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["Gene ontology processes enriched among the down-regulated gene transcripts in the kiwifruit group  (obtained by Limma, p nom<5%)"]
["GO Term","Exact test","Genes in selection","Genes in reference","Enrichment"]
["biological_process","<0.001",196,5901,{"v":2.047,"d":"2.0"}]
["  biological regulation",0.002,18,499,{"v":2.223,"d":"2.2"}]
["          regulation of peptidase activity",0.011,2,8,{"v":15.41,"d":"15.4"}]
["            regulation of endopeptidase activity",0.009,2,7,{"v":17.612,"d":"17.6"}]
["    regulation of biological quality",0.032,11,351,{"v":1.932,"d":"1.9"}]
["              di-, tri-valent inorganic cation homeostasis",0.049,4,82,{"v":3.007,"d":"3.0"}]
["                calcium ion homeostasis",0.031,4,70,{"v":3.522,"d":"3.5"}]
["                  cellular calcium ion homeostasis",0.031,4,70,{"v":3.522,"d":"3.5"}]
["    female pregnancy",0.003,4,33,{"v":7.472,"d":"7.5"}]
["  developmental process","<0.001",62,1512,{"v":2.528,"d":"2.5"}]
["    multicellular organismal development","<0.001",52,1098,{"v":2.919,"d":"2.9"}]
["      embryonic development","<0.001",11,133,{"v":5.098,"d":"5.1"}]
["        embryonic development ending in birth or egg hatching",0.03,4,69,{"v":3.573,"d":"3.6"}]
["          chordate embryonic development",0.03,4,69,{"v":3.573,"d":"3.6"}]
["            embryonic skeletal development","<0.001",3,9,{"v":20.547,"d":"20.5"}]
["              embryonic skeletal morphogenesis","<0.001",3,7,{"v":26.417,"d":"26.4"}]
["      system development","<0.001",35,776,{"v":2.78,"d":"2.8"}]
["            metanephros development",0.04,2,18,{"v":6.849,"d":"6.8"}]
["              ureteric bud development",0.033,2,16,{"v":7.705,"d":"7.7"}]
["            thymus development",0.007,2,6,{"v":20.547,"d":"20.5"}]
["        nervous system development","<0.001",16,378,{"v":2.609,"d":"2.6"}]
["          neurogenesis",0.01,7,140,{"v":3.082,"d":"3.1"}]
["            generation of neurons",0.008,7,135,{"v":3.196,"d":"3.2"}]
["              neuroblast proliferation",0.026,2,14,{"v":8.806,"d":"8.8"}]
["        organ development","<0.001",25,454,{"v":3.394,"d":"3.4"}]
["                vasculogenesis",0.03,2,15,{"v":8.219,"d":"8.2"}]
["          organ morphogenesis",0.018,5,89,{"v":3.463,"d":"3.5"}]
["          respiratory tube development",0.003,4,33,{"v":7.472,"d":"7.5"}]
["            lung development",0.002,4,31,{"v":7.954,"d":"8.0"}]
["          muscle development","<0.001",10,97,{"v":6.355,"d":"6.4"}]
["            striated muscle development",0.009,4,47,{"v":5.246,"d":"5.2"}]
["              skeletal muscle development",0.028,3,38,{"v":4.866,"d":"4.9"}]
["                skeletal muscle fiber development",0.03,2,15,{"v":8.219,"d":"8.2"}]
["                  myoblast migration",0.001,2,2,{"v":61.64,"d":"61.6"}]
["            ear development",0.013,3,28,{"v":6.604,"d":"6.6"}]
["              inner ear development",0.011,3,26,{"v":7.112,"d":"7.1"}]
["                inner ear morphogenesis",0.005,3,19,{"v":9.733,"d":"9.7"}]
["    cellular developmental process","<0.001",22,599,{"v":2.264,"d":"2.3"}]
["      cell differentiation","<0.001",22,598,{"v":2.268,"d":"2.3"}]
["          neural crest cell differentiation",0.026,2,14,{"v":8.806,"d":"8.8"}]
["            neural crest cell development",0.026,2,14,{"v":8.806,"d":"8.8"}]
["              neural crest cell migration",0.015,2,10,{"v":12.328,"d":"12.3"}]
["                neuron apoptosis",0.044,2,19,{"v":6.488,"d":"6.5"}]
["                  regulation of neuron apoptosis",0.033,2,16,{"v":7.705,"d":"7.7"}]
["                    neuroprotection",0.002,2,3,{"v":41.094,"d":"41.1"}]
["    anatomical structure development",0.03,5,103,{"v":2.992,"d":"3.0"}]
["      anatomical structure morphogenesis",0.025,5,98,{"v":3.145,"d":"3.1"}]
["    regulation of developmental process",0.015,10,268,2.3]
["        negative regulation of programmed cell death",0.044,5,115,{"v":2.68,"d":"2.7"}]
["          negative regulation of apoptosis",0.043,5,114,{"v":2.704,"d":"2.7"}]
