subsp. vulgare cD... 37.4 0.004 dbj|BJ483887.1| BJ483887 K. Sato unpublished cDNA library, st... 37.4 0.004 emb|AJ463398.1| AJ463398 S00002 Hordeum vulgare subsp. vulgar... 37.4 0.004 gb|GH215882.1| HVSMEf0015M08r2 Hordeum vulgare seedling root ... 33.7 0.055 gb|FD522901.1| RUS56H05w HF Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD521791.1| RUS05E04w HA Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD519920.1| RUS11F01w HA Hordeum vulgare subsp. vulgare cD... 33.7 0.055 dbj|BY872409.1| BY872409 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|DN180462.1| HO27A10S HO Hordeum vulgare cDNA clone HO27A10... 33.7 0.055 gb|CX629594.1| GCW002N23r GCW Hordeum vulgare cDNA clone GCW0... 33.7 0.055 gb|CV062462.1| BNEL7C9 Barley EST endosperm library Hordeum v... 33.7 0.055 gb|CV062354.1| BNEL79b10 Barley EST endosperm library Hordeum... 33.7 0.055 gb|CV059257.1| BNEL46b3 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CK123902.1| BES1824105p13 BES1824 Hordeum vulgare subsp. v... 33.7 0.055 gb|CK123482.1| BES1824104c20 BES1824 Hordeum vulgare subsp. v... 33.7 0.055 gb|CB881094.1| HM08M04w HM Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB875758.1| HX09E08w HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB874465.1| HX05F16w HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB869782.1| HC12H01w CH Hordeum vulgare cDNA clone HC12H01... 33.7 0.055 gb|CB863626.1| HH04G09y HH Hordeum vulgare cDNA clone HH04G09... 33.7 0.055 gb|CB858222.1| HI06D13w HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ549806.1| BJ549806 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ549768.1| BJ549768 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ549562.1| BJ549562 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ549281.1| BJ549281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ543981.1| BJ543981 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ543899.1| BJ543899 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|CA031192.1| HX09E08r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA030825.1| HX08D23r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA029835.1| HX05F16r HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA023204.1| HZ45I17r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA023131.1| HZ45F06r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA021043.1| HZ38P02r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA019260.1| HV11G15r HV Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA017576.1| HV05J16r HV Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA013167.1| HT07J14r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA004561.1| HS17P22r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA003748.1| HS15H02r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA002862.1| HS08L22r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA002325.1| HS07C15r HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU996890.1| HI06D13r HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU993145.1| HD12L11r HD Hordeum vulgare cDNA clone HD12L11... 33.7 0.055 gb|BU989445.1| HF21M03r HF Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU987653.1| HF15G01r HF Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU983969.1| HA31J12r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU983589.1| HA30D17r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU983266.1| HA29C04r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU981639.1| HA24D08r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU980322.1| HA20F07r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU977216.1| HA11A16r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU975413.1| HB31A24r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU972641.1| HB22E12r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU970710.1| HB15H05r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU968828.1| HB08L11r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966857.1| HB02J08r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ766907.1| EBro08_SQ007_O11_R root, 3 week, drought-stres... 33.7 0.055 gb|BQ766211.1| EBro08_SQ005_H11_R root, 3 week, drought-stres... 33.7 0.055 gb|BQ759811.1| EBpi05_SQ004_P10_R pistil, 8 DPA, no treatment... 33.7 0.055 gb|BQ759670.1| EBpi05_SQ003_N16_R pistil, 8 DPA, no treatment... 33.7 0.055 gb|BI779417.2| EBro01_SQ003_P08_R root, 3 week, hydroponic gr... 33.7 0.055 gb|BM372712.2| EBpi05_SQ003_L16_R pistil, 8 DPA, no treatment... 33.7 0.055 gb|BM098136.2| EBpi03_SQ002_K12_R pistil, 4 DPA, no treatment... 33.7 0.055 gb|BM376248.2| EBma01_SQ002_M18_R maternal, 4 DPA, no treatme... 33.7 0.055 gb|BI779941.2| EBem07_SQ001_L19_R embryo, 28 DPA, no treatmen... 33.7 0.055 gb|BM375782.2| EBem06_SQ004_G11_R embryo, 21 DPA, no treatmen... 33.7 0.055 gb|BM375756.2| EBem06_SQ004_F05_R embryo, 21 DPA, no treatmen... 33.7 0.055 gb|BI780402.2| EBem06_SQ001_M09_R embryo, 21 DPA, no treatmen... 33.7 0.055 gb|BM377485.2| EBem04_SQ003_E10_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BM097682.2| EBem04_SQ002_G11_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BQ469640.1| HZ01G21r HZ Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ466775.1| HS01I18T HS Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ464684.1| HF02P12r HF Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ462213.1| HD02A17r HD Hordeum vulgare cDNA clone HD02A17... 33.7 0.055 gb|BQ460277.1| HA06L12r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ459712.1| HA08F01r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ459299.1| HA01J03r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ458595.1| HA04M14r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ458535.1| HA04P02r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 emb|AJ484531.1| AJ484531 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ484529.1| AJ484529 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ484528.1| AJ484528 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ480350.1| AJ480350 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ465879.1| AJ465879 S00007 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ464292.1| AJ464292 S00007 Hordeum vulgare cDNA clone S0... 33.7 0.055 emb|AJ432426.1| AJ432426 S00011 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|AV942356.1| AV942356 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV941158.1| AV941158 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV937556.1| AV937556 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV937472.1| AV937472 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV937410.1| AV937410 K. Sato unpublished cDNA library, st... 33.7 0.055 dbj|AV921518.1| AV921518 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV921412.1| AV921412 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV921124.1| AV921124 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV915428.1| AV915428 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV913905.1| AV913905 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV913800.1| AV913800 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV912777.1| AV912777 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BG414930.2| HVSMEk0004E21f Hordeum vulgare testa/pericarp ... 33.7 0.055 gb|BE601725.3| HVSMEh0099F01f Hordeum vulgare 5-45 DAP spike ... 33.7 0.055 gb|BG344143.2| HVSMEg0007N04f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BG343970.2| HVSMEg0007E06f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|AW982339.3| HVSMEg0003A02f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BI955239.1| HVSMEm0022B05f Hordeum vulgare green seedling ... 33.7 0.055 gb|BI947590.1| HVSMEl0006A07f Hordeum vulgare spike EST libra... 33.7 0.055 gb|BG414387.1| HVSMEk0002A10f Hordeum vulgare testa/pericarp ... 33.7 0.055 gb|BF065291.2| HV_CEb0012A14f Hordeum vulgare seedling green ... 33.7 0.055 gb|BG367250.1| HVSMEi0011H15f Hordeum vulgare 20 DAP spike ES... 33.7 0.055 gb|BG343488.1| HVSMEg0005O09f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BF260907.2| HVSMEf0023E03f Hordeum vulgare seedling root E... 33.7 0.055 gb|BF259945.2| HVSMEf0020L02f Hordeum vulgare seedling root E... 33.7 0.055 gb|BF258740.2| HVSMEf0016I21f Hordeum vulgare seedling root E... 33.7 0.055 gb|BF621429.2| HVSMEa0006O17f Hordeum vulgare seedling shoot ... 33.7 0.055 gb|BF621312.2| HVSMEa0006H07f Hordeum vulgare seedling shoot ... 33.7 0.055 emb|AL508968.1| AL508968 Hordeum vulgare Barke developing car... 33.7 0.055 emb|AL508687.1| AL508687 Hordeum vulgare Barke developing car... 33.7 0.055 emb|AL508523.1| AL508523 Hordeum vulgare Barke developing car... 33.7 0.055 gb|BF624285.1| HVSMEa0013G23f Hordeum vulgare seedling shoot ... 33.7 0.055 ALIGNMENTS >gb|FD522676.1| RUS78B10w HF Hordeum vulgare subsp. vulgare cDNA clone HF24H04, mRNA sequence. Length=615 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 CATCCTCATCATCATCGTCC 21 |||||||||||||||||||| Sbjct 575 CATCCTCATCATCATCGTCC 594 >dbj|BJ483887.1| BJ483887 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah47m19 3', mRNA sequence. Length=597 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 CATCCTCATCATCATCGTCC 21 |||||||||||||||||||| Sbjct 510 CATCCTCATCATCATCGTCC 529 >emb|AJ463398.1| AJ463398 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200073C01F1, mRNA sequence. Length=420 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 2 CATCCTCATCATCATCGTCC 21 |||||||||||||||||||| Sbjct 167 CATCCTCATCATCATCGTCC 148 >gb|GH215882.1| HVSMEf0015M08r2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HVcDNA0007)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0019M22f, mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 ATCCTCATCATCATCGTC 20 |||||||||||||||||| Sbjct 433 ATCCTCATCATCATCGTC 416 >gb|FD522901.1| RUS56H05w HF Hordeum vulgare subsp. vulgare cDNA clone HF02P12, mRNA sequence. Length=692 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 658 TCATCCTCATCATCATCATCC 678 >gb|FD521791.1| RUS05E04w HA Hordeum vulgare subsp. vulgare cDNA clone HA05A10, mRNA sequence. Length=375 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||| ||||||||| Sbjct 283 TCATCCTCATCGTCATCGTCC 263 >gb|FD519920.1| RUS11F01w HA Hordeum vulgare subsp. vulgare cDNA clone HA11A16, mRNA sequence. Length=671 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 455 TCGTCCTCATCATCATCGTCC 475 >dbj|BY872409.1| BY872409 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast47h04 3', mRNA sequence. Length=401 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||| ||||||||| Sbjct 229 TCATCCTCATCGTCATCGTCC 209 >gb|DN180462.1| HO27A10S HO Hordeum vulgare cDNA clone HO27A10 5-PRIME, mRNA sequence. Length=374 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 246 TCATCCTCATCATCATCATCC 226 >gb|CX629594.1| GCW002N23r GCW Hordeum vulgare cDNA clone GCW002N23 5-PRIME, mRNA sequence. Length=200 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||| ||||||||| Sbjct 122 TCATCCTCATCGTCATCGTCC 142 >gb|CV062462.1| BNEL7C9 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL7C9 5' similar to nascent polypeptide associated complex alpha chain, mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 227 TCATCCTCATCATCATCATCC 207 >gb|CV062354.1| BNEL79b10 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL79b10 5' similar to nascent polypeptide associated complex alpha chain, mRNA sequence. Length=717 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 227 TCATCCTCATCATCATCATCC 207 >gb|CV059257.1| BNEL46b3 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL46b3 5' similar to nascent polypeptide associated complex alpha chain, mRNA sequence. Length=639 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 212 TCATCCTCATCATCATCATCC 192 >gb|CK123902.1| BES1824105p13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010P13105 5-PRIME, mRNA sequence. Length=666 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 176 TCATCCTCATCATCATCATCC 156 >gb|CK123482.1| BES1824104c20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010C20104 5-PRIME, mRNA sequence. Length=439 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 83 TCATCCTCATCATCATCATCC 63 >gb|CB881094.1| HM08M04w HM Hordeum vulgare subsp. vulgare cDNA clone HM08M04 3-PRIME, mRNA sequence. Length=674 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 631 TCATCCTCATCATCATCATCC 651 >gb|CB875758.1| HX09E08w HX Hordeum vulgare subsp. vulgare cDNA clone HX09E08 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 641 TCATCCTCATCATCATCATCC 661 >gb|CB874465.1| HX05F16w HX Hordeum vulgare subsp. vulgare cDNA clone HX05F16 3-PRIME, mRNA sequence. Length=688 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 627 TCATCCTCATCATCATCATCC 647 >gb|CB869782.1| HC12H01w CH Hordeum vulgare cDNA clone HC12H01 5-PRIME, mRNA sequence. Length=640 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 99 TCTTCCTCATCATCATCGTCC 79 >gb|CB863626.1| HH04G09y HH Hordeum vulgare cDNA clone HH04G09 3-PRIME, mRNA sequence. Length=623 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||| ||||||||| Sbjct 248 TCATCCTCATCGTCATCGTCC 228 >gb|CB858222.1| HI06D13w HI Hordeum vulgare subsp. vulgare cDNA clone HI06D13 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 658 TCATCCTCATCATCATCATCC 678 >dbj|BJ549806.1| BJ549806 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags32m01 3', mRNA sequence. Length=666 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 642 TCATCCTCATCATCATCATCC 662 >dbj|BJ549768.1| BJ549768 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags31l21 3', mRNA sequence. Length=679 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 644 TCATCCTCATCATCATCATCC 664 >dbj|BJ549562.1| BJ549562 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags39b21 5', mRNA sequence. Length=659 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 65 TCATCCTCATCATCATCATCC 45 >dbj|BJ549281.1| BJ549281 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags32m01 5', mRNA sequence. Length=447 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 224 TCATCCTCATCATCATCATCC 204 >dbj|BJ543981.1| BJ543981 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak17b17 5', mRNA sequence. Length=628 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 243 TCATCCTCATCATCATCATCC 223 >dbj|BJ543899.1| BJ543899 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak14l08 5', mRNA sequence. Length=587 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 238 TCATCCTCATCATCATCATCC 218 >gb|CA031192.1| HX09E08r HX Hordeum vulgare subsp. vulgare cDNA clone HX09E08 5-PRIME, mRNA sequence. Length=652 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 242 TCATCCTCATCATCATCATCC 222 >gb|CA030825.1| HX08D23r HX Hordeum vulgare subsp. vulgare cDNA clone HX08D23 5-PRIME, mRNA sequence. Length=652 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 251 TCATCCTCATCATCATCATCC 231 >gb|CA029835.1| HX05F16r HX Hordeum vulgare subsp. vulgare cDNA clone HX05F16 5-PRIME, mRNA sequence. Length=656 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 246 TCATCCTCATCATCATCATCC 226 >gb|CA023204.1| HZ45I17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45I17 5-PRIME, mRNA sequence. Length=608 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >gb|CA023131.1| HZ45F06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45F06 5-PRIME, mRNA sequence. Length=551 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 252 TCATCCTCATCATCATCATCC 232 >gb|CA021043.1| HZ38P02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ38P02 5-PRIME, mRNA sequence. Length=590 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 249 TCATCCTCATCATCATCATCC 229 >gb|CA019260.1| HV11G15r HV Hordeum vulgare subsp. vulgare cDNA clone HV11G15 5-PRIME, mRNA sequence. Length=657 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >gb|CA017576.1| HV05J16r HV Hordeum vulgare subsp. vulgare cDNA clone HV05J16 5-PRIME, mRNA sequence. Length=500 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 229 TCATCCTCATCATCATCATCC 209 >gb|CA013167.1| HT07J14r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J14 5-PRIME, mRNA sequence. Length=490 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 207 TCATCCTCATCATCATCATCC 187 >gb|CA004561.1| HS17P22r HS Hordeum vulgare subsp. vulgare cDNA clone HS17P22 5-PRIME, mRNA sequence. Length=394 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >gb|CA003748.1| HS15H02r HS Hordeum vulgare subsp. vulgare cDNA clone HS15H02 5-PRIME, mRNA sequence. Length=557 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 214 TCATCCTCATCATCATCATCC 194 >gb|CA002862.1| HS08L22r HS Hordeum vulgare subsp. vulgare cDNA clone HS08L22 5-PRIME, mRNA sequence. Length=456 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 252 TCATCCTCATCATCATCATCC 232 >gb|CA002325.1| HS07C15r HS Hordeum vulgare subsp. vulgare cDNA clone HS07C15 5-PRIME, mRNA sequence. Length=347 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 249 TCATCCTCATCATCATCATCC 229 >gb|BU996890.1| HI06D13r HI Hordeum vulgare subsp. vulgare cDNA clone HI06D13 5-PRIME, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 245 TCATCCTCATCATCATCATCC 225 >gb|BU993145.1| HD12L11r HD Hordeum vulgare cDNA clone HD12L11 5-PRIME, mRNA sequence. Length=314 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 199 TCATCCTCATCATCATCATCC 179 >gb|BU989445.1| HF21M03r HF Hordeum vulgare subsp. vulgare cDNA clone HF21M03 5-PRIME, mRNA sequence. Length=614 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 174 TCATCCTCATCATCATCATCC 154 >gb|BU987653.1| HF15G01r HF Hordeum vulgare subsp. vulgare cDNA clone HF15G01 5-PRIME, mRNA sequence. Length=453 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 199 TCATCCTCATCATCATCATCC 179 >gb|BU983969.1| HA31J12r HA Hordeum vulgare subsp. vulgare cDNA clone HA31J12 5-PRIME, mRNA sequence. Length=586 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 234 TCATCCTCATCATCATCATCC 214 >gb|BU983589.1| HA30D17r HA Hordeum vulgare subsp. vulgare cDNA clone HA30D17 5-PRIME, mRNA sequence. Length=626 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 214 TCATCCTCATCATCATCATCC 194 >gb|BU983266.1| HA29C04r HA Hordeum vulgare subsp. vulgare cDNA clone HA29C04 5-PRIME, mRNA sequence. Length=600 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 246 TCATCCTCATCATCATCATCC 226 >gb|BU981639.1| HA24D08r HA Hordeum vulgare subsp. vulgare cDNA clone HA24D08 5-PRIME, mRNA sequence. Length=593 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 214 TCATCCTCATCATCATCATCC 194 >gb|BU980322.1| HA20F07r HA Hordeum vulgare subsp. vulgare cDNA clone HA20F07 5-PRIME, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 229 TCATCCTCATCATCATCATCC 209 >gb|BU977216.1| HA11A16r HA Hordeum vulgare subsp. vulgare cDNA clone HA11A16 5-PRIME, mRNA sequence. Length=419 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 181 TCGTCCTCATCATCATCGTCC 161 >gb|BU975413.1| HB31A24r BC Hordeum vulgare subsp. vulgare cDNA clone HB31A24 5-PRIME, mRNA sequence. Length=624 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 236 TCATCCTCATCATCATCATCC 216 >gb|BU972641.1| HB22E12r BC Hordeum vulgare subsp. vulgare cDNA clone HB22E12 5-PRIME, mRNA sequence. Length=633 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 252 TCATCCTCATCATCATCATCC 232 >gb|BU970710.1| HB15H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB15H05 5-PRIME, mRNA sequence. Length=549 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 252 TCATCCTCATCATCATCATCC 232 >gb|BU968828.1| HB08L11r BC Hordeum vulgare subsp. vulgare cDNA clone HB08L11 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 236 TCATCCTCATCATCATCATCC 216 >gb|BU966857.1| HB02J08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02J08 5-PRIME, mRNA sequence. Length=403 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 201 TCATCCTCATCATCATCATCC 181 >gb|BQ766907.1| EBro08_SQ007_O11_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ007_O11 5', mRNA sequence. Length=496 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 ATCCTCATCATCATCGTC 20 |||||||||||||||||| Sbjct 79 ATCCTCATCATCATCGTC 96 >gb|BQ766211.1| EBro08_SQ005_H11_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vulgare cDNA clone EBro08_SQ005_H11 5', mRNA sequence. Length=692 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 104 TCATCCTCATCATCATCATCC 84 >gb|BQ759811.1| EBpi05_SQ004_P10_R pistil, 8 DPA, no treatment, cv Optic, EBpi05 Hordeum vulgare subsp. vulgare cDNA clone EBpi05_SQ004_P10 5', mRNA sequence. Length=662 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 80 TCATCCTCATCATCATCATCC 60 >gb|BQ759670.1| EBpi05_SQ003_N16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05 Hordeum vulgare subsp. vulgare cDNA clone EBpi05_SQ003_N16 5', mRNA sequence. Length=232 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 192 TCATCCTCATCATCATCATCC 172 >gb|BI779417.2| EBro01_SQ003_P08_R root, 3 week, hydroponic grown, no treatment, cv Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone EBro01_SQ003_P08 5', mRNA sequence. Length=569 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 243 TCATCCTCATCATCATCATCC 