{"text_format":"3","workbook":"xls","n_sheets":8,"sheets":["Regions","SummaryStats","Nucleotides","Introns","Exons","Complete models","Consensus analysis","ConsensusFromPool"],"not_rendered":{"external_links":1},"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Regions","index":0,"n_rows":69,"n_cols":45,"rows_kept":69,"flags":["formulas_cached_only"]}
["NUMBER OF TRANSCRIPT MODELS, THEN CDSs, PROPOSED BY THE 25 TRACKS OVER THE 44 REGIONS (first the 31 test regions, then the 13 others)"]
["// start: 2006-01-24_23:41:41"]
["// data parsed, start statistics: 2006-01-24_23:41:52",{"$nulls":31},"Test regions are highlighted yellow."]
["######################################################"]
["## Coding or non coding transcripts, 31 test regions followed by 13 training regions"]
["Program","ENm001","ENm002","ENm003","ENm005","ENm007","ENm008","ENm009","ENm010","ENm011","ENm012","ENm013","ENm014","ENr112","ENr113","ENr121","ENr122","ENr123","ENr131","ENr133","ENr211","ENr212","ENr213","ENr221","ENr233","ENr311","ENr312","ENr313","ENr321","ENr322","ENr331","ENr332","ENm004","ENm006","ENr111","ENr114","ENr132","ENr222","ENr223","ENr231","ENr232","ENr323","ENr324","ENr333","ENr334"]
["Gencode    ",73,133,37,202,220,163,89,56,122,20,53,34,0,5,19,24,10,45,87,4,21,4,24,101,0,7,0,14,8,83,103,113,275,20,4,41,12,54,98,71,15,32,169,48]
["AceView",73,106,32,192,207,189,47,57,122,20,41,28,0,5,15,32,10,36,91,1,21,3,17,110,0,5,0,5,11,79,99,132,275,16,3,40,15,49,94,87,18,26,177,49]
["*KnownGene",22,46,11,52,92,34,49,18,33,12,14,7,0,0,7,17,4,18,12,1,5,1,4,31,0,2,0,1,9,21,31,43,80,2,4,15,8,23,28,27,8,5,39,18]
["UP Dogfish",10,19,6,16,18,0,9,24,12,8,9,6,0,0,3,5,5,6,5,1,2,2,6,17,0,1,0,4,5,10,10,17,41,2,2,5,4,9,12,10,7,4,13,6]
["Ensembl",16,30,9,38,72,48,49,21,30,6,10,7,0,0,5,14,5,14,11,3,4,1,3,34,1,1,0,1,7,20,23,24,71,3,2,15,5,14,23,26,8,5,41,15]
["Exogean",26,40,12,55,99,50,21,13,43,7,18,8,0,0,2,16,5,17,18,0,3,1,8,28,0,0,0,1,3,25,37,41,81,3,2,11,4,17,32,27,9,7,43,17]
["UP ExonHunter ",72,56,19,99,41,28,72,34,34,39,42,32,23,19,23,18,8,16,29,39,18,13,29,22,31,51,23,18,24,31,24,80,64,35,5,17,27,27,25,23,26,23,26,30]
["Fgenesh",20,33,11,50,66,36,74,32,31,8,11,9,4,3,6,12,5,17,15,8,8,3,5,20,5,6,2,3,8,22,26,34,68,8,2,20,6,16,18,18,9,3,35,18]
["UP GeneID",16,18,5,25,26,24,33,19,16,5,6,9,2,3,6,7,2,10,7,5,3,3,4,16,6,4,1,5,8,13,11,24,39,6,2,16,5,13,10,10,7,3,16,7]
["UP GeneMark",43,31,15,36,25,32,64,24,19,17,17,31,8,7,16,13,11,25,17,16,9,10,18,32,11,9,15,13,15,17,16,37,62,11,4,12,12,27,13,13,18,7,19,13]
["UP Jigsaw",10,24,7,29,39,25,47,16,19,2,9,5,1,0,6,11,3,12,8,1,2,1,3,16,0,2,0,1,2,12,13,23,48,3,2,8,3,9,12,11,5,4,16,9]
["Pairagon",18,39,9,52,60,45,52,25,25,5,12,13,0,0,7,10,2,13,15,3,5,2,3,30,1,1,0,3,5,24,30,29,78,9,1,12,3,16,26,20,16,5,46,18]
["UP SGP2",32,28,12,52,20,24,63,46,19,61,18,31,2,2,9,12,6,15,7,19,15,10,13,24,20,37,17,24,30,28,15,35,49,7,2,11,11,16,12,13,14,8,19,22]
["P Twinscan",40,41,18,48,54,36,82,36,27,9,16,26,1,2,10,17,14,22,16,5,8,5,7,40,0,2,0,9,6,23,35,50,76,7,7,14,7,29,21,15,20,8,29,16]
["UP Augustus",15,26,8,35,47,30,65,20,22,5,9,9,0,1,5,9,6,15,8,2,3,1,5,21,0,3,0,3,4,11,11,0,0,0,0,0,0,0,0,0,0,0,0,0]
["UP GeneZilla",29,30,12,46,57,37,68,28,27,17,30,39,11,8,26,9,6,21,13,14,5,7,13,19,11,9,4,8,13,14,25,0,0,0,0,0,0,0,0,0,0,0,0,0]
["UP Saga",20,26,5,30,34,24,27,11,18,8,17,14,9,9,8,14,6,5,7,8,3,6,6,15,3,6,7,3,5,10,14,0,0,0,0,0,0,0,0,0,0,0,0,0]
["*RefSeq",13,26,6,42,59,26,49,17,21,5,7,5,0,0,2,11,1,14,9,1,4,1,2,20,0,1,0,1,4,12,24,22,61,3,1,7,4,9,16,16,7,3,35,10]
["*P CCDS",12,16,6,21,39,15,7,13,9,2,7,3,0,0,2,8,1,7,6,0,3,1,2,12,0,1,0,1,4,6,11,15,32,0,1,5,3,5,13,10,7,2,19,7]
["*MGC",11,35,12,28,60,38,18,12,11,1,6,9,0,0,6,16,1,10,16,0,2,1,2,24,0,0,0,1,2,12,8,24,62,1,0,3,3,28,28,12,9,4,17,11]
["*Ensembl",16,30,9,38,72,48,50,21,30,6,11,7,0,0,5,14,5,14,11,3,4,1,3,34,1,1,0,1,7,20,23,24,71,3,2,15,5,14,23,26,8,5,42,15]
["*AceView",132,206,74,333,286,220,116,82,153,34,83,40,3,8,37,44,20,52,135,8,50,12,34,188,6,14,1,36,24,125,138,240,399,30,4,69,26,62,175,125,43,57,249,76]
["*ECgene",392,410,186,992,560,630,229,132,334,87,191,94,5,14,83,75,49,86,242,20,164,48,62,373,29,45,4,150,68,254,412,591,1217,62,17,165,82,342,491,351,128,191,851,156]
["*U NscanEst",14,25,7,28,28,26,30,19,18,6,11,7,0,0,5,7,3,7,7,2,4,2,3,18,1,0,0,3,3,12,13,19,40,6,1,9,3,10,13,11,7,4,15,11]
["*UP GenScan",26,27,7,35,34,24,55,22,21,12,12,12,4,3,11,10,5,14,15,11,5,6,7,17,9,5,4,9,7,13,12,25,45,13,2,27,9,15,8,11,8,4,16,12]
["*ExonWalk",36,31,26,80,136,116,37,15,57,18,9,10,0,0,2,18,3,24,21,1,4,1,9,56,0,2,0,2,6,68,107,93,194,1,2,14,3,34,64,70,8,16,291,35]
[]
["// done: 2006-01-24_23:41:55"]
["######################################################"]
["// start: 2006-01-24_23:41:55"]
["// data parsed, start statistics: 2006-01-24_23:42:06"]
["######################################################"]
["## Coding transcripts only, 31 test regions followed by 13 training regions"]
["Program","ENm001","ENm002","ENm003","ENm005","ENm007","ENm008","ENm009","ENm010","ENm011","ENm012","ENm013","ENm014","ENr112","ENr113","ENr121","ENr122","ENr123","ENr131","ENr133","ENr211","ENr212","ENr213","ENr221","ENr233","ENr311","ENr312","ENr313","ENr321","ENr322","ENr331","ENr332","ENm004","ENm006","ENr111","ENr114","ENr132","ENr222","ENr223","ENr231","ENr232","ENr323","ENr324","ENr333","ENr334"]
["Gencode    ",24,62,22,69,112,52,57,15,55,4,22,10,0,4,3,19,7,21,25,1,7,3,7,40,0,1,0,1,5,25,50,39,118,4,3,11,4,18,31,20,7,13,67,29]
["AceView",73,106,32,192,207,189,47,57,122,20,41,28,0,5,15,32,10,36,91,1,21,3,17,110,0,5,0,5,11,79,99,132,275,16,3,40,15,49,94,87,18,26,177,49]
["*KnownGene",22,46,11,52,92,34,49,18,33,12,14,7,0,0,7,17,4,18,12,1,5,1,4,31,0,2,0,1,9,21,31,43,80,2,4,15,8,23,28,27,8,5,39,18]
["UP Dogfish",10,19,6,16,18,0,9,24,12,8,9,6,0,0,3,5,5,6,5,1,2,2,6,17,0,1,0,4,5,10,10,17,41,2,2,5,4,9,12,10,7,4,13,6]
["Ensembl",16,30,9,38,72,48,49,21,30,6,10,7,0,0,5,14,5,14,11,3,4,1,3,34,1,1,0,1,7,20,23,24,71,3,2,15,5,14,23,26,8,5,41,15]
["Exogean",26,40,12,55,99,50,21,13,43,7,18,8,0,0,2,16,5,17,18,0,3,1,8,28,0,0,0,1,3,25,37,41,81,3,2,11,4,17,32,27,9,7,43,17]
["UP ExonHunter ",72,56,19,99,41,28,72,34,34,39,42,32,23,19,23,18,8,16,29,39,18,13,29,22,31,51,23,18,24,31,24,80,64,35,5,17,27,27,25,23,26,23,26,30]
["Fgenesh",20,33,11,50,66,36,74,32,31,8,11,9,4,3,6,12,5,17,15,8,8,3,5,20,5,6,2,3,8,22,26,34,68,8,2,20,6,16,18,18,9,3,35,18]
["UP GeneID",16,18,5,25,26,24,33,19,16,5,6,9,2,3,6,7,2,10,7,5,3,3,4,16,6,4,1,5,8,13,11,24,39,6,2,16,5,13,10,10,7,3,16,7]
["UP GeneMark",43,31,15,36,25,32,64,24,19,17,17,31,8,7,16,13,11,25,17,16,9,10,18,32,11,9,15,13,15,17,16,37,62,11,4,12,12,27,13,13,18,7,19,13]
["UP Jigsaw",10,24,7,29,39,25,47,16,19,2,9,5,1,0,6,11,3,12,8,1,2,1,3,16,0,2,0,1,2,12,13,23,48,3,2,8,3,9,12,11,5,4,16,9]
["Pairagon",18,39,9,52,60,45,52,25,25,5,12,13,0,0,7,10,2,13,14,3,5,2,3,30,1,1,0,3,5,24,30,29,78,9,1,12,3,16,26,20,15,5,46,18]
["UP SGP2",32,28,12,52,20,24,63,46,19,61,18,31,2,2,9,12,6,15,7,19,15,10,13,24,20,37,17,24,30,28,15,35,49,7,2,11,11,16,12,13,14,8,19,22]
["P Twinscan",40,41,18,48,54,36,82,36,27,9,16,26,1,2,10,17,14,22,16,5,8,5,7,40,0,2,0,9,6,23,35,50,76,7,7,14,7,29,21,15,20,8,29,16]
["UP Augustus",15,26,8,35,47,30,65,20,22,5,9,9,0,1,5,9,6,15,8,2,3,1,5,21,0,3,0,3,4,11,11,0,0,0,0,0,0,0,0,0,0,0,0,0]
["UP GeneZilla",29,30,12,46,57,37,68,28,27,17,30,39,11,8,26,9,6,21,13,14,5,7,13,19,11,9,4,8,13,14,25,0,0,0,0,0,0,0,0,0,0,0,0,0]
["UP Saga",20,26,5,30,34,24,27,11,18,8,17,14,9,9,8,14,6,5,7,8,3,6,6,15,3,6,7,3,5,10,14,0,0,0,0,0,0,0,0,0,0,0,0,0]
["*RefSeq",13,26,6,42,59,26,49,17,21,5,7,5,0,0,2,11,1,14,8,1,4,1,2,20,0,1,0,1,4,12,24,22,61,3,1,7,4,9,16,16,7,3,35,10]
["*P CCDS",12,16,6,21,39,15,7,13,9,2,7,3,0,0,2,8,1,7,6,0,3,1,2,12,0,1,0,1,4,6,11,15,32,0,1,5,3,5,13,10,7,2,19,7]
["*MGC",11,35,12,28,60,38,18,12,11,1,6,9,0,0,6,16,1,10,16,0,2,1,2,24,0,0,0,1,2,12,8,24,62,1,0,3,3,28,28,12,9,4,17,11]
["*Ensembl",16,30,9,38,72,48,50,21,30,6,11,7,0,0,5,14,5,14,11,3,4,1,3,34,1,1,0,1,7,20,23,24,71,3,2,15,5,14,23,26,8,5,42,15]
["*AceView",132,206,74,333,285,220,116,82,153,34,83,40,3,8,37,43,20,52,131,8,49,12,34,188,6,14,1,34,24,125,138,240,399,30,4,69,26,62,174,125,43,57,249,75]
["*ECgene",392,410,186,992,559,630,229,132,334,87,191,94,4,14,83,75,49,85,238,20,160,48,62,373,29,45,4,148,66,254,412,590,1217,61,17,165,82,342,489,351,110,184,850,156]
["*U NscanEst",14,25,7,27,26,26,30,19,16,4,11,7,0,0,5,6,3,7,7,2,4,2,3,18,1,0,0,3,3,12,13,19,40,6,1,9,3,9,12,11,7,4,15,10]
["*UP GenScan",26,27,7,35,34,24,55,22,21,12,12,12,4,3,11,10,5,14,15,11,5,6,7,17,9,5,4,9,7,13,12,25,45,13,2,27,9,15,8,11,8,4,16,12]
["*ExonWalk",36,31,26,80,136,116,37,15,57,18,9,10,0,0,2,18,3,24,21,1,4,1,9,56,0,2,0,2,6,68,107,93,194,1,2,14,3,34,64,70,8,16,291,35]
[]
["// done: 2006-01-24_23:42:09"]
["######################################################"]

{"sheet":"SummaryStats","index":1,"n_rows":169,"n_cols":19,"rows_kept":169,"flags":["formulas_cached_only"]}
["GLOBAL STATISTICS OF THE 25 TRACKS, IN QUANTITATIVE AND QUALITATIVE MODES, OVER ENTIRE TRANSCRIPTS OR RESTRICTED TO REGIONS ANNOTATED AS CDS; in 31 test regions, then in all 44 ENCODE regions."]
["// start: 2006-01-23_00:18:25",{"$nulls":6},"IN THE 31 TEST REGIONS",{"$nulls":3},"// start: 2006-01-23_00:19:10",{"$nulls":4},"IN ALL 44 ENCODE REGIONS"]
["// data parsed, start statistics: 2006-01-23_00:18:35",{"$nulls":10},"// data parsed, start statistics: 2006-01-23_00:19:21"]
["######################################################",{"$nulls":10},"######################################################"]
["## Global statistics on all methodsmulti, just 31 regions",{"$nulls":10},"## Global statistics on all methodsmulti, all 44 regions"]
["Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS",{"$nulls":3},"Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS"]
["Gencode    ",2752819,11454,30,9693,1691,70,41,{"$nulls":3},"Gencode    ",4184961,17970,30,15257,2629,84,40]
["AceView    ",2875508,11251,29,9597,1630,24,100,{"$nulls":3},"AceView    ",4606620,18477,28,15842,2599,36,100]
["UP Dogfish",333654,1898,22,1679,204,15,100,{"$nulls":3},"UP Dogfish",539376,3194,21,2843,331,20,100]
["Ensembl",988741,4031,23,3548,427,56,100,{"$nulls":3},"Ensembl",1605656,6699,21,5964,667,68,100]
["Exogean",1432519,6734,16,6178,554,2,100,{"$nulls":3},"Exogean",2197094,10396,16,9546,847,3,100]
["UP ExonHunter ",676133,4264,43,3237,807,220,100,{"$nulls":3},"UP ExonHunter ",989887,6376,40,4941,1138,297,100]
["Fgenesh",843444,3800,27,3241,462,97,100,{"$nulls":3},"Fgenesh",1296787,5983,25,5169,688,126,100]
["UP GeneID",423051,2223,26,1905,267,51,100,{"$nulls":3},"UP GeneID",654861,3534,25,3058,406,70,100]
["UP GeneMark",537907,2817,42,2185,551,81,100,{"$nulls":3},"UP GeneMark",800063,4329,38,3449,770,110,100]
["UP Jigsaw",454995,2494,23,2168,259,67,100,{"$nulls":3},"UP Jigsaw",691717,3950,22,3471,397,82,100]
["Pairagon",993711,3979,25,3470,471,38,100,{"$nulls":3},"Pairagon",1603453,6652,23,5864,735,53,100]
["PairagonMrna",992698,3969,25,3462,469,38,100,{"$nulls":3},"PairagonMrna",1602440,6642,23,5856,733,53,100]
["PairagonNovel",532925,2498,22,2208,258,32,99,{"$nulls":3},"PairagonNovel",802622,3996,21,3555,397,44,99]
["UP SGP2",552479,3356,38,2645,552,159,100,{"$nulls":3},"UP SGP2",803213,5009,33,4079,747,183,100]
["P Twinscan",1030500,5598,21,4943,547,108,100,{"$nulls":3},"P Twinscan",1522315,8681,20,7727,820,134,100]
["UP AugustusAbinitio",463136,2301,32,1883,316,102,100,{"$nulls":3},"UP AugustusAbinitio",463136,2301,32,1883,316,102,100]
["UP Augustus",508035,2690,26,2291,312,87,100,{"$nulls":3},"UP Augustus",508035,2690,26,2291,312,87,100]
["UP AugustusDual",491630,2521,29,2108,324,89,100,{"$nulls":3},"UP AugustusDual",491630,2521,29,2108,324,89,100]
["UP GeneZilla",761643,3414,33,2758,477,179,100,{"$nulls":3},"UP GeneZilla",761643,3414,33,2758,477,179,100]
["UP Saga",286906,2115,34,1737,331,47,100,{"$nulls":3},"UP Saga",286906,2115,34,1737,331,47,100]
["*KnownGene",1295146,4981,21,4427,501,53,100,{"$nulls":3},"*KnownGene",2088459,8215,20,7361,785,69,100]
["*P CCDS",309070,1723,24,1508,201,14,100,{"$nulls":3},"*P CCDS",487879,2887,22,2553,315,19,100]
["*RefSeq",924165,3305,22,2922,342,41,100,{"$nulls":3},"*RefSeq",1453675,5454,20,4877,529,48,100]
["*MGC",561847,2443,27,2101,323,19,100,{"$nulls":3},"*MGC",909687,4018,26,3474,509,35,100]
["*Ensembl",993110,4033,23,3548,427,58,100,{"$nulls":3},"*Ensembl",1610906,6704,21,5966,667,71,100]
["*AceView",3443504,12486,36,9792,1792,902,100,{"$nulls":3},"*AceView",5429871,20484,35,16235,2878,1371,100]
["*ECgene",9590234,37080,28,30660,3851,2569,100,{"$nulls":3},"*ECgene",19234819,80825,23,69761,7246,3818,100]
["*P Twinscan",410760,2210,27,1884,265,61,100,{"$nulls":3},"*P Twinscan",619866,3543,25,3073,399,71,100]
["*U NscanEst",519502,2601,23,2292,282,27,98,{"$nulls":3},"*U NscanEst",785404,4110,21,3652,421,37,98]
["*UP GenScan",617464,3496,24,3042,395,59,100,{"$nulls":3},"*UP GenScan",920364,5320,23,4671,578,71,100]
["*ExonWalk",1872629,8952,20,8057,892,3,100,{"$nulls":3},"*ExonWalk",3620200,19048,18,17328,1714,6,100]
["*UP SGP",1523084,2574,30,2161,348,65,100,{"$nulls":3},"*UP SGP",1754976,4070,27,3474,515,81,100]
["*UP GeneId",446233,2436,27,2083,300,53,100,{"$nulls":3},"*UP GeneId",685941,3843,26,3312,453,78,100]
["*UP Augustus",462019,2305,32,1879,321,105,100,{"$nulls":3},"*UP Augustus",709077,3682,30,3055,489,138,100]
[]
["// done: 2006-01-23_00:18:36",{"$nulls":10},"// done: 2006-01-23_00:19:22"]
["######################################################",{"$nulls":10},"######################################################"]
["// start: 2006-01-23_00:18:36",{"$nulls":10},"// start: 2006-01-23_00:19:23"]
["// data parsed, start statistics: 2006-01-23_00:18:47",{"$nulls":10},"// data parsed, start statistics: 2006-01-23_00:19:34"]
["######################################################",{"$nulls":10},"######################################################"]
["## Global statistics on all methodsprojected, just 31 regions",{"$nulls":10},"## Global statistics on all methodsprojected, all 44 regions"]
["Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS",{"$nulls":3},"Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS"]
["Gencode    ",0,5585,0,3618,1691,70,41,{"$nulls":3},"Gencode    ",0,8783,0,5651,2629,84,40]
["AceView    ",0,5273,0,3530,1630,24,100,{"$nulls":3},"AceView    ",0,8408,0,5604,2599,36,100]
["UP Dogfish",0,1898,0,1679,204,15,100,{"$nulls":3},"UP Dogfish",0,3194,0,2843,331,20,100]
["Ensembl",0,2851,0,2429,427,56,100,{"$nulls":3},"Ensembl",0,4505,0,3890,667,68,100]
["Exogean",0,3221,0,2855,554,2,100,{"$nulls":3},"Exogean",0,5013,0,4459,847,3,100]
["UP ExonHunter ",0,4264,0,3237,807,220,100,{"$nulls":3},"UP ExonHunter ",0,6376,0,4941,1138,297,100]
["Fgenesh",0,3086,0,2610,462,97,100,{"$nulls":3},"Fgenesh",0,4783,0,4103,688,126,100]
["UP GeneID",0,2223,0,1905,267,51,100,{"$nulls":3},"UP GeneID",0,3534,0,3058,406,70,100]
["UP GeneMark",0,2817,0,2185,551,81,100,{"$nulls":3},"UP GeneMark",0,4329,0,3449,770,110,100]
["UP Jigsaw",0,2494,0,2168,259,67,100,{"$nulls":3},"UP Jigsaw",0,3950,0,3471,397,82,100]
["Pairagon",0,2768,0,2300,471,38,100,{"$nulls":3},"Pairagon",0,4414,0,3699,735,53,100]
["PairagonMrna",0,2758,0,2292,469,38,100,{"$nulls":3},"PairagonMrna",0,4404,0,3691,733,53,100]
["PairagonNovel",0,2498,0,2208,258,32,99,{"$nulls":3},"PairagonNovel",0,3996,0,3555,397,44,99]
["UP SGP2",0,3356,0,2645,552,159,100,{"$nulls":3},"UP SGP2",0,5009,0,4079,747,183,100]
["P Twinscan",0,2940,0,2501,547,108,100,{"$nulls":3},"P Twinscan",0,4625,0,3989,820,134,100]
["UP AugustusAbinitio",0,2301,0,1883,316,102,100,{"$nulls":3},"UP AugustusAbinitio",0,2301,0,1883,316,102,100]
["UP Augustus",0,2690,0,2291,312,87,100,{"$nulls":3},"UP Augustus",0,2690,0,2291,312,87,100]
["UP AugustusDual",0,2521,0,2108,324,89,100,{"$nulls":3},"UP AugustusDual",0,2521,0,2108,324,89,100]
["UP GeneZilla",0,3414,0,2758,477,179,100,{"$nulls":3},"UP GeneZilla",0,3414,0,2758,477,179,100]
["UP Saga",0,2115,0,1737,331,47,100,{"$nulls":3},"UP Saga",0,2115,0,1737,331,47,100]
["*KnownGene",0,2763,0,2264,501,53,100,{"$nulls":3},"*KnownGene",0,4468,0,3682,785,69,100]
["*P CCDS",0,1470,0,1296,201,14,100,{"$nulls":3},"*P CCDS",0,2461,0,2193,315,19,100]
["*RefSeq",0,2360,0,2082,342,41,100,{"$nulls":3},"*RefSeq",0,3805,0,3407,529,48,100]
["*MGC",0,1752,0,1400,323,19,100,{"$nulls":3},"*MGC",0,2768,0,2222,509,35,100]
["*Ensembl",0,2853,0,2429,427,58,100,{"$nulls":3},"*Ensembl",0,4509,0,3891,667,71,100]
["*AceView",0,6796,0,3812,1792,902,100,{"$nulls":3},"*AceView",0,10767,0,6017,2878,1371,100]
["*ECgene",0,8404,0,3942,3851,2569,100,{"$nulls":3},"*ECgene",0,13121,0,6275,7246,3818,100]
["*P Twinscan",0,2210,0,1884,265,61,100,{"$nulls":3},"*P Twinscan",0,3543,0,3073,399,71,100]
["*U NscanEst",0,2601,0,2292,282,27,98,{"$nulls":3},"*U NscanEst",0,4110,0,3652,421,37,98]
["*UP GenScan",0,3496,0,3042,395,59,100,{"$nulls":3},"*UP GenScan",0,5320,0,4671,578,71,100]
["*ExonWalk",0,2478,0,2219,892,3,100,{"$nulls":3},"*ExonWalk",0,4038,0,3666,1714,6,100]
["*UP SGP",0,2574,0,2161,348,65,100,{"$nulls":3},"*UP SGP",0,4070,0,3474,515,81,100]
["*UP GeneId",0,2436,0,2083,300,53,100,{"$nulls":3},"*UP GeneId",0,3843,0,3312,453,78,100]
["*UP Augustus",0,2305,0,1879,321,105,100,{"$nulls":3},"*UP Augustus",0,3682,0,3055,489,138,100]
[]
["// done: 2006-01-23_00:18:47",{"$nulls":10},"// done: 2006-01-23_00:19:35"]
["######################################################",{"$nulls":10},"######################################################"]
["// start: 2006-01-23_00:18:47",{"$nulls":10},"// start: 2006-01-23_00:19:35"]
["// data parsed, start statistics: 2006-01-23_00:18:58",{"$nulls":10},"// data parsed, start statistics: 2006-01-23_00:19:46"]
["######################################################",{"$nulls":10},"######################################################"]
["## Global statistics on all methodsmulti, just 31 regions, restricted to coding part",{"$nulls":10},"## Global statistics on all methodsmulti, all 44 regions, restricted to coding part"]
["Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS",{"$nulls":3},"Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS"]
["Gencode    ",939643,5891,23,5168,649,74,100,{"$nulls":3},"Gencode    ",1446054,9266,22,8179,993,94,100]
["AceView    ",1422452,9332,33,7678,1460,194,100,{"$nulls":3},"AceView    ",2294247,15522,32,12887,2354,281,100]
["UP Dogfish",334311,1898,22,1679,204,15,100,{"$nulls":3},"UP Dogfish",540429,3194,21,2843,331,20,100]
["Ensembl",652693,3743,24,3260,418,65,100,{"$nulls":3},"Ensembl",1041481,6226,22,5491,650,85,100]
["Exogean",856778,5383,20,4827,538,18,100,{"$nulls":3},"Exogean",1314519,8556,20,7706,824,26,100]
["UP ExonHunter ",676133,4264,43,3237,807,220,100,{"$nulls":3},"UP ExonHunter ",989887,6376,40,4941,1138,297,100]
["Fgenesh",662351,3622,28,3063,458,101,100,{"$nulls":3},"Fgenesh",987306,5692,26,4878,680,134,100]
["UP GeneID",423051,2223,26,1905,267,51,100,{"$nulls":3},"UP GeneID",654861,3534,25,3058,406,70,100]
["UP GeneMark",537907,2817,42,2185,551,81,100,{"$nulls":3},"UP GeneMark",800063,4329,38,3449,770,110,100]
["UP Jigsaw",455973,2494,23,2168,259,67,100,{"$nulls":3},"UP Jigsaw",693147,3949,22,3470,397,82,100]
["Pairagon",627868,3653,26,3145,437,71,100,{"$nulls":3},"Pairagon",997501,6118,24,5332,681,105,100]
["PairagonMrna",626936,3645,26,3139,435,71,100,{"$nulls":3},"PairagonMrna",996569,6110,24,5326,679,105,100]
["PairagonNovel",426254,2279,23,1993,234,52,100,{"$nulls":3},"PairagonNovel",644531,3680,22,3244,362,74,100]
["UP SGP2",552479,3356,38,2645,552,159,100,{"$nulls":3},"UP SGP2",803213,5009,33,4079,747,183,100]
["P Twinscan",1030500,5598,21,4943,547,108,100,{"$nulls":3},"P Twinscan",1522315,8681,20,7727,820,134,100]
["UP AugustusAbinitio",464390,2301,32,1883,316,102,100,{"$nulls":3},"UP AugustusAbinitio",464390,2301,32,1883,316,102,100]
["UP Augustus",509232,2690,26,2291,312,87,100,{"$nulls":3},"UP Augustus",509232,2690,26,2291,312,87,100]
["UP AugustusDual",492869,2521,29,2108,324,89,100,{"$nulls":3},"UP AugustusDual",492869,2521,29,2108,324,89,100]
["UP GeneZilla",763611,3414,33,2758,477,179,100,{"$nulls":3},"UP GeneZilla",763611,3414,33,2758,477,179,100]
["UP Saga",288040,2115,34,1737,331,47,100,{"$nulls":3},"UP Saga",288040,2115,34,1737,331,47,100]
["*KnownGene",755991,4483,23,3929,477,77,100,{"$nulls":3},"*KnownGene",1204312,7448,21,6594,746,108,100]
["*P CCDS",309070,1723,24,1508,201,14,100,{"$nulls":3},"*P CCDS",487879,2887,22,2553,315,19,100]
["*RefSeq",560689,3040,23,2658,325,57,100,{"$nulls":3},"*RefSeq",862342,5034,22,4458,507,69,100]
["*MGC",354404,2251,29,1909,310,32,100,{"$nulls":3},"*MGC",575463,3709,28,3165,491,53,100]
["*Ensembl",654680,3746,24,3261,418,67,100,{"$nulls":3},"*Ensembl",1044283,6232,22,5494,650,88,100]
["*AceView",1715623,10810,40,8125,1627,1058,100,{"$nulls":3},"*AceView",2749969,17952,38,13714,2636,1602,100]
["*ECgene",4453745,30938,32,24533,3551,2854,100,{"$nulls":3},"*ECgene",9690862,68133,26,57114,6764,4255,100]
["*P Twinscan",410760,2210,27,1884,265,61,100,{"$nulls":3},"*P Twinscan",619866,3543,25,3073,399,71,100]
["*U NscanEst",412013,2366,23,2065,252,49,100,{"$nulls":3},"*U NscanEst",625994,3774,22,3327,380,67,100]
["*UP GenScan",617464,3496,24,3042,395,59,100,{"$nulls":3},"*UP GenScan",920364,5320,23,4671,578,71,100]
["*ExonWalk",1232705,8100,22,7205,873,22,100,{"$nulls":3},"*ExonWalk",2316080,16723,20,15003,1688,32,100]
["*UP SGP",1523084,2574,30,2161,348,65,100,{"$nulls":3},"*UP SGP",1754976,4070,27,3474,515,81,100]
["*UP GeneId",446233,2436,27,2083,300,53,100,{"$nulls":3},"*UP GeneId",685941,3843,26,3312,453,78,100]
["*UP Augustus",463279,2305,32,1879,321,105,100,{"$nulls":3},"*UP Augustus",710934,3682,30,3055,489,138,100]
[]
["// done: 2006-01-23_00:18:58",{"$nulls":10},"// done: 2006-01-23_00:19:47"]
["######################################################",{"$nulls":10},"######################################################"]
["// start: 2006-01-23_00:18:59",{"$nulls":10},"// start: 2006-01-23_00:19:47"]
["// data parsed, start statistics: 2006-01-23_00:19:09",{"$nulls":10},"// data parsed, start statistics: 2006-01-23_00:19:59"]
["######################################################",{"$nulls":10},"######################################################"]
["## Global statistics on all methodsprojected, just 31 regions, restricted to coding part",{"$nulls":10},"## Global statistics on all methodsprojected, all 44 regions, restricted to coding part"]
["Program",null,"Exons",null,"Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS",{"$nulls":3},"Program","Nucleotides","Exons","Terminal exons","Introns","mRNA with intron","Single exon mRNA","% all mRNA with CDS"]
["Gencode    ",null,2768,null,2369,649,74,100,{"$nulls":3},"Gencode    ",0,4389,0,3774,993,94,100]
["AceView    ",null,4155,null,2857,1460,194,100,{"$nulls":3},"AceView    ",0,6656,0,4592,2354,281,100]
["UP Dogfish",null,1898,null,1679,204,15,100,{"$nulls":3},"UP Dogfish",0,3194,0,2843,331,20,100]
["Ensembl",null,2593,null,2240,418,65,100,{"$nulls":3},"Ensembl",0,4120,0,3608,650,85,100]
["Exogean",null,2631,null,2336,538,18,100,{"$nulls":3},"Exogean",0,4170,0,3727,824,26,100]
["UP ExonHunter ",null,4264,null,3237,807,220,100,{"$nulls":3},"UP ExonHunter ",0,6376,0,4941,1138,297,100]
["Fgenesh",null,3002,null,2517,458,101,100,{"$nulls":3},"Fgenesh",0,4649,0,3950,680,134,100]
["UP GeneID",null,2223,null,1905,267,51,100,{"$nulls":3},"UP GeneID",0,3534,0,3058,406,70,100]
["UP GeneMark",null,2817,null,2185,551,81,100,{"$nulls":3},"UP GeneMark",0,4329,0,3449,770,110,100]
["UP Jigsaw",null,2494,null,2168,259,67,100,{"$nulls":3},"UP Jigsaw",0,3949,0,3470,397,82,100]
["Pairagon",null,2390,null,2056,437,71,100,{"$nulls":3},"Pairagon",0,3826,0,3336,681,105,100]
["PairagonMrna",null,2382,null,2050,435,71,100,{"$nulls":3},"PairagonMrna",0,3818,0,3330,679,105,100]
["PairagonNovel",null,2279,null,1993,234,52,100,{"$nulls":3},"PairagonNovel",0,3680,0,3244,362,74,100]
["UP SGP2",null,3356,null,2645,552,159,100,{"$nulls":3},"UP SGP2",0,5009,0,4079,747,183,100]
["P Twinscan",null,2940,null,2501,547,108,100,{"$nulls":3},"P Twinscan",0,4625,0,3989,820,134,100]
["UP AugustusAbinitio",null,2301,null,1883,316,102,100,{"$nulls":3},"UP AugustusAbinitio",0,2301,0,1883,316,102,100]
["UP Augustus",null,2690,null,2291,312,87,100,{"$nulls":3},"UP Augustus",0,2690,0,2291,312,87,100]
["UP AugustusDual",null,2521,null,2108,324,89,100,{"$nulls":3},"UP AugustusDual",0,2521,0,2108,324,89,100]
["UP GeneZilla",null,3414,null,2758,477,179,100,{"$nulls":3},"UP GeneZilla",0,3414,0,2758,477,179,100]
["UP Saga",null,2115,null,1737,331,47,100,{"$nulls":3},"UP Saga",0,2115,0,1737,331,47,100]
["*KnownGene",null,2454,null,2075,477,77,100,{"$nulls":3},"*KnownGene",0,3976,0,3397,746,108,100]
["*P CCDS",null,1470,null,1296,201,14,100,{"$nulls":3},"*P CCDS",0,2461,0,2193,315,19,100]
["*RefSeq",null,2192,null,1909,325,57,100,{"$nulls":3},"*RefSeq",0,3558,0,3150,507,69,100]
["*MGC",null,1484,null,1254,310,32,100,{"$nulls":3},"*MGC",0,2358,0,2009,491,53,100]
["*Ensembl",null,2596,null,2241,418,67,100,{"$nulls":3},"*Ensembl",0,4125,0,3610,650,88,100]
["*AceView",null,5522,null,3106,1627,1058,100,{"$nulls":3},"*AceView",0,8776,0,4989,2636,1602,100]
["*ECgene",null,6938,null,3030,3551,2854,100,{"$nulls":3},"*ECgene",0,10862,0,4890,6764,4255,100]
["*P Twinscan",null,2210,null,1884,265,61,100,{"$nulls":3},"*P Twinscan",0,3543,0,3073,399,71,100]
["*U NscanEst",null,2366,null,2065,252,49,100,{"$nulls":3},"*U NscanEst",0,3774,0,3327,380,67,100]
["*UP GenScan",null,3496,null,3042,395,59,100,{"$nulls":3},"*UP GenScan",0,5320,0,4671,578,71,100]
["*ExonWalk",null,2334,null,2006,873,22,100,{"$nulls":3},"*ExonWalk",0,3804,0,3323,1688,32,100]
["*UP SGP",null,2574,null,2161,348,65,100,{"$nulls":3},"*UP SGP",0,4070,0,3474,515,81,100]
["*UP GeneId",null,2436,null,2083,300,53,100,{"$nulls":3},"*UP GeneId",0,3843,0,3312,453,78,100]
["*UP Augustus",null,2305,null,1879,321,105,100,{"$nulls":3},"*UP Augustus",0,3682,0,3055,489,138,100]
[]
["// done: 2006-01-23_00:19:10",{"$nulls":10},"// done: 2006-01-23_00:20:00"]
["######################################################",{"$nulls":10},"######################################################"]

{"sheet":"Nucleotides","index":2,"n_rows":67,"n_cols":14,"rows_kept":67,"flags":["formulas_cached_only"]}
["COMPARISONS OF NUCLEOTIDES PROPOSED BY THE 25 TRACKS, IN QUALITATIVE (PROJECTED) MODE, OVER ENTIRE TRANSCRIPTS OR RESTRICTED TO REGIONS ANNOTATED AS CDS"]
["// start: 2006-01-24_23:41:07"]
["// data parsed, start statistics: 2006-01-24_23:41:17"]
["######################################################"]
["## BasePairs projected, just 31 regions"]
["Program","True positive","False positive in transcript with intron","False positive in intronless transcript","False negative","Program","Sensitivity","Sensitivity eval","Program","Raw specificity","Specificity eval","Specificity, ignoring single exon transcripts","Number bp","Verif"]
["Gencode    ",1200107,0,0,0,"Gencode    ",100,0,"Gencode    ",100,0,100,1200107,0]
["*AceView",1106530,154950,557482,93577,"*AceView",92.2,0,"*AceView",60.83,0,87.72,1818962,0]
["*ECgene",1101851,187671,1253619,98256,"*ECgene",91.81,93,"*ECgene",43.33,38.68,85.45,2543141,0]
["AceView",1034167,111658,26916,165940,"AceView",86.17,88.08,"AceView",88.18,79.47,90.26,1172741,0]
["*KnownGene",691809,20485,12032,508298,"*KnownGene",57.65,0,"*KnownGene",95.51,0,97.12,724326,0]
["*Ensembl",659598,22234,7691,540509,"*Ensembl",54.96,62.43,"*Ensembl",95.66,95.27,96.74,689523,0]
["Ensembl",655229,22234,7691,544878,"Ensembl",54.6,61.61,"Ensembl",95.63,95.26,96.72,685154,0]
["Exogean",648280,28525,769,551827,"Exogean",54.02,60.58,"Exogean",95.68,94.73,95.79,677574,0]
["*RefSeq",631926,19158,1262,568181,"*RefSeq",52.66,0,"*RefSeq",96.87,0,97.06,652346,0]
["Pairagon",600749,59521,7369,599358,"Pairagon",50.06,56.31,"Pairagon",89.98,89.36,90.99,667639,0]
["*ExonWalk",542326,4369,0,657781,"*ExonWalk",45.19,0,"*ExonWalk",99.2,0,99.2,546695,0]
["Fgenesh",525351,94351,18856,674756,"Fgenesh",43.78,48.87,"Fgenesh",82.27,81.16,84.77,638558,0]
["UP Augustus",435056,52463,20516,765051,"UP Augustus",36.25,40.46,"UP Augustus",85.64,84.5,89.24,508035,0]
["UP Jigsaw",429772,18097,7126,770335,"UP Jigsaw",35.81,40.02,"UP Jigsaw",94.46,93.35,95.96,454995,0]
["*U NscanEst",427703,84692,7107,772404,"*U NscanEst",35.64,0,"*U NscanEst",82.33,0,83.47,519502,0]
["UP ExonHunter ",418155,221868,36110,781952,"UP ExonHunter ",34.84,38.93,"UP ExonHunter ",61.85,61.44,65.33,676133,0]
["UP GeneZilla",401788,275426,84429,798319,"UP GeneZilla",33.48,37.42,"UP GeneZilla",52.75,52.08,59.33,761643,0]
["*UP GenScan",399840,207391,10233,800267,"*UP GenScan",33.32,36.76,"*UP GenScan",64.76,63.2,65.85,617464,0]
["P Twinscan",389553,101066,15285,810554,"P Twinscan",32.46,36.16,"P Twinscan",77,76.04,79.4,505904,0]
["UP SGP2",379125,148249,25105,820982,"UP SGP2",31.59,35.4,"UP SGP2",68.62,68.04,71.89,552479,0]
["*MGC",375929,5380,475,824178,"*MGC",31.32,0,"*MGC",98.47,0,98.59,381784,0]
["UP GeneMark",355297,165053,17557,844810,"UP GeneMark",29.61,33.09,"UP GeneMark",66.05,65.28,68.28,537907,0]
["UP GeneID",341514,69379,12158,858593,"UP GeneID",28.46,31.8,"UP GeneID",80.73,79.75,83.12,423051,0]
["UP Dogfish",294387,36993,2274,905720,"UP Dogfish",24.53,27.49,"UP Dogfish",88.23,87.44,88.84,333654,0]
["*P CCDS",253700,0,424,946407,"*P CCDS",21.14,23.86,"*P CCDS",99.83,99.68,100,254124,0]
["UP Saga",234649,45738,6519,965458,"UP Saga",19.55,22,"UP Saga",81.79,81.54,83.69,286906,0]
["// done: 2006-01-24_23:41:24"]
["######################################################"]
["// start: 2006-01-24_23:41:24"]
["// data parsed, start statistics: 2006-01-24_23:41:34"]
["######################################################"]
["## BasePairs projected, just 31 regions, restricted to coding part"]
["Program","True positive","False positive in transcript with intron","False positive in intronless transcript","False negative","Program","Sensitivity","Sensitivity eval","Program","Raw specificity","Specificity eval","Specificity, ignoring single exon transcripts","Number bp","Verif"]
["Gencode    ",443771,0,0,0,"Gencode    ",100,0,"Gencode    ",100,0,100,443771,0]
["*AceView",432634,103768,208401,11137,"*AceView",97.49,0,"*AceView",58.09,0,80.65,744803,0]
["*ECgene",428470,99275,406163,15301,"*ECgene",96.55,96.36,"*ECgene",45.88,47.3,81.19,933908,0]
["UP Jigsaw",420677,26342,8954,23094,"UP Jigsaw",94.8,94.56,"UP Jigsaw",92.26,92.19,94.11,455973,0]
["UP Augustus",418772,68404,22056,24999,"UP Augustus",94.37,94.42,"UP Augustus",82.24,82.43,85.96,509232,0]
