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["Additional file 1. Table S1. Summary of the MYB transcription factor genes in soybean. The MYB transcription factor encoding genes identiﬁed from soybean in this study are listed according to the system of GJI. "]
["Proteins","Locus name","Alternative splicing events","MYBs expressed in nodulation"]
["GmMYB001","Glyma19g40650.1"]
["GmMYB002","Glyma06g00630.1",2,"predicted with low expression"]
[null,"Glyma06g00630.2"]
["GmMYB003","Glyma11g05550.1",null,"predicted with high expression"]
["GmMYB004","Glyma13g05370.1"]
["GmMYB005","Glyma12g03600.1"]
["GmMYB006","Glyma06g16820.1",null,"predicted with high expression"]
["GmMYB007","Glyma18g49360.1",null,"predicted with high expression"]
["GmMYB008","Glyma18g49670.1"]
["GmMYB009","Glyma19g41010.1"]
["GmMYB010","Glyma01g02070.1"]
["GmMYB011","Glyma04g04490.1",null,"predicted with low expression"]
["GmMYB012","Glyma17g35620.1",null,"predicted with high expression"]
["GmMYB013","Glyma13g01200.1",null,"predicted with high expression"]
["GmMYB014","Glyma17g04170.1"]
["GmMYB015","Glyma13g07020.1"]
["GmMYB016","Glyma02g01300.1",null,"predicted with high expression"]
["GmMYB017","Glyma13g32090.1"]
["GmMYB018","Glyma19g36830.1",null,"predicted with high expression"]
["GmMYB019","Glyma14g09540.1",null,"predicted with high expression"]
["GmMYB020","Glyma15g03920.1"]
["GmMYB021","Glyma05g35050.1"]
["GmMYB022","Glyma03g41100.1"]
["GmMYB023","Glyma20g22230.1"]
["GmMYB024","Glyma16g02570.1",null,"predicted with low expression"]
["GmMYB025","Glyma20g29710.1"]
["GmMYB026","Glyma19g14230.1"]
["GmMYB027","Glyma05g08690.1"]
["GmMYB028","Glyma15g14620.1",2]
[null,"Glyma15g14620.2"]
["GmMYB029","Glyma12g01960.1",null,"predicted with low expression"]
["GmMYB030","Glyma03g19030.1",null,"predicted with low expression"]
["GmMYB031","Glyma10g01330.1"]
["GmMYB032","Glyma01g39740.1",null,"predicted with high expression"]
["GmMYB033","Glyma07g04210.1"]
["GmMYB034","Glyma06g45540.1",null,"predicted with low expression"]
["GmMYB035","Glyma12g11390.1",null,"predicted with low expression"]
["GmMYB036","Glyma06g04010.1",null,"predicted with high expression"]
["GmMYB037","Glyma13g40830.1",3,"predicted with high expression"]
[null,"Glyma13g40830.2"]
[null,"Glyma13g40830.3"]
["GmMYB038","Glyma03g34110.1",null,"predicted with high expression"]
["GmMYB039","Glyma03g38660.1"]
["GmMYB040","Glyma06g05260.1",null,"predicted with low expression"]
["GmMYB041","Glyma05g21220.1",null,"predicted with high expression"]
["GmMYB042","Glyma11g11450.1",null,"predicted with high expression"]
["GmMYB043","Glyma19g14270.1"]
["GmMYB044","Glyma08g04670.1"]
["GmMYB045","Glyma19g44660.1",null,"predicted with low expression"]
["GmMYB046","Glyma19g02600.1"]
["GmMYB047","Glyma01g41610.1"]
["GmMYB048","Glyma01g09280.1"]
["GmMYB049","Glyma01g26650.1",null,"predicted with high expression"]
["GmMYB050","Glyma01g44370.1"]
["GmMYB051","Glyma02g02310.1",null,"predicted with low expression"]
["GmMYB052","Glyma02g12260.1"]
["GmMYB053","Glyma02g13770.1"]
["GmMYB054","Glyma04g11040.1",null,"predicted with low expression"]