223 >gb|BM372712.2| EBpi05_SQ003_L16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05 Hordeum vulgare subsp. vulgare cDNA clone EBpi05_SQ003_L16 5', mRNA sequence. Length=517 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 191 TCATCCTCATCATCATCATCC 171 >gb|BM098136.2| EBpi03_SQ002_K12_R pistil, 4 DPA, no treatment, cv Optic, EBpi03 Hordeum vulgare subsp. vulgare cDNA clone EBpi03_SQ002_K12 5', mRNA sequence. Length=607 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 199 TCATCCTCATCATCATCATCC 179 >gb|BM376248.2| EBma01_SQ002_M18_R maternal, 4 DPA, no treatment, cv Optic, EBma01 Hordeum vulgare subsp. vulgare cDNA clone EBma01_SQ002_M18 5', mRNA sequence. Length=525 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 199 TCATCCTCATCATCATCATCC 179 >gb|BI779941.2| EBem07_SQ001_L19_R embryo, 28 DPA, no treatment, cv Optic, EBem07 Hordeum vulgare subsp. vulgare cDNA clone EBem07_SQ001_L19 5', mRNA sequence. Length=499 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 234 TCATCCTCATCATCATCATCC 214 >gb|BM375782.2| EBem06_SQ004_G11_R embryo, 21 DPA, no treatment, cv Optic, EBem06 Hordeum vulgare subsp. vulgare cDNA clone EBem06_SQ004_G11 5', mRNA sequence. Length=556 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 237 TCATCCTCATCATCATCATCC 217 >gb|BM375756.2| EBem06_SQ004_F05_R embryo, 21 DPA, no treatment, cv Optic, EBem06 Hordeum vulgare subsp. vulgare cDNA clone EBem06_SQ004_F05 5', mRNA sequence. Length=456 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 237 TCATCCTCATCATCATCATCC 217 >gb|BI780402.2| EBem06_SQ001_M09_R embryo, 21 DPA, no treatment, cv Optic, EBem06 Hordeum vulgare subsp. vulgare cDNA clone EBem06_SQ001_M09 5', mRNA sequence. Length=542 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 242 TCATCCTCATCATCATCATCC 222 >gb|BM377485.2| EBem04_SQ003_E10_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ003_E10 5', mRNA sequence. Length=587 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 185 TCATCCTCATCATCATCATCC 165 >gb|BM097682.2| EBem04_SQ002_G11_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_G11 5', mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 195 TCATCCTCATCATCATCATCC 175 >gb|BQ469640.1| HZ01G21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G21 5-PRIME, mRNA sequence. Length=428 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >gb|BQ466775.1| HS01I18T HS Hordeum vulgare subsp. vulgare cDNA clone HS01I18 5-PRIME, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 249 TCATCCTCATCATCATCATCC 229 >gb|BQ464684.1| HF02P12r HF Hordeum vulgare subsp. vulgare cDNA clone HF02P12 5-PRIME, mRNA sequence. Length=641 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 167 TCATCCTCATCATCATCATCC 147 >gb|BQ462213.1| HD02A17r HD Hordeum vulgare cDNA clone HD02A17 5-PRIME, mRNA sequence. Length=559 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 218 TCATCCTCATCATCATCATCC 198 >gb|BQ460277.1| HA06L12r HA Hordeum vulgare subsp. vulgare cDNA clone HA06L12 5-PRIME, mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >gb|BQ459712.1| HA08F01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08F01 5-PRIME, mRNA sequence. Length=510 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 227 TCATCCTCATCATCATCATCC 207 >gb|BQ459299.1| HA01J03r HA Hordeum vulgare subsp. vulgare cDNA clone HA01J03 5-PRIME, mRNA sequence. Length=550 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 229 TCATCCTCATCATCATCATCC 209 >gb|BQ458595.1| HA04M14r HA Hordeum vulgare subsp. vulgare cDNA clone HA04M14 5-PRIME, mRNA sequence. Length=609 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 230 TCATCCTCATCATCATCATCC 210 >gb|BQ458535.1| HA04P02r HA Hordeum vulgare subsp. vulgare cDNA clone HA04P02 5-PRIME, mRNA sequence. Length=546 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 247 TCATCCTCATCATCATCATCC 227 >emb|AJ484531.1| AJ484531 S00011 Hordeum vulgare cDNA clone S0001100156C11F1, mRNA sequence. Length=360 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 253 TCGTCCTCATCATCATCGTCC 233 >emb|AJ484529.1| AJ484529 S00011 Hordeum vulgare cDNA clone S0001100096B07F1, mRNA sequence. Length=300 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 276 TCGTCCTCATCATCATCGTCC 256 >emb|AJ484528.1| AJ484528 S00011 Hordeum vulgare cDNA clone S0001100096A09F1, mRNA sequence. Length=300 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 || |||||||||||||||||| Sbjct 276 TCGTCCTCATCATCATCGTCC 256 >emb|AJ480350.1| AJ480350 S00011 Hordeum vulgare cDNA clone S0001100129B03F1, mRNA sequence. Length=180 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 144 TCATCCTCATCATCATCATCC 124 >emb|AJ465879.1| AJ465879 S00007 Hordeum vulgare cDNA clone S0000700014E07F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||| ||||||||| Sbjct 364 TCATCCTCATCGTCATCGTCC 384 >emb|AJ464292.1| AJ464292 S00007 Hordeum vulgare cDNA clone S0000700018B11F1, mRNA sequence. Length=480 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 230 TCATCCTCATCATCATCATCC 210 >emb|AJ432426.1| AJ432426 S00011 Hordeum vulgare cDNA clone S0001100084H08F1, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 155 TCATCCTCATCATCATCATCC 135 >dbj|AV942356.1| AV942356 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah11k10 3', mRNA sequence. Length=715 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 632 TCATCCTCATCATCATCATCC 652 >dbj|AV941158.1| AV941158 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah31l23 5', mRNA sequence. Length=624 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 238 TCATCCTCATCATCATCATCC 218 >dbj|AV937556.1| AV937556 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah12i17 5', mRNA sequence. Length=434 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 132 TCATCCTCATCATCATCATCC 112 >dbj|AV937472.1| AV937472 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah11p02 5', mRNA sequence. Length=584 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 197 TCATCCTCATCATCATCATCC 177 >dbj|AV937410.1| AV937410 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah11k10 5', mRNA sequence. Length=628 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 214 TCATCCTCATCATCATCATCC 194 >dbj|AV921518.1| AV921518 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags23l06 3', mRNA sequence. Length=706 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 646 TCATCCTCATCATCATCATCC 666 >dbj|AV921412.1| AV921412 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags23f12 3', mRNA sequence. Length=724 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 631 TCATCCTCATCATCATCATCC 651 >dbj|AV921124.1| AV921124 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags1b09 3', mRNA sequence. Length=690 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 606 TCATCCTCATCATCATCATCC 626 >dbj|AV915428.1| AV915428 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags14f22 5', mRNA sequence. Length=599 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 250 TCATCCTCATCATCATCATCC 230 >dbj|AV913905.1| AV913905 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags23l06 5', mRNA sequence. Length=650 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 130 TCATCCTCATCATCATCATCC 110 >dbj|AV913800.1| AV913800 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags23f12 5', mRNA sequence. Length=636 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 249 TCATCCTCATCATCATCATCC 229 >dbj|AV912777.1| AV912777 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags10d16 5', mRNA sequence. Length=679 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 238 TCATCCTCATCATCATCATCC 218 >gb|BG414930.2| HVSMEk0004E21f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0004E21f, mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 235 TCATCCTCATCATCATCATCC 215 >gb|BE601725.3| HVSMEh0099F01f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0099F01f, mRNA sequence. Length=631 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 235 TCATCCTCATCATCATCATCC 215 >gb|BG344143.2| HVSMEg0007N04f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0007N04f, mRNA sequence. Length=789 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 235 TCATCCTCATCATCATCATCC 215 >gb|BG343970.2| HVSMEg0007E06f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0007E06f, mRNA sequence. Length=785 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 228 TCATCCTCATCATCATCATCC 208 >gb|AW982339.3| HVSMEg0003A02f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0003A02f, mRNA sequence. Length=902 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 238 TCATCCTCATCATCATCATCC 218 >gb|BI955239.1| HVSMEm0022B05f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0022B05f, mRNA sequence. Length=679 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 238 TCATCCTCATCATCATCATCC 218 >gb|BI947590.1| HVSMEl0006A07f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0006A07f, mRNA sequence. Length=971 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 237 TCATCCTCATCATCATCATCC 217 >gb|BG414387.1| HVSMEk0002A10f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0002A10f, mRNA sequence. Length=963 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 200 TCATCCTCATCATCATCATCC 180 >gb|BF065291.2| HV_CEb0012A14f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0012A14f, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 233 TCATCCTCATCATCATCATCC 213 >gb|BG367250.1| HVSMEi0011H15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0011H15f, mRNA sequence. Length=839 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 243 TCATCCTCATCATCATCATCC 223 >gb|BG343488.1| HVSMEg0005O09f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0005O09f, mRNA sequence. Length=948 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 243 TCATCCTCATCATCATCATCC 223 >gb|BF260907.2| HVSMEf0023E03f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0023E03f, mRNA sequence. Length=758 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 179 TCATCCTCATCATCATCATCC 159 >gb|BF259945.2| HVSMEf0020L02f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0020L02f, mRNA sequence. Length=808 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 133 TCATCCTCATCATCATCATCC 113 >gb|BF258740.2| HVSMEf0016I21f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0016I21f, mRNA sequence. Length=596 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 237 TCATCCTCATCATCATCATCC 217 >gb|BF621429.2| HVSMEa0006O17f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0006O17f, mRNA sequence. Length=831 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 240 TCATCCTCATCATCATCATCC 220 >gb|BF621312.2| HVSMEa0006H07f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0006H07f, mRNA sequence. Length=811 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 219 TCATCCTCATCATCATCATCC 199 >emb|AL508968.1| AL508968 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY10F05 5', mRNA sequence. Length=574 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 193 TCATCCTCATCATCATCATCC 173 >emb|AL508687.1| AL508687 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY09I03 5', mRNA sequence. Length=440 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 175 TCATCCTCATCATCATCATCC 155 >emb|AL508523.1| AL508523 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY09A06 5', mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 198 TCATCCTCATCATCATCATCC 178 >gb|BF624285.1| HVSMEa0013G23f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0013G23f, mRNA sequence. Length=508 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCATCCTCATCATCATCGTCC 21 ||||||||||||||||| ||| Sbjct 235 TCATCCTCATCATCATCATCC 215 Query= osa-miR395o MIMAT0003872 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CB882813.1| HL02O16w HL Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA011141.1| HT06M10u HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BI957514.1| HVSMEn0009P08f Hordeum vulgare rachis EST libr... 33.7 0.055 ALIGNMENTS >gb|CB882813.1| HL02O16w HL Hordeum vulgare subsp. vulgare cDNA clone HL02O16 3-PRIME, mRNA sequence. Length=418 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ATGAAGTGTTTGGAGGAACTC 21 |||||||| |||||||||||| Sbjct 343 ATGAAGTGCTTGGAGGAACTC 323 >gb|CA011141.1| HT06M10u HT Hordeum vulgare subsp. vulgare cDNA clone HT06M10 3-PRIME, mRNA sequence. Length=555 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ATGAAGTGTTTGGAGGAACTC 21 |||||||| |||||||||||| Sbjct 87 ATGAAGTGCTTGGAGGAACTC 67 >gb|BI957514.1| HVSMEn0009P08f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009P08f, mRNA sequence. Length=681 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 ATGAAGTGTTTGGAGGAACTC 21 |||||||| |||||||||||| Sbjct 67 ATGAAGTGCTTGGAGGAACTC 47 Query= osa-miR168a MIMAT0001045 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA003609.1| HS15A08r HS Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA003589.1| HS14P05r HS Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 ALIGNMENTS >gb|CA003609.1| HS15A08r HS Hordeum vulgare subsp. vulgare cDNA clone HS15A08 5-PRIME, mRNA sequence. Length=456 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGCTTGGTGCAGATCGGGAC 21 ||||||||||||||||||||| Sbjct 127 TCGCTTGGTGCAGATCGGGAC 147 >gb|CA003589.1| HS14P05r HS Hordeum vulgare subsp. vulgare cDNA clone HS14P05 5-PRIME, mRNA sequence. Length=418 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGCTTGGTGCAGATCGGGAC 21 ||||||||||||||||||||| Sbjct 128 TCGCTTGGTGCAGATCGGGAC 148 Query= osa-miR164d MIMAT0001034 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD526177.1| RUS100E04w HZ Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX573215.1| HDP27L22T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX573211.1| HDP27L22w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|DN187448.1| HO25M19w HO Hordeum vulgare cDNA clone HO25M19... 33.7 0.055 gb|DN180933.1| HO25M19S HO Hordeum vulgare cDNA clone HO25M19... 33.7 0.055 gb|CK566882.1| HO04P03w HO Hordeum vulgare cDNA clone HO04P03... 33.7 0.055 gb|CK565851.1| HO01L09w HO Hordeum vulgare cDNA clone HO01L09... 33.7 0.055 gb|CB864307.1| HD05L07w HD Hordeum vulgare cDNA clone HD05L07... 33.7 0.055 gb|BU991009.1| HD05L07r HD Hordeum vulgare cDNA clone HD05L07... 33.7 0.055 ALIGNMENTS >gb|FD526177.1| RUS100E04w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53C04, mRNA sequence. Length=615 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 330 TGGAGAAGCAGGGCACTTGCT 350 >gb|EX573215.1| HDP27L22T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27L22, mRNA sequence. Length=664 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 496 TGGAGAAGCAGGGCACTTGCT 516 >gb|EX573211.1| HDP27L22w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27L22, mRNA sequence. Length=693 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 394 TGGAGAAGCAGGGCACTTGCT 374 >gb|DN187448.1| HO25M19w HO Hordeum vulgare cDNA clone HO25M19 3-PRIME, mRNA sequence. Length=606 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 362 TGGAGAAGCAGGGCACTTGCT 382 >gb|DN180933.1| HO25M19S HO Hordeum vulgare cDNA clone HO25M19 5-PRIME, mRNA sequence. Length=587 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 226 TGGAGAAGCAGGGCACTTGCT 206 >gb|CK566882.1| HO04P03w HO Hordeum vulgare cDNA clone HO04P03 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 430 TGGAGAAGCAGGGCACTTGCT 450 >gb|CK565851.1| HO01L09w HO Hordeum vulgare cDNA clone HO01L09 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 305 TGGAGAAGCAGGGCACTTGCT 325 >gb|CB864307.1| HD05L07w HD Hordeum vulgare cDNA clone HD05L07 3-PRIME, mRNA sequence. Length=556 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 481 TGGAGAAGCAGGGCACTTGCT 501 >gb|BU991009.1| HD05L07r HD Hordeum vulgare cDNA clone HD05L07 5-PRIME, mRNA sequence. Length=527 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGGAGAAGCAGGGCACGTGCT 21 |||||||||||||||| |||| Sbjct 48 TGGAGAAGCAGGGCACTTGCT 28 Query= osa-miR166e MIMAT0000639 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 33.7 0.055 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 33.7 0.055 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGAACCAGGCTTCATTCCCC 21 ||| ||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCCC 158 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TCGAACCAGGCTTCATTCCCC 21 ||| ||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCCC 156 Query= osa-miR397b MIMAT0000981 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22... 33.7 0.055 gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatmen... 33.7 0.055 gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp ... 33.7 0.055 ALIGNMENTS >gb|FD518508.1| RUS28B03w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB02L08, mRNA sequence. Length=455 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 176 TTGAGTGCAGCGTTGATG 193 >gb|CA014459.1| HT11F23r HT Hordeum vulgare subsp. vulgare cDNA clone HT11F23 5-PRIME, mRNA sequence. Length=589 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 454 TTGAGTGCAGCGTTGATG 437 >gb|CA007960.1| HU09I02r HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 5-PRIME, mRNA sequence. Length=273 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 58 TTGAGTGCAGCGTTGATG 41 >gb|CA005607.1| HU09I02u HU Hordeum vulgare subsp. vulgare cDNA clone HU09I02 3-PRIME, mRNA sequence. Length=274 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 217 TTGAGTGCAGCGTTGATG 234 >gb|BU966899.1| HB02L08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02L08 5-PRIME, mRNA sequence. Length=385 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BU966762.1| HB02E14r BC Hordeum vulgare subsp. vulgare cDNA clone HB02E14 5-PRIME, mRNA sequence. Length=389 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 313 TTGAGTGCAGCGTTGATG 296 >gb|BQ665274.1| HX02N11u HX Hordeum vulgare subsp. vulgare cDNA clone HX02N11 3-PRIME, mRNA sequence. Length=442 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 199 TTGAGTGCAGCGTTGATG 216 >gb|BQ461815.1| HD03C22r HD Hordeum vulgare cDNA clone HD03C22 5-PRIME, mRNA sequence. Length=468 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 305 TTGAGTGCAGCGTTGATG 288 >gb|BM097863.1| EBem04_SQ002_O24_R embryo, 12 DPA, no treatment, cv Optic, EBem04 Hordeum vulgare subsp. vulgare cDNA clone EBem04_SQ002_O24 5', mRNA sequence. Length=239 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 87 TTGAGTGCAGCGTTGATG 70 >gb|BG415888.2| HVSMEk0008M01f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0008M01f, mRNA sequence. Length=462 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TTGAGTGCAGCGTTGATG 21 |||||||||||||||||| Sbjct 265 TTGAGTGCAGCGTTGATG 248 Query= osa-miR159e MIMAT0001026 Length=21 Score E Sequences producing significant alignments: (Bits) Value emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >emb|AJ475696.1| AJ475696 S00008 Hordeum vulgare cDNA clone S0000800055A04F1, mRNA sequence. Length=420 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 23 TTGGATTGAAGGGAGCTC 40 >dbj|BJ456281.1| BJ456281 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 3', mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 221 TTGGATTGAAGGGAGCTC 204 >dbj|BJ448559.1| BJ448559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak20g06 5', mRNA sequence. Length=622 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 TTGGATTGAAGGGAGCTC 19 |||||||||||||||||| Sbjct 377 TTGGATTGAAGGGAGCTC 394 Query= osa-miR399k MIMAT0000994 Length=21 Score E Sequences producing significant alignments: (Bits) Value dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Ho... 33.7 0.055 ALIGNMENTS >dbj|AV835204.1| AV835204 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah27b04, mRNA sequence. Length=541 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TGCCAAAGGAAATTTGCCCCG 21 |||||||||| |||||||||| Sbjct 351 TGCCAAAGGAGATTTGCCCCG 331 Query= sof-miR159e MIMAT0001661 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|AW983226.2| HVSMEg0008M17f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|AW983226.2| HVSMEg0008M17f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0008M17f, mRNA sequence. Length=824 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TTTGGATTGAAAGGAGCTCTT 21 |||||||||| |||||||||| Sbjct 775 TTTGGATTGAGAGGAGCTCTT 795 Query= sbi-miR166d MIMAT0001391 Length=20 Score E Sequences producing significant alignments: (Bits) Value dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vul... 37.4 0.004 gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, ... 37.4 0.004 ALIGNMENTS >dbj|BY841849.1| BY841849 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet63d10 5', mRNA sequence. Length=407 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCC 20 |||||||||||||||||||| Sbjct 138 TCGGACCAGGCTTCATTCCC 157 >gb|BQ760548.1| EBro03_SQ001_G05_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ001_G05 5', mRNA sequence. Length=433 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TCGGACCAGGCTTCATTCCC 20 |||||||||||||||||||| Sbjct 136 TCGGACCAGGCTTCATTCCC 155 Query= tae-miR1138 MIMAT0005373 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|DN180361.1| HO27H17S HO Hordeum vulgare cDNA clone HO27H17... 