* wt-fis inter-strain, high supercoiling, positive log ratio * 1 yaaW 2 pdxA 3 leuA 4 fruR 5 mraZ 6 ftsL 7 ftsI 8 mraY 9 murG 10 ftsQ 11 secM 12 yacH 13 yadK 14 degP 15 map 16 dxr 17 cdsA 18 lpxD 19 lpxB 20 dnaE 21 yaeB 22 metN 23 gloB 24 yafL 25 ykfG 26 yagM 27 yaiP 28 tauD 29 yaiU 30 yaiY 31 cyoD 32 cyoB 33 yajG 34 sfmF 35 rusA 36 fepA 37 entB 38 entA 39 ybdB 40 cobC 41 ybfE 42 seqA 43 ybgC 44 tolA 45 bioA 46 bioF 47 bioC 48 rhlE 49 glnQ 50 glnP 51 glnH 52 rhtA 53 mntR 54 ybiR 55 ybjO 56 infA 57 ftsK 58 cspG 59 mdoC 60 yceK 61 bssS 62 flgH 63 plsX 64 dhaL 65 prfA 66 yciA 67 ribA 68 puuR 69 ycjO 70 ydcR 71 ydcX 72 yddH 73 narV 74 ydeR 75 hipA 76 marR 77 marA 78 ydfJ 79 essQ 80 mdtJ 81 rsxB 82 rsxC 83 tppB 84 pheS 85 rpmI 86 ydjY 87 topB 88 yebR 89 yebF 90 znuA 91 znuC 92 fliG 93 fliJ 94 fliL 95 fliM 96 fliN 97 fliP 98 fliQ 99 fliR 100 cld 101 rfbB 102 galF 103 metG 104 spr 105 nrdA 106 nrdB 107 yfaE 108 fabB 109 yfdG 110 yfdH 111 emrY 112 evgA 113 ucpA 114 iscX 115 fdx 116 hscA 117 iscA 118 iscS 119 iscR 120 rseC 121 rseA 122 yfiH 123 rplS 124 rpsP 125 recN 126 ygaZ 127 ygcM 128 rumA 129 gcvA 130 yqeG 131 ygeM 132 ygfS 133 argO 134 metK 135 rsmE 136 yggW 137 yghE 138 exbD 139 exbB 140 qseB 141 mdaB 142 yqiA 143 tolC 144 ygiA 145 yqiI 146 htrG 147 dnaG 148 sstT 149 yqjB 150 tdcD 151 yrbA 152 gltF 153 yhcA 154 sspB 155 sspA 156 rpsI 157 degQ 158 dusB 159 fis 160 acrE 161 rimN 162 yrdD 163 smg 164 def 165 fmt 166 rsmB 167 rplQ 168 rpsM 169 rpsN 170 rplN 171 rplD 172 rplC 173 rpsJ 174 tusB 175 tusC 176 tusD 177 yheO 178 dam 179 aroB 180 aroK 181 yrfB 182 nudE 183 yrfF 184 hslO 185 pck 186 glpG 187 glpE 188 glpD 189 yhhT 190 yhiQ 191 prlC 192 yhjK 193 bcsG 194 xylF 195 xylH 196 bax 197 yibI 198 lldD 199 cysE 200 yicR 201 rpmH 202 rnpA 203 pstC 204 glmU 205 atpG 206 ilvY 207 rhoL 208 wzyE 209 ubiB 210 rfaH 211 yigZ 212 trkH 213 hemG 214 kdgT 215 rplK 216 zraR 217 yjcZ 218 efp 219 rpsR 220 rplI 221 fecD 222 fecB 223 fecA 224 fecI 225 hsdR 226 yjjQ 227 fhuF 3 -> 4, 4 -> 5, 4 -> 6, 4 -> 7, 5 -> 6, 5 -> 7, 6 -> 7, 6 -> 8, 7 -> 8, 8 -> 9, 9 -> 10, 10 -> 11, 15 -> 16, 16 -> 17, 17 -> 18, 18 -> 19, 18 -> 20, 19 -> 20, 21 -> 22, 27 -> 28, 28 -> 29, 29 -> 30, 31 -> 32, 32 -> 33, 37 -> 38, 37 -> 39, 38 -> 39, 41 -> 42, 43 -> 44, 45 -> 46, 45 -> 47, 50 -> 51, 50 -> 52, 51 -> 52, 52 -> 53, 52 -> 54, 59 -> 60, 72 -> 73, 74 -> 75, 76 -> 77, 82 -> 83, 84 -> 85, 90 -> 91, 92 -> 93, 92 -> 94, 92 -> 95, 93 -> 94, 93 -> 95, 93 -> 96, 93 -> 97, 93 -> 98, 93 -> 99, 94 -> 95, 94 -> 96, 94 -> 97, 94 -> 98, 94 -> 99, 96 -> 97, 96 -> 98, 96 -> 99, 97 -> 98, 97 -> 99, 98 -> 99, 101 -> 102, 105 -> 106, 105 -> 107, 106 -> 107, 111 -> 112, 114 -> 115, 114 -> 116, 114 -> 117, 114 -> 118, 114 -> 119, 115 -> 116, 115 -> 117, 115 -> 118, 115 -> 119, 116 -> 117, 116 -> 118, 116 -> 119, 117 -> 118, 117 -> 119, 118 -> 119, 120 -> 121, 123 -> 124, 134 -> 135, 138 -> 139, 140 -> 141, 140 -> 142, 141 -> 142, 142 -> 143, 142 -> 144, 143 -> 144, 152 -> 153, 154 -> 155, 154 -> 156, 154 -> 157, 155 -> 156, 155 -> 157, 156 -> 157, 158 -> 159, 158 -> 160, 159 -> 160, 161 -> 162, 161 -> 163, 161 -> 164, 161 -> 165, 161 -> 166, 162 -> 163, 162 -> 164, 162 -> 165, 162 -> 166, 163 -> 164, 163 -> 165, 163 -> 166, 164 -> 165, 164 -> 166, 165 -> 166, 165 -> 167, 166 -> 167, 167 -> 168, 168 -> 169, 169 -> 170, 169 -> 171, 170 -> 171, 170 -> 172, 170 -> 173, 171 -> 172, 171 -> 173, 172 -> 173, 174 -> 175, 174 -> 176, 174 -> 177, 175 -> 176, 175 -> 177, 176 -> 177, 178 -> 179, 178 -> 180, 179 -> 180, 179 -> 181, 180 -> 181, 181 -> 182, 182 -> 183, 182 -> 184, 183 -> 184, 183 -> 185, 184 -> 185, 186 -> 187, 186 -> 188, 187 -> 188, 190 -> 191, 194 -> 195, 194 -> 196, 195 -> 196, 198 -> 199, 201 -> 202, 203 -> 204, 204 -> 205, 209 -> 210, 211 -> 212, 211 -> 213, 212 -> 213, 219 -> 220, 221 -> 222, 221 -> 223, 222 -> 223, 222 -> 224, 223 -> 224, 226 -> 227 * wt-fis inter-strain, high supercoiling, negative log ratio * 1 mog 2 dnaK 3 ispH 4 dapB 5 fixC 6 hepA 7 ftsZ 8 speD 9 speE 10 panB 11 hemL 12 frr 13 dinB 14 yafO 15 pepD 16 