* wt intra-strain * 1 acrA 2 adiA 3 apaH 4 appC 5 argR 6 aroA 7 aroH 8 aroL 9 asnC 10 astD 11 astE 12 atoA 13 betI 14 bglF 15 caiE 16 carB 17 ccmB 18 cdd 19 cheR 20 cheW 21 cheY 22 chiA 23 codA 24 codB 25 crr 26 csgF 27 cstA 28 cusC 29 cynR 30 cysA 31 cysG 32 cysM 33 cysP 34 cytR 35 ddpX 36 deoA 37 deoC 38 deoD 39 dsbC 40 dusB 41 ecpD 42 edd 43 entC 44 entS 45 evgA 46 exbB 47 exuR 48 fabB 49 fadA 50 fbaA 51 fdnG 52 fdnI 53 fecA 54 fecB 55 fecE 56 fhuA 57 fhuE 58 fis 59 fixB 60 fldA 61 flgA 62 flgB 63 flgC 64 flgD 65 flgE 66 flgF 67 flgG 68 flgH 69 flgI 70 flgJ 71 flgM 72 flhCflhD 73 fliJ 74 fliY 75 fruA 76 fruB 77 fruK 78 ftsZ 79 fumB 80 gabT 81 galM 82 gapA 83 gatA 84 gcvA 85 gcvH 86 gcvT 87 glgS 88 glmS 89 glmU 90 glnH 91 glnL 92 glnP 93 glnQ 94 glpD 95 glpG 96 gltJ 97 glyA 98 gnd 99 gntR 100 gntY 101 grpE 102 guaB 103 gutQ 104 gyrA 105 gyrB 106 hdeA 107 hdeB 108 hupAhupB 109 hyaA 110 hycC 111 hypF 112 ilvB 113 ilvD 114 ilvE 115 ilvM 116 inaA 117 iscA 118 iscR 119 iscS 120 kdpA 121 kdpB 122 lamB 123 leuA 124 leuD 125 leuO 126 lon 127 lrhA 128 metB 129 metL 130 mhpD 131 mhpE 132 mngB 133 moaA 134 modE 135 mreB 136 mreC 137 mreD 138 mukE 139 mukF 140 nanR 141 narG 142 narP 143 ndh 144 nhaA 145 nhaR 146 nirD 147 nuoA 148 nuoB 149 nuoC 150 nuoE 151 nuoF 152 ompX 153 osmB 154 oxyR 155 paaJ 156 pagP 157 phoE 158 phoH 159 phoP 160 phoQ 161 pncB 162 pnp 163 polB 164 ppiD 165 proP 166 proV 167 proW 168 psd 169 pspB 170 purA 171 purB 172 purC 173 purE 174 purF 175 purK 176 purM 177 purN 178 purR 179 pyrC 180 pyrD 181 rbfA 182 rbsB 183 rcsArcsB 184 recA 185 recF 186 recN 187 recX 188 rng 189 rpoH 190 rpsJ 191 rpsU 192 sdhA 193 sdhB 194 sgbH 195 slyA 196 slyB 197 smpA 198 smtA 199 spy 200 sucA 201 sulA 202 tdcD 203 tdcE 204 tdh 205 treB 206 treC 207 trmD 208 trpB 209 trpD 210 trpE 211 trpL 212 trpR 213 tsr 214 tsx 215 ubiC 216 ubiG 217 uidA 218 ulaE 219 ulaF 220 ung 221 upp 222 uvrB 223 wcaA 224 wcaB 225 wza 226 xapR 227 xylR 228 ybjC 229 ycgR 230 ydeA 231 yrbL 232 znuA 233 znuC 5 -> 10, 5 -> 11, 5 -> 16, 5 -> 162, 5 -> 181, 34 -> 18, 34 -> 36, 34 -> 37, 34 -> 38, 34 -> 189, 34 -> 214, 58 -> 3, 58 -> 14, 58 -> 31, 58 -> 36, 58 -> 37, 58 -> 38, 58 -> 40, 58 -> 79, 