33.7 0.055 ALIGNMENTS >gb|DN180361.1| HO27H17S HO Hordeum vulgare cDNA clone HO27H17 5-PRIME, mRNA sequence. Length=467 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 AGATGTGACATCCTTAAA 22 |||||||||||||||||| Sbjct 187 AGATGTGACATCCTTAAA 170 Query= tae-miR1118 MIMAT0005353 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|DN159500.1| GPN004G07u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 dbj|BJ470538.1| BJ470538 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >gb|DN159500.1| GPN004G07u GPN Hordeum vulgare cDNA clone GPN004G07 3-PRIME, mRNA sequence. Length=444 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CACTACATTATGGAATGGAGGGA 23 ||| ||||| ||||||||||||| Sbjct 415 CACCACATTGTGGAATGGAGGGA 437 >dbj|BJ470538.1| BJ470538 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal25a03 5', mRNA sequence. Length=313 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CACTACATTATGGAATGGAGGGA 23 ||||||||| ||| ||||||||| Sbjct 165 CACTACATTGTGGTATGGAGGGA 187 Query= tae-miR1130 MIMAT0005365 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|EX586705.1| HDP33L13w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX580539.1| HDP26F19w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX580538.1| HDP26F19T HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|CX626126.1| GAN005E07u GAN Hordeum vulgare cDNA clone GAN0... 35.6 0.016 gb|GH217963.1| HVSMEg0008P07f2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|EX594898.1| HDP28K11w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 gb|BM100733.2| EBpi01_SQ001_F03_R pistil, 1 DPA, no treatment... 33.7 0.055 dbj|BJ474583.1| BJ474583 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BG344337.1| HVSMEg0008P07f Hordeum vulgare pre-anthesis sp... 33.7 0.055 ALIGNMENTS >gb|EX586705.1| HDP33L13w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33L13, mRNA sequence. Length=638 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||||| |||||||||||| Sbjct 254 CCTCCGTCTCATAATGTAAGACG 232 >gb|EX580539.1| HDP26F19w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26F19, mRNA sequence. Length=557 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||||| |||||||||||| Sbjct 254 CCTCCGTCTCATAATGTAAGACG 232 >gb|EX580538.1| HDP26F19T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26F19, mRNA sequence. Length=553 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||||| |||||||||||| Sbjct 300 CCTCCGTCTCATAATGTAAGACG 322 >gb|CX626126.1| GAN005E07u GAN Hordeum vulgare cDNA clone GAN005E07 3-PRIME, mRNA sequence. Length=411 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 CTCCGTCTCGTAATGTAAGACG 23 |||||||||| ||||||||||| Sbjct 323 CTCCGTCTCGCAATGTAAGACG 302 >gb|GH217963.1| HVSMEg0008P07f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0023P15r, mRNA sequence. Length=636 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||| | |||||||||||| Sbjct 472 CCTCCGTCGCATAATGTAAGACG 494 >gb|EX594898.1| HDP28K11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28K11, mRNA sequence. Length=699 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||| ||||| |||||||||||| Sbjct 56 CCTCTGTCTCATAATGTAAGACG 78 >gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN004K19 3-PRIME, mRNA sequence. Length=559 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||| | |||||||||||| Sbjct 488 CCTCCGTCCCATAATGTAAGACG 510 >gb|BM100733.2| EBpi01_SQ001_F03_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulgare cDNA clone EBpi01_SQ001_F03 5', mRNA sequence. Length=517 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||| | |||||||||||| Sbjct 487 CCTCCGTCCCATAATGTAAGACG 509 >dbj|BJ474583.1| BJ474583 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal14p13 3', mRNA sequence. Length=529 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 ||||||| || |||||||||||| Sbjct 107 CCTCCGTTTCATAATGTAAGACG 85 >gb|BG344337.1| HVSMEg0008P07f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0008P07f, mRNA sequence. Length=803 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CCTCCGTCTCGTAATGTAAGACG 23 |||||||| | |||||||||||| Sbjct 472 CCTCCGTCGCATAATGTAAGACG 494 Query= tae-miR1120 MIMAT0005355 Length=24 Score E Sequences producing significant alignments: (Bits) Value dbj|BJ486588.1| BJ486588 K. Sato unpublished cDNA library, st... 39.2 0.001 gb|EX584378.1| HDP04M15T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|CD054149.1| HO02F01S HO Hordeum vulgare cDNA clone HO02F02... 35.6 0.016 emb|AJ461536.1| AJ461536 S00002 Hordeum vulgare subsp. vulgar... 35.6 0.016 dbj|BY877161.1| BY877161 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|CK566710.1| HO04G14w HO Hordeum vulgare cDNA clone HO04G14... 33.7 0.055 ALIGNMENTS >dbj|BJ486588.1| BJ486588 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah61o16 3', mRNA sequence. Length=469 Score = 39.2 bits (42), Expect = 0.001 Identities = 23/24 (95%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 ACATTCTTATATTATGAGACGGAG 24 |||||||||||||||| ||||||| Sbjct 90 ACATTCTTATATTATGGGACGGAG 67 >gb|EX584378.1| HDP04M15T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04M15, mRNA sequence. Length=659 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 ACATTCTTATATTATGAGACGGAG 24 |||||||||||||||| ||| ||| Sbjct 199 ACATTCTTATATTATGGGACAGAG 222 >gb|CD054149.1| HO02F01S HO Hordeum vulgare cDNA clone HO02F02 5-PRIME, mRNA sequence. Length=425 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 3 ATTCTTATATTATGAGACGGAG 24 ||||||||||||||| |||||| Sbjct 345 ATTCTTATATTATGAAACGGAG 366 >emb|AJ461536.1| AJ461536 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200082F02F1, mRNA sequence. Length=180 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 ACATTCTTATATTATGAGACGGAG 24 |||||||||||||||| ||| ||| Sbjct 65 ACATTCTTATATTATGGGACAGAG 42 >dbj|BY877161.1| BY877161 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl44e10 3', mRNA sequence. Length=172 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 7 TTATATTATGAGACGGAG 24 |||||||||||||||||| Sbjct 148 TTATATTATGAGACGGAG 165 >gb|CK566710.1| HO04G14w HO Hordeum vulgare cDNA clone HO04G14 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 ACATTCTTATATTATGAGACGGA 23 ||| ||||||||||||| ||||| Sbjct 146 ACACTCTTATATTATGAAACGGA 168 Query= tae-miR1126 MIMAT0005361 Length=23 Score E Sequences producing significant alignments: (Bits) Value gb|CX629047.1| GCW001A03r GCW Hordeum vulgare cDNA clone GCW0... 42.8 1e-04 gb|CA012080.1| HT04G07r HT Hordeum vulgare subsp. vulgare cDN... 41.0 4e-04 emb|AJ469590.1| AJ469590 S00008 Hordeum vulgare cDNA clone S0... 37.4 0.004 dbj|BJ480160.1| BJ480160 K. Sato unpublished cDNA library, st... 37.4 0.004 gb|BU974512.1| HB28C13r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|EX594051.1| HDP32P11T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581233.1| HDP22B24w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581232.1| HDP22B24T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|CA013466.1| HT08I16r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CA012079.1| HT04G05r HT Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ740191.1| HC111E05 HC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ663275.1| HU01O07w HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|AV911540.1| AV911540 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|AF069328.1| AF069328 Hordeum vulgare library (Park YB) Hor... 33.7 0.055 ALIGNMENTS >gb|CX629047.1| GCW001A03r GCW Hordeum vulgare cDNA clone GCW001A03 5-PRIME, mRNA sequence. Length=296 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGAG 23 ||||||||||||||||||||||| Sbjct 101 TCCACTATGGACTACATACGGAG 123 >gb|CA012080.1| HT04G07r HT Hordeum vulgare subsp. vulgare cDNA clone HT04G07 5-PRIME, mRNA sequence. Length=621 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGA 22 |||||||||||||||||||||| Sbjct 346 TCCACTATGGACTACATACGGA 367 >emb|AJ469590.1| AJ469590 S00008 Hordeum vulgare cDNA clone S0000800068D01F1, mRNA sequence. Length=480 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 CACTATGGACTACATACGGA 22 |||||||||||||||||||| Sbjct 297 CACTATGGACTACATACGGA 278 >dbj|BJ480160.1| BJ480160 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah55o06 5', mRNA sequence. Length=550 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 TCCACTATGGACTACATACGGAG 23 ||||||||||||||||||| ||| Sbjct 136 TCCACTATGGACTACATACAGAG 114 >gb|BU974512.1| HB28C13r BC Hordeum vulgare subsp. vulgare cDNA clone HB28C13 5-PRIME, mRNA sequence. Length=546 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGA 22 || ||||||||||||||||||| Sbjct 346 TCAACTATGGACTACATACGGA 367 >gb|EX594051.1| HDP32P11T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP32P11, mRNA sequence. Length=610 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CACTATGGACTACATACG 20 |||||||||||||||||| Sbjct 43 CACTATGGACTACATACG 26 >gb|EX581233.1| HDP22B24w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22B24, mRNA sequence. Length=526 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 3 CACTATGGACTACATACG 20 |||||||||||||||||| Sbjct 484 CACTATGGACTACATACG 501 >gb|EX581232.1| HDP22B24T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22B24, mRNA sequence. Length=485 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 3 CACTATGGACTACATACG 20 |||||||||||||||||| Sbjct 29 CACTATGGACTACATACG 12 >gb|CA013466.1| HT08I16r HT Hordeum vulgare subsp. vulgare cDNA clone HT08I16 5-PRIME, mRNA sequence. Length=597 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGAG 23 ||||||| ||||||||||| ||| Sbjct 413 TCCACTACGGACTACATACAGAG 435 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TCCACTATGGACTACATACGG 21 ||||||| ||||||||||||| Sbjct 498 TCCACTACGGACTACATACGG 478 >gb|CA012079.1| HT04G05r HT Hordeum vulgare subsp. vulgare cDNA clone HT04G05 5-PRIME, mRNA sequence. Length=532 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGAG 23 ||||||| |||||||||||||| Sbjct 73 TCCACTACAGACTACATACGGAG 95 >gb|BQ740191.1| HC111E05 HC Hordeum vulgare subsp. vulgare cDNA clone HC111E05, mRNA sequence. Length=608 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGAG 23 ||||||| | ||||||||||||| Sbjct 15 TCCACTACGTACTACATACGGAG 37 >gb|BQ663275.1| HU01O07w HU Hordeum vulgare subsp. vulgare cDNA clone HU01O07 3-PRIME, mRNA sequence. Length=482 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 CACTATGGACTACATACGGAG 23 || |||||||||||||||||| Sbjct 42 CATTATGGACTACATACGGAG 22 >dbj|AV911540.1| AV911540 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak13i01 3', mRNA sequence. Length=661 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 3 CACTATGGACTACATACGGAG 23 |||||||||||| |||||||| Sbjct 71 CACTATGGACTAAATACGGAG 51 >gb|AF069328.1| AF069328 Hordeum vulgare library (Park YB) Hordeum vulgare cDNA clone BLTI-2, mRNA sequence. Length=260 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TCCACTATGGACTACATACGGAG 23 |||||||| ||||| |||||||| Sbjct 144 TCCACTATAGACTAGATACGGAG 166 Query= tae-miR1133 MIMAT0005368 Length=22 Score E Sequences producing significant alignments: (Bits) Value gb|EX595629.1| HDP24G01T HDP Hordeum vulgare subsp. vulgare c... 41.0 4e-04 gb|EX575274.1| HDP18A14w HDP Hordeum vulgare subsp. vulgare c... 41.0 4e-04 gb|EX575273.1| HDP18A14T HDP Hordeum vulgare subsp. vulgare c... 41.0 4e-04 dbj|BY875862.1| BY875862 Germination shoots Hordeum vulgare s... 41.0 4e-04 dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv... 39.2 0.001 gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv... 39.2 0.001 gb|GH218255.1| HVSMEg0010H17r2 Hordeum vulgare pre-anthesis s... 35.6 0.016 gb|CK568133.1| HO09A05w HO Hordeum vulgare cDNA clone HO09A05... 35.6 0.016 gb|BE060539.3| HVSMEg0012J07f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|GH225521.1| HVSMEm0003G12r2 Hordeum vulgare green seedling... 33.7 0.055 gb|GH224188.1| HVSMEl0008E20r2 Hordeum vulgare spike (Fusariu... 33.7 0.055 gb|FD527254.1| RUS86E05w HZ Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX598525.1| HDP07G24w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX598524.1| HDP07G24T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX584248.1| HDP04P20w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX584247.1| HDP04P20T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX582390.1| HDP13P04w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX582389.1| HDP13P04T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575083.1| HDP18F06w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575082.1| HDP18F06T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX589385.1| HDP20E02w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX589384.1| HDP20E02T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX597992.1| HDP11G04T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX583701.1| HDP08P05w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX583700.1| HDP08P05T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX584438.1| HDP04L10w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX584437.1| HDP04L10T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581997.1| HDP17I08T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX587619.1| HDP29G02w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX587618.1| HDP29G02T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX590265.1| HDP12L23w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX590264.1| HDP12L23T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN0... 33.7 0.055 gb|DN155230.1| GCA005G08x GCA Hordeum vulgare cDNA clone GCA0... 33.7 0.055 gb|CB865150.1| HD08J17w HD Hordeum vulgare cDNA clone HD08J17... 33.7 0.055 gb|CB861063.1| HH03I10w HH Hordeum vulgare cDNA clone HH03I10... 33.7 0.055 dbj|BJ545549.1| BJ545549 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BU991944.1| HD08G04r HD Hordeum vulgare cDNA clone HD08G04... 33.7 0.055 gb|BM368614.2| EBem08_SQ004_B23_R embryo, 40 DPA, no treatmen... 33.7 0.055 gb|BQ465197.1| HU02O18r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ465876.1| BJ465876 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >gb|EX595629.1| HDP24G01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24G01, mRNA sequence. Length=472 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||||||| Sbjct 83 CATATACTCCCTCCGTCCGAAA 104 >gb|EX575274.1| HDP18A14w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18A14, mRNA sequence. Length=563 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||||||| Sbjct 510 CATATACTCCCTCCGTCCGAAA 489 >gb|EX575273.1| HDP18A14T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18A14, mRNA sequence. Length=545 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||||||| Sbjct 69 CATATACTCCCTCCGTCCGAAA 90 >dbj|BY875862.1| BY875862 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl26a08 3', mRNA sequence. Length=392 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||||||| Sbjct 24 CATATACTCCCTCCGTCCGAAA 45 >dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44n10 3', mRNA sequence. Length=726 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||||||| Sbjct 39 ATATACTCCCTCCGTCCGAAA 59 >gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDNA clone HA14J03 5-PRIME, mRNA sequence. Length=547 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||||||| Sbjct 461 ATATACTCCCTCCGTCCGAAA 441 >dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak4h20 3', mRNA sequence. Length=592 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||||||| Sbjct 34 ATATACTCCCTCCGTCCGAAA 54 >gb|GH218255.1| HVSMEg0010H17r2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0024C17f, mRNA sequence. Length=594 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||| ||| Sbjct 166 CATATACTCCCTCCGTCCCAAA 145 >gb|CK568133.1| HO09A05w HO Hordeum vulgare cDNA clone HO09A05 3-PRIME, mRNA sequence. Length=693 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||||| || Sbjct 120 CATATACTCCCTCCGTCCGGAA 141 >gb|BE060539.3| HVSMEg0012J07f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012J07f, mRNA sequence. Length=681 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 4 ATACTCCCTCCGTCCGAAA 22 ||||||||||||||||||| Sbjct 298 ATACTCCCTCCGTCCGAAA 316 >gb|GH225521.1| HVSMEm0003G12r2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0040I16f, mRNA sequence. Length=605 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 243 TACTCCCTCCGTCCGAAA 226 >gb|GH224188.1| HVSMEl0008E20r2 Hordeum vulgare spike (Fusarium infected) cDNA library HVSMEl (HVcDNA0012)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0037C12f, mRNA sequence. Length=668 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 247 TACTCCCTCCGTCCGAAA 230 >gb|FD527254.1| RUS86E05w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40L14, mRNA sequence. Length=691 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 655 ATATACTCCCTCCGTCCCAAA 675 >gb|EX598525.1| HDP07G24w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07G24, mRNA sequence. Length=500 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 410 ATATACTCCCTCCGTCCCAAA 390 >gb|EX598524.1| HDP07G24T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07G24, mRNA sequence. Length=467 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 86 ATATACTCCCTCCGTCCCAAA 106 >gb|EX584248.1| HDP04P20w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04P20, mRNA sequence. Length=506 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 338 ATATACTCCCTCCGTCCCAAA 358 >gb|EX584247.1| HDP04P20T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04P20, mRNA sequence. Length=471 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 164 ATATACTCCCTCCGTCCCAAA 144 >gb|EX582390.1| HDP13P04w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13P04, mRNA sequence. Length=592 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||| || Sbjct 251 ATATACTCCCTCCGTCCGGAA 271 >gb|EX582389.1| HDP13P04T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13P04, mRNA sequence. Length=676 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 |||||||||||||||||| || Sbjct 611 ATATACTCCCTCCGTCCGGAA 591 >gb|EX575083.1| HDP18F06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18F06, mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 374 TACTCCCTCCGTCCGAAA 391 >gb|EX575082.1| HDP18F06T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18F06, mRNA sequence. Length=564 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 216 TACTCCCTCCGTCCGAAA 199 >gb|EX589385.1| HDP20E02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP20E02, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 368 TACTCCCTCCGTCCGAAA 385 >gb|EX589384.1| HDP20E02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP20E02, mRNA sequence. Length=534 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 239 TACTCCCTCCGTCCGAAA 222 >gb|EX597992.1| HDP11G04T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11G04, mRNA sequence. Length=487 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 66 TACTCCCTCCGTCCGAAA 49 >gb|EX583701.1| HDP08P05w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08P05, mRNA sequence. Length=673 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 495 ATATACTCCCTCCGTCCCAAA 515 >gb|EX583700.1| HDP08P05T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08P05, mRNA sequence. Length=655 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 161 ATATACTCCCTCCGTCCCAAA 141 >gb|EX584438.1| HDP04L10w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04L10, mRNA sequence. Length=632 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 |||||||||||| |||||||| Sbjct 519 ATATACTCCCTCTGTCCGAAA 499 >gb|EX584437.1| HDP04L10T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04L10, mRNA sequence. Length=603 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 |||||||||||| |||||||| Sbjct 115 ATATACTCCCTCTGTCCGAAA 135 >gb|EX581997.1| HDP17I08T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP17I08, mRNA sequence. Length=564 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 70 TACTCCCTCCGTCCGAAA 53 >gb|EX587619.1| HDP29G02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP29G02, mRNA sequence. Length=563 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 348 ATATACTCCCTCCGTCCCAAA 368 >gb|EX587618.1| HDP29G02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP29G02, mRNA sequence. Length=586 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 272 ATATACTCCCTCCGTCCCAAA 252 >gb|EX590265.1| HDP12L23w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L23, mRNA sequence. Length=650 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 495 ATATACTCCCTCCGTCCCAAA 515 >gb|EX590264.1| HDP12L23T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L23, mRNA sequence. Length=598 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 104 ATATACTCCCTCCGTCCCAAA 84 >gb|DN159362.1| GPN004K19u GPN Hordeum vulgare cDNA clone GPN004K19 3-PRIME, mRNA sequence. Length=559 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 CATATACTCCCTCCGTCC 18 |||||||||||||||||| Sbjct 479 CATATACTCCCTCCGTCC 496 >gb|DN155230.1| GCA005G08x GCA Hordeum vulgare cDNA clone GCA005G08 3-PRIME, mRNA sequence. Length=237 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||| ||||||||||| Sbjct 207 ATATACTCCTTCCGTCCGAAA 227 >gb|CB865150.1| HD08J17w HD Hordeum vulgare cDNA clone HD08J17 3-PRIME, mRNA sequence. Length=558 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 11 TACTCCCTCCGTCCGAAA 28 >gb|CB861063.1| HH03I10w HH Hordeum vulgare cDNA clone HH03I10 5-PRIME, mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 ||||||||||||||||| ||| Sbjct 481 ATATACTCCCTCCGTCCCAAA 501 >dbj|BJ545549.1| BJ545549 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak18b17 3', mRNA sequence. Length=660 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CATATACT-CCCTCCGTCCGAAA 22 |||||||| |||||||||||||| Sbjct 26 CATATACTNCCCTCCGTCCGAAA 48 >gb|BU991944.1| HD08G04r HD Hordeum vulgare cDNA clone HD08G04 5-PRIME, mRNA sequence. Length=635 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 CATATACTCCCTCCGTCC 18 |||||||||||||||||| Sbjct 191 CATATACTCCCTCCGTCC 174 >gb|BM368614.2| EBem08_SQ004_B23_R embryo, 40 DPA, no treatment, cv Optic, EBem08 Hordeum vulgare subsp. vulgare cDNA clone EBem08_SQ004_B23 5', mRNA sequence. Length=620 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 329 TACTCCCTCCGTCCGAAA 346 >gb|BQ465197.1| HU02O18r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O18 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 ATATACTCCCTCCGTCCGAAA 22 || |||||||||||||||||| Sbjct 43 ATGTACTCCCTCCGTCCGAAA 63 >dbj|BJ465876.1| BJ465876 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags27l14 3', mRNA sequence. Length=231 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 TACTCCCTCCGTCCGAAA 22 |||||||||||||||||| Sbjct 156 TACTCCCTCCGTCCGAAA 139 Query= tae-miR1128 MIMAT0005363 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|GH225521.1| HVSMEm0003G12r2 Hordeum vulgare green seedling... 