gpt 17 crl 18 yafY 19 afuB 20 ykgB 21 ykgI 22 yahO 23 codA 24 ybaD 25 nusB 26 pgpA 27 yajL 28 ybaB 29 recR 30 adk 31 ybaK 32 ybbN 33 allR 34 nfnB 35 ahpC 36 ahpF 37 lipB 38 ybeD 39 ybeB 40 ybeL 41 rihA 42 ybeZ 43 miaB 44 ubiF 45 nagB 46 ybfC 47 ybfD 48 ybgA 49 tolB 50 pal 51 galM 52 moaE 53 ybhL 54 ybiB 55 ybiC 56 dps 57 moeB 58 gsiD 59 potI 60 artI 61 macB 62 clpS 63 pflA 64 aroA 65 ycbL 66 aspC 67 asnS 68 ycbQ 69 ycbR 70 pyrD 71 pqiB 72 ompA 73 mgsA 74 putA 75 ghrA 76 ycdX 77 ycdY 78 ycdZ 79 grxB 80 rimJ 81 flgA 82 flgE 83 hinT 84 ycfL 85 ycfP 86 ycfQ 87 nagK 88 potD 89 potC 90 pepT 91 purB 92 hflD 93 ycgZ 94 ymgA 95 ycgM 96 dadA 97 ycgR 98 lolB 99 narL 100 narX 101 purU 102 tdk 103 adhE 104 oppA 105 trpA 106 trpB 107 yciV 108 yciN 109 pgpB 110 yciS 111 rnb 112 pspE 113 ycjP 114 ycjX 115 tpx 116 ynaJ 117 paaX 118 aldA 119 cybB 120 trg 121 mdoD 122 tehB 123 pptA 124 sfcA 125 sra 126 osmC 127 ydeS 128 dcp 129 ydfH 130 relE 131 relB 132 flxA 133 rspA 134 ynfD 135 ydgA 136 hdhA 137 add 138 gst 139 pdxH 140 anmK 141 slyB 142 sodC 143 sodB 144 ydhR 145 ydhT 146 pps 147 ydiA 148 btuE 149 ydiY 150 pfkB 151 ydiZ 152 xthA 153 ynjH 154 ydjA 155 yeaC 156 msrB 157 yoaB 158 yoaC 159 manY 160 kdgR 161 yebV 162 eda 163 pykA 164 ruvA 165 aspS 166 torZ 167 tar 168 motB 169 ftnA 170 fliC 171 yedF 172 yedI 173 hchA 174 amn 175 flu 176 hisD 177 hisC 178 hisH 179 hisF 180 hisI 181 gnd 182 wbbK 183 wcaM 184 wzxC 185 wcaI 186 gmd 187 yegD 188 yegP 189 ogrK 190 yegS 191 gatC 192 gatY 193 fbaB 194 yegV 195 dld 196 cdd 197 mglB 198 folE 199 yejK 200 eco 201 ubiG 202 glpQ 203 yfaY 204 yfbB 205 elaA 206 hisJ 207 fadJ 208 yfcZ 209 yfdZ 210 ypdH 211 glk 212 nupC 213 gltX 214 cysZ 215 ptsI 216 crr 217 pdxK 218 talA 219 nlpB 220 dapA 221 gcvR 222 upp 223 purM 224 guaB 225 sseA 226 pepB 227 yphC 228 glyA 229 glnB 230 yfhA 231 pdxJ 232 recO 233 lepB 234 yfiF 235 yfiQ 236 smpB 237 ygaF 238 hycI 239 rpoS 240 nlpD 241 ygcL 242 eno 243 sdaC 244 sdaB 245 recD 246 ptrA 247 ygeA 248 kduD 249 kduI 250 ygfJ 251 yqfB 252 speB 253 yggL 254 speC 255 glcB 256 yghU 257 yghB 258 mug 259 aer 260 yqjD 261 yhaV 262 yraM 263 infB 264 folP 265 gltB 266 gltD 267 mdh 268 yhdE 269 mreB 270 yhdH 271 prmA 272 mscL 273 slyD 274 yhfA 275 frlA 276 ompR 277 yhhM 278 tusA 279 rhsB 280 hdeA 281 yiaT 282 aldB 283 tdh 284 kbl 285 rfaZ 286 rfaY 287 rfaI 288 mutM 289 rph 290 yicC 291 dinD 292 ibpA 293 tnaA 294 yifN 295 hemC 296 uvrD 297 rdoA 298 dsbA 299 typA 300 pfkA 301 tpiA 302 yiiR 303 rraA 304 cytR 305 metB 306 yijP 307 oxyR 308 murB 309 aceB 310 arpA 311 pepE 312 ubiC 313 yjbQ 314 uvrA 315 yjdM 316 adiA 317 lysU 318 groS 319 ulaE 320 ytfA 321 fklB 322 treB 323 yjgB 324 fimA 325 fimI 326 yjiG 327 yjjA 328 prfC 1 -> 2, 3 -> 4, 8 -> 9, 13 -> 14, 13 -> 15, 13 -> 16, 14 -> 15, 14 -> 16, 15 -> 16, 15 -> 17, 16 -> 17, 20 -> 21, 24 -> 25, 24 -> 26, 25 -> 26, 28 -> 29, 28 -> 30, 29 -> 30, 35 -> 36, 37 -> 38, 42 -> 43, 42 -> 44, 43 -> 44, 46 -> 47, 46 -> 48, 47 -> 48, 49 -> 50, 52 -> 53, 54 -> 55, 59 -> 60, 61 -> 62, 65 -> 66, 65 -> 67, 66 -> 67, 68 -> 69, 71 -> 72, 75 -> 76, 75 -> 77, 75 -> 78, 76 -> 77, 76 -> 78, 77 -> 78, 79 -> 80, 80 -> 81, 81 -> 82, 83 -> 84, 83 -> 85, 84 -> 85, 85 -> 86, 87 -> 88, 87 -> 89, 89 -> 90, 90 -> 91, 90 -> 92, 91 -> 92, 93 -> 94, 96 -> 97, 101 -> 102, 102 -> 103, 103 -> 104, 105 -> 106, 106 -> 107, 109 -> 110, 112 -> 113, 114 -> 115, 118 -> 119, 118 -> 120, 119 -> 120, 120 -> 121, 121 -> 122, 124 -> 125, 124 -> 126, 125 -> 126, 128 -> 129, 130 -> 131, 130 -> 132, 131 -> 132, 133 -> 134, 136 -> 137, 138 -> 139, 138 -> 140, 138 -> 141, 139 -> 140, 139 -> 141, 140 -> 141, 140 -> 142, 141 -> 142, 144 -> 145, 146 -> 147, 149 -> 150, 149 -> 151, 150 -> 151, 155 -> 156, 157 -> 158, 162 -> 163, 164 -> 165, 165 -> 166, 167 -> 168, 177 -> 178, 177 -> 179, 177 -> 180, 178 -> 179, 178 -> 180, 178 -> 181, 180 -> 181, 181 -> 182, 183 -> 184, 184 -> 185, 185 -> 186, 188 -> 189, 188 -> 190, 189 -> 190, 190 -> 191, 191 -> 192, 191 -> 193, 192 -> 193, 192 -> 194, 193 -> 194, 197 -> 198, 204 -> 205, 207 -> 208, 210 -> 