58 -> 91, 58 -> 93, 58 -> 102, 58 -> 104, 58 -> 105, 58 -> 108, 58 -> 143, 58 -> 146, 58 -> 147, 58 -> 148, 58 -> 149, 58 -> 150, 58 -> 151, 58 -> 162, 58 -> 165, 58 -> 181, 58 -> 227, 72 -> 17, 72 -> 61, 72 -> 62, 72 -> 63, 72 -> 64, 72 -> 65, 72 -> 66, 72 -> 67, 72 -> 68, 72 -> 69, 72 -> 70, 72 -> 71, 72 -> 73, 72 -> 74, 72 -> 96, 72 -> 111, 72 -> 135, 72 -> 136, 72 -> 137, 72 -> 188, 72 -> 229, 84 -> 85, 84 -> 86, 99 -> 42, 99 -> 100, 108 -> 81, 118 -> 100, 118 -> 109, 118 -> 117, 118 -> 119, 125 -> 123, 125 -> 124, 127 -> 72, 134 -> 17, 134 -> 36, 134 -> 37, 134 -> 38, 134 -> 110, 134 -> 133, 142 -> 17, 142 -> 31, 142 -> 51, 142 -> 52, 142 -> 109, 142 -> 146, 145 -> 144, 159 -> 1, 159 -> 128, 159 -> 129, 159 -> 156, 159 -> 160, 159 -> 196, 159 -> 231, 178 -> 16, 178 -> 23, 178 -> 24, 178 -> 85, 178 -> 86, 178 -> 97, 178 -> 102, 178 -> 171, 178 -> 172, 178 -> 173, 178 -> 174, 178 -> 175, 178 -> 176, 178 -> 177, 178 -> 179, 178 -> 180, 183 -> 26, 183 -> 72, 183 -> 78, 183 -> 153, 183 -> 223, 183 -> 224, 183 -> 225, 212 -> 7, 212 -> 8, 212 -> 208, 212 -> 209, 212 -> 210, 212 -> 211 * fis mutant intra-strain * 1 adrA 2 agaB 3 agaD 4 allC 5 alpA 6 apaH 7 appC 8 aroA 9 ascG 10 astE 11 bdm 12 betI 13 bglF 14 caiC 15 caiT 16 carA 17 carB 18 cdaR 19 cheW 20 cheY 21 cpxR 22 csgC 23 csgD 24 csiE 25 cspA 26 cusR 27 cusS 28 cvpA 29 cysM 30 cytR 31 dcuS 32 deoR 33 dhaK 34 dhaR 35 dmsA 36 dnaG 37 dsbC 38 dusB 39 eda 40 epd 41 evgA 42 exuR 43 fadJ 44 fdnI 45 fhuB 46 fhuF 47 fimE 48 fixB 49 flgF 50 flgG 51 flgI 52 flgJ 53 flgN 54 flhB 55 flhCflhD 56 fliC 57 fliD 58 fliG 59 fliI 60 fliK 61 fliR 62 fliS 63 fnr 64 focA 65 focB 66 frdD 67 fruR 68 ftsQ 69 gadE 70 gadW 71 gadX 72 galE 73 galM 74 galR 75 gatY 76 gcvH 77 gcvT 78 glcD 79 glgA 80 glmS 81 glpD 82 glpE 83 glpF 84 glpG 85 gltF 86 gltL 87 glyA 88 gntY 89 grpE 90 guaA 91 gyrB 92 hcaB 93 hcaD 94 hcaE 95 hcr 96 hdeD 97 hdfR 98 hflD 99 hipBhipA 100 hmp 101 hyaA 102 hybF 103 hycE 104 ibpB 105 iclR 106 idnR 107 idnT 108 ihfAihfB 109 ilvA 110 inaA 111 iscU 112 leuB 113 leuC 114 leuD 115 livH 116 livM 117 lon 118 lrp 119 lsrG 120 lysA 121 malT 122 malY 123 mhpF 124 mntH 125 moaA 126 modE 127 moeB 128 mtlD 129 mukE 130 