33.7 0.055 gb|GH224188.1| HVSMEl0008E20r2 Hordeum vulgare spike (Fusariu... 33.7 0.055 gb|GH217363.1| HVSMEg0005M24r2 Hordeum vulgare pre-anthesis s... 33.7 0.055 gb|FD523856.1| RUS68E11w HF Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|EX595629.1| HDP24G01T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575438.1| HDP14M02w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575274.1| HDP18A14w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575273.1| HDP18A14T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575083.1| HDP18F06w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX575082.1| HDP18F06T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX589385.1| HDP20E02w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX589384.1| HDP20E02T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX597992.1| HDP11G04T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581997.1| HDP17I08T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX581151.1| HDP22E03T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY858979.1| BY858979 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY875862.1| BY875862 Germination shoots Hordeum vulgare s... 33.7 0.055 dbj|BY874640.1| BY874640 Germination shoots Hordeum vulgare s... 33.7 0.055 gb|DN160816.1| GW003I05f GW Hordeum vulgare cDNA clone GW003I... 33.7 0.055 gb|CX628102.1| GBN007E09u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|CX627027.1| GAN009C09u GAN Hordeum vulgare cDNA clone GAN0... 33.7 0.055 gb|CV062707.1| BNEL82a9 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CB871794.1| HC05E13y CH Hordeum vulgare cDNA clone HC05E13... 33.7 0.055 gb|CB865150.1| HD08J17w HD Hordeum vulgare cDNA clone HD08J17... 33.7 0.055 dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BM368614.2| EBem08_SQ004_B23_R embryo, 40 DPA, no treatmen... 33.7 0.055 gb|BQ465197.1| HU02O18r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ473839.1| BJ473839 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ465876.1| BJ465876 K. Sato unpublished cDNA library, cv... 33.7 0.055 emb|AJ436472.1| AJ436472 S00007 Hordeum vulgare cDNA clone S0... 33.7 0.055 dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BE060539.3| HVSMEg0012J07f Hordeum vulgare pre-anthesis sp... 33.7 0.055 gb|BI954805.1| HVSMEm0019N18f Hordeum vulgare green seedling ... 33.7 0.055 ALIGNMENTS >gb|GH225521.1| HVSMEm0003G12r2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0040I16f, mRNA sequence. Length=605 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 243 TACTCCCTCCGTCCGAAA 226 >gb|GH224188.1| HVSMEl0008E20r2 Hordeum vulgare spike (Fusarium infected) cDNA library HVSMEl (HVcDNA0012)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0037C12f, mRNA sequence. Length=668 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 247 TACTCCCTCCGTCCGAAA 230 >gb|GH217363.1| HVSMEg0005M24r2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0022J05f, mRNA sequence. Length=498 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 188 TACTACTCCCTCCGTCCGGAA 208 >gb|FD523856.1| RUS68E11w HF Hordeum vulgare subsp. vulgare cDNA clone HF14N12, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 165 TACTACTCCCTCCGTCCGGAA 185 >gb|EX595629.1| HDP24G01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24G01, mRNA sequence. Length=472 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 87 TACTCCCTCCGTCCGAAA 104 >gb|EX575438.1| HDP14M02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14M02, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 427 TACTACTCCCTCCGTCCCAAA 407 >gb|EX575274.1| HDP18A14w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18A14, mRNA sequence. Length=563 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 506 TACTCCCTCCGTCCGAAA 489 >gb|EX575273.1| HDP18A14T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18A14, mRNA sequence. Length=545 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 73 TACTCCCTCCGTCCGAAA 90 >gb|EX575083.1| HDP18F06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18F06, mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 374 TACTCCCTCCGTCCGAAA 391 >gb|EX575082.1| HDP18F06T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18F06, mRNA sequence. Length=564 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 216 TACTCCCTCCGTCCGAAA 199 >gb|EX589385.1| HDP20E02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP20E02, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 368 TACTCCCTCCGTCCGAAA 385 >gb|EX589384.1| HDP20E02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP20E02, mRNA sequence. Length=534 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 239 TACTCCCTCCGTCCGAAA 222 >gb|EX597992.1| HDP11G04T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11G04, mRNA sequence. Length=487 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 66 TACTCCCTCCGTCCGAAA 49 >gb|EX581997.1| HDP17I08T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP17I08, mRNA sequence. Length=564 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 70 TACTCCCTCCGTCCGAAA 53 >gb|EX581151.1| HDP22E03T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22E03, mRNA sequence. Length=601 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 48 TACTACTCCCTCCGTCCCAAA 68 >dbj|BY858979.1| BY858979 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet112e10 3', mRNA sequence. Length=353 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 71 TACTACTCCCTCCGTCCGGAA 51 >dbj|BY875862.1| BY875862 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl26a08 3', mRNA sequence. Length=392 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 28 TACTCCCTCCGTCCGAAA 45 >dbj|BY874640.1| BY874640 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl06b05 3', mRNA sequence. Length=271 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 166 TACTACTCCCTCCGTCCTAAA 186 >gb|DN160816.1| GW003I05f GW Hordeum vulgare cDNA clone GW003I05 3-PRIME, mRNA sequence. Length=498 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 411 TACTACTCCCTCCGTCCCAAA 391 >gb|CX628102.1| GBN007E09u GBN Hordeum vulgare cDNA clone GBN007E09 3-PRIME, mRNA sequence. Length=417 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 294 TACTACTCCCTCCGTCCGGAA 274 >gb|CX627027.1| GAN009C09u GAN Hordeum vulgare cDNA clone GAN009C09 3-PRIME, mRNA sequence. Length=507 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 136 TACTACTCCCTCCGTCCGGAA 156 >gb|CV062707.1| BNEL82a9 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL82a9 5' similar to Unknown Function, mRNA sequence. Length=579 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 |||||||||||||||||| || Sbjct 193 TACTACTCCCTCCGTCCGGAA 173 >gb|CB871794.1| HC05E13y CH Hordeum vulgare cDNA clone HC05E13 3-PRIME, mRNA sequence. Length=315 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 175 TACTACTCCCTCCGTCCTAAA 195 >gb|CB865150.1| HD08J17w HD Hordeum vulgare cDNA clone HD08J17 3-PRIME, mRNA sequence. Length=558 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 11 TACTCCCTCCGTCCGAAA 28 >dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44n10 3', mRNA sequence. Length=726 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 42 TACTCCCTCCGTCCGAAA 59 >gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDNA clone HA14J03 5-PRIME, mRNA sequence. Length=547 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 458 TACTCCCTCCGTCCGAAA 441 >gb|BM368614.2| EBem08_SQ004_B23_R embryo, 40 DPA, no treatment, cv Optic, EBem08 Hordeum vulgare subsp. vulgare cDNA clone EBem08_SQ004_B23 5', mRNA sequence. Length=620 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 329 TACTCCCTCCGTCCGAAA 346 >gb|BQ465197.1| HU02O18r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O18 5-PRIME, mRNA sequence. Length=647 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 46 TACTCCCTCCGTCCGAAA 63 >dbj|BJ473839.1| BJ473839 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal17e12 3', mRNA sequence. Length=636 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 91 TACTACTCCCTCCGTCCCAAA 111 >dbj|BJ465876.1| BJ465876 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags27l14 3', mRNA sequence. Length=231 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 156 TACTCCCTCCGTCCGAAA 139 >emb|AJ436472.1| AJ436472 S00007 Hordeum vulgare cDNA clone S0000700019C03F1, mRNA sequence. Length=612 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 TACTACTCCCTCCGTCCGAAA 21 ||||||||||||||||| ||| Sbjct 535 TACTACTCCCTCCGTCCCAAA 515 >dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak4h20 3', mRNA sequence. Length=592 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 37 TACTCCCTCCGTCCGAAA 54 >gb|BE060539.3| HVSMEg0012J07f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0012J07f, mRNA sequence. Length=681 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 4 TACTCCCTCCGTCCGAAA 21 |||||||||||||||||| Sbjct 299 TACTCCCTCCGTCCGAAA 316 >gb|BI954805.1| HVSMEm0019N18f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0019N18f, mRNA sequence. Length=670 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TACTACTCCCTCCGTCCG 18 |||||||||||||||||| Sbjct 352 TACTACTCCCTCCGTCCG 369 Query= tae-miR1119 MIMAT0005354 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|GH227471.1| HVSMEn0006I14f2 Hordeum vulgare rachis cDNA li... 35.6 0.016 gb|GH228802.1| HVSMEn0024A18f2 Hordeum vulgare rachis cDNA li... 35.6 0.016 gb|GH223038.1| HVSMEk0019I02r2 Hordeum vulgare testa/pericarp... 35.6 0.016 gb|GH223037.1| HVSMEk0019I02f2 Hordeum vulgare testa/pericarp... 35.6 0.016 gb|FD527818.1| RUS108C09w HZ Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|FD525832.1| RUS81B06w HZ Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|FD525157.1| RUS119B11r HY Hordeum vulgare subsp. vulgare c... 35.6 0.016 dbj|BY874148.1| BY874148 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY864489.1| BY864489 Etiolated seedling shoot Hordeum vul... 35.6 0.016 dbj|BY873820.1| BY873820 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY873695.1| BY873695 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY872818.1| BY872818 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY861857.1| BY861857 Etiolated seedling shoot Hordeum vul... 35.6 0.016 dbj|BY870666.1| BY870666 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY860649.1| BY860649 Etiolated seedling shoot Hordeum vul... 35.6 0.016 gb|CB881890.1| HM11D07w HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB880638.1| HM07D17w HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB880289.1| HM06B10w HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB876132.1| HX10G03w HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB875296.1| HX07N22w HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB874935.1| HX06M09w HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB874734.1| HX06C16w HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB874459.1| HX05F09w HX Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB874191.1| HC15F02y CH Hordeum vulgare cDNA clone HC15F02... 35.6 0.016 gb|CB874075.1| HC14M13y CH Hordeum vulgare cDNA clone HC14M13... 35.6 0.016 gb|CB872600.1| HC08L01y CH Hordeum vulgare cDNA clone HC08L01... 35.6 0.016 gb|CB872453.1| HC08B02y CH Hordeum vulgare cDNA clone HC08B02... 35.6 0.016 gb|CB872284.1| HC07E24y CH Hordeum vulgare cDNA clone HC07E24... 35.6 0.016 gb|CB872255.1| HC07C23y CH Hordeum vulgare cDNA clone HC07C23... 35.6 0.016 gb|CB872108.1| HC06J20y CH Hordeum vulgare cDNA clone HC06J20... 35.6 0.016 gb|CB871762.1| HC05C10y CH Hordeum vulgare cDNA clone HC05C10... 35.6 0.016 gb|CB871755.1| HC05B20y CH Hordeum vulgare cDNA clone HC05B20... 35.6 0.016 gb|CB870604.1| HC14M13w CH Hordeum vulgare cDNA clone HC14M13... 35.6 0.016 gb|CB868554.1| HC08L01w CH Hordeum vulgare cDNA clone HC08L01... 35.6 0.016 gb|CB868369.1| HC08B02w CH Hordeum vulgare cDNA clone HC08B02... 35.6 0.016 gb|CB867081.1| HC05B20w CH Hordeum vulgare cDNA clone HC05B20... 35.6 0.016 gb|CB866608.1| HC06J20w CH Hordeum vulgare cDNA clone HC06J20... 35.6 0.016 gb|CB859747.1| HI11H14w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB858914.1| HI08L06w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB858768.1| HI08E06w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB858345.1| HI06K22w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CB858181.1| HI06B04w HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA029265.1| HZ64L08r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA028720.1| HZ63A23r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA027359.1| HZ58K18r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA027063.1| HZ57M15r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA026736.1| HZ56M20r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA025269.1| HZ51K12r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA020594.1| HZ36M15r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA018933.1| HV10C04r HV Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA018263.1| HV08B20r HV Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA017073.1| HV14P12u HV Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|CA016083.1| HV10C04u HV Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU994188.1| HM06B10r HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU993977.1| HM05D17r HM Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU986680.1| HF12J17r HF Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU975947.1| HB32M19r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU975470.1| HB31D16r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU973972.1| HB26I11r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU973892.1| HB26E15r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU973607.1| HB25H07r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU971666.1| HB19E20r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU970318.1| HB14E13r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ761269.1| EBro04_SQ004_O20_R root, 3 week, salt-stressed... 35.6 0.016 gb|BQ761024.1| EBro04_SQ001_A19_R root, 3 week, salt-stressed... 35.6 0.016 gb|BQ760313.1| EBpi07_SQ003_K23_R pistil, 12 DPA, no treatmen... 35.6 0.016 gb|BQ756701.1| EBem09_SQ003_I04_R embryo, 1 Day germination, ... 35.6 0.016 gb|BQ756674.1| EBem09_SQ003_G20_R embryo, 1 Day germination, ... 35.6 0.016 gb|BI776713.2| EBpi07_SQ001_I08_R pistil, 12 DPA, no treatmen... 35.6 0.016 gb|BI776712.2| EBpi07_SQ001_I07_R pistil, 12 DPA, no treatmen... 35.6 0.016 gb|BI776941.2| EBpi03_SQ001_H03_R pistil, 4 DPA, no treatment... 35.6 0.016 gb|BM441507.2| EBma05_SQ004_J19_R maternal, 12 DPA, no treatm... 35.6 0.016 gb|BM372872.2| EBma04_SQ002_D19_R maternal, 10 DPA, no treatm... 35.6 0.016 gb|BM372821.2| EBma04_SQ002_A17_R maternal, 10 DPA, no treatm... 35.6 0.016 gb|BM096529.2| EBma03_SQ001_N21_R maternal, 8 DPA, no treatme... 35.6 0.016 gb|BM096491.2| EBma03_SQ001_I16_R maternal, 8 DPA, no treatme... 35.6 0.016 gb|BI781077.2| EBma03_SQ001_F16_R maternal, 8 DPA, no treatme... 35.6 0.016 gb|BM443814.2| EBem09_SQ001_J12_R embryo, 1 Day germination, ... 35.6 0.016 gb|BQ665864.1| HZ01G07u HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ661979.1| HR01B10u HR Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ660599.1| HI04G17u HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ660575.1| HI04E14u HI Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ134689.1| LP30176 Lemma/palea-enriched cDNA library from... 35.6 0.016 gb|BQ467836.1| HR01B10r HR Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BQ462148.1| HD02D04r HD Hordeum vulgare cDNA clone HD02D04... 35.6 0.016 emb|AJ486203.1| AJ486203 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 emb|AJ486202.1| AJ486202 S00011 Hordeum vulgare cDNA clone S0... 35.6 0.016 gb|BM445267.1| EBem09_SQ007_O13_R embryo, 1 Day germination, ... 35.6 0.016 gb|BM444358.1| EBem09_SQ004_O18_R embryo, 1 Day germination, ... 35.6 0.016 gb|BM444122.1| EBem09_SQ004_D15_R embryo, 1 Day germination, ... 35.6 0.016 gb|BM443806.1| EBem09_SQ001_J04_R embryo, 1 Day germination, ... 35.6 0.016 gb|BM443638.1| EBem09_SQ001_A02_R embryo, 1 Day germination, ... 35.6 0.016 gb|BG343309.2| HVSMEg0005G02f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|BG342907.2| HVSMEg0001D13f Hordeum vulgare pre-anthesis sp... 35.6 0.016 gb|BI960270.1| HVSMEn0024A18f Hordeum vulgare rachis EST libr... 35.6 0.016 gb|BI959664.1| HVSMEn0020K17f Hordeum vulgare rachis EST libr... 35.6 0.016 gb|BI959039.1| HVSMEn0017O01f Hordeum vulgare rachis EST libr... 35.6 0.016 gb|BI946902.1| HVSMEl0002L18f Hordeum vulgare spike EST libra... 35.6 0.016 gb|BI776735.1| EBpi07_SQ001_J13_R pistil, 12 DPA, no treatmen... 35.6 0.016 gb|BG417782.1| HVSMEk0019I02f Hordeum vulgare testa/pericarp ... 35.6 0.016 gb|BE602255.2| HVSMEh0098D18f Hordeum vulgare 5-45 DAP spike ... 35.6 0.016 emb|AL508350.1| AL508350 Hordeum vulgare Barke developing car... 35.6 0.016 emb|AL505469.1| AL505469 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 emb|AL504115.1| AL504115 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 emb|AL503002.1| AL503002 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 emb|AL502875.1| AL502875 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 emb|AL501654.1| AL501654 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 emb|AL501165.1| AL501165 Hordeum vulgare Barke roots Hordeum ... 