211, 210 -> 212, 211 -> 212, 214 -> 215, 214 -> 216, 214 -> 217, 215 -> 216, 215 -> 217, 216 -> 217, 219 -> 220, 219 -> 221, 220 -> 221, 222 -> 223, 225 -> 226, 228 -> 229, 228 -> 230, 229 -> 230, 231 -> 232, 231 -> 233, 232 -> 233, 234 -> 235, 239 -> 240, 243 -> 244, 245 -> 246, 247 -> 248, 247 -> 249, 248 -> 249, 253 -> 254, 258 -> 259, 265 -> 266, 268 -> 269, 269 -> 270, 270 -> 271, 277 -> 278, 281 -> 282, 283 -> 284, 285 -> 286, 285 -> 287, 286 -> 287, 288 -> 289, 289 -> 290, 289 -> 291, 290 -> 291, 297 -> 298, 300 -> 301, 300 -> 302, 301 -> 302, 303 -> 304, 304 -> 305, 309 -> 310, 313 -> 314, 319 -> 320, 320 -> 321, 324 -> 325 * wt-fis inter-strain, low supercoiling, positive log ratio * 1 thrA 2 leuA 3 mraW 4 ftsL 5 ftsI 6 murD 7 murC 8 aceF 9 degP 10 map 11 frmA 12 tauC 13 fepA 14 entS 15 ybdB 16 citE 17 pnuC 18 ybjC 19 nfsA 20 artQ 21 smtA 22 mukF 23 mukE 24 ycdO 25 bssS 26 flgN 27 flgM 28 flgJ 29 plsX 30 prfA 31 galU 32 tonB 33 yciA 34 sapB 35 puuR 36 ycjO 37 ycjZ 38 racR 39 paaI 40 ynbB 41 ynbD 42 ydcR 43 ydcX 44 yncE 45 yddH 46 yddB 47 ydeR 48 hipA 49 marR 50 marA 51 ydfJ 52 ydfR 53 flxA 54 ydfD 55 ynfF 56 ynfK 57 mdtJ 58 ydhO 59 purR 60 ydhR 61 pheS 62 infC 63 thrS 64 chbG 65 ves 66 topB 67 znuA 68 flhB 69 cheZ 70 cheB 71 motA 72 yecR 73 fliZ 74 amyA 75 fliE 76 fliF 77 fliG 78 fliL 79 fliM 80 fliP 81 fliQ 82 yedW 83 yeeV 84 yehS 85 sanA 86 yojI 87 ompC 88 inaA 89 yfcO 90 yfdG 91 yfdH 92 yfeA 93 zipA 94 yfgG 95 yfgA 96 iscX 97 hscA 98 iscA 99 iscU 100 iscS 101 ygaZ 102 ygaH 103 hydN 104 recC 105 nudH 106 galR 107 pgk 108 exbD 109 exbB 110 mdaB 111 dnaG 112 yhaH 113 secG 114 sspB 115 rpsI 116 yrdD 117 secY 118 rplP 119 rplD 120 feoA 121 hdeD 122 rpmG 123 spoT 124 ibpA 125 bglG 126 glmS 127 atpG 128 gpp 129 rffD 130 rffG 131 yifK 132 ubiB 133 pepQ 134 trkH 135 sodA 136 kdgT 137 phnI 138 yjeJ 139 fecB 140 fecA 141 fhuF 142 deoB 4 -> 5, 5 -> 6, 6 -> 7, 22 -> 23, 26 -> 27, 32 -> 33, 40 -> 41, 47 -> 48, 49 -> 50, 53 -> 54, 55 -> 56, 58 -> 59, 61 -> 62, 61 -> 63, 62 -> 63, 68 -> 69, 68 -> 70, 69 -> 70, 75 -> 76, 75 -> 77, 77 -> 78, 77 -> 79, 78 -> 79, 78 -> 80, 78 -> 81, 79 -> 80, 79 -> 81, 80 -> 81, 86 -> 87, 96 -> 97, 96 -> 98, 96 -> 99, 96 -> 100, 97 -> 98, 97 -> 99, 97 -> 100, 98 -> 99, 98 -> 100, 99 -> 100, 108 -> 109, 114 -> 115, 117 -> 118, 118 -> 119, 126 -> 127, 129 -> 130, 133 -> 134, 135 -> 136, 139 -> 140 * wt-fis inter-strain, low supercoiling, negative log ratio * 1 yaaA 2 mog 3 hepA 4 speD 5 speE 6 yadI 7 hemL 8 yaeR 9 rcsF 10 gmhB 11 dnaQ 12 yafK 13 yafL 14 dinB 15 prfH 16 proA 17 yagB 18 ykgB 19 ykgI 20 yahG 21 insE-2 22 sbcC 23 sbcD 24 yajC 25 xseB 26 yajL 27 yajQ 28 ppiD 29 tesB 30 maa 31 adk 32 ybbN 33 ybbA 34 allR 35 gcl 36 purE 37 nfrA 38 nfnB 39 ahpC 40 citX 41 ybeF 42 ybeD 43 ybeL 44 ybeR 45 nagA 46 nagB 47 rhsC 48 ybfC 49 ybgA 50 tolB 51 pal 52 ybgF 53 galT 54 ybhA 55 ybhL 56 ybiC 57 ompX 58 moeB 59 gsiC 60 ybjT 61 clpA 62 cydC 63 ycaO 64 aroA 65 ycaR 66 ycbK 67 ycbQ 68 ycbW 69 ompA 70 rutC 71 ghrA 72 ycdX 73 ycdY 74 csgA 75 ymdB 76 grxB 77 mdtH 78 rimJ 79 hinT 80 mfd 81 nagK 82 purB 83 hflD 84 ymfL 85 ycgF 86 ycgZ 87 ymgA 88 ymgB 89 emtA 90 narL 91 narX 92 trpA 93 puuA 94 tpx 95 mpaA 96 abgB 97 paaB 98 mdoD 99 yddE 100 ydeK 101 dcp 102 ydfG 103 ynfA 104 manA 105 malX 106 malY 107 gst 108 anmK 109 gloA 110 sodB 111 ydiJ 112 ydiA 113 pfkB 114 ydiZ 115 ydjA 116 ydjJ 117 yoaB 118 purT 119 ruvA 120 yecM 121 ftnA 122 yedA 123 cbl 124 erfK 125 hisI 126 wcaM 127 cpsB 128 dcd 129 yegD 130 baeS 131 fbaB 132 dld 133 yohK 134 mglC 135 folE 136 setB 137 yfaY 138 elaA 139 hisJ 140 yfdQ 141 yfdZ 142 talA 143 ypfG 144 aegA 145 glyA 146 yfiC 147 ypjF 148 ygaF 149 stpA 150 gutQ 151 nlpD 152 queF 153 recB 154 ptrA 155 mutH 156 ygdR 157 ygeA 158 kduD 159 kduI 160 xdhD 161 yggG 162 yqgF 163 speC 164 yghU 165 hybD 166 yghX 167 ygiB 168 ygiC 169 mug 170 ygjK 171 yqjE 172 yhaO 173 tdcA 174 garR 175 sohA 176 yhaV 177 yraR 178 elbB 179 gltB 180 gltD 181 argR 182 aaeX 183 panF 184 prmA 185 yrdA 186 yhdN 187 fkpA 188 yhgA 189 yhhW 190 yhhX 191 prlC 192 dppB 193 xylF 