["            anti-apoptosis",0.012,5,80,{"v":3.853,"d":"3.9"}]
["  multicellular organismal process","<0.001",31,652,{"v":2.931,"d":"2.9"}]
["    system process","<0.001",25,445,{"v":3.463,"d":"3.5"}]
["      muscle system process",0.012,5,80,{"v":3.853,"d":"3.9"}]
["        muscle contraction",0.011,5,79,{"v":3.901,"d":"3.9"}]
["      neurological system process","<0.001",20,343,{"v":3.594,"d":"3.6"}]
["        sensory perception",0.017,9,235,{"v":2.361,"d":"2.4"}]
["        transmission of nerve impulse","<0.001",10,107,{"v":5.761,"d":"5.8"}]
["          synaptic transmission","<0.001",10,103,{"v":5.985,"d":"6.0"}]
["            synaptic transmission, cholinergic",0.004,2,4,{"v":30.82,"d":"30.8"}]
["    multicellular organism reproduction","<0.001",3,9,{"v":20.547,"d":"20.5"}]
["      reproductive process in a multicellular organism","<0.001",3,9,{"v":20.547,"d":"20.5"}]
["        lactation","<0.001",3,9,{"v":20.547,"d":"20.5"}]
["    respiratory gaseous exchange",0.026,2,14,{"v":8.806,"d":"8.8"}]
["  cellular process","<0.001",117,3482,{"v":2.071,"d":"2.1"}]
["    cellular metabolic process","<0.001",42,1500,{"v":1.726,"d":"1.7"}]
["      cellular macromolecule metabolic process","<0.001",32,1007,{"v":1.959,"d":"2.0"}]
["        cellular protein metabolic process","<0.001",32,1002,{"v":1.969,"d":"2.0"}]
["          proteolysis",0.006,9,195,{"v":2.845,"d":"2.8"}]
["          protein modification process",0.003,20,602,{"v":2.048,"d":"2.0"}]
["            post-translational protein modification",0.001,18,475,{"v":2.336,"d":"2.3"}]
["              protein amino acid phosphorylation","<0.001",15,290,{"v":3.188,"d":"3.2"}]
["          cellular protein catabolic process",0.031,4,70,{"v":3.522,"d":"3.5"}]
["            proteolysis involved in cellular protein catabolic process",0.03,4,69,{"v":3.573,"d":"3.6"}]
["              modification-dependent protein catabolic process",0.035,3,42,{"v":4.403,"d":"4.4"}]
["                ubiquitin-dependent protein catabolic process",0.035,3,42,{"v":4.403,"d":"4.4"}]
["    cell division","<0.001",10,137,{"v":4.499,"d":"4.5"}]
["      cytokinesis",0.036,2,17,{"v":7.252,"d":"7.3"}]
["        extracellular matrix organization and biogenesis",0.04,2,18,{"v":6.849,"d":"6.8"}]
["    cell communication","<0.001",61,1642,{"v":2.29,"d":"2.3"}]
["      cell-cell signaling",0.001,9,155,{"v":3.579,"d":"3.6"}]
["      signal transduction","<0.001",56,1564,{"v":2.207,"d":"2.2"}]
["        intracellular signaling cascade","<0.001",27,678,{"v":2.455,"d":"2.5"}]
["          intracellular receptor-mediated signaling pathway",0.005,4,39,{"v":6.322,"d":"6.3"}]
["            steroid hormone receptor signaling pathway",0.004,4,36,{"v":6.849,"d":"6.8"}]
["              estrogen receptor signaling pathway","<0.001",3,8,{"v":23.115,"d":"23.1"}]
["              G-protein signaling, coupled to cyclic nucleotide second messenger",0.04,2,18,{"v":6.849,"d":"6.8"}]
["          small GTPase mediated signal transduction",0.012,9,219,{"v":2.533,"d":"2.5"}]
["              positive regulation of small GTPase mediated signal transduction",0.005,2,5,{"v":24.656,"d":"24.7"}]
["                positive regulation of Ras protein signal transduction",0.004,2,4,{"v":30.82,"d":"30.8"}]
["            Ras protein signal transduction",0.007,6,98,{"v":3.774,"d":"3.8"}]
["              Rho protein signal transduction",0.041,3,45,{"v":4.109,"d":"4.1"}]
["        cell surface receptor linked signal transduction","<0.001",28,704,{"v":2.452,"d":"2.5"}]
["          G-protein coupled receptor protein signaling pathway",0.002,13,300,{"v":2.671,"d":"2.7"}]
["          enzyme linked receptor protein signaling pathway",0.007,9,202,{"v":2.746,"d":"2.7"}]
["            transmembrane receptor protein tyrosine kinase signaling pathway",0.036,6,146,{"v":2.533,"d":"2.5"}]
["    cell cycle","<0.001",17,427,{"v":2.454,"d":"2.5"}]
["        cell cycle checkpoint",0.036,2,17,{"v":7.252,"d":"7.3"}]
["      meiotic cell cycle",0.01,4,48,{"v":5.137,"d":"5.1"}]
["        M phase of meiotic cell cycle",0.009,4,47,{"v":5.246,"d":"5.2"}]