["Fgenesh",404668,101708,20664,39103,"Fgenesh",91.19,91.09,"Fgenesh",76.78,76.89,79.91,527040,0]
["AceView",403962,80923,30031,39809,"AceView",91.03,90.94,"AceView",78.45,79.14,83.31,514916,0]
["*Ensembl",402702,26307,8787,41069,"*Ensembl",90.75,91.39,"*Ensembl",91.98,91.92,93.87,437796,0]
["Ensembl",400715,26307,8787,43056,"Ensembl",90.3,90.18,"Ensembl",91.95,92.02,93.84,435809,0]
["UP ExonHunter ",399345,239096,37692,44426,"UP ExonHunter ",89.99,90.46,"UP ExonHunter ",59.06,59.67,62.55,676133,0]
["Pairagon",389238,21188,10248,54533,"Pairagon",87.71,87.77,"Pairagon",92.53,92.78,94.84,420674,0]
["UP GeneZilla",388858,289886,84867,54913,"UP GeneZilla",87.63,87.56,"UP GeneZilla",50.92,50.93,57.29,763611,0]
["*KnownGene",382991,10454,9241,60780,"*KnownGene",86.3,0,"*KnownGene",95.11,0,97.34,402686,0]
["*RefSeq",382990,3889,3825,60781,"*RefSeq",86.3,0,"*RefSeq",98.03,0,98.99,390704,0]
["*U NscanEst",374752,31176,6085,69019,"*U NscanEst",84.45,0,"*U NscanEst",90.96,0,92.32,412013,0]
["Exogean",374453,20106,2549,69318,"Exogean",84.38,84.18,"Exogean",94.3,94.33,94.9,397108,0]
["P Twinscan",372914,116897,16093,70857,"P Twinscan",84.03,84.25,"P Twinscan",73.71,74.13,76.13,505904,0]
["*UP GenScan",371546,235410,10508,72225,"*UP GenScan",83.72,84.17,"*UP GenScan",60.17,60.6,61.21,617464,0]
["UP SGP2",365967,160837,25675,77804,"UP SGP2",82.47,82.84,"UP SGP2",66.24,66.8,69.47,552479,0]
["*ExonWalk",346749,10113,0,97022,"*ExonWalk",78.14,0,"*ExonWalk",97.17,0,97.17,356862,0]
["UP GeneMark",337459,182219,18229,106312,"UP GeneMark",76.04,78.43,"UP GeneMark",62.74,37.97,64.94,537907,0]
["UP GeneID",332515,78378,12158,111256,"UP GeneID",74.93,75.03,"UP GeneID",78.6,78.83,80.92,423051,0]
["UP Dogfish",285509,46482,2320,158262,"UP Dogfish",64.34,64.81,"UP Dogfish",85.4,88.24,86,334311,0]
["*P CCDS",252910,408,806,190861,"*P CCDS",56.99,56.87,"*P CCDS",99.52,99.52,99.84,254124,0]
["UP Saga",232415,48857,6768,211356,"UP Saga",52.37,52.54,"UP Saga",80.69,81.39,82.63,288040,0]
["*MGC",227748,4290,1500,216023,"*MGC",51.32,0,"*MGC",97.52,0,98.15,233538,0]
["// done: 2006-01-24_23:41:41"]
["######################################################"]

{"sheet":"Introns","index":3,"n_rows":208,"n_cols":26,"rows_kept":208,"flags":["formulas_cached_only"]}
["COMPARISONS OF INTRONS PROPOSED BY THE 25 TRACKS, IN QUANTITATIVE AND QUALITATIVE MODES, OVER ENTIRE TRANSCRIPTS OR RESTRICTED TO REGIONS ANNOTATED AS CDS"]
["REFERENCE HAVANA/GENCODE",{"$nulls":13},"REFERENCE ACEVIEW, PUBLIC VERSION AUG05"]
["// start: 2006-01-24_23:38:31",{"$nulls":13},"// start: 2006-03-03_20:42:17"]
["// data parsed, start statistics: 2006-01-24_23:38:41",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_20:42:25"]
["######################################################",{"$nulls":13},"######################################################"]
["## Introns multi, just 31 regions",{"$nulls":13},"## Introns multi, 31 regions"]
["Program","True positive, identical to Gencode","False positive, present in Gencode but over-used","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns",null,null,"Program","True positive, identical to *AceView","False positive, present in *AceView but over-used","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns"]
["Gencode    ",9693,0,0,0,"Gencode    ",100,"Gencode    ",100,0,0,9693,null,null,"*AceView",9792,0,0,0,"*AceView",100,"*AceView",100,0,0,9792]
["*ECgene",8718,20117,1825,975,"*ECgene",89.94,"*ECgene",28.43,10.06,71.57,30660,null,null,"*ECgene",8793,20440,1427,999,"*ECgene",89.8,"*ECgene",28.68,10.2,71.32,30660]
["*AceView",8236,958,598,1457,"*AceView",84.97,"*AceView",84.11,15.03,15.89,9792,null,null,"AceView",8658,789,150,1134,"AceView",88.42,"AceView",90.22,11.58,9.78,9597]
["AceView",8099,1064,434,1594,"AceView",83.56,"AceView",84.39,16.44,15.61,9597,null,null,"Gencode",8236,1066,391,1556,"Gencode",84.11,"Gencode",84.97,15.89,15.03,9693]
["*ExonWalk",5226,2717,114,4467,"*ExonWalk",53.92,"*ExonWalk",64.86,46.08,35.14,8057,null,null,"*ExonWalk",5267,2713,77,4525,"*ExonWalk",53.79,"*ExonWalk",65.37,46.21,34.63,8057]
["Exogean",5146,403,629,4547,"Exogean",53.09,"Exogean",83.3,46.91,16.7,6178,null,null,"Exogean",5031,500,647,4761,"Exogean",51.38,"Exogean",81.43,48.62,18.57,6178]
["*KnownGene",4136,201,90,5557,"*KnownGene",42.67,"*KnownGene",93.43,57.33,6.57,4427,null,null,"*KnownGene",4129,219,79,5663,"*KnownGene",42.17,"*KnownGene",93.27,57.83,6.73,4427]
["Ensembl",3106,58,384,6587,"Ensembl",32.04,"Ensembl",87.54,67.96,12.46,3548,null,null,"Pairagon",3108,132,230,6684,"Pairagon",31.74,"Pairagon",89.57,68.26,10.43,3470]
["*Ensembl",3106,58,384,6587,"*Ensembl",32.04,"*Ensembl",87.54,67.96,12.46,3548,null,null,"Ensembl",3108,155,285,6684,"Ensembl",31.74,"Ensembl",87.6,68.26,12.4,3548]
["Pairagon",3104,151,215,6589,"Pairagon",32.02,"Pairagon",89.45,67.98,10.55,3470,null,null,"*Ensembl",3108,155,285,6684,"*Ensembl",31.74,"*Ensembl",87.6,68.26,12.4,3548]
["*RefSeq",2845,26,51,6848,"*RefSeq",29.35,"*RefSeq",97.36,70.65,2.64,2922,null,null,"*RefSeq",2875,7,40,6917,"*RefSeq",29.36,"*RefSeq",98.39,70.64,1.61,2922]
["P Twinscan",2803,648,1492,6890,"P Twinscan",28.92,"P Twinscan",56.71,71.08,43.29,4943,null,null,"P Twinscan",2804,671,1468,6988,"P Twinscan",28.64,"P Twinscan",56.73,71.36,43.27,4943]
["Fgenesh",2508,16,717,7185,"Fgenesh",25.87,"Fgenesh",77.38,74.13,22.62,3241,null,null,"Fgenesh",2510,5,726,7282,"Fgenesh",25.63,"Fgenesh",77.45,74.37,22.55,3241]
["UP Jigsaw",2006,0,162,7687,"UP Jigsaw",20.7,"UP Jigsaw",92.53,79.3,7.47,2168,null,null,"UP Jigsaw",1990,0,178,7802,"UP Jigsaw",20.32,"UP Jigsaw",91.79,79.68,8.21,2168]
["*MGC",1887,177,37,7806,"*MGC",19.47,"*MGC",89.81,80.53,10.19,2101,null,null,"*MGC",1907,168,26,7885,"*MGC",19.48,"*MGC",90.77,80.52,9.23,2101]
["*U NscanEst",1859,0,433,7834,"*U NscanEst",19.18,"*U NscanEst",81.11,80.82,18.89,2292,null,null,"*U NscanEst",1846,0,446,7946,"*U NscanEst",18.85,"*U NscanEst",80.54,81.15,19.46,2292]
["UP Augustus",1832,0,459,7861,"UP Augustus",18.9,"UP Augustus",79.97,81.1,20.03,2291,null,null,"UP Augustus",1825,0,466,7967,"UP Augustus",18.64,"UP Augustus",79.66,81.36,20.34,2291]
["UP ExonHunter ",1609,0,1628,8084,"UP ExonHunter ",16.6,"UP ExonHunter ",49.71,83.4,50.29,3237,null,null,"UP ExonHunter",1592,0,1645,8200,"UP ExonHunter",16.26,"UP ExonHunter",49.18,83.74,50.82,3237]
["*P CCDS",1504,2,2,8189,"*P CCDS",15.52,"*P CCDS",99.73,84.48,0.27,1508,null,null,"*P CCDS",1505,0,3,8287,"*P CCDS",15.37,"*P CCDS",99.8,84.63,0.2,1508]
["UP SGP2",1445,0,1200,8248,"UP SGP2",14.91,"UP SGP2",54.63,85.09,45.37,2645,null,null,"UP GeneZilla",1451,0,1307,8341,"UP GeneZilla",14.82,"UP GeneZilla",52.61,85.18,47.39,2758]
["UP GeneZilla",1444,0,1314,8249,"UP GeneZilla",14.9,"UP GeneZilla",52.36,85.1,47.64,2758,null,null,"UP SGP2",1436,0,1209,8356,"UP SGP2",14.67,"UP SGP2",54.29,85.33,45.71,2645]
["*UP GenScan",1428,0,1614,8265,"*UP GenScan",14.73,"*UP GenScan",46.94,85.27,53.06,3042,null,null,"*UP GenScan",1434,0,1608,8358,"*UP GenScan",14.64,"*UP GenScan",47.14,85.36,52.86,3042]
["UP Dogfish",1309,0,370,8384,"UP Dogfish",13.5,"UP Dogfish",77.96,86.5,22.04,1679,null,null,"UP Dogfish",1305,0,374,8487,"UP Dogfish",13.33,"UP Dogfish",77.72,86.67,22.28,1679]
["UP GeneID",1163,0,742,8530,"UP GeneID",12,"UP GeneID",61.05,88,38.95,1905,null,null,"UP GeneID",1168,0,737,8624,"UP GeneID",11.93,"UP GeneID",61.31,88.07,38.69,1905]
["UP GeneMark",1089,0,1096,8604,"UP GeneMark",11.23,"UP GeneMark",49.84,88.77,50.16,2185,null,null,"UP GeneMark",1099,0,1086,8693,"UP GeneMark",11.22,"UP GeneMark",50.3,88.78,49.7,2185]
["UP Saga",1000,0,737,8693,"UP Saga",10.32,"UP Saga",57.57,89.68,42.43,1737,null,null,"UP Saga",998,0,739,8794,"UP Saga",10.19,"UP Saga",57.46,89.81,42.54,1737]
[]
["Note: at this position in the standard output comes a histogram, which is obviously calculated over unique exons, not on multiple. It was manually removed from here, to avoid misleads."]
["// done: 2006-01-24_23:38:42",{"$nulls":13},"// done: 2006-03-03_20:42:26"]
["######################################################",{"$nulls":13},"######################################################"]
["// start: 2006-01-24_23:38:42",{"$nulls":13},"// start: 2006-03-03_20:43:14"]
["// data parsed, start statistics: 2006-01-24_23:38:52",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_20:43:24"]
["######################################################",{"$nulls":13},"######################################################"]
["## Introns projected, just 31 regions",{"$nulls":13},"## Introns multi, 31 regions, restricted to coding part"]
["Program","True positive, identical to Gencode","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns","Verif2",null,null,"Program","True positive, identical to *AceView","False positive, present in *AceView but over-used","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns"]
["Gencode    ",3618,0,0,"Gencode    ",100,"Gencode    ",100,0,0,3618,0,null,null,"*AceView",8125,0,0,0,"*AceView",100,"*AceView",100,0,0,8125]
["*AceView",3266,546,352,"*AceView",90.27,"*AceView",85.68,9.73,14.32,3812,0,null,null,"*ECgene",7065,16395,1073,1060,"*ECgene",86.95,"*ECgene",28.8,13.05,71.2,24533]
["AceView",3190,340,428,"AceView",88.17,"AceView",90.37,11.83,9.63,3530,0,null,null,"AceView",6878,622,178,1247,"AceView",84.65,"AceView",89.58,15.35,10.42,7678]
["*ECgene",3130,812,488,"*ECgene",86.51,"*ECgene",79.4,13.49,20.6,3942,0,null,null,"Gencode",4725,312,131,3400,"Gencode",58.15,"Gencode",91.43,41.85,8.57,5168]
["Exogean",2498,357,1120,"Exogean",69.04,"Exogean",87.5,30.96,12.5,2855,0,null,null,"*ExonWalk",4627,2496,82,3498,"*ExonWalk",56.95,"*ExonWalk",64.22,43.05,35.78,7205]
["*ExonWalk",2184,35,1434,"*ExonWalk",60.36,"*ExonWalk",98.42,39.64,1.58,2219,0,null,null,"Exogean",4135,333,359,3990,"Exogean",50.89,"Exogean",85.66,49.11,14.34,4827]
["*KnownGene",2179,85,1439,"*KnownGene",60.23,"*KnownGene",96.25,39.77,3.75,2264,0,null,null,"*KnownGene",3661,189,79,4464,"*KnownGene",45.06,"*KnownGene",93.18,54.94,6.82,3929]
["Ensembl",2172,257,1446,"Ensembl",60.03,"Ensembl",89.42,39.97,10.58,2429,0,null,null,"Pairagon",2857,141,147,5268,"Pairagon",35.16,"Pairagon",90.84,64.84,9.16,3145]
["*Ensembl",2172,257,1446,"*Ensembl",60.03,"*Ensembl",89.42,39.97,10.58,2429,0,null,null,"Ensembl",2812,165,283,5313,"Ensembl",34.61,"Ensembl",86.26,65.39,13.74,3260]
["Pairagon",2085,215,1533,"Pairagon",57.63,"Pairagon",90.65,42.37,9.35,2300,0,null,null,"*Ensembl",2812,165,284,5313,"*Ensembl",34.61,"*Ensembl",86.23,65.39,13.77,3261]
["*RefSeq",2033,49,1585,"*RefSeq",56.19,"*RefSeq",97.65,43.81,2.35,2082,0,null,null,"P Twinscan",2758,700,1485,5367,"P Twinscan",33.94,"P Twinscan",55.8,66.06,44.2,4943]
["UP Jigsaw",2006,162,1612,"UP Jigsaw",55.44,"UP Jigsaw",92.53,44.56,7.47,2168,0,null,null,"*RefSeq",2620,10,28,5505,"*RefSeq",32.25,"*RefSeq",98.57,67.75,1.43,2658]
["Fgenesh",1940,670,1678,"Fgenesh",53.62,"Fgenesh",74.33,46.38,25.67,2610,0,null,null,"Fgenesh",2381,8,674,5744,"Fgenesh",29.3,"Fgenesh",77.73,70.7,22.27,3063]
["*U NscanEst",1859,433,1759,"*U NscanEst",51.38,"*U NscanEst",81.11,48.62,18.89,2292,0,null,null,"UP Jigsaw",1981,0,187,6144,"UP Jigsaw",24.38,"UP Jigsaw",91.37,75.62,8.63,2168]
["UP Augustus",1832,459,1786,"UP Augustus",50.64,"UP Augustus",79.97,49.36,20.03,2291,0,null,null,"UP Augustus",1813,0,478,6312,"UP Augustus",22.31,"UP Augustus",79.14,77.69,20.86,2291]
["UP ExonHunter ",1609,1628,2009,"UP ExonHunter ",44.47,"UP ExonHunter ",49.71,55.53,50.29,3237,0,null,null,"*U NscanEst",1781,0,284,6344,"*U NscanEst",21.92,"*U NscanEst",86.25,78.08,13.75,2065]
["P Twinscan",1597,904,2021,"P Twinscan",44.14,"P Twinscan",63.85,55.86,36.15,2501,0,null,null,"*MGC",1721,166,22,6404,"*MGC",21.18,"*MGC",90.15,78.82,9.85,1909]
["UP SGP2",1445,1200,2173,"UP SGP2",39.94,"UP SGP2",54.63,60.06,45.37,2645,0,null,null,"UP ExonHunter",1585,0,1652,6540,"UP ExonHunter",19.51,"UP ExonHunter",48.97,80.49,51.03,3237]
["UP GeneZilla",1444,1314,2174,"UP GeneZilla",39.91,"UP GeneZilla",52.36,60.09,47.64,2758,0,null,null,"*P CCDS",1501,1,6,6624,"*P CCDS",18.47,"*P CCDS",99.54,81.53,0.46,1508]
["*UP GenScan",1428,1614,2190,"*UP GenScan",39.47,"*UP GenScan",46.94,60.53,53.06,3042,0,null,null,"UP GeneZilla",1443,0,1315,6682,"UP GeneZilla",17.76,"UP GeneZilla",52.32,82.24,47.68,2758]
["*MGC",1367,33,2251,"*MGC",37.78,"*MGC",97.64,62.22,2.36,1400,0,null,null,"UP SGP2",1428,0,1217,6697,"UP SGP2",17.58,"UP SGP2",53.99,82.42,46.01,2645]
["UP Dogfish",1309,370,2309,"UP Dogfish",36.18,"UP Dogfish",77.96,63.82,22.04,1679,0,null,null,"*UP GenScan",1424,0,1618,6701,"*UP GenScan",17.53,"*UP GenScan",46.81,82.47,53.19,3042]
["*P CCDS",1294,2,2324,"*P CCDS",35.77,"*P CCDS",99.85,64.23,0.15,1296,0,null,null,"UP Dogfish",1304,0,375,6821,"UP Dogfish",16.05,"UP Dogfish",77.67,83.95,22.33,1679]
["UP GeneID",1163,742,2455,"UP GeneID",32.14,"UP GeneID",61.05,67.86,38.95,1905,0,null,null,"UP GeneID",1163,0,742,6962,"UP GeneID",14.31,"UP GeneID",61.05,85.69,38.95,1905]
["UP GeneMark",1089,1096,2529,"UP GeneMark",30.1,"UP GeneMark",49.84,69.9,50.16,2185,0,null,null,"UP GeneMark",1092,0,1093,7033,"UP GeneMark",13.44,"UP GeneMark",49.98,86.56,50.02,2185]
["UP Saga",1000,737,2618,"UP Saga",27.64,"UP Saga",57.57,72.36,42.43,1737,0,null,null,"UP Saga",996,0,741,7129,"UP Saga",12.26,"UP Saga",57.34,87.74,42.66,1737]
[]
[]
["Support histogram: how many features are supported by n methods",{"$nulls":13},"Support histogram: how many features are supported by n methods"]
["189 are specific of Gencode",{"$nulls":13},"237 are specific of *AceView"]
["Number of supporting methods","Present in AceView","Absent in AceView",{"$nulls":11},"Number of supporting methods","Present in AceView","Absent in AceView"]
[0,0,0,{"$nulls":11},0,0,0]
[1,47,8450,{"$nulls":11},1,63,7883]
[2,110,1077,{"$nulls":11},2,33,954]
[3,115,224,{"$nulls":11},3,15,221]
[4,26,90,{"$nulls":11},4,3,89]
[5,7,55,{"$nulls":11},5,7,56]
[6,3,28,{"$nulls":11},6,2,35]
[7,5,19,{"$nulls":11},7,3,27]
[8,6,18,{"$nulls":11},8,2,17]
[9,3,13,{"$nulls":11},9,1,17]
[10,1,13,{"$nulls":11},10,3,13]
[11,0,5,{"$nulls":11},11,0,6]
[12,1,3,{"$nulls":11},12,2,7]
[13,1,5,{"$nulls":11},13,0,15]
[14,4,7,{"$nulls":11},14,0,11]
[15,0,9,{"$nulls":11},15,4,9]
[16,2,3,{"$nulls":11},16,0,2]
[17,1,2,{"$nulls":11},17,2,1]
[18,4,2,{"$nulls":11},18,1,0]
[19,2,2,{"$nulls":11},"// done: 2006-03-03_20:43:24"]
[20,2,0,{"$nulls":11},"######################################################"]
["// done: 2006-01-24_23:38:53",{"$nulls":13},"// start: 2006-03-03_20:43:40"]
["######################################################",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_20:43:48"]
["// start: 2006-01-24_23:38:53",{"$nulls":13},"######################################################"]
["// data parsed, start statistics: 2006-01-24_23:39:03",{"$nulls":13},"## Introns projected, 31 regions"]
["######################################################",{"$nulls":13},"Program","True positive, identical to *AceView","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns","Verif2"]
["## Introns multi, just 31 regions, restricted to coding part",{"$nulls":13},"*AceView",3812,0,0,"*AceView",100,"*AceView",100,0,0,3812,0]
["Program","True positive, identical to Gencode","False positive, present in Gencode but over-used","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns",null,null,"AceView",3416,114,396,"AceView",89.61,"AceView",96.77,10.39,3.23,3530,0]
["Gencode    ",5168,0,0,0,"Gencode    ",100,"Gencode    ",100,0,0,5168,null,null,"Gencode",3266,352,546,"Gencode",85.68,"Gencode",90.27,14.32,9.73,3618,0]
["*ECgene",4806,17613,2114,362,"*ECgene",93,"*ECgene",19.59,7,80.41,24533,null,null,"*ECgene",3263,679,549,"*ECgene",85.6,"*ECgene",82.78,14.4,17.22,3942,0]
["*AceView",4725,2370,1030,443,"*AceView",91.43,"*AceView",58.15,8.57,41.85,8125,null,null,"Exogean",2489,366,1323,"Exogean",65.29,"Exogean",87.18,34.71,12.82,2855,0]
["AceView",4673,2206,799,495,"AceView",90.42,"AceView",60.86,9.58,39.14,7678,null,null,"*KnownGene",2194,70,1618,"*KnownGene",57.56,"*KnownGene",96.91,42.44,3.09,2264,0]
["Exogean",3847,562,418,1321,"Exogean",74.44,"Exogean",79.7,25.56,20.3,4827,null,null,"*ExonWalk",2186,33,1626,"*ExonWalk",57.35,"*ExonWalk",98.51,42.65,1.49,2219,0]
["*ExonWalk",3660,3306,239,1508,"*ExonWalk",70.82,"*ExonWalk",50.8,29.18,49.2,7205,null,null,"Ensembl",2185,244,1627,"Ensembl",57.32,"Ensembl",89.95,42.68,10.05,2429,0]
["*KnownGene",3419,382,128,1749,"*KnownGene",66.16,"*KnownGene",87.02,33.84,12.98,3929,null,null,"*Ensembl",2185,244,1627,"*Ensembl",57.32,"*Ensembl",89.95,42.68,10.05,2429,0]
["*Ensembl",2710,136,415,2458,"*Ensembl",52.44,"*Ensembl",83.1,47.56,16.9,3261,null,null,"Pairagon",2072,228,1740,"Pairagon",54.35,"Pairagon",90.09,45.65,9.91,2300,0]
["Ensembl",2709,136,415,2459,"Ensembl",52.42,"Ensembl",83.1,47.58,16.9,3260,null,null,"*RefSeq",2043,39,1769,"*RefSeq",53.59,"*RefSeq",98.13,46.41,1.87,2082,0]
["Pairagon",2672,326,147,2496,"Pairagon",51.7,"Pairagon",84.96,48.3,15.04,3145,null,null,"UP Jigsaw",1990,178,1822,"UP Jigsaw",52.2,"UP Jigsaw",91.79,47.8,8.21,2168,0]
["*RefSeq",2518,89,51,2650,"*RefSeq",48.72,"*RefSeq",94.73,51.28,5.27,2658,null,null,"Fgenesh",1931,679,1881,"Fgenesh",50.66,"Fgenesh",73.98,49.34,26.02,2610,0]
["P Twinscan",2486,933,1524,2682,"P Twinscan",48.1,"P Twinscan",50.29,51.9,49.71,4943,null,null,"*U NscanEst",1846,446,1966,"*U NscanEst",48.43,"*U NscanEst",80.54,51.57,19.46,2292,0]
["Fgenesh",2295,79,689,2873,"Fgenesh",44.41,"Fgenesh",74.93,55.59,25.07,3063,null,null,"UP Augustus",1825,466,1987,"UP Augustus",47.88,"UP Augustus",79.66,52.12,20.34,2291,0]
["UP Jigsaw",1986,0,182,3182,"UP Jigsaw",38.43,"UP Jigsaw",91.61,61.57,8.39,2168,null,null,"P Twinscan",1598,903,2214,"P Twinscan",41.92,"P Twinscan",63.89,58.08,36.11,2501,0]
["UP Augustus",1802,0,489,3366,"UP Augustus",34.87,"UP Augustus",78.66,65.13,21.34,2291,null,null,"UP ExonHunter",1592,1645,2220,"UP ExonHunter",41.76,"UP ExonHunter",49.18,58.24,50.82,3237,0]
["*U NscanEst",1776,0,289,3392,"*U NscanEst",34.37,"*U NscanEst",86,65.63,14,2065,null,null,"UP GeneZilla",1451,1307,2361,"UP GeneZilla",38.06,"UP GeneZilla",52.61,61.94,47.39,2758,0]
["UP ExonHunter ",1588,0,1649,3580,"UP ExonHunter ",30.73,"UP ExonHunter ",49.06,69.27,50.94,3237,null,null,"UP SGP2",1436,1209,2376,"UP SGP2",37.67,"UP SGP2",54.29,62.33,45.71,2645,0]
["*MGC",1541,320,48,3627,"*MGC",29.82,"*MGC",80.72,70.18,19.28,1909,null,null,"*UP GenScan",1434,1608,2378,"*UP GenScan",37.62,"*UP GenScan",47.14,62.38,52.86,3042,0]
["*P CCDS",1490,8,10,3678,"*P CCDS",28.83,"*P CCDS",98.81,71.17,1.19,1508,null,null,"*MGC",1380,20,2432,"*MGC",36.2,"*MGC",98.57,63.8,1.43,1400,0]
["UP SGP2",1434,0,1211,3734,"UP SGP2",27.75,"UP SGP2",54.22,72.25,45.78,2645,null,null,"UP Dogfish",1305,374,2507,"UP Dogfish",34.23,"UP Dogfish",77.72,65.77,22.28,1679,0]
["UP GeneZilla",1420,0,1338,3748,"UP GeneZilla",27.48,"UP GeneZilla",51.49,72.52,48.51,2758,null,null,"*P CCDS",1293,3,2519,"*P CCDS",33.92,"*P CCDS",99.77,66.08,0.23,1296,0]
["*UP GenScan",1393,0,1649,3775,"*UP GenScan",26.95,"*UP GenScan",45.79,73.05,54.21,3042,null,null,"UP GeneID",1168,737,2644,"UP GeneID",30.64,"UP GeneID",61.31,69.36,38.69,1905,0]
["UP Dogfish",1294,0,385,3874,"UP Dogfish",25.04,"UP Dogfish",77.07,74.96,22.93,1679,null,null,"UP GeneMark",1099,1086,2713,"UP GeneMark",28.83,"UP GeneMark",50.3,71.17,49.7,2185,0]
["UP GeneID",1151,0,754,4017,"UP GeneID",22.27,"UP GeneID",60.42,77.73,39.58,1905,null,null,"UP Saga",998,739,2814,"UP Saga",26.18,"UP Saga",57.46,73.82,42.54,1737,0]
["UP GeneMark",1073,0,1112,4095,"UP GeneMark",20.76,"UP GeneMark",49.11,79.24,50.89,2185]
["UP Saga",996,0,741,4172,"UP Saga",19.27,"UP Saga",57.34,80.73,42.66,1737]
[{"$nulls":14},"Support histogram: how many features are supported by n methods"]
["Note: at this position in the standard output comes a histogram, which is obviously calculated over unique exons, not on multiple. It was manually removed from here, to avoid misleads.",{"$nulls":13},"172 are specific of *AceView"]
["// done: 2006-01-24_23:39:03",{"$nulls":13},"Number of supporting methods","Present in AceView","Absent in AceView"]
["######################################################",{"$nulls":13},0,0,0]
["// start: 2006-01-24_23:39:03",{"$nulls":13},1,47,8467]
["// data parsed, start statistics: 2006-01-24_23:39:14",{"$nulls":13},2,18,1058]
["######################################################",{"$nulls":13},3,19,226]
["## Introns projected, just 31 regions, restricted to coding part",{"$nulls":13},4,4,94]
["Program","True positive, identical to Gencode","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns","Verif2",null,null,5,7,55]
["Gencode    ",2369,0,0,"Gencode    ",100,"Gencode    ",100,0,0,2369,0,null,null,6,4,34]
["*AceView",2255,851,114,"*AceView",95.19,"*AceView",72.6,4.81,27.4,3106,0,null,null,7,4,24]
["AceView",2233,624,136,"AceView",94.26,"AceView",78.16,5.74,21.84,2857,0,null,null,8,2,20]
["*ECgene",2196,834,173,"*ECgene",92.7,"*ECgene",72.48,7.3,27.52,3030,0,null,null,9,1,18]
["Exogean",2054,282,315,"Exogean",86.7,"Exogean",87.93,13.3,12.07,2336,0,null,null,10,0,13]
["UP Jigsaw",1986,182,383,"UP Jigsaw",83.83,"UP Jigsaw",91.61,16.17,8.39,2168,0,null,null,11,0,6]
["*Ensembl",1958,283,411,"*Ensembl",82.65,"*Ensembl",87.37,17.35,12.63,2241,0,null,null,12,2,7]
["Ensembl",1957,283,412,"Ensembl",82.61,"Ensembl",87.37,17.39,12.63,2240,0,null,null,13,1,11]
["*KnownGene",1954,121,415,"*KnownGene",82.48,"*KnownGene",94.17,17.52,5.83,2075,0,null,null,14,0,12]
["*ExonWalk",1933,73,436,"*ExonWalk",81.6,"*ExonWalk",96.36,18.4,3.64,2006,0,null,null,15,1,9]
["Pairagon",1912,144,457,"Pairagon",80.71,"Pairagon",93,19.29,7,2056,0,null,null,16,1,2]
["*RefSeq",1859,50,510,"*RefSeq",78.47,"*RefSeq",97.38,21.53,2.62,1909,0,null,null,17,2,1]
["Fgenesh",1856,661,513,"Fgenesh",78.35,"Fgenesh",73.74,21.65,26.26,2517,0,null,null,18,1,0]
["UP Augustus",1802,489,567,"UP Augustus",76.07,"UP Augustus",78.66,23.93,21.34,2291,0,null,null,"// done: 2006-03-03_20:43:49"]
["*U NscanEst",1776,289,593,"*U NscanEst",74.97,"*U NscanEst",86,25.03,14,2065,0,null,null,"######################################################"]
["UP ExonHunter ",1588,1649,781,"UP ExonHunter ",67.03,"UP ExonHunter ",49.06,32.97,50.94,3237,0,null,null,"// start: 2006-03-03_20:43:56"]
["P Twinscan",1579,922,790,"P Twinscan",66.65,"P Twinscan",63.13,33.35,36.87,2501,0,null,null,"// data parsed, start statistics: 2006-03-03_20:44:05"]
["UP SGP2",1434,1211,935,"UP SGP2",60.53,"UP SGP2",54.22,39.47,45.78,2645,0,null,null,"######################################################"]
["UP GeneZilla",1420,1338,949,"UP GeneZilla",59.94,"UP GeneZilla",51.49,40.06,48.51,2758,0,null,null,"## Introns projected, 31 regions, restricted to coding part"]
["*UP GenScan",1393,1649,976,"*UP GenScan",58.8,"*UP GenScan",45.79,41.2,54.21,3042,0,null,null,"Program","True positive, identical to *AceView","False positive, new","False negative","Program","Sensitivity","Program","Specificity","% missed introns","% wrong introns","All introns","Verif2"]
["UP Dogfish",1294,385,1075,"UP Dogfish",54.62,"UP Dogfish",77.07,45.38,22.93,1679,0,null,null,"*AceView",3106,0,0,"*AceView",100,"*AceView",100,0,0,3106,0]
["*P CCDS",1286,10,1083,"*P CCDS",54.28,"*P CCDS",99.23,45.72,0.77,1296,0,null,null,"AceView",2716,141,390,"AceView",87.44,"AceView",95.06,12.56,4.94,2857,0]
["*MGC",1213,41,1156,"*MGC",51.2,"*MGC",96.73,48.8,3.27,1254,0,null,null,"*ECgene",2515,515,591,"*ECgene",80.97,"*ECgene",83,19.03,17,3030,0]
["UP GeneID",1151,754,1218,"UP GeneID",48.59,"UP GeneID",60.42,51.41,39.58,1905,0,null,null,"Gencode",2255,114,851,"Gencode",72.6,"Gencode",95.19,27.4,4.81,2369,0]
["UP GeneMark",1073,1112,1296,"UP GeneMark",45.29,"UP GeneMark",49.11,54.71,50.89,2185,0,null,null,"Exogean",2105,231,1001,"Exogean",67.77,"Exogean",90.11,32.23,9.89,2336,0]
["UP Saga",996,741,1373,"UP Saga",42.04,"UP Saga",57.34,57.96,42.66,1737,0,null,null,"*KnownGene",2003,72,1103,"*KnownGene",64.49,"*KnownGene",96.53,35.51,3.47,2075,0]
[{"$nulls":14},"Ensembl",2003,237,1103,"Ensembl",64.49,"Ensembl",89.42,35.51,10.58,2240,0]
[{"$nulls":14},"*Ensembl",2003,238,1103,"*Ensembl",64.49,"*Ensembl",89.38,35.51,10.62,2241,0]
["Support histogram: how many features are supported by n methods",{"$nulls":13},"UP Jigsaw",1981,187,1125,"UP Jigsaw",63.78,"UP Jigsaw",91.37,36.22,8.63,2168,0]
["31 are specific of Gencode",{"$nulls":13},"*ExonWalk",1974,32,1132,"*ExonWalk",63.55,"*ExonWalk",98.4,36.45,1.6,2006,0]
["Number of supporting methods","Present in AceView","Absent in AceView",{"$nulls":11},"Pairagon",1911,145,1195,"Pairagon",61.53,"Pairagon",92.95,38.47,7.05,2056,0]
[0,0,0,{"$nulls":11},"*RefSeq",1881,28,1225,"*RefSeq",60.56,"*RefSeq",98.53,39.44,1.47,1909,0]
[1,63,8089,{"$nulls":11},"Fgenesh",1870,647,1236,"Fgenesh",60.21,"Fgenesh",74.29,39.79,25.71,2517,0]
[2,212,1014,{"$nulls":11},"UP Augustus",1813,478,1293,"UP Augustus",58.37,"UP Augustus",79.14,41.63,20.86,2291,0]
[3,186,226,{"$nulls":11},"*U NscanEst",1781,284,1325,"*U NscanEst",57.34,"*U NscanEst",86.25,42.66,13.75,2065,0]
[4,54,94,{"$nulls":11},"P Twinscan",1589,912,1517,"P Twinscan",51.16,"P Twinscan",63.53,48.84,36.47,2501,0]
[5,27,58,{"$nulls":11},"UP ExonHunter",1585,1652,1521,"UP ExonHunter",51.03,"UP ExonHunter",48.97,48.97,51.03,3237,0]
[6,14,31,{"$nulls":11},"UP GeneZilla",1443,1315,1663,"UP GeneZilla",46.46,"UP GeneZilla",52.32,53.54,47.68,2758,0]
[7,12,21,{"$nulls":11},"UP SGP2",1428,1217,1678,"UP SGP2",45.98,"UP SGP2",53.99,54.02,46.01,2645,0]
[8,9,18,{"$nulls":11},"*UP GenScan",1424,1618,1682,"*UP GenScan",45.85,"*UP GenScan",46.81,54.15,53.19,3042,0]
[9,10,14,{"$nulls":11},"UP Dogfish",1304,375,1802,"UP Dogfish",41.98,"UP Dogfish",77.67,58.02,22.33,1679,0]
[10,13,13,{"$nulls":11},"*P CCDS",1290,6,1816,"*P CCDS",41.53,"*P CCDS",99.54,58.47,0.46,1296,0]
[11,1,5,{"$nulls":11},"*MGC",1238,16,1868,"*MGC",39.86,"*MGC",98.72,60.14,1.28,1254,0]
[12,3,3,{"$nulls":11},"UP GeneID",1163,742,1943,"UP GeneID",37.44,"UP GeneID",61.05,62.56,38.95,1905,0]
[13,3,8,{"$nulls":11},"UP GeneMark",1092,1093,2014,"UP GeneMark",35.16,"UP GeneMark",49.98,64.84,50.02,2185,0]
[14,4,7,{"$nulls":11},"UP Saga",996,741,2110,"UP Saga",32.07,"UP Saga",57.34,67.93,42.66,1737,0]
[15,0,8]
[16,3,3]
[17,1,1,{"$nulls":11},"Support histogram: how many features are supported by n methods"]
[18,4,2,{"$nulls":11},"237 are specific of *AceView"]
[19,3,2,{"$nulls":11},"Number of supporting methods","Present in AceView","Absent in AceView"]
[20,2,0,{"$nulls":11},0,0,0]
["// done: 2006-01-24_23:39:15",{"$nulls":13},1,63,7883]
["######################################################",{"$nulls":13},2,33,954]
[{"$nulls":14},3,15,221]
[{"$nulls":14},4,3,89]
[{"$nulls":14},5,7,56]
[{"$nulls":14},6,2,35]
[{"$nulls":14},7,3,27]
[{"$nulls":14},8,2,17]
[{"$nulls":14},9,1,17]
[{"$nulls":14},10,3,13]
[{"$nulls":14},11,0,6]
[{"$nulls":14},12,2,7]
[{"$nulls":14},13,0,15]
[{"$nulls":14},14,0,11]
[{"$nulls":14},15,4,9]
[{"$nulls":14},16,0,2]
[{"$nulls":14},17,2,1]
[{"$nulls":14},18,1,0]
[{"$nulls":14},"// done: 2006-03-03_20:44:05"]
[{"$nulls":14},"######################################################"]

{"sheet":"Exons","index":4,"n_rows":191,"n_cols":17,"rows_kept":191,"flags":["formulas_cached_only"]}
["COMPARISONS OF EXONS PROPOSED BY THE 25 TRACKS, IN QUANTITATIVE AND QUALITATIVE MODES, OVER ENTIRE TRANSCRIPTS OR RESTRICTED TO REGIONS ANNOTATED AS CDS"]
["// start: 2006-01-24_23:37:48"]
["// data parsed, start statistics: 2006-01-24_23:37:58"]
["######################################################"]
["## Exons multi, just 31 regions"]
["Program","True positive, identical to Gencode","False positive, present in Gencode but over-used","False positive, new in multi-exon transcript","False positive, new in single exon transcript","False negative","Program","Sensitivity","Program","Raw specificity","Specificity, ignoring single exon transcripts","% missed exons","% wrong exons","All exons"]
["Gencode    ",11454,0,0,0,0,"Gencode    ",100,"Gencode    ",100,100,0,0,11454]
["*ECgene",8341,19486,6712,2541,3113,"*ECgene",72.82,"*ECgene",22.49,24.15,27.18,77.51,37080]
["*AceView",8327,922,2372,865,3127,"*AceView",72.7,"*AceView",66.69,71.65,27.3,33.31,12486]
["AceView",8059,1079,2091,22,3395,"AceView",70.36,"AceView",71.63,71.77,29.64,28.37,11251]
["Exogean",5154,461,1117,2,6300,"Exogean",45,"Exogean",76.54,76.56,55,23.46,6734]
["*ExonWalk",5081,2888,983,0,6373,"*ExonWalk",44.36,"*ExonWalk",56.76,56.76,55.64,43.24,8952]
["*KnownGene",4068,240,649,24,7386,"*KnownGene",35.52,"*KnownGene",81.67,82.07,64.48,18.33,4981]
["Pairagon",3042,182,731,24,8412,"Pairagon",26.56,"Pairagon",76.45,76.92,73.44,23.55,3979]
["*Ensembl",3011,76,905,41,8443,"*Ensembl",26.29,"*Ensembl",74.66,75.43,73.71,25.34,4033]
["Ensembl",3010,76,905,40,8444,"Ensembl",26.28,"Ensembl",74.67,75.42,73.72,25.33,4031]
["P Twinscan",2778,688,2041,91,8676,"P Twinscan",24.25,"P Twinscan",49.62,50.44,75.75,50.38,5598]
["*RefSeq",2763,59,469,14,8691,"*RefSeq",24.12,"*RefSeq",83.6,83.96,75.88,16.4,3305]
["Fgenesh",2355,42,1333,70,9099,"Fgenesh",20.56,"Fgenesh",61.97,63.14,79.44,38.03,3800]
["UP Jigsaw",1821,0,606,67,9633,"UP Jigsaw",15.9,"UP Jigsaw",73.02,75.03,84.1,26.98,2494]
["*U NscanEst",1778,0,796,27,9676,"*U NscanEst",15.52,"*U NscanEst",68.36,69.08,84.48,31.64,2601]
["*MGC",1737,143,545,18,9717,"*MGC",15.17,"*MGC",71.1,71.63,84.83,28.9,2443]
["UP Augustus",1698,0,905,87,9756,"UP Augustus",14.82,"UP Augustus",63.12,65.23,85.18,36.88,2690]
["UP ExonHunter ",1588,0,2473,203,9866,"UP ExonHunter ",13.86,"UP ExonHunter ",37.24,39.1,86.14,62.76,4264]
["UP GeneZilla",1502,0,1733,179,9952,"UP GeneZilla",13.11,"UP GeneZilla",44,46.43,86.89,56,3414]
["*UP GenScan",1493,0,1959,44,9961,"*UP GenScan",13.03,"*UP GenScan",42.71,43.25,86.97,57.29,3496]
["UP SGP2",1439,0,1775,142,10015,"UP SGP2",12.56,"UP SGP2",42.88,44.77,87.44,57.12,3356]
["*P CCDS",1338,12,360,13,10116,"*P CCDS",11.68,"*P CCDS",77.66,78.25,88.32,22.34,1723]
["UP Dogfish",1335,0,548,15,10119,"UP Dogfish",11.66,"UP Dogfish",70.34,70.9,88.34,29.66,1898]
["UP GeneID",1245,0,930,48,10209,"UP GeneID",10.87,"UP GeneID",56.01,57.24,89.13,43.99,2223]
["UP GeneMark",1152,0,1595,70,10302,"UP GeneMark",10.06,"UP GeneMark",40.89,41.94,89.94,59.11,2817]
["UP Saga",977,0,1091,47,10477,"UP Saga",8.53,"UP Saga",46.19,47.24,91.47,53.81,2115]
["Note: at this position in the standard output comes a histogram, which is obviously calculated over unique exons, not on multiple. It was manually removed from here, to avoid misleads."]
