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["Additional file 5 Table S4. Comparative analysis of microsomal proteome datasets from different plants"]
["Identification","Cicer arietinum","Medicago truncatula","Lupinus albus"]
[]
["Serine threonine kinase homolog COK-4",9796478]
["Putative serine/threonine kinase",110289142]
["Phosphoglycerate kinase precursor like",82621134]
["Membrane protein CH1-like",115441379]
["Ferritin","224140479, 255637227","MtC00127, MtC20131"]
["Disease resistance protein (Fragment)",108739945,"MtC10834"]
["Chaperonin 60 alpha subunit","217074850, 3790441"]
["Chaperone DnaK",92870233]
["Putative GloEL protein chaperonin, 60kDa",225435794]
["Chaperonin 60 alpha chain precursor, chloroplast",1710807]
["putative 60S ribosomal protein L1",84468414,null,"60S Ribosomal protein"]
["60S Ribosomal protein L12",null,null,"60S Ribosomal protein L12"]
["60S Ribosomal protein L23a",null,null,"60S Ribosomal protein L23a"]
["60S Ribosomal protein L22-2 (RPL22B)",null,null,"60S Ribosomal protein L22-2 (RPL22B)"]
["Ribosomal protein L13a",null,null,"Ribosomal protein L13a"]
["Putative 60S acidic ribosomal protein P0",84468360]
["40S ribosomal protein S12",255626071]
["40S Ribosomal protein S14",null,null,"40S Ribosomal protein S14"]
["Polyubiquitin",18421671]
["Putative glutamate-tRNA ligase",115443869]
["Mitochondrial processing peptidase beta subunit",12802327,"MtC40075"]
["Cytochrome b6-f complex iron-sulfur subunit",136707]
["Cytochrome P450",15238866]
["Chlorophyll a/b-binding protein AB96",115773]
["Chlorophyll a/b-binding protein 3 precursor",115800]
["Chlorophyll a/b binding protein","3928140, 169124051"]
["Chlorophyll a/b-binding protein type III (Fragment",7271947]
["PSI type III chlorophyll a/b-binding protein [imported]",15219941]
["LHCA3; chlorophyll binding",79320443]
["Putative PSII-P protein",217072770]
["Light-harvesting chlorophyll-a/b binding protein Lhcb1",56809379]
["Glutamine synthetase",12963877,"MtC00744"]
["Fructose-bisphosphate aldolase 1",399024]
["Plastidic aldolase",38096041]
["Fructose-bisphosphate aldolase","84468290, 3913008","MtC00100"]
["Glutamate-ammonia ligase (EC 6.3.1.2) delta precursor",121344]
["Ferredoxin: nadp+ reductase",4930119]
["Carbonic anhydrase","20502881, 8954289"]
["Phosphoribulokinase",1885326]
["Ferredoxin-NADP reductase",125553745]
["Putative quinone oxidoreductase",21068664]
["Ribulose bisphosphate carboxylase large chain","1750362, 10764577, 197294096"]
["Chromosome chr17 scaffold_16",225456471]
["ATPase beta subunit (Fragment)",6467935,null,"ATPase beta subunit"]
["ATP synthase beta subunit ","7708546, 4063542, 197294097, 3850926"]
["ATP synthase",null,"MtC00696 (ATP synthase subunit)","Putative ATP synthase"]
["ATP synthase mitochondrial precursor",null,"MtC00268"]
["ATP synthase subunit alpha",197294119]
["ATP synthase CF1 alpha subunit","289066833, 13518443"]
["ATP synthase subunit beta, chloroplastic",11466372]
["ATP synthase subunit gamma, chloroplast precursor",226533016]
["Glyceraldehyde 3-phosphate dehydrogenase",3413165,"MtC00021.1, MtC00021.2, MtC00030"]
["Glyceraldehyde 3-phosphate dehydrogenase A",120658]
["Putative ferredoxin-NADP(H) oxidoreductase",41052915]
["Activator of spomin",145357734]
["Intronic ORF; similar to LAGLIDADG endonuclease",2943730]
["Dynein-1-alpha heavy chain",159490411]
["H+-transporting two-sector ATPase-alpha chain",114522,null,"H+-transporting two-sector ATPase"]
["Histone acetyltransferase GCN5",18410098]
["Calcineurin-like phosphoesterase family protein",22329383]
["Trypsin inhibitor, chain B - soybean (fragments)",157838208]
["Predicted protein",224119706]
["Actin (Fragment)",111610552,"MtC10470 (Actin/actin like)"]
["OSJNBb0085H11.1 protein",38346013]
["Putative uncharacterized protein",147828109]
["Putative uncharacterized protein",224284512]
["Unknown protein",27497205]
["Unknown protein",15236812]
["Hypothetical protein P0415D04.53",47496995]
["Hypothetical protein F26P21.180",3688187]
["Hypothetical protein OSJNBa0075N02.148",28972006]
["Oxygen-evolving enhancer protein 1",131384]
["Oxygen-evolving enhancer protein 2",131390]
["Beta-1,3-glucanase",116490100]
["Guanine nucleotide-binding protein subunit beta-like",3023847]
["Luminal binding protein, BiP",297742397,null,"BiP-isoform D"]