mukF 131 nadR 132 nanR 133 nfnB 134 nhaA 135 nhaR 136 nikA 137 nikR 138 nirB 139 nuoL 140 osmC 141 osmE 142 phnE 143 phnG 144 phnK 145 phoH 146 pitA 147 pncB 148 polB 149 proV 150 pspF 151 pstB 152 purB 153 purC 154 purE 155 purF 156 purH 157 purK 158 purM 159 purN 160 purR 161 pykF 162 qseB 163 rbsK 164 rcsArcsB 165 rdoA 166 recA 167 recN 168 rhaA 169 rimK 170 rplS 171 rplT 172 rpoD 173 rpoE 174 rpsQ 175 rseA 176 rseB 177 rseC 178 seqA 179 slyA 180 smpA 181 smtA 182 sohB 183 speA 184 spy 185 ssuD 186 sucB 187 sucD 188 sufE 189 sufS 190 sulA 191 tdcF 192 trpE 193 trpR 194 trxA 195 ubiC 196 ugpC 197 ulaB 198 umuC 199 uvrA 200 uvrB 201 ybjN 202 ydiU 203 ygfH 204 ygjG 205 yiaJ 206 yodA 207 yrbL 208 znuA 209 zur 21 -> 19, 21 -> 22, 21 -> 23, 21 -> 37, 21 -> 165, 21 -> 173, 21 -> 175, 21 -> 176, 21 -> 177, 21 -> 180, 23 -> 1, 23 -> 22, 26 -> 27, 34 -> 33, 41 -> 69, 55 -> 49, 55 -> 50, 55 -> 51, 55 -> 52, 55 -> 53, 55 -> 54, 55 -> 57, 55 -> 58, 55 -> 59, 55 -> 60, 55 -> 61, 55 -> 62, 55 -> 86, 63 -> 14, 63 -> 15, 63 -> 20, 63 -> 31, 63 -> 35, 63 -> 44, 63 -> 48, 63 -> 64, 63 -> 65, 63 -> 66, 63 -> 70, 63 -> 71, 63 -> 76, 63 -> 77, 63 -> 85, 63 -> 95, 63 -> 100, 63 -> 125, 63 -> 127, 63 -> 136, 63 -> 137, 63 -> 138, 63 -> 139, 63 -> 146, 63 -> 151, 63 -> 158, 63 -> 159, 63 -> 170, 63 -> 171, 63 -> 174, 63 -> 185, 63 -> 186, 63 -> 187, 63 -> 191, 63 -> 195, 63 -> 203, 67 -> 39, 67 -> 40, 67 -> 128, 67 -> 138, 67 -> 161, 69 -> 56, 69 -> 71, 69 -> 85, 69 -> 96, 69 -> 118, 69 -> 164, 70 -> 71, 71 -> 96, 71 -> 117, 74 -> 72, 74 -> 73, 97 -> 55, 106 -> 107, 108 -> 14, 108 -> 15, 108 -> 16, 108 -> 17, 108 -> 35, 108 -> 38, 108 -> 55, 108 -> 64, 108 -> 78, 108 -> 99, 108 -> 103, 108 -> 104, 108 -> 109, 108 -> 138, 108 -> 139, 108 -> 141, 108 -> 151, 108 -> 186, 108 -> 187, 108 -> 188, 108 -> 189, 108 -> 191, 108 -> 195, 108 -> 197, 108 -> 204, 108 -> 205, 118 -> 8, 118 -> 47, 118 -> 76, 118 -> 77, 118 -> 85, 118 -> 109, 118 -> 115, 118 -> 116, 118 -> 121, 118 -> 140, 126 -> 35, 126 -> 103, 126 -> 125, 131 -> 147, 135 -> 134, 135 -> 140, 137 -> 136, 160 -> 16, 160 -> 17, 160 -> 28, 160 -> 76, 160 -> 77, 160 -> 87, 160 -> 90, 160 -> 98, 160 -> 152, 160 -> 153, 160 -> 154, 