194 aldB 195 yicC 196 dinD 197 cbrA 198 dgoR 199 tnaB 200 yidZ 201 hdfR 202 rep 203 rhtB 204 yiiM 205 pfkA 206 tpiA 207 rraA 208 oxyR 209 nfi 210 purD 211 soxS 212 acs 213 adiC 214 yjdI 215 lysU 216 yjdL 217 poxA 218 ulaG 219 fklB 220 msrA 221 ytfN 222 pmbA 223 yjhH 224 yjhQ 225 fimA 226 fimI 227 hsdS 228 hsdM 229 yjjQ 230 lplA 231 nadR 232 slt 233 rob 234 creA 1 -> 2, 4 -> 5, 9 -> 10, 12 -> 13, 13 -> 14, 14 -> 15, 18 -> 19, 25 -> 26, 25 -> 27, 26 -> 27, 29 -> 30, 32 -> 33, 34 -> 35, 41 -> 42, 43 -> 44, 45 -> 46, 47 -> 48, 48 -> 49, 50 -> 51, 50 -> 52, 51 -> 52, 61 -> 62, 63 -> 64, 71 -> 72, 71 -> 73, 72 -> 73, 72 -> 74, 73 -> 74, 74 -> 75, 76 -> 77, 76 -> 78, 77 -> 78, 80 -> 81, 82 -> 83, 85 -> 86, 85 -> 87, 85 -> 88, 86 -> 87, 86 -> 88, 87 -> 88, 94 -> 95, 101 -> 102, 105 -> 106, 107 -> 108, 113 -> 114, 123 -> 124, 142 -> 143, 142 -> 144, 143 -> 144, 155 -> 156, 157 -> 158, 157 -> 159, 158 -> 159, 164 -> 165, 167 -> 168, 173 -> 174, 174 -> 175, 174 -> 176, 175 -> 176, 178 -> 179, 179 -> 180, 181 -> 182, 183 -> 184, 189 -> 190, 195 -> 196, 197 -> 198, 199 -> 200, 204 -> 205, 205 -> 206, 214 -> 215, 214 -> 216, 215 -> 216, 220 -> 221, 225 -> 226, 230 -> 231, 231 -> 232, 232 -> 233, 232 -> 234, 233 -> 234 * wt-hns inter-strain, high supercoiling, positive log ratio * 1 yaaW 2 polB 3 fhuC 4 hlpA 5 intF 6 codA 7 mhpD 8 sbmA 9 queC 10 acrA 11 dnaX 12 ybaT 13 nagA 14 bioB 15 moaE 16 ybjJ 17 dmsC 18 msbA 19 ompF 20 asnS 21 torS 22 mviN 23 flgN 24 flgM 25 flgA 26 flgB 27 flgC 28 flgD 29 flgE 30 flgF 31 flgG 32 flgH 33 flgI 34 flgJ 35 flgK 36 holB 37 ymfK 38 prfA 39 chaA 40 hns 41 yciA 42 yciQ 43 puuR 44 ycjO 45 paaI 46 ynbB 47 ynbD 48 ydcR 49 ydcX 50 yncD 51 yddH 52 narV 53 yddJ 54 yddB 55 ydeR 56 hipA 57 yneG 58 ydfJ 59 essQ 60 ydiR 61 astB 62 yebQ 63 flhE 64 flhA 65 flhB 66 cheY 67 motB 68 yecR 69 dcyD 70 fliY 71 fliZ 72 fliA 73 fliC 74 fliD 75 fliS 76 yedK 77 yedM 78 fliE 79 fliF 80 fliG 81 fliH 82 fliJ 83 fliK 84 fliL 85 fliM 86 fliN 87 fliO 88 fliQ 89 fliR 90 yehX 91 mqo 92 atoA 93 ubiG 94 inaA 95 yfbB 96 purC 97 hcaC 98 yfhK 99 yfiP 100 nrdH 101 fhlA 102 mutS 103 ftsB 104 kduD 105 lysS 106 yqgF 107 yghR 108 parE 109 ygjD 110 dnaG 111 rpsO 112 rbfA 113 yhcH 114 nanA 115 rplM 116 degQ 117 yhdH 118 rpoA 119 fusA 120 fic 121 malP 122 glpG 123 ftsY 124 yhjH 125 dppF 126 cspA 127 yiaJ 128 envC 129 rpmG 130 gmk 131 trmH 132 dnaN 133 dnaA 134 wzxE 135 rmuC 136 tatA 137 tatD 138 yigZ 139 dtd 140 frvR 141 yiiU 142 frwC 143 trmA 144 btuB 145 murB 146 plsB 147 nsrR 148 yjfN 149 ulaA 150 ytfT 151 treC 152 treB 153 deoD 19 -> 20, 22 -> 23, 22 -> 24, 22 -> 25, 22 -> 26, 22 -> 27, 22 -> 28, 22 -> 29, 22 -> 30, 23 -> 24, 23 -> 25, 23 -> 26, 23 -> 27, 23 -> 28, 23 -> 29, 23 -> 30, 23 -> 31, 24 -> 25, 24 -> 26, 24 -> 27, 24 -> 28, 24 -> 29, 24 -> 30, 24 -> 31, 25 -> 26, 25 -> 27, 25 -> 28, 25 -> 29, 25 -> 30, 25 -> 31, 25 -> 32, 26 -> 27, 26 -> 28, 26 -> 29, 26 -> 30, 26 -> 31, 26 -> 32, 26 -> 33, 27 -> 28, 27 -> 29, 27 -> 30, 27 -> 31, 27 -> 32, 27 -> 33, 28 -> 29, 28 -> 30, 28 -> 31, 28 -> 32, 28 -> 33, 28 -> 34, 29 -> 30, 29 -> 31, 29 -> 32, 29 -> 33, 29 -> 34, 29 -> 35, 30 -> 31, 30 -> 32, 30 -> 33, 30 -> 34, 30 -> 35, 31 -> 32, 31 -> 33, 31 -> 34, 31 -> 35, 32 -> 33, 32 -> 34, 32 -> 35, 33 -> 34, 33 -> 35, 34 -> 35, 38 -> 39, 46 -> 47, 49 -> 50, 51 -> 52, 55 -> 56, 63 -> 64, 63 -> 65, 63 -> 66, 65 -> 66, 69 -> 70, 69 -> 71, 69 -> 72, 69 -> 73, 69 -> 74, 70 -> 71, 70 -> 72, 70 -> 73, 70 -> 74, 70 -> 75, 71 -> 72, 71 -> 73, 71 -> 74, 71 -> 75, 72 -> 73, 72 -> 74, 72 -> 75, 73 -> 74, 73 -> 75, 74 -> 75, 74 -> 76, 75 -> 76, 76 -> 77, 76 -> 78, 76 -> 79, 76 -> 80, 77 -> 78, 77 -> 79, 77 -> 80, 77 -> 81, 78 -> 79, 78 -> 80, 78 -> 81, 78 -> 82, 81 -> 82, 81 -> 83, 81 -> 84, 81 -> 85, 81 -> 86, 81 -> 87, 83 -> 84, 83 -> 85, 83 -> 86, 83 -> 87, 83 -> 88, 83 -> 89, 84 -> 85, 84 -> 86, 84 -> 87, 84 -> 88, 84 -> 89, 86 -> 87, 86 -> 88, 86 -> 89, 87 -> 88, 87 -> 89, 88 -> 89, 101 -> 102, 109 -> 110, 111 -> 112, 113 -> 114, 114 -> 115, 115 -> 116, 130 -> 131, 132 -> 133, 135 -> 136, 135 -> 