["GmMYB055","Glyma04g15150.1"]
["GmMYB056","Glyma04g42110.1"]
["GmMYB057","Glyma05g02550.1"]
["GmMYB058","Glyma05g04900.1"]
["GmMYB059","Glyma06g10840.1",null,"predicted with low expression"]
["GmMYB060","Glyma06g12690.1"]
["GmMYB061","Glyma06g45460.1"]
["GmMYB062","Glyma06g45550.1",null,"predicted with high expression"]
["GmMYB063","Glyma07g35560.1"]
["GmMYB064","Glyma08g06440.1",null,"predicted with low expression"]
["GmMYB065","Glyma08g17370.1"]
["GmMYB066","Glyma08g17860.1"]
["GmMYB067","Glyma08g40950.1"]
["GmMYB068","Glyma09g29940.1"]
["GmMYB069","Glyma09g33870.1"]
["GmMYB070","Glyma09g37040.1"]
["GmMYB071","Glyma10g38090.1"]
["GmMYB072","Glyma11g01150.1"]
["GmMYB073","Glyma11g11570.1"]
["GmMYB074","Glyma11g15180.1",5]
[null,"Glyma11g15180.2"]
[null,"Glyma11g15180.3"]
[null,"Glyma11g15180.4"]
[null,"Glyma11g15180.5"]
["GmMYB075","Glyma12g31950.1"]
["GmMYB076","Glyma12g32610.1"]
["GmMYB077","Glyma13g05550.1"]
["GmMYB078","Glyma13g09010.1"]
["GmMYB079","Glyma13g35810.1",null,"predicted with low expression"]
["GmMYB080","Glyma18g49690.1"]
["GmMYB081","Glyma14g06870.1",null,"predicted with low expression"]
["GmMYB082","Glyma15g04620.1",4,"predicted with low expression"]
[null,"Glyma15g04620.2"]
[null,"Glyma15g04620.3"]
[null,"Glyma15g04620.4"]
["GmMYB083","Glyma15g07230.1"]
["GmMYB084","Glyma15g35860.1"]
["GmMYB085","Glyma15g41810.1"]
["GmMYB086","Glyma16g13440.1"]
["GmMYB087","Glyma16g34490.1"]
["GmMYB088","Glyma18g07360.1"]
["GmMYB089","Glyma18g07960.1",null,"predicted with low expression"]
["GmMYB090","Glyma18g10920.1"]
["GmMYB091","Glyma18g16040.1"]
["GmMYB092","Glyma18g49630.1"]
["GmMYB093","Glyma19g02890.1"]
["GmMYB094","Glyma19g41250.1"]
["GmMYB095","Glyma20g29730.1"]
["GmMYB096","Glyma19g02980.1"]
["GmMYB097","Glyma01g42050.1",null,"predicted with low expression"]
["GmMYB098","Glyma02g41180.1"]
["GmMYB099","Glyma03g38040.1"]
["GmMYB100","Glyma04g26650.1"]
["GmMYB101","Glyma05g03780.1",null,"predicted with low expression"]
["GmMYB102","Glyma07g01050.1"]
["GmMYB103","Glyma07g05960.1",null,"predicted with high expression"]
["GmMYB104","Glyma07g10320.1"]
["GmMYB105","Glyma07g36430.1"]
["GmMYB106","Glyma08g00810.1"]
["GmMYB107","Glyma08g20440.1"]
["GmMYB108","Glyma08g27660.1",2]
[null,"Glyma08g27660.2"]
["GmMYB109","Glyma08g42960.1"]
["GmMYB110","Glyma09g03690.1",null,"predicted with low expression"]
["GmMYB111","Glyma09g31570.1"]
["GmMYB112","Glyma10g01340.1"]
["GmMYB113","Glyma10g33450.1"]
["GmMYB114","Glyma11g03300.1",null,"predicted with low expression"]
["GmMYB115","Glyma11g03770.1"]
["GmMYB116","Glyma11g33620.1"]
["GmMYB117","Glyma12g34650.1",null,"predicted with low expression"]
["GmMYB118","Glyma12g36630.1"]
["GmMYB119","Glyma13g04920.1"]
["GmMYB120","Glyma13g20880.1"]
["GmMYB121","Glyma13g42430.1"]
["GmMYB122","Glyma14g39530.1"]
["GmMYB123","Glyma15g41250.1"]
["GmMYB124","Glyma16g06900.1"]
["GmMYB125","Glyma16g07960.1"]
["GmMYB126","Glyma17g14290.1",2]
[null,"Glyma17g14290.2"]
["GmMYB127","Glyma17g15270.1"]
["GmMYB128","Glyma17g17560.1"]
["GmMYB129","Glyma18g04580.1",null,"predicted with low expression"]
["GmMYB130","Glyma19g00930.1"]
