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["Supplemental Table IV. Examples of one-way and two-way ANOVA tables from analysis of variance (ANOVA)"]
[]
["a) One-way analysis of variance (ANOVA) for gene 11986_at"]
[]
["Data Table x1:"]
["Sample","y","strain"]
["Col.2wk.leaf",0.5360529,"Col-0 leaf"]
["Col.5.wk.leaf",0.422233,"Col-0 leaf"]
["Col.11.wk.leaf",0.1505597,"Col-0 leaf"]
["C24.2wk.leaf",0.4956952,"C24 leaf"]
["C24.5.wk.leaf",0.5160151,"C24 leaf"]
["C24.11.wk.leaf",0.6229304,"C24 leaf"]
["Ler.2wk.leaf",0.4956952,"Ler leaf"]
["Ler.5.wk.leaf",0.2016339,"Ler leaf"]
["Ler.11.wk.leaf",0.2986583,"Ler leaf"]
["WS.2wk.leaf",0.790772,"WS-2 leaf"]
["WS.5.wk.leaf",0.704872,"WS-2 leaf"]
["WS.11wk.leaf",0.5459684,"WS-2 leaf"]
["NO.0.2wk.leaf",0.5655972,"NO-0 leaf"]
["NO.0.5wk.leaf",0.3895668,"NO-0 leaf"]
["NO.0.11.wk.leaf",0.4329594,"NO-0 leaf"]
[]
["*** Analysis of Variance Model ***"]
[]
["Short Output:"]
["Call:"]
["   aov(formula = y ~ strain, data = x1)"]
[]
["Terms:"]
[null,"strain ","Residuals"]
["Sum of Squares",0.2363782,0.1803762]
["Deg. of Freedom",4,10]
[]
["Residual standard error: 0.1343042 "]
["Estimated effects are balanced"]
[]
[null,"Df","Sum of Sq","Mean Sq","F Value","Pr(F) "]
["strain",4,0.2363782,0.05909454,3.276183,0.05825959]
["Residuals                ",10,0.1803762,0.01803762]
[]
[]
["b) Two-way analysis of variance (ANOVA) for gene 11986_at"]
[]
["Data Table x2:"]
["Sample","y","strain","Organ"]
["Col.4d.seedling",0.3645947,"col","seedlings"]
["Col.2wk.leaf",0.5395621,"col","leaf"]
["Col.5.wk.leaf",0.4191409,"col","leaf"]
["Col.11.wk.leaf",0.1549262,"col","leaf11"]
["Col.2wk.root",-0.2657447,"col","root"]
["Col.5.wk.root",0.2723074,"col","root"]
["Col.inflorescence",0.5396353,"col","inflorescence"]
["Col.flower",0.1411478,"col","flower"]
["Col.young.siliques",0.2978004,"col","young silique"]
["Col.mature.silique",0.2850237,"col","mature silique"]
["C24.4d.seedling",0.8228968,"C24","seedlings"]
["C24.2wk.leaf",0.4941368,"C24","leaf"]
["C24.5.wk.leaf",0.5150631,"C24","leaf"]
["C24.11.wk.leaf",0.618876,"C24","leaf11"]
["C24.2wk.root",0.08082884,"C24","root"]
["C24.5.wk.root",0.1802204,"C24","root"]
["C24.inflorescence",0.5683562,"C24","inflorescence"]
["C24.flower",0.7357861,"C24","flower"]
["C24.young.siliques",0.6886353,"C24","young silique"]
["C24.mature.silique",0.8416212,"C24","mature silique"]
["Ler.4d.seedling",0.3313058,"ler","seedlings"]
["Ler.2wk.leaf",0.4940836,"ler","leaf"]
["Ler.5.wk.leaf",0.2017881,"ler","leaf"]
["Ler.11.wk.leaf",0.2986864,"ler","leaf11"]
["Ler.2wk.root",0.2727759,"ler","root"]
["Ler.5.wk.root",0.1932111,"ler","root"]
["Ler.inflorescence",0.2136851,"ler","inflorescence"]
["Ler.flower",0.2671641,"ler","flower"]
["Ler.young.siliques",0.7991612,"ler","young silique"]
["Ler.mature.silique",0.9034244,"ler","mature silique"]
["WS.4d.seedling",0.2383519,"WS","seedlings"]
["WS.2wk.leaf",0.7897395,"WS","leaf"]
["WS.5.wk.leaf",0.7073589,"WS","leaf"]
["WS.11wk.leaf",0.5492273,"WS","leaf11"]
["WS.2wk.root",0.4977776,"WS","root"]
["WS.5.wk.root",0.6106845,"WS","root"]
["WS.inflorescence",0.1081698,"WS","inflorescence"]
["WS.flower",0.0673341,"WS","flower"]
["WS.young.siliques",0.6026023,"WS","young silique"]
["WS.mature.silique",0.5709667,"WS","mature silique"]
["NO.0.4d.seedling",0.2009748,"NO","seedlings"]
["NO.0.2wk.leaf",0.5631085,"NO","leaf"]
["NO.0.5wk.leaf",0.3913305,"NO","leaf"]
["NO.0.11.wk.leaf",0.4304101,"NO","leaf11"]
["NO.0.2wk.root",0.6421164,"NO","root"]
["NO.0.5.wk.root",0.4943396,"NO","root"]
["NO.0.inflorescence",0.3953517,"NO","inflorescence"]
["NO.0.flower",0.3206092,"NO","flower"]
["NO.0.young.siliques",0.8140938,"NO","young silique"]
["NO.0.mature.silique",0.642735,"NO","mature silique"]
[]
["*** Analysis of Variance Model ***"]
[]
["Short Output:"]
["Call:"]
["   aov(formula = y ~ strain * Organ, data = x2)"]
[]
["Terms:"]
[null,"strain","Organ","strain:Organ","Residuals "]
["Sum of Squares",0.458295,0.80527,1.467967,0.238483]
["Deg. of Freedom",4,7,28,10]
[]
["Residual standard error: 0.1544288 "]
["Estimated effects may be unbalanced"]
[]
[null,"Df","Sum of Sq","Mean Sq","F Value","Pr(F) "]
["strain",4,0.458295,0.1145738,4.804284,0.02014351]
["Organ",7,0.80527,0.1150386,4.823771,0.01296276]
["strain:Organ",28,1.467967,0.0524274,2.198373,0.09528697]
["Residuals              ",10,0.238483,0.0238483]