["          meiosis",0.009,4,47,{"v":5.246,"d":"5.2"}]
["            meiosis I",0.006,3,21,{"v":8.806,"d":"8.8"}]
["      mitotic cell cycle",0.021,7,165,{"v":2.615,"d":"2.6"}]
["        interphase of mitotic cell cycle",0.035,3,42,{"v":4.403,"d":"4.4"}]
["          G2/M transition of mitotic cell cycle",0.009,2,7,{"v":17.612,"d":"17.6"}]
["        M phase of mitotic cell cycle",0.013,6,115,{"v":3.216,"d":"3.2"}]
["          mitosis",0.013,6,114,{"v":3.244,"d":"3.2"}]
["            mitotic sister chromatid segregation",0.044,2,19,{"v":6.488,"d":"6.5"}]
["      cell cycle process",0.021,4,62,{"v":3.977,"d":"4.0"}]
["        cell cycle arrest",0.013,4,53,{"v":4.652,"d":"4.7"}]
["    regulation of cellular process",0.001,15,359,{"v":2.576,"d":"2.6"}]
["        negative regulation of signal transduction",0.018,3,32,{"v":5.779,"d":"5.8"}]
["      positive regulation of cellular process",0.006,8,160,{"v":3.082,"d":"3.1"}]
["        positive regulation of cellular metabolic process",0.018,4,59,{"v":4.179,"d":"4.2"}]
["          positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process",0.008,4,46,{"v":5.36,"d":"5.4"}]
["            positive regulation of transcription",0.008,4,46,{"v":5.36,"d":"5.4"}]
["  localization",0.02,30,1222,{"v":1.513,"d":"1.5"}]
["    cellular localization",0.02,12,368,{"v":2.01,"d":"2.0"}]
["      establishment of cellular localization",0.034,11,354,{"v":1.915,"d":"1.9"}]
["        secretion by cell",0.007,6,99,{"v":3.736,"d":"3.7"}]
["          secretory pathway",0.006,6,96,{"v":3.853,"d":"3.9"}]
["            exocytosis",0.035,3,42,{"v":4.403,"d":"4.4"}]
["            regulated secretory pathway","<0.001",5,21,{"v":14.676,"d":"14.7"}]
["              neurotransmitter secretion","<0.001",5,21,{"v":14.676,"d":"14.7"}]
["  response to stimulus","<0.001",40,1073,{"v":2.298,"d":"2.3"}]
["      taxis",0.038,4,75,{"v":3.287,"d":"3.3"}]
["        chemotaxis",0.038,4,75,{"v":3.287,"d":"3.3"}]
["    response to chemical stimulus",0.003,10,210,{"v":2.935,"d":"2.9"}]
["      response to hormone stimulus",0.009,4,47,{"v":5.246,"d":"5.2"}]
["        hormone-mediated signaling",0.015,2,10,{"v":12.328,"d":"12.3"}]
["      response to toxin",0.015,2,10,{"v":12.328,"d":"12.3"}]
["      response to xenobiotic stimulus",0.015,2,10,{"v":12.328,"d":"12.3"}]
["        xenobiotic metabolic process",0.013,2,9,{"v":13.698,"d":"13.7"}]
["    behavior",0.006,5,68,{"v":4.532,"d":"4.5"}]
["      feeding behavior",0.03,2,15,{"v":8.219,"d":"8.2"}]
["  reproduction",0.013,7,150,{"v":2.877,"d":"2.9"}]
["    sexual reproduction",0.012,7,147,{"v":2.935,"d":"2.9"}]
["      gamete generation",0.015,6,119,{"v":3.108,"d":"3.1"}]
["        male gamete generation",0.021,5,93,{"v":3.314,"d":"3.3"}]
["          spermatogenesis",0.021,5,93,{"v":3.314,"d":"3.3"}]
["  biological adhesion",0.003,12,283,{"v":2.614,"d":"2.6"}]
["    cell adhesion",0.003,12,283,{"v":2.614,"d":"2.6"}]
["  metabolic process","<0.001",61,2075,{"v":1.812,"d":"1.8"}]
["              ribonucleotide metabolic process",0.033,2,16,{"v":7.705,"d":"7.7"}]
["    macromolecule metabolic process","<0.001",45,1516,{"v":1.83,"d":"1.8"}]
["      biopolymer metabolic process","<0.001",42,1437,{"v":1.802,"d":"1.8"}]
["        RNA metabolic process","<0.001",40,1312,{"v":1.879,"d":"1.9"}]
["          RNA biosynthetic process","<0.001",32,1048,{"v":1.882,"d":"1.9"}]
["            transcription, DNA-dependent","<0.001",32,1048,{"v":1.882,"d":"1.9"}]
["              regulation of transcription, DNA-dependent","<0.001",31,919,{"v":2.079,"d":"2.1"}]
["          regulation of RNA metabolic process",0.002,12,260,{"v":2.845,"d":"2.8"}]
["            positive regulation of RNA metabolic process","<0.001",11,158,{"v":4.291,"d":"4.3"}]
["              positive regulation of transcription, DNA-dependent","<0.001",11,156,{"v":4.346,"d":"4.3"}]
["                positive regulation of transcription from RNA polymerase II promoter",0.003,7,108,{"v":3.995,"d":"4.0"}]

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