["GmMYB131","Glyma19g02090.1"]
["GmMYB132","Glyma19g34740.1"]
["GmMYB133","Glyma19g40670.1"]
["GmMYB134","Glyma19g43740.1"]
["GmMYB135","Glyma20g20980.1"]
["GmMYB136","Glyma20g32510.1"]
["GmMYB137","Glyma0041s00310.1"]
["GmMYB138","Glyma01g05190.1"]
["GmMYB139","Glyma01g40410.1"]
["GmMYB140","Glyma04g00550.1",2]
[null,"Glyma04g00550.2"]
["GmMYB141","Glyma04g38240.1",null,"predicted with high expression"]
["GmMYB142","Glyma06g45520.1"]
["GmMYB143","Glyma07g14480.1"]
["GmMYB144","Glyma08g44950.1"]
["GmMYB145","Glyma09g25590.1"]
["GmMYB146","Glyma10g06680.1"]
["GmMYB147","Glyma10g30870.1",null,"predicted with high expression"]
["GmMYB148","Glyma10g38110.1"]
["GmMYB149","Glyma12g11490.1"]
["GmMYB150","Glyma12g32530.1"]
["GmMYB151","Glyma18g39760.1",null,"predicted with low expression"]
["GmMYB152","Glyma16g31280.1",2]
[null,"Glyma16g31280.2"]
["GmMYB153","Glyma17g10820.1"]
["GmMYB154","Glyma18g26600.1"]
["GmMYB155","Glyma18g41520.1"]
["GmMYB156","Glyma20g36600.1",2,"predicted with high expression"]
[null,"Glyma20g36600.2"]
["GmMYB157","Glyma06g21040.1"]
["GmMYB158","Glyma02g00820.1",null,"predicted with low expression"]
["GmMYB159","Glyma10g00930.1"]
["GmMYB160","Glyma03g00890.1"]
["GmMYB161","Glyma04g05170.1",null,"predicted with low expression"]
["GmMYB162","Glyma06g18830.1"]
["GmMYB163","Glyma08g02080.1"]
["GmMYB164","Glyma10g06190.1",null,"predicted with high expression"]
["GmMYB165","Glyma11g02400.1"]
["GmMYB166","Glyma11g19980.1",null,"predicted with high expression"]
["GmMYB167","Glyma13g39760.1"]
["GmMYB168","Glyma17g16980.1",null,"predicted with low expression"]
["GmMYB169","Glyma18g46480.1"]
["GmMYB170","Glyma02g41440.1"]
["GmMYB171","Glyma04g33210.1 "]
["GmMYB172","Glyma04g33720.1 "]
["GmMYB173","Glyma06g20800.1 "]
["GmMYB174","Glyma07g37140.1"]
["GmMYB175","Glyma10g35050.1 "]
["GmMYB176","Glyma19g40250.1 "]
["GmMYB177","Glyma20g01610.1"]
["GmMYB178","Glyma20g32500.1 "]
["GmMYB179","Glyma12g06180.1 "]
["GmMYB180","Glyma13g27310.1 "]
["GmMYB181","Glyma13g38520.1 "]
["GmMYB182","Glyma19g05080.1"]
["GmMYB183","Glyma20g34140.1 "]
["GmMYB184","Glyma02g00960.1 "]
["GmMYB185","Glyma03g38410.1 "]
["GmMYB186","Glyma04g36110.1 "]
["GmMYB187","Glyma12g15290.1 "]
["GmMYB188","Glyma13g41470.1 "]
["GmMYB189","Glyma17g09310.1 "]
["GmMYB190","Glyma03g37640.1"]
["GmMYB191","Glyma07g04240.1 "]
["GmMYB192","Glyma07g16980.1 "]
["GmMYB193","Glyma13g16890.1 "]
["GmMYB194","Glyma15g19360.1",2]
[null,"Glyma15g19360.2"]
["GmMYB195","Glyma16g00920.1"]
["GmMYB196","Glyma07g07960.1"]
["GmMYB197","Glyma09g04370.1"]
["GmMYB198","Glyma15g15400.1"]
["GmMYB199","Glyma10g30860.1"]
["GmMYB200","Glyma02g01740.1"]
["GmMYB201","Glyma03g31980.1",null,"predicted with low expression"]
["GmMYB202","Glyma11g14200.1"]
["GmMYB203","Glyma14g07510.1"]
["GmMYB204","Glyma17g03480.1"]
["GmMYB205","Glyma17g05830.1"]
["GmMYB206","Glyma03g01540.1"]
["GmMYB207","Glyma05g01080.1"]
["GmMYB208","Glyma05g23080.1"]
["GmMYB209","Glyma05g37460.1"]
["GmMYB210","Glyma07g30860.1"]
["GmMYB211","Glyma07g33960.1"]
["GmMYB212","Glyma09g39720.1"]
["GmMYB213","Glyma10g27940.1"]
["GmMYB214","Glyma10g28250.1"]