["// done: 2006-01-24_23:37:59"]
["######################################################"]
["// start: 2006-01-24_23:37:59"]
["// data parsed, start statistics: 2006-01-24_23:38:09"]
["######################################################"]
["## Exons projected, just 31 regions"]
["Program","True positive, identical to Gencode","False positive, new in multi-exon transcript","False positive, new in single exon transcript","False negative","Program","Sensitivity","Sensitivity eval","Program","Raw specificity","Specificity eval","Specificity, ignoring single exon transcripts","% missed exons","% wrong exons","All exons","Verif2"]
["Gencode    ",5586,0,0,0,"Gencode    ",100,0,"Gencode    ",100,0,100,0,0,5586,0]
["*AceView",3692,2239,865,1894,"*AceView",66.09,0,"*AceView",54.32,0,62.24,33.91,45.68,6796,1]
["AceView",3490,1761,22,2096,"AceView",62.48,64.16,"AceView",66.19,61.18,66.46,37.52,33.81,5273,0]
["*ECgene",3164,2704,2541,2422,"*ECgene",56.64,58.17,"*ECgene",37.63,34.83,53.92,43.36,62.37,8409,0]
["Exogean",2484,735,2,3102,"Exogean",44.47,48.87,"Exogean",77.12,76.29,77.17,55.53,22.88,3221,0]
["*KnownGene",2196,544,23,3390,"*KnownGene",39.31,0,"*KnownGene",79.48,0,80.15,60.69,20.52,2763,0]
["*ExonWalk",2118,360,0,3468,"*ExonWalk",37.92,0,"*ExonWalk",85.47,0,85.47,62.08,14.53,2478,0]
["*Ensembl",2091,721,41,3495,"*Ensembl",37.43,41.71,"*Ensembl",73.29,72.65,74.36,62.57,26.71,2853,0]
["Ensembl",2090,721,40,3496,"Ensembl",37.41,41.61,"Ensembl",73.31,73.41,74.35,62.59,26.69,2851,0]
["Pairagon",2076,668,24,3510,"Pairagon",37.16,41.23,"Pairagon",75,74.93,75.66,62.84,25,2768,0]
["*RefSeq",1962,384,14,3624,"*RefSeq",35.12,0,"*RefSeq",83.14,0,83.63,64.88,16.86,2360,0]
["UP Jigsaw",1821,606,67,3765,"UP Jigsaw",32.6,36.1,"UP Jigsaw",73.02,64.56,75.03,67.4,26.98,2494,0]
["Fgenesh",1813,1203,70,3773,"Fgenesh",32.46,35.84,"Fgenesh",58.75,58.41,60.11,67.54,41.25,3086,0]
["*U NscanEst",1778,796,27,3808,"*U NscanEst",31.83,0,"*U NscanEst",68.36,0,69.08,68.17,31.64,2601,0]
["UP Augustus",1698,905,87,3888,"UP Augustus",30.4,33.6,"UP Augustus",63.12,54.8,65.23,69.6,36.88,2690,0]
["UP ExonHunter ",1588,2473,203,3998,"UP ExonHunter ",28.43,30.93,"UP ExonHunter ",37.24,29.46,39.1,71.57,62.76,4264,0]
["P Twinscan",1567,1282,91,4019,"P Twinscan",28.05,30.48,"P Twinscan",53.3,45.3,55,71.95,46.7,2940,0]
["UP GeneZilla",1502,1733,179,4084,"UP GeneZilla",26.89,29.6,"UP GeneZilla",44,36.58,46.43,73.11,56,3414,0]
["*UP GenScan",1493,1959,44,4093,"*UP GenScan",26.73,29.4,"*UP GenScan",42.71,42.31,43.25,73.27,57.29,3496,0]
["UP SGP2",1439,1775,142,4147,"UP SGP2",25.76,28.01,"UP SGP2",42.88,29.77,44.77,74.24,57.12,3356,0]
["UP Dogfish",1335,548,15,4251,"UP Dogfish",23.9,26.36,"UP Dogfish",70.34,63.97,70.9,76.1,29.66,1898,0]
["*MGC",1286,449,17,4300,"*MGC",23.02,0,"*MGC",73.4,0,74.12,76.98,26.6,1752,0]
["UP GeneID",1245,930,48,4341,"UP GeneID",22.29,24.41,"UP GeneID",56.01,43.65,57.24,77.71,43.99,2223,0]
["UP GeneMark",1152,1595,70,4434,"UP GeneMark",20.62,22.74,"UP GeneMark",40.89,40.61,41.94,79.38,59.11,2817,0]
["*P CCDS",1131,326,13,4455,"*P CCDS",20.25,22.45,"*P CCDS",76.94,76.8,77.63,79.75,23.06,1470,0]
["UP Saga",977,1091,47,4609,"UP Saga",17.49,19.36,"UP Saga",46.19,39.55,47.24,82.51,53.81,2115,0]
[]
[]
["Support histogram: how many features are supported by n methods"]
["1256 are specific of Gencode"]
["Number of supporting methods","Present in AceView","Absent in AceView"]
[0,0,0]
[1,432,16188]
[2,785,2145]
[3,354,543]
[4,58,303]
[5,40,231]
[6,34,141]
[7,16,121]
[8,17,82]
[9,12,55]
[10,8,32]
[11,6,16]
[12,1,14]
[13,1,18]
[14,3,9]
[15,4,9]
[16,5,2]
[17,1,3]
[18,1,2]
[19,2,3]
[20,3,0]
["// done: 2006-01-24_23:38:10"]
["######################################################"]
["// start: 2006-01-24_23:38:10"]
["// data parsed, start statistics: 2006-01-24_23:38:20"]
["######################################################"]
["## Exons multi, just 31 regions, restricted to coding part"]
["Program","True positive, identical to Gencode","False positive, present in Gencode but over-used","False positive, non-coding in Gencode","False positive, new in multi-exon transcript","False positive, new in single exon transcript","False negative","Program","Sensitivity","Program","Raw specificity","Specificity, ignoring single exon transcripts","% missed exons","% wrong exons","All exons"]
["Gencode    ",5891,0,0,0,0,0,"Gencode    ",100,"Gencode    ",100,100,0,0,5891]
["*ECgene",5273,18115,652,4106,2792,618,"*ECgene",89.51,"*ECgene",17.04,18.73,10.49,82.96,30938]
["*AceView",5052,2291,795,1668,1004,839,"*AceView",85.76,"*AceView",46.73,51.52,14.24,53.27,10810]
["AceView",4976,2131,750,1312,163,915,"AceView",84.47,"AceView",53.32,54.27,15.53,46.68,9332]
["Exogean",4147,605,173,450,8,1746,"Exogean",70.4,"Exogean",77.04,77.15,29.64,22.96,5383]
["*ExonWalk",3963,3454,329,341,13,1930,"*ExonWalk",67.27,"*ExonWalk",48.93,49,32.76,51.07,8100]
["*KnownGene",3778,409,95,165,36,2115,"*KnownGene",64.13,"*KnownGene",84.27,84.96,35.9,15.73,4483]
["*Ensembl",3007,152,59,492,36,2886,"*Ensembl",51.04,"*Ensembl",80.27,81.05,48.99,19.73,3746]
["Ensembl",3004,152,59,492,36,2889,"Ensembl",50.99,"Ensembl",80.26,81.04,49.04,19.74,3743]
["Pairagon",2986,387,53,183,44,2905,"Pairagon",50.69,"Pairagon",81.74,82.74,49.31,18.26,3653]
["P Twinscan",2832,1031,136,1521,78,3061,"P Twinscan",48.07,"P Twinscan",50.59,51.3,51.96,49.41,5598]
["*RefSeq",2825,96,30,73,16,3068,"*RefSeq",47.95,"*RefSeq",92.93,93.42,52.08,7.07,3040]
["Fgenesh",2563,86,42,867,64,3330,"Fgenesh",43.51,"Fgenesh",70.76,72.03,56.53,29.24,3622]
["UP Jigsaw",2225,0,15,227,27,3668,"UP Jigsaw",37.77,"UP Jigsaw",89.21,90.19,62.26,10.79,2494]
["UP Augustus",2062,0,21,555,52,3831,"UP Augustus",35,"UP Augustus",76.65,78.17,65.03,23.35,2690]
["*U NscanEst",1994,0,22,313,37,3897,"*U NscanEst",33.85,"*U NscanEst",84.28,85.62,66.15,15.72,2366]
["UP ExonHunter ",1786,0,21,2263,194,4105,"UP ExonHunter ",30.32,"UP ExonHunter ",41.89,43.88,69.68,58.11,4264]
["*MGC",1745,367,61,61,17,4148,"*MGC",29.62,"*MGC",77.52,78.11,70.41,22.48,2251]
["UP GeneZilla",1721,0,34,1506,153,4172,"UP GeneZilla",29.21,"UP GeneZilla",50.41,52.78,70.82,49.59,3414]
["*P CCDS",1681,10,2,26,4,4212,"*P CCDS",28.54,"*P CCDS",97.56,97.79,71.5,2.44,1723]
["UP SGP2",1655,0,16,1545,140,4236,"UP SGP2",28.09,"UP SGP2",49.31,51.46,71.91,50.69,3356]
["*UP GenScan",1630,0,40,1785,41,4261,"*UP GenScan",27.67,"*UP GenScan",46.62,47.18,72.33,53.38,3496]
["UP Dogfish",1462,0,19,402,15,4429,"UP Dogfish",24.82,"UP Dogfish",77.03,77.64,75.18,22.97,1898]
["UP GeneID",1428,0,13,736,46,4465,"UP GeneID",24.24,"UP GeneID",64.24,65.59,75.79,35.76,2223]
["UP GeneMark",1337,0,15,1398,67,4554,"UP GeneMark",22.7,"UP GeneMark",47.46,48.62,77.3,52.54,2817]
["UP Saga",1072,0,4,994,45,4821,"UP Saga",18.2,"UP Saga",50.69,51.79,81.84,49.31,2115]
["Note: at this position in the standard output comes a histogram, which is obviously calculated over unique exons, not on multiple. It was manually removed from here, to avoid misleads."]
["// done: 2006-01-24_23:38:20"]
["######################################################"]
["// start: 2006-01-24_23:38:20"]
["// data parsed, start statistics: 2006-01-24_23:38:31"]
["######################################################"]
["## Exons projected, just 31 regions, restricted to coding part"]
["Program","True positive, identical to Gencode","False positive, non-coding in Gencode","False positive, new in multi-exon transcript","False positive, new in single exon transcript","False negative","Program","Sensitivity","Sensitivity eval","Program","Raw specificity","Specificity eval","Specificity, ignoring single exon transcripts","% missed exons","% wrong exons","All exons","Verif2"]
["Gencode    ",2768,0,0,0,0,"Gencode    ",100,0,"Gencode    ",100,0,100,0,0,2768,0]
["*AceView",2419,273,1835,997,349,"*AceView",87.39,0,"*AceView",43.78,0,53.42,12.61,56.22,5524,1]
["*ECgene",2403,105,1737,2693,365,"*ECgene",86.81,86.22,"*ECgene",34.62,35.08,56.55,13.19,65.38,6938,4]
["AceView",2367,242,1394,153,401,"AceView",85.51,85.75,"AceView",56.95,56.98,59.13,14.49,43.05,4156,0]
["UP Jigsaw",2225,15,227,27,545,"UP Jigsaw",80.38,80.61,"UP Jigsaw",89.21,89.33,90.19,19.69,10.79,2494,0]
["Exogean",2188,36,399,8,582,"Exogean",79.05,79.34,"Exogean",83.16,83.45,83.42,21.03,16.84,2631,0]
["*KnownGene",2182,23,213,36,588,"*KnownGene",78.83,0,"*KnownGene",88.92,0,90.24,21.24,11.08,2454,0]
["*Ensembl",2149,18,393,36,621,"*Ensembl",77.64,77.71,"*Ensembl",82.78,82.39,83.95,22.43,17.22,2596,0]
["Ensembl",2146,18,393,36,624,"Ensembl",77.53,77.53,"Ensembl",82.76,82.65,83.93,22.54,17.24,2593,0]
["Pairagon",2120,10,216,44,648,"Pairagon",76.59,76.85,"Pairagon",88.7,88.91,90.37,23.41,11.3,2390,0]
["*ExonWalk",2079,23,225,7,691,"*ExonWalk",75.11,0,"*ExonWalk",89.04,0,89.3,24.96,10.96,2334,1]
["*RefSeq",2077,11,88,16,693,"*RefSeq",75.04,0,"*RefSeq",94.75,0,95.45,25.04,5.25,2192,0]
["Fgenesh",2074,23,841,64,696,"Fgenesh",74.93,75.18,"Fgenesh",69.09,69.31,70.59,25.14,30.91,3002,0]
["UP Augustus",2062,21,555,52,708,"UP Augustus",74.49,74.67,"UP Augustus",76.65,76.76,78.17,25.58,23.35,2690,0]
["*U NscanEst",1994,22,313,37,774,"*U NscanEst",72.04,0,"*U NscanEst",84.28,0,85.62,27.96,15.72,2366,0]
["P Twinscan",1817,19,1026,78,953,"P Twinscan",65.64,65.56,"P Twinscan",61.8,61.65,63.49,34.43,38.2,2940,0]
["UP ExonHunter ",1786,21,2263,194,982,"UP ExonHunter ",64.52,64.44,"UP ExonHunter ",41.89,41.77,43.88,35.48,58.11,4264,0]
["UP GeneZilla",1721,34,1506,153,1049,"UP GeneZilla",62.17,62.08,"UP GeneZilla",50.41,50.25,52.78,37.9,49.59,3414,0]
["UP SGP2",1655,16,1545,140,1113,"UP SGP2",59.79,59.73,"UP SGP2",49.31,49.2,51.46,40.21,50.69,3356,0]
["*UP GenScan",1630,40,1785,41,1138,"*UP GenScan",58.89,58.65,"*UP GenScan",46.62,46.37,47.18,41.11,53.38,3496,0]
["UP Dogfish",1462,19,402,15,1306,"UP Dogfish",52.82,53.11,"UP Dogfish",77.03,77.34,77.64,47.18,22.97,1898,0]
["*P CCDS",1439,1,26,4,1331,"*P CCDS",51.99,51.95,"*P CCDS",97.89,97.75,98.16,48.09,2.11,1470,0]
["UP GeneID",1428,13,736,46,1342,"UP GeneID",51.59,51.41,"UP GeneID",64.24,63.92,65.59,48.48,35.76,2223,0]
["*MGC",1377,8,86,13,1393,"*MGC",49.75,0,"*MGC",92.79,0,93.61,50.33,7.21,1484,0]
["UP GeneMark",1337,15,1398,67,1431,"UP GeneMark",48.3,50.58,"UP GeneMark",47.46,29.01,48.62,51.7,52.54,2817,0]
["UP Saga",1072,4,994,45,1698,"UP Saga",38.73,38.82,"UP Saga",50.69,50.73,51.79,61.34,49.31,2115,0]
[]
[]
["Support histogram: how many features are supported by n methods"]
["161 are specific of Gencode"]
["Number of supporting methods","Present in AceView","Absent in AceView"]
[0,0,0]
[1,484,14519]
[2,683,1667]
[3,335,346]
[4,108,137]
[5,43,80]
[6,27,52]
[7,21,41]
[8,20,26]
[9,11,15]
[10,19,11]
[11,7,13]
[12,3,7]
[13,3,18]
[14,6,13]
[15,4,7]
[16,4,3]
[17,3,3]
[18,1,1]
[19,1,3]
[20,4,0]
[21,0,0]
[22,0,0]
[23,0,0]
[24,1,0]
["// done: 2006-01-24_23:38:31"]
["######################################################"]

{"sheet":"Complete models","index":5,"n_rows":323,"n_cols":195,"rows_kept":323,"flags":["formulas_cached_only"]}
["COMPARISONS OF COMPLETE MODELS PROPOSED BY THE 25 TRACKS, IN QUANTITATIVE AND QUALITATIVE MODES, OVER ENTIRE TRANSCRIPTS OR RESTRICTED TO REGIONS ANNOTATED AS CDS. DIFFERENT REFERENCE ARE USED HERE."]
["This sheet contains the direct output for various tracks, taken as reference. In this order: Havana/Gencode, AceView public (Aug05), EGASP AceView, Ecgene, "]
["REFERENCE HAVANA/GENCODE",{"$nulls":13},"REFERENCE ACEVIEW, PUBLIC VERSION AUG05",{"$nulls":13},"REFERENCE EGASP ACEVIEW, APRIL 05, SEMI MANUAL",{"$nulls":13},"REFERENCE ECGene",{"$nulls":13},"REFERENCE UCSC Known Gene",{"$nulls":13},"REFERENCE EXONWALK",{"$nulls":13},"REFERENCE EXOGEAN",{"$nulls":13},"REFERENCE REFSEQ",{"$nulls":13},"REFERENCE PAIRAGON ANY",{"$nulls":13},"REFERENCE ENSEMBL",{"$nulls":13},"REFERENCE FGENESH",{"$nulls":13},"REFERENCE MGC",{"$nulls":13},"REFERENCE CCDS",{"$nulls":13},"REFERENCE JIGSAW"]
["// start: 2006-03-03_21:46:40",{"$nulls":13},"// start: 2006-03-03_21:56:17",{"$nulls":13},"// start: 2006-03-03_21:56:37",{"$nulls":13},"// start: 2006-03-03_17:29:18",{"$nulls":13},"// start: 2006-03-03_21:57:20",{"$nulls":13},"// start: 2006-03-03_21:57:38",{"$nulls":13},"// start: 2006-03-03_21:57:57",{"$nulls":13},"// start: 2006-03-03_21:58:16",{"$nulls":13},"// start: 2006-03-03_21:58:35",{"$nulls":13},"// start: 2006-03-03_21:58:54",{"$nulls":13},"// start: 2006-03-03_21:59:12",{"$nulls":13},"// start: 2006-03-03_21:59:30",{"$nulls":13},"// start: 2006-03-03_22:02:54",{"$nulls":13},"// start: 2006-03-03_21:59:50"]
["// data parsed, start statistics: 2006-03-03_21:46:48",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:56:25",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:56:45",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_17:29:33",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:57:28",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:57:46",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:06",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:24",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:43",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:02",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:20",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:38",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_22:03:02",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:58"]
["######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################"]
["## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions"]
["Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna",{"$nulls":13},"Found 23594 mrna"]
[]
[]
["Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method"]
["Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon"]
["Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46]
["*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7,{"$nulls":6},"*ECgene",3851,2569,6420,37080,10271,30660,27.7]
["*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93,{"$nulls":6},"*AceView",1792,902,2694,12486,4486,9792,35.93]
["AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14,{"$nulls":6},"Gencode",1691,70,1761,11454,3452,9693,30.14]
["*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19,{"$nulls":6},"AceView",1630,24,1654,11251,3284,9597,29.19]
["UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96,{"$nulls":6},"*ExonWalk",892,3,895,8952,1787,8057,19.96]
["Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01]
["UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48,{"$nulls":6},"Exogean",554,2,556,6734,1110,6178,16.48]
["UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63]
["P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42]
["*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47]
["UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18,{"$nulls":6},"*KnownGene",501,53,554,4981,1055,4427,21.18]
["Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19]
["Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63,{"$nulls":6},"Pairagon",471,38,509,3979,980,3470,24.63]
["*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87,{"$nulls":6},"Fgenesh",462,97,559,3800,1021,3241,26.87]
["Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61,{"$nulls":6},"*Ensembl",427,58,485,4033,912,3548,22.61]
["*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58,{"$nulls":6},"Ensembl",427,56,483,4031,910,3548,22.58]
["*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28]
["UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94,{"$nulls":6},"*RefSeq",342,41,383,3305,725,2922,21.94]
["*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52]
["UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22,{"$nulls":6},"*MGC",323,19,342,2443,665,2101,27.22]
["*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43]
["UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72,{"$nulls":6},"*U NscanEst",282,27,309,2601,591,2292,22.72]
["UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32]
["UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29]
["*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14]
[]
["Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns"]
["Program","Transcript identical to Gencode","Transcript best matching Gencode","New transcript in Gencode gene","New transcript in new gene","Program","Missed Gencode transcript in touched gene","Missed Gencode transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *AceView","Transcript best matching *AceView","New transcript in *AceView gene","New transcript in new gene","Program","Missed *AceView transcript in touched gene","Missed *AceView transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to AceView","Transcript best matching AceView","New transcript in AceView gene","New transcript in new gene","Program","Missed AceView transcript in touched gene","Missed AceView transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *ECgene","Transcript best matching *ECgene","New transcript in *ECgene gene","New transcript in new gene","Program","Missed *ECgene transcript in touched gene","Missed *ECgene transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *KnownGene","Transcript best matching *KnownGene","New transcript in *KnownGene gene","New transcript in new gene","Program","Missed *KnownGene transcript in touched gene","Missed *KnownGene transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *ExonWalk","Transcript best matching *ExonWalk","New transcript in *ExonWalk gene","New transcript in new gene","Program","Missed *ExonWalk transcript in touched gene","Missed *ExonWalk transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to Exogean","Transcript best matching Exogean","New transcript in Exogean gene","New transcript in new gene","Program","Missed Exogean transcript in touched gene","Missed Exogean transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *RefSeq","Transcript best matching *RefSeq","New transcript in *RefSeq gene","New transcript in new gene","Program","Missed *RefSeq transcript in touched gene","Missed *RefSeq transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to Pairagon","Transcript best matching Pairagon","New transcript in Pairagon gene","New transcript in new gene","Program","Missed Pairagon transcript in touched gene","Missed Pairagon transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *Ensembl","Transcript best matching *Ensembl","New transcript in *Ensembl gene","New transcript in new gene","Program","Missed *Ensembl transcript in touched gene","Missed *Ensembl transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to Fgenesh","Transcript best matching Fgenesh","New transcript in Fgenesh gene","New transcript in new gene","Program","Missed Fgenesh transcript in touched gene","Missed Fgenesh transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *MGC","Transcript best matching *MGC","New transcript in *MGC gene","New transcript in new gene","Program","Missed *MGC transcript in touched gene","Missed *MGC transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to *P CCDS","Transcript best matching *P CCDS","New transcript in *P CCDS gene","New transcript in new gene","Program","Missed *P CCDS transcript in touched gene","Missed *P CCDS transcript in missed gene","Sensitivity","Specificity","Verif",{"$nulls":3},"Program","Transcript identical to UP Jigsaw","Transcript best matching UP Jigsaw","New transcript in UP Jigsaw gene","New transcript in new gene","Program","Missed UP Jigsaw transcript in touched gene","Missed UP Jigsaw transcript in missed gene","Sensitivity","Specificity","Verif"]
["Gencode",1691,0,0,0,"Gencode",0,0,100,100,0,{"$nulls":3},"*AceView",1792,0,0,0,"*AceView",0,0,100,100,0,{"$nulls":3},"AceView",1630,0,0,0,"AceView",0,0,100,100,0,{"$nulls":3},"*ECgene",3851,0,0,0,"*ECgene",0,0,100,100,0,{"$nulls":3},"*KnownGene",501,0,0,0,"*KnownGene",0,0,100,100,0,{"$nulls":3},"*ExonWalk",892,0,0,0,"*ExonWalk",0,0,100,100,0,{"$nulls":3},"Exogean",554,0,0,0,"Exogean",0,0,100,100,0,{"$nulls":3},"*RefSeq",342,0,0,0,"*RefSeq",0,0,100,100,0,{"$nulls":3},"Pairagon",471,0,0,0,"Pairagon",0,0,100,100,0,{"$nulls":3},"*Ensembl",427,0,0,0,"*Ensembl",0,0,100,100,0,{"$nulls":3},"Fgenesh",462,0,0,0,"Fgenesh",0,0,100,100,0,{"$nulls":3},"*MGC",323,0,0,0,"*MGC",0,0,100,100,0,{"$nulls":3},"*P CCDS",201,0,0,0,"*P CCDS",0,0,100,100,0,{"$nulls":3},"UP Jigsaw",259,0,0,0,"UP Jigsaw",0,0,100,100,0]
["*AceView",1191,206,225,170,"*AceView",210,84,70.43,66.46,0,{"$nulls":3},"AceView",1338,146,94,52,"AceView",175,133,74.67,82.09,0,{"$nulls":3},"*AceView",1338,146,173,135,"*AceView",108,38,82.09,74.67,0,{"$nulls":3},"*AceView",1068,461,89,174,"*AceView",2055,267,27.73,59.6,0,{"$nulls":3},"*AceView",385,86,719,602,"*AceView",22,8,76.85,21.48,0,{"$nulls":3},"*ECgene",492,324,1855,1180,"*ECgene",57,19,55.16,12.78,0,{"$nulls":3},"AceView",390,126,602,512,"AceView",17,21,70.4,23.93,0,{"$nulls":3},"*AceView",304,29,819,640,"*AceView",5,4,88.89,16.96,0,{"$nulls":3},"*ECgene",315,88,2113,1335,"*ECgene",39,29,66.88,8.18,0,{"$nulls":3},"Ensembl",427,0,0,0,"Ensembl",0,0,100,100,0,{"$nulls":3},"*ECgene",210,104,2040,1497,"*ECgene",39,109,45.45,5.45,0,{"$nulls":3},"*ECgene",223,68,1916,1644,"*ECgene",30,2,69.04,5.79,0,{"$nulls":3},"Gencode",149,34,493,1015,"Gencode",2,16,74.13,8.81,0,{"$nulls":3},"Gencode",147,79,764,701,"Gencode",3,30,56.76,8.69,0]
["AceView",1139,181,175,135,"AceView",228,143,67.36,69.88,0,{"$nulls":3},"Gencode",1191,206,173,121,"Gencode",227,168,66.46,70.43,0,{"$nulls":3},"Gencode",1139,181,226,145,"Gencode",176,134,69.88,67.36,0,{"$nulls":3},"Gencode",1017,422,102,150,"Gencode",1922,490,26.41,60.14,0,{"$nulls":3},"Gencode",385,79,675,552,"Gencode",20,17,76.85,22.77,0,{"$nulls":3},"*AceView",396,274,488,634,"*AceView",196,26,44.39,22.1,0,{"$nulls":3},"*AceView",383,138,702,569,"*AceView",18,15,69.13,21.37,0,{"$nulls":3},"*KnownGene",287,21,149,44,"*KnownGene",17,17,83.92,57.29,0,{"$nulls":3},"*AceView",296,103,746,647,"*AceView",36,36,62.85,16.52,0,{"$nulls":3},"*AceView",270,90,809,623,"*AceView",33,34,63.23,15.07,0,{"$nulls":3},"*AceView",209,106,771,706,"*AceView",31,116,45.24,11.66,0,{"$nulls":3},"Gencode",216,74,634,767,"Gencode",24,9,66.87,12.77,0,{"$nulls":3},"Ensembl",146,25,48,208,"Ensembl",1,29,72.64,34.19,0,{"$nulls":3},"*ECgene",144,82,1908,1717,"*ECgene",22,11,55.6,3.74,0]
["*ECgene",1017,422,1912,500,"*ECgene",181,71,60.14,26.41,0,{"$nulls":3},"*ECgene",1068,461,1880,442,"*ECgene",174,89,59.6,27.73,0,{"$nulls":3},"*ECgene",999,407,1920,525,"*ECgene",162,62,61.29,25.94,0,{"$nulls":3},"AceView",999,407,82,142,"AceView",1948,497,25.94,61.29,0,{"$nulls":3},"AceView",378,83,623,546,"AceView",26,14,75.45,23.19,0,{"$nulls":3},"Gencode",391,263,481,556,"Gencode",188,50,43.83,23.12,0,{"$nulls":3},"Gencode",377,144,657,513,"Gencode",11,22,68.05,22.29,0,{"$nulls":3},"*ECgene",285,47,2142,1377,"*ECgene",8,2,83.33,7.4,0,{"$nulls":3},"Gencode",286,112,702,591,"Gencode",33,40,60.72,16.91,0,{"$nulls":3},"Gencode",269,91,769,562,"Gencode",16,51,63,15.91,0,{"$nulls":3},"Gencode",205,107,715,664,"Gencode",5,145,44.37,12.12,0,{"$nulls":3},"*AceView",209,77,688,818,"*AceView",30,7,64.71,11.66,0,{"$nulls":3},"*Ensembl",146,25,48,208,"*Ensembl",1,29,72.64,34.19,0,{"$nulls":3},"*P CCDS",138,21,25,17,"*P CCDS",0,100,53.28,68.66,0]
["*ExonWalk",391,263,188,50,"*ExonWalk",482,555,23.12,43.83,0,{"$nulls":3},"*ExonWalk",396,274,170,52,"*ExonWalk",490,632,22.1,44.39,0,{"$nulls":3},"Exogean",390,126,16,22,"Exogean",602,512,23.93,70.4,0,{"$nulls":3},"*ExonWalk",492,324,25,51,"*ExonWalk",1857,1178,12.78,55.16,0,{"$nulls":3},"*ECgene",356,114,2056,1325,"*ECgene",25,6,71.06,9.24,0,{"$nulls":3},"AceView",389,258,430,553,"AceView",189,56,43.61,23.87,0,{"$nulls":3},"*ECgene",325,189,2205,1132,"*ECgene",33,7,58.66,8.44,0,{"$nulls":3},"Gencode",284,45,775,587,"Gencode",6,7,83.04,16.79,0,{"$nulls":3},"*RefSeq",274,25,23,20,"*RefSeq",105,67,58.17,80.12,0,{"$nulls":3},"AceView",259,93,708,570,"AceView",13,62,60.66,15.89,0,{"$nulls":3},"*RefSeq",203,70,22,47,"*RefSeq",6,183,43.94,59.36,0,{"$nulls":3},"AceView",208,67,619,736,"AceView",30,18,64.4,12.76,0,{"$nulls":3},"*RefSeq",144,26,34,138,"*RefSeq",0,31,71.64,42.11,0,{"$nulls":3},"*KnownGene",136,60,195,110,"*KnownGene",2,61,52.51,27.15,0]
["*KnownGene",385,79,19,18,"*KnownGene",684,543,22.77,76.85,0,{"$nulls":3},"*KnownGene",385,86,17,13,"*KnownGene",729,592,21.48,76.85,0,{"$nulls":3},"*ExonWalk",389,258,189,56,"*ExonWalk",431,552,23.87,43.61,0,{"$nulls":3},"*KnownGene",356,114,10,21,"*KnownGene",2105,1276,9.24,71.06,0,{"$nulls":3},"*RefSeq",287,21,17,17,"*RefSeq",149,44,57.29,83.92,0,{"$nulls":3},"*KnownGene",249,110,73,69,"*KnownGene",380,153,27.91,49.7,0,{"$nulls":3},"*KnownGene",266,115,68,52,"*KnownGene",99,74,48.01,53.09,0,{"$nulls":3},"AceView",279,45,723,583,"AceView",9,9,81.58,17.12,0,{"$nulls":3},"AceView",273,114,657,586,"AceView",32,52,57.96,16.75,0,{"$nulls":3},"*ECgene",256,112,2164,1319,"*ECgene",38,21,59.95,6.65,0,{"$nulls":3},"Pairagon",197,71,113,90,"Pairagon",21,173,42.64,41.83,0,{"$nulls":3},"*KnownGene",204,31,156,110,"*KnownGene",74,14,63.16,40.72,0,{"$nulls":3},"*AceView",143,37,531,1081,"*AceView",10,11,71.14,7.98,0,{"$nulls":3},"*AceView",135,89,805,763,"*AceView",15,20,52.12,7.53,0]
["Exogean",377,144,10,23,"Exogean",657,513,22.29,68.05,0,{"$nulls":3},"Exogean",383,138,12,21,"Exogean",702,569,21.37,69.13,0,{"$nulls":3},"*KnownGene",378,83,25,15,"*KnownGene",629,540,23.19,75.45,0,{"$nulls":3},"Exogean",325,189,12,28,"Exogean",2207,1130,8.44,58.66,0,{"$nulls":3},"Pairagon",267,41,80,83,"Pairagon",123,70,53.29,56.69,0,{"$nulls":3},"Exogean",232,170,64,88,"Exogean",374,116,26.01,41.88,0,{"$nulls":3},"*ExonWalk",232,170,374,116,"*ExonWalk",64,88,41.88,26.01,0,{"$nulls":3},"Pairagon",274,25,94,78,"Pairagon",25,18,80.12,58.17,0,{"$nulls":3},"*KnownGene",267,41,120,73,"*KnownGene",91,72,56.69,53.29,0,{"$nulls":3},"*KnownGene",231,83,137,50,"*KnownGene",27,86,54.1,46.11,0,{"$nulls":3},"AceView",193,112,683,642,"AceView",8,149,41.77,11.84,0,{"$nulls":3},"Pairagon",200,41,102,128,"Pairagon",50,32,61.92,42.46,0,{"$nulls":3},"*ECgene",143,36,1358,2314,"*ECgene",16,6,71.14,3.71,0,{"$nulls":3},"Fgenesh",135,72,57,198,"Fgenesh",6,46,52.12,29.22,0]
["Pairagon",286,112,21,52,"Pairagon",712,581,16.91,60.72,0,{"$nulls":3},"*RefSeq",304,29,1,8,"*RefSeq",823,636,16.96,88.89,0,{"$nulls":3},"*RefSeq",279,45,8,10,"*RefSeq",726,580,17.12,81.58,0,{"$nulls":3},"Pairagon",315,88,11,57,"Pairagon",2131,1317,8.18,66.88,0,{"$nulls":3},"Exogean",266,115,97,76,"Exogean",68,52,53.09,48.01,0,{"$nulls":3},"*RefSeq",222,60,23,37,"*RefSeq",454,156,24.89,64.91,0,{"$nulls":3},"*RefSeq",220,67,23,32,"*RefSeq",174,93,39.71,64.33,0,{"$nulls":3},"Ensembl",224,56,52,95,"Ensembl",45,17,65.5,52.46,0,{"$nulls":3},"*ExonWalk",220,91,419,162,"*ExonWalk",62,98,46.71,24.66,0,{"$nulls":3},"*RefSeq",224,56,41,21,"*RefSeq",58,89,52.46,65.5,0,{"$nulls":3},"*KnownGene",191,72,147,91,"*KnownGene",11,188,41.34,38.12,0,{"$nulls":3},"*ExonWalk",163,71,423,235,"*ExonWalk",49,40,50.46,18.27,0,{"$nulls":3},"*KnownGene",142,26,128,205,"*KnownGene",3,30,70.65,28.34,0,{"$nulls":3},"AceView",133,92,726,679,"AceView",0,34,51.35,8.16,0]
["*RefSeq",284,45,5,8,"*RefSeq",780,582,16.79,83.04,0,{"$nulls":3},"Pairagon",296,103,17,55,"Pairagon",754,639,16.52,62.85,0,{"$nulls":3},"Pairagon",273,114,28,56,"Pairagon",664,579,16.75,57.96,0,{"$nulls":3},"*RefSeq",285,47,2,8,"*RefSeq",2173,1346,7.4,83.33,0,{"$nulls":3},"*ExonWalk",249,110,380,153,"*ExonWalk",73,69,49.7,27.91,0,{"$nulls":3},"Pairagon",220,91,61,99,"Pairagon",419,162,24.66,46.71,0,{"$nulls":3},"Pairagon",209,99,73,90,"Pairagon",141,105,37.73,44.37,0,{"$nulls":3},"*Ensembl",224,56,52,95,"*Ensembl",45,17,65.5,52.46,0,{"$nulls":3},"Ensembl",212,70,36,109,"Ensembl",124,65,45.01,49.65,0,{"$nulls":3},"Pairagon",212,70,110,79,"Pairagon",41,104,49.65,45.01,0,{"$nulls":3},"Ensembl",167,92,58,110,"Ensembl",33,170,36.15,39.11,0,{"$nulls":3},"*RefSeq",158,44,59,81,"*RefSeq",91,30,48.92,46.2,0,{"$nulls":3},"Fgenesh",141,31,29,261,"Fgenesh",6,23,70.15,30.52,0,{"$nulls":3},"*ExonWalk",129,56,475,232,"*ExonWalk",2,72,49.81,14.46,0]
["Ensembl",269,91,10,57,"Ensembl",777,554,15.91,63,0,{"$nulls":3},"Ensembl",270,90,7,60,"Ensembl",818,614,15.07,63.23,0,{"$nulls":3},"Ensembl",259,93,12,63,"Ensembl",716,562,15.89,60.66,0,{"$nulls":3},"Ensembl",256,112,7,52,"Ensembl",2202,1281,6.65,59.95,0,{"$nulls":3},"Ensembl",231,83,21,92,"Ensembl",145,42,46.11,54.1,0,{"$nulls":3},"Ensembl",201,96,27,103,"Ensembl",463,132,22.53,47.07,0,{"$nulls":3},"Ensembl",206,106,21,94,"Ensembl",155,87,37.18,48.24,0,{"$nulls":3},"*ExonWalk",222,60,454,156,"*ExonWalk",23,37,64.91,24.89,0,{"$nulls":3},"*Ensembl",212,70,36,109,"*Ensembl",124,65,45.01,49.65,0,{"$nulls":3},"Exogean",206,106,150,92,"Exogean",21,94,48.24,37.18,0,{"$nulls":3},"*Ensembl",167,92,58,110,"*Ensembl",33,170,36.15,39.11,0,{"$nulls":3},"Exogean",152,77,169,156,"Exogean",60,34,47.06,27.44,0,{"$nulls":3},"AceView",140,40,461,989,"AceView",2,19,69.65,8.59,0,{"$nulls":3},"Pairagon",128,64,146,133,"Pairagon",5,62,49.42,27.18,0]