35.6 0.016 gb|BE413256.1| MCG013.C01R990625 ITEC MCG Barley Leaf/Culm Li... 35.6 0.016 gb|CB858500.1| HI07E08w HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU967368.1| HB04B10r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|GH227471.1| HVSMEn0006I14f2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0044B14r, mRNA sequence. Length=505 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 244 TGGCACGGCGCGATGCTCAGTCAG 221 >gb|GH228802.1| HVSMEn0024A18f2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0048C22r, mRNA sequence. Length=280 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 186 TGGCACGGCGCGATGCTCAGTCAG 209 >gb|GH223038.1| HVSMEk0019I02r2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0035G21f, mRNA sequence. Length=374 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 306 TGGCACGGCGCGATGCTCAGTCAG 283 >gb|GH223037.1| HVSMEk0019I02f2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0035G21r, mRNA sequence. Length=374 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 69 TGGCACGGCGCGATGCTCAGTCAG 92 >gb|FD527818.1| RUS108C09w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62B24, mRNA sequence. Length=518 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 264 TGGCACGGCGCGATGCTCAGTCAG 241 >gb|FD525832.1| RUS81B06w HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G07, mRNA sequence. Length=626 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 258 TGGCACGGCGCGATGCTCAGTCAG 235 >gb|FD525157.1| RUS119B11r HY Hordeum vulgare subsp. vulgare cDNA clone HY08I02, mRNA sequence. Length=436 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 289 TGGCACGGCGCGATGCTCAGTCAG 312 >dbj|BY874148.1| BY874148 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast79e12 3', mRNA sequence. Length=350 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >dbj|BY864489.1| BY864489 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet73d08 3', mRNA sequence. Length=409 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 296 TGGCACGGCGCGATGCTCAGTCAG 273 >dbj|BY873820.1| BY873820 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast74h09 3', mRNA sequence. Length=367 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 267 TGGCACGGCGCGATGCTCAGTCAG 244 >dbj|BY873695.1| BY873695 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast73b11 3', mRNA sequence. Length=326 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 300 TGGCACGGCGCGATGCTCAGTCAG 277 >dbj|BY872818.1| BY872818 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast57f04 3', mRNA sequence. Length=336 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 269 TGGCACGGCGCGATGCTCAGTCAG 246 >dbj|BY861857.1| BY861857 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet38d01 3', mRNA sequence. Length=445 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >dbj|BY870666.1| BY870666 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast13b03 3', mRNA sequence. Length=349 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 292 TGGCACGGCGCGATGCTCAGTCAG 269 >dbj|BY860649.1| BY860649 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet21h03 3', mRNA sequence. Length=330 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 298 TGGCACGGCGCGATGCTCAGTCAG 275 >gb|CB881890.1| HM11D07w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D07 3-PRIME, mRNA sequence. Length=547 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 297 TGGCACGGCGCGATGCTCAGTCAG 274 >gb|CB880638.1| HM07D17w HM Hordeum vulgare subsp. vulgare cDNA clone HM07D17 3-PRIME, mRNA sequence. Length=347 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 290 TGGCACGGCGCGATGCTCAGTCAG 267 >gb|CB880289.1| HM06B10w HM Hordeum vulgare subsp. vulgare cDNA clone HM06B10 3-PRIME, mRNA sequence. Length=402 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 297 TGGCACGGCGCGATGCTCAGTCAG 274 >gb|CB876132.1| HX10G03w HX Hordeum vulgare subsp. vulgare cDNA clone HX10G03 3-PRIME, mRNA sequence. Length=433 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 323 TGGCACGGCGCGATGCTCAGTCAG 300 >gb|CB875296.1| HX07N22w HX Hordeum vulgare subsp. vulgare cDNA clone HX07N22 3-PRIME, mRNA sequence. Length=573 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 297 TGGCACGGCGCGATGCTCAGTCAG 274 >gb|CB874935.1| HX06M09w HX Hordeum vulgare subsp. vulgare cDNA clone HX06M09 3-PRIME, mRNA sequence. Length=462 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|CB874734.1| HX06C16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C16 3-PRIME, mRNA sequence. Length=590 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 290 TGGCACGGCGCGATGCTCAGTCAG 267 >gb|CB874459.1| HX05F09w HX Hordeum vulgare subsp. vulgare cDNA clone HX05F09 3-PRIME, mRNA sequence. Length=591 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 297 TGGCACGGCGCGATGCTCAGTCAG 274 >gb|CB874191.1| HC15F02y CH Hordeum vulgare cDNA clone HC15F02 3-PRIME, mRNA sequence. Length=359 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 68 TGGCACGGCGCGATGCTCAGTCAG 91 >gb|CB874075.1| HC14M13y CH Hordeum vulgare cDNA clone HC14M13 3-PRIME, mRNA sequence. Length=359 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 66 TGGCACGGCGCGATGCTCAGTCAG 89 >gb|CB872600.1| HC08L01y CH Hordeum vulgare cDNA clone HC08L01 3-PRIME, mRNA sequence. Length=635 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 524 TGGCACGGCGCGATGCTCAGTCAG 547 >gb|CB872453.1| HC08B02y CH Hordeum vulgare cDNA clone HC08B02 3-PRIME, mRNA sequence. Length=337 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 303 TGGCACGGCGCGATGCTCAGTCAG 280 >gb|CB872284.1| HC07E24y CH Hordeum vulgare cDNA clone HC07E24 3-PRIME, mRNA sequence. Length=535 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 53 TGGCACGGCGCGATGCTCAGTCAG 76 >gb|CB872255.1| HC07C23y CH Hordeum vulgare cDNA clone HC07C23 3-PRIME, mRNA sequence. Length=329 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 52 TGGCACGGCGCGATGCTCAGTCAG 75 >gb|CB872108.1| HC06J20y CH Hordeum vulgare cDNA clone HC06J20 3-PRIME, mRNA sequence. Length=361 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 293 TGGCACGGCGCGATGCTCAGTCAG 270 >gb|CB871762.1| HC05C10y CH Hordeum vulgare cDNA clone HC05C10 3-PRIME, mRNA sequence. Length=626 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 53 TGGCACGGCGCGATGCTCAGTCAG 76 >gb|CB871755.1| HC05B20y CH Hordeum vulgare cDNA clone HC05B20 3-PRIME, mRNA sequence. Length=373 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 52 TGGCACGGCGCGATGCTCAGTCAG 75 >gb|CB870604.1| HC14M13w CH Hordeum vulgare cDNA clone HC14M13 5-PRIME, mRNA sequence. Length=347 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 293 TGGCACGGCGCGATGCTCAGTCAG 270 >gb|CB868554.1| HC08L01w CH Hordeum vulgare cDNA clone HC08L01 5-PRIME, mRNA sequence. Length=588 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 294 TGGCACGGCGCGATGCTCAGTCAG 271 >gb|CB868369.1| HC08B02w CH Hordeum vulgare cDNA clone HC08B02 5-PRIME, mRNA sequence. Length=359 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 54 TGGCACGGCGCGATGCTCAGTCAG 77 >gb|CB867081.1| HC05B20w CH Hordeum vulgare cDNA clone HC05B20 5-PRIME, mRNA sequence. Length=370 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 317 TGGCACGGCGCGATGCTCAGTCAG 294 >gb|CB866608.1| HC06J20w CH Hordeum vulgare cDNA clone HC06J20 5-PRIME, mRNA sequence. Length=303 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 15 TGGCACGGCGCGATGCTCAGTCAG 38 >gb|CB859747.1| HI11H14w HI Hordeum vulgare subsp. vulgare cDNA clone HI11H14 3-PRIME, mRNA sequence. Length=465 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 298 TGGCACGGCGCGATGCTCAGTCAG 275 >gb|CB858914.1| HI08L06w HI Hordeum vulgare subsp. vulgare cDNA clone HI08L06 3-PRIME, mRNA sequence. Length=492 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|CB858768.1| HI08E06w HI Hordeum vulgare subsp. vulgare cDNA clone HI08E06 3-PRIME, mRNA sequence. Length=508 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 399 TGGCACGGCGCGATGCTCAGTCAG 376 >gb|CB858345.1| HI06K22w HI Hordeum vulgare subsp. vulgare cDNA clone HI06K22 3-PRIME, mRNA sequence. Length=425 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|CB858181.1| HI06B04w HI Hordeum vulgare subsp. vulgare cDNA clone HI06B04 3-PRIME, mRNA sequence. Length=531 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|CA029265.1| HZ64L08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64L08 5-PRIME, mRNA sequence. Length=244 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 161 TGGCACGGCGCGATGCTCAGTCAG 184 >gb|CA028720.1| HZ63A23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63A23 5-PRIME, mRNA sequence. Length=169 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 139 TGGCACGGCGCGATGCTCAGTCAG 162 >gb|CA027359.1| HZ58K18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58K18 5-PRIME, mRNA sequence. Length=409 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 171 TGGCACGGCGCGATGCTCAGTCAG 194 >gb|CA027063.1| HZ57M15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57M15 5-PRIME, mRNA sequence. Length=306 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 216 TGGCACGGCGCGATGCTCAGTCAG 239 >gb|CA026736.1| HZ56M20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56M20 5-PRIME, mRNA sequence. Length=258 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 196 TGGCACGGCGCGATGCTCAGTCAG 219 >gb|CA025269.1| HZ51K12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51K12 5-PRIME, mRNA sequence. Length=302 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 12 TGGCACGGCGCGATGCTCAGTCAG 35 >gb|CA020594.1| HZ36M15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36M15 5-PRIME, mRNA sequence. Length=443 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 118 TGGCACGGCGCGATGCTCAGTCAG 141 >gb|CA018933.1| HV10C04r HV Hordeum vulgare subsp. vulgare cDNA clone HV10C04 5-PRIME, mRNA sequence. Length=463 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 173 TGGCACGGCGCGATGCTCAGTCAG 196 >gb|CA018263.1| HV08B20r HV Hordeum vulgare subsp. vulgare cDNA clone HV08B20 5-PRIME, mRNA sequence. Length=312 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 234 TGGCACGGCGCGATGCTCAGTCAG 257 >gb|CA017073.1| HV14P12u HV Hordeum vulgare subsp. vulgare cDNA clone HV14P12 3-PRIME, mRNA sequence. Length=424 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 262 TGGCACGGCGCGATGCTCAGTCAG 239 >gb|CA016083.1| HV10C04u HV Hordeum vulgare subsp. vulgare cDNA clone HV10C04 3-PRIME, mRNA sequence. Length=484 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 311 TGGCACGGCGCGATGCTCAGTCAG 288 >gb|BU994188.1| HM06B10r HM Hordeum vulgare subsp. vulgare cDNA clone HM06B10 5-PRIME, mRNA sequence. Length=402 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 107 TGGCACGGCGCGATGCTCAGTCAG 130 >gb|BU993977.1| HM05D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM05D17 5-PRIME, mRNA sequence. Length=349 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 60 TGGCACGGCGCGATGCTCAGTCAG 83 >gb|BU986680.1| HF12J17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12J17 5-PRIME, mRNA sequence. Length=294 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 19 TGGCACGGCGCGATGCTCAGTCAG 42 >gb|BU975947.1| HB32M19r BC Hordeum vulgare subsp. vulgare cDNA clone HB32M19 5-PRIME, mRNA sequence. Length=313 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 24 TGGCACGGCGCGATGCTCAGTCAG 47 >gb|BU975470.1| HB31D16r BC Hordeum vulgare subsp. vulgare cDNA clone HB31D16 5-PRIME, mRNA sequence. Length=313 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 24 TGGCACGGCGCGATGCTCAGTCAG 47 >gb|BU973972.1| HB26I11r BC Hordeum vulgare subsp. vulgare cDNA clone HB26I11 5-PRIME, mRNA sequence. Length=326 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 36 TGGCACGGCGCGATGCTCAGTCAG 59 >gb|BU973892.1| HB26E15r BC Hordeum vulgare subsp. vulgare cDNA clone HB26E15 5-PRIME, mRNA sequence. Length=379 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 156 TGGCACGGCGCGATGCTCAGTCAG 179 >gb|BU973607.1| HB25H07r BC Hordeum vulgare subsp. vulgare cDNA clone HB25H07 5-PRIME, mRNA sequence. Length=307 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 17 TGGCACGGCGCGATGCTCAGTCAG 40 >gb|BU971666.1| HB19E20r BC Hordeum vulgare subsp. vulgare cDNA clone HB19E20 5-PRIME, mRNA sequence. Length=308 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 19 TGGCACGGCGCGATGCTCAGTCAG 42 >gb|BU970318.1| HB14E13r BC Hordeum vulgare subsp. vulgare cDNA clone HB14E13 5-PRIME, mRNA sequence. Length=315 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 20 TGGCACGGCGCGATGCTCAGTCAG 43 >gb|BQ761269.1| EBro04_SQ004_O20_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ004_O20 5', mRNA sequence. Length=308 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BQ761024.1| EBro04_SQ001_A19_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ001_A19 5', mRNA sequence. Length=113 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 43 TGGCACGGCGCGATGCTCAGTCAG 66 >gb|BQ760313.1| EBpi07_SQ003_K23_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ003_K23 5', mRNA sequence. Length=190 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 123 TGGCACGGCGCGATGCTCAGTCAG 100 >gb|BQ756701.1| EBem09_SQ003_I04_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ003_I04 5', mRNA sequence. Length=369 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 302 TGGCACGGCGCGATGCTCAGTCAG 279 >gb|BQ756674.1| EBem09_SQ003_G20_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ003_G20 5', mRNA sequence. Length=170 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 44 TGGCACGGCGCGATGCTCAGTCAG 67 >gb|BI776713.2| EBpi07_SQ001_I08_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ001_I08 5', mRNA sequence. Length=358 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BI776712.2| EBpi07_SQ001_I07_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ001_I07 5', mRNA sequence. Length=358 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BI776941.2| EBpi03_SQ001_H03_R pistil, 4 DPA, no treatment, cv Optic, EBpi03 Hordeum vulgare subsp. vulgare cDNA clone EBpi03_SQ001_H03 5', mRNA sequence. Length=234 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 73 TGGCACGGCGCGATGCTCAGTCAG 96 >gb|BM441507.2| EBma05_SQ004_J19_R maternal, 12 DPA, no treatment, cv Optic, EBma05 Hordeum vulgare subsp. vulgare cDNA clone EBma05_SQ004_J19 5', mRNA sequence. Length=389 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 322 TGGCACGGCGCGATGCTCAGTCAG 299 >gb|BM372872.2| EBma04_SQ002_D19_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_D19 5', mRNA sequence. Length=363 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 296 TGGCACGGCGCGATGCTCAGTCAG 273 >gb|BM372821.2| EBma04_SQ002_A17_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_A17 5', mRNA sequence. Length=331 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 290 TGGCACGGCGCGATGCTCAGTCAG 267 >gb|BM096529.2| EBma03_SQ001_N21_R maternal, 8 DPA, no treatment, cv Optic, EBma03 Hordeum vulgare subsp. vulgare cDNA clone EBma03_SQ001_N21 5', mRNA sequence. Length=379 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 312 TGGCACGGCGCGATGCTCAGTCAG 289 >gb|BM096491.2| EBma03_SQ001_I16_R maternal, 8 DPA, no treatment, cv Optic, EBma03 Hordeum vulgare subsp. vulgare cDNA clone EBma03_SQ001_I16 5', mRNA sequence. Length=357 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 290 TGGCACGGCGCGATGCTCAGTCAG 267 >gb|BI781077.2| EBma03_SQ001_F16_R maternal, 8 DPA, no treatment, cv Optic, EBma03 Hordeum vulgare subsp. vulgare cDNA clone EBma03_SQ001_F16 5', mRNA sequence. Length=394 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 242 TGGCACGGCGCGATGCTCAGTCAG 219 >gb|BM443814.2| EBem09_SQ001_J12_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ001_J12 5', mRNA sequence. Length=318 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BQ665864.1| HZ01G07u HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G07 3-PRIME, mRNA sequence. Length=401 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 271 TGGCACGGCGCGATGCTCAGTCAG 248 >gb|BQ661979.1| HR01B10u HR Hordeum vulgare subsp. vulgare cDNA clone HR01B10 3-PRIME, mRNA sequence. Length=321 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BQ660599.1| HI04G17u HI Hordeum vulgare subsp. vulgare cDNA clone HI04G17 3-PRIME, mRNA sequence. Length=417 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 290 TGGCACGGCGCGATGCTCAGTCAG 267 >gb|BQ660575.1| HI04E14u HI Hordeum vulgare subsp. vulgare cDNA clone HI04E14 3-PRIME, mRNA sequence. Length=348 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 295 TGGCACGGCGCGATGCTCAGTCAG 272 >gb|BQ134689.1| LP30176 Lemma/palea-enriched cDNA library from dough stage of kernel Hordeum vulgare subsp. vulgare cDNA clone 3-176, mRNA sequence. Length=283 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 63 TGGCACGGCGCGATGCTCAGTCAG 86 >gb|BQ467836.1| HR01B10r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B10 5-PRIME, mRNA sequence. Length=321 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 31 TGGCACGGCGCGATGCTCAGTCAG 54 >gb|BQ462148.1| HD02D04r HD Hordeum vulgare cDNA clone HD02D04 5-PRIME, mRNA sequence. Length=355 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 62 TGGCACGGCGCGATGCTCAGTCAG 85 >emb|AJ486203.1| AJ486203 S00011 Hordeum vulgare cDNA clone S0001100152H01F1, mRNA sequence. Length=180 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 15 TGGCACGGCGCGATGCTCAGTCAG 38 >emb|AJ486202.1| AJ486202 S00011 Hordeum vulgare cDNA clone S0001100141D07F1, mRNA sequence. Length=180 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 13 TGGCACGGCGCGATGCTCAGTCAG 36 >gb|BM445267.1| EBem09_SQ007_O13_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ007_O13 5', mRNA sequence. Length=294 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 291 TGGCACGGCGCGATGCTCAGTCAG 268 >gb|BM444358.1| EBem09_SQ004_O18_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ004_O18 5', mRNA sequence. Length=343 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 292 TGGCACGGCGCGATGCTCAGTCAG 269 >gb|BM444122.1| EBem09_SQ004_D15_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ004_D15 5', mRNA sequence. Length=392 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 82 TGGCACGGCGCGATGCTCAGTCAG 105 >gb|BM443806.1| EBem09_SQ001_J04_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ001_J04 5', mRNA sequence. Length=315 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 24 TGGCACGGCGCGATGCTCAGTCAG 47 >gb|BM443638.1| EBem09_SQ001_A02_R embryo, 1 Day germination, no treatment, cv Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone EBem09_SQ001_A02 5', mRNA sequence. Length=236 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 169 TGGCACGGCGCGATGCTCAGTCAG 146 >gb|BG343309.2| HVSMEg0005G02f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0005G02f, mRNA sequence. Length=973 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 485 TGGCACGGCGCGATGCTCAGTCAG 508 >gb|BG342907.2| HVSMEg0001D13f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0001D13f, mRNA sequence. Length=840 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 487 TGGCACGGCGCGATGCTCAGTCAG 510 >gb|BI960270.1| HVSMEn0024A18f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024A18f, mRNA sequence. Length=646 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 185 TGGCACGGCGCGATGCTCAGTCAG 208 >gb|BI959664.1| HVSMEn0020K17f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020K17f, mRNA sequence. Length=662 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 307 TGGCACGGCGCGATGCTCAGTCAG 330 >gb|BI959039.1| HVSMEn0017O01f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017O01f, mRNA sequence. Length=718 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 129 TGGCACGGCGCGATGCTCAGTCAG 152 >gb|BI946902.1| HVSMEl0002L18f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0002L18f, mRNA sequence. Length=810 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 24 TGGCACGGCGCGATGCTCAGTCAG 47 >gb|BI776735.1| EBpi07_SQ001_J13_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ001_J13 5', mRNA sequence. Length=339 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 48 TGGCACGGCGCGATGCTCAGTCAG 71 >gb|BG417782.1| HVSMEk0019I02f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0019I02f, mRNA sequence. Length=755 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 69 TGGCACGGCGCGATGCTCAGTCAG 92 >gb|BE602255.2| HVSMEh0098D18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0098D18f, mRNA sequence. Length=559 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 322 TGGCACGGCGCGATGCTCAGTCAG 299 >emb|AL508350.1| AL508350 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY08I02 5', mRNA sequence. Length=548 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 276 TGGCACGGCGCGATGCTCAGTCAG 299 >emb|AL505469.1| AL505469 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW08J04 5', mRNA sequence. Length=516 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 389 TGGCACGGCGCGATGCTCAGTCAG 412 >emb|AL504115.1| AL504115 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW04E01 5', mRNA sequence. Length=488 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 465 TGGCACGGCGCGATGCTCAGTCAG 488 >emb|AL503002.1| AL503002 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09G16 3', mRNA sequence. Length=428 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 329 TGGCACGGCGCGATGCTCAGTCAG 306 >emb|AL502875.1| AL502875 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09A03 3', mRNA sequence. Length=516 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 311 TGGCACGGCGCGATGCTCAGTCAG 288 >emb|AL501654.1| AL501654 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW04O17 3', mRNA sequence. Length=517 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 309 TGGCACGGCGCGATGCTCAGTCAG 286 >emb|AL501165.1| AL501165 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW03E09 3', mRNA sequence. Length=548 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 309 TGGCACGGCGCGATGCTCAGTCAG 286 >gb|BE413256.1| MCG013.C01R990625 ITEC MCG Barley Leaf/Culm Library Hordeum vulgare cDNA clone MCG013.C01, mRNA sequence. Length=686 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCAG 24 |||||||||| |||||| |||||| Sbjct 483 TGGCACGGCGCGATGCTCAGTCAG 506 >gb|CB858500.1| HI07E08w HI Hordeum vulgare subsp. vulgare cDNA clone HI07E08 3-PRIME, mRNA sequence. Length=289 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 GGCACGGCGTGATGCTGAGTCAG 24 ||||||||| |||||| |||||| Sbjct 289 GGCACGGCGCGATGCTCAGTCAG 267 >gb|BU967368.1| HB04B10r BC Hordeum vulgare subsp. vulgare cDNA clone HB04B10 5-PRIME, mRNA sequence. Length=256 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 TGGCACGGCGTGATGCTGAGTCA 23 |||||||||| |||||| ||||| Sbjct 36 TGGCACGGCGCGATGCTCAGTCA 58 Query= tae-miR1134 MIMAT0005369 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|BU989003.1| HF19H03r HF Hordeum vulgare subsp. vulgare cDN... 42.8 1e-04 gb|GH226934.1| HVSMEm0021L07f2 Hordeum vulgare green seedling... 