137, 136 -> 137, 143 -> 144, 148 -> 149, 151 -> 152 * wt-hns inter-strain, high supercoiling, negative log ratio * 1 dnaK 2 mokC 3 fixB 4 fixC 5 pdxA 6 leuO 7 yacH 8 speD 9 yadC 10 yadL 11 yadN 12 sfsA 13 dgt 14 degP 15 yafT 16 prfH 17 yagL 18 yagM 19 yagU 20 yagW 21 yagX 22 yagZ 23 ykgA 24 ykgB 25 ykgI 26 ykgF 27 ykgH 28 yahA 29 yahB 30 yahH 31 yahI 32 yaiP 33 tauA 34 tauB 35 iraP 36 ykiA 37 malZ 38 cyoC 39 bolA 40 lon 41 maa 42 hha 43 ybaJ 44 ybbJ 45 rhsD 46 ybbD 47 allA 48 glxR 49 ybbW 50 allB 51 ylbA 52 allC 53 allD 54 sfmC 55 ybcC 56 emrE 57 ybcK 58 ybcL 59 ybcM 60 nmpC 61 borD 62 ybcW 63 ybdG 64 ybdJ 65 ybdM 66 ybdO 67 citA 68 dcuC 69 pagP 70 ybeZ 71 ybfG 72 ybfH 73 ybfD 74 sdhA 75 sdhB 76 tolA 77 ybhM 78 dps 79 yliL 80 yliF 81 ybjG 82 cmr 83 ybjL 84 ybjC 85 ybjN 86 hcr 87 aat 88 ftsK 89 ycaN 90 pflB 91 ycbQ 92 ycbR 93 ycbS 94 ymcC 95 cspG 96 yccM 97 yccE 98 pgaD 99 pgaC 100 ycdU 101 csgG 102 csgE 103 csgD 104 csgB 105 csgA 106 mdoC 107 mdoG 108 yceI 109 yceJ 110 bssS 111 rluC 112 potC 113 icd 114 ymfE 115 lit 116 mcrA 117 ycgX 118 ycgZ 119 ymgA 120 ymgB 121 ymgD 122 ymgG 123 hlyE 124 dadX 125 ycgV 126 hemA 127 tdk 128 oppC 129 yciE 130 yciF 131 osmB 132 gmr 133 ycjQ 134 ynaI 135 abgR 136 ydaL 137 intR 138 recT 139 ydaT 140 ynaK 141 ydaY 142 pinR 143 ynaE 144 paaB 145 yncH 146 ydcD 147 yncI 148 ydcC 149 pptA 150 yddK 151 bdm 152 osmC 153 yddV 154 gadC 155 pqqL 156 ydeO 157 ydeP 158 ydeQ 159 ydeS 160 ydeK 161 yneK 162 ydeH 163 ydeI 164 ydfO 165 gnsB 166 ynfN 167 cspI 168 cspB 169 ydfV 170 ynfC 171 mdtI 172 mdtJ 173 rstA 174 fumC 175 hdhA 176 rsxB 177 rsxD 178 slyA 179 ydiB 180 aroD 181 ydiF 182 ydiO 183 ydiA 184 aroH 185 pheM 186 katE 187 chbG 188 chbF 189 chbR 190 ynjI 191 ydjH 192 ydjI 193 ydjJ 194 yeaE 195 yeaJ 196 yoaC 197 yebN 198 cspC 199 yobF 200 ptrB 201 znuB 202 ruvA 203 yecD 204 torZ 205 torY 206 yecT 207 otsA 208 araH 209 araG 210 ftnB 211 ftnA 212 uvrC 213 intG 214 rcsA 215 vsr 216 hchA 217 yedV 218 yedW 219 yodA 220 yodB 221 shiA 222 yeeN 223 yeeW 224 yeeE 225 ugd 226 gnd 227 wbbJ 228 wbbI 229 rfc 230 glf 231 rfbX 232 rfbC 233 rfbA 234 rfbB 235 wcaM 236 wcaL 237 wcaK 238 wzxC 239 wcaJ 240 cpsG 241 cpsB 242 wcaI 243 nudD 244 fcl 245 gmd 246 wcaF 247 wcaE 248 wcaD 249 wcaC 250 wcaB 251 wcaA 252 wzc 253 wzb 254 wza 255 yegI 256 yegJ 257 mdtD 258 yegZ 259 yegR 260 yegS 261 gatD 262 gatC 263 gatA 264 yegW 265 yehL 266 yehM 267 yeiT 268 galS 269 yeiG 270 yeiH 271 rihB 272 yfaQ 273 yfaU 274 nudI 275 arnB 276 arnC 277 arnT 278 elaC 279 yfbP 280 folX 281 yfdP 282 dsdX 283 emrY 284 emrK 285 oxc 286 ypdE 287 xapR 288 xapB 289 cysW 290 eutB 291 eutN 292 eutD 293 yffB 294 yfgH 295 ndk 296 yphE 297 rseB 298 rseA 299 yfiC 300 clpB 301 yfiR 302 yfiB 303 yfjK 304 yfjL 305 yfjO 306 stpA 307 ygaX 308 pphB 309 ygbT 310 ygcI 311 ygcJ 312 ygcK 313 ygcL 314 ygcG 315 fucI 316 fucU 317 ygdR 318 kduI 319 yqeI 320 yqeJ 321 ygeL 322 ygeQ 323 ygeW 324 yqeA 325 galP 326 pitB 327 hybB 328 ygiL 329 yqiH 330 glgS 331 yqiJ 332 bacA 333 uxaA 334 yqjK 335 tdcF 336 tdcD 337 tdcC 338 tdcB 339 yhaB 340 garL 341 agaA 342 agaC 343 yraH 344 yraI 345 mtr 346 gltF 347 acrE 348 acrF 349 gspD 350 gspE 351 gspG 352 gspH 353 yhfK 354 yhfL 355 hslR 356 yhhI 357 yhiK 358 slp 359 dctR 360 hdeB 361 hdeA 362 gadE 363 gadW 364 gadA 365 yhjB 366 bcsZ 367 yhjR 368 bcsE 369 bcsF 370 yiaA 371 yiaN 372 sgbU 373 yiaT 374 yiaU 375 yiaV 376 yiaW 377 aldB 378 rhsA 379 yibA 380 yibJ 381 kbl 382 htrL 383 pyrE 384 ade 385 tnaA 386 yieL 387 rbsD 388 yigF 389 rarD 390 metE 391 yihN 392 ompL 393 yihO 394 yihQ 395 yiiG 396 yiiS 397 uspD 398 pflD 399 yjbE 400 yjbM 401 nrfB 402 mdtP 403 alsB 404 adiC 405 cadA 406 cadB 407 fxsA 408 yjeJ 409 blc 410 poxA 411 yjeM 412 yjeN 413 yjfJ 414 yjfK 415 yjfL 416 ulaR 417 yjfZ 418 cycA 419 yjgM 420 yjgN 421 idnO 422 idnK 423 yjhB 424 yjhC 425 fecB 426 fecA 427 yjhF 428 yjhG 429 yjhH 430 yjhI 431 yjhP 432 nanC 433 fimB 434 fimE 435 fimA 436 fimI 437 fimD 438 fimG 439 mdtM 440 mcrC 441 mcrB 442 yjiW 1 -> 2, 3 -> 4, 7 -> 8, 9 -> 10, 10 -> 11, 11 -> 12, 13 -> 14, 17 -> 18, 19 -> 20, 19 -> 21, 21 -> 22, 23 -> 24, 23 -> 25, 24 -> 25, 24 -> 26, 25 -> 26, 26 -> 27, 28 -> 29, 30 -> 31, 32 -> 33, 32 -> 34, 33 -> 34, 39 -> 40, 41 -> 42, 41 -> 43, 42 -> 43, 45 -> 46, 45 -> 47, 46 -> 47, 47 -> 48, 47 -> 49, 48 -> 49, 48 -> 50, 49 -> 50, 49 -> 51, 49 -> 52, 50 -> 51, 50 -> 52, 50 -> 53, 51 -> 52, 51 -> 53, 52 -> 53, 55 -> 56, 55 -> 57, 55 -> 58, 56 -> 57, 56 -> 58, 56 -> 59, 57 -> 58, 57 -> 59, 58 -> 59, 58 -> 60, 59 -> 60, 60 -> 61, 60 -> 62, 61 -> 62, 63 -> 64, 65 -> 66, 67 -> 68, 67 -> 69, 68 -> 69, 71 -> 72, 74 -> 75, 78 -> 79, 81 -> 82, 81 -> 83, 82 -> 83, 83 -> 84, 83 -> 85, 84 -> 85, 89 -> 90, 91 -> 92, 91 -> 93, 92 -> 93, 94 -> 95, 94 -> 96, 95 -> 96, 98 -> 99, 100 -> 101, 101 -> 102, 101 -> 103, 101 -> 104, 101 -> 105, 102 -> 103, 102 -> 104, 102 -> 105, 103 -> 104, 103 -> 105, 103 -> 106, 104 -> 105, 104 -> 106, 104 -> 107, 105 -> 106, 105 -> 107, 106 -> 107, 108 -> 109, 108 -> 110, 109 -> 110, 113 -> 114, 113 -> 115, 114 -> 115, 116 -> 117, 116 -> 118, 116 -> 119, 117 -> 118, 117 -> 119, 117 -> 120, 118 -> 119, 118 -> 120, 119 -> 120, 121 -> 122, 129 -> 130, 131 -> 132, 135 -> 136, 137 -> 138, 139 -> 140, 139 -> 141, 142 -> 143, 145 -> 146, 145 -> 147, 145 -> 148, 146 -> 147, 146 -> 148, 146 -> 149, 147 -> 148, 147 -> 149, 148 -> 149, 151 -> 152, 153 -> 154, 154 -> 155, 156 -> 157, 156 -> 158, 156 -> 159, 157 -> 158, 157 -> 159, 158 -> 159, 162 -> 163, 164 -> 165, 164 -> 166, 164 -> 167, 164 -> 168, 165 -> 166, 165 -> 167, 165 -> 168, 166 -> 167, 166 -> 168, 167 -> 168, 168 -> 169, 173 -> 174, 176 -> 177, 179 -> 180, 179 -> 181, 179 -> 182, 180 -> 181, 180 -> 182, 181 -> 182, 183 -> 184, 186 -> 187, 186 -> 188, 186 -> 189, 187 -> 188, 187 -> 189, 188 -> 189, 191 -> 192, 191 -> 193, 192 -> 193, 197 -> 198, 197 -> 199, 198 -> 199, 201 -> 202, 202 -> 203, 203 -> 204, 204 -> 205, 204 -> 206, 205 -> 206, 207 -> 208, 207 -> 209, 208 -> 209, 208 -> 210, 209 -> 210, 209 -> 211, 210 -> 211, 211 -> 212, 215 -> 216, 216 -> 217, 216 -> 218, 216 -> 219, 217 -> 218, 217 -> 219, 217 -> 220, 218 -> 219, 218 -> 220, 219 -> 220, 221 -> 222, 225 -> 226, 225 -> 227, 226 -> 227, 226 -> 228, 226 -> 229, 228 -> 229, 228 -> 230, 228 -> 231, 228 -> 232, 228 -> 233, 229 -> 230, 229 -> 231, 229 -> 232, 229 -> 233, 229 -> 234, 230 -> 231, 230 -> 232, 230 -> 233, 230 -> 234, 232 -> 233, 232 -> 234, 232 -> 235, 233 -> 234, 233 -> 235, 233 -> 236, 234 -> 235, 234 -> 236, 234 -> 237, 235 -> 236, 235 -> 237, 235 -> 238, 235 -> 239, 237 -> 238, 237 -> 239, 237 -> 240, 237 -> 241, 238 -> 239, 238 -> 240, 238 -> 241, 238 -> 242, 239 -> 240, 239 -> 241, 239 -> 242, 239 -> 243, 239 -> 244, 240 -> 241, 240 -> 242, 240 -> 243, 240 -> 244, 240 -> 245, 241 -> 242, 241 -> 243, 241 -> 244, 241 -> 245, 241 -> 246, 241 -> 247, 243 -> 244, 243 -> 245, 243 -> 246, 243 -> 247, 243 -> 248, 243 -> 249, 244 -> 245, 244 -> 246, 244 -> 247, 244 -> 248, 244 -> 249, 244 -> 250, 245 -> 246, 245 -> 247, 245 -> 248, 245 -> 249, 245 -> 250, 245 -> 251, 246 -> 247, 246 -> 248, 246 -> 249, 246 -> 250, 246 -> 251, 246 -> 252, 247 -> 248, 247 -> 249, 247 -> 250, 247 -> 251, 247 -> 252, 250 -> 251, 250 -> 252, 250 -> 253, 250 -> 254, 251 -> 252, 251 -> 253, 251 -> 254, 252 -> 253, 252 -> 254, 253 -> 254, 255 -> 256, 257 -> 258, 258 -> 259, 258 -> 260, 258 -> 261, 259 -> 260, 259 -> 261, 259 -> 262, 260 -> 261, 260 -> 262, 260 -> 263, 261 -> 262, 261 -> 263, 262 -> 263, 265 -> 266, 268 -> 269, 269 -> 270, 270 -> 271, 274 -> 275, 274 -> 276, 275 -> 276, 275 -> 277, 276 -> 277, 281 -> 282, 282 -> 283, 282 -> 284, 283 -> 284, 287 -> 288, 291 -> 292, 297 -> 298, 297 -> 299, 298 -> 299, 301 -> 302, 304 -> 305, 309 -> 310, 309 -> 311, 309 -> 312, 309 -> 313, 310 -> 311, 310 -> 312, 310 -> 313, 311 -> 312, 311 -> 313, 315 -> 316, 318 -> 319, 321 -> 322, 323 -> 324, 328 -> 329, 329 -> 330, 329 -> 331, 330 -> 331, 335 -> 336, 335 -> 337, 335 -> 338, 336 -> 337, 336 -> 338, 336 -> 339, 337 -> 338, 337 -> 339, 338 -> 339, 339 -> 340, 341 -> 342, 342 -> 343, 342 -> 344, 343 -> 344, 347 -> 348, 349 -> 350, 349 -> 351, 349 -> 352, 350 -> 351, 350 -> 352, 351 -> 352, 358 -> 359, 358 -> 360, 358 -> 361, 358 -> 362, 359 -> 360, 359 -> 361, 359 -> 362, 360 -> 361, 360 -> 362, 361 -> 362, 362 -> 363, 363 -> 364, 364 -> 365, 367 -> 368, 367 -> 369, 371 -> 372, 372 -> 373, 372 -> 374, 372 -> 375, 372 -> 376, 372 -> 377, 373 -> 374, 373 -> 375, 373 -> 376, 373 -> 377, 375 -> 376, 375 -> 377, 376 -> 377, 378 -> 379, 378 -> 380, 379 -> 380, 381 -> 382, 388 -> 389, 391 -> 392, 391 -> 393, 391 -> 394, 392 -> 393, 392 -> 394, 393 -> 394, 396 -> 397, 405 -> 406, 407 -> 408, 408 -> 409, 409 -> 410, 410 -> 411, 410 -> 412, 411 -> 412, 413 -> 414, 413 -> 415, 414 -> 415, 417 -> 418, 419 -> 420, 421 -> 422, 423 -> 424, 425 -> 426, 426 -> 427, 427 -> 428, 427 -> 429, 427 -> 430, 428 -> 429, 428 -> 430, 429 -> 430, 432 -> 433, 432 -> 434, 432 -> 435, 432 -> 436, 433 -> 434, 433 -> 435, 433 -> 436, 433 -> 437, 434 -> 435, 434 -> 436, 434 -> 437, 435 -> 436, 435 -> 437, 435 -> 438, 436 -> 437, 436 -> 438, 437 -> 438, 440 -> 441, 440 -> 442, 441 -> 442 * wt-hns inter-strain, low supercoiling, positive log ratio * 1 yaaY 2 rihC 3 caiA 4 nadC 5 yadD 6 fhuA 7 fhuC 8 dnaE 9 metI 10 yafD 11 yafS 12 ykfF 13 betA 14 betB 15 betI 16 prpD 17 cynT 18 frmB 19 phoR 20 ribD 21 acrA 22 ybcJ 23 sfmF 24 entA 25 ybdB 26 cstA 27 citE 28 dacA 29 djlB 30 gltK 31 miaB 32 nagA 33 ybfF 34 kdpB 35 tolB 36 ybgS 37 galE 38 uvrB 39 moaB 40 ybiB 41 rumB 42 msbA 43 kdsB 44 ompF 45 ssuC 46 rutD 47 rutB 48 ghrA 49 mdtG 50 flgN 51 flgM 52 flgA 53 flgB 54 flgC 55 flgD 56 flgE 57 flgF 58 flgG 59 flgH 60 flgI 61 flgJ 62 yceG 63 ycfH 64 ycfR 65 lolD 66 ychQ 67 ychJ 68 hns 69 yciA 70 trpD 71 puuP 72 puuR 73 ycjO 74 ydcR 75 yncD 76 hipA 77 ydeA 78 ydfJ 79 essQ 80 ydfB 81 add 82 tppB 83 sufC 84 sufA 85 chbB 86 ynjF 87 yebW 88 flhB 89 tar 90 motB 91 yecR 92 fliZ 93 fliA 94 fliC 95 fliD 96 fliS 97 fliE 98 fliF 99 fliG 100 fliH 101 fliJ 102 fliK 103 fliL 104 fliM 105 fliN 106 fliQ 107 dcm 108 yeeE 109 hisH 110 lysP 111 yojI 112 yfaL 113 yfdZ 114 yfeX 115 intZ 116 ypfJ 117 xseA 118 hscA 119 purL 120 lepA 121 ung 122 ypjF 123 ygaX 124 gshA 125 mltB 126 hycI 127 hypC 128 ygbE 129 relA 130 yqcC 131 ygdI 132 ygdL 133 amiC 134 yghQ 135 yqhC 136 mqsR 137 parE 138 yqjF 139 yraQ 140 yhbW 141 rplU 142 ispB 143 gltD 144 rng 145 rpsC 146 rpsS 147 rpsJ 148 kefB 149 damX 150 yrfD 151 nudE 152 yrfF 153 gntX 154 glpG 155 nikC 156 yhiP 157 arsR 158 cspA 159 yibI 160 ilvN 161 rho 162 rffD 163 wzxE 164 wzyE 165 yifK 166 xerC 167 metR 168 ysgA 169 tatD 170 fsaB 171 fabR 172 rplK 173 rplL 174 ubiC 175 alsK 176 rpsR 177 ytfT 178 yjgA 179 fecR 180 tsr 181 ytjB 182 yjjY 6 -> 7, 10 -> 11, 13 -> 14, 13 -> 15, 14 -> 15, 24 -> 25, 24 -> 26, 25 -> 26, 38 -> 39, 42 -> 43, 46 -> 47, 50 -> 51, 50 -> 52, 50 -> 53, 50 -> 54, 50 -> 55, 50 -> 56, 50 -> 57, 50 -> 58, 51 -> 52, 51 -> 53, 51 -> 54, 51 -> 55, 51 -> 56, 51 -> 57, 51 -> 58, 52 -> 53, 52 -> 54, 52 -> 55, 52 -> 56, 52 -> 57, 52 -> 58, 52 -> 59, 53 -> 54, 53 -> 55, 53 -> 56, 53 -> 57, 53 -> 58, 53 -> 59, 53 -> 60, 54 -> 55, 54 -> 56, 54 -> 57, 54 -> 58, 54 -> 59, 54 -> 60, 55 -> 56, 55 -> 57, 55 -> 58, 55 -> 59, 55 -> 60, 55 -> 61, 56 -> 57, 56 -> 58, 56 -> 59, 56 -> 60, 56 -> 61, 57 -> 58, 57 -> 59, 57 -> 60, 57 -> 61, 58 -> 59, 58 -> 60, 58 -> 61, 59 -> 60, 59 -> 61, 60 -> 61, 62 -> 63, 67 -> 68, 71 -> 72, 83 -> 84, 88 -> 89, 89 -> 90, 92 -> 93, 92 -> 94, 92 -> 95, 92 -> 96, 93 -> 94, 93 -> 95, 93 -> 96, 94 -> 95, 94 -> 96, 95 -> 96, 97 -> 98, 97 -> 99, 97 -> 100, 97 -> 101, 100 -> 101, 100 -> 102, 100 -> 103, 100 -> 104, 100 -> 105, 102 -> 103, 102 -> 104, 102 -> 105, 102 -> 106, 103 -> 104, 103 -> 105, 103 -> 106, 105 -> 106, 131 -> 132, 131 -> 133, 132 -> 133, 136 -> 137, 141 -> 142, 145 -> 146, 145 -> 147, 146 -> 147, 149 -> 150, 150 -> 151, 150 -> 152, 151 -> 152, 161 -> 162, 162 -> 163, 163 -> 164, 163 -> 165, 164 -> 165, 167 -> 168, 172 -> 173, 177 -> 178 * wt-hns inter-strain, low supercoiling, negative log ratio * 1 dnaK 2 yabP 3 yadL 4 yafJ 5 proB 6 yagG 7 yagT 8 yagX 9 yagZ 10 ykgK 11 ykgA 12 ykgB 13 ykgI 14 