["Proteasome subunit alpha type",224139394,"MtC30069"]
["Hypothetical protein",null,"MtC20060"]
["Hypothetical protein",null,"MtC10323"]
["Hypothetical protein",null,"MtC10115"]
["Unknown protein UPF0172",null,"MtD09954 (TC88421)"]
["Hypothetical ATP synthase D chain mitochondrial",null,"MtC10319"]
["Vacuolar ATP synthase subunit E",null,"MtC00629"]
["Vacuolar-ATPase subunit C",null,"MtC60189"]
["Vacuolar ATP synthase subunit B",null,"MtC10407"]
["Vacuolar ATP synthase catalytic subunit A (alfa)",null,"MtC20140","Vacuolar ATP synthase catalytic subunit A"]
["Probable 1,4-benzoquinone reductase/TRP repressor binding protein",null,"MtC10046, MtC00067"]
["Probable Cop-coated vesicle membrane protein P24 precursor",null,"MtC10461"]
["Putative carnitine operon protein caie-like",null,"MtC10528"]
["Outer mitochondrial membrane porin",null,"MtC10996"]
["Prohibitin",null,"MtC20367"]
["Outer plastidial membrane protein porin",null,"MtC10204"]
["Hypothetical porin",null,"MtC91290"]
["PR10",null,"MtC00227, MtC10531"]
["Cytochrome c oxidase subunit Vb",null,"MtC60333"]
["Glycine-rich DNA binding protein",null,"MtC00115"]
["Putative fruit-induced CSF-2 protein",null,"MtC10007"]
["Nucleoside diphosphate kinase",null,"MtC00016"]
["Peroxiredoxin",null,"MtC00261"]
["Probable developmentally regulated plasma membrane polypeptide",null,"MtC10091"]
["Probable ethylene-regulated protein",null,"MtC00416"]
["Probable NADH-ubiquinone oxidoreductase",null,"MtC10444, MtC00519, MtC00544"]
["Chalcone–flavanone isomerase",null,"MtD07835 (TC76949)"]
["Probable annexin",null,"MtC30120"]
["Putative seed storage protein",null,"MtC30078"]
["Bacterial transferase hexapeptide repeat protein",null,"MtC60249"]
["Adenylate kinase",null,"MtC00173"]
["Probable protein disulfide isomerase precursor",null,"MtC00417, MtC10403"]
["26S Proteasome regulatory subunit S12",null,"MtC20220"]
["ER-associated hsp40 co-chaperone",null,"MtC00445"]
["Probable cytochrome c reductase-processing peptidase subunit",null,"MtC30030"]
["Biotin/lipoyl attachment protein",null,"MtD04868"]
["Probable NADH-ubiquinone oxidoreductase 75 kDa subunit",null,"MtC00504"]
["Insulinase-like peptidase, familly M16",null,"MtC60672"]
["Probable lectin",null,"MtC10055"]
["Probable cytochrome c reductase-processing peptidase subunit",null,"MtC30030"]
["Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase",null,"MtC00348"]
["Probable ubiquinol-cytochrome c reductase iron–sulfur subunit precursor",null,"MtC50199","Ubiquinol-cytochrome C reductase complex 14 kDa protein, putative"]
["Putative hypothetical protein",null,"MtC30206"]
["Trans-cinnamic acid 4-hydroxylase",null,null,"Trans-cinnamic acid 4-hydroxylase"]
["Histone H4",null,null,"Histone H4"]
["PDR-like ABC-transporter",null,null,"PDR-like ABC-transporter"]
["Clathrin heavy chain",null,null,"Clathrin heavy chain"]
["Aquaporin",null,null,"Aquaporin"]
["Clathrin propeller, N-terminal",null,null,"Clathrin propeller, N-terminal"]
["Glycoprotein-like protein",null,null,"Glycoprotein-like protein"]
["H+ transporting ATPase, proton pump",null,null,"H+ transporting ATPase, proton pump"]
["Orn/DAP/Arg decarboxylase 2; Heat shock protein Hsp70",null,null,"Orn/DAP/Arg decarboxylase 2; Heat shock protein Hsp70"]
["Ly200 protein",null,null,"Ly200 protein"]
["Trans-cinnamate 4-monooxygenase (C4H)",null,null,"Trans-cinnamate 4-monooxygenase (C4H)"]
["Translation elongation factor 1A-5",null,null,"Translation elongation factor 1A-5"]
["Probable aquaporin PIP-type 7a ",null,null,"Probable aquaporin PIP-type 7a "]
["Ubiquitin extension protein",null,null,"Ubiquitin extension protein"]
["Unnamed protein product ",null,null,"Unnamed protein product "]
["Adenosine triphosphatase",null,null,"Adenosine triphosphatase"]
["Adenine nucleotide translocator",null,null,"Adenine nucleotide translocator"]
["F1 ATPase",null,null,"F1 ATPase"]
["AAA ATPase",null,null,"AAA ATPase"]
["Plasma membrane H+ ATPase",null,null,"Plasma membrane H+ ATPase"]
["DDT; Homeodomain-related",null,null,"DDT; Homeodomain-related"]
["Hypothetical protein",null,null,"Hypothetical protein"]
["Heat shock protein Hsp70",null,null,"Heat shock protein Hsp70"]
["Mitochondrial phosphate transporter",null,null,"Mitochondrial phosphate transporter"]
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