["*Ensembl",269,91,10,57,"*Ensembl",777,554,15.91,63,0,{"$nulls":3},"*Ensembl",270,90,7,60,"*Ensembl",818,614,15.07,63.23,0,{"$nulls":3},"*Ensembl",259,93,12,63,"*Ensembl",716,562,15.89,60.66,0,{"$nulls":3},"*Ensembl",256,112,7,52,"*Ensembl",2208,1275,6.65,59.95,0,{"$nulls":3},"*Ensembl",231,83,21,92,"*Ensembl",145,42,46.11,54.1,0,{"$nulls":3},"*Ensembl",201,96,27,103,"*Ensembl",463,132,22.53,47.07,0,{"$nulls":3},"*Ensembl",206,106,21,94,"*Ensembl",155,87,37.18,48.24,0,{"$nulls":3},"Exogean",220,67,172,95,"Exogean",23,32,64.33,39.71,0,{"$nulls":3},"Exogean",209,99,138,108,"Exogean",73,90,44.37,37.73,0,{"$nulls":3},"*ExonWalk",201,96,462,133,"*ExonWalk",27,103,47.07,22.53,0,{"$nulls":3},"*ExonWalk",164,88,449,191,"*ExonWalk",18,192,35.5,18.39,0,{"$nulls":3},"Ensembl",143,66,59,159,"Ensembl",84,30,44.27,33.49,0,{"$nulls":3},"Pairagon",140,30,100,201,"Pairagon",2,29,69.65,29.72,0,{"$nulls":3},"*RefSeq",123,63,70,86,"*RefSeq",4,69,47.49,35.96,0]
["*MGC",216,74,24,9,"*MGC",638,763,12.77,66.87,0,{"$nulls":3},"Fgenesh",209,106,1,146,"Fgenesh",800,677,11.66,45.24,0,{"$nulls":3},"*MGC",208,67,30,18,"*MGC",621,734,12.76,64.4,0,{"$nulls":3},"*MGC",223,68,18,14,"*MGC",1950,1610,5.79,69.04,0,{"$nulls":3},"*MGC",204,31,73,15,"*MGC",157,109,40.72,63.16,0,{"$nulls":3},"Fgenesh",164,88,18,192,"Fgenesh",457,183,18.39,35.5,0,{"$nulls":3},"*MGC",152,77,60,34,"*MGC",170,155,27.44,47.06,0,{"$nulls":3},"Fgenesh",203,70,4,185,"Fgenesh",31,38,59.36,43.94,0,{"$nulls":3},"*MGC",200,41,50,32,"*MGC",108,122,42.46,61.92,0,{"$nulls":3},"Fgenesh",167,92,29,174,"Fgenesh",69,99,39.11,36.15,0,{"$nulls":3},"Exogean",147,111,177,119,"Exogean",20,184,31.82,26.53,0,{"$nulls":3},"*Ensembl",143,66,59,159,"*Ensembl",84,30,44.27,33.49,0,{"$nulls":3},"UP Jigsaw",138,21,0,100,"UP Jigsaw",25,17,68.66,53.28,0,{"$nulls":3},"Ensembl",120,83,93,131,"Ensembl",1,55,46.33,28.1,0]
["Fgenesh",205,107,3,147,"Fgenesh",737,642,12.12,44.37,0,{"$nulls":3},"*MGC",209,77,24,13,"*MGC",691,815,11.66,64.71,0,{"$nulls":3},"Fgenesh",193,112,7,150,"Fgenesh",715,610,11.84,41.77,0,{"$nulls":3},"Fgenesh",210,104,1,147,"Fgenesh",2091,1446,5.45,45.45,0,{"$nulls":3},"Fgenesh",191,72,10,189,"Fgenesh",154,84,38.12,41.34,0,{"$nulls":3},"*MGC",163,71,49,40,"*MGC",423,235,18.27,50.46,0,{"$nulls":3},"Fgenesh",147,111,20,184,"Fgenesh",185,111,26.53,31.82,0,{"$nulls":3},"*MGC",158,44,90,31,"*MGC",60,80,46.2,48.92,0,{"$nulls":3},"Fgenesh",197,71,19,175,"Fgenesh",132,71,41.83,42.64,0,{"$nulls":3},"*P CCDS",146,25,1,29,"*P CCDS",55,201,34.19,72.64,0,{"$nulls":3},"*P CCDS",141,31,6,23,"*P CCDS",32,258,30.52,70.15,0,{"$nulls":3},"Fgenesh",117,56,42,247,"Fgenesh",100,50,36.22,25.32,0,{"$nulls":3},"*ExonWalk",123,37,360,372,"*ExonWalk",4,37,61.19,13.79,0,{"$nulls":3},"*Ensembl",120,83,93,131,"*Ensembl",1,55,46.33,28.1,0]
["*P CCDS",149,34,2,16,"*P CCDS",511,997,8.81,74.13,0,{"$nulls":3},"*P CCDS",143,37,0,21,"*P CCDS",554,1058,7.98,71.14,0,{"$nulls":3},"*P CCDS",140,40,2,19,"*P CCDS",489,961,8.59,69.65,0,{"$nulls":3},"UP Jigsaw",144,82,1,32,"UP Jigsaw",1983,1642,3.74,55.6,0,{"$nulls":3},"*P CCDS",142,26,3,30,"*P CCDS",139,194,28.34,70.65,0,{"$nulls":3},"UP Jigsaw",129,56,1,73,"UP Jigsaw",488,219,14.46,49.81,0,{"$nulls":3},"*P CCDS",113,45,3,40,"*P CCDS",138,258,20.4,56.22,0,{"$nulls":3},"*P CCDS",144,26,0,31,"*P CCDS",48,124,42.11,71.64,0,{"$nulls":3},"*U NscanEst",146,90,2,44,"*U NscanEst",164,71,31,51.77,0,{"$nulls":3},"*MGC",143,66,81,33,"*MGC",60,158,33.49,44.27,0,{"$nulls":3},"UP Jigsaw",135,72,4,48,"UP Jigsaw",67,188,29.22,52.12,0,{"$nulls":3},"UP Jigsaw",103,47,2,107,"UP Jigsaw",112,61,31.89,39.77,0,{"$nulls":3},"Exogean",113,45,130,266,"Exogean",3,40,56.22,20.4,0,{"$nulls":3},"Exogean",112,84,216,142,"Exogean",2,61,43.24,20.22,0]
["UP Jigsaw",147,79,1,32,"UP Jigsaw",793,672,8.69,56.76,0,{"$nulls":3},"UP Jigsaw",135,89,0,35,"UP Jigsaw",839,729,7.53,52.12,0,{"$nulls":3},"UP Jigsaw",133,92,0,34,"UP Jigsaw",764,641,8.16,51.35,0,{"$nulls":3},"*P CCDS",143,36,1,21,"*P CCDS",1391,2281,3.71,71.14,0,{"$nulls":3},"UP Jigsaw",136,60,0,63,"UP Jigsaw",209,96,27.15,52.51,0,{"$nulls":3},"*P CCDS",123,37,4,37,"*P CCDS",370,362,13.79,61.19,0,{"$nulls":3},"UP Jigsaw",112,84,2,61,"UP Jigsaw",230,128,20.22,43.24,0,{"$nulls":3},"UP Jigsaw",123,63,3,70,"UP Jigsaw",88,68,35.96,47.49,0,{"$nulls":3},"*P CCDS",140,30,2,29,"*P CCDS",114,187,29.72,69.65,0,{"$nulls":3},"UP Jigsaw",120,83,0,56,"UP Jigsaw",110,114,28.1,46.33,0,{"$nulls":3},"*MGC",117,56,93,57,"*MGC",42,247,25.32,36.22,0,{"$nulls":3},"*P CCDS",96,30,10,65,"*P CCDS",85,112,29.72,47.76,0,{"$nulls":3},"*MGC",96,30,76,121,"*MGC",10,65,47.76,29.72,0,{"$nulls":3},"*MGC",103,47,100,73,"*MGC",2,107,39.77,31.89,0]
["*U NscanEst",105,108,1,68,"*U NscanEst",823,655,6.21,37.23,0,{"$nulls":3},"*U NscanEst",97,115,0,70,"*U NscanEst",891,689,5.41,34.4,0,{"$nulls":3},"UP Augustus",95,134,4,79,"UP Augustus",735,666,5.83,30.45,0,{"$nulls":3},"*U NscanEst",98,113,0,71,"*U NscanEst",2108,1532,2.54,34.75,0,{"$nulls":3},"UP Augustus",91,104,6,111,"UP Augustus",198,108,18.16,29.17,0,{"$nulls":3},"*U NscanEst",91,88,2,101,"*U NscanEst",547,166,10.2,32.27,0,{"$nulls":3},"*U NscanEst",74,112,1,95,"*U NscanEst",240,128,13.36,26.24,0,{"$nulls":3},"*U NscanEst",82,99,1,100,"*U NscanEst",101,60,23.98,29.08,0,{"$nulls":3},"UP Jigsaw",128,64,4,63,"UP Jigsaw",170,109,27.18,49.42,0,{"$nulls":3},"*U NscanEst",82,106,1,93,"*U NscanEst",107,132,19.2,29.08,0,{"$nulls":3},"UP Augustus",95,115,15,87,"UP Augustus",66,186,20.56,30.45,0,{"$nulls":3},"UP Augustus",70,78,2,162,"UP Augustus",110,65,21.67,22.44,0,{"$nulls":3},"UP Augustus",88,62,6,156,"UP Augustus",29,22,43.78,28.21,0,{"$nulls":3},"UP Augustus",99,117,18,78,"UP Augustus",10,33,38.22,31.73,0]
["UP Augustus",99,134,1,78,"UP Augustus",778,680,5.85,31.73,0,{"$nulls":3},"UP Augustus",94,141,1,76,"UP Augustus",823,734,5.25,30.13,0,{"$nulls":3},"*U NscanEst",92,115,0,75,"*U NscanEst",793,630,5.64,32.62,0,{"$nulls":3},"UP Augustus",96,142,1,73,"UP Augustus",1962,1651,2.49,30.77,0,{"$nulls":3},"*U NscanEst",88,97,1,96,"*U NscanEst",212,104,17.56,31.21,0,{"$nulls":3},"UP Augustus",83,107,7,115,"UP Augustus",471,231,9.3,26.6,0,{"$nulls":3},"UP Augustus",67,131,7,107,"UP Augustus",214,142,12.09,21.47,0,{"$nulls":3},"UP Augustus",77,108,10,117,"UP Augustus",79,78,22.51,24.68,0,{"$nulls":3},"UP Augustus",86,106,12,108,"UP Augustus",166,113,18.26,27.56,0,{"$nulls":3},"UP Augustus",81,120,7,104,"UP Augustus",107,119,18.97,25.96,0,{"$nulls":3},"*U NscanEst",81,102,2,97,"*U NscanEst",82,197,17.53,28.72,0,{"$nulls":3},"*U NscanEst",69,85,0,128,"*U NscanEst",107,62,21.36,24.47,0,{"$nulls":3},"P Twinscan",73,77,105,292,"P Twinscan",11,40,36.32,13.35,0,{"$nulls":3},"*U NscanEst",81,89,3,109,"*U NscanEst",18,71,31.27,28.72,0]
["P Twinscan",76,242,48,181,"P Twinscan",581,792,4.49,13.89,0,{"$nulls":3},"P Twinscan",74,255,34,184,"P Twinscan",612,851,4.13,13.53,0,{"$nulls":3},"P Twinscan",74,241,53,179,"P Twinscan",536,779,4.54,13.53,0,{"$nulls":3},"P Twinscan",73,264,33,177,"P Twinscan",1514,2000,1.9,13.35,0,{"$nulls":3},"P Twinscan",67,181,81,218,"P Twinscan",113,140,13.37,12.25,0,{"$nulls":3},"P Twinscan",68,184,69,226,"P Twinscan",333,307,7.62,12.43,0,{"$nulls":3},"P Twinscan",52,200,77,218,"P Twinscan",124,178,9.39,9.51,0,{"$nulls":3},"P Twinscan",61,136,118,232,"P Twinscan",43,102,17.84,11.15,0,{"$nulls":3},"P Twinscan",69,154,113,211,"P Twinscan",98,150,14.65,12.61,0,{"$nulls":3},"P Twinscan",63,159,113,212,"P Twinscan",53,152,14.75,11.52,0,{"$nulls":3},"P Twinscan",79,136,129,203,"P Twinscan",38,209,17.1,14.44,0,{"$nulls":3},"P Twinscan",50,105,72,320,"P Twinscan",64,104,15.48,9.14,0,{"$nulls":3},"*U NscanEst",71,52,0,159,"*U NscanEst",33,45,35.32,25.18,0,{"$nulls":3},"P Twinscan",78,112,164,193,"P Twinscan",5,64,30.12,14.26,0]
["UP SGP2",51,145,1,355,"UP SGP2",692,803,3.02,9.24,0,{"$nulls":3},"UP GeneMark",50,168,1,332,"UP GeneMark",713,861,2.79,9.07,0,{"$nulls":3},"UP GeneMark",45,171,0,335,"UP GeneMark",646,768,2.76,8.17,0,{"$nulls":3},"UP GeneMark",50,168,4,329,"UP GeneMark",1606,2027,1.3,9.07,0,{"$nulls":3},"UP SGP2",41,128,3,380,"UP SGP2",170,162,8.18,7.43,0,{"$nulls":3},"UP GeneMark",41,133,7,370,"UP GeneMark",399,319,4.6,7.44,0,{"$nulls":3},"UP ExonHunter",33,112,4,658,"UP ExonHunter",241,168,5.96,4.09,0,{"$nulls":3},"UP GeneMark",39,127,12,373,"UP GeneMark",75,101,11.4,7.08,0,{"$nulls":3},"UP GeneMark",46,134,17,354,"UP GeneMark",140,151,9.77,8.35,0,{"$nulls":3},"UP GeneMark",39,135,13,364,"UP GeneMark",98,155,9.13,7.08,0,{"$nulls":3},"UP GeneMark",46,155,22,328,"UP GeneMark",74,187,9.96,8.35,0,{"$nulls":3},"UP SGP2",34,91,8,419,"UP SGP2",96,102,10.53,6.16,0,{"$nulls":3},"UP GeneMark",42,90,6,413,"UP GeneMark",26,43,20.9,7.62,0,{"$nulls":3},"UP SGP2",46,121,19,366,"UP SGP2",23,69,17.76,8.33,0]
["UP GeneMark",50,167,1,333,"UP GeneMark",667,807,2.96,9.07,0,{"$nulls":3},"UP SGP2",40,156,1,355,"UP SGP2",742,854,2.23,7.25,0,{"$nulls":3},"UP SGP2",40,150,3,359,"UP SGP2",662,778,2.45,7.25,0,{"$nulls":3},"UP ExonHunter",46,132,0,629,"UP ExonHunter",1902,1771,1.19,5.7,0,{"$nulls":3},"UP GeneMark",40,133,7,371,"UP GeneMark",174,154,7.98,7.26,0,{"$nulls":3},"UP ExonHunter",39,101,3,664,"UP ExonHunter",503,249,4.37,4.83,0,{"$nulls":3},"UP GeneMark",32,144,11,364,"UP GeneMark",190,188,5.78,5.81,0,{"$nulls":3},"UP SGP2",37,116,10,389,"UP SGP2",70,119,10.82,6.7,0,{"$nulls":3},"UP SGP2",41,129,12,370,"UP SGP2",140,161,8.7,7.43,0,{"$nulls":3},"UP SGP2",36,129,7,380,"UP SGP2",98,164,8.43,6.52,0,{"$nulls":3},"UP ExonHunter",45,125,8,629,"UP ExonHunter",93,199,9.74,5.58,0,{"$nulls":3},"UP GeneMark",30,97,6,418,"UP GeneMark",98,98,9.29,5.44,0,{"$nulls":3},"UP ExonHunter",41,71,5,690,"UP ExonHunter",40,49,20.4,5.08,0,{"$nulls":3},"UP ExonHunter",45,112,11,639,"UP ExonHunter",35,67,17.37,5.58,0]
["UP ExonHunter",45,130,2,630,"UP ExonHunter",765,751,2.66,5.58,0,{"$nulls":3},"UP ExonHunter",39,138,2,628,"UP ExonHunter",828,787,2.18,4.83,0,{"$nulls":3},"UP GeneZilla",39,175,4,259,"UP GeneZilla",676,740,2.39,8.18,0,{"$nulls":3},"UP SGP2",45,152,2,353,"UP SGP2",1822,1832,1.17,8.15,0,{"$nulls":3},"UP ExonHunter",39,103,2,663,"UP ExonHunter",212,147,7.78,4.83,0,{"$nulls":3},"UP GeneZilla",37,137,6,297,"UP GeneZilla",463,255,4.15,7.76,0,{"$nulls":3},"UP GeneZilla",30,153,7,287,"UP GeneZilla",209,162,5.42,6.29,0,{"$nulls":3},"UP ExonHunter",34,100,6,667,"UP ExonHunter",105,103,9.94,4.21,0,{"$nulls":3},"UP ExonHunter",40,112,7,648,"UP ExonHunter",172,147,8.49,4.96,0,{"$nulls":3},"UP GeneZilla",33,145,13,286,"UP GeneZilla",109,140,7.73,6.92,0,{"$nulls":3},"UP SGP2",42,148,9,353,"UP SGP2",62,210,9.09,7.61,0,{"$nulls":3},"UP ExonHunter",30,78,6,693,"UP ExonHunter",118,97,9.29,3.72,0,{"$nulls":3},"UP GeneZilla",39,99,10,329,"UP GeneZilla",24,39,19.4,8.18,0,{"$nulls":3},"UP GeneMark",43,133,25,350,"UP GeneMark",18,65,16.6,7.8,0]
["UP GeneZilla",41,171,4,261,"UP GeneZilla",707,772,2.42,8.6,0,{"$nulls":3},"UP GeneZilla",37,174,4,262,"UP GeneZilla",749,832,2.06,7.76,0,{"$nulls":3},"UP ExonHunter",38,138,1,630,"UP ExonHunter",746,708,2.33,4.71,0,{"$nulls":3},"UP GeneZilla",42,168,2,265,"UP GeneZilla",1812,1829,1.09,8.81,0,{"$nulls":3},"UP GeneZilla",34,140,9,294,"UP GeneZilla",187,140,6.79,7.13,0,{"$nulls":3},"UP SGP2",34,135,2,381,"UP SGP2",462,261,3.81,6.16,0,{"$nulls":3},"UP SGP2",27,144,5,376,"UP SGP2",197,186,4.87,4.89,0,{"$nulls":3},"UP GeneZilla",32,133,14,298,"UP GeneZilla",77,100,9.36,6.71,0,{"$nulls":3},"UP GeneZilla",34,148,12,283,"UP GeneZilla",141,148,7.22,7.13,0,{"$nulls":3},"UP ExonHunter",31,115,6,655,"UP ExonHunter",127,154,7.26,3.84,0,{"$nulls":3},"UP GeneZilla",37,160,18,262,"UP GeneZilla",76,189,8.01,7.76,0,{"$nulls":3},"UP GeneZilla",27,104,8,338,"UP GeneZilla",97,95,8.36,5.66,0,{"$nulls":3},"UP SGP2",38,88,9,417,"UP SGP2",23,52,18.91,6.88,0,{"$nulls":3},"UP GeneZilla",42,148,23,264,"UP GeneZilla",18,51,16.22,8.81,0]
["UP GeneID",39,121,0,107,"UP GeneID",739,792,2.31,14.61,0,{"$nulls":3},"*UP GenScan",35,138,1,221,"*UP GenScan",788,831,1.95,8.86,0,{"$nulls":3},"UP GeneID",34,131,0,102,"UP GeneID",699,766,2.09,12.73,0,{"$nulls":3},"*UP GenScan",39,144,1,211,"*UP GenScan",1811,1857,1.01,9.87,0,{"$nulls":3},"UP Dogfish",32,84,1,87,"UP Dogfish",173,212,6.39,15.69,0,{"$nulls":3},"UP GeneID",31,112,0,124,"UP GeneID",488,261,3.48,11.61,0,{"$nulls":3},"UP Dogfish",26,92,1,85,"UP Dogfish",184,252,4.69,12.75,0,{"$nulls":3},"*UP GenScan",29,107,3,256,"*UP GenScan",83,123,8.48,7.34,0,{"$nulls":3},"*UP GenScan",34,118,2,241,"*UP GenScan",147,172,7.22,8.61,0,{"$nulls":3},"UP GeneID",29,115,0,123,"UP GeneID",121,162,6.79,10.86,0,{"$nulls":3},"*UP GenScan",37,138,8,212,"*UP GenScan",78,209,8.01,9.37,0,{"$nulls":3},"UP Dogfish",27,59,0,118,"UP Dogfish",84,153,8.36,13.24,0,{"$nulls":3},"UP Dogfish",32,53,1,118,"UP Dogfish",32,84,15.92,15.69,0,{"$nulls":3},"UP Dogfish",37,80,5,82,"UP Dogfish",25,117,14.29,18.14,0]
["*UP GenScan",34,137,1,223,"*UP GenScan",738,782,2.01,8.61,0,{"$nulls":3},"UP GeneID",34,131,0,102,"UP GeneID",787,840,1.9,12.73,0,{"$nulls":3},"*UP GenScan",33,136,1,225,"*UP GenScan",703,758,2.02,8.35,0,{"$nulls":3},"UP GeneID",38,127,0,102,"UP GeneID",1832,1854,0.99,14.23,0,{"$nulls":3},"*UP GenScan",31,108,3,253,"*UP GenScan",193,169,6.19,7.85,0,{"$nulls":3},"UP Dogfish",30,80,3,91,"UP Dogfish",371,411,3.36,14.71,0,{"$nulls":3},"*UP GenScan",23,122,3,247,"*UP GenScan",209,200,4.15,5.82,0,{"$nulls":3},"UP GeneID",29,105,0,133,"UP GeneID",94,114,8.48,10.86,0,{"$nulls":3},"UP GeneID",33,111,0,123,"UP GeneID",162,165,7.01,12.36,0,{"$nulls":3},"UP Dogfish",28,86,4,86,"UP Dogfish",97,216,6.56,13.73,0,{"$nulls":3},"UP GeneID",33,118,1,115,"UP GeneID",83,228,7.14,12.36,0,{"$nulls":3},"*UP GenScan",26,89,3,277,"*UP GenScan",94,114,8.05,6.58,0,{"$nulls":3},"UP GeneID",27,81,0,159,"UP GeneID",35,58,13.43,10.11,0,{"$nulls":3},"*UP GenScan",36,116,8,235,"*UP GenScan",28,79,13.9,9.11,0]
["UP Dogfish",30,102,0,72,"UP Dogfish",594,965,1.77,14.71,0,{"$nulls":3},"UP Dogfish",29,98,1,76,"UP Dogfish",645,1020,1.62,14.22,0,{"$nulls":3},"UP Dogfish",28,100,1,75,"UP Dogfish",563,939,1.72,13.73,0,{"$nulls":3},"UP Dogfish",34,95,1,74,"UP Dogfish",1358,2364,0.88,16.67,0,{"$nulls":3},"UP GeneID",30,108,0,129,"UP GeneID",202,161,5.99,11.24,0,{"$nulls":3},"*UP GenScan",28,117,3,247,"*UP GenScan",487,260,3.14,7.09,0,{"$nulls":3},"UP GeneID",23,120,1,123,"UP GeneID",228,183,4.15,8.61,0,{"$nulls":3},"UP Dogfish",27,85,2,90,"UP Dogfish",72,158,7.89,13.24,0,{"$nulls":3},"UP Dogfish",30,86,4,84,"UP Dogfish",117,238,6.37,14.71,0,{"$nulls":3},"*UP GenScan",26,120,3,246,"*UP GenScan",114,167,6.09,6.58,0,{"$nulls":3},"UP Dogfish",30,85,4,85,"UP Dogfish",64,283,6.49,14.71,0,{"$nulls":3},"UP GeneID",24,88,0,155,"UP GeneID",104,107,7.43,8.99,0,{"$nulls":3},"*UP GenScan",27,77,3,288,"*UP GenScan",31,66,13.43,6.84,0,{"$nulls":3},"UP GeneID",33,119,5,110,"UP GeneID",38,69,12.74,12.36,0]
["UP Saga",18,118,2,193,"UP Saga",542,1013,1.06,5.44,0,{"$nulls":3},"UP Saga",17,120,1,193,"UP Saga",560,1095,0.95,5.14,0,{"$nulls":3},"UP Saga",17,114,3,197,"UP Saga",514,985,1.04,5.14,0,{"$nulls":3},"UP Saga",16,119,0,196,"UP Saga",1443,2273,0.42,4.83,0,{"$nulls":3},"UP Saga",15,93,8,215,"UP Saga",138,255,2.99,4.53,0,{"$nulls":3},"UP Saga",14,105,3,209,"UP Saga",382,391,1.57,4.23,0,{"$nulls":3},"UP Saga",12,106,5,208,"UP Saga",179,257,2.17,3.63,0,{"$nulls":3},"UP Saga",12,91,12,216,"UP Saga",58,181,3.51,3.63,0,{"$nulls":3},"UP Saga",14,94,12,211,"UP Saga",100,263,2.97,4.23,0,{"$nulls":3},"UP Saga",14,102,6,209,"UP Saga",85,226,3.28,4.23,0,{"$nulls":3},"UP Saga",18,95,11,207,"UP Saga",51,298,3.9,5.44,0,{"$nulls":3},"UP Saga",12,69,2,248,"UP Saga",73,169,3.72,3.63,0,{"$nulls":3},"UP Saga",17,67,5,242,"UP Saga",23,94,8.46,5.14,0,{"$nulls":3},"UP Saga",16,98,14,203,"UP Saga",15,130,6.18,4.83,0]
[]
[]
["There are 7881 unique introns among the 15437 introns in new gene",{"$nulls":13},"There are 7761 unique introns among the 14572 introns in new gene",{"$nulls":13},"There are 8104 unique introns among the 15021 introns in new gene",{"$nulls":13},"There are 7622 unique introns among the 13824 introns in new gene",{"$nulls":13},"There are 11089 unique introns among the 32496 introns in new gene",{"$nulls":13},"There are 10996 unique introns among the 29781 introns in new gene",{"$nulls":13},"There are 10441 unique introns among the 26116 introns in new gene",{"$nulls":13},"There are 11465 unique introns among the 36101 introns in new gene",{"$nulls":13},"There are 10729 unique introns among the 33467 introns in new gene",{"$nulls":13},"There are 10606 unique introns among the 32151 introns in new gene",{"$nulls":13},"There are 10333 unique introns among the 38619 introns in new gene",{"$nulls":13},"There are 13546 unique introns among the 53164 introns in new gene",{"$nulls":13},"There are 14985 unique introns among the 69955 introns in new gene",{"$nulls":13},"There are 11143 unique introns among the 42397 introns in new gene"]
[]
[]
[]
[]
["Analysis of the Start and Stop among CDS with the same intron structure as the reference",{"$nulls":153},"Analysis of the Start and Stop among CDS with the same intron structure as the reference",{"$nulls":13},"Analysis of the Start and Stop among CDS with the same intron structure as the reference"]
[]
["Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate",{"$nulls":146},"Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate",{"$nulls":6},"Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate"]
["Gencode",640,0,0,0,0,640,0,{"$nulls":146},"*MGC",307,0,0,0,0,307,0,{"$nulls":6},"*P CCDS",201,0,0,0,0,201,0]
["AceView",333,144,9,7,1,494,3.44,{"$nulls":146},"*ECgene",195,8,11,0,0,214,5.14,{"$nulls":6},"*Ensembl",145,1,0,0,0,146,0]
["*AceView",296,180,8,10,0,494,3.64,{"$nulls":146},"*KnownGene",189,5,2,0,0,196,1.02,{"$nulls":6},"Ensembl",143,1,2,0,0,146,1.37]
["*ECgene",406,25,8,6,1,446,3.36,{"$nulls":146},"*AceView",145,44,11,0,0,200,5.5,{"$nulls":6},"*RefSeq",144,0,0,0,0,144,0]
["*KnownGene",290,22,1,0,0,313,0.32,{"$nulls":146},"Pairagon",185,2,4,0,0,191,2.09,{"$nulls":6},"*KnownGene",139,3,0,0,0,142,0]
["*ExonWalk",225,52,18,7,1,303,8.58,{"$nulls":146},"AceView",156,30,13,0,0,199,6.53,{"$nulls":6},"*AceView",111,30,2,0,0,143,1.4]
["Exogean",258,8,18,6,5,295,9.83,{"$nulls":146},"Gencode",169,2,4,0,0,175,2.29,{"$nulls":6},"Gencode",140,1,0,0,0,141,0]
["*RefSeq",239,12,7,1,0,259,3.09,{"$nulls":146},"*RefSeq",147,0,3,0,0,150,2,{"$nulls":6},"*ECgene",138,2,3,0,0,143,2.1]
["Pairagon",232,12,4,3,0,251,2.79,{"$nulls":146},"*ExonWalk",130,13,13,0,0,156,8.33,{"$nulls":6},"Pairagon",137,1,2,0,0,140,1.43]
["*Ensembl",214,12,7,2,0,235,3.83,{"$nulls":146},"Exogean",130,4,12,0,0,146,8.22,{"$nulls":6},"AceView",116,21,3,0,0,140,2.14]
["Ensembl",214,10,8,3,0,235,4.68,{"$nulls":146},"*Ensembl",126,4,7,0,0,137,5.11,{"$nulls":6},"Fgenesh",135,1,5,0,0,141,3.55]
["*MGC",167,8,6,0,0,181,3.31,{"$nulls":146},"Ensembl",125,4,8,0,0,137,5.84,{"$nulls":6},"UP Jigsaw",132,1,5,0,0,138,3.62]
["Fgenesh",161,10,9,2,1,183,6.56,{"$nulls":146},"Fgenesh",108,1,4,0,0,113,3.54,{"$nulls":6},"*ExonWalk",107,12,4,0,0,123,3.25]
["*P CCDS",138,3,0,0,0,141,0,{"$nulls":146},"UP Jigsaw",91,1,6,0,0,98,6.12,{"$nulls":6},"Exogean",105,2,6,0,0,113,5.31]
["UP Jigsaw",127,4,2,1,0,134,2.24,{"$nulls":146},"*P CCDS",87,0,4,0,0,91,4.4,{"$nulls":6},"*MGC",91,0,5,0,0,96,5.21]
["*U NscanEst",83,12,6,1,0,102,6.86,{"$nulls":146},"UP Augustus",63,2,1,0,0,66,1.52,{"$nulls":6},"UP Augustus",85,2,1,0,0,88,1.14]
["UP Augustus",84,5,2,0,0,91,2.2,{"$nulls":146},"*U NscanEst",57,1,7,0,0,65,10.77,{"$nulls":6},"P Twinscan",62,7,4,0,0,73,5.48]
["P Twinscan",55,7,6,0,0,68,8.82,{"$nulls":146},"P Twinscan",42,4,2,0,0,48,4.17,{"$nulls":6},"*U NscanEst",64,1,6,0,0,71,8.45]
["UP GeneMark",32,3,3,4,0,42,16.67,{"$nulls":146},"UP SGP2",27,1,4,0,0,32,12.5,{"$nulls":6},"UP GeneMark",34,4,4,0,0,42,9.52]
["UP ExonHunter",32,2,5,1,0,40,15,{"$nulls":146},"UP GeneMark",21,4,2,0,0,27,7.41,{"$nulls":6},"UP SGP2",36,1,1,0,0,38,2.63]
["UP SGP2",33,0,6,0,0,39,15.38,{"$nulls":146},"UP ExonHunter",22,2,5,0,0,29,17.24,{"$nulls":6},"UP ExonHunter",34,2,5,0,0,41,12.2]
["UP GeneZilla",22,6,6,1,0,35,20,{"$nulls":146},"UP GeneZilla",22,1,3,0,0,26,11.54,{"$nulls":6},"UP GeneZilla",34,1,4,0,0,39,10.26]
["UP Dogfish",26,1,1,1,0,29,6.9,{"$nulls":146},"UP Dogfish",22,1,2,0,0,25,8,{"$nulls":6},"UP Dogfish",28,3,1,0,0,32,3.12]
["UP GeneID",22,4,5,0,0,31,16.13,{"$nulls":146},"*UP GenScan",20,0,4,0,0,24,16.67,{"$nulls":6},"UP GeneID",22,2,3,0,0,27,11.11]
["*UP GenScan",24,1,4,0,0,29,13.79,{"$nulls":146},"UP GeneID",19,1,3,0,0,23,13.04,{"$nulls":6},"*UP GenScan",23,0,4,0,0,27,14.81]
["UP Saga",10,2,3,1,0,16,25,{"$nulls":146},"UP Saga",8,0,4,0,0,12,33.33,{"$nulls":6},"UP Saga",12,0,5,0,0,17,29.41]
[]
["Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron"]
["Program","Intronless transcript also found in Gencode","New intronless transcript in Gencode gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *AceView","New intronless transcript in *AceView gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in AceView","New intronless transcript in AceView gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *ECgene","New intronless transcript in *ECgene gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *KnownGene","New intronless transcript in *KnownGene gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *ExonWalk","New intronless transcript in *ExonWalk gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Exogean","New intronless transcript in Exogean gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *RefSeq","New intronless transcript in *RefSeq gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Pairagon","New intronless transcript in Pairagon gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *Ensembl","New intronless transcript in *Ensembl gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Fgenesh","New intronless transcript in Fgenesh gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *MGC","New intronless transcript in *MGC gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *P CCDS","New intronless transcript in *P CCDS gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in UP Jigsaw","New intronless transcript in UP Jigsaw gene","New intronless transcript in new gene"]
["Gencode",70,0,0,{"$nulls":10},"*AceView",902,0,0,{"$nulls":10},"AceView",24,0,0,{"$nulls":10},"*ECgene",2569,0,0,{"$nulls":10},"*KnownGene",53,0,0,{"$nulls":10},"*ExonWalk",3,0,0,{"$nulls":10},"Exogean",2,0,0,{"$nulls":10},"*RefSeq",41,0,0,{"$nulls":10},"Pairagon",38,0,0,{"$nulls":10},"*Ensembl",58,0,0,{"$nulls":10},"Fgenesh",97,0,0,{"$nulls":10},"*MGC",19,0,0,{"$nulls":10},"*P CCDS",14,0,0,{"$nulls":10},"UP Jigsaw",67,0,0]
["*ECgene",59,546,1964,{"$nulls":10},"*ECgene",609,305,1655,{"$nulls":10},"*ECgene",24,468,2077,{"$nulls":10},"*AceView",614,130,158,{"$nulls":10},"*AceView",44,258,600,{"$nulls":10},"*ECgene",3,382,2184,{"$nulls":10},"*ECgene",2,377,2190,{"$nulls":10},"*AceView",39,255,608,{"$nulls":10},"P Twinscan",26,41,41,{"$nulls":10},"Ensembl",56,0,0,{"$nulls":10},"UP Augustus",54,19,14,{"$nulls":10},"*ECgene",15,277,2277,{"$nulls":10},"UP Jigsaw",14,1,52,{"$nulls":10},"UP Augustus",51,9,27]
["*AceView",56,337,509,{"$nulls":10},"Gencode",56,7,7,{"$nulls":10},"*AceView",22,326,554,{"$nulls":10},"Gencode",58,6,6,{"$nulls":10},"*ECgene",43,399,2127,{"$nulls":10},"*AceView",3,252,647,{"$nulls":10},"Fgenesh",2,21,74,{"$nulls":10},"Gencode",37,13,20,{"$nulls":10},"*ECgene",25,385,2159,{"$nulls":10},"UP Jigsaw",42,17,8,{"$nulls":10},"*ECgene",52,362,2155,{"$nulls":10},"*AceView",11,174,717,{"$nulls":10},"P Twinscan",11,11,86,{"$nulls":10},"*ECgene",46,334,2189]
["UP Jigsaw",41,12,14,{"$nulls":10},"*KnownGene",45,7,1,{"$nulls":10},"P Twinscan",10,25,73,{"$nulls":10},"Fgenesh",52,11,34,{"$nulls":10},"Gencode",40,5,25,{"$nulls":10},"UP ExonHunter",3,20,197,{"$nulls":10},"*AceView",1,270,631,{"$nulls":10},"*KnownGene",37,10,6,{"$nulls":10},"*AceView",25,273,604,{"$nulls":10},"*ECgene",39,368,2162,{"$nulls":10},"P Twinscan",52,33,23,{"$nulls":10},"UP Jigsaw",11,6,50,{"$nulls":10},"UP Augustus",11,5,71,{"$nulls":10},"Fgenesh",44,6,47]
["*KnownGene",40,9,4,{"$nulls":10},"Fgenesh",42,12,43,{"$nulls":10},"*KnownGene",9,12,32,{"$nulls":10},"P Twinscan",48,26,34,{"$nulls":10},"UP Jigsaw",39,12,16,{"$nulls":10},"UP SGP2",3,14,142,{"$nulls":10},"P Twinscan",1,34,73,{"$nulls":10},"*ECgene",36,381,2152,{"$nulls":10},"Gencode",24,18,28,{"$nulls":10},"UP Augustus",37,24,26,{"$nulls":10},"UP Jigsaw",44,13,10,{"$nulls":10},"*KnownGene",11,3,39,{"$nulls":10},"UP GeneZilla",9,4,166,{"$nulls":10},"P Twinscan",42,22,44]
["UP Augustus",38,16,33,{"$nulls":10},"P Twinscan",41,25,42,{"$nulls":10},"UP Jigsaw",8,14,45,{"$nulls":10},"UP Jigsaw",48,14,5,{"$nulls":10},"UP Augustus",37,15,35,{"$nulls":10},"UP Augustus",2,12,73,{"$nulls":10},"UP Augustus",1,31,55,{"$nulls":10},"UP Jigsaw",35,16,16,{"$nulls":10},"*RefSeq",24,11,6,{"$nulls":10},"Fgenesh",36,14,47,{"$nulls":10},"*AceView",42,258,602,{"$nulls":10},"*Ensembl",11,1,46,{"$nulls":10},"Fgenesh",9,0,88,{"$nulls":10},"*Ensembl",42,1,15]
["Fgenesh",37,15,45,{"$nulls":10},"UP Augustus",40,16,31,{"$nulls":10},"Fgenesh",8,12,77,{"$nulls":10},"UP ExonHunter",47,26,147,{"$nulls":10},"*RefSeq",37,0,4,{"$nulls":10},"UP GeneZilla",2,12,165,{"$nulls":10},"UP Jigsaw",1,21,45,{"$nulls":10},"UP Augustus",34,17,36,{"$nulls":10},"Fgenesh",23,26,48,{"$nulls":10},"Gencode",34,10,26,{"$nulls":10},"UP ExonHunter",42,9,169,{"$nulls":10},"Gencode",10,3,57,{"$nulls":10},"*ECgene",8,222,2339,{"$nulls":10},"Ensembl",41,1,14]
["*RefSeq",37,2,2,{"$nulls":10},"UP Jigsaw",40,13,14,{"$nulls":10},"Gencode",8,11,51,{"$nulls":10},"UP Augustus",47,18,22,{"$nulls":10},"Fgenesh",35,10,52,{"$nulls":10},"Gencode",2,5,63,{"$nulls":10},"UP GeneZilla",1,21,157,{"$nulls":10},"Fgenesh",34,12,51,{"$nulls":10},"UP Augustus",22,32,33,{"$nulls":10},"*AceView",32,261,609,{"$nulls":10},"UP GeneZilla",39,19,121,{"$nulls":10},"Ensembl",10,1,45,{"$nulls":10},"*AceView",8,158,736,{"$nulls":10},"*AceView",40,249,613]
["P Twinscan",35,31,42,{"$nulls":10},"*RefSeq",40,1,0,{"$nulls":10},"*RefSeq",8,3,30,{"$nulls":10},"UP SGP2",45,19,95,{"$nulls":10},"*Ensembl",33,8,17,{"$nulls":10},"UP GeneMark",2,4,75,{"$nulls":10},"Gencode",1,16,53,{"$nulls":10},"P Twinscan",32,28,48,{"$nulls":10},"*KnownGene",22,18,13,{"$nulls":10},"*KnownGene",32,11,10,{"$nulls":10},"Gencode",37,7,26,{"$nulls":10},"*RefSeq",10,0,31,{"$nulls":10},"UP ExonHunter",8,1,211,{"$nulls":10},"Gencode",40,6,24]
["*Ensembl",35,7,16,{"$nulls":10},"UP GeneZilla",35,12,132,{"$nulls":10},"*Ensembl",7,10,41,{"$nulls":10},"*KnownGene",44,5,4,{"$nulls":10},"P Twinscan",31,27,50,{"$nulls":10},"Ensembl",2,3,51,{"$nulls":10},"*KnownGene",1,15,37,{"$nulls":10},"*Ensembl",29,9,20,{"$nulls":10},"UP Jigsaw",21,23,23,{"$nulls":10},"P Twinscan",31,35,42,{"$nulls":10},"*Ensembl",36,4,18,{"$nulls":10},"UP Augustus",7,13,67,{"$nulls":10},"*Ensembl",8,0,50,{"$nulls":10},"*KnownGene",38,7,8]
["Ensembl",33,7,16,{"$nulls":10},"UP ExonHunter",34,18,168,{"$nulls":10},"*MGC",7,9,3,{"$nulls":10},"UP GeneZilla",42,14,123,{"$nulls":10},"Ensembl",31,8,17,{"$nulls":10},"*Ensembl",2,3,53,{"$nulls":10},"*Ensembl",1,13,44,{"$nulls":10},"Ensembl",27,9,20,{"$nulls":10},"*U NscanEst",19,2,6,{"$nulls":10},"*RefSeq",29,5,7,{"$nulls":10},"Ensembl",35,4,17,{"$nulls":10},"AceView",7,5,12,{"$nulls":10},"Ensembl",7,0,49,{"$nulls":10},"UP GeneZilla",37,6,136]
["UP ExonHunter",30,27,163,{"$nulls":10},"*Ensembl",32,11,15,{"$nulls":10},"UP GeneMark",7,8,66,{"$nulls":10},"*Ensembl",40,5,13,{"$nulls":10},"UP GeneZilla",25,15,139,{"$nulls":10},"*KnownGene",2,2,49,{"$nulls":10},"AceView",1,11,12,{"$nulls":10},"UP GeneZilla",24,16,139,{"$nulls":10},"*Ensembl",18,13,27,{"$nulls":10},"UP GeneZilla",24,20,135,{"$nulls":10},"*KnownGene",34,4,15,{"$nulls":10},"Fgenesh",7,5,85,{"$nulls":10},"Gencode",6,3,61,{"$nulls":10},"*RefSeq",35,1,5]
["UP GeneZilla",30,12,137,{"$nulls":10},"Ensembl",30,11,15,{"$nulls":10},"UP Augustus",6,17,64,{"$nulls":10},"Ensembl",37,6,13,{"$nulls":10},"UP ExonHunter",24,27,169,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"*RefSeq",1,10,30,{"$nulls":10},"Pairagon",24,2,12,{"$nulls":10},"UP ExonHunter",17,20,183,{"$nulls":10},"UP ExonHunter",22,17,181,{"$nulls":10},"*UP GenScan",33,3,23,{"$nulls":10},"P Twinscan",6,16,86,{"$nulls":10},"*MGC",6,0,13,{"$nulls":10},"UP ExonHunter",34,3,183]
["UP SGP2",26,18,115,{"$nulls":10},"UP SGP2",28,12,119,{"$nulls":10},"UP GeneZilla",6,14,159,{"$nulls":10},"*RefSeq",36,2,3,{"$nulls":10},"Pairagon",23,1,14,{"$nulls":10},"UP Saga",2,2,43,{"$nulls":10},"Pairagon",1,7,30,{"$nulls":10},"*UP GenScan",23,2,34,{"$nulls":10},"UP GeneZilla",17,20,142,{"$nulls":10},"UP GeneMark",20,11,50,{"$nulls":10},"*RefSeq",33,2,6,{"$nulls":10},"*P CCDS",6,5,3,{"$nulls":10},"AceView",5,6,13,{"$nulls":10},"UP SGP2",28,6,125]
["*UP GenScan",26,3,30,{"$nulls":10},"Pairagon",25,4,9,{"$nulls":10},"Ensembl",6,10,40,{"$nulls":10},"*UP GenScan",30,3,26,{"$nulls":10},"*UP GenScan",22,2,35,{"$nulls":10},"P Twinscan",1,21,86,{"$nulls":10},"*P CCDS",1,6,7,{"$nulls":10},"UP ExonHunter",22,15,183,{"$nulls":10},"UP SGP2",17,14,128,{"$nulls":10},"UP SGP2",18,18,123,{"$nulls":10},"UP GeneMark",32,10,39,{"$nulls":10},"UP GeneZilla",5,6,168,{"$nulls":10},"*KnownGene",5,2,46,{"$nulls":10},"*UP GenScan",25,2,32]
["Pairagon",25,3,10,{"$nulls":10},"UP GeneMark",24,5,52,{"$nulls":10},"*P CCDS",5,7,2,{"$nulls":10},"UP GeneMark",29,5,47,{"$nulls":10},"UP GeneMark",21,5,55,{"$nulls":10},"UP Jigsaw",1,8,58,{"$nulls":10},"*U NscanEst",1,6,20,{"$nulls":10},"UP GeneMark",20,5,56,{"$nulls":10},"Ensembl",16,13,27,{"$nulls":10},"Pairagon",18,5,15,{"$nulls":10},"UP SGP2",30,12,117,{"$nulls":10},"Pairagon",5,0,33,{"$nulls":10},"UP GeneMark",5,1,75,{"$nulls":10},"UP GeneMark",24,3,54]