ykgF 15 yahA 16 tauA 17 ykiA 18 tgt 19 maa 20 ybaJ 21 ybbL 22 rhsD 23 ybbD 24 allC 25 emrE 26 nmpC 27 borD 28 ybcW 29 nfnB 30 fepE 31 citA 32 pagP 33 ybfD 34 ybgD 35 ybhM 36 ybiU 37 yliF 38 ybjL 39 ybjD 40 pflB 41 focA 42 serC 43 ycbQ 44 pgaD 45 csgE 46 csgD 47 yceI 48 yceJ 49 ycgX 50 ycgE 51 ymgD 52 ymgG 53 minC 54 hlyE 55 ycgV 56 yciF 57 osmB 58 ycjN 59 ycjT 60 ynaI 61 sieB 62 rzpR 63 ynaK 64 pinR 65 ynaE 66 ydcL 67 yncC 68 yncI 69 ydcC 70 sra 71 bdm 72 osmC 73 gadC 74 ydeP 75 ydeS 76 ydeK 77 ydeI 78 ynfN 79 cspI 80 ydfE 81 insD 82 rspB 83 mdtI 84 mdtJ 85 hdhA 86 ydiA 87 chbR 88 ynjI 89 ydjG 90 ydjI 91 ydjJ 92 ydjL 93 yeaG 94 yeaJ 95 yoaC 96 yebN 97 cspC 98 yobF 99 uvrC 100 uvrY 101 rcsA 102 yedV 103 yodA 104 yeeN 105 ugd 106 glf 107 wcaM 108 cpsB 109 nudD 110 gmd 111 wcaF 112 wcaE 113 wcaD 114 wcaC 115 wcaA 116 wzc 117 yegJ 118 ogrK 119 gatD 120 gatZ 121 gatY 122 thiD 123 rcnR 124 yehT 125 cdd 126 yeiS 127 ompC 128 rcsD 129 atoS 130 nudI 131 ais 132 arnB 133 yfbN 134 yfcI 135 fabB 136 yfcV 137 yfdP 138 emrY 139 evgA 140 evgS 141 yfeD 142 xapR 143 murP 144 eutN 145 yffB 146 dapE 147 yfgH 148 yfiR 149 yfjH 150 yfjK 151 stpA 152 ygbT 153 ygcI 154 ygcJ 155 ygcK 156 ygcL 157 ygcF 158 yqeI 159 ygeO 160 cmtA 161 yghS 162 pitB 163 ygiL 164 insC-5 165 ttdB 166 tdcD 167 tdcC 168 yraH 169 sfsB 170 gltF 171 yhcA 172 envR 173 acrE 174 acrF 175 yhdX 176 yrdD 177 pioO 178 gspD 179 gspE 180 yhfL 181 frlA 182 yhhH 183 yhhI 184 slp 185 hdeB 186 hdeA 187 hdeD 188 gadE 189 gadA 190 yhjB 191 yhjR 192 bcsF 193 yhjX 194 yiaA 195 xylB 196 xylF 197 yiaN 198 sgbU 199 yiaT 200 yiaU 201 yiaV 202 yiaW 203 rhsA 204 yibA 205 yibJ 206 kbl 207 ade 208 ibpA 209 tnaA 210 mdtL 211 rbsD 212 rbsC 213 rbsK 214 yiiS 215 glpF 216 cytR 217 metH 218 yjbE 219 nrfD 220 alsI 221 basS 222 adiY 223 dcuR 224 dcuS 225 yjdI 226 cadA 227 fxsA 228 yjeJ 229 yjfJ 230 yjfO 231 ytfA 232 chpB 233 fbp 234 yjgM 235 idnK 236 yjhF 237 yjhG 238 yjhH 239 yjhI 240 sgcR 241 nanC 242 fimB 243 fimE 244 fimA 245 fimI 246 fimD 247 yjiW 248 yjjQ 249 bglJ 250 creC 251 creD 7 -> 8, 8 -> 9, 8 -> 10, 9 -> 10, 11 -> 12, 11 -> 13, 12 -> 13, 12 -> 14, 13 -> 14, 19 -> 20, 22 -> 23, 26 -> 27, 26 -> 28, 27 -> 28, 31 -> 32, 40 -> 41, 40 -> 42, 41 -> 42, 45 -> 46, 47 -> 48, 49 -> 50, 51 -> 52, 51 -> 53, 52 -> 53, 53 -> 54, 58 -> 59, 61 -> 62, 62 -> 63, 64 -> 65, 68 -> 69, 70 -> 71, 70 -> 72, 71 -> 72, 74 -> 75, 78 -> 79, 81 -> 82, 89 -> 90, 89 -> 91, 89 -> 92, 90 -> 91, 90 -> 92, 91 -> 92, 93 -> 94, 96 -> 97, 96 -> 98, 97 -> 98, 102 -> 103, 108 -> 109, 108 -> 110, 108 -> 111, 108 -> 112, 109 -> 110, 109 -> 111, 109 -> 112, 109 -> 113, 109 -> 114, 110 -> 111, 110 -> 112, 110 -> 113, 110 -> 114, 110 -> 115, 111 -> 112, 111 -> 113, 111 -> 114, 111 -> 115, 111 -> 116, 112 -> 113, 112 -> 114, 112 -> 115, 112 -> 116, 114 -> 115, 114 -> 116, 115 -> 116, 118 -> 119, 119 -> 120, 119 -> 121, 120 -> 121, 122 -> 123, 125 -> 126, 127 -> 128, 128 -> 129, 130 -> 131, 130 -> 132, 131 -> 132, 138 -> 139, 138 -> 140, 139 -> 140, 141 -> 142, 145 -> 146, 149 -> 150, 152 -> 153, 152 -> 154, 152 -> 155, 152 -> 156, 153 -> 154, 153 -> 155, 153 -> 156, 154 -> 155, 154 -> 156, 161 -> 162, 163 -> 164, 166 -> 167, 170 -> 171, 172 -> 173, 172 -> 174, 173 -> 174, 174 -> 175, 177 -> 178, 177 -> 179, 178 -> 179, 180 -> 181, 182 -> 183, 184 -> 185, 184 -> 186, 184 -> 187, 184 -> 188, 185 -> 186, 185 -> 187, 185 -> 188, 186 -> 187, 186 -> 188, 187 -> 188, 189 -> 190, 191 -> 192, 194 -> 195, 194 -> 196, 195 -> 196, 197 -> 198, 198 -> 199, 198 -> 200, 198 -> 201, 198 -> 202, 199 -> 200, 199 -> 201, 199 -> 202, 201 -> 202, 203 -> 204, 203 -> 205, 204 -> 205, 209 -> 210, 211 -> 212, 211 -> 213, 212 -> 213, 214 -> 215, 221 -> 222, 224 -> 225, 224 -> 226, 225 -> 226, 227 -> 228, 236 -> 237, 236 -> 238, 236 -> 239, 236 -> 240, 237 -> 238, 237 -> 239, 237 -> 240, 238 -> 239, 238 -> 240, 239 -> 240, 241 -> 242, 241 -> 243, 241 -> 244, 241 -> 245, 242 -> 243, 242 -> 244, 242 -> 245, 242 -> 246, 243 -> 244, 243 -> 245, 243 -> 246, 244 -> 245, 244 -> 246, 245 -> 246, 248 -> 249, 250 -> 251