["GmMYB215","Glyma10g32410.1",null,"predicted with high expression"]
["GmMYB216","Glyma12g08480.1",null,"predicted with low expression"]
["GmMYB217","Glyma12g30140.1",null,"predicted with low expression"]
["GmMYB218","Glyma13g20510.1",null,"predicted with low expression"]
["GmMYB219","Glyma14g10340.1",null,"predicted with high expression"]
["GmMYB220","Glyma17g07330.1",null,"predicted with high expression"]
["GmMYB221","Glyma17g35020.1"]
["GmMYB222","Glyma19g29750.1"]
["GmMYB223","Glyma20g35180.1",null,"predicted with high expression"]
["GmMYB224","Glyma07g15250.1"]
["GmMYB225","Glyma05g36120.1"]
["GmMYB226","Glyma03g38070.1"]
["GmMYB227","Glyma09g36990.1"]
["GmMYB228","Glyma02g12100.1"]
["GmMYB229","Glyma02g39070.1"]
["GmMYB230","Glyma03g00980.1",null,"predicted with high expression"]
["GmMYB231","Glyma04g03910.1",null,"predicted with high expression"]
["GmMYB232","Glyma01g43120.1"]
["GmMYB233","Glyma06g45570.1"]
["GmMYB234","Glyma06g19280.1"]
["GmMYB235","Glyma14g37140.1"]
["GmMYB236","Glyma19g29670.1",null,"predicted with high expression"]
["GmMYB237","Glyma07g15820.1",3,"predicted with high expression"]
[null,"Glyma07g15820.2"]
[null,"Glyma07g15820.3"]
["GmMYB238","Glyma19g07830.1"]
["GmMYB239","Glyma05g06410.1"]
["GmMYB240","Glyma07g15850.1"]
["GmMYB241","Glyma09g37010.1"]
["GmMYB242","Glyma13g37820.1"]
["GmMYB243","Glyma06g38340.1"]
["GmMYB244","Glyma15g14190.1"]
["GmMYB3R-1 ","Glyma18g39740.1",null,"predicted with low expression"]
["GmMYB3R-2 ","Glyma17g26240.1",null,"predicted with low expression"]
["GmMYB3R-3","Glyma03g19470.1"]
["GmMYB3R-4","Glyma01g42650.1",null,"predicted with low expression"]
["GmMYB3R-5 ","Glyma04g08550.1"]
["GmMYB3R-6 ","Glyma06g08660.1",null,"predicted with low expression"]
["GmMYB4R-1 ","Glyma09g30900.1",null,"predicted with high expression"]
["GmMYB4R-2 ","Glyma07g11330.1",null,"predicted with high expression"]
[null,"Glyma01g05980.1","Incomplete open reading frame (OFR)"]
[null,"Glyma02g42030.1","Incomplete ORF"]
[null,"Glyma02g43280.1","Incomplete ORF"]
[null,"Glyma03g15810.1","Incomplete ORF"]
[null,"Glyma03g15870.1","Incomplete ORF"]
[null,"Glyma03g15930.1","Incomplete ORF"]
[null,"Glyma05g02300.1","Incomplete ORF"]
[null,"Glyma06g38340.1","Incomplete ORF"]
[null,"Glyma06g47000.1","Incomplete ORF"]
[null,"Glyma09g37010.1","Incomplete ORF"]
[null,"Glyma10g41930.1","Incomplete ORF"]
[null,"Glyma10g26680.1","Incomplete ORF"]
[null,"Glyma10g41930.1","Incomplete ORF"]
[null,"Glyma13g04030.1","Incomplete ORF"]
[null,"Glyma13g09980.1","Incomplete ORF"]
[null,"Glyma14g24500.1","Incomplete ORF"]
[null,"Glyma14g06320.1","Incomplete ORF"]
[null,"Glyma15g14190.1","Incomplete ORF"]
[null,"Glyma17g36370.1","Incomplete ORF"]
[null,"Glyma17g09640.1","Incomplete ORF"]
[null,"Glyma19g13990.1","Incomplete ORF"]
[null,"Glyma20g04240.1","Incomplete ORF"]
[null,"Glyma20g11040.1","Incomplete ORF"]
[null,"Glyma20g04510.1","Incomplete ORF"]
[null,"Glyma20g25110.1","Incomplete ORF"]
[null,"Glyma20g04240.1","Incomplete ORF"]
[null,"Glyma09g37340","low confidence value"]

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