["UP GeneMark",23,5,53,{"$nulls":10},"*UP GenScan",24,5,30,{"$nulls":10},"UP SGP2",4,11,144,{"$nulls":10},"Pairagon",25,5,8,{"$nulls":10},"UP SGP2",20,19,120,{"$nulls":10},"Fgenesh",1,6,90,{"$nulls":10},"*MGC",1,2,16,{"$nulls":10},"UP SGP2",19,12,128,{"$nulls":10},"UP GeneMark",13,16,52,{"$nulls":10},"*UP GenScan",17,7,35,{"$nulls":10},"Pairagon",23,2,13,{"$nulls":10},"UP ExonHunter",4,8,208,{"$nulls":10},"*RefSeq",4,0,37,{"$nulls":10},"Pairagon",21,1,16]
["*MGC",10,6,3,{"$nulls":10},"AceView",22,1,1,{"$nulls":10},"*UP GenScan",4,6,49,{"$nulls":10},"AceView",23,1,0,{"$nulls":10},"*MGC",11,5,3,{"$nulls":10},"*P CCDS",1,6,7,{"$nulls":10},"UP ExonHunter",0,26,194,{"$nulls":10},"*MGC",10,8,1,{"$nulls":10},"*UP GenScan",13,10,36,{"$nulls":10},"*MGC",11,4,4,{"$nulls":10},"UP GeneID",20,10,21,{"$nulls":10},"UP GeneMark",4,5,72,{"$nulls":10},"*U NscanEst",4,0,23,{"$nulls":10},"UP GeneID",14,5,32]
["*U NscanEst",10,6,11,{"$nulls":10},"*MGC",12,7,0,{"$nulls":10},"Pairagon",4,4,30,{"$nulls":10},"UP GeneID",17,8,26,{"$nulls":10},"AceView",9,8,7,{"$nulls":10},"UP GeneID",1,5,45,{"$nulls":10},"UP SGP2",0,18,141,{"$nulls":10},"AceView",8,9,7,{"$nulls":10},"*MGC",5,10,4,{"$nulls":10},"UP GeneID",9,10,32,{"$nulls":10},"*U NscanEst",13,2,12,{"$nulls":10},"UP GeneID",3,3,45,{"$nulls":10},"UP GeneID",3,3,45,{"$nulls":10},"*P CCDS",14,0,0]
["AceView",8,12,4,{"$nulls":10},"*U NscanEst",11,6,10,{"$nulls":10},"UP ExonHunter",3,18,199,{"$nulls":10},"*MGC",16,3,0,{"$nulls":10},"*U NscanEst",9,3,15,{"$nulls":10},"*UP GenScan",1,1,57,{"$nulls":10},"UP GeneMark",0,16,65,{"$nulls":10},"UP GeneID",8,5,38,{"$nulls":10},"AceView",4,16,4,{"$nulls":10},"*P CCDS",8,6,0,{"$nulls":10},"*P CCDS",9,3,2,{"$nulls":10},"*U NscanEst",3,1,23,{"$nulls":10},"UP SGP2",3,1,155,{"$nulls":10},"*MGC",11,2,6]
["UP GeneID",8,6,37,{"$nulls":10},"UP GeneID",8,7,36,{"$nulls":10},"*U NscanEst",3,7,17,{"$nulls":10},"*U NscanEst",14,7,6,{"$nulls":10},"UP GeneID",7,6,38,{"$nulls":10},"*RefSeq",1,0,40,{"$nulls":10},"*UP GenScan",0,16,43,{"$nulls":10},"*U NscanEst",8,4,15,{"$nulls":10},"UP GeneID",4,11,36,{"$nulls":10},"AceView",7,11,6,{"$nulls":10},"AceView",8,11,5,{"$nulls":10},"*UP GenScan",3,1,55,{"$nulls":10},"Pairagon",3,0,35,{"$nulls":10},"*U NscanEst",10,1,16]
["*P CCDS",7,7,0,{"$nulls":10},"*P CCDS",8,5,1,{"$nulls":10},"UP GeneID",2,7,42,{"$nulls":10},"*P CCDS",10,4,0,{"$nulls":10},"*P CCDS",6,8,0,{"$nulls":10},"AceView",0,10,14,{"$nulls":10},"Ensembl",0,13,43,{"$nulls":10},"*P CCDS",4,10,0,{"$nulls":10},"*P CCDS",3,11,0,{"$nulls":10},"*U NscanEst",6,7,14,{"$nulls":10},"*MGC",7,3,9,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"*UP GenScan",3,0,56,{"$nulls":10},"AceView",8,10,6]
["UP Saga",6,4,37,{"$nulls":10},"UP Saga",6,3,38,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"UP Saga",9,4,34,{"$nulls":10},"UP Saga",3,4,40,{"$nulls":10},"*U NscanEst",0,2,25,{"$nulls":10},"UP GeneID",0,11,40,{"$nulls":10},"UP Saga",3,3,41,{"$nulls":10},"UP Saga",2,4,41,{"$nulls":10},"UP Saga",2,5,40,{"$nulls":10},"UP Saga",4,4,39,{"$nulls":10},"UP SGP2",0,4,155,{"$nulls":10},"UP Saga",2,0,45,{"$nulls":10},"UP Saga",5,2,40]
["UP Dogfish",3,2,10,{"$nulls":10},"UP Dogfish",4,2,9,{"$nulls":10},"UP Saga",0,5,42,{"$nulls":10},"UP Dogfish",4,2,9,{"$nulls":10},"UP Dogfish",3,2,10,{"$nulls":10},"*MGC",0,1,18,{"$nulls":10},"UP Saga",0,5,42,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",1,3,11,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"UP Dogfish",1,2,12]
["*ExonWalk",2,1,0,{"$nulls":10},"*ExonWalk",3,0,0,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"*ExonWalk",3,0,0,{"$nulls":10},"*ExonWalk",2,1,0,{"$nulls":10},"Exogean",0,0,2,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"*ExonWalk",1,0,2,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"Exogean",2,0,0,{"$nulls":10},"UP Saga",0,2,45,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"Exogean",1,0,1]
["Exogean",1,0,1,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"*ExonWalk",0,1,2,{"$nulls":10},"Exogean",2,0,0,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"Pairagon",0,0,38,{"$nulls":10},"*ExonWalk",0,0,3,{"$nulls":10},"Exogean",1,0,1,{"$nulls":10},"*ExonWalk",0,1,2,{"$nulls":10},"*ExonWalk",1,0,2,{"$nulls":10},"*ExonWalk",1,0,2,{"$nulls":10},"*ExonWalk",0,0,3,{"$nulls":10},"*ExonWalk",0,0,3,{"$nulls":10},"*ExonWalk",0,1,2]
[]
["Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns"]
["Program","Correct intron in transcript exact or similar to Gencode","Different intron in transcript exact or similar to Gencode","Intron in additional variant","Intron in new gene","Missed intron in touched Gencode gene","Missed intron in missed Gencode gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *AceView","Different intron in transcript exact or similar to *AceView","Intron in additional variant","Intron in new gene","Missed intron in touched *AceView gene","Missed intron in missed *AceView gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to AceView","Different intron in transcript exact or similar to AceView","Intron in additional variant","Intron in new gene","Missed intron in touched AceView gene","Missed intron in missed AceView gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *ECgene","Different intron in transcript exact or similar to *ECgene","Intron in additional variant","Intron in new gene","Missed intron in touched *ECgene gene","Missed intron in missed *ECgene gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *KnownGene","Different intron in transcript exact or similar to *KnownGene","Intron in additional variant","Intron in new gene","Missed intron in touched *KnownGene gene","Missed intron in missed *KnownGene gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *ExonWalk","Different intron in transcript exact or similar to *ExonWalk","Intron in additional variant","Intron in new gene","Missed intron in touched *ExonWalk gene","Missed intron in missed *ExonWalk gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Exogean","Different intron in transcript exact or similar to Exogean","Intron in additional variant","Intron in new gene","Missed intron in touched Exogean gene","Missed intron in missed Exogean gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *RefSeq","Different intron in transcript exact or similar to *RefSeq","Intron in additional variant","Intron in new gene","Missed intron in touched *RefSeq gene","Missed intron in missed *RefSeq gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Pairagon","Different intron in transcript exact or similar to Pairagon","Intron in additional variant","Intron in new gene","Missed intron in touched Pairagon gene","Missed intron in missed Pairagon gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *Ensembl","Different intron in transcript exact or similar to *Ensembl","Intron in additional variant","Intron in new gene","Missed intron in touched *Ensembl gene","Missed intron in missed *Ensembl gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Fgenesh","Different intron in transcript exact or similar to Fgenesh","Intron in additional variant","Intron in new gene","Missed intron in touched Fgenesh gene","Missed intron in missed Fgenesh gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *MGC","Different intron in transcript exact or similar to *MGC","Intron in additional variant","Intron in new gene","Missed intron in touched *MGC gene","Missed intron in missed *MGC gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *P CCDS","Different intron in transcript exact or similar to *P CCDS","Intron in additional variant","Intron in new gene","Missed intron in touched *P CCDS gene","Missed intron in missed *P CCDS gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to UP Jigsaw","Different intron in transcript exact or similar to UP Jigsaw","Intron in additional variant","Intron in new gene","Missed intron in touched UP Jigsaw gene","Missed intron in missed UP Jigsaw gene"]
["Gencode",9693,0,0,0,0,0,{"$nulls":7},"*AceView",9792,0,0,0,0,0,{"$nulls":7},"AceView",9597,0,0,0,0,0,{"$nulls":7},"*ECgene",30660,0,0,0,0,0,{"$nulls":7},"*KnownGene",4427,0,0,0,0,0,{"$nulls":7},"*ExonWalk",8057,0,0,0,0,0,{"$nulls":7},"Exogean",6178,0,0,0,0,0,{"$nulls":7},"*RefSeq",2922,0,0,0,0,0,{"$nulls":7},"Pairagon",3470,0,0,0,0,0,{"$nulls":7},"*Ensembl",3548,0,0,0,0,0,{"$nulls":7},"Fgenesh",3241,0,0,0,0,0,{"$nulls":7},"*MGC",2101,0,0,0,0,0,{"$nulls":7},"*P CCDS",1508,0,0,0,0,0,{"$nulls":7},"UP Jigsaw",2168,0,0,0,0,0]
["*AceView",7470,766,946,610,1920,303,{"$nulls":7},"AceView",8145,556,588,308,1231,416,{"$nulls":7},"*AceView",8145,466,753,428,1261,191,{"$nulls":7},"*AceView",7553,1165,460,614,22477,630,{"$nulls":7},"*AceView",3793,235,3588,2176,598,36,{"$nulls":7},"*ECgene",6079,1185,17310,6086,1838,140,{"$nulls":7},"Gencode",4539,366,3109,1679,1434,205,{"$nulls":7},"*AceView",2776,73,4415,2528,135,11,{"$nulls":7},"*ECgene",2860,299,19419,8082,531,79,{"$nulls":7},"Ensembl",3548,0,0,0,0,0,{"$nulls":7},"*AceView",1991,409,4240,3152,809,441,{"$nulls":7},"*ECgene",1793,207,17130,11530,304,4,{"$nulls":7},"Gencode",1319,84,2859,5431,74,115,{"$nulls":7},"*ECgene",1553,304,16743,12060,540,75]
["AceView",7401,763,856,577,1780,512,{"$nulls":7},"*ECgene",7553,2319,19277,1511,1989,250,{"$nulls":7},"Gencode",7401,498,1274,520,1620,576,{"$nulls":7},"Gencode",7368,1088,636,601,21146,2146,{"$nulls":7},"*ECgene",3732,383,18477,8068,681,14,{"$nulls":7},"Gencode",4064,836,2544,2249,3468,525,{"$nulls":7},"*AceView",4490,347,3112,1843,1567,121,{"$nulls":7},"*ECgene",2655,184,19352,8469,264,3,{"$nulls":7},"*AceView",2787,263,4120,2622,566,117,{"$nulls":7},"Gencode",2642,318,4438,2295,475,431,{"$nulls":7},"*ECgene",1989,461,18354,9856,819,433,{"$nulls":7},"Gencode",1688,148,4018,3839,354,59,{"$nulls":7},"AceView",1272,108,2751,5466,93,143,{"$nulls":7},"Gencode",1540,242,4585,3326,315,313]
["*ECgene",7368,2294,18841,2157,2074,251,{"$nulls":7},"Gencode",7470,631,1075,517,1716,606,{"$nulls":7},"*ECgene",7367,2115,19167,2011,2033,197,{"$nulls":7},"AceView",7367,1115,482,633,21324,1969,{"$nulls":7},"Gencode",3725,229,3604,2135,583,119,{"$nulls":7},"AceView",4049,924,2298,2326,3475,533,{"$nulls":7},"AceView",4485,338,2896,1878,1510,183,{"$nulls":7},"Gencode",2643,142,4381,2527,225,54,{"$nulls":7},"Gencode",2713,382,4067,2531,583,174,{"$nulls":7},"*AceView",2641,352,4394,2405,769,138,{"$nulls":7},"Gencode",1988,408,4051,3246,537,716,{"$nulls":7},"*AceView",1669,184,4195,3744,408,24,{"$nulls":7},"Ensembl",1268,49,405,1826,11,229,{"$nulls":7},"AceView",1493,292,4452,3360,368,307]
["Exogean",4539,1356,75,208,3475,1679,{"$nulls":7},"Exogean",4490,1387,121,180,3459,1843,{"$nulls":7},"Exogean",4485,1361,146,186,3234,1878,{"$nulls":7},"*ExonWalk",6079,1273,237,468,18497,6084,{"$nulls":7},"AceView",3710,298,3255,2334,633,84,{"$nulls":7},"*AceView",4009,966,2454,2363,3875,173,{"$nulls":7},"*ECgene",4355,652,20217,5436,1769,54,{"$nulls":7},"*KnownGene",2635,51,1359,382,185,102,{"$nulls":7},"AceView",2653,361,3860,2723,599,218,{"$nulls":7},"AceView",2601,351,4058,2587,568,379,{"$nulls":7},"AceView",1927,401,4030,3239,552,762,{"$nulls":7},"AceView",1654,183,3958,3802,351,96,{"$nulls":7},"*Ensembl",1268,49,405,1826,11,229,{"$nulls":7},"Exogean",1473,487,2770,1448,235,460]
["*ExonWalk",4064,1341,2127,525,3381,2248,{"$nulls":7},"*ExonWalk",4009,1459,2067,522,3422,2361,{"$nulls":7},"*ExonWalk",4049,1330,2145,533,3223,2325,{"$nulls":7},"Exogean",4355,1437,143,243,20871,5434,{"$nulls":7},"Exogean",3287,1008,1208,675,900,240,{"$nulls":7},"Exogean",3121,1416,823,818,4007,929,{"$nulls":7},"*KnownGene",3287,347,553,240,2223,668,{"$nulls":7},"AceView",2620,179,4179,2619,267,35,{"$nulls":7},"*KnownGene",2459,169,1188,611,593,418,{"$nulls":7},"*ECgene",2596,485,18760,8819,881,71,{"$nulls":7},"*RefSeq",1872,326,190,534,294,1075,{"$nulls":7},"*KnownGene",1582,88,1691,1066,437,82,{"$nulls":7},"*AceView",1262,99,2973,5458,194,52,{"$nulls":7},"*AceView",1471,254,4603,3464,573,124]
["*KnownGene",3725,425,157,120,3849,2119,{"$nulls":7},"*KnownGene",3793,373,196,65,3841,2158,{"$nulls":7},"*KnownGene",3710,399,233,85,3566,2321,{"$nulls":7},"*KnownGene",3732,467,98,130,18951,7977,{"$nulls":7},"*ExonWalk",2659,425,3646,1327,1224,544,{"$nulls":7},"*KnownGene",2659,550,674,544,4071,1327,{"$nulls":7},"*ExonWalk",3121,506,3501,929,2239,818,{"$nulls":7},"Exogean",2450,482,2258,988,327,145,{"$nulls":7},"Exogean",2415,832,1951,980,676,379,{"$nulls":7},"Exogean",2404,837,1880,1057,488,656,{"$nulls":7},"*KnownGene",1864,333,1296,934,347,1030,{"$nulls":7},"Exogean",1454,566,2223,1935,503,144,{"$nulls":7},"*RefSeq",1258,60,277,1327,4,246,{"$nulls":7},"Pairagon",1381,237,1008,844,278,509]
["Pairagon",2713,461,99,197,4465,2515,{"$nulls":7},"Pairagon",2787,387,62,234,4396,2609,{"$nulls":7},"Pairagon",2653,463,128,226,4233,2711,{"$nulls":7},"Pairagon",2860,326,47,237,19744,8056,{"$nulls":7},"*RefSeq",2635,75,110,102,1410,382,{"$nulls":7},"Pairagon",2083,517,381,489,4454,1520,{"$nulls":7},"*RefSeq",2450,200,127,145,2747,981,{"$nulls":7},"Pairagon",2395,55,561,459,337,190,{"$nulls":7},"*RefSeq",2395,110,224,193,643,432,{"$nulls":7},"*KnownGene",2294,352,1292,489,538,716,{"$nulls":7},"Exogean",1833,785,2271,1289,507,901,{"$nulls":7},"Pairagon",1435,239,790,1006,432,234,{"$nulls":7},"*ECgene",1251,118,11263,18028,222,35,{"$nulls":7},"*KnownGene",1368,184,1788,1087,169,631]
["*RefSeq",2643,190,34,55,4531,2519,{"$nulls":7},"*RefSeq",2776,108,17,21,4494,2522,{"$nulls":7},"*RefSeq",2620,196,70,36,4364,2613,{"$nulls":7},"*RefSeq",2655,199,16,52,19577,8428,{"$nulls":7},"Pairagon",2459,133,433,445,1361,607,{"$nulls":7},"Ensembl",2067,533,211,737,4735,1255,{"$nulls":7},"Pairagon",2415,303,373,379,2790,973,{"$nulls":7},"Ensembl",2100,189,403,856,566,256,{"$nulls":7},"*ExonWalk",2083,358,4096,1520,899,488,{"$nulls":7},"*RefSeq",2100,234,326,262,598,850,{"$nulls":7},"Pairagon",1802,325,737,606,559,880,{"$nulls":7},"*ExonWalk",1361,200,4148,2348,501,239,{"$nulls":7},"*KnownGene",1247,64,1128,1988,18,243,{"$nulls":7},"Fgenesh",1356,334,501,1050,386,426]
["Ensembl",2642,413,56,437,4771,2280,{"$nulls":7},"Ensembl",2641,431,73,403,4762,2389,{"$nulls":7},"Ensembl",2601,479,88,380,4425,2571,{"$nulls":7},"Ensembl",2596,531,89,332,19317,8747,{"$nulls":7},"Ensembl",2294,400,132,722,1659,474,{"$nulls":7},"*Ensembl",2067,533,211,737,4735,1255,{"$nulls":7},"Ensembl",2404,383,105,656,2728,1046,{"$nulls":7},"*Ensembl",2100,189,403,856,566,256,{"$nulls":7},"Ensembl",2050,317,307,874,1052,368,{"$nulls":7},"*ExonWalk",2067,360,4374,1256,744,737,{"$nulls":7},"*ExonWalk",1626,344,4152,1935,649,966,{"$nulls":7},"*RefSeq",1256,264,602,800,660,185,{"$nulls":7},"Exogean",1198,263,1516,3201,54,256,{"$nulls":7},"Ensembl",1345,299,831,1073,372,451]
["*Ensembl",2642,413,56,437,4771,2280,{"$nulls":7},"*Ensembl",2641,431,73,403,4762,2389,{"$nulls":7},"*Ensembl",2601,479,88,380,4425,2571,{"$nulls":7},"*Ensembl",2596,531,89,332,19323,8741,{"$nulls":7},"*Ensembl",2294,400,132,722,1659,474,{"$nulls":7},"*RefSeq",2016,409,199,298,4612,1429,{"$nulls":7},"*Ensembl",2404,383,105,656,2728,1046,{"$nulls":7},"*ExonWalk",2016,232,4380,1429,608,298,{"$nulls":7},"*Ensembl",2050,317,307,874,1052,368,{"$nulls":7},"Pairagon",2050,312,708,400,631,867,{"$nulls":7},"Ensembl",1600,438,509,1001,748,893,{"$nulls":7},"Ensembl",1210,342,548,1448,667,224,{"$nulls":7},"Pairagon",1188,81,671,1530,96,224,{"$nulls":7},"*Ensembl",1345,299,831,1073,372,451]
["Fgenesh",1988,518,14,721,4511,3194,{"$nulls":7},"Fgenesh",1991,479,17,754,4719,3082,{"$nulls":7},"Fgenesh",1927,507,40,767,4513,3157,{"$nulls":7},"Fgenesh",1989,460,3,789,18906,9765,{"$nulls":7},"Fgenesh",1864,280,65,1032,1646,917,{"$nulls":7},"Fgenesh",1626,510,139,966,4508,1923,{"$nulls":7},"Fgenesh",1833,402,105,901,3081,1264,{"$nulls":7},"Fgenesh",1872,281,10,1078,538,512,{"$nulls":7},"Fgenesh",1802,359,198,882,1094,574,{"$nulls":7},"Fgenesh",1600,511,232,898,963,985,{"$nulls":7},"*Ensembl",1600,438,509,1001,748,893,{"$nulls":7},"*Ensembl",1210,342,548,1448,667,224,{"$nulls":7},"Fgenesh",1133,132,225,1751,145,230,{"$nulls":7},"*ExonWalk",1338,117,4446,2156,257,573]
["*MGC",1688,228,126,59,4172,3833,{"$nulls":7},"*MGC",1669,241,122,69,4384,3739,{"$nulls":7},"*MGC",1654,210,141,96,4145,3798,{"$nulls":7},"*MGC",1793,165,75,68,17401,11466,{"$nulls":7},"*MGC",1582,88,348,83,1782,1063,{"$nulls":7},"*MGC",1361,216,285,239,4348,2348,{"$nulls":7},"P Twinscan",1599,1091,777,1476,2995,1584,{"$nulls":7},"UP Jigsaw",1298,139,41,690,907,717,{"$nulls":7},"*MGC",1435,166,266,234,1051,984,{"$nulls":7},"UP Jigsaw",1345,370,0,453,1160,1043,{"$nulls":7},"UP Jigsaw",1356,337,24,451,848,1037,{"$nulls":7},"Fgenesh",950,232,420,1639,708,443,{"$nulls":7},"UP Jigsaw",1111,63,0,994,242,155,{"$nulls":7},"*RefSeq",1298,198,645,781,182,688]
["P Twinscan",1565,1624,479,1275,4525,3603,{"$nulls":7},"P Twinscan",1581,1672,462,1228,4408,3803,{"$nulls":7},"P Twinscan",1522,1631,644,1146,4209,3866,{"$nulls":7},"P Twinscan",1726,1682,393,1142,14798,14136,{"$nulls":7},"UP Jigsaw",1368,166,0,634,1993,1066,{"$nulls":7},"UP Jigsaw",1338,253,2,575,4603,2116,{"$nulls":7},"UP Jigsaw",1473,220,15,460,3307,1398,{"$nulls":7},"*P CCDS",1258,4,0,246,360,1304,{"$nulls":7},"UP Jigsaw",1381,224,53,510,1288,801,{"$nulls":7},"*P CCDS",1268,6,5,229,467,1813,{"$nulls":7},"P Twinscan",1144,755,1399,1645,905,1192,{"$nulls":7},"UP Jigsaw",875,257,6,1030,714,512,{"$nulls":7},"*ExonWalk",1104,114,3581,3258,125,279,{"$nulls":7},"*U NscanEst",1123,411,14,744,439,606]
["UP Jigsaw",1540,308,1,319,4936,3217,{"$nulls":7},"UP Jigsaw",1471,352,0,345,4979,3342,{"$nulls":7},"UP Jigsaw",1493,368,0,307,4881,3223,{"$nulls":7},"UP Jigsaw",1553,299,2,314,17269,11838,{"$nulls":7},"P Twinscan",1261,1119,875,1688,2057,1109,{"$nulls":7},"P Twinscan",1270,1200,908,1565,4291,2496,{"$nulls":7},"*MGC",1454,195,308,144,2794,1930,{"$nulls":7},"*MGC",1256,179,480,186,869,797,{"$nulls":7},"*U NscanEst",1373,514,37,368,1606,491,{"$nulls":7},"*MGC",1210,236,426,229,891,1447,{"$nulls":7},"*P CCDS",1133,96,49,230,361,1747,{"$nulls":7},"*P CCDS",755,127,77,549,491,855,{"$nulls":7},"*MGC",755,68,409,869,204,549,{"$nulls":7},"UP Augustus",1116,562,91,522,748,304]
["*P CCDS",1319,64,10,115,2974,5400,{"$nulls":7},"*P CCDS",1262,77,0,169,3116,5414,{"$nulls":7},"*P CCDS",1272,86,7,143,2918,5407,{"$nulls":7},"*U NscanEst",1283,633,0,376,19578,9799,{"$nulls":7},"*P CCDS",1247,14,4,243,1207,1973,{"$nulls":7},"*U NscanEst",1128,546,45,573,5515,1414,{"$nulls":7},"*U NscanEst",1241,568,2,481,3738,1199,{"$nulls":7},"*U NscanEst",1086,516,9,681,1306,530,{"$nulls":7},"*P CCDS",1188,84,12,224,774,1508,{"$nulls":7},"P Twinscan",1125,1078,1320,1420,1282,1141,{"$nulls":7},"*U NscanEst",1106,481,10,695,1010,1125,{"$nulls":7},"*U NscanEst",677,584,0,1031,1036,388,{"$nulls":7},"*U NscanEst",743,269,0,1280,408,357,{"$nulls":7},"*P CCDS",1111,51,191,155,63,994]
["*U NscanEst",1288,642,1,361,5546,2859,{"$nulls":7},"*U NscanEst",1256,652,0,384,5667,2869,{"$nulls":7},"*U NscanEst",1240,641,0,411,5373,2984,{"$nulls":7},"*P CCDS",1251,80,3,174,11439,17970,{"$nulls":7},"*U NscanEst",1125,535,42,590,2417,885,{"$nulls":7},"*P CCDS",1104,112,13,279,3709,3244,{"$nulls":7},"*P CCDS",1198,44,10,256,1791,3189,{"$nulls":7},"P Twinscan",1004,713,1272,1954,1100,818,{"$nulls":7},"P Twinscan",1160,869,1324,1590,1372,938,{"$nulls":7},"*U NscanEst",1092,647,3,550,1342,1114,{"$nulls":7},"UP Augustus",1034,594,74,589,1123,1084,{"$nulls":7},"P Twinscan",653,586,706,2998,772,676,{"$nulls":7},"UP Augustus",736,324,17,1214,568,204,{"$nulls":7},"P Twinscan",1042,661,1875,1365,677,449]
["UP Augustus",1190,625,5,471,5337,3166,{"$nulls":7},"UP Augustus",1132,621,5,533,5335,3325,{"$nulls":7},"UP Augustus",1134,630,12,515,5089,3374,{"$nulls":7},"UP Augustus",1171,595,2,523,17538,11951,{"$nulls":7},"UP Augustus",1022,479,15,775,2404,1001,{"$nulls":7},"UP Augustus",964,570,35,722,4865,2228,{"$nulls":7},"UP Augustus",1120,541,27,603,3629,1429,{"$nulls":7},"UP Augustus",972,480,27,812,1183,767,{"$nulls":7},"UP Augustus",1043,501,97,650,1600,827,{"$nulls":7},"UP Augustus",1050,569,15,657,1493,1005,{"$nulls":7},"*MGC",950,176,519,456,652,1639,{"$nulls":7},"UP Augustus",652,430,6,1203,991,458,{"$nulls":7},"P Twinscan",728,423,890,2902,506,274,{"$nulls":7},"UP ExonHunter",987,847,34,1369,760,421]
["UP ExonHunter",950,875,5,1407,5055,3688,{"$nulls":7},"UP ExonHunter",940,869,5,1423,5190,3662,{"$nulls":7},"UP ExonHunter",926,886,3,1422,5049,3622,{"$nulls":7},"UP ExonHunter",925,835,0,1477,17123,12612,{"$nulls":7},"UP ExonHunter",860,665,5,1707,2240,1327,{"$nulls":7},"UP ExonHunter",844,693,9,1691,4965,2248,{"$nulls":7},"UP ExonHunter",974,673,12,1578,3543,1661,{"$nulls":7},"UP ExonHunter",792,647,17,1781,1231,899,{"$nulls":7},"UP ExonHunter",892,712,52,1581,1625,953,{"$nulls":7},"UP ExonHunter",824,808,18,1587,1425,1299,{"$nulls":7},"UP ExonHunter",920,831,23,1463,1272,1049,{"$nulls":7},"UP ExonHunter",519,599,16,2103,955,627,{"$nulls":7},"UP ExonHunter",616,552,13,2056,563,329,{"$nulls":7},"*MGC",875,132,563,531,263,1030]
["UP GeneZilla",799,974,4,981,5235,3659,{"$nulls":7},"UP GeneZilla",802,983,7,966,5242,3748,{"$nulls":7},"UP GeneZilla",787,1044,12,915,5128,3682,{"$nulls":7},"UP GeneZilla",822,986,5,945,16997,12841,{"$nulls":7},"UP GeneZilla",704,800,14,1240,2442,1281,{"$nulls":7},"UP GeneZilla",731,819,14,1194,4998,2328,{"$nulls":7},"UP GeneZilla",809,820,11,1118,3795,1574,{"$nulls":7},"UP GeneZilla",684,703,28,1343,1342,896,{"$nulls":7},"UP SGP2",794,705,52,1094,1705,971,{"$nulls":7},"UP GeneZilla",721,859,34,1144,1633,1194,{"$nulls":7},"UP SGP2",758,776,35,1076,1288,1195,{"$nulls":7},"UP GeneZilla",467,597,14,1680,988,646,{"$nulls":7},"UP GeneZilla",529,510,18,1701,675,304,{"$nulls":7},"UP SGP2",815,655,80,1095,838,515]
["UP SGP2",791,908,2,944,5284,3618,{"$nulls":7},"UP SGP2",774,867,2,1002,5249,3769,{"$nulls":7},"UP SGP2",769,854,9,1013,5052,3776,{"$nulls":7},"UP SGP2",804,849,5,987,17371,12485,{"$nulls":7},"UP SGP2",697,727,6,1215,2491,1239,{"$nulls":7},"UP SGP2",725,792,8,1120,5044,2288,{"$nulls":7},"UP SGP2",798,722,22,1103,3691,1689,{"$nulls":7},"UP SGP2",651,615,45,1334,1348,923,{"$nulls":7},"UP GeneZilla",777,803,30,1148,1691,1002,{"$nulls":7},"UP SGP2",714,728,33,1170,1633,1201,{"$nulls":7},"UP GeneZilla",736,891,39,1092,1343,1162,{"$nulls":7},"UP SGP2",445,510,37,1653,1005,651,{"$nulls":7},"UP SGP2",516,468,46,1615,620,372,{"$nulls":7},"UP GeneZilla",814,947,66,931,1036,318]
["*UP GenScan",695,1173,3,1171,4967,4031,{"$nulls":7},"*UP GenScan",695,1181,3,1163,4976,4121,{"$nulls":7},"*UP GenScan",701,1186,3,1152,4788,4108,{"$nulls":7},"*UP GenScan",725,1233,3,1081,16473,13462,{"$nulls":7},"UP Dogfish",627,535,1,516,2140,1660,{"$nulls":7},"*UP GenScan",644,1041,7,1350,5000,2413,{"$nulls":7},"*UP GenScan",704,962,6,1370,3415,2059,{"$nulls":7},"*UP GenScan",599,858,7,1578,1162,1161,{"$nulls":7},"*UP GenScan",682,1000,6,1354,1572,1216,{"$nulls":7},"*UP GenScan",621,1010,7,1404,1505,1422,{"$nulls":7},"*UP GenScan",699,1049,27,1267,1191,1351,{"$nulls":7},"*UP GenScan",416,759,11,1856,886,799,{"$nulls":7},"*UP GenScan",438,657,7,1940,533,537,{"$nulls":7},"*UP GenScan",708,1062,20,1252,894,566]
["UP Dogfish",667,589,0,423,4402,4624,{"$nulls":7},"UP GeneID",661,823,0,421,5285,3846,{"$nulls":7},"UP Dogfish",659,589,2,429,4119,4819,{"$nulls":7},"UP Dogfish",686,552,2,439,13069,16905,{"$nulls":7},"*UP GenScan",618,918,7,1499,2174,1635,{"$nulls":7},"UP Dogfish",626,551,5,497,4238,3193,{"$nulls":7},"UP Dogfish",676,525,6,472,3302,2200,{"$nulls":7},"UP Dogfish",574,544,10,551,1199,1149,{"$nulls":7},"UP Dogfish",614,549,31,485,1414,1442,{"$nulls":7},"UP Dogfish",606,580,11,482,1350,1592,{"$nulls":7},"UP Dogfish",614,493,13,559,994,1633,{"$nulls":7},"UP Dogfish",352,470,0,857,778,971,{"$nulls":7},"UP Dogfish",427,371,4,877,529,552,{"$nulls":7},"UP Dogfish",688,454,16,521,609,871]
["UP GeneID",661,787,0,457,5284,3748,{"$nulls":7},"UP Dogfish",649,550,2,478,4389,4754,{"$nulls":7},"UP GeneID",644,849,0,412,5081,3872,{"$nulls":7},"UP GeneID",669,812,0,424,17200,12791,{"$nulls":7},"UP GeneID",572,649,0,684,2443,1412,{"$nulls":7},"UP GeneID",579,726,0,600,5197,2281,{"$nulls":7},"UP GeneID",658,651,2,594,3761,1759,{"$nulls":7},"UP GeneID",545,585,0,775,1416,961,{"$nulls":7},"UP GeneID",610,668,0,627,1803,1057,{"$nulls":7},"UP GeneID",578,700,0,627,1698,1272,{"$nulls":7},"UP GeneID",576,661,2,666,1326,1339,{"$nulls":7},"UP GeneID",336,527,0,1042,1021,744,{"$nulls":7},"UP GeneID",403,464,0,1038,697,408,{"$nulls":7},"UP GeneID",607,745,12,541,1071,490]
["UP GeneMark",605,736,1,843,5138,3950,{"$nulls":7},"UP GeneMark",600,707,4,874,5122,4070,{"$nulls":7},"UP GeneMark",580,724,0,881,5019,3998,{"$nulls":7},"UP GeneMark",591,737,16,841,15197,14872,{"$nulls":7},"UP GeneMark",525,565,23,1072,2520,1382,{"$nulls":7},"UP GeneMark",529,580,19,1057,4463,3065,{"$nulls":7},"UP GeneMark",575,576,36,998,3744,1859,{"$nulls":7},"UP GeneMark",502,532,33,1118,1495,925,{"$nulls":7},"UP GeneMark",552,596,80,957,1831,1087,{"$nulls":7},"UP GeneMark",533,576,50,1026,1617,1398,{"$nulls":7},"UP GeneMark",562,616,77,930,1533,1146,{"$nulls":7},"UP GeneMark",320,380,17,1468,1083,698,{"$nulls":7},"UP GeneMark",389,408,18,1370,763,356,{"$nulls":7},"UP GeneMark",567,562,78,978,976,625]
["UP Saga",478,660,32,567,4269,4946,{"$nulls":7},"UP Saga",463,673,2,599,4111,5218,{"$nulls":7},"UP Saga",476,629,5,627,4021,5100,{"$nulls":7},"UP Saga",488,647,0,602,14452,15720,{"$nulls":7},"UP Saga",415,489,21,812,1859,2153,{"$nulls":7},"UP Saga",455,567,9,706,4268,3334,{"$nulls":7},"UP Saga",501,502,13,721,3215,2462,{"$nulls":7},"UP Saga",380,456,40,861,1058,1484,{"$nulls":7},"UP Saga",429,483,72,753,1354,1687,{"$nulls":7},"UP Saga",460,520,52,705,1334,1754,{"$nulls":7},"UP Saga",470,506,54,707,1012,1759,{"$nulls":7},"UP Saga",271,375,2,1089,755,1075,{"$nulls":7},"UP Saga",294,419,15,1009,529,685,{"$nulls":7},"UP Saga",488,510,68,671,739,941]
["// done: 2006-03-03_21:46:49",{"$nulls":13},"// done: 2006-03-03_21:56:26",{"$nulls":13},"// done: 2006-03-03_21:56:46",{"$nulls":13},"// done: 2006-03-03_17:29:35",{"$nulls":13},"// done: 2006-03-03_21:57:29",{"$nulls":13},"// done: 2006-03-03_21:57:47",{"$nulls":13},"// done: 2006-03-03_21:58:07",{"$nulls":13},"// done: 2006-03-03_21:58:25",{"$nulls":13},"// done: 2006-03-03_21:58:44",{"$nulls":13},"// done: 2006-03-03_21:59:03",{"$nulls":13},"// done: 2006-03-03_21:59:21",{"$nulls":13},"// done: 2006-03-03_21:59:40",{"$nulls":13},"// done: 2006-03-03_22:03:03",{"$nulls":13},"// done: 2006-03-03_21:59:59"]
["######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################"]
["// start: 2006-03-03_21:46:49",{"$nulls":13},"// start: 2006-03-03_21:56:26",{"$nulls":13},"// start: 2006-03-03_21:56:46",{"$nulls":13},"// start: 2006-03-03_17:29:48",{"$nulls":13},"// start: 2006-03-03_21:57:29",{"$nulls":13},"// start: 2006-03-03_21:57:48",{"$nulls":13},"// start: 2006-03-03_21:58:07",{"$nulls":13},"// start: 2006-03-03_21:58:25",{"$nulls":13},"// start: 2006-03-03_21:58:44",{"$nulls":13},"// start: 2006-03-03_21:59:03",{"$nulls":13},"// start: 2006-03-03_21:59:21",{"$nulls":13},"// start: 2006-03-03_21:59:40",{"$nulls":13},"// start: 2006-03-03_22:03:03",{"$nulls":13},"// start: 2006-03-03_21:59:59"]
["// data parsed, start statistics: 2006-03-03_21:46:57",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:56:35",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:56:54",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_17:29:59",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:57:37",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:57:56",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:15",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:34",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:58:53",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:11",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:29",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_21:59:49",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_22:03:12",{"$nulls":13},"// data parsed, start statistics: 2006-03-03_22:00:07"]
["######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################"]
["## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part",{"$nulls":13},"## Intron chaining (all introns and exons count multiply)multi, 31 regions, restricted to coding part"]
["Found 23557 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22523 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna",{"$nulls":13},"Found 22522 mrna"]
[]
[]
["Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method",{"$nulls":13},"Count the transcripts in each method"]
["Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon",{"$nulls":6},"Program","Transcript with intron","Intronless transcript","All transcript","Exon (multi)","Terminal exon","Intron (multi)","% Terminal exon"]
["Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46]
["*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18,{"$nulls":6},"*ECgene",3551,2854,6405,30938,9956,24533,32.18]
["*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89,{"$nulls":6},"*AceView",1627,1058,2685,10810,4312,8125,39.89]
["AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37,{"$nulls":6},"AceView",1460,194,1654,9332,3114,7678,33.37]
["*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83,{"$nulls":6},"*ExonWalk",873,22,895,8100,1768,7205,21.83]
["UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01,{"$nulls":6},"UP ExonHunter",807,220,1027,4264,1834,3237,43.01]
["UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29,{"$nulls":6},"Gencode",649,74,723,5891,1372,5168,23.29]
["UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63,{"$nulls":6},"UP SGP2",552,159,711,3356,1263,2645,37.63]
["P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42,{"$nulls":6},"UP GeneMark",551,81,632,2817,1183,2185,42]
["Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47,{"$nulls":6},"P Twinscan",547,108,655,5598,1202,4943,21.47]
["UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32,{"$nulls":6},"Exogean",538,18,556,5383,1094,4827,20.32]
["*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19,{"$nulls":6},"UP GeneZilla",477,179,656,3414,1133,2758,33.19]
["Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23,{"$nulls":6},"*KnownGene",477,77,554,4483,1031,3929,23]
["Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08,{"$nulls":6},"Fgenesh",458,101,559,3622,1017,3063,28.08]
["*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87,{"$nulls":6},"Pairagon",437,71,508,3653,945,3145,25.87]
["Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11,{"$nulls":6},"*Ensembl",418,67,485,3746,903,3261,24.11]
["*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07,{"$nulls":6},"Ensembl",418,65,483,3743,901,3260,24.07]
["UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28,{"$nulls":6},"*UP GenScan",395,59,454,3496,849,3042,24.28]
["*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52,{"$nulls":6},"UP Saga",331,47,378,2115,709,1737,33.52]
["UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26,{"$nulls":6},"*RefSeq",325,57,382,3040,707,2658,23.26]
["*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43,{"$nulls":6},"UP Augustus",312,87,399,2690,711,2291,26.43]
["UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96,{"$nulls":6},"*MGC",310,32,342,2251,652,1909,28.96]
["UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32,{"$nulls":6},"UP GeneID",267,51,318,2223,585,1905,26.32]
["*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"UP Jigsaw",259,67,326,2494,585,2168,23.46,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37]
["UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"*U NscanEst",252,49,301,2366,553,2065,23.37,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29]
["*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14,{"$nulls":6},"UP Dogfish",204,15,219,1898,423,1679,22.29,{"$nulls":6},"*P CCDS",201,14,215,1723,416,1508,24.14]
[]
["Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns",{"$nulls":13},"Analyse the transcript with introns"]
["Program","Transcript identical to Gencode","Transcript best matching Gencode","New transcript in Gencode gene","New transcript in new gene","Program","Missed Gencode transcript in touched gene","Missed Gencode transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *AceView","Transcript best matching *AceView","New transcript in *AceView gene","New transcript in new gene","Program","Missed *AceView transcript in touched gene","Missed *AceView transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to AceView","Transcript best matching AceView","New transcript in AceView gene","New transcript in new gene","Program","Missed AceView transcript in touched gene","Missed AceView transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *ECgene","Transcript best matching *ECgene","New transcript in *ECgene gene","New transcript in new gene","Program","Missed *ECgene transcript in touched gene","Missed *ECgene transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *KnownGene","Transcript best matching *KnownGene","New transcript in *KnownGene gene","New transcript in new gene","Program","Missed *KnownGene transcript in touched gene","Missed *KnownGene transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *ExonWalk","Transcript best matching *ExonWalk","New transcript in *ExonWalk gene","New transcript in new gene","Program","Missed *ExonWalk transcript in touched gene","Missed *ExonWalk transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to Exogean","Transcript best matching Exogean","New transcript in Exogean gene","New transcript in new gene","Program","Missed Exogean transcript in touched gene","Missed Exogean transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *RefSeq","Transcript best matching *RefSeq","New transcript in *RefSeq gene","New transcript in new gene","Program","Missed *RefSeq transcript in touched gene","Missed *RefSeq transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to Pairagon","Transcript best matching Pairagon","New transcript in Pairagon gene","New transcript in new gene","Program","Missed Pairagon transcript in touched gene","Missed Pairagon transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *Ensembl","Transcript best matching *Ensembl","New transcript in *Ensembl gene","New transcript in new gene","Program","Missed *Ensembl transcript in touched gene","Missed *Ensembl transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to Fgenesh","Transcript best matching Fgenesh","New transcript in Fgenesh gene","New transcript in new gene","Program","Missed Fgenesh transcript in touched gene","Missed Fgenesh transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *MGC","Transcript best matching *MGC","New transcript in *MGC gene","New transcript in new gene","Program","Missed *MGC transcript in touched gene","Missed *MGC transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to *P CCDS","Transcript best matching *P CCDS","New transcript in *P CCDS gene","New transcript in new gene","Program","Missed *P CCDS transcript in touched gene","Missed *P CCDS transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif",null,"Program","Transcript identical to UP Jigsaw","Transcript best matching UP Jigsaw","New transcript in UP Jigsaw gene","New transcript in new gene","Program","Missed UP Jigsaw transcript in touched gene","Missed UP Jigsaw transcript in missed gene","Sensitivity","Sensitivity eval","Specificity","Specificity eval","Verif"]
["Gencode",649,0,0,0,"Gencode",0,0,100,0,100,0,0,null,"*AceView",1627,0,0,0,"*AceView",0,0,100,0,100,0,0,null,"AceView",1460,0,0,0,"AceView",0,0,100,44.68,100,19.31,0,null,"*ECgene",3551,0,0,0,"*ECgene",0,0,100,56.86,100,8.84,0,null,"*KnownGene",477,0,0,0,"*KnownGene",0,0,100,0,100,0,0,null,"*ExonWalk",873,0,0,0,"*ExonWalk",0,0,100,0,100,0,0,null,"Exogean",538,0,0,0,"Exogean",0,0,100,42.53,100,52.44,0,null,"*RefSeq",325,0,0,0,"*RefSeq",0,0,100,0,100,0,0,null,"Pairagon",437,0,0,0,"Pairagon",0,0,100,39.29,100,60.34,0,null,"*Ensembl",418,0,0,0,"*Ensembl",0,0,100,40.52,100,54.09,0,null,"Fgenesh",458,0,0,0,"Fgenesh",0,0,100,36.21,100,41.61,0,null,"*MGC",310,0,0,0,"*MGC",0,0,100,0,100,0,0,null,"*P CCDS",201,0,0,0,"*P CCDS",0,0,100,28.97,100,85.58,0,null,"UP Jigsaw",259,0,0,0,"UP Jigsaw",0,0,100,34.05,100,65.95,0]
["*ECgene",476,131,1774,1170,"*ECgene",31,11,73.34,56.86,13.4,8.84,0,null,"AceView",1092,136,133,99,"AceView",255,144,67.12,44.68,74.79,19.31,0,null,"*AceView",1092,136,233,166,"*AceView",159,73,74.79,0,67.12,0,0,null,"AceView",849,338,97,176,"AceView",1870,494,23.91,44.68,58.15,19.31,0,null,"*AceView",359,83,614,571,"*AceView",23,12,75.26,0,22.07,0,0,null,"*ECgene",534,256,1706,1055,"*ECgene",58,25,61.17,56.86,15.04,8.84,0,null,"AceView",373,98,496,493,"AceView",24,43,69.33,44.68,25.55,19.31,0,null,"*ECgene",285,34,1907,1325,"*ECgene",4,2,87.69,56.86,8.03,8.84,0,null,"*ECgene",327,62,1817,1345,"*ECgene",28,20,74.83,56.86,9.21,8.84,0,null,"Ensembl",418,0,0,0,"Ensembl",0,0,100,39.75,100,54.64,0,null,"*ECgene",243,80,1897,1331,"*ECgene",21,114,53.06,56.86,6.84,8.84,0,null,"*ECgene",229,51,1591,1680,"*ECgene",25,5,73.87,56.86,6.45,8.84,0,null,"Ensembl",201,0,65,152,"Ensembl",0,0,100,39.75,48.09,54.64,0,null,"*ECgene",186,48,1981,1336,"*ECgene",11,14,71.81,56.86,5.24,8.84,0]
["AceView",468,99,451,442,"AceView",64,18,72.11,44.68,32.05,19.31,0,null,"*ECgene",824,448,1748,531,"*ECgene",221,134,50.65,56.86,23.2,8.84,0,null,"*ECgene",849,338,1818,546,"*ECgene",177,96,58.15,56.86,23.91,8.84,0,null,"*AceView",824,448,110,245,"*AceView",2013,266,23.2,0,50.65,0,0,null,"*ECgene",357,94,1813,1287,"*ECgene",17,9,74.84,56.86,10.05,8.84,0,null,"AceView",403,193,378,486,"AceView",228,49,46.16,44.68,27.6,19.31,0,null,"*ECgene",357,138,2019,1037,"*ECgene",26,17,66.36,56.86,10.05,8.84,0,null,"*KnownGene",281,12,142,42,"*KnownGene",18,14,86.46,0,58.91,0,0,null,"*AceView",279,103,623,622,"*AceView",33,22,63.84,0,17.15,0,0,null,"*ECgene",277,79,1887,1308,"*ECgene",32,30,66.27,56.86,7.8,8.84,0,null,"*RefSeq",232,52,24,17,"*RefSeq",7,167,50.66,0,71.38,0,0,null,"*KnownGene",206,19,151,101,"*KnownGene",75,10,66.45,0,43.19,0,0,null,"*Ensembl",201,0,65,152,"*Ensembl",0,0,100,40.52,48.09,54.09,0,null,"Gencode",178,44,320,107,"Gencode",3,34,68.73,0,27.43,0,0]
["*AceView",459,112,558,498,"*AceView",67,11,70.72,0,28.21,0,0,null,"Gencode",459,112,62,16,"Gencode",569,487,28.21,0,70.72,0,0,null,"Gencode",468,99,64,18,"Gencode",458,435,32.05,0,72.11,0,0,null,"*ExonWalk",534,256,21,62,"*ExonWalk",1723,1038,15.04,0,61.17,0,0,null,"AceView",354,79,532,495,"AceView",26,18,74.21,44.68,24.25,19.31,0,null,"*AceView",376,231,447,573,"*AceView",239,27,43.07,0,23.11,0,0,null,"*AceView",338,125,582,582,"*AceView",49,26,62.83,0,20.77,0,0,null,"Pairagon",275,17,96,49,"Pairagon",22,11,84.62,39.29,62.93,60.34,0,null,"*RefSeq",275,17,21,12,"*RefSeq",102,43,62.93,0,84.62,0,0,null,"*AceView",263,83,696,585,"*AceView",32,40,62.92,0,16.16,0,0,null,"*AceView",225,90,714,598,"*AceView",24,119,49.13,0,13.83,0,0,null,"Pairagon",200,33,106,98,"Pairagon",47,30,64.52,39.29,45.77,60.34,0,null,"*RefSeq",197,2,50,76,"*RefSeq",0,2,98.01,0,60.62,0,0,null,"*KnownGene",177,40,205,55,"*KnownGene",3,39,68.34,0,37.11,0,0]
["*KnownGene",328,56,60,33,"*KnownGene",187,78,50.54,0,68.76,0,0,null,"*ExonWalk",376,231,214,52,"*ExonWalk",450,570,23.11,0,43.07,0,0,null,"*ExonWalk",403,193,224,53,"*ExonWalk",381,483,27.6,0,46.16,0,0,null,"Gencode",476,131,19,23,"Gencode",1789,1155,13.4,0,73.34,0,0,null,"Gencode",328,56,186,79,"Gencode",60,33,68.76,0,50.54,0,0,null,"Gencode",323,97,133,96,"Gencode",303,150,37,0,49.77,0,0,null,"Gencode",308,96,145,100,"Gencode",59,75,57.25,0,47.46,0,0,null,"*AceView",270,40,708,609,"*AceView",10,5,83.08,0,16.59,0,0,null,"AceView",271,99,545,545,"AceView",34,33,62.01,44.68,18.56,19.31,0,null,"AceView",260,84,588,528,"AceView",15,59,62.2,44.68,17.81,19.31,0,null,"AceView",219,93,625,523,"AceView",9,137,47.82,44.68,15,19.31,0,null,"*AceView",198,74,567,788,"*AceView",30,8,63.87,0,12.17,0,0,null,"*KnownGene",189,5,138,145,"*KnownGene",3,4,94.03,0,39.62,0,0,null,"*AceView",173,61,804,589,"*AceView",10,15,66.8,0,10.63,0,0]
["*ExonWalk",323,97,303,150,"*ExonWalk",134,95,49.77,0,37,0,0,null,"*KnownGene",359,83,17,18,"*KnownGene",623,562,22.07,0,75.26,0,0,null,"Exogean",373,98,22,45,"Exogean",502,487,25.55,42.53,69.33,52.44,0,null,"Exogean",357,138,11,32,"Exogean",2038,1018,10.05,42.53,66.36,52.44,0,null,"*RefSeq",281,12,18,14,"*RefSeq",142,42,58.91,0,86.46,0,0,null,"*KnownGene",261,88,69,59,"*KnownGene",346,178,29.9,0,54.72,0,0,null,"*KnownGene",280,69,65,63,"*KnownGene",103,86,52.04,0,58.7,0,0,null,"AceView",269,43,608,540,"AceView",7,6,82.77,44.68,18.42,19.31,0,null,"Gencode",267,63,213,106,"Gencode",72,35,61.1,0,41.14,0,0,null,"*KnownGene",258,56,126,37,"*KnownGene",33,71,61.72,0,54.09,0,0,null,"*KnownGene",216,53,152,56,"*KnownGene",20,169,47.16,0,45.28,0,0,null,"AceView",195,66,505,694,"AceView",32,17,62.9,44.68,13.36,19.31,0,null,"*ECgene",188,8,1462,1893,"*ECgene",4,1,93.53,56.86,5.29,8.84,0,null,"AceView",169,62,716,513,"AceView",4,24,65.25,44.68,11.58,19.31,0]
["Exogean",308,96,55,79,"Exogean",146,99,47.46,42.53,57.25,52.44,0,null,"Exogean",338,125,27,48,"Exogean",588,576,20.77,42.53,62.83,52.44,0,null,"*KnownGene",354,79,25,19,"*KnownGene",535,492,24.25,0,74.21,0,0,null,"*KnownGene",357,94,8,18,"*KnownGene",1837,1263,10.05,0,74.84,0,0,null,"Exogean",280,69,96,93,"Exogean",65,63,58.7,42.53,52.04,52.44,0,null,"Exogean",248,133,61,96,"Exogean",369,123,28.41,42.53,46.1,52.44,0,null,"*ExonWalk",248,133,364,128,"*ExonWalk",61,96,46.1,0,28.41,0,0,null,"Gencode",263,37,259,90,"Gencode",16,9,80.92,0,40.52,0,0,null,"*KnownGene",267,36,113,61,"*KnownGene",88,46,61.1,0,55.97,0,0,null,"Gencode",256,74,245,74,"Gencode",23,65,61.24,0,39.45,0,0,null,"Pairagon",215,58,113,51,"Pairagon",25,160,46.94,39.29,49.2,60.34,0,null,"Gencode",193,35,215,206,"Gencode",55,27,62.26,0,29.74,0,0,null,"Pairagon",187,10,118,122,"Pairagon",1,3,93.03,39.29,42.79,60.34,0,null,"*RefSeq",165,43,87,30,"*RefSeq",2,49,63.71,0,50.77,0,0]
["Pairagon",267,63,65,42,"Pairagon",216,103,41.14,39.29,61.1,60.34,0,null,"Pairagon",279,103,22,33,"Pairagon",628,617,17.15,39.29,63.84,60.34,0,null,"Pairagon",271,99,31,36,"Pairagon",550,540,18.56,39.29,62.01,60.34,0,null,"Pairagon",327,62,12,36,"Pairagon",1837,1325,9.21,39.29,74.83,60.34,0,null,"Pairagon",267,36,82,52,"Pairagon",114,60,55.97,39.29,61.1,60.34,0,null,"Pairagon",231,65,65,76,"Pairagon",381,196,26.46,39.29,52.86,60.34,0,null,"*RefSeq",218,51,20,36,"*RefSeq",157,112,40.52,0,67.08,0,0,null,"Ensembl",235,45,50,88,"Ensembl",32,13,72.31,39.75,56.22,54.64,0,null,"*ExonWalk",231,65,381,196,"*ExonWalk",65,76,52.86,0,26.46,0,0,null,"*RefSeq",235,45,32,13,"*RefSeq",56,82,56.22,0,72.31,0,0,null,"Gencode",214,72,269,94,"Gencode",18,154,46.72,0,32.97,0,0,null,"*ExonWalk",180,46,373,274,"*ExonWalk",46,38,58.06,0,20.62,0,0,null,"*AceView",184,12,538,893,"*AceView",2,3,91.54,0,11.31,0,0,null,"Pairagon",162,46,166,63,"Pairagon",6,45,62.55,39.29,37.07,60.34,0]
["*RefSeq",263,37,16,9,"*RefSeq",260,89,40.52,0,80.92,0,0,null,"*RefSeq",270,40,9,6,"*RefSeq",710,607,16.59,0,83.08,0,0,null,"*RefSeq",269,43,7,6,"*RefSeq",610,538,18.42,0,82.77,0,0,null,"*RefSeq",285,34,2,4,"*RefSeq",1925,1307,8.03,0,87.69,0,0,null,"*ExonWalk",261,88,346,178,"*ExonWalk",69,59,54.72,0,29.9,0,0,null,"*RefSeq",219,53,18,35,"*RefSeq",418,183,25.09,0,67.38,0,0,null,"Ensembl",216,80,19,103,"Ensembl",139,103,40.15,39.75,51.67,54.64,0,null,"*Ensembl",235,45,50,88,"*Ensembl",32,13,72.31,40.52,56.22,54.09,0,null,"Ensembl",227,56,39,96,"Ensembl",111,43,51.95,39.75,54.31,54.64,0,null,"Pairagon",227,56,105,49,"Pairagon",47,88,54.31,39.29,51.95,60.34,0,null,"Ensembl",202,77,66,73,"Ensembl",31,148,44.1,39.75,48.33,54.64,0,null,"*RefSeq",166,29,58,72,"*RefSeq",87,28,53.55,0,51.08,0,0,null,"Gencode",182,11,212,244,"Gencode",2,6,90.55,0,28.04,0,0,null,"*ExonWalk",162,36,490,185,"*ExonWalk",1,60,62.55,0,18.56,0,0]
["Ensembl",256,74,16,72,"Ensembl",246,73,39.45,39.75,61.24,54.64,0,null,"Ensembl",264,82,10,62,"Ensembl",700,581,16.23,39.75,63.16,54.64,0,null,"Ensembl",260,84,13,61,"Ensembl",592,524,17.81,39.75,62.2,54.64,0,null,"Ensembl",277,79,3,59,"Ensembl",1907,1288,7.8,39.75,66.27,54.64,0,null,"Ensembl",258,56,25,79,"Ensembl",128,35,54.09,39.75,61.72,54.64,0,null,"Ensembl",207,81,28,102,"Ensembl",412,173,23.71,39.75,49.52,54.64,0,null,"*Ensembl",216,80,19,103,"*Ensembl",139,103,40.15,40.52,51.67,54.09,0,null,"Fgenesh",232,52,5,169,"Fgenesh",24,17,71.38,36.21,50.66,41.61,0,null,"*Ensembl",227,56,39,96,"*Ensembl",111,43,51.95,40.52,54.31,54.09,0,null,"Exogean",216,80,134,108,"Exogean",19,103,51.67,42.53,40.15,52.44,0,null,"*Ensembl",202,77,66,73,"*Ensembl",31,148,44.1,40.52,48.33,54.09,0,null,"Ensembl",154,48,71,145,"Ensembl",79,29,49.68,39.75,36.84,54.64,0,null,"AceView",180,14,477,789,"AceView",2,5,89.55,44.68,12.33,19.31,0,null,"Ensembl",161,62,111,84,"Ensembl",1,35,62.16,39.75,38.52,54.64,0]
["*Ensembl",256,74,16,72,"*Ensembl",246,73,39.45,40.52,61.24,54.09,0,null,"*Ensembl",263,83,10,62,"*Ensembl",700,581,16.16,40.52,62.92,54.09,0,null,"*Ensembl",260,84,13,61,"*Ensembl",592,524,17.81,40.52,62.2,54.09,0,null,"*Ensembl",277,79,3,59,"*Ensembl",1909,1286,7.8,40.52,66.27,54.09,0,null,"*Ensembl",258,56,25,79,"*Ensembl",128,35,54.09,40.52,61.72,54.09,0,null,"*Ensembl",207,81,28,102,"*Ensembl",412,173,23.71,40.52,49.52,54.09,0,null,"Pairagon",215,64,76,82,"Pairagon",133,126,39.96,39.29,49.2,60.34,0,null,"*ExonWalk",219,53,418,183,"*ExonWalk",18,35,67.38,0,25.09,0,0,null,"Exogean",215,64,128,131,"Exogean",76,82,49.2,42.53,39.96,52.44,0,null,"*ExonWalk",207,81,412,173,"*ExonWalk",28,102,49.52,0,23.71,0,0,null,"*ExonWalk",175,79,419,200,"*ExonWalk",18,186,38.21,0,20.05,0,0,null,"*Ensembl",154,48,71,145,"*Ensembl",79,29,49.68,40.52,36.84,54.09,0,null,"Fgenesh",164,24,45,225,"Fgenesh",6,7,81.59,36.21,35.81,41.61,0,null,"*Ensembl",161,62,111,84,"*Ensembl",1,35,62.16,40.52,38.52,54.09,0]
["Fgenesh",214,72,17,155,"Fgenesh",270,93,32.97,36.21,46.72,41.61,0,null,"Fgenesh",225,90,7,136,"Fgenesh",722,590,13.83,36.21,49.13,41.61,0,null,"Fgenesh",219,93,7,139,"Fgenesh",632,516,15,36.21,47.82,41.61,0,null,"Fgenesh",243,80,1,134,"Fgenesh",1924,1304,6.84,36.21,53.06,41.61,0,null,"Fgenesh",216,53,17,172,"Fgenesh",153,55,45.28,36.21,47.16,41.61,0,null,"*MGC",180,46,46,38,"*MGC",373,274,20.62,0,58.06,0,0,null,"Fgenesh",173,80,21,184,"Fgenesh",169,116,32.16,36.21,37.77,41.61,0,null,"Exogean",218,51,153,116,"Exogean",20,36,67.08,42.53,40.52,52.44,0,null,"Fgenesh",215,58,21,164,"Fgenesh",122,42,49.2,36.21,46.94,41.61,0,null,"Fgenesh",202,77,28,151,"Fgenesh",72,67,48.33,36.21,44.1,41.61,0,null,"Exogean",173,80,165,120,"Exogean",21,184,37.77,42.53,32.16,52.44,0,null,"Exogean",150,52,147,189,"Exogean",61,47,48.39,42.53,27.88,52.44,0,null,"*ExonWalk",153,22,368,330,"*ExonWalk",4,22,76.12,0,17.53,0,0,null,"Exogean",151,54,233,100,"Exogean",3,51,58.3,42.53,28.07,52.44,0]
["*MGC",193,35,55,27,"*MGC",216,205,29.74,0,62.26,0,0,null,"*MGC",198,74,25,13,"*MGC",569,786,12.17,0,63.87,0,0,null,"*MGC",195,66,29,20,"*MGC",507,692,13.36,0,62.9,0,0,null,"*MGC",229,51,19,11,"*MGC",1607,1664,6.45,0,73.87,0,0,null,"*MGC",206,19,75,10,"*MGC",151,101,43.19,0,66.45,0,0,null,"Fgenesh",175,79,18,186,"Fgenesh",420,199,20.05,36.21,38.21,41.61,0,null,"*P CCDS",152,17,4,28,"*P CCDS",139,230,28.25,28.97,75.62,85.58,0,null,"*P CCDS",197,2,0,2,"*P CCDS",50,76,60.62,28.97,98.01,85.58,0,null,"*MGC",200,33,47,30,"*MGC",107,97,45.77,0,64.52,0,0,null,"*P CCDS",201,0,0,0,"*P CCDS",65,152,48.09,28.97,100,85.58,0,null,"*P CCDS",164,24,6,7,"*P CCDS",45,225,35.81,28.97,81.59,85.58,0,null,"Fgenesh",136,47,49,226,"Fgenesh",97,30,43.87,36.21,29.69,41.61,0,null,"Exogean",152,17,139,230,"Exogean",4,28,75.62,42.53,28.25,52.44,0,null,"Fgenesh",147,70,73,168,"Fgenesh",8,34,56.76,36.21,32.1,41.61,0]
["*P CCDS",182,11,2,6,"*P CCDS",212,244,28.04,28.97,90.55,85.58,0,null,"*P CCDS",184,12,0,5,"*P CCDS",539,892,11.31,28.97,91.54,85.58,0,null,"*P CCDS",180,14,2,5,"*P CCDS",478,788,12.33,28.97,89.55,85.58,0,null,"*P CCDS",188,8,1,4,"*P CCDS",1474,1881,5.29,28.97,93.53,85.58,0,null,"*P CCDS",189,5,3,4,"*P CCDS",138,145,39.62,28.97,94.03,85.58,0,null,"UP Jigsaw",162,36,0,61,"UP Jigsaw",492,183,18.56,34.05,62.55,65.95,0,null,"UP Jigsaw",151,54,3,51,"UP Jigsaw",238,95,28.07,34.05,58.3,65.95,0,null,"*MGC",166,29,87,28,"*MGC",58,72,51.08,0,53.55,0,0,null,"*P CCDS",187,10,1,3,"*P CCDS",119,121,42.79,28.97,93.03,85.58,0,null,"UP Jigsaw",161,62,0,36,"UP Jigsaw",120,75,38.52,34.05,62.16,65.95,0,null,"UP Jigsaw",147,70,4,38,"UP Jigsaw",80,161,32.1,34.05,56.76,65.95,0,null,"UP Jigsaw",135,36,1,87,"UP Jigsaw",107,32,43.55,34.05,52.12,65.95,0,null,"UP Jigsaw",138,21,0,100,"UP Jigsaw",25,17,68.66,34.05,53.28,65.95,0,null,"*P CCDS",138,21,25,17,"*P CCDS",0,100,53.28,28.97,68.66,85.58,0]
["UP Jigsaw",178,44,2,35,"UP Jigsaw",321,106,27.43,34.05,68.73,65.95,0,null,"UP Jigsaw",173,61,0,25,"UP Jigsaw",807,586,10.63,34.05,66.8,65.95,0,null,"UP Jigsaw",169,62,0,28,"UP Jigsaw",718,511,11.58,34.05,65.25,65.95,0,null,"UP Jigsaw",186,48,0,25,"UP Jigsaw",2003,1314,5.24,34.05,71.81,65.95,0,null,"UP Jigsaw",177,40,0,42,"UP Jigsaw",205,55,37.11,34.05,68.34,65.95,0,null,"*P CCDS",153,22,4,22,"*P CCDS",368,330,17.53,28.97,76.12,85.58,0,null,"*MGC",150,52,61,47,"*MGC",148,188,27.88,0,48.39,0,0,null,"UP Jigsaw",165,43,1,50,"UP Jigsaw",87,30,50.77,34.05,63.71,65.95,0,null,"UP Jigsaw",162,46,3,48,"UP Jigsaw",173,56,37.07,34.05,62.55,65.95,0,null,"*MGC",154,48,78,30,"*MGC",72,144,36.84,0,49.68,0,0,null,"*MGC",136,47,96,31,"*MGC",49,226,29.69,0,43.87,0,0,null,"*P CCDS",128,20,15,38,"*P CCDS",81,81,41.29,28.97,63.68,85.58,0,null,"*MGC",128,20,81,81,"*MGC",15,38,63.68,0,41.29,0,0,null,"*MGC",135,36,107,32,"*MGC",1,87,52.12,0,43.55,0,0]
["*U NscanEst",116,84,1,51,"*U NscanEst",335,114,17.87,0,46.03,0,0,null,"*U NscanEst",116,99,0,37,"*U NscanEst",778,634,7.13,0,46.03,0,0,null,"*U NscanEst",112,98,0,42,"*U NscanEst",691,559,7.67,0,44.44,0,0,null,"*U NscanEst",120,89,0,43,"*U NscanEst",2030,1312,3.38,0,47.62,0,0,null,"*U NscanEst",114,78,1,59,"*U NscanEst",193,92,23.9,0,45.24,0,0,null,"*U NscanEst",114,69,2,67,"*U NscanEst",500,190,13.06,0,45.24,0,0,null,"*U NscanEst",95,86,2,69,"*U NscanEst",227,130,17.66,0,37.7,0,0,null,"*U NscanEst",111,75,1,65,"*U NscanEst",98,41,34.15,0,44.05,0,0,null,"*U NscanEst",155,67,2,28,"*U NscanEst",164,51,35.47,0,61.51,0,0,null,"*U NscanEst",111,80,1,60,"*U NscanEst",120,107,26.56,0,44.05,0,0,null,"UP Augustus",104,116,16,76,"UP Augustus",84,154,22.71,22.65,33.33,35.59,0,null,"*U NscanEst",88,65,0,99,"*U NscanEst",101,56,28.39,0,34.92,0,0,null,"*U NscanEst",98,46,0,108,"*U NscanEst",34,23,48.76,0,38.89,0,0,null,"*U NscanEst",103,85,3,61,"*U NscanEst",17,54,39.77,0,40.87,0,0]
["UP Augustus",110,111,4,87,"UP Augustus",304,124,16.95,22.65,35.26,35.59,0,null,"UP Augustus",114,127,1,70,"UP Augustus",791,595,7.01,22.65,36.54,35.59,0,null,"UP Augustus",111,122,6,73,"UP Augustus",690,537,7.6,22.65,35.58,35.59,0,null,"UP Augustus",115,132,1,64,"UP Augustus",1877,1427,3.24,22.65,36.86,35.59,0,null,"UP Augustus",108,99,8,97,"UP Augustus",193,77,22.64,22.65,34.62,35.59,0,null,"UP Augustus",99,102,7,104,"UP Augustus",457,215,11.34,22.65,31.73,35.59,0,null,"UP Augustus",88,117,7,100,"UP Augustus",211,122,16.36,22.65,28.21,35.59,0,null,"UP Augustus",99,100,11,102,"UP Augustus",87,39,30.46,22.65,31.73,35.59,0,null,"UP Augustus",101,98,13,100,"UP Augustus",173,65,23.11,22.65,32.37,35.59,0,null,"UP Augustus",104,114,7,87,"UP Augustus",117,83,24.88,22.65,33.33,35.59,0,null,"*U NscanEst",102,88,2,60,"*U NscanEst",93,175,22.27,0,40.48,0,0,null,"UP Augustus",84,76,2,150,"UP Augustus",100,50,27.1,22.65,26.92,35.59,0,null,"UP Augustus",88,62,6,156,"UP Augustus",29,22,43.78,22.65,28.21,35.59,0,null,"UP Augustus",99,117,18,78,"UP Augustus",10,33,38.22,22.65,31.73,35.59,0]
["P Twinscan",88,195,84,180,"P Twinscan",225,141,13.56,15.87,16.09,15.11,0,null,"P Twinscan",97,255,36,159,"P Twinscan",583,692,5.96,15.87,17.73,15.11,0,null,"P Twinscan",96,237,51,163,"P Twinscan",505,622,6.58,15.87,17.55,15.11,0,null,"P Twinscan",103,252,32,160,"P Twinscan",1631,1565,2.9,15.87,18.83,15.11,0,null,"P Twinscan",87,179,89,192,"P Twinscan",112,99,18.24,15.87,15.9,15.11,0,null,"P Twinscan",90,175,74,208,"P Twinscan",338,270,10.31,15.87,16.45,15.11,0,null,"P Twinscan",77,185,79,206,"P Twinscan",123,153,14.31,15.87,14.08,15.11,0,null,"P Twinscan",83,132,119,213,"P Twinscan",49,61,25.54,15.87,15.17,15.11,0,null,"P Twinscan",84,154,115,194,"P Twinscan",101,98,19.22,15.87,15.36,15.11,0,null,"P Twinscan",85,155,111,196,"P Twinscan",61,117,20.33,15.87,15.54,15.11,0,null,"P Twinscan",88,140,130,189,"P Twinscan",54,176,19.21,15.87,16.09,15.11,0,null,"P Twinscan",68,106,82,291,"P Twinscan",59,77,21.94,15.87,12.43,15.11,0,null,"P Twinscan",73,77,105,292,"P Twinscan",11,40,36.32,15.87,13.35,15.11,0,null,"P Twinscan",78,112,164,193,"P Twinscan",5,64,30.12,15.87,14.26,15.11,0]
["UP ExonHunter",53,109,4,641,"UP ExonHunter",305,182,8.17,10.48,6.57,6.33,0,null,"UP GeneMark",55,167,1,328,"UP GeneMark",677,728,3.38,6.93,9.98,3.24,0,null,"UP GeneZilla",54,167,5,251,"UP GeneZilla",645,594,3.7,9.09,11.32,8.84,0,null,"UP ExonHunter",61,112,0,634,"UP ExonHunter",1847,1531,1.72,10.48,7.56,6.33,0,null,"UP ExonHunter",48,105,2,652,"UP ExonHunter",198,126,10.06,10.48,5.95,6.33,0,null,"UP ExonHunter",52,96,3,656,"UP ExonHunter",467,258,5.96,10.48,6.44,6.33,0,null,"UP ExonHunter",44,106,5,652,"UP ExonHunter",224,164,8.18,10.48,5.45,6.33,0,null,"UP GeneMark",47,128,10,366,"UP GeneMark",82,68,14.46,6.93,8.53,3.24,0,null,"UP GeneMark",49,138,17,347,"UP GeneMark",147,103,11.21,6.93,8.89,3.24,0,null,"UP GeneMark",48,132,13,358,"UP GeneMark",105,133,11.48,6.93,8.71,3.24,0,null,"UP GeneMark",51,159,22,319,"UP GeneMark",87,161,11.14,6.93,9.26,3.24,0,null,"UP SGP2",45,90,7,410,"UP SGP2",101,74,14.52,9.71,8.15,8.44,0,null,"UP GeneMark",42,90,6,413,"UP GeneMark",26,43,20.9,6.93,7.62,3.24,0,null,"UP SGP2",46,121,19,366,"UP SGP2",23,69,17.76,9.71,8.33,8.44,0]
["UP GeneMark",50,149,6,346,"UP GeneMark",265,185,7.7,6.93,9.07,3.24,0,null,"UP ExonHunter",53,125,2,627,"UP ExonHunter",772,677,3.26,10.48,6.57,6.33,0,null,"UP ExonHunter",54,122,1,630,"UP ExonHunter",682,602,3.7,10.48,6.69,6.33,0,null,"UP GeneMark",60,159,4,328,"UP GeneMark",1732,1600,1.69,6.93,10.89,3.24,0,null,"UP GeneMark",47,137,7,360,"UP GeneMark",168,125,9.85,6.93,8.53,3.24,0,null,"UP GeneMark",47,132,7,365,"UP GeneMark",428,266,5.38,6.93,8.53,3.24,0,null,"UP SGP2",40,133,7,372,"UP SGP2",206,159,7.43,9.71,7.25,8.44,0,null,"UP ExonHunter",46,98,6,657,"UP ExonHunter",97,84,14.15,10.48,5.7,6.33,0,null,"UP SGP2",47,128,11,366,"UP SGP2",156,106,10.76,9.71,8.51,8.44,0,null,"UP ExonHunter",47,109,6,645,"UP ExonHunter",131,131,11.24,10.48,5.82,6.33,0,null,"UP SGP2",50,150,8,344,"UP SGP2",75,183,10.92,9.71,9.06,8.44,0,null,"UP ExonHunter",41,77,5,684,"UP ExonHunter",110,82,13.23,10.48,5.08,6.33,0,null,"UP ExonHunter",41,71,5,690,"UP ExonHunter",40,49,20.4,10.48,5.08,6.33,0,null,"UP ExonHunter",45,112,11,639,"UP ExonHunter",35,67,17.37,10.48,5.58,6.33,0]
["UP SGP2",49,138,6,359,"UP SGP2",294,168,7.55,9.71,8.88,8.44,0,null,"UP GeneZilla",51,170,4,252,"UP GeneZilla",723,683,3.13,9.09,10.69,8.84,0,null,"UP GeneMark",53,167,0,331,"UP GeneMark",615,625,3.63,6.93,9.62,3.24,0,null,"UP GeneZilla",56,160,2,259,"UP GeneZilla",1807,1528,1.58,9.09,11.74,8.84,0,null,"UP SGP2",47,134,3,368,"UP SGP2",168,128,9.85,9.71,8.51,8.44,0,null,"UP GeneZilla",46,139,6,286,"UP GeneZilla",476,212,5.27,9.09,9.64,8.84,0,null,"UP GeneZilla",39,152,4,282,"UP GeneZilla",213,134,7.25,9.09,8.18,8.84,0,null,"UP SGP2",45,124,10,373,"UP SGP2",85,71,13.85,9.71,8.15,8.44,0,null,"UP ExonHunter",47,112,7,641,"UP ExonHunter",164,114,10.76,10.48,5.82,6.33,0,null,"UP SGP2",45,131,9,367,"UP SGP2",113,129,10.77,9.71,8.15,8.44,0,null,"UP ExonHunter",49,128,8,622,"UP ExonHunter",94,187,10.7,10.48,6.07,6.33,0,null,"UP GeneZilla",35,107,8,327,"UP GeneZilla",91,77,11.29,9.09,7.34,8.84,0,null,"UP GeneZilla",39,99,10,329,"UP GeneZilla",24,39,19.4,9.09,8.18,8.84,0,null,"UP GeneMark",43,133,25,350,"UP GeneMark",18,65,16.6,6.93,7.8,3.24,0]
["UP GeneZilla",45,156,7,269,"UP GeneZilla",290,158,6.93,9.09,9.43,8.84,0,null,"UP SGP2",51,151,0,350,"UP SGP2",720,705,3.13,9.71,9.24,8.44,0,null,"UP SGP2",49,150,4,349,"UP SGP2",629,632,3.36,9.71,8.88,8.44,0,null,"UP SGP2",54,149,1,348,"UP SGP2",1822,1526,1.52,9.71,9.78,8.44,0,null,"UP GeneZilla",41,147,11,278,"UP GeneZilla",185,104,8.6,9.09,8.6,8.84,0,null,"UP SGP2",44,132,2,374,"UP SGP2",457,240,5.04,9.71,7.97,8.44,0,null,"UP Dogfish",36,82,1,85,"UP Dogfish",175,245,6.69,5.08,17.65,14.61,0,null,"UP GeneZilla",40,139,15,283,"UP GeneZilla",84,62,12.31,9.09,8.39,8.84,0,null,"UP GeneZilla",43,147,11,276,"UP GeneZilla",150,97,9.84,9.09,9.01,8.84,0,null,"UP GeneZilla",43,146,13,275,"UP GeneZilla",121,108,10.29,9.09,9.01,8.84,0,null,"UP GeneZilla",40,166,19,252,"UP GeneZilla",89,163,8.73,9.09,8.39,8.84,0,null,"UP GeneMark",35,98,6,412,"UP GeneMark",91,86,11.29,6.93,6.35,3.24,0,null,"UP SGP2",38,88,9,417,"UP SGP2",23,52,18.91,9.71,6.88,8.44,0,null,"UP GeneZilla",42,148,23,264,"UP GeneZilla",18,51,16.22,9.09,8.81,8.84,0]
["UP Dogfish",39,85,1,79,"UP Dogfish",237,288,6.01,5.08,19.12,14.61,0,null,"UP Dogfish",43,88,1,72,"UP Dogfish",626,870,2.64,5.08,21.08,14.61,0,null,"UP GeneID",41,132,0,94,"UP GeneID",655,632,2.81,5.39,15.36,10.69,0,null,"UP Dogfish",47,85,1,71,"UP Dogfish",1344,2075,1.32,5.08,23.04,14.61,0,null,"UP Dogfish",38,80,1,85,"UP Dogfish",172,187,7.97,5.08,18.63,14.61,0,null,"UP GeneID",37,111,0,119,"UP GeneID",488,237,4.24,5.39,13.86,10.69,0,null,"UP GeneMark",35,150,9,357,"UP GeneMark",195,158,6.51,6.93,6.35,3.24,0,null,"UP Dogfish",37,77,1,89,"UP Dogfish",73,138,11.38,5.08,18.14,14.61,0,null,"UP Dogfish",36,80,3,85,"UP Dogfish",118,203,8.24,5.08,17.65,14.61,0,null,"UP Dogfish",36,82,3,83,"UP Dogfish",101,199,8.61,5.08,17.65,14.61,0,null,"*UP GenScan",39,142,8,206,"*UP GenScan",86,191,8.52,7.4,9.87,10.13,0,null,"UP Dogfish",32,58,0,114,"UP Dogfish",86,134,10.32,5.08,15.69,14.61,0,null,"UP Dogfish",32,53,1,118,"UP Dogfish",32,84,15.92,5.08,15.69,14.61,0,null,"UP Dogfish",37,80,5,82,"UP Dogfish",25,117,14.29,5.08,18.14,14.61,0]