39.2 0.001 gb|GH217107.1| HVSMEg0004F17f2 Hordeum vulgare pre-anthesis s... 39.2 0.001 dbj|BY841987.1| BY841987 Etiolated seedling shoot Hordeum vul... 39.2 0.001 dbj|BY852895.1| BY852895 Germination shoots Hordeum vulgare s... 39.2 0.001 dbj|BY844640.1| BY844640 Seminal root Hordeum vulgare subsp. ... 39.2 0.001 gb|CK125154.1| BES1824106o02 BES1824 Hordeum vulgare subsp. v... 39.2 0.001 gb|CB882389.1| HL01L19w HL Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|CA029064.1| HZ64B16r HZ Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|BU998858.1| HI12G02r HI Hordeum vulgare subsp. vulgare cDN... 39.2 0.001 gb|BQ762580.1| EBro02_SQ004_I10_R root, 3 week, hydroponic gr... 39.2 0.001 gb|BQ762530.1| EBro02_SQ004_M01_R root, 3 week, hydroponic gr... 39.2 0.001 gb|BQ762321.1| EBro01_SQ005_P09_R root, 3 week, hydroponic gr... 39.2 0.001 gb|BG344997.2| HVSMEg0018D19f Hordeum vulgare pre-anthesis sp... 39.2 0.001 gb|BF259853.3| HVSMEf0020H04f Hordeum vulgare seedling root E... 39.2 0.001 gb|BI955167.1| HVSMEm0021L07f Hordeum vulgare green seedling ... 39.2 0.001 gb|BI952369.1| HVSMEm0006C01f Hordeum vulgare green seedling ... 39.2 0.001 gb|AW982841.2| HVSMEg0004F17f Hordeum vulgare pre-anthesis sp... 39.2 0.001 gb|BF618754.2| HVSMEc0007K19f Hordeum vulgare seedling shoot ... 39.2 0.001 gb|BF625738.2| HVSMEa0013H03f Hordeum vulgare seedling shoot ... 39.2 0.001 gb|BF625278.1| HVSMEa0008D07f Hordeum vulgare seedling shoot ... 39.2 0.001 gb|GH227222.1| HVSMEn0003B13r2 Hordeum vulgare rachis cDNA li... 37.4 0.004 gb|GH220319.1| HVSMEi0008A10f2 Hordeum vulgare 20 DAP spike c... 37.4 0.004 dbj|BY840872.1| BY840872 Etiolated seedling shoot Hordeum vul... 37.4 0.004 gb|CA014084.1| HT10F11r HT Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BU987552.1| HF15B01r HF Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BM369234.2| EBem07_SQ002_P24_R embryo, 28 DPA, no treatmen... 37.4 0.004 gb|BI779896.2| EBem07_SQ001_H22_R embryo, 28 DPA, no treatmen... 37.4 0.004 gb|BG369020.1| HVSMEi0022E17f Hordeum vulgare 20 DAP spike ES... 37.4 0.004 gb|BG366730.1| HVSMEi0008A10f Hordeum vulgare 20 DAP spike ES... 37.4 0.004 dbj|BY858111.1| BY858111 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY857525.1| BY857525 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY855942.1| BY855942 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY855822.1| BY855822 Germination shoots Hordeum vulgare s... 35.6 0.016 gb|CA020517.1| HZ36I20r HZ Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU976670.1| HA10B15r HA Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BM100994.2| EBpi01_SQ002_I17_R pistil, 1 DPA, no treatment... 35.6 0.016 gb|BQ459561.1| HA08M06r HA Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|BJ454171.1| BJ454171 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|AV832512.1| AV832512 K. Sato unpublished cDNA library: Ho... 35.6 0.016 gb|GH216071.1| HVSMEf0018K02r2 Hordeum vulgare seedling root ... 33.7 0.055 gb|GH207905.1| HV_CEb0005L21f2 Hordeum vulgare (Blumeria chal... 33.7 0.055 gb|EX591891.1| HDP04B15w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX591890.1| HDP04B15T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY841026.1| BY841026 Etiolated seedling shoot Hordeum vul... 33.7 0.055 dbj|BY846186.1| BY846186 Seminal root Hordeum vulgare subsp. ... 33.7 0.055 gb|CV063154.1| BNEL87c1 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CV062535.1| BNEL80b3 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CV060319.1| BNEL56h1 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CK569529.1| HO13J03w HO Hordeum vulgare cDNA clone HO13J03... 33.7 0.055 gb|CK566900.1| HO04P24w HO Hordeum vulgare cDNA clone HO04P24... 33.7 0.055 gb|CB876062.1| HX10C16w HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|CB869817.1| HC12I16w CH Hordeum vulgare cDNA clone HC12I16... 33.7 0.055 gb|CB859022.1| HI09A16w HI Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ762766.1| EBro02_SQ006_D03_R root, 3 week, hydroponic gr... 33.7 0.055 gb|BQ762093.1| EBpi01_SQ005_E20_R pistil, 1 DPA, no treatment... 33.7 0.055 gb|BQ761195.1| EBro04_SQ004_K04_R root, 3 week, salt-stressed... 33.7 0.055 gb|BQ761146.1| EBro04_SQ004_E23_R root, 3 week, salt-stressed... 33.7 0.055 gb|BQ754930.1| EBed02_SQ003_D17_R endosperm, 8 DPA, no treatm... 33.7 0.055 gb|BI777307.2| EBro03_SQ002_N07_R root, 3 week, waterlogged, ... 33.7 0.055 gb|BM443632.2| EBro02_SQ005_P15_R root, 3 week, hydroponic gr... 33.7 0.055 gb|BM371389.2| EBma08_SQ002_I19_R maternal, 28 DPA, no treatm... 33.7 0.055 gb|BQ739939.1| HB05D10 HB Hordeum vulgare subsp. vulgare cDNA... 33.7 0.055 gb|BQ665064.1| HX01P12w HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BQ470166.1| HX01P12T HX Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ454017.1| BJ454017 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BG309315.2| HVSMEc0007H20f Hordeum vulgare seedling shoot ... 33.7 0.055 gb|BI956461.1| HVSMEn0003I03f Hordeum vulgare rachis EST libr... 33.7 0.055 gb|BG300343.1| HVSMEb0012M05f Hordeum vulgare seedling shoot ... 33.7 0.055 emb|AL499742.1| AL499742 Hordeum vulgare Barke etiolated leav... 33.7 0.055 gb|BE215081.1| HV_CEb0005L21f Hordeum vulgare seedling green ... 33.7 0.055 ALIGNMENTS >gb|BU989003.1| HF19H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF19H03 5-PRIME, mRNA sequence. Length=489 Score = 42.8 bits (46), Expect = 1e-04 Identities = 23/23 (100%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||||||||||||||||||| Sbjct 48 CAACAACAACAAGAAGAAGAAGA 70 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 45 CAACAACAACAACAAGAAGAAGA 67 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||||| ||||||||||||| Sbjct 51 CAACAACAAGAAGAAGAAGAAGA 73 >gb|GH226934.1| HVSMEm0021L07f2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0043B03r, mRNA sequence. Length=597 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 92 CAACAACAAGAAGAAGAAGAT 72 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 92 CAACAACAAGAAGAAGAAGATGAT 69 >gb|GH217107.1| HVSMEg0004F17f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVSMEg (HVcDNA0008)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0022M05r, mRNA sequence. Length=524 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 253 CAACAACAAGAAGAAGAAGAT 273 >dbj|BY841987.1| BY841987 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet64h09 5', mRNA sequence. Length=467 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 68 CAACAACAAGAAGAAGAAGAT 48 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 68 CAACAACAAGAAGAAGAAGATGAT 45 >dbj|BY852895.1| BY852895 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast62d02 5', mRNA sequence. Length=455 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 59 CAACAACAAGAAGAAGAAGAT 39 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 59 CAACAACAAGAAGAAGAAGATGAT 36 >dbj|BY844640.1| BY844640 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart09e09 5', mRNA sequence. Length=449 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 68 CAACAACAAGAAGAAGAAGAT 48 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 68 CAACAACAAGAAGAAGAAGATGAT 45 >gb|CK125154.1| BES1824106o02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010O02106 5-PRIME, mRNA sequence. Length=819 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 71 CAACAACAAGAAGAAGAAGAT 51 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 71 CAACAACAAGAAGAAGAAGATGAT 48 >gb|CB882389.1| HL01L19w HL Hordeum vulgare subsp. vulgare cDNA clone HL01L19 3-PRIME, mRNA sequence. Length=628 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 69 CAACAACAAGAAGAAGAAGAT 49 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 69 CAACAACAAGAAGAAGAAGATGAT 46 >gb|CA029064.1| HZ64B16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64B16 5-PRIME, mRNA sequence. Length=347 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 45 CAACAACAAGAAGAAGAAGAT 25 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 45 CAACAACAAGAAGAAGAAGATGAT 22 >gb|BU998858.1| HI12G02r HI Hordeum vulgare subsp. vulgare cDNA clone HI12G02 5-PRIME, mRNA sequence. Length=592 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 43 CAACAACAAGAAGAAGAAGAT 23 >gb|BQ762580.1| EBro02_SQ004_I10_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ004_I10 5', mRNA sequence. Length=598 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 55 CAACAACAAGAAGAAGAAGAT 35 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 55 CAACAACAAGAAGAAGAAGATGAT 32 >gb|BQ762530.1| EBro02_SQ004_M01_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ004_M01 5', mRNA sequence. Length=597 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 55 CAACAACAAGAAGAAGAAGAT 35 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 55 CAACAACAAGAAGAAGAAGATGAT 32 >gb|BQ762321.1| EBro01_SQ005_P09_R root, 3 week, hydroponic grown, no treatment, cv Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone EBro01_SQ005_P09 5', mRNA sequence. Length=557 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 55 CAACAACAAGAAGAAGAAGAT 35 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 55 CAACAACAAGAAGAAGAAGATGAT 32 >gb|BG344997.2| HVSMEg0018D19f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018D19f, mRNA sequence. Length=836 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 46 CAACAACAAGAAGAAGAAGAT 26 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 46 CAACAACAAGAAGAAGAAGATGAT 23 >gb|BF259853.3| HVSMEf0020H04f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0020H04f, mRNA sequence. Length=828 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 49 CAACAACAAGAAGAAGAAGAT 29 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 49 CAACAACAAGAAGAAGAAGATGAT 26 >gb|BI955167.1| HVSMEm0021L07f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0021L07f, mRNA sequence. Length=672 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 93 CAACAACAAGAAGAAGAAGAT 73 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 93 CAACAACAAGAAGAAGAAGATGAT 70 >gb|BI952369.1| HVSMEm0006C01f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0006C01f, mRNA sequence. Length=820 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 54 CAACAACAAGAAGAAGAAGAT 34 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 54 CAACAACAAGAAGAAGAAGATGAT 31 >gb|AW982841.2| HVSMEg0004F17f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0004F17f, mRNA sequence. Length=600 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 253 CAACAACAAGAAGAAGAAGAT 273 >gb|BF618754.2| HVSMEc0007K19f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0007K19f, mRNA sequence. Length=785 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 47 CAACAACAAGAAGAAGAAGAT 27 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 47 CAACAACAAGAAGAAGAAGATGAT 24 >gb|BF625738.2| HVSMEa0013H03f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0013H03f, mRNA sequence. Length=481 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 44 CAACAACAAGAAGAAGAAGAT 24 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 44 CAACAACAAGAAGAAGAAGATGAT 21 >gb|BF625278.1| HVSMEa0008D07f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0008D07f, mRNA sequence. Length=481 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 4 CAACAACAAGAAGAAGAAGAT 24 ||||||||||||||||||||| Sbjct 46 CAACAACAAGAAGAAGAAGAT 26 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGAT 24 ||||||||| |||||||||| ||| Sbjct 46 CAACAACAAGAAGAAGAAGATGAT 23 >gb|GH227222.1| HVSMEn0003B13r2 Hordeum vulgare rachis cDNA library HVSMEn (HVcDNA0015)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0044A19f, mRNA sequence. Length=611 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAGAA 21 |||||||||||||||||||| Sbjct 96 AACAACAACAAGAAGAAGAA 115 >gb|GH220319.1| HVSMEi0008A10f2 Hordeum vulgare 20 DAP spike cDNA library HVSMEi (HVcDNA0010)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0030E15r, mRNA sequence. Length=485 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 128 CAACAACGACAAGAAGAAGAAGA 150 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 131 CAACGACAAGAAGAAGAAGAAGA 153 >dbj|BY840872.1| BY840872 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet50d01 5', mRNA sequence. Length=429 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 127 CAACAACGACAAGAAGAAGAAGA 149 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 130 CAACGACAAGAAGAAGAAGAAGA 152 >gb|CA014084.1| HT10F11r HT Hordeum vulgare subsp. vulgare cDNA clone HT10F11 5-PRIME, mRNA sequence. Length=663 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 45 CAACAACGACAAGAAGAAGAAGA 67 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 48 CAACGACAAGAAGAAGAAGAAGA 70 >gb|BU987552.1| HF15B01r HF Hordeum vulgare subsp. vulgare cDNA clone HF15B01 5-PRIME, mRNA sequence. Length=364 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 126 CAACAACGACAAGAAGAAGAAGA 148 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 129 CAACGACAAGAAGAAGAAGAAGA 151 >gb|BM369234.2| EBem07_SQ002_P24_R embryo, 28 DPA, no treatment, cv Optic, EBem07 Hordeum vulgare subsp. vulgare cDNA clone EBem07_SQ002_P24 5', mRNA sequence. Length=497 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 111 CAACAACGACAAGAAGAAGAAGA 133 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 114 CAACGACAAGAAGAAGAAGAAGA 136 >gb|BI779896.2| EBem07_SQ001_H22_R embryo, 28 DPA, no treatment, cv Optic, EBem07 Hordeum vulgare subsp. vulgare cDNA clone EBem07_SQ001_H22 5', mRNA sequence. Length=501 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 115 CAACAACGACAAGAAGAAGAAGA 137 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 118 CAACGACAAGAAGAAGAAGAAGA 140 >gb|BG369020.1| HVSMEi0022E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0022E17f, mRNA sequence. Length=860 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 121 CAACAACGACAAGAAGAAGAAGA 143 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 124 CAACGACAAGAAGAAGAAGAAGA 146 >gb|BG366730.1| HVSMEi0008A10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0008A10f, mRNA sequence. Length=502 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| ||||||||||||||| Sbjct 128 CAACAACGACAAGAAGAAGAAGA 150 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||| |||| ||||||||||||| Sbjct 131 CAACGACAAGAAGAAGAAGAAGA 153 >dbj|BY858111.1| BY858111 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl56f07 5', mRNA sequence. Length=480 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||| ||||||||| Sbjct 383 CAACAACAACAACAAGAAGAAG 362 >dbj|BY857525.1| BY857525 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl46a02 5', mRNA sequence. Length=488 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||| ||||||||| Sbjct 381 CAACAACAACAACAAGAAGAAG 360 >dbj|BY855942.1| BY855942 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl24b09 5', mRNA sequence. Length=400 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||| ||||||||| Sbjct 381 CAACAACAACAACAAGAAGAAG 360 >dbj|BY855822.1| BY855822 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl22d03 5', mRNA sequence. Length=486 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||| ||||||||| Sbjct 374 CAACAACAACAACAAGAAGAAG 353 >gb|CA020517.1| HZ36I20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36I20 5-PRIME, mRNA sequence. Length=557 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||||| ||||||| Sbjct 328 CAACAACAACAAGAGGAAGAAG 349 >gb|BU976670.1| HA10B15r HA Hordeum vulgare subsp. vulgare cDNA clone HA10B15 5-PRIME, mRNA sequence. Length=295 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAGAAGA 23 ||||| |||||||||||||||| Sbjct 199 AACAAGAACAAGAAGAAGAAGA 220 >gb|BM100994.2| EBpi01_SQ002_I17_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulgare cDNA clone EBpi01_SQ002_I17 5', mRNA sequence. Length=448 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAG 22 |||||||||||||| ||||||| Sbjct 326 CAACAACAACAAGAGGAAGAAG 347 >gb|BQ459561.1| HA08M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA08M06 5-PRIME, mRNA sequence. Length=293 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAGAAGA 23 ||||| |||||||||||||||| Sbjct 199 AACAAGAACAAGAAGAAGAAGA 220 >dbj|BJ454171.1| BJ454171 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak46g12 5', mRNA sequence. Length=726 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 2 AACAACAACAAGAAGAAGA 20 ||||||||||||||||||| Sbjct 88 AACAACAACAAGAAGAAGA 70 >dbj|AV832512.1| AV832512 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare leaves vegetative stage Hordeum vulgare subsp. vulgare cDNA clone baak4e13, mRNA sequence. Length=219 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 2 AACAACAACAAGAAGAAGAAGA 23 ||||| |||||||||||||||| Sbjct 55 AACAAGAACAAGAAGAAGAAGA 34 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||| ||||| ||||||||||||| Sbjct 53 CAAGAACAAGAAGAAGAAGAAGA 31 >gb|GH216071.1| HVSMEf0018K02r2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HVcDNA0007)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0020M01f, mRNA sequence. Length=452 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 189 CAACAACAACAA-AAGAAGAAGA 210 >gb|GH207905.1| HV_CEb0005L21f2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEb (HVcDNA0005)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0003D07r, mRNA sequence. Length=464 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAG 19 |||||||||||||||||| Sbjct 361 AACAACAACAAGAAGAAG 378 >gb|EX591891.1| HDP04B15w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04B15, mRNA sequence. Length=492 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAA 21 ||| ||||||||||||||||| Sbjct 404 CAAAAACAACAAGAAGAAGAA 384 >gb|EX591890.1| HDP04B15T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04B15, mRNA sequence. Length=470 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAA 21 ||| ||||||||||||||||| Sbjct 96 CAAAAACAACAAGAAGAAGAA 116 >dbj|BY841026.1| BY841026 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet52a07 5', mRNA sequence. Length=397 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||| |||||||||||||| Sbjct 326 CAACAACA-CAAGAAGAAGAAGA 347 >dbj|BY846186.1| BY846186 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart29a05 5', mRNA sequence. Length=508 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||| |||||||||||||| Sbjct 58 CAACAACA-CAAGAAGAAGAAGA 79 >gb|CV063154.1| BNEL87c1 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL87c1 5' similar to Unknown Function, mRNA sequence. Length=545 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || |||||||| ||||||||||| Sbjct 357 CAGCAACAACAGGAAGAAGAAGA 379 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||| ||||||||||||| Sbjct 360 CAACAACAGGAAGAAGAAGAAGA 382 >gb|CV062535.1| BNEL80b3 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL80b3 5' similar to Unknown Function, mRNA sequence. Length=545 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || |||||||| ||||||||||| Sbjct 357 CAGCAACAACAGGAAGAAGAAGA 379 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||| ||||||||||||| Sbjct 360 CAACAACAGGAAGAAGAAGAAGA 382 >gb|CV060319.1| BNEL56h1 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL56h1 5' similar to Unknown Function, mRNA sequence. Length=478 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || |||||||| ||||||||||| Sbjct 357 CAGCAACAACAGGAAGAAGAAGA 379 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||| ||||||||||||| Sbjct 360 CAACAACAGGAAGAAGAAGAAGA 382 >gb|CK569529.1| HO13J03w HO Hordeum vulgare cDNA clone HO13J03 3-PRIME, mRNA sequence. Length=700 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAA 21 ||| ||||||||||||||||| Sbjct 39 CAAAAACAACAAGAAGAAGAA 59 >gb|CK566900.1| HO04P24w HO Hordeum vulgare cDNA clone HO04P24 3-PRIME, mRNA sequence. Length=328 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAA 21 ||| ||||||||||||||||| Sbjct 46 CAAAAACAACAAGAAGAAGAA 66 >gb|CB876062.1| HX10C16w HX Hordeum vulgare subsp. vulgare cDNA clone HX10C16 3-PRIME, mRNA sequence. Length=615 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 186 CAACAACAACAA-AAGAAGAAGA 207 >gb|CB869817.1| HC12I16w CH Hordeum vulgare cDNA clone HC12I16 5-PRIME, mRNA sequence. Length=447 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 291 CAACAACAACAA-AAGAAGAAGA 270 >gb|CB859022.1| HI09A16w HI Hordeum vulgare subsp. vulgare cDNA clone HI09A16 3-PRIME, mRNA sequence. Length=632 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || ||||| |||||||||||||| Sbjct 2 CACCAACACCAAGAAGAAGAAGA 24 >gb|BQ762766.1| EBro02_SQ006_D03_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ006_D03 5', mRNA sequence. Length=394 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || ||||| |||||||||||||| Sbjct 16 CACCAACACCAAGAAGAAGAAGA 38 >gb|BQ762093.1| EBpi01_SQ005_E20_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulgare cDNA clone EBpi01_SQ005_E20 5', mRNA sequence. Length=342 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 176 CAACAACAACAA-AAGAAGAAGA 155 >gb|BQ761195.1| EBro04_SQ004_K04_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ004_K04 5', mRNA sequence. Length=152 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || ||||| |||||||||||||| Sbjct 10 CACCAACACCAAGAAGAAGAAGA 32 >gb|BQ761146.1| EBro04_SQ004_E23_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ004_E23 5', mRNA sequence. Length=194 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || ||||| |||||||||||||| Sbjct 16 CACCAACACCAAGAAGAAGAAGA 38 >gb|BQ754930.1| EBed02_SQ003_D17_R endosperm, 8 DPA, no treatment, cv Optic, EBed02 Hordeum vulgare subsp. vulgare cDNA clone EBed02_SQ003_D17 5', mRNA sequence. Length=424 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 237 CAACAACAACAA-AAGAAGAAGA 216 >gb|BI777307.2| EBro03_SQ002_N07_R root, 3 week, waterlogged, cv Optic, EBro03 Hordeum vulgare subsp. vulgare cDNA clone EBro03_SQ002_N07 5', mRNA sequence. Length=259 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAGAAGAT 24 || ||||||| |||||||||||| Sbjct 129 AAGAACAACATGAAGAAGAAGAT 151 >gb|BM443632.2| EBro02_SQ005_P15_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ005_P15 5', mRNA sequence. Length=659 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 4 CAACAACAAGAAGAAGAAGAT 24 |||||||||||||| |||||| Sbjct 389 CAACAACAAGAAGAGGAAGAT 409 >gb|BM371389.2| EBma08_SQ002_I19_R maternal, 28 DPA, no treatment, cv Optic, EBma08 Hordeum vulgare subsp. vulgare cDNA clone EBma08_SQ002_I19 5', mRNA sequence. Length=483 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| || ||||||| Sbjct 115 CAACAACAACAACAACAAGAAGA 137 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAA 21 |||||||||||| |||||||| Sbjct 118 CAACAACAACAACAAGAAGAA 138 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAA 21 |||||||||||||||||| || Sbjct 121 CAACAACAACAAGAAGAACAA 141 >gb|BQ739939.1| HB05D10 HB Hordeum vulgare subsp. vulgare cDNA clone HB05D10 similar to ABA-induced plasma membrane protein PM 19 - wheat gi|1724112|gb|AAB38504.1| (U80037) ABA induced plasma membrane protein PM 19 [Triticum aestivum], mRNA sequence. Length=639 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||||||| || |||||||||||| Sbjct 90 CAACAACGACNAGAAGAAGAAGA 112 >gb|BQ665064.1| HX01P12w HX Hordeum vulgare subsp. vulgare cDNA clone HX01P12 3-PRIME, mRNA sequence. Length=251 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 141 CAACAACAACAA-AAGAAGAAGA 162 >gb|BQ470166.1| HX01P12T HX Hordeum vulgare subsp. vulgare cDNA clone HX01P12 5-PRIME, mRNA sequence. Length=272 Score = 33.7 bits (36), Expect = 0.055 Identities = 22/23 (95%), Gaps = 1/23 (4%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 |||||||||||| |||||||||| Sbjct 142 CAACAACAACAA-AAGAAGAAGA 121 >dbj|BJ454017.1| BJ454017 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak45j15 5', mRNA sequence. Length=233 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 2 AACAACAACAAGAAGAAGAAG 22 ||||| ||||||||||||||| Sbjct 21 AACAAGAACAAGAAGAAGAAG 1 >gb|BG309315.2| HVSMEc0007H20f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0007H20f, mRNA sequence. Length=871 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAG 19 |||||||||||||||||| Sbjct 67 AACAACAACAAGAAGAAG 84 >gb|BI956461.1| HVSMEn0003I03f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0003I03f, mRNA sequence. Length=451 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||| ||||| ||||||||||||| Sbjct 60 CAAGAACAAGAAGAAGAAGAAGA 38 >gb|BG300343.1| HVSMEb0012M05f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0012M05f, mRNA sequence. Length=519 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 1 CAACAACAACAAGAAGAAGAAGA 23 ||| ||||| ||||||||||||| Sbjct 108 CAAGAACAAGAAGAAGAAGAAGA 130 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAGAAGAT 24 ||||| || |||||||||||||| Sbjct 112 AACAAGAAGAAGAAGAAGAAGAT 134 >emb|AL499742.1| AL499742 Hordeum vulgare Barke etiolated leaves Hordeum vulgare subsp. vulgare cDNA clone HK03D09 3', mRNA sequence. Length=386 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 1 CAACAACAACAAGAAGAAGAAGA 23 || ||||| |||||||||||||| Sbjct 375 CACCAACACCAAGAAGAAGAAGA 353 >gb|BE215081.1| HV_CEb0005L21f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0005L21f, mRNA sequence. Length=947 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 2 AACAACAACAAGAAGAAG 19 |||||||||||||||||| Sbjct 383 AACAACAACAAGAAGAAG 400 Query= tae-miR1135 MIMAT0005370 Length=24 Score E Sequences producing significant alignments: (Bits) Value gb|CA010201.1| HT11F05u HT Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|FD524148.1| RUS72E12w HF Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|EX598506.1| HDP07H09T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|DN184813.1| HO36D07w HO Hordeum vulgare cDNA clone HO36D07... 35.6 0.016 emb|AJ462658.1| AJ462658 S00002 Hordeum vulgare subsp. vulgar... 35.6 0.016 dbj|AV834372.1| AV834372 K. Sato unpublished cDNA library: Ho... 35.6 0.016 emb|AL450817.1| AL450817 Hordeum vulgare Barke etiolated leav... 35.6 0.016 gb|FD523444.1| RUS63E06w HF Hordeum vulgare subsp. vulgare cD... 33.7 0.055 gb|FD517994.1| RUS49G05w HB (Hordeum vulgare cv. Barke) Horde... 33.7 0.055 gb|EX595506.1| HDP24I23w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX595505.1| HDP24I23T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX597427.1| HDP15D05T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX597422.1| HDP15D05w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY858979.1| BY858979 Etiolated seedling shoot Hordeum vul... 33.7 0.055 gb|DN180267.1| HO27L15S HO Hordeum vulgare cDNA clone HO27L15... 33.7 0.055 gb|CX628102.1| GBN007E09u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|CV062707.1| BNEL82a9 Barley EST endosperm library Hordeum ... 33.7 0.055 gb|CA016582.1| HV08A16u HV Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 gb|BU991683.1| HD07K07r HD Hordeum vulgare cDNA clone HD07K07... 33.7 0.055 gb|BU973936.1| HB26F24r BC Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 dbj|BJ476131.1| BJ476131 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV921170.1| AV921170 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV920708.1| AV920708 K. Sato unpublished cDNA library, cv... 33.7 0.055 gb|BI954805.1| HVSMEm0019N18f Hordeum vulgare green seedling ... 33.7 0.055 ALIGNMENTS >gb|CA010201.1| HT11F05u HT Hordeum vulgare subsp. vulgare cDNA clone HT11F05 3-PRIME, mRNA sequence. Length=358 Score = 37.4 bits (40), Expect = 0.004 Identities = 22/23 (95%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||||||||||||||| ||||| Sbjct 175 TGCGACAAGTAATTCCGGACGGA 153 >gb|FD524148.1| RUS72E12w HF Hordeum vulgare subsp. vulgare cDNA clone HF17B20, mRNA sequence. Length=407 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAA 20 ||||||||||||||||||| Sbjct 74 TGCGACAAGTAATTCCGAA 92 >gb|EX598506.1| HDP07H09T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07H09, mRNA sequence. Length=582 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 CTGCGACAAGTAATTCCGAACG 22 |||||||||||||||||| ||| Sbjct 239 CTGCGACAAGTAATTCCGGACG 260 >gb|DN184813.1| HO36D07w HO Hordeum vulgare cDNA clone HO36D07 3-PRIME, mRNA sequence. Length=461 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAA 20 ||||||||||||||||||| Sbjct 32 TGCGACAAGTAATTCCGAA 50 >emb|AJ462658.1| AJ462658 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200041H05F1, mRNA sequence. Length=360 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAA 20 ||||||||||||||||||| Sbjct 95 TGCGACAAGTAATTCCGAA 113 >dbj|AV834372.1| AV834372 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare shoots germination Hordeum vulgare subsp. vulgare cDNA clone bags15n22, mRNA sequence. Length=632 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAA 20 ||||||||||||||||||| Sbjct 35 TGCGACAAGTAATTCCGAA 53 >emb|AL450817.1| AL450817 Hordeum vulgare Barke etiolated leaves Hordeum vulgare subsp. vulgare cDNA clone HK04F22 5', mRNA sequence. Length=525 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 CTGCGACAAGTAATTCCGAACGGA 24 |||||||||||||||||| || || Sbjct 456 CTGCGACAAGTAATTCCGGACNGA 479 >gb|FD523444.1| RUS63E06w HF Hordeum vulgare subsp. vulgare cDNA clone HF08L23, mRNA sequence. Length=669 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 140 TGCGATAAGTAATTCCGGACGGA 162 >gb|FD517994.1| RUS49G05w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB26F24, mRNA sequence. Length=552 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 94 TGTGACAAGTAATTCCGGACGGA 72 >gb|EX595506.1| HDP24I23w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24I23, mRNA sequence. Length=549 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 |||||||||||||||| ||||| Sbjct 491 TGCGACAAGTAATTCCTGACGGA 469 >gb|EX595505.1| HDP24I23T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24I23, mRNA sequence. Length=543 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 |||||||||||||||| ||||| Sbjct 198 TGCGACAAGTAATTCCTGACGGA 220 >gb|EX597427.1| HDP15D05T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15D05, mRNA sequence. Length=458 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 194 TGCGATAAGTAATTCCGGACGGA 216 >gb|EX597422.1| HDP15D05w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP15D05, mRNA sequence. Length=500 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 298 TGCGATAAGTAATTCCGGACGGA 276 >dbj|BY858979.1| BY858979 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet112e10 3', mRNA sequence. Length=353 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 39 TGGGACAAGTAATTCCGGACGGA 61 >gb|DN180267.1| HO27L15S HO Hordeum vulgare cDNA clone HO27L15 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 538 TGTGACAAGTAATTCCGGACGGA 516 >gb|CX628102.1| GBN007E09u GBN Hordeum vulgare cDNA clone GBN007E09 3-PRIME, mRNA sequence. Length=417 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 262 TGGGACAAGTAATTCCGGACGGA 284 >gb|CV062707.1| BNEL82a9 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL82a9 5' similar to Unknown Function, mRNA sequence. Length=579 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 161 TGGGACAAGTAATTCCGGACGGA 183 >gb|CA016582.1| HV08A16u HV Hordeum vulgare subsp. vulgare cDNA clone HV08A16 3-PRIME, mRNA sequence. Length=550 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Minus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 138 TGTGACAAGTAATTCCGGACGGA 116 >gb|BU991683.1| HD07K07r HD Hordeum vulgare cDNA clone HD07K07 5-PRIME, mRNA sequence. Length=550 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 465 TGTGACAAGTAATTCCGGACGGA 487 >gb|BU973936.1| HB26F24r BC Hordeum vulgare subsp. vulgare cDNA clone HB26F24 5-PRIME, mRNA sequence. Length=581 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 || |||||||||||||| ||||| Sbjct 491 TGTGACAAGTAATTCCGGACGGA 513 >dbj|BJ476131.1| BJ476131 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal32e06 3', mRNA sequence. Length=714 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 203 TGCGATAAGTAATTCCGGACGGA 225 >dbj|AV921170.1| AV921170 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags1e01 3', mRNA sequence. Length=595 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 180 TGCGATAAGTAATTCCGGACGGA 202 >dbj|AV920708.1| AV920708 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags15e07 3', mRNA sequence. Length=479 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||| ||||||||||| ||||| Sbjct 150 TGCGATAAGTAATTCCGGACGGA 172 >gb|BI954805.1| HVSMEm0019N18f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0019N18f, mRNA sequence. Length=670 Score = 33.7 bits (36), Expect = 0.055 Identities = 21/23 (91%), Gaps = 0/23 (0%) Strand=Plus/Plus Query 2 TGCGACAAGTAATTCCGAACGGA 24 ||||||||||||||||| | ||| Sbjct 427 TGCGACAAGTAATTCCGGATGGA 449 Query= tae-miR1121 MIMAT0005356 Length=22 Score E Sequences producing significant alignments: (Bits) Value dbj|BY848300.1| BY848300 Seminal root Hordeum vulgare subsp. ... 41.0 4e-04 dbj|BY845018.1| BY845018 Seminal root Hordeum vulgare subsp. ... 41.0 4e-04 dbj|BY840212.1| BY840212 Etiolated seedling shoot Hordeum vul... 39.2 0.001 dbj|BY838250.1| BY838250 Etiolated seedling shoot Hordeum vul... 39.2 0.001 dbj|BY836959.1| BY836959 Etiolated seedling shoot Hordeum vul... 39.2 0.001 dbj|BY846289.1| BY846289 Seminal root Hordeum vulgare subsp. ... 39.2 0.001 dbj|BY844680.1| BY844680 Seminal root Hordeum vulgare subsp. ... 39.2 0.001 gb|GH208317.1| HV_CEb0010N04r2 Hordeum vulgare (Blumeria chal... 37.4 0.004 gb|FD522234.1| RUS124E01r HA Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|FC555790.1| CCC43 barley embryos inoculated for 7 and 14 d... 37.4 0.004 gb|EX591441.1| HDP07N11T HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX591437.1| HDP07N11w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX601113.1| HDP42P10w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX601112.1| HDP42P10T HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX587628.1| HDP29G01T HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|EX587623.1| HDP29G01w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 dbj|BY867242.1| BY867242 Seminal root Hordeum vulgare subsp. ... 37.4 0.004 gb|DN188870.1| HO19H24w HO Hordeum vulgare cDNA clone HO19H24... 37.4 0.004 gb|DN187056.1| HO27K10w HO Hordeum vulgare cDNA clone HO27K10... 37.4 0.004 gb|DN186686.1| HO28L03w HO Hordeum vulgare cDNA clone HO28L03... 37.4 0.004 gb|CK569040.1| HO12A02w HO Hordeum vulgare cDNA clone HO12A02... 37.4 0.004 gb|CK568591.1| HO10I11w HO Hordeum vulgare cDNA clone HO10I11... 37.4 0.004 gb|CK565957.1| HO02A10w HO Hordeum vulgare cDNA clone HO02A10... 37.4 0.004 gb|BQ761197.1| EBro04_SQ004_K13_R root, 3 week, salt-stressed... 37.4 0.004 gb|BQ656484.1| HA04F01u HA Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BQ458760.1| HA04F01r HA Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 emb|AJ484964.1| AJ484964 S00011 Hordeum vulgare cDNA clone S0... 37.4 0.004 emb|AJ484963.1| AJ484963 S00011 Hordeum vulgare cDNA clone S0... 37.4 0.004 dbj|BJ461877.1| BJ461877 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ455329.1| BJ455329 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ448740.1| BJ448740 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|BJ447578.1| BJ447578 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV928265.1| AV928265 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV927890.1| AV927890 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV918531.1| AV918531 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV912245.1| AV912245 K. Sato unpublished cDNA library, cv... 37.4 0.004 dbj|AV910077.1| AV910077 K. Sato unpublished cDNA library, cv... 37.4 0.004 gb|BI956127.1| HVSMEm0025M04f Hordeum vulgare green seedling ... 37.4 0.004 dbj|AV836141.1| AV836141 K. Sato unpublished cDNA library: Ho... 37.4 0.004 gb|BE216561.2| HV_CEb0010N04f Hordeum vulgare seedling green ... 37.4 0.004 gb|GH222673.1| HVSMEk0016H18r2 Hordeum vulgare testa/pericarp... 35.6 0.016 gb|FD524111.1| RUS72B02w HF Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|FD523912.1| RUS69C11w HF Hordeum vulgare subsp. vulgare cD... 35.6 0.016 gb|FD518089.1| RUS51A09w HB (Hordeum vulgare cv. Barke) Horde... 35.6 0.016 gb|EX599546.1| HDP02O14w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX599545.1| HDP02O14T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX586433.1| HDP03O21w HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 gb|EX592001.1| HDP03O21T HDP Hordeum vulgare subsp. vulgare c... 35.6 0.016 dbj|BY847400.1| BY847400 Seminal root Hordeum vulgare subsp. ... 35.6 0.016 dbj|BY876909.1| BY876909 Germination shoots Hordeum vulgare s... 35.6 0.016 dbj|BY875474.1| BY875474 Germination shoots Hordeum vulgare s... 35.6 0.016 gb|CB866792.1| HC06B09w CH Hordeum vulgare cDNA clone HC06B09... 35.6 0.016 gb|CA006505.1| HU13J19u HU Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU987786.1| HF15M06r HF Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU974982.1| HB29L18r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 gb|BU970654.1| HB15E18r BC Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 emb|AJ475374.1| AJ475374 S00008 Hordeum vulgare cDNA clone S0... 35.6 0.016 dbj|BJ482541.1| BJ482541 K. Sato unpublished cDNA library, st... 35.6 0.016 dbj|BJ482407.1| BJ482407 K. Sato unpublished cDNA library, st... 35.6 0.016 gb|BM816030.1| HC109G05_T3.ab1 HC Hordeum vulgare subsp. vulg... 35.6 0.016 gb|BM816024.1| HC03A03_T3.ab1 HC Hordeum vulgare subsp. vulga... 35.6 0.016 dbj|AV944995.1| AV944995 K. Sato unpublished cDNA library, st... 35.6 0.016 gb|BM100883.1| EBpi01_SQ002_E09_R pistil, 1 DPA, no treatment... 35.6 0.016 gb|CX630268.1| GW002A05r GW Hordeum vulgare cDNA clone GW002A... 33.7 0.055 gb|CX628296.1| GBN007N10u GBN Hordeum vulgare cDNA clone GBN0... 33.7 0.055 gb|BM443417.2| EBro02_SQ005_A20_R root, 3 week, hydroponic gr... 33.7 0.055 dbj|BJ462560.1| BJ462560 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV934721.1| AV934721 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >dbj|BY848300.1| BY848300 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart55b11 5', mRNA sequence. Length=595 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||||| Sbjct 23 AGTAGTGATCTAAACGCTCTTA 2 >dbj|BY845018.1| BY845018 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart13g06 5', mRNA sequence. Length=522 Score = 41.0 bits (44), Expect = 4e-04 Identities = 22/22 (100%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||||| Sbjct 23 AGTAGTGATCTAAACGCTCTTA 2 >dbj|BY840212.1| BY840212 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet39f11 5', mRNA sequence. Length=434 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTT 21 ||||||||||||||||||||| Sbjct 21 AGTAGTGATCTAAACGCTCTT 1 >dbj|BY838250.1| BY838250 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet15d06 5', mRNA sequence. Length=466 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTT 21 ||||||||||||||||||||| Sbjct 21 AGTAGTGATCTAAACGCTCTT 1 >dbj|BY836959.1| BY836959 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet115b02 5', mRNA sequence. Length=448 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTT 21 ||||||||||||||||||||| Sbjct 21 AGTAGTGATCTAAACGCTCTT 1 >dbj|BY846289.1| BY846289 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart30b06 5', mRNA sequence. Length=593 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTT 21 ||||||||||||||||||||| Sbjct 21 AGTAGTGATCTAAACGCTCTT 1 >dbj|BY844680.1| BY844680 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart10a05 5', mRNA sequence. Length=564 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTT 21 ||||||||||||||||||||| Sbjct 21 AGTAGTGATCTAAACGCTCTT 1 >gb|GH208317.1| HV_CEb0010N04r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEb (HVcDNA0005)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0004M04f, mRNA sequence. Length=576 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 225 TAGTGATCTAAACGCTCTTA 244 >gb|FD522234.1| RUS124E01r HA Hordeum vulgare subsp. vulgare cDNA clone HA01M06, mRNA sequence. Length=626 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 121 TAGTGATCTAAACGCTCTTA 102 >gb|FC555790.1| CCC43 barley embryos inoculated for 7 and 14 days with the leaf stripe pathogen Hordeum vulgare cDNA clone CCC43 similar to peptide transporter, mRNA sequence. Length=333 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 250 TAGTGATCTAAACGCTCTTA 231 >gb|EX591441.1| HDP07N11T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07N11, mRNA sequence. Length=578 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 198 TAGTGATCTAAACGCTCTTA 217 >gb|EX591437.1| HDP07N11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP07N11, mRNA sequence. Length=623 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 415 TAGTGATCTAAACGCTCTTA 396 >gb|EX601113.1| HDP42P10w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP42P10, mRNA sequence. Length=637 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 487 TAGTGATCTAAACGCTCTTA 468 >gb|EX601112.1| HDP42P10T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP42P10, mRNA sequence. Length=623 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 137 TAGTGATCTAAACGCTCTTA 156 >gb|EX587628.1| HDP29G01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP29G01, mRNA sequence. Length=525 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 144 TAGTGATCTAAACGCTCTTA 163 >gb|EX587623.1| HDP29G01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP29G01, mRNA sequence. Length=561 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 412 TAGTGATCTAAACGCTCTTA 393 >dbj|BY867242.1| BY867242 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart27d08 3', mRNA sequence. Length=523 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 103 TAGTGATCTAAACGCTCTTA 84 >gb|DN188870.1| HO19H24w HO Hordeum vulgare cDNA clone HO19H24 3-PRIME, mRNA sequence. Length=686 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 83 TAGTGATCTAAACGCTCTTA 102 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||||||||| |||||| Sbjct 81 AGTAGTGATCTAAACACTCTTA 60 >gb|DN187056.1| HO27K10w HO Hordeum vulgare cDNA clone HO27K10 3-PRIME, mRNA sequence. Length=498 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 206 TAGTGATCTAAACGCTCTTA 225 >gb|DN186686.1| HO28L03w HO Hordeum vulgare cDNA clone HO28L03 3-PRIME, mRNA sequence. Length=691 