160 -> 155, 160 -> 156, 160 -> 157, 160 -> 158, 160 -> 159, 160 -> 183, 162 -> 55, 164 -> 11, 164 -> 23, 164 -> 55, 164 -> 140, 193 -> 192, 209 -> 208 * hns mutant intra-strain * 1 acrE 2 acrF 3 agaA 4 agp 5 allD 6 argE 7 argP 8 argR 9 aroG 10 aroL 11 aroM 12 asr 13 atoC 14 bcsB 15 bcsZ 16 bolA 17 borD 18 cadA 19 caiD 20 carA 21 ccmA 22 cheY 23 codA 24 codB 25 cpxP 26 csgD 27 csgE 28 csgG 29 cspA 30 cvpA 31 cynR 32 cyoA 33 cyoD 34 cyoE 35 cysJ 36 cysM 37 cytR 38 ddpA 39 ddpC 40 dnaG 41 dppC 42 dppF 43 dsbC 44 eda 45 entD 46 entE 47 epd 48 fabA 49 fabB 50 fdnI 51 fecA 52 fecI 53 fhuC 54 fldA 55 flgJ 56 flhCflhD 57 fliK 58 fliY 59 fnr 60 fruR 61 fumB 62 fur 63 gadX 64 galT 65 gatC 66 gatD 67 gatY 68 gatZ 69 gcvH 70 glcA 71 glmU 72 glpB 73 glpD 74 gltI 75 gltJ 76 gltL 77 glyA 78 gntU 79 gntY 80 grxA 81 guaB 82 gudX 83 gyrB 84 hcaC 85 hcr 86 hdeA 87 hdfR 88 hemA 89 hflD 90 hycH 91 hypF 92 iclR 93 idnD 94 idnO 95 ilvM 96 iscR 97 iscU 98 kdpA 99 leuA 100 leuO 101 lon 102 malP 103 malT 104 marA 105 mazE 106 metC 107 mgrB 108 motB 109 mreB 110 mtlD 111 mukE 112 mukF 113 nanR 114 napC 115 narI 116 narP 117 narX 118 ndh 119 nfo 120 nhaA 121 nhaR 122 nirD 123 nmpC 124 nrdH 125 nrfB 126 nrfG 127 nuoA 128 nuoB 129 nuoE 130 nuoF 131 ompX 132 osmB 133 pdxA 134 pepA 135 pepT 136 pgm 137 phoP 138 polB 139 prpR 140 pspE 141 purA 142 purC 143 purE 144 purF 145 purM 146 purN 147 purR 148 pykF 149 pyrC 150 qseB 151 rbsA 152 rdoA 153 recF 154 recN 155 rhaR 156 rpoD 157 rpoE 158 rpoH 159 rseA 160 rseB 161 sdhA 162 sdhB 163 sdhC 164 sdhD 165 sdiA 166 smpA 167 smtA 168 speC 169 spy 170 sra 171 srlR 172 sucA 173 sufS 174 sulA 175 tap 176 tdcB 177 tdcC 178 trpE 179 tsx 180 tyrR 181 ubiC 182 ugpB 183 ulaG 184 uvrB 185 uvrY 186 wcaB 187 wzc 188 xapR 189 xylA 190 xylG 191 xylR 192 ybbW 193 ybjC 194 ydeO 195 yhfA 196 yiaN 197 ynfG 198 yqjI 199 yrbL 200 zntR 201 znuA 202 znuB 7 -> 153, 8 -> 6, 8 -> 20, 26 -> 27, 26 -> 28, 37 -> 158, 37 -> 179, 56 -> 21, 56 -> 55, 56 -> 57, 56 -> 58, 56 -> 72, 56 -> 74, 56 -> 75, 56 -> 76, 56 -> 91, 56 -> 109, 56 -> 114, 56 -> 125, 56 -> 126, 59 -> 1, 59 -> 2, 59 -> 14, 59 -> 15, 59 -> 19, 59 -> 21, 59 -> 22, 59 -> 32, 59 -> 33, 59 -> 34, 59 -> 41, 59 -> 42, 59 -> 50, 59 -> 61, 59 -> 63, 59 -> 69, 59 -> 72, 59 -> 85, 59 -> 88, 59 -> 102, 59 -> 114, 59 -> 115, 59 -> 117, 59 -> 118, 59 -> 122, 59 -> 125, 59 -> 126, 59 -> 127, 59 -> 128, 59 -> 129, 59 -> 130, 59 -> 131, 59 -> 135, 59 -> 145, 59 -> 146, 59 -> 161, 59 -> 162, 59 -> 163, 59 -> 164, 59 -> 172, 59 -> 175, 59 -> 176, 59 -> 177, 59 -> 181, 59 -> 197, 59 -> 198, 60 -> 44, 60 -> 47, 60 -> 110, 60 -> 122, 60 -> 148, 62 -> 32, 62 -> 33, 62 -> 34, 62 -> 45, 62 -> 46, 62 -> 51, 62 -> 52, 62 -> 53, 62 -> 56, 62 -> 61, 62 -> 124, 62 -> 147, 62 -> 161, 62 -> 162, 62 -> 163, 62 -> 164, 62 -> 172, 62 -> 173, 63 -> 18, 63 -> 86, 63 -> 101, 87 -> 56, 96 -> 79, 96 -> 97, 96 -> 114, 96 -> 173, 100 -> 99, 103 -> 102, 104 -> 86, 104 -> 119, 104 -> 141, 116 -> 21, 116 -> 50, 116 -> 85, 116 -> 114, 116 -> 122, 116 -> 125, 116 -> 126, 121 -> 120, 134 -> 20, 137 -> 17, 137 -> 107, 137 -> 199, 147 -> 20, 147 -> 23, 147 -> 24, 147 -> 30, 147 -> 69, 147 -> 77, 147 -> 81, 147 -> 89, 147 -> 142, 147 -> 143, 147 -> 144, 147 -> 145, 147 -> 146, 147 -> 149, 150 -> 56, 180 -> 9, 180 -> 10, 180 -> 11, 191 -> 189, 191 -> 190 * wt-fis inter-strain low supercoiling * 1 aceB 2 acrE 3 adhE 4 adiA 5 aer 6 ahpC 7 ahpF 8 aldA 9 aldB 10 allR 11 aroA 12 bioA 13 bioC 14 bioF 15 cdd 16 codA 17 crr 18 cyoB 19 cyoD 20 cytR 21 dadA 22 dhaL 23 dnaG 24 dps 25 dsbA 26 dusB 27 eda 28 emrY 29 entA 30 entB 31 evgA 32 exbB 33 exbD 34 fabB 35 fadJ 36 fecA 37 fecB 38 fecD 39 fecI 40 fepA 41 fhuF 42 fimA 43 fimI 44 fis 45 fixC 46 flgA 47 flgE 48 flgH 49 fliC 50 fliG 51 fliJ 52 fliL 53 fliM 54 fliN 55 fliP 56 fliQ 57 fliR 58 fruR 59 ftsK 60 ftsQ 61 ftsZ 62 galM 63 gatC 64 gatY 65 gcvA 66 glcB 67 glk 68 glmU 69 glnB 70 glnH 71 glnP 72 glnQ 73 glpD 74 glpE 75 glpG 76 glpQ 77 gltB 78 gltD 79 gltF 80 glyA 81 gnd 82 guaB 83 hdeA 84 hemL 85 hflD 86 hipBhipA 87 hisJ 88 hycI 89 ilvY 90 infB 91 iscA 92 iscR 93 iscS 94 kbl 95 kdgR 96 leuA 97 lpxD 98 lysU 99 manY 100 marA 101 marR 102 mdh 103 metB 104 metK 105 metN 106 mglB 107 mntR 108 moaE 109 moeB 110 motB 111 mreB 112 nagB 113 narL 114 narX 115 nfnB 116 nrdA 117 nrdB 118 nupC 119 ompA 120 ompR 121 oppA 122 osmC 123 oxyR 124 paaX 125 pdxA 126 pepD 127 pepT 