["UP GeneID",37,119,0,111,"UP GeneID",313,180,5.7,5.39,13.86,10.69,0,null,"UP GeneID",40,131,0,96,"UP GeneID",756,700,2.46,5.39,14.98,10.69,0,null,"UP Dogfish",41,91,1,71,"UP Dogfish",534,794,2.81,5.08,20.1,14.61,0,null,"*UP GenScan",46,134,1,214,"*UP GenScan",1733,1638,1.3,7.4,11.65,10.13,0,null,"*UP GenScan",35,112,3,245,"*UP GenScan",195,135,7.34,7.4,8.86,10.13,0,null,"UP Dogfish",37,76,3,88,"UP Dogfish",372,388,4.24,5.08,18.14,14.61,0,null,"UP GeneID",29,121,1,116,"UP GeneID",230,158,5.39,5.39,10.86,10.69,0,null,"UP GeneID",33,112,0,122,"UP GeneID",103,77,10.15,5.39,12.36,10.69,0,null,"UP GeneID",35,116,0,116,"UP GeneID",172,114,8.01,5.39,13.11,10.69,0,null,"UP GeneID",32,118,0,117,"UP GeneID",129,139,7.66,5.39,11.99,10.69,0,null,"UP GeneID",35,126,1,105,"UP GeneID",97,200,7.64,5.39,13.11,10.69,0,null,"*UP GenScan",30,93,3,269,"*UP GenScan",95,92,9.68,7.4,7.59,10.13,0,null,"UP GeneID",27,81,0,159,"UP GeneID",35,58,13.43,5.39,10.11,10.69,0,null,"*UP GenScan",36,116,8,235,"*UP GenScan",28,79,13.9,7.4,9.11,10.13,0]
["*UP GenScan",35,121,2,237,"*UP GenScan",295,198,5.39,7.4,8.86,10.13,0,null,"*UP GenScan",39,136,1,219,"*UP GenScan",760,692,2.4,7.4,9.87,10.13,0,null,"*UP GenScan",37,134,1,223,"*UP GenScan",645,644,2.53,7.4,9.37,10.13,0,null,"UP GeneID",43,126,0,98,"UP GeneID",1796,1586,1.21,5.39,16.1,10.69,0,null,"UP GeneID",33,115,0,119,"UP GeneID",203,126,6.92,5.39,12.36,10.69,0,null,"*UP GenScan",33,111,3,248,"*UP GenScan",452,277,3.78,7.4,8.35,10.13,0,null,"*UP GenScan",28,119,1,247,"*UP GenScan",204,187,5.2,7.4,7.09,10.13,0,null,"*UP GenScan",33,109,3,250,"*UP GenScan",85,98,10.15,7.4,8.35,10.13,0,null,"*UP GenScan",34,114,2,245,"*UP GenScan",151,138,7.78,7.4,8.61,10.13,0,null,"*UP GenScan",32,117,3,243,"*UP GenScan",121,148,7.66,7.4,8.1,10.13,0,null,"UP Dogfish",33,83,3,85,"UP Dogfish",64,278,7.21,5.08,16.18,14.61,0,null,"UP GeneID",28,92,0,147,"UP GeneID",104,86,9.03,5.39,10.49,10.69,0,null,"*UP GenScan",27,77,3,288,"*UP GenScan",31,66,13.43,7.4,6.84,10.13,0,null,"UP GeneID",33,119,5,110,"UP GeneID",38,69,12.74,5.39,12.36,10.69,0]
["UP Saga",21,111,5,194,"UP Saga",247,270,3.24,2.16,6.34,3.44,0,null,"UP Saga",21,125,1,184,"UP Saga",546,935,1.29,2.16,6.34,3.44,0,null,"UP Saga",22,116,3,190,"UP Saga",501,821,1.51,2.16,6.65,3.44,0,null,"UP Saga",24,115,0,192,"UP Saga",1506,1906,0.68,2.16,7.25,3.44,0,null,"UP Saga",21,98,8,204,"UP Saga",142,216,4.4,2.16,6.34,3.44,0,null,"UP Saga",19,102,3,207,"UP Saga",402,350,2.18,2.16,5.74,3.44,0,null,"UP Saga",16,108,5,202,"UP Saga",175,239,2.97,2.16,4.83,3.44,0,null,"UP Saga",20,97,11,203,"UP Saga",67,141,6.15,2.16,6.04,3.44,0,null,"UP Saga",19,99,11,202,"UP Saga",109,210,4.35,2.16,5.74,3.44,0,null,"UP Saga",20,108,4,199,"UP Saga",90,200,4.78,2.16,6.04,3.44,0,null,"UP Saga",19,100,11,201,"UP Saga",60,279,4.15,2.16,5.74,3.44,0,null,"UP Saga",16,72,3,240,"UP Saga",73,149,5.16,2.16,4.83,3.44,0,null,"UP Saga",17,67,5,242,"UP Saga",23,94,8.46,2.16,5.14,3.44,0,null,"UP Saga",16,98,14,203,"UP Saga",15,130,6.18,2.16,4.83,3.44,0]
[]
[]
["There are 8363 unique introns among the 22579 introns in new gene",{"$nulls":13},"There are 6957 unique introns among the 13850 introns in new gene",{"$nulls":13},"There are 7189 unique introns among the 14379 introns in new gene",{"$nulls":13},"There are 7130 unique introns among the 12956 introns in new gene",{"$nulls":13},"There are 9053 unique introns among the 26624 introns in new gene",{"$nulls":13},"There are 8957 unique introns among the 25023 introns in new gene",{"$nulls":13},"There are 8706 unique introns among the 23823 introns in new gene",{"$nulls":13},"There are 9385 unique introns among the 30180 introns in new gene",{"$nulls":13},"There are 8923 unique introns among the 29504 introns in new gene",{"$nulls":13},"There are 8612 unique introns among the 27400 introns in new gene",{"$nulls":13},"There are 7988 unique introns among the 29313 introns in new gene",{"$nulls":13},"There are 11007 unique introns among the 47920 introns in new gene",{"$nulls":13},"There are 11414 unique introns among the 53291 introns in new gene",{"$nulls":13},"There are 8612 unique introns among the 28704 introns in new gene"]
[]
[]
[]
[]
["Analysis of the Start and Stop among CDS with the same intron structure as the reference",{"$nulls":13},"Analysis of the Start and Stop among CDS with the same intron structure as the reference",{"$nulls":139},"Analysis of the Start and Stop among CDS with the same intron structure as the reference",{"$nulls":13},"Analysis of the Start and Stop among CDS with the same intron structure as the reference"]
[]
["Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate",{"$nulls":6},"Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate",{"$nulls":132},"Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate",{"$nulls":6},"Program","Same Start and End","Different start","Different end","Different start and end","Elsewhere","Reference CDS model with same intron structure","Rate"]
["Gencode",607,0,0,0,0,607,0,{"$nulls":6},"*AceView",0,0,0,0,0,0,0,{"$nulls":132},"*MGC",296,0,0,0,0,296,0,{"$nulls":6},"*P CCDS",201,0,0,0,0,201,0]
["*ECgene",439,14,9,3,0,465,2.58,{"$nulls":6},"AceView",0,0,0,0,0,0,0,{"$nulls":132},"*ECgene",208,7,8,0,0,223,3.59,{"$nulls":6},"*Ensembl",199,2,0,0,0,201,0]
["AceView",328,97,13,6,0,444,4.28,{"$nulls":6},"*ECgene",0,0,0,0,0,0,0,{"$nulls":132},"*KnownGene",192,3,3,0,0,198,1.52,{"$nulls":6},"Ensembl",194,3,4,0,0,201,1.99]
["*AceView",298,119,12,6,0,435,4.14,{"$nulls":6},"Gencode",0,0,0,0,0,0,0,{"$nulls":132},"Pairagon",186,1,6,0,0,193,3.11,{"$nulls":6},"*RefSeq",195,2,0,0,0,197,0]
["*KnownGene",309,12,6,0,0,327,1.83,{"$nulls":6},"*ExonWalk",0,0,0,0,0,0,0,{"$nulls":132},"AceView",151,24,14,0,0,189,7.41,{"$nulls":6},"*KnownGene",186,3,0,0,0,189,0]
["*ExonWalk",243,39,28,9,0,319,11.6,{"$nulls":6},"*KnownGene",0,0,0,0,0,0,0,{"$nulls":132},"Gencode",172,2,12,0,0,186,6.45,{"$nulls":6},"*ECgene",180,5,3,0,0,188,1.6]
["Exogean",276,5,20,2,0,303,7.26,{"$nulls":6},"Exogean",0,0,0,0,0,0,0,{"$nulls":132},"*AceView",135,38,19,0,0,192,9.9,{"$nulls":6},"Pairagon",181,2,4,0,0,187,2.14]
["Pairagon",250,8,8,1,0,267,3.37,{"$nulls":6},"Pairagon",0,0,0,0,0,0,0,{"$nulls":132},"*ExonWalk",148,13,14,0,0,175,8,{"$nulls":6},"Gencode",178,3,1,0,0,182,0.55]
["*RefSeq",248,7,7,1,0,263,3.04,{"$nulls":6},"*RefSeq",0,0,0,0,0,0,0,{"$nulls":132},"*RefSeq",150,1,8,0,0,159,5.03,{"$nulls":6},"*AceView",144,32,8,0,0,184,4.35]
["*Ensembl",236,8,10,1,0,255,4.31,{"$nulls":6},"Ensembl",0,0,0,0,0,0,0,{"$nulls":132},"*Ensembl",136,1,12,0,0,149,8.05,{"$nulls":6},"AceView",148,23,9,0,0,180,5]
["Ensembl",236,7,10,2,0,255,4.71,{"$nulls":6},"*Ensembl",0,0,0,0,0,0,0,{"$nulls":132},"Ensembl",134,2,13,0,0,149,8.72,{"$nulls":6},"Fgenesh",158,1,5,0,0,164,3.05]
["Fgenesh",193,9,10,2,0,214,5.61,{"$nulls":6},"Fgenesh",0,0,0,0,0,0,0,{"$nulls":132},"Exogean",129,3,14,0,0,146,9.59,{"$nulls":6},"*ExonWalk",132,15,6,0,0,153,3.92]
["*MGC",179,3,11,0,0,193,5.7,{"$nulls":6},"*MGC",0,0,0,0,0,0,0,{"$nulls":132},"Fgenesh",123,1,8,0,0,132,6.06,{"$nulls":6},"Exogean",139,3,10,0,0,152,6.58]
["*P CCDS",176,5,1,0,0,182,0.55,{"$nulls":6},"*P CCDS",0,0,0,0,0,0,0,{"$nulls":132},"UP Jigsaw",118,1,10,0,0,129,7.75,{"$nulls":6},"UP Jigsaw",132,1,5,0,0,138,3.62]
["UP Jigsaw",168,4,5,1,0,178,3.37,{"$nulls":6},"UP Jigsaw",0,0,0,0,0,0,0,{"$nulls":132},"*P CCDS",115,0,8,0,0,123,6.5,{"$nulls":6},"*MGC",119,0,9,0,0,128,7.03]
["*U NscanEst",98,12,6,0,0,116,5.17,{"$nulls":6},"*U NscanEst",0,0,0,0,0,0,0,{"$nulls":132},"UP Augustus",76,1,3,0,0,80,3.75,{"$nulls":6},"*U NscanEst",89,2,7,0,0,98,7.14]
["UP Augustus",105,4,1,0,0,110,0.91,{"$nulls":6},"UP Augustus",0,0,0,0,0,0,0,{"$nulls":132},"*U NscanEst",71,2,11,0,0,84,13.1,{"$nulls":6},"UP Augustus",85,2,1,0,0,88,1.14]
["P Twinscan",69,10,8,1,0,88,10.23,{"$nulls":6},"P Twinscan",0,0,0,0,0,0,0,{"$nulls":132},"P Twinscan",54,6,6,0,0,66,9.09,{"$nulls":6},"P Twinscan",62,7,4,0,0,73,5.48]
["UP ExonHunter",41,2,8,1,0,52,17.31,{"$nulls":6},"UP GeneMark",0,0,0,0,0,0,0,{"$nulls":132},"UP SGP2",36,1,6,0,0,43,13.95,{"$nulls":6},"UP GeneMark",34,4,4,0,0,42,9.52]
["UP GeneMark",37,4,5,4,0,50,18,{"$nulls":6},"UP ExonHunter",0,0,0,0,0,0,0,{"$nulls":132},"UP ExonHunter",29,2,9,0,0,40,22.5,{"$nulls":6},"UP SGP2",36,1,1,0,0,38,2.63]
["UP SGP2",41,0,7,1,0,49,16.33,{"$nulls":6},"UP GeneZilla",0,0,0,0,0,0,0,{"$nulls":132},"UP GeneZilla",30,1,3,0,0,34,8.82,{"$nulls":6},"UP ExonHunter",34,2,5,0,0,41,12.2]
["UP GeneZilla",33,6,5,1,0,45,13.33,{"$nulls":6},"UP SGP2",0,0,0,0,0,0,0,{"$nulls":132},"UP GeneMark",25,4,3,0,0,32,9.38,{"$nulls":6},"UP GeneZilla",34,1,4,0,0,39,10.26]
["UP Dogfish",30,5,2,2,0,39,10.26,{"$nulls":6},"UP Dogfish",0,0,0,0,0,0,0,{"$nulls":132},"UP Dogfish",26,2,2,0,0,30,6.67,{"$nulls":6},"UP Dogfish",28,3,1,0,0,32,3.12]
["UP GeneID",26,4,7,0,0,37,18.92,{"$nulls":6},"UP GeneID",0,0,0,0,0,0,0,{"$nulls":132},"*UP GenScan",23,0,5,0,0,28,17.86,{"$nulls":6},"UP GeneID",22,2,3,0,0,27,11.11]
["*UP GenScan",27,1,5,1,0,34,17.65,{"$nulls":6},"*UP GenScan",0,0,0,0,0,0,0,{"$nulls":132},"UP GeneID",21,1,4,0,0,26,15.38,{"$nulls":6},"*UP GenScan",23,0,4,0,0,27,14.81]
["UP Saga",11,2,6,2,0,21,38.1,{"$nulls":6},"UP Saga",0,0,0,0,0,0,0,{"$nulls":132},"UP Saga",10,0,6,0,0,16,37.5,{"$nulls":6},"UP Saga",12,0,5,0,0,17,29.41]
[]
["Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron",{"$nulls":13},"Analysis of the transcripts without intron"]
["Program","Intronless transcript also found in Gencode","New intronless transcript in Gencode gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *AceView","New intronless transcript in *AceView gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in AceView","New intronless transcript in AceView gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *ECgene","New intronless transcript in *ECgene gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *KnownGene","New intronless transcript in *KnownGene gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *ExonWalk","New intronless transcript in *ExonWalk gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Exogean","New intronless transcript in Exogean gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *RefSeq","New intronless transcript in *RefSeq gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Pairagon","New intronless transcript in Pairagon gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *Ensembl","New intronless transcript in *Ensembl gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in Fgenesh","New intronless transcript in Fgenesh gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *MGC","New intronless transcript in *MGC gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in *P CCDS","New intronless transcript in *P CCDS gene","New intronless transcript in new gene",{"$nulls":10},"Program","Intronless transcript also found in UP Jigsaw","New intronless transcript in UP Jigsaw gene","New intronless transcript in new gene"]
["Gencode",74,0,0,{"$nulls":10},"*AceView",1058,0,0,{"$nulls":10},"AceView",194,0,0,{"$nulls":10},"*ECgene",2854,0,0,{"$nulls":10},"*KnownGene",77,0,0,{"$nulls":10},"*ExonWalk",22,0,0,{"$nulls":10},"Exogean",18,0,0,{"$nulls":10},"*RefSeq",57,0,0,{"$nulls":10},"Pairagon",71,0,0,{"$nulls":10},"*Ensembl",67,0,0,{"$nulls":10},"Fgenesh",101,0,0,{"$nulls":10},"*MGC",32,0,1,{"$nulls":10},"*P CCDS",14,0,0,{"$nulls":10},"UP Jigsaw",67,0,0]
["*AceView",61,235,762,{"$nulls":10},"*ECgene",572,283,1999,{"$nulls":10},"*AceView",123,225,710,{"$nulls":10},"*AceView",572,141,345,{"$nulls":10},"*AceView",61,226,771,{"$nulls":10},"*ECgene",18,326,2510,{"$nulls":10},"*AceView",14,227,817,{"$nulls":10},"*AceView",53,216,789,{"$nulls":10},"*AceView",41,225,792,{"$nulls":10},"Ensembl",65,0,0,{"$nulls":10},"*ECgene",58,315,2481,{"$nulls":10},"*ECgene",24,247,2583,{"$nulls":10},"*KnownGene",14,7,56,{"$nulls":10},"*ECgene",51,326,2477]
["*ECgene",56,352,2446,{"$nulls":10},"AceView",123,41,30,{"$nulls":10},"*ECgene",98,328,2428,{"$nulls":10},"AceView",97,43,54,{"$nulls":10},"*ECgene",56,352,2446,{"$nulls":10},"*AceView",15,217,826,{"$nulls":10},"AceView",14,64,116,{"$nulls":10},"*KnownGene",51,11,15,{"$nulls":10},"*ECgene",40,304,2510,{"$nulls":10},"UP Jigsaw",49,10,8,{"$nulls":10},"UP Augustus",56,17,14,{"$nulls":10},"*AceView",22,164,872,{"$nulls":10},"*RefSeq",14,4,39,{"$nulls":10},"UP Augustus",51,9,27]
["*RefSeq",49,0,8,{"$nulls":10},"Gencode",62,10,2,{"$nulls":10},"Gencode",27,14,33,{"$nulls":10},"Gencode",55,14,5,{"$nulls":10},"*RefSeq",51,3,3,{"$nulls":10},"AceView",14,57,123,{"$nulls":10},"*ECgene",13,295,2546,{"$nulls":10},"*ECgene",49,323,2482,{"$nulls":10},"*RefSeq",40,10,7,{"$nulls":10},"*ECgene",46,326,2482,{"$nulls":10},"P Twinscan",55,30,23,{"$nulls":10},"*KnownGene",20,6,51,{"$nulls":10},"*Ensembl",14,2,51,{"$nulls":10},"*KnownGene",50,15,12]
["*KnownGene",46,11,20,{"$nulls":10},"*KnownGene",61,8,8,{"$nulls":10},"*KnownGene",26,7,44,{"$nulls":10},"*KnownGene",55,9,13,{"$nulls":10},"UP Jigsaw",50,1,16,{"$nulls":10},"Gencode",14,16,44,{"$nulls":10},"Gencode",12,27,35,{"$nulls":10},"Gencode",48,21,5,{"$nulls":10},"*U NscanEst",39,1,9,{"$nulls":10},"*KnownGene",45,17,15,{"$nulls":10},"*AceView",48,237,773,{"$nulls":10},"*RefSeq",19,3,35,{"$nulls":10},"UP Jigsaw",14,1,52,{"$nulls":10},"*Ensembl",49,3,15]
["UP Jigsaw",45,1,21,{"$nulls":10},"*RefSeq",53,0,4,{"$nulls":10},"*RefSeq",23,1,33,{"$nulls":10},"Fgenesh",55,6,40,{"$nulls":10},"Gencode",46,23,5,{"$nulls":10},"*RefSeq",12,1,44,{"$nulls":10},"*KnownGene",10,14,53,{"$nulls":10},"UP Jigsaw",47,1,19,{"$nulls":10},"*KnownGene",38,17,22,{"$nulls":10},"UP Augustus",44,16,27,{"$nulls":10},"UP Jigsaw",47,10,10,{"$nulls":10},"*Ensembl",18,1,48,{"$nulls":10},"*ECgene",13,229,2612,{"$nulls":10},"*AceView",48,240,770]
["Fgenesh",43,4,54,{"$nulls":10},"P Twinscan",48,17,43,{"$nulls":10},"*Ensembl",19,3,45,{"$nulls":10},"P Twinscan",50,20,38,{"$nulls":10},"*Ensembl",45,5,17,{"$nulls":10},"*KnownGene",11,5,61,{"$nulls":10},"*RefSeq",10,9,38,{"$nulls":10},"UP Augustus",43,6,38,{"$nulls":10},"P Twinscan",37,28,43,{"$nulls":10},"Fgenesh",44,7,50,{"$nulls":10},"UP ExonHunter",44,6,170,{"$nulls":10},"AceView",17,55,122,{"$nulls":10},"*AceView",13,154,891,{"$nulls":10},"Ensembl",48,3,14]
["UP Augustus",42,6,39,{"$nulls":10},"Fgenesh",48,5,48,{"$nulls":10},"P Twinscan",18,14,76,{"$nulls":10},"UP Jigsaw",50,7,10,{"$nulls":10},"UP Augustus",43,7,37,{"$nulls":10},"Ensembl",10,3,52,{"$nulls":10},"*Ensembl",10,9,48,{"$nulls":10},"Fgenesh",43,2,56,{"$nulls":10},"Fgenesh",37,13,51,{"$nulls":10},"*AceView",42,236,780,{"$nulls":10},"*Ensembl",44,5,18,{"$nulls":10},"Gencode",17,20,37,{"$nulls":10},"Pairagon",13,3,55,{"$nulls":10},"Fgenesh",47,7,47]
["P Twinscan",41,20,47,{"$nulls":10},"UP Jigsaw",48,0,19,{"$nulls":10},"Pairagon",18,3,50,{"$nulls":10},"UP Augustus",49,10,28,{"$nulls":10},"Ensembl",43,5,17,{"$nulls":10},"*Ensembl",10,3,54,{"$nulls":10},"Fgenesh",10,9,82,{"$nulls":10},"*Ensembl",41,3,23,{"$nulls":10},"Gencode",34,29,11,{"$nulls":10},"*RefSeq",41,8,8,{"$nulls":10},"Gencode",43,25,6,{"$nulls":10},"Pairagon",17,1,53,{"$nulls":10},"Ensembl",13,2,50,{"$nulls":10},"*RefSeq",47,5,5]
["*Ensembl",40,3,24,{"$nulls":10},"UP Augustus",46,7,34,{"$nulls":10},"Ensembl",18,3,44,{"$nulls":10},"*RefSeq",49,2,6,{"$nulls":10},"Fgenesh",43,2,56,{"$nulls":10},"Pairagon",10,2,59,{"$nulls":10},"*MGC",10,4,18,{"$nulls":10},"P Twinscan",40,19,49,{"$nulls":10},"UP Jigsaw",34,9,24,{"$nulls":10},"Gencode",39,29,6,{"$nulls":10},"*KnownGene",43,11,23,{"$nulls":10},"Ensembl",17,1,47,{"$nulls":10},"Gencode",12,23,39,{"$nulls":10},"Gencode",44,26,4]
["Ensembl",38,3,24,{"$nulls":10},"*Ensembl",42,5,20,{"$nulls":10},"*MGC",17,6,9,{"$nulls":10},"UP GeneZilla",44,10,125,{"$nulls":10},"P Twinscan",39,18,51,{"$nulls":10},"UP ExonHunter",9,13,198,{"$nulls":10},"P Twinscan",9,20,79,{"$nulls":10},"Pairagon",40,3,28,{"$nulls":10},"UP Augustus",32,20,35,{"$nulls":10},"P Twinscan",38,27,43,{"$nulls":10},"*RefSeq",43,6,8,{"$nulls":10},"UP Jigsaw",17,0,50,{"$nulls":10},"Fgenesh",12,0,89,{"$nulls":10},"P Twinscan",42,22,44]
["Pairagon",35,2,34,{"$nulls":10},"Pairagon",42,1,28,{"$nulls":10},"Fgenesh",17,5,79,{"$nulls":10},"*Ensembl",44,5,18,{"$nulls":10},"Pairagon",38,3,30,{"$nulls":10},"P Twinscan",8,14,86,{"$nulls":10},"Ensembl",9,9,47,{"$nulls":10},"Ensembl",39,3,23,{"$nulls":10},"*Ensembl",31,8,28,{"$nulls":10},"Pairagon",31,9,31,{"$nulls":10},"Ensembl",43,5,17,{"$nulls":10},"Fgenesh",14,1,86,{"$nulls":10},"AceView",11,51,132,{"$nulls":10},"UP GeneZilla",37,6,136]
["UP ExonHunter",33,12,175,{"$nulls":10},"Ensembl",40,5,20,{"$nulls":10},"UP Jigsaw",16,2,49,{"$nulls":10},"Ensembl",42,5,18,{"$nulls":10},"UP ExonHunter",31,14,175,{"$nulls":10},"UP Augustus",8,6,73,{"$nulls":10},"UP Jigsaw",9,9,49,{"$nulls":10},"UP GeneZilla",30,8,141,{"$nulls":10},"Ensembl",29,8,28,{"$nulls":10},"UP GeneZilla",28,16,135,{"$nulls":10},"UP GeneZilla",42,16,121,{"$nulls":10},"UP Augustus",13,6,68,{"$nulls":10},"P Twinscan",11,11,86,{"$nulls":10},"Pairagon",34,6,31]
["UP GeneZilla",33,8,138,{"$nulls":10},"UP GeneZilla",39,7,133,{"$nulls":10},"UP Augustus",14,7,66,{"$nulls":10},"UP ExonHunter",40,16,164,{"$nulls":10},"UP GeneZilla",30,8,141,{"$nulls":10},"*MGC",8,3,21,{"$nulls":10},"Pairagon",9,7,55,{"$nulls":10},"UP ExonHunter",30,3,187,{"$nulls":10},"UP ExonHunter",25,7,188,{"$nulls":10},"UP ExonHunter",28,7,185,{"$nulls":10},"Pairagon",37,7,27,{"$nulls":10},"P Twinscan",12,10,86,{"$nulls":10},"*MGC",11,5,16,{"$nulls":10},"UP ExonHunter",34,3,183]
["AceView",28,61,105,{"$nulls":10},"UP ExonHunter",33,7,180,{"$nulls":10},"Exogean",14,2,2,{"$nulls":10},"Pairagon",40,3,28,{"$nulls":10},"AceView",27,62,105,{"$nulls":10},"Fgenesh",8,3,90,{"$nulls":10},"UP Augustus",8,16,63,{"$nulls":10},"AceView",23,61,110,{"$nulls":10},"UP GeneZilla",24,11,144,{"$nulls":10},"UP GeneMark",21,8,52,{"$nulls":10},"*UP GenScan",34,2,23,{"$nulls":10},"*P CCDS",11,0,3,{"$nulls":10},"UP Augustus",11,5,71,{"$nulls":10},"UP SGP2",28,6,125]
["UP SGP2",25,13,121,{"$nulls":10},"*UP GenScan",27,2,30,{"$nulls":10},"*ExonWalk",13,7,2,{"$nulls":10},"UP SGP2",36,18,105,{"$nulls":10},"*UP GenScan",23,1,35,{"$nulls":10},"Exogean",8,1,9,{"$nulls":10},"*ExonWalk",8,9,5,{"$nulls":10},"*UP GenScan",23,1,35,{"$nulls":10},"UP SGP2",21,7,131,{"$nulls":10},"UP SGP2",20,14,125,{"$nulls":10},"UP GeneMark",32,8,41,{"$nulls":10},"Exogean",10,1,7,{"$nulls":10},"*U NscanEst",10,0,39,{"$nulls":10},"*UP GenScan",25,2,32]
["UP GeneMark",25,1,55,{"$nulls":10},"UP GeneMark",26,1,54,{"$nulls":10},"UP GeneZilla",12,7,160,{"$nulls":10},"*UP GenScan",31,0,28,{"$nulls":10},"UP SGP2",22,14,123,{"$nulls":10},"UP Jigsaw",8,1,58,{"$nulls":10},"UP GeneZilla",7,12,160,{"$nulls":10},"UP SGP2",22,6,131,{"$nulls":10},"AceView",18,69,107,{"$nulls":10},"AceView",19,72,103,{"$nulls":10},"UP SGP2",31,8,120,{"$nulls":10},"*U NscanEst",10,1,38,{"$nulls":10},"UP GeneZilla",9,4,166,{"$nulls":10},"UP GeneMark",24,3,54]
["*UP GenScan",25,1,33,{"$nulls":10},"UP SGP2",25,9,125,{"$nulls":10},"*U NscanEst",11,3,35,{"$nulls":10},"UP GeneMark",30,2,49,{"$nulls":10},"UP GeneMark",22,1,58,{"$nulls":10},"UP GeneZilla",7,7,165,{"$nulls":10},"UP ExonHunter",7,10,203,{"$nulls":10},"UP GeneMark",22,1,58,{"$nulls":10},"*MGC",17,8,7,{"$nulls":10},"*MGC",18,9,5,{"$nulls":10},"*U NscanEst",23,3,23,{"$nulls":10},"UP ExonHunter",9,1,210,{"$nulls":10},"UP ExonHunter",8,1,211,{"$nulls":10},"*U NscanEst",18,3,28]
["*U NscanEst",18,2,29,{"$nulls":10},"*MGC",22,5,5,{"$nulls":10},"*P CCDS",11,1,2,{"$nulls":10},"*MGC",24,5,3,{"$nulls":10},"*MGC",20,8,4,{"$nulls":10},"*P CCDS",7,0,7,{"$nulls":10},"*U NscanEst",7,5,37,{"$nulls":10},"*MGC",19,10,3,{"$nulls":10},"UP GeneMark",16,8,57,{"$nulls":10},"*UP GenScan",18,6,35,{"$nulls":10},"UP GeneID",21,9,21,{"$nulls":10},"*ExonWalk",8,5,9,{"$nulls":10},"Exogean",7,3,8,{"$nulls":10},"*MGC",17,9,6]
["*MGC",17,4,11,{"$nulls":10},"*U NscanEst",21,3,25,{"$nulls":10},"UP ExonHunter",10,6,204,{"$nulls":10},"*U NscanEst",22,4,23,{"$nulls":10},"*U NscanEst",18,2,29,{"$nulls":10},"*U NscanEst",6,1,42,{"$nulls":10},"*P CCDS",7,0,7,{"$nulls":10},"*U NscanEst",18,2,29,{"$nulls":10},"*UP GenScan",16,6,37,{"$nulls":10},"*U NscanEst",15,8,26,{"$nulls":10},"AceView",17,70,107,{"$nulls":10},"UP GeneZilla",8,3,168,{"$nulls":10},"*ExonWalk",6,10,6,{"$nulls":10},"AceView",16,73,105]
["*ExonWalk",14,8,0,{"$nulls":10},"*ExonWalk",15,7,0,{"$nulls":10},"UP GeneMark",10,1,70,{"$nulls":10},"*ExonWalk",18,3,1,{"$nulls":10},"*P CCDS",14,0,0,{"$nulls":10},"UP SGP2",5,11,143,{"$nulls":10},"UP SGP2",3,9,147,{"$nulls":10},"*P CCDS",14,0,0,{"$nulls":10},"*P CCDS",13,1,0,{"$nulls":10},"*P CCDS",14,0,0,{"$nulls":10},"*MGC",14,8,10,{"$nulls":10},"UP GeneMark",6,1,74,{"$nulls":10},"UP GeneMark",5,1,75,{"$nulls":10},"UP GeneID",14,5,32]
["*P CCDS",13,0,1,{"$nulls":10},"Exogean",14,1,3,{"$nulls":10},"*UP GenScan",7,2,50,{"$nulls":10},"UP GeneID",16,6,29,{"$nulls":10},"*ExonWalk",10,11,1,{"$nulls":10},"UP GeneMark",4,1,76,{"$nulls":10},"UP GeneMark",3,8,70,{"$nulls":10},"*ExonWalk",11,8,3,{"$nulls":10},"*ExonWalk",9,11,2,{"$nulls":10},"UP GeneID",11,8,32,{"$nulls":10},"*P CCDS",12,0,2,{"$nulls":10},"UP GeneID",4,2,45,{"$nulls":10},"UP GeneID",3,3,45,{"$nulls":10},"*P CCDS",14,0,0]
["Exogean",12,1,5,{"$nulls":10},"*P CCDS",13,0,1,{"$nulls":10},"UP SGP2",5,4,150,{"$nulls":10},"Exogean",13,1,4,{"$nulls":10},"Exogean",10,3,5,{"$nulls":10},"UP GeneID",3,3,45,{"$nulls":10},"*UP GenScan",2,8,49,{"$nulls":10},"Exogean",10,3,5,{"$nulls":10},"UP GeneID",9,6,36,{"$nulls":10},"Exogean",10,3,5,{"$nulls":10},"Exogean",10,4,4,{"$nulls":10},"*UP GenScan",4,0,55,{"$nulls":10},"UP SGP2",3,1,155,{"$nulls":10},"Exogean",9,4,5]
["UP GeneID",10,4,37,{"$nulls":10},"UP GeneID",11,4,36,{"$nulls":10},"UP GeneID",4,4,43,{"$nulls":10},"*P CCDS",13,0,1,{"$nulls":10},"UP GeneID",9,4,38,{"$nulls":10},"UP Saga",3,1,43,{"$nulls":10},"UP GeneID",2,7,42,{"$nulls":10},"UP GeneID",10,3,38,{"$nulls":10},"Exogean",9,3,6,{"$nulls":10},"*ExonWalk",9,11,2,{"$nulls":10},"*ExonWalk",8,12,2,{"$nulls":10},"UP Saga",2,0,45,{"$nulls":10},"*UP GenScan",3,0,56,{"$nulls":10},"*ExonWalk",7,13,2]
["UP Saga",6,1,40,{"$nulls":10},"UP Saga",8,1,38,{"$nulls":10},"UP Saga",2,1,44,{"$nulls":10},"UP Saga",11,2,34,{"$nulls":10},"UP Saga",5,1,41,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Saga",2,1,44,{"$nulls":10},"UP Saga",5,1,41,{"$nulls":10},"UP Saga",4,2,41,{"$nulls":10},"UP Saga",4,2,41,{"$nulls":10},"UP Saga",5,3,39,{"$nulls":10},"UP SGP2",1,3,155,{"$nulls":10},"UP Saga",2,0,45,{"$nulls":10},"UP Saga",5,2,40]
["UP Dogfish",3,2,10,{"$nulls":10},"UP Dogfish",3,2,10,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"UP Dogfish",4,2,9,{"$nulls":10},"UP Dogfish",3,2,10,{"$nulls":10},"*UP GenScan",2,0,57,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",1,3,11,{"$nulls":10},"UP Dogfish",2,2,11,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"UP Dogfish",0,2,13,{"$nulls":10},"UP Dogfish",1,2,12]
[]
["Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns",{"$nulls":13},"Analysis of the introns"]
["Program","Correct intron in transcript exact or similar to Gencode","Different intron in transcript exact or similar to Gencode","Intron in additional variant","Intron in new gene","Missed intron in touched Gencode gene","Missed intron in missed Gencode gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *AceView","Different intron in transcript exact or similar to *AceView","Intron in additional variant","Intron in new gene","Missed intron in touched *AceView gene","Missed intron in missed *AceView gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to AceView","Different intron in transcript exact or similar to AceView","Intron in additional variant","Intron in new gene","Missed intron in touched AceView gene","Missed intron in missed AceView gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *ECgene","Different intron in transcript exact or similar to *ECgene","Intron in additional variant","Intron in new gene","Missed intron in touched *ECgene gene","Missed intron in missed *ECgene gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *KnownGene","Different intron in transcript exact or similar to *KnownGene","Intron in additional variant","Intron in new gene","Missed intron in touched *KnownGene gene","Missed intron in missed *KnownGene gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *ExonWalk","Different intron in transcript exact or similar to *ExonWalk","Intron in additional variant","Intron in new gene","Missed intron in touched *ExonWalk gene","Missed intron in missed *ExonWalk gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Exogean","Different intron in transcript exact or similar to Exogean","Intron in additional variant","Intron in new gene","Missed intron in touched Exogean gene","Missed intron in missed Exogean gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *RefSeq","Different intron in transcript exact or similar to *RefSeq","Intron in additional variant","Intron in new gene","Missed intron in touched *RefSeq gene","Missed intron in missed *RefSeq gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Pairagon","Different intron in transcript exact or similar to Pairagon","Intron in additional variant","Intron in new gene","Missed intron in touched Pairagon gene","Missed intron in missed Pairagon gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *Ensembl","Different intron in transcript exact or similar to *Ensembl","Intron in additional variant","Intron in new gene","Missed intron in touched *Ensembl gene","Missed intron in missed *Ensembl gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to Fgenesh","Different intron in transcript exact or similar to Fgenesh","Intron in additional variant","Intron in new gene","Missed intron in touched Fgenesh gene","Missed intron in missed Fgenesh gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *MGC","Different intron in transcript exact or similar to *MGC","Intron in additional variant","Intron in new gene","Missed intron in touched *MGC gene","Missed intron in missed *MGC gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to *P CCDS","Different intron in transcript exact or similar to *P CCDS","Intron in additional variant","Intron in new gene","Missed intron in touched *P CCDS gene","Missed intron in missed *P CCDS gene",{"$nulls":7},"Program","Correct intron in transcript exact or similar to UP Jigsaw","Different intron in transcript exact or similar to UP Jigsaw","Intron in additional variant","Intron in new gene","Missed intron in touched UP Jigsaw gene","Missed intron in missed UP Jigsaw gene"]
["Gencode",5168,0,0,0,0,0,{"$nulls":7},"*AceView",8125,0,0,0,0,0,{"$nulls":7},"AceView",7678,0,0,0,0,0,{"$nulls":7},"*ECgene",24533,0,0,0,0,0,{"$nulls":7},"*KnownGene",3929,0,0,0,0,0,{"$nulls":7},"*ExonWalk",7205,0,0,0,0,0,{"$nulls":7},"Exogean",4827,0,0,0,0,0,{"$nulls":7},"*RefSeq",2658,0,0,0,0,0,{"$nulls":7},"Pairagon",3145,0,0,0,0,0,{"$nulls":7},"*Ensembl",3261,0,0,0,0,0,{"$nulls":7},"Fgenesh",3063,0,0,0,0,0,{"$nulls":7},"*MGC",1909,0,0,0,0,0,{"$nulls":7},"*P CCDS",1508,0,0,0,0,0,{"$nulls":7},"UP Jigsaw",2168,0,0,0,0,0]
["*ECgene",4288,605,13404,6236,760,120,{"$nulls":7},"AceView",6331,371,611,365,1409,385,{"$nulls":7},"*AceView",6331,420,918,456,1063,284,{"$nulls":7},"AceView",5797,851,318,712,16005,2731,{"$nulls":7},"*ECgene",3408,288,13443,7394,461,60,{"$nulls":7},"*ECgene",5392,762,12947,5432,1603,210,{"$nulls":7},"*ECgene",3779,490,15171,5093,957,91,{"$nulls":7},"*ECgene",2443,124,14360,7606,184,31,{"$nulls":7},"*ECgene",2684,222,13663,7964,409,52,{"$nulls":7},"Ensembl",3260,0,0,0,1,0,{"$nulls":7},"*ECgene",2024,332,14364,7813,563,476,{"$nulls":7},"*ECgene",1627,130,11508,11268,251,31,{"$nulls":7},"*Ensembl",1508,0,495,1258,0,0,{"$nulls":7},"*ECgene",1703,130,14844,7856,369,96]
["AceView",4139,314,1692,1533,873,156,{"$nulls":7},"*ECgene",5738,1867,14339,2589,2013,374,{"$nulls":7},"*ECgene",5797,1629,14153,2954,1583,298,{"$nulls":7},"*AceView",5738,1122,408,857,18095,700,{"$nulls":7},"*AceView",3338,202,2594,1991,505,86,{"$nulls":7},"AceView",3643,553,1796,1686,3099,463,{"$nulls":7},"AceView",3686,266,2071,1655,842,299,{"$nulls":7},"*KnownGene",2441,31,1125,332,148,69,{"$nulls":7},"*AceView",2491,279,2899,2456,586,68,{"$nulls":7},"*ECgene",2476,289,13835,7933,622,163,{"$nulls":7},"AceView",1966,352,3070,2290,549,548,{"$nulls":7},"*AceView",1469,209,2895,3552,385,55,{"$nulls":7},"Ensembl",1507,0,495,1258,1,0,{"$nulls":7},"Gencode",1681,152,2501,834,195,292]
["*AceView",4138,299,2026,1662,918,112,{"$nulls":7},"Gencode",4138,390,491,149,2399,1588,{"$nulls":7},"Gencode",4139,367,506,156,2031,1508,{"$nulls":7},"*ExonWalk",5392,932,127,754,13729,5412,{"$nulls":7},"AceView",3326,226,2312,1814,489,114,{"$nulls":7},"*AceView",3525,580,2035,1985,3511,169,{"$nulls":7},"*AceView",3572,280,2294,1979,1090,165,{"$nulls":7},"*AceView",2419,62,3329,2315,198,41,{"$nulls":7},"AceView",2452,325,2547,2354,568,125,{"$nulls":7},"Gencode",2447,371,1758,592,363,451,{"$nulls":7},"*AceView",1954,329,3373,2469,641,468,{"$nulls":7},"AceView",1454,168,2731,3325,366,89,{"$nulls":7},"*RefSeq",1481,5,366,806,4,23,{"$nulls":7},"*AceView",1642,140,4094,2249,401,125]
["Exogean",3463,438,420,506,1132,573,{"$nulls":7},"Exogean",3572,689,242,324,2585,1968,{"$nulls":7},"Exogean",3686,586,250,305,2347,1645,{"$nulls":7},"Gencode",4288,540,137,203,14025,6220,{"$nulls":7},"Gencode",3187,299,1169,513,545,197,{"$nulls":7},"Gencode",3005,501,962,700,2791,1409,{"$nulls":7},"Gencode",3463,306,824,575,887,477,{"$nulls":7},"AceView",2407,108,2994,2169,218,33,{"$nulls":7},"Gencode",2402,327,1572,867,563,180,{"$nulls":7},"AceView",2428,272,2858,2120,485,348,{"$nulls":7},"Gencode",1946,415,1898,909,454,663,{"$nulls":7},"*KnownGene",1435,49,1396,1049,411,63,{"$nulls":7},"*KnownGene",1473,16,1028,1412,17,18,{"$nulls":7},"AceView",1629,178,3779,2092,350,189]