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 65 TAGTGATCTAAACGCTCTTA 46 >gb|CK569040.1| HO12A02w HO Hordeum vulgare cDNA clone HO12A02 3-PRIME, mRNA sequence. Length=203 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 145 TAGTGATCTAAACGCTCTTA 164 >gb|CK568591.1| HO10I11w HO Hordeum vulgare cDNA clone HO10I11 3-PRIME, mRNA sequence. Length=678 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 218 TAGTGATCTAAACGCTCTTA 237 >gb|CK565957.1| HO02A10w HO Hordeum vulgare cDNA clone HO02A10 3-PRIME, mRNA sequence. Length=405 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 184 TAGTGATCTAAACGCTCTTA 203 >gb|BQ761197.1| EBro04_SQ004_K13_R root, 3 week, salt-stressed, cv Optic, EBro04 Hordeum vulgare subsp. vulgare cDNA clone EBro04_SQ004_K13 5', mRNA sequence. Length=207 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 170 TAGTGATCTAAACGCTCTTA 189 >gb|BQ656484.1| HA04F01u HA Hordeum vulgare subsp. vulgare cDNA clone HA04F01 3-PRIME, mRNA sequence. Length=422 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 352 TAGTGATCTAAACGCTCTTA 371 >gb|BQ458760.1| HA04F01r HA Hordeum vulgare subsp. vulgare cDNA clone HA04F01 5-PRIME, mRNA sequence. Length=422 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 71 TAGTGATCTAAACGCTCTTA 52 >emb|AJ484964.1| AJ484964 S00011 Hordeum vulgare cDNA clone S0001100144F12F1, mRNA sequence. Length=240 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 212 TAGTGATCTAAACGCTCTTA 193 >emb|AJ484963.1| AJ484963 S00011 Hordeum vulgare cDNA clone S0001100068F08F1, mRNA sequence. Length=360 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 212 TAGTGATCTAAACGCTCTTA 193 >dbj|BJ461877.1| BJ461877 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak21b05 3', mRNA sequence. Length=608 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 178 TAGTGATCTAAACGCTCTTA 197 >dbj|BJ455329.1| BJ455329 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak16f17 3', mRNA sequence. Length=541 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 77 TAGTGATCTAAACGCTCTTA 58 >dbj|BJ448740.1| BJ448740 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak21b05 5', mRNA sequence. Length=630 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 430 TAGTGATCTAAACGCTCTTA 411 >dbj|BJ447578.1| BJ447578 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak16f17 5', mRNA sequence. Length=553 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 460 TAGTGATCTAAACGCTCTTA 479 >dbj|AV928265.1| AV928265 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd27k19 3', mRNA sequence. Length=690 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 23 TAGTGATCTAAACGCTCTTA 4 >dbj|AV927890.1| AV927890 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd13c05 3', mRNA sequence. Length=652 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 450 TAGTGATCTAAACGCTCTTA 469 >dbj|AV918531.1| AV918531 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags21g02 3', mRNA sequence. Length=605 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 422 TAGTGATCTAAACGCTCTTA 441 >dbj|AV912245.1| AV912245 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak3a04 3', mRNA sequence. Length=308 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 55 TAGTGATCTAAACGCTCTTA 36 >dbj|AV910077.1| AV910077 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak3a04 5', mRNA sequence. Length=332 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 216 TAGTGATCTAAACGCTCTTA 235 >gb|BI956127.1| HVSMEm0025M04f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0025M04f, mRNA sequence. Length=666 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 256 TAGTGATCTAAACGCTCTTA 275 >dbj|AV836141.1| AV836141 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves adult, heading stage Hordeum vulgare subsp. spontaneum cDNA clone bah37e13, mRNA sequence. Length=518 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 161 TAGTGATCTAAACGCTCTTA 180 >gb|BE216561.2| HV_CEb0010N04f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0010N04f, mRNA sequence. Length=904 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTTA 22 |||||||||||||||||||| Sbjct 568 TAGTGATCTAAACGCTCTTA 549 >gb|GH222673.1| HVSMEk0016H18r2 Hordeum vulgare testa/pericarp cDNA library HVSMEk (HVcDNA0013)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0034N11f, mRNA sequence. Length=460 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||| ||||||| Sbjct 64 AGTAGTGATCTAAATGCTCTTA 85 >gb|FD524111.1| RUS72B02w HF Hordeum vulgare subsp. vulgare cDNA clone HF17I01, mRNA sequence. Length=688 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 4 AGTGATCTAAACGCTCTTA 22 ||||||||||||||||||| Sbjct 167 AGTGATCTAAACGCTCTTA 185 >gb|FD523912.1| RUS69C11w HF Hordeum vulgare subsp. vulgare cDNA clone HF15M06, mRNA sequence. Length=323 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||| ||||||||||||| Sbjct 53 AGTAGTGAGCTAAACGCTCTTA 32 >gb|FD518089.1| RUS51A09w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB29L18, mRNA sequence. Length=409 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||||||||| |||||| Sbjct 322 AGTAGTGATCTAAACACTCTTA 301 >gb|EX599546.1| HDP02O14w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP02O14, mRNA sequence. Length=479 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||| ||||||||||||||||| Sbjct 430 AGTAATGATCTAAACGCTCTTA 409 >gb|EX599545.1| HDP02O14T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP02O14, mRNA sequence. Length=440 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||| ||||||||||||||||| Sbjct 45 AGTAATGATCTAAACGCTCTTA 66 >gb|EX586433.1| HDP03O21w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03O21, mRNA sequence. Length=547 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||||| ||||| Sbjct 84 AGTAGTGATCTAAACGTTCTTA 105 >gb|EX592001.1| HDP03O21T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03O21, mRNA sequence. Length=508 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||||| ||||| Sbjct 455 AGTAGTGATCTAAACGTTCTTA 434 >dbj|BY847400.1| BY847400 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart42e08 5', mRNA sequence. Length=515 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTC 19 ||||||||||||||||||| Sbjct 87 AGTAGTGATCTAAACGCTC 69 >dbj|BY876909.1| BY876909 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl41g01 3', mRNA sequence. Length=451 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||||||||| |||||| Sbjct 240 AGTAGTGATCTAAACACTCTTA 219 >dbj|BY875474.1| BY875474 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl19g01 3', mRNA sequence. Length=344 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||||||||| |||||| Sbjct 226 AGTAGTGATCTAAACACTCTTA 205 >gb|CB866792.1| HC06B09w CH Hordeum vulgare cDNA clone HC06B09 5-PRIME, mRNA sequence. Length=671 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||| ||||||||||||||||| Sbjct 536 AGTAATGATCTAAACGCTCTTA 515 >gb|CA006505.1| HU13J19u HU Hordeum vulgare subsp. vulgare cDNA clone HU13J19 3-PRIME, mRNA sequence. Length=338 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||| ||||||||||||| Sbjct 135 AGTAGTGAGCTAAACGCTCTTA 114 >gb|BU987786.1| HF15M06r HF Hordeum vulgare subsp. vulgare cDNA clone HF15M06 5-PRIME, mRNA sequence. Length=376 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||| ||||||||||||| Sbjct 303 AGTAGTGAGCTAAACGCTCTTA 324 >gb|BU974982.1| HB29L18r BC Hordeum vulgare subsp. vulgare cDNA clone HB29L18 5-PRIME, mRNA sequence. Length=441 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||||||||| |||||| Sbjct 120 AGTAGTGATCTAAACACTCTTA 141 >gb|BU970654.1| HB15E18r BC Hordeum vulgare subsp. vulgare cDNA clone HB15E18 5-PRIME, mRNA sequence. Length=538 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Plus Query 3 TAGTGATCTAAACGCTCTT 21 ||||||||||||||||||| Sbjct 520 TAGTGATCTAAACGCTCTT 538 >emb|AJ475374.1| AJ475374 S00008 Hordeum vulgare cDNA clone S0000800104H03F1, mRNA sequence. Length=420 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||||||||||| ||||| Sbjct 181 AGTAGTGATCTAAACGATCTTA 160 >dbj|BJ482541.1| BJ482541 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah40a01 3', mRNA sequence. Length=542 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 ||||||||| |||||||||||| Sbjct 55 AGTAGTGATTTAAACGCTCTTA 76 >dbj|BJ482407.1| BJ482407 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah35c03 3', mRNA sequence. Length=265 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Minus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||| ||||||||||||| Sbjct 33 AGTAGTGAGCTAAACGCTCTTA 12 >gb|BM816030.1| HC109G05_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC109G05_T3.ab1 similar to Glucokinase,Calcium/calmodulin-dependent protein kinase,Protein C (activated),Protein kinase,, mRNA sequence. Length=907 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTT 21 ||||||||||||||||||| Sbjct 112 TAGTGATCTAAACGCTCTT 94 >gb|BM816024.1| HC03A03_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC03A03_T3.ab1 similar to Glucokinase,Calcium/calmodulin-dependent protein kinase,Protein C (activated),Protein kinase,, mRNA sequence. Length=808 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTT 21 ||||||||||||||||||| Sbjct 334 TAGTGATCTAAACGCTCTT 316 >dbj|AV944995.1| AV944995 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah24g14 3', mRNA sequence. Length=245 Score = 35.6 bits (38), Expect = 0.016 Identities = 19/19 (100%), Gaps = 0/19 (0%) Strand=Plus/Minus Query 3 TAGTGATCTAAACGCTCTT 21 ||||||||||||||||||| Sbjct 19 TAGTGATCTAAACGCTCTT 1 >gb|BM100883.1| EBpi01_SQ002_E09_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulgare cDNA clone EBpi01_SQ002_E09 5', mRNA sequence. Length=260 Score = 35.6 bits (38), Expect = 0.016 Identities = 21/22 (95%), Gaps = 0/22 (0%) Strand=Plus/Plus Query 1 AGTAGTGATCTAAACGCTCTTA 22 |||||||| ||||||||||||| Sbjct 127 AGTAGTGAGCTAAACGCTCTTA 148 >gb|CX630268.1| GW002A05r GW Hordeum vulgare cDNA clone GW002A05 5-PRIME, mRNA sequence. Length=619 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 GTAGTGATCTAAACGCTCTTA 22 ||||||||||||||||| ||| Sbjct 573 GTAGTGATCTAAACGCTTTTA 593 >gb|CX628296.1| GBN007N10u GBN Hordeum vulgare cDNA clone GBN007N10 3-PRIME, mRNA sequence. Length=260 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 GTGATCTAAACGCTCTTA 22 |||||||||||||||||| Sbjct 186 GTGATCTAAACGCTCTTA 203 >gb|BM443417.2| EBro02_SQ005_A20_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone EBro02_SQ005_A20 5', mRNA sequence. Length=561 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 GTGATCTAAACGCTCTTA 22 |||||||||||||||||| Sbjct 533 GTGATCTAAACGCTCTTA 550 >dbj|BJ462560.1| BJ462560 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags29c08 5', mRNA sequence. Length=589 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 5 GTGATCTAAACGCTCTTA 22 |||||||||||||||||| Sbjct 91 GTGATCTAAACGCTCTTA 108 >dbj|AV934721.1| AV934721 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal1g06 3', mRNA sequence. Length=694 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 5 GTGATCTAAACGCTCTTA 22 |||||||||||||||||| Sbjct 49 GTGATCTAAACGCTCTTA 32 Query= tae-miR1122 MIMAT0005357 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|FD518678.1| RUS30C07w HB (Hordeum vulgare cv. Barke) Horde... 37.4 0.004 gb|DN157625.1| GCN001O04u GCN Hordeum vulgare cDNA clone GCN0... 37.4 0.004 gb|EX593109.1| HDP41B11w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BY876819.1| BY876819 Germination shoots Hordeum vulgare s... 33.7 0.055 ALIGNMENTS >gb|FD518678.1| RUS30C07w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB04N17, mRNA sequence. Length=608 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TAGATACATCCGTATCTAGA 20 |||||||||||||||||||| Sbjct 82 TAGATACATCCGTATCTAGA 101 >gb|DN157625.1| GCN001O04u GCN Hordeum vulgare cDNA clone GCN001O04 3-PRIME, mRNA sequence. Length=693 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TAGATACATCCGTATCTAGA 20 |||||||||||||||||||| Sbjct 266 TAGATACATCCGTATCTAGA 247 >gb|EX593109.1| HDP41B11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP41B11, mRNA sequence. Length=690 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TAGATACATCCGTATCTA 18 |||||||||||||||||| Sbjct 645 TAGATACATCCGTATCTA 662 >dbj|BY876819.1| BY876819 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl40g05 3', mRNA sequence. Length=461 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGATACATCCGTATCTA 18 |||||||||||||||||| Sbjct 164 TAGATACATCCGTATCTA 147 Query= tae-miR1136 MIMAT0005371 Length=24 Score E Sequences producing significant alignments: (Bits) Value dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv... 35.6 0.016 dbj|BJ545549.1| BJ545549 K. Sato unpublished cDNA library, cv... 35.6 0.016 gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDN... 35.6 0.016 dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv... 35.6 0.016 ALIGNMENTS >dbj|BJ546620.1| BJ546620 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak44n10 3', mRNA sequence. Length=726 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TTGTCGCAGGTATGGATGTATCTA 24 |||||| ||| ||||||||||||| Sbjct 136 TTGTCGAAGGAATGGATGTATCTA 113 >dbj|BJ545549.1| BJ545549 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak18b17 3', mRNA sequence. Length=660 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TTGTCGCAGGTATGGATGTATCTA 24 |||||| ||| ||||||||||||| Sbjct 125 TTGTCGAAGGAATGGATGTATCTA 102 >gb|BU978892.1| HA14J03r HA Hordeum vulgare subsp. vulgare cDNA clone HA14J03 5-PRIME, mRNA sequence. Length=547 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Plus Query 1 TTGTCGCAGGTATGGATGTATCTA 24 |||||| ||| ||||||||||||| Sbjct 374 TTGTCGGAGGAATGGATGTATCTA 397 >dbj|AV912559.1| AV912559 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak4h20 3', mRNA sequence. Length=592 Score = 35.6 bits (38), Expect = 0.016 Identities = 22/24 (91%), Gaps = 0/24 (0%) Strand=Plus/Minus Query 1 TTGTCGCAGGTATGGATGTATCTA 24 |||||| ||| ||||||||||||| Sbjct 131 TTGTCGAAGGAATGGATGTATCTA 108 Query= tae-miR1137 MIMAT0005372 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|EX595424.1| HDP27N15T HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 gb|EX595419.1| HDP27N15w HDP Hordeum vulgare subsp. vulgare c... 33.7 0.055 dbj|BJ475341.1| BJ475341 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ474657.1| BJ474657 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ474050.1| BJ474050 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|BJ473864.1| BJ473864 K. Sato unpublished cDNA library, cv... 33.7 0.055 dbj|AV936793.1| AV936793 K. Sato unpublished cDNA library, cv... 33.7 0.055 ALIGNMENTS >gb|EX595424.1| HDP27N15T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27N15, mRNA sequence. Length=544 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 345 TAGTACAAAGTTGAGTCA 362 >gb|EX595419.1| HDP27N15w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP27N15, mRNA sequence. Length=578 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 231 TAGTACAAAGTTGAGTCA 214 >dbj|BJ475341.1| BJ475341 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal25a09 3', mRNA sequence. Length=619 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 94 TAGTACAAAGTTGAGTCA 77 >dbj|BJ474657.1| BJ474657 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal20h06 3', mRNA sequence. Length=655 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 94 TAGTACAAAGTTGAGTCA 77 >dbj|BJ474050.1| BJ474050 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal18j13 3', mRNA sequence. Length=652 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 96 TAGTACAAAGTTGAGTCA 79 >dbj|BJ473864.1| BJ473864 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal17g13 3', mRNA sequence. Length=670 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 96 TAGTACAAAGTTGAGTCA 79 >dbj|AV936793.1| AV936793 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal7d19 3', mRNA sequence. Length=678 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Minus Query 1 TAGTACAAAGTTGAGTCA 18 |||||||||||||||||| Sbjct 95 TAGTACAAAGTTGAGTCA 78 Query= zma-miR171f MIMAT0001695 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= zma-miR396d MIMAT0010077 Length=22 Score E Sequences producing significant alignments: (Bits) Value dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv... 39.2 0.001 gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare c... 37.4 0.004 gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24... 37.4 0.004 gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08... 37.4 0.004 gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis sp... 37.4 0.004 gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST libr... 37.4 0.004 ALIGNMENTS >dbj|AV925436.1| AV925436 K. Sato unpublished cDNA library, cv. Haruna Nijo second leaf stage seedling leaves Hordeum vulgare subsp. vulgare cDNA clone basd24d08 5', mRNA sequence. Length=654 Score = 39.2 bits (42), Expect = 0.001 Identities = 21/21 (100%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 2 TCCACAGGCTTTCTTGAACTG 22 ||||||||||||||||||||| Sbjct 13 TCCACAGGCTTTCTTGAACTG 33 >gb|EX583134.1| HDP09M03w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP09M03, mRNA sequence. Length=681 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 141 TTCCACAGGCTTTCTTGAAC 122 >gb|CB861140.1| HH02A24w HH Hordeum vulgare cDNA clone HH02A24 5-PRIME, mRNA sequence. Length=656 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 414 TTCCACAGGCTTTCTTGAAC 395 >gb|CB860915.1| HH03P08w HH Hordeum vulgare cDNA clone HH03P08 5-PRIME, mRNA sequence. Length=465 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 119 TTCCACAGGCTTTCTTGAAC 100 >gb|CA031383.1| HX09M20r HX Hordeum vulgare subsp. vulgare cDNA clone HX09M20 5-PRIME, mRNA sequence. Length=633 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 535 TTCCACAGGCTTTCTTGAAC 516 >gb|CA029723.1| HX05A15r HX Hordeum vulgare subsp. vulgare cDNA clone HX05A15 5-PRIME, mRNA sequence. Length=640 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 557 TTCCACAGGCTTTCTTGAAC 538 >gb|CA026441.1| HZ55O21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O21 5-PRIME, mRNA sequence. Length=271 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 160 TTCCACAGGCTTTCTTGAAC 141 >gb|BQ665746.1| HX04P12u HX Hordeum vulgare subsp. vulgare cDNA clone HX04P12 3-PRIME, mRNA sequence. Length=476 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 279 TTCCACAGGCTTTCTTGAAC 298 >gb|BQ660731.1| HI05C18u HI Hordeum vulgare subsp. vulgare cDNA clone HI05C18 3-PRIME, mRNA sequence. Length=480 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Plus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 279 TTCCACAGGCTTTCTTGAAC 298 >gb|BQ470551.1| HX03F05r HX Hordeum vulgare subsp. vulgare cDNA clone HX03F05 5-PRIME, mRNA sequence. Length=658 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 310 TTCCACAGGCTTTCTTGAAC 291 >gb|BE455467.3| HVSMEg0017E21f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0017E21f, mRNA sequence. Length=584 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 86 TTCCACAGGCTTTCTTGAAC 67 >gb|BI958861.1| HVSMEn0016O19f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016O19f, mRNA sequence. Length=641 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TTCCACAGGCTTTCTTGAAC 20 |||||||||||||||||||| Sbjct 278 TTCCACAGGCTTTCTTGAAC 259 Query= zma-miR171a MIMAT0001385 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDN... 37.4 0.004 ALIGNMENTS >gb|BQ461013.1| HE01H10r HE Hordeum vulgare subsp. vulgare cDNA clone HE01H10 5-PRIME, mRNA sequence. Length=446 Score = 37.4 bits (40), Expect = 0.004 Identities = 20/20 (100%), Gaps = 0/20 (0%) Strand=Plus/Minus Query 1 TGATTGAGCCGCGCCAATAT 20 |||||||||||||||||||| Sbjct 259 TGATTGAGCCGCGCCAATAT 240 Query= zma-miR171b MIMAT0001386 Length=20 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 18/18 (100%), Gaps = 0/18 (0%) Strand=Plus/Plus Query 1 TTGAGCCGTGCCAATATC 18 |||||||||||||||||| Sbjct 397 TTGAGCCGTGCCAATATC 414 Query= zma-miR171c MIMAT0001737 Length=21 Score E Sequences producing significant alignments: (Bits) Value gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDN... 33.7 0.055 ALIGNMENTS >gb|CA009309.1| HU13M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13M08 5-PRIME, mRNA sequence. Length=621 Score = 33.7 bits (36), Expect = 0.055 Identities = 20/21 (95%), Gaps = 0/21 (0%) Strand=Plus/Plus Query 1 TGACTGAGCCGTGCCAATATC 21 ||| ||||||||||||||||| Sbjct 394 TGATTGAGCCGTGCCAATATC 414 Database: GenBank non-mouse and non-human EST entries Posted date: Jun 2, 2009 5:51 PM Number of letters in database: 272,552,168 Number of sequences in database: 525,527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Matrix: blastn matrix:2 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 525527 Number of Hits to DB: 63099674 Number of extensions: 47491233 Number of successful extensions: 1022939 Number of sequences better than 0.1: 95 Number of HSP's better than 0.1 without gapping: 0 Number of HSP's gapped: 1022928 Number of HSP's successfully gapped: 132 Length of database: 272552168 A: 0 X1: 20 (18.3 bits) X2: 33 (29.8 bits) X3: 110 (99.2 bits) S1: 20 (19.3 bits)