128 pfkA 129 potI 130 pqiB 131 pspE 132 pstC 133 ptsI 134 purB 135 purM 136 putA 137 pyrD 138 qseB 139 rdoA 140 recN 141 ribA 142 rplC 143 rplD 144 rplS 145 rpoS 146 rpsI 147 rpsJ 148 rpsP 149 rseA 150 rseC 151 ruvA 152 seqA 153 slyB 154 sodB 155 speB 156 speC 157 sra 158 tar 159 tauD 160 tdcD 161 tdh 162 tehB 163 tnaA 164 tpx 165 treB 166 trpA 167 trpB 168 ubiC 169 ubiG 170 ulaE 171 upp 172 uvrA 173 uvrD 174 xylF 175 xylH 176 ybdB 177 ycgR 178 ygaF 179 yhdE 180 yhfA 181 znuA 182 znuC 183 zraR 20 -> 15, 20 -> 118, 31 -> 28, 44 -> 3, 44 -> 9, 44 -> 26, 44 -> 72, 44 -> 82, 44 -> 90, 44 -> 100, 44 -> 101, 44 -> 116, 44 -> 117, 44 -> 125, 44 -> 157, 44 -> 174, 44 -> 175, 58 -> 1, 58 -> 3, 58 -> 17, 58 -> 27, 58 -> 67, 58 -> 128, 58 -> 133, 92 -> 91, 92 -> 93, 95 -> 27, 100 -> 83, 100 -> 101, 100 -> 115, 100 -> 130, 100 -> 136, 101 -> 100, 113 -> 3, 113 -> 109, 113 -> 168, 120 -> 157, 123 -> 6, 123 -> 7, 123 -> 24 * wt-fis inter-strain high supercoiling * 1 aceF 2 acs 3 ahpC 4 aldB 5 allR 6 argR 7 aroA 8 baeS 9 bglG 10 cbl 11 chbG 12 cheB 13 cheZ 14 cpxP 15 cydC 16 deoB 17 dnaG 18 dppB 19 entS 20 exbB 21 exbD 22 fecA 23 fecB 24 feoA 25 fepA 26 fhuF 27 fimA 28 fimI 29 flgJ 30 flgM 31 flgN 32 flhB 33 fliE 34 fliF 35 fliG 36 fliL 37 fliM 38 fliP 39 fliQ 40 fliZ 41 galR 42 galT 43 garR 44 gcl 45 glmS 46 gltB 47 gltD 48 glyA 49 gutQ 50 hdeD 51 hdfR 52 hemL 53 hflD 54 hipBhipA 55 hisJ 56 hybD 57 hydN 58 inaA 59 iscA 60 iscS 61 iscU 62 leuA 63 lysU 64 malX 65 malY 66 marA 67 marR 68 mglC 69 moeB 70 motA 71 mukE 72 mukF 73 nadR 74 nagA 75 nagB 76 narL 77 narX 78 nfnB 79 nfsA 80 ompA 81 ompC 82 ompX 83 oxyR 84 paaB 85 paaI 86 pfkA 87 pgk 88 phnI 89 ppiD 90 purB 91 purD 92 purE 93 purR 94 rob 95 rplD 96 rplP 97 rpsI 98 ruvA 99 smtA 100 sodA 101 sodB 102 soxS 103 speC 104 stpA 105 tauC 106 tdcA 107 tnaB 108 tonB 109 tpx 110 trpA 111 ulaG 112 xylF 113 ybdB 114 ybjC 115 ydfD 116 yecR 117 ygaF 118 ynfF 119 znuA 5 -> 44, 10 -> 105, 41 -> 42, 41 -> 68, 66 -> 58, 66 -> 67, 66 -> 78, 66 -> 94, 66 -> 100, 67 -> 66, 76 -> 15, 76 -> 56, 76 -> 69, 83 -> 3, 93 -> 48, 93 -> 53, 93 -> 90, 93 -> 91, 93 -> 92, 94 -> 58, 94 -> 66, 94 -> 67, 94 -> 100, 102 -> 58, 102 -> 66, 102 -> 67, 102 -> 79, 102 -> 100, 102 -> 114 * wt-hns inter-strain low supercoiling * 1 acrA 2 acrE 3 acrF 4 agaA 5 agaC 6 aldB 7 allA 8 allB 9 allC 10 allD 11 alsB 12 araG 13 araH 14 aroH 15 astB 16 atoA 17 bcsZ 18 bdm 19 bioB 20 bolA 21 borD 22 cadA 23 cadB 24 chbF 25 chbG 26 chbR 27 cheY 28 codA 29 csgB 30 csgD 31 csgE 32 csgG 33 cspA 34 cyoC 35 cysW 36 dadX 37 dcuC 38 deoD 39 dmsC 40 dnaA 41 dnaG 42 dnaN 43 dppF 44 dps 45 dsdX 46 emrK 47 emrY 48 fecA 49 fecB 50 fhlA 51 fhuC 52 fimA 53 fimB 54 fimD 55 fimE 56 fimG 57 fimI 58 fixB 59 fixC 60 flgA 61 flgB 62 flgC 63 flgD 64 flgE 65 flgF 66 flgG 67 flgH 68 flgI 69 flgJ 70 flgM 71 flgN 72 flhA 73 flhB 74 flhE 75 fliA 76 fliC 77 fliD 78 fliE 79 fliF 80 fliG 81 fliH 82 fliJ 83 fliK 84 fliL 85 fliM 86 fliN 87 fliO 88 fliQ 89 fliR 90 fliS 91 fliY 92 fliZ 93 ftsK 94 fucI 95 fucU 96 fumC 97 gadA 98 gadC 99 gadE 100 gadW 101 galP 102 galS 103 garL 104 gatA 105 gatC 106 gatD 107 gatR_2gatR_1 108 glgS 109 glpG 110 gltF 111 glxR 112 gnd 113 hcaC 114 hcr 115 hdeA 116 hdeB 117 hemA 118 hipBhipA 119 hlyE 120 hns 121 hybB 122 idnK 123 idnO 124 inaA 125 kbl 126 leuO 127 lon 128 malP 129 malZ 130 mdtD 131 metE 132 mhpD 133 moaE 134 motB 135 mtr 136 nagA 137 nanA 138 nanC 139 nmpC 140 nrdH 141 nrfB 142 ompF 143 oppC 144 osmB 145 osmC 146 paaB 147 paaI 148 pagP 149 pdxA 150 pflB 151 pheM 152 polB 153 purC 154 rbfA 155 rbsD 156 rcsArcsB 157 rplM 158 rpsO 159 rseA 160 rseB 161 rstA 162 ruvA 163 sdhA 164 sdhB 165 sgbU 166 slp 167 slyA 168 stpA 169 tauA 170 tauB 171 tdcB 172 tdcC 173 tdcD 174 tdcF 175 tnaA 176 treB 177 treC 178 trmA 179 ubiG 180 ulaA 181 ulaR 182 uvrC 183 uxaA 184 wcaA 185 wcaB 186 wza 187 wzb 188 wzc 189 xapB 190 xapR 191 ybaT 192 ybbW 193 ybjC 194 ybjG 195 ybjN 196 yciE 197 yciF 198 ydeO 199 yecR 200 yhcH 201 yhjH 202 yiaJ 203 yiaN 204 ylbA 205 yodA 206 znuB 26 -> 24, 26 -> 25, 30 -> 29, 30 -> 31, 30 -> 32, 33 -> 120, 40 -> 42, 99 -> 22, 99 -> 23, 99 -> 34, 99 -> 76, 99 -> 97, 99 -> 98, 99 -> 110, 99 -> 112, 99 -> 115, 99 -> 116, 99 -> 156, 100 -> 97, 100 -> 98, 102 -> 101, 107 -> 104, 107 -> 105, 107 -> 106, 120 -> 20, 120 -> 22, 120 -> 23, 120 -> 52, 120 -> 53, 120 -> 54, 120 -> 55, 120 -> 56, 120 -> 57, 120 -> 75, 120 -> 76, 120 -> 91, 120 -> 92, 120 -> 97, 120 -> 98, 120 -> 115, 120 -> 116, 120 -> 119, 120 -> 145, 120 -> 156, 120 -> 168, 120 -> 196, 120 -> 197, 156 -> 18, 156 -> 30, 156 -> 31, 156 -> 32, 156 -> 144, 156 -> 145, 156 -> 184, 156 -> 185, 156 -> 186, 156 -> 187, 156 -> 188, 167 -> 119, 181 -> 180, 190 -> 189, 198 -> 99, 202 -> 165, 202 -> 203 * wt-hns inter-strain high supercoiling * 1 acrA 2 acrE 3 acrF 4 adiY 5 allC 6 alsI 7 bdm 8 betA 9 betB 10 betI 11 borD 12 cadA 13 caiA 14 cdd 15 chbB 16 chbR 17 csgD 18 csgE 19 cspA 20 cstA 21 cynT 22 cytR 23 dcuR 24 dcuS 25 emrY 26 entA 27 evgA 28 evgS 29 fabB 30 fabR 31 fecR 32 fepE 33 fhuA 34 fhuC 35 fimA 36 fimB 37 fimD 38 fimE 39 fimI 40 flgA 41 flgB 42 flgC 43 flgD 44 flgE 45 flgF 46 flgG 47 flgH 48 flgI 49 flgJ 50 flgM 51 flgN 52 flhB 53 fliA 54 fliC 55 fliD 56 fliE 57 fliF 58 fliG 59 fliH 60 fliJ 61 fliK 62 fliL 63 fliM 64 fliN 65 fliQ 66 fliS 67 fliZ 68 focA 69 gadA 70 gadC 71 gadE 72 galE 73 gatD 74 gatY 75 gatZ 76 glpF 77 glpG 78 gltD 79 gltF 80 gltK 81 gntX 82 hdeA 83 hdeB 84 hdeD 85 hipBhipA 86 hlyE 87 hns 88 hycI 89 hypC 90 idnK 91 ilvN 92 kbl 93 kdpB 94 metH 95 metI 96 metR 97 moaB 98 motB 99 nagA 100 nanC 101 nfnB 102 nikC 103 nmpC 104 nrfD 105 ompC 106 ompF 107 osmB 108 osmC 109 pagP 110 pflB 111 phoR 112 prpD 113 purL 114 rbsC 115 rbsD 116 rbsK 117 rcsArcsB 118 rng 119 rpsC 120 rpsJ 121 rpsS 122 serC 123 sgbU 124 slp 125 sra 126 ssuC 127 stpA 128 sufA 129 sufC 130 tar 131 tauA 132 tdcC 133 tdcD 134 tnaA 135 trpD 136 tsr 137 ubiC 138 ung 139 uvrB 140 uvrC 141 uvrY 142 wcaA 143 wzc 144 xapR 145 xseA 146 xylB 147 xylF 148 ybdB 149 yciF 150 ydeA 151 ydfE 152 yeaG 153 yecR 154 yhdX 155 yiaN 156 yodA 157 ysgA 10 -> 8, 10 -> 9, 16 -> 15, 17 -> 18, 19 -> 87, 22 -> 14, 27 -> 25, 27 -> 28, 27 -> 71, 30 -> 29, 71 -> 12, 71 -> 54, 71 -> 69, 71 -> 70, 71 -> 78, 71 -> 79, 71 -> 82, 71 -> 83, 71 -> 84, 71 -> 117, 87 -> 12, 87 -> 35, 87 -> 36, 87 -> 37, 87 -> 38, 87 -> 39, 87 -> 53, 87 -> 54, 87 -> 67, 87 -> 69, 87 -> 70, 87 -> 72, 87 -> 82, 87 -> 83, 87 -> 84, 87 -> 86, 87 -> 108, 87 -> 117, 87 -> 127, 87 -> 149, 96 -> 94, 117 -> 7, 117 -> 17, 117 -> 18, 117 -> 107, 117 -> 108, 117 -> 125, 117 -> 142, 117 -> 143