["*KnownGene",3187,190,355,197,1470,511,{"$nulls":7},"*ExonWalk",3525,993,2158,529,2619,1981,{"$nulls":7},"*ExonWalk",3643,863,2146,553,2353,1682,{"$nulls":7},"Exogean",3779,730,111,207,15696,5058,{"$nulls":7},"Exogean",2908,401,787,731,650,371,{"$nulls":7},"Exogean",2762,699,657,709,3388,1055,{"$nulls":7},"*KnownGene",2908,206,444,371,1295,624,{"$nulls":7},"Gencode",2403,199,1869,697,195,60,{"$nulls":7},"*KnownGene",2332,175,899,523,577,236,{"$nulls":7},"*AceView",2398,237,3268,2222,640,223,{"$nulls":7},"*RefSeq",1920,269,222,247,283,860,{"$nulls":7},"Gencode",1396,194,1719,1859,367,146,{"$nulls":7},"Gencode",1438,43,1474,2213,19,51,{"$nulls":7},"Exogean",1595,228,2214,790,220,353]
["*ExonWalk",3005,437,2354,1409,1465,698,{"$nulls":7},"*KnownGene",3338,315,140,136,2847,1940,{"$nulls":7},"*KnownGene",3326,317,167,119,2546,1806,{"$nulls":7},"*KnownGene",3408,334,67,120,13786,7339,{"$nulls":7},"*ExonWalk",2490,318,2760,1637,1001,438,{"$nulls":7},"*KnownGene",2490,371,630,438,3078,1637,{"$nulls":7},"*ExonWalk",2762,432,2931,1080,1356,709,{"$nulls":7},"Pairagon",2234,45,559,307,281,143,{"$nulls":7},"*RefSeq",2234,103,176,145,612,299,{"$nulls":7},"*KnownGene",2342,240,1017,330,472,447,{"$nulls":7},"*KnownGene",1911,245,1179,594,353,799,{"$nulls":7},"Pairagon",1355,180,732,878,311,243,{"$nulls":7},"*AceView",1414,27,2558,4126,70,24,{"$nulls":7},"*KnownGene",1588,141,1749,451,282,298]
["*Ensembl",2447,280,70,464,2131,590,{"$nulls":7},"Pairagon",2491,409,112,133,3184,2450,{"$nulls":7},"Pairagon",2452,434,119,140,2878,2348,{"$nulls":7},"Pairagon",2684,267,48,146,13906,7943,{"$nulls":7},"*RefSeq",2441,50,98,69,1156,332,{"$nulls":7},"*Ensembl",1968,362,223,708,3579,1658,{"$nulls":7},"*Ensembl",2253,282,78,648,1717,857,{"$nulls":7},"Exogean",2225,196,1390,1016,224,209,{"$nulls":7},"Exogean",2181,360,1257,1029,582,382,{"$nulls":7},"Exogean",2253,407,1281,886,360,648,{"$nulls":7},"Exogean",1798,436,1585,1008,459,806,{"$nulls":7},"*ExonWalk",1341,179,2949,2736,413,155,{"$nulls":7},"AceView",1410,21,2388,3859,51,47,{"$nulls":7},"*RefSeq",1526,123,733,276,167,475]
["Ensembl",2446,280,70,464,2132,590,{"$nulls":7},"*RefSeq",2419,123,74,42,3394,2312,{"$nulls":7},"*Ensembl",2428,416,65,352,3136,2114,{"$nulls":7},"Ensembl",2478,379,19,384,14144,7911,{"$nulls":7},"*Ensembl",2342,267,162,490,1259,328,{"$nulls":7},"Ensembl",1967,362,223,708,3580,1658,{"$nulls":7},"Ensembl",2253,281,78,648,1717,857,{"$nulls":7},"*Ensembl",2044,186,376,655,412,202,{"$nulls":7},"*Ensembl",1979,288,324,670,923,243,{"$nulls":7},"*RefSeq",2044,211,201,202,568,649,{"$nulls":7},"Pairagon",1773,313,734,325,562,728,{"$nulls":7},"Exogean",1251,287,1358,1931,443,215,{"$nulls":7},"*ECgene",1399,43,10405,12686,94,15,{"$nulls":7},"Pairagon",1519,190,1077,359,323,326]
["*RefSeq",2403,113,82,60,2070,695,{"$nulls":7},"*Ensembl",2398,415,81,367,3512,2215,{"$nulls":7},"Ensembl",2428,415,65,352,3136,2114,{"$nulls":7},"*Ensembl",2476,382,19,384,14148,7909,{"$nulls":7},"Ensembl",2341,267,162,490,1260,328,{"$nulls":7},"Pairagon",1950,397,377,421,3294,1961,{"$nulls":7},"*RefSeq",2225,139,85,209,1615,987,{"$nulls":7},"Ensembl",2043,186,376,655,413,202,{"$nulls":7},"Ensembl",1979,287,324,670,923,243,{"$nulls":7},"Pairagon",1979,284,631,251,625,657,{"$nulls":7},"*Ensembl",1717,356,542,646,634,712,{"$nulls":7},"Ensembl",1220,224,644,1172,504,185,{"$nulls":7},"Pairagon",1385,33,746,981,95,28,{"$nulls":7},"*Ensembl",1516,199,937,609,347,305]
["Pairagon",2402,254,300,189,1903,863,{"$nulls":7},"Ensembl",2398,414,81,367,3512,2215,{"$nulls":7},"*RefSeq",2407,183,35,33,3105,2166,{"$nulls":7},"*RefSeq",2443,151,16,48,14504,7586,{"$nulls":7},"Pairagon",2332,157,412,244,1075,522,{"$nulls":7},"*RefSeq",1923,311,119,305,3546,1736,{"$nulls":7},"Pairagon",2181,208,374,382,1647,999,{"$nulls":7},"*ExonWalk",1923,187,3359,1736,430,305,{"$nulls":7},"*ExonWalk",1950,265,3029,1961,774,421,{"$nulls":7},"*ExonWalk",1968,265,3314,1658,585,708,{"$nulls":7},"Ensembl",1717,355,542,646,634,712,{"$nulls":7},"*Ensembl",1220,224,644,1173,504,185,{"$nulls":7},"Exogean",1285,68,1183,2291,58,165,{"$nulls":7},"Ensembl",1516,198,937,609,347,305]
["Fgenesh",1946,377,75,665,2315,907,{"$nulls":7},"Fgenesh",1954,438,58,613,3718,2453,{"$nulls":7},"Fgenesh",1966,448,35,614,3434,2278,{"$nulls":7},"Fgenesh",2024,396,3,640,14731,7778,{"$nulls":7},"Fgenesh",1911,247,89,816,1425,593,{"$nulls":7},"Fgenesh",1633,441,99,890,3662,1910,{"$nulls":7},"Fgenesh",1798,371,88,806,2050,979,{"$nulls":7},"Fgenesh",1920,264,16,863,491,247,{"$nulls":7},"Fgenesh",1773,359,191,740,1058,314,{"$nulls":7},"Fgenesh",1717,451,179,716,904,640,{"$nulls":7},"*ExonWalk",1633,310,3351,1911,540,890,{"$nulls":7},"*RefSeq",1213,194,462,789,540,156,{"$nulls":7},"Fgenesh",1255,110,309,1389,155,98,{"$nulls":7},"*ExonWalk",1464,73,3890,1778,230,474]
["UP Jigsaw",1681,190,3,294,2655,832,{"$nulls":7},"UP Jigsaw",1642,280,0,246,4247,2236,{"$nulls":7},"UP Jigsaw",1629,300,0,239,3960,2089,{"$nulls":7},"P Twinscan",1815,1801,341,986,13839,8879,{"$nulls":7},"UP Jigsaw",1588,239,0,341,1890,451,{"$nulls":7},"UP Jigsaw",1464,228,0,476,4023,1718,{"$nulls":7},"UP Jigsaw",1595,194,26,353,2477,755,{"$nulls":7},"UP Jigsaw",1526,163,2,477,856,276,{"$nulls":7},"UP Jigsaw",1519,270,49,330,1276,350,{"$nulls":7},"UP Jigsaw",1516,345,0,307,1152,593,{"$nulls":7},"UP Jigsaw",1434,346,24,364,863,766,{"$nulls":7},"UP Jigsaw",1022,344,2,800,683,204,{"$nulls":7},"*ExonWalk",1223,72,3102,2808,114,171,{"$nulls":7},"Fgenesh",1434,310,544,775,398,336]
["P Twinscan",1502,1541,780,1120,2828,838,{"$nulls":7},"P Twinscan",1624,1887,464,968,3981,2520,{"$nulls":7},"P Twinscan",1573,1826,529,1015,3743,2362,{"$nulls":7},"UP Jigsaw",1703,229,0,236,15004,7826,{"$nulls":7},"*P CCDS",1473,13,4,18,1044,1412,{"$nulls":7},"*MGC",1341,152,261,155,3128,2736,{"$nulls":7},"P Twinscan",1569,1269,810,1295,2284,974,{"$nulls":7},"*P CCDS",1481,4,0,23,371,806,{"$nulls":7},"*P CCDS",1385,92,3,28,780,980,{"$nulls":7},"*P CCDS",1508,0,0,0,495,1258,{"$nulls":7},"*P CCDS",1255,106,49,98,419,1389,{"$nulls":7},"Fgenesh",1014,250,373,1426,657,238,{"$nulls":7},"UP Jigsaw",1111,63,0,994,242,155,{"$nulls":7},"*U NscanEst",1225,405,13,422,537,406]
["*P CCDS",1438,13,6,51,1517,2213,{"$nulls":7},"*MGC",1469,234,125,81,3107,3549,{"$nulls":7},"*MGC",1454,210,141,104,2902,3322,{"$nulls":7},"*MGC",1627,145,80,57,11655,11251,{"$nulls":7},"*MGC",1435,48,363,63,1445,1049,{"$nulls":7},"P Twinscan",1338,1254,930,1421,3818,2049,{"$nulls":7},"*P CCDS",1285,48,10,165,1251,2291,{"$nulls":7},"*MGC",1213,88,452,156,656,789,{"$nulls":7},"*MGC",1355,90,221,243,913,877,{"$nulls":7},"*MGC",1220,114,389,186,869,1172,{"$nulls":7},"P Twinscan",1180,789,1416,1558,1012,871,{"$nulls":7},"*P CCDS",883,144,99,382,485,541,{"$nulls":7},"*MGC",883,56,429,541,243,382,{"$nulls":7},"UP Augustus",1116,562,91,522,748,304]
["*MGC",1396,110,257,146,1915,1857,{"$nulls":7},"*P CCDS",1414,48,0,46,2586,4125,{"$nulls":7},"*P CCDS",1410,44,7,47,2410,3858,{"$nulls":7},"*P CCDS",1399,53,3,53,10460,12674,{"$nulls":7},"P Twinscan",1278,1346,1058,1261,2052,599,{"$nulls":7},"*P CCDS",1223,95,19,171,3174,2808,{"$nulls":7},"*MGC",1251,133,310,215,1650,1926,{"$nulls":7},"*U NscanEst",1158,429,9,469,1166,334,{"$nulls":7},"*U NscanEst",1340,406,37,282,1425,380,{"$nulls":7},"P Twinscan",1158,1188,1160,1437,1359,744,{"$nulls":7},"*U NscanEst",1177,418,10,460,1016,870,{"$nulls":7},"*U NscanEst",720,481,0,864,825,364,{"$nulls":7},"*U NscanEst",851,267,0,947,455,202,{"$nulls":7},"*P CCDS",1111,51,191,155,63,994]
["*U NscanEst",1307,471,1,286,3021,840,{"$nulls":7},"*U NscanEst",1297,596,0,172,4489,2339,{"$nulls":7},"*U NscanEst",1292,556,0,217,4171,2215,{"$nulls":7},"*U NscanEst",1333,528,0,204,15909,7291,{"$nulls":7},"*U NscanEst",1183,470,42,370,2076,670,{"$nulls":7},"*U NscanEst",1177,452,45,391,4405,1623,{"$nulls":7},"*U NscanEst",1239,449,12,365,2613,975,{"$nulls":7},"P Twinscan",1068,854,1338,1683,1199,391,{"$nulls":7},"P Twinscan",1213,987,1465,1278,1425,507,{"$nulls":7},"*U NscanEst",1153,534,3,375,1377,731,{"$nulls":7},"UP Augustus",1077,651,76,487,1221,765,{"$nulls":7},"P Twinscan",711,748,923,2561,802,396,{"$nulls":7},"UP Augustus",736,324,17,1214,568,204,{"$nulls":7},"P Twinscan",1042,661,1875,1365,677,449]
["UP Augustus",1244,569,9,469,2965,959,{"$nulls":7},"UP Augustus",1176,648,5,462,4590,2359,{"$nulls":7},"UP Augustus",1166,645,15,465,4234,2278,{"$nulls":7},"UP Augustus",1228,617,2,444,14686,8619,{"$nulls":7},"UP Augustus",1064,572,20,635,2206,659,{"$nulls":7},"UP Augustus",1039,599,35,618,4175,1991,{"$nulls":7},"UP Augustus",1113,613,30,535,2745,969,{"$nulls":7},"UP Augustus",1037,547,29,678,1251,370,{"$nulls":7},"UP Augustus",1069,545,99,578,1639,437,{"$nulls":7},"UP Augustus",1111,597,15,568,1513,637,{"$nulls":7},"*MGC",1014,146,510,239,623,1426,{"$nulls":7},"UP Augustus",709,439,6,1137,922,278,{"$nulls":7},"P Twinscan",728,423,890,2902,506,274,{"$nulls":7},"*MGC",1022,103,580,204,346,800]
["UP ExonHunter",1018,819,12,1388,2838,1312,{"$nulls":7},"UP ExonHunter",995,885,5,1352,4398,2732,{"$nulls":7},"UP ExonHunter",992,875,3,1367,4084,2602,{"$nulls":7},"UP ExonHunter",976,850,0,1411,14705,8852,{"$nulls":7},"UP ExonHunter",909,751,5,1572,2013,1007,{"$nulls":7},"UP ExonHunter",928,708,9,1592,4082,2195,{"$nulls":7},"UP ExonHunter",1004,767,16,1450,2613,1210,{"$nulls":7},"UP ExonHunter",849,733,17,1638,1212,597,{"$nulls":7},"UP ExonHunter",961,789,52,1435,1514,670,{"$nulls":7},"UP ExonHunter",866,863,18,1490,1393,1002,{"$nulls":7},"UP ExonHunter",955,870,23,1389,1221,887,{"$nulls":7},"UP ExonHunter",585,638,14,2000,870,454,{"$nulls":7},"UP ExonHunter",616,552,13,2056,563,329,{"$nulls":7},"UP ExonHunter",987,847,34,1369,760,421]
["UP SGP2",855,848,28,914,3256,1057,{"$nulls":7},"UP SGP2",845,938,0,862,4627,2653,{"$nulls":7},"UP SGP2",846,944,11,844,4303,2529,{"$nulls":7},"UP SGP2",851,909,3,882,15138,8544,{"$nulls":7},"UP SGP2",745,867,7,1026,2322,862,{"$nulls":7},"UP SGP2",770,832,8,1035,4307,2128,{"$nulls":7},"UP SGP2",842,753,19,1031,2842,1143,{"$nulls":7},"UP SGP2",722,756,45,1122,1459,477,{"$nulls":7},"UP SGP2",830,763,48,1004,1760,555,{"$nulls":7},"UP SGP2",767,796,36,1046,1666,828,{"$nulls":7},"UP SGP2",808,841,34,962,1341,914,{"$nulls":7},"UP SGP2",491,607,17,1530,977,441,{"$nulls":7},"UP GeneZilla",529,510,18,1701,675,304,{"$nulls":7},"UP SGP2",815,655,80,1095,838,515]
["UP GeneZilla",813,959,12,974,3265,1090,{"$nulls":7},"UP GeneZilla",821,1037,7,893,4717,2587,{"$nulls":7},"UP GeneZilla",824,1064,13,857,4452,2402,{"$nulls":7},"UP GeneZilla",846,979,5,928,14346,9341,{"$nulls":7},"UP GeneZilla",723,940,16,1079,2434,772,{"$nulls":7},"UP GeneZilla",756,856,14,1132,4548,1901,{"$nulls":7},"UP GeneZilla",805,897,5,1051,3008,1014,{"$nulls":7},"UP GeneZilla",708,814,29,1207,1462,488,{"$nulls":7},"UP GeneZilla",801,868,23,1066,1742,602,{"$nulls":7},"UP GeneZilla",734,913,34,1077,1725,802,{"$nulls":7},"UP GeneZilla",745,944,40,1029,1431,887,{"$nulls":7},"UP GeneZilla",486,675,14,1583,964,459,{"$nulls":7},"UP SGP2",516,468,46,1615,620,372,{"$nulls":7},"UP GeneZilla",814,947,66,931,1036,318]
["UP Dogfish",714,544,6,415,2483,1971,{"$nulls":7},"UP Dogfish",710,553,2,414,3798,3617,{"$nulls":7},"UP Dogfish",708,554,2,415,3506,3464,{"$nulls":7},"*UP GenScan",732,1207,3,1100,13792,10009,{"$nulls":7},"UP Dogfish",650,531,1,497,1921,1358,{"$nulls":7},"UP Dogfish",659,525,5,490,3765,2781,{"$nulls":7},"UP Dogfish",707,497,9,466,2306,1814,{"$nulls":7},"UP Dogfish",616,510,4,549,1058,984,{"$nulls":7},"*UP GenScan",691,1001,6,1344,1556,898,{"$nulls":7},"*UP GenScan",636,1036,7,1363,1491,1134,{"$nulls":7},"*UP GenScan",712,1105,27,1198,1203,1148,{"$nulls":7},"*UP GenScan",425,885,11,1721,939,545,{"$nulls":7},"*UP GenScan",438,657,7,1940,533,537,{"$nulls":7},"*UP GenScan",708,1062,20,1252,894,566]
["*UP GenScan",704,1094,6,1238,2967,1497,{"$nulls":7},"*UP GenScan",705,1258,3,1076,4507,2913,{"$nulls":7},"*UP GenScan",707,1258,3,1074,4055,2916,{"$nulls":7},"UP Dogfish",710,558,2,409,10792,13031,{"$nulls":7},"*UP GenScan",624,1060,7,1351,2194,1111,{"$nulls":7},"*UP GenScan",652,1027,7,1356,4132,2421,{"$nulls":7},"*UP GenScan",695,989,1,1357,2654,1478,{"$nulls":7},"*UP GenScan",614,956,7,1465,1219,825,{"$nulls":7},"UP Dogfish",637,512,29,501,1293,1215,{"$nulls":7},"UP Dogfish",636,545,5,493,1276,1349,{"$nulls":7},"UP Dogfish",616,490,7,566,907,1540,{"$nulls":7},"UP Dogfish",388,462,0,829,718,803,{"$nulls":7},"UP Dogfish",427,371,4,877,529,552,{"$nulls":7},"UP Dogfish",688,454,16,521,609,871]
["UP GeneID",660,795,0,450,3331,1177,{"$nulls":7},"UP GeneID",670,899,0,336,4825,2630,{"$nulls":7},"UP GeneID",663,919,0,323,4436,2579,{"$nulls":7},"UP GeneID",665,862,0,378,14840,9028,{"$nulls":7},"UP GeneID",579,769,0,557,2475,875,{"$nulls":7},"UP GeneID",597,766,0,542,4538,2070,{"$nulls":7},"UP GeneID",620,751,4,530,3038,1169,{"$nulls":7},"UP GeneID",571,711,0,623,1525,562,{"$nulls":7},"UP GeneID",633,764,0,508,1868,644,{"$nulls":7},"UP GeneID",584,764,0,557,1720,957,{"$nulls":7},"UP GeneID",601,724,2,578,1398,1064,{"$nulls":7},"UP GeneID",346,612,0,947,1041,522,{"$nulls":7},"UP GeneID",403,464,0,1038,697,408,{"$nulls":7},"UP GeneID",607,745,12,541,1071,490]
["UP GeneMark",593,710,18,864,3075,1500,{"$nulls":7},"UP GeneMark",618,721,4,842,4405,3102,{"$nulls":7},"UP GeneMark",601,743,0,841,4232,2845,{"$nulls":7},"UP GeneMark",595,739,16,835,13650,10288,{"$nulls":7},"UP GeneMark",536,638,23,988,2250,1143,{"$nulls":7},"UP GeneMark",550,624,19,992,4084,2571,{"$nulls":7},"UP GeneMark",559,660,34,932,2944,1324,{"$nulls":7},"UP GeneMark",515,604,29,1037,1522,621,{"$nulls":7},"UP GeneMark",567,662,80,876,1822,756,{"$nulls":7},"UP GeneMark",537,612,50,986,1570,1154,{"$nulls":7},"UP GeneMark",575,663,77,870,1599,889,{"$nulls":7},"UP GeneMark",330,410,17,1428,978,601,{"$nulls":7},"UP GeneMark",389,408,18,1370,763,356,{"$nulls":7},"UP GeneMark",567,562,78,978,976,625]
["UP Saga",512,627,13,585,2845,1811,{"$nulls":7},"UP Saga",500,749,2,486,3772,3853,{"$nulls":7},"UP Saga",504,691,5,537,3615,3559,{"$nulls":7},"UP Saga",515,644,0,578,13102,10916,{"$nulls":7},"UP Saga",455,584,21,677,1917,1557,{"$nulls":7},"UP Saga",474,584,9,670,3914,2817,{"$nulls":7},"UP Saga",505,588,12,632,2538,1784,{"$nulls":7},"UP Saga",427,580,28,702,1206,1025,{"$nulls":7},"UP Saga",452,591,42,652,1429,1264,{"$nulls":7},"UP Saga",476,646,10,605,1422,1363,{"$nulls":7},"UP Saga",477,549,54,657,1084,1502,{"$nulls":7},"UP Saga",301,424,32,980,767,841,{"$nulls":7},"UP Saga",294,419,15,1009,529,685,{"$nulls":7},"UP Saga",488,510,68,671,739,941]
["// done: 2006-03-03_21:46:58",{"$nulls":13},"// done: 2006-03-03_21:56:37",{"$nulls":13},"// done: 2006-03-03_21:56:55",{"$nulls":13},"// done: 2006-03-03_17:30:01",{"$nulls":13},"// done: 2006-03-03_21:57:38",{"$nulls":13},"// done: 2006-03-03_21:57:57",{"$nulls":13},"// done: 2006-03-03_21:58:16",{"$nulls":13},"// done: 2006-03-03_21:58:35",{"$nulls":13},"// done: 2006-03-03_21:58:54",{"$nulls":13},"// done: 2006-03-03_21:59:12",{"$nulls":13},"// done: 2006-03-03_21:59:30",{"$nulls":13},"// done: 2006-03-03_21:59:50",{"$nulls":13},"// done: 2006-03-03_22:03:13",{"$nulls":13},"// done: 2006-03-03_22:00:08"]
["######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################",{"$nulls":13},"######################################################"]

{"sheet":"Consensus analysis","index":6,"n_rows":61,"n_cols":45,"rows_kept":61,"flags":["formulas_cached_only"]}
["SUMMARY OF THE CONSENSUS ANALYSIS: closest neighbor (or rotating the reference)"]
["The value for the self has been replaced by the maximal value of the line. "]
["CONSENSUS ON TRANSCRIPTS",{"$nulls":29},"CONSENSUS RELATIVE TO POOLS"]
["Track","Number of models with introns","*AceView","Gencode","*ECgene","*KnownGene","*ExonWalk","Exogean","Pairagon","*RefSeq","*Ensembl","Fgenesh","*MGC","*P CCDS","UP Jigsaw","UP Augustus","P Twinscan","UP GeneMark","UP SGP2","UP ExonHunter","UP GeneZilla","*UP GenScan","UP GeneID","UP Dogfish","UP Saga","Sum of models validated by the 23 references","Overall sensitivity: models validated by an independent method","Overall specificity","Sensitivity relative to the best",null,"7:Gc,Av,EC,KG,RS,Ens,EW","Sensitivity wrt 7","Specificity wrt7","4:GC,RS,KG,Ens","Sensitivity wrt 4","Specificity wrt4","mini2AVRS,Ens, KG","23: all but aceview egasp and NscanEST","sensitivity23","Specificity23","AbInitioset:dogfish, ExonHunter, GeneID, GeneMark, Jigsaw, SGP2, Twinscan, Augustus, GenZilla, Saga, NscanEST, Genscan",null,"non-7evidencebased","sensitivityNON7","SpecificityNON7"]
["*AceView",1792," ",1191,1068,385,396,383,296,304,270,209,209,143,135,94,74,50,40,39,37,35,34,29,17,6629,1191,{"v":66.46,"d":"66.5"},{"v":1,"d":"100.0%"},null,1302,0.8367609254498715,0.7265625,420,0.8786610878661087,0.234375,426,1327,0.6780786918753193,0.7405133928571429,121,null,25,0.06234413965087282,0.013950892857142858]
["Gencode",1691,1191," ",1017,385,391,377,286,284,269,205,216,149,147,99,76,50,51,45,41,34,39,30,18,6591,1191,{"v":70.43,"d":"70.4"},{"v":1,"d":"100.0%"},null,1255,0.8065552699228792,0.7421643997634536,437,0.9142259414225942,0.25842696629213485,418,1285,0.656617271333674,0.7599053814311059,125,null,30,0.07481296758104738,0.017740981667652277]
["AceView",1630,1139,1139,999,378,389,390,273,279,259,193,208,140,133,95,74,45,40,38,39,33,34,28,17,6362,1139,{"v":69.88,"d":"69.9"},{"v":0.9563392107472712,"d":"95.6%"},"replaced the value in AceView x *AceView by Aceview x Gencode, not to advantage aceview; fixed the sums also ",1165,0.7487146529562982,0.7147239263803681,413,0.8640167364016736,0.25337423312883434,425,1198,0.6121614716402657,0.7349693251533742,118,null,33,0.08229426433915212,0.020245398773006136]
["*ECgene",3851,1068,1017," ",356,492,325,315,285,256,210,223,143,144,96,73,50,45,46,42,39,38,34,16,6381,1068,{"v":27.73,"d":"27.7"},{"v":0.8967254408060453,"d":"89.7%"},null,1198,0.7699228791773779,0.311088029083355,382,0.799163179916318,0.09919501428200467,377,1237,0.6320899335717935,0.3212152687613607,125,null,39,0.09725685785536159,0.010127239678005712]
["*KnownGene",501,385,385,356," ",249,266,267,287,231,191,204,142,136,91,67,40,41,39,34,31,30,32,15,3904,385,{"v":76.85,"d":"76.9"},{"v":0.3232577665827036,"d":"32.3%"},null,432,0.2776349614395887,0.8622754491017964,411,0.8598326359832636,0.8203592814371258,413,444,0.22687787429739398,0.8862275449101796,115,null,12,0.029925187032418952,0.023952095808383235]
["*ExonWalk",892,396,391,492,249," ",232,220,222,201,164,163,123,129,83,68,41,34,39,37,28,31,30,14,3879,492,{"v":55.16,"d":"55.2"},{"v":0.41309823677581864,"d":"41.3%"},"ExonWalk is very strongly reinforced by Ecgene",511,0.32840616966580977,0.5728699551569507,262,0.5481171548117155,0.2937219730941704,262,524,0.2677567705671947,0.5874439461883408,112,null,13,0.032418952618453865,0.014573991031390135]
["Exogean",554,383,377,325,266,232," ",209,220,206,147,152,113,112,67,52,32,27,33,30,23,23,26,12,3450,383,{"v":69.13,"d":"69.1"},{"v":0.32157850545759864,"d":"32.2%"},null,404,0.2596401028277635,0.7292418772563177,292,0.6108786610878661,0.5270758122743683,297,425,0.2171691364333163,0.7671480144404332,89,null,21,0.05236907730673317,0.03790613718411552]
["Pairagon",471,296,286,315,267,220,209," ",274,212,197,200,140,128,86,69,46,41,40,34,34,33,30,14,3486,315,{"v":66.88,"d":"66.9"},{"v":0.26448362720403024,"d":"26.4%"},"NscanEST was removed from the columns, because it is too similar to its new version Pairagon",310,0.19922879177377892,0.6581740976645435,287,0.600418410041841,0.6093418259023354,285,330,0.16862544711292796,0.7006369426751592,121,null,20,0.04987531172069826,0.04246284501061571]
["*RefSeq",342,304,284,285,287,222,220,274," ",224,203,158,144,123,77,61,39,37,34,32,29,29,27,12,3409,304,{"v":88.89,"d":"88.9"},{"v":0.25524769101595296,"d":"25.5%"},null,332,0.2133676092544987,0.9707602339181286,323,0.6757322175732218,0.9444444444444444,320,334,0.17066939192641797,0.9766081871345029,105,null,2,0.004987531172069825,0.005847953216374269]
["*Ensembl",427,270,269,256,231,201,206,212,224," ",167,143,146,120,81,63,39,36,31,33,26,29,28,14,3095,270,{"v":63.23,"d":"63.2"},{"v":0.22670025188916876,"d":"22.7%"},null,295,0.18958868894601544,0.6908665105386417,280,0.5857740585774058,0.6557377049180327,277,424,0.21665815022994378,0.9929742388758782,108,null,129,0.32169576059850374,0.30210772833723654]
["Fgenesh",462,209,205,210,191,164,147,197,203,167," ",117,141,135,95,79,46,42,45,37,37,33,30,18,2758,210,{"v":45.45,"d":"45.5"},{"v":0.17632241813602015,"d":"17.6%"},null,217,0.13946015424164523,0.4696969696969697,208,0.4351464435146444,0.45021645021645024,204,273,0.13949923352069493,0.5909090909090909,126,null,56,0.1396508728179551,0.12121212121212122]
["*MGC",323,209,216,223,204,163,152,200,158,143,117," ",96,103,70,50,30,34,30,27,26,24,27,12,2537,223,{"v":69.04,"d":"69.0"},{"v":0.18723761544920234,"d":"18.7%"},null,217,0.13946015424164523,0.6718266253869969,196,0.4100418410041841,0.6068111455108359,196,237,0.12110373019928462,0.7337461300309598,89,null,20,0.04987531172069826,0.06191950464396285]
["*P CCDS",201,143,149,143,142,123,113,140,144,146,141,96," ",138,88,73,42,38,41,39,27,27,32,17,2191,149,{"v":74.13,"d":"74.1"},{"v":0.12510495382031905,"d":"12.5%"},null,152,0.09768637532133675,0.7562189054726368,148,0.30962343096234307,0.736318407960199,147,190,0.0970873786407767,0.945273631840796,121,null,38,0.09476309226932668,0.1890547263681592]
["UP Jigsaw",259,135,147,144,136,129,112,128,123,120,135,103,138," ",99,78,43,46,45,42,36,33,37,16,2172,147,{"v":56.76,"d":"56.8"},{"v":0.12342569269521411,"d":"12.3%"},null,150,0.09640102827763496,0.5791505791505791,136,0.28451882845188287,0.525096525096525,134,199,0.10168625447112928,0.7683397683397684,144,null,49,0.12219451371571072,0.1891891891891892]
["*U NscanEst",282,97,105,98,88,91,74,146,82,82,81,69,71,81,65,50,35,33,27,25,25,28,24,11,1488,146,{"v":51.77,"d":"51.8"},{"v":0.12258606213266163,"d":"12.3%"},null,104,0.06683804627249357,0.36879432624113473,92,0.19246861924686193,0.3262411347517731,91,114,0.05825242718446602,0.40425531914893614,101,null,10,0.02493765586034913,0.03546099290780142]
["UP Augustus",312,94,99,96,91,83,67,86,77,81,95,70,88,99," ",75,48,46,44,45,39,35,28,15,1600,99,{"v":31.73,"d":"31.7"},{"v":0.08312342569269521,"d":"8.3%"},null,100,0.06426735218508997,0.32051282051282054,90,0.18828451882845187,0.28846153846153844,88,151,0.07715891670924885,0.483974358974359,136,null,51,0.12718204488778054,0.16346153846153846]
["P Twinscan",547,74,76,73,67,68,52,69,61,63,79,50,73,78,75," ",50,49,45,38,46,34,28,9,1336,79,{"v":14.44,"d":"14.4"},{"v":0.06633081444164568,"d":"6.6%"},null,77,0.04948586118251928,0.14076782449725778,67,0.1401673640167364,0.12248628884826325,64,152,0.07766990291262135,0.27787934186471663,139,null,75,0.18703241895261846,0.13711151736745886]
["UP GeneMark",551,50,50,50,40,41,32,46,39,39,46,30,42,43,48,50," ",38,28,44,42,40,8,11,907,50,{"v":9.07,"d":"9.1"},{"v":0.041981528127623846,"d":"4.2%"},null,50,0.032133676092544985,0.09074410163339383,41,0.08577405857740586,0.07441016333938294,31,99,0.05058763413387839,0.17967332123411978,88,null,49,0.12219451371571072,0.08892921960072596]
["UP SGP2",552,40,51,45,41,34,27,41,37,36,42,34,38,46,46,49,38," ",30,28,27,44,16,7,848,51,{"v":9.24,"d":"9.2"},{"v":0.042821158690176324,"d":"4.3%"},null,48,0.030848329048843187,0.08695652173913043,40,0.08368200836820083,0.07246376811594203,38,91,0.04649974450689831,0.16485507246376813,83,null,43,0.10723192019950124,0.07789855072463768]
["UP GeneZilla",477,37,41,42,34,37,30,34,32,33,37,27,39,42,45,38,44,28,28," ",33,30,9,10,775,45,{"v":9.43,"d":"9.4"},{"v":0.037783375314861464,"d":"3.8%"},null,47,0.030205655526992288,0.09853249475890985,39,0.08158995815899582,0.08176100628930817,33,80,0.040878896269800714,0.16771488469601678,76,null,33,0.08229426433915212,0.06918238993710692]
["UP ExonHunter",807,39,45,46,39,39,33,40,34,31,45,30,41,45,44,45,28,30," ",28,23,13,11,6,781,46,5.7,{"v":0.038623005877413935,"d":"3.9%"},null,41,0.02634961439588689,0.05080545229244114,33,0.06903765690376569,0.040892193308550186,38,79,0.0403679100664282,0.09789343246592318,74,null,38,0.09476309226932668,0.04708798017348203]
["UP GeneID",267,34,39,38,30,31,23,33,29,29,33,24,27,33,35,34,40,44,13,30,29," ",12,8,692,44,{"v":16.48,"d":"16.5"},{"v":0.036943744752308987,"d":"3.7%"},null,38,0.02442159383033419,0.14232209737827714,32,0.06694560669456066,0.1198501872659176,31,75,0.03832396525293817,0.2808988764044944,68,null,37,0.09226932668329177,0.13857677902621723]
["UP Dogfish",204,29,30,34,32,30,26,30,27,28,30,27,32,37,28,28,8,16,11,9,10,12," ",2,553,37,{"v":18.14,"d":"18.1"},{"v":0.031066330814441646,"d":"3.1%"},null,33,0.021208226221079693,0.16176470588235295,30,0.06276150627615062,0.14705882352941177,29,47,0.02401635155850792,0.23039215686274508,45,null,14,0.034912718204488775,0.06862745098039216]
["*UP GenScan",395,35,34,39,31,28,23,34,29,26,37,26,27,36,39,46,42,27,23,33," ",29,10,4,704,46,{"v":11.65,"d":"11.7"},{"v":0.038623005877413935,"d":"3.9%"},null,37,0.02377892030848329,0.09367088607594937,32,0.06694560669456066,0.0810126582278481,32,84,0.04292284108329075,0.21265822784810126,78,null,47,0.1172069825436409,0.1189873417721519]
["UP Saga",331,17,18,16,15,14,12,14,12,14,18,12,17,16,15,9,11,7,6,10,4,8,2," ",285,18,{"v":5.44,"d":"5.4"},{"v":0.015113350125944584,"d":"1.5%"},null,18,0.011568123393316195,0.054380664652567974,14,0.029288702928870293,0.04229607250755287,14,24,0.012263668880940215,0.07250755287009064,19,null,6,0.014962593516209476,0.01812688821752266]
["total models validated by others",18121,7865,7835,7478,4370,4359,3914,3905,3770,3436,3032,2814,2402,2386,1760,1460,987,921,846,839,762,754,605,313,66813,8327,{"v":45.95,"d":"46.0"},null,null,1556,null,0.08586722587053694,478,null,null,473,1957,1,0.10799624744771259,285,null,401,null,0.022129021577175653]
["measures global recognition"]
[]
["CONSENSUS ON CDS"]
["Track","Number of CDS with introns","*ECgene","*AceView","Gencode","*ExonWalk","*KnownGene","Pairagon","Exogean","*RefSeq","*Ensembl","Fgenesh","*MGC","*P CCDS","UP Jigsaw","UP Augustus","P Twinscan","UP GeneMark","UP SGP2","UP ExonHunter","UP GeneZilla","*UP GenScan","UP GeneID","UP Dogfish","UP Saga","Sum of models validated by the 23 references","Overall sensitivity: models validated by an independent method","Overall specificity","Sensitivity relative to the best"]
["*ECgene",3551," ",824,476,534,357,327,357,285,277,243,229,188,186,115,103,60,54,61,56,46,43,47,24,5716,824,23.2,{"v":0.9705535924617197,"d":"97.1%"}]
["AceView",1460,849,849,468,403,354,271,373,269,260,219,195,180,169,111,96,53,49,54,54,37,41,41,22,5417,849,58.15,{"v":1,"d":"100.0%"}]
["*AceView",1627,824," ",459,376,359,279,338,270,263,225,198,184,173,114,97,55,51,53,51,39,40,43,21,5336,824,50.65,{"v":0.9705535924617197,"d":"97.1%"}]
["*ExonWalk",873,534,376,323," ",261,231,248,219,207,175,180,153,162,99,90,47,44,52,46,33,37,37,19,4107,534,61.17,{"v":0.6289752650176679,"d":"62.9%"}]
["Gencode",649,476,459," ",323,328,267,308,263,256,214,193,182,178,110,88,50,49,53,45,35,37,39,21,4450,476,73.34,{"v":0.5606595995288575,"d":"56.1%"}]
["*KnownGene",477,357,359,328,261," ",267,280,281,258,216,206,189,177,108,87,47,47,48,41,35,33,38,21,4043,359,75.26,{"v":0.42285041224970554,"d":"42.3%"}]
["Exogean",538,357,338,308,248,280,215," ",218,216,173,150,152,151,88,77,35,40,44,39,28,29,36,16,3595,357,66.36,{"v":0.4204946996466431,"d":"42.0%"}]
["Pairagon",437,327,279,267,231,267," ",215,275,227,215,200,187,162,101,84,49,47,47,43,34,35,36,19,3674,327,74.83,{"v":0.38515901060070673,"d":"38.5%"}]
["*RefSeq",325,285,270,263,219,281,275,218," ",235,232,166,197,165,99,83,47,45,46,40,33,33,37,20,3574,285,87.69,{"v":0.33568904593639576,"d":"33.6%"}]
["*Ensembl",418,277,263,256,207,258,227,216,235," ",202,154,201,161,104,85,48,45,47,43,32,32,36,20,3426,277,66.27,{"v":0.32626619552414604,"d":"32.6%"}]
["Fgenesh",458,243,225,214,175,216,215,173,232,202," ",136,164,147,104,88,51,50,49,40,39,35,33,19,3093,243,53.06,{"v":0.2862190812720848,"d":"28.6%"}]
["*MGC",310,229,198,193,180,206,200,150,166,154,136," ",128,135,84,68,35,45,41,35,30,28,32,16,2718,229,73.87,{"v":0.2697290930506478,"d":"27.0%"}]
["*P CCDS",201,188,184,182,153,189,187,152,197,201,164,128," ",138,88,73,42,38,41,39,27,27,32,17,2688,201,100,{"v":0.23674911660777384,"d":"23.7%"}]
["UP Jigsaw",259,186,173,178,162,177,162,151,165,161,147,135,138," ",99,78,43,46,45,42,36,33,37,16,2596,186,71.81,{"v":0.21908127208480566,"d":"21.9%"}]
["*U NscanEst",252,120,116,116,114,114,155,95,111,111,102,88,98,103,82,72,44,43,35,38,28,35,33,14,1867,155,61.51,{"v":0.18256772673733804,"d":"18.3%"}]
["UP Augustus",312,115,114,110,99,108,101,88,99,104,104,84,88,99," ",75,48,46,44,45,39,35,28,15,1803,115,36.86,{"v":0.1354534746760895,"d":"13.5%"}]
["P Twinscan",547,103,97,88,90,87,84,77,83,85,88,68,73,78,75," ",50,49,45,38,46,34,28,9,1578,103,18.83,{"v":0.12131919905771496,"d":"12.1%"}]
["UP GeneMark",551,60,55,50,47,47,49,35,47,48,51,35,42,43,48,50," ",38,28,44,42,40,8,11,978,60,10.89,{"v":0.0706713780918728,"d":"7.1%"}]
["UP ExonHunter",807,61,53,53,52,48,47,44,46,47,49,41,41,45,44,45,28,30," ",28,23,13,11,6,916,61,7.56,{"v":0.071849234393404,"d":"7.2%"}]
["UP GeneZilla",477,56,51,45,46,41,43,39,40,43,40,35,39,42,45,38,44,28,28," ",33,30,9,10,881,56,11.74,{"v":0.06595995288574794,"d":"6.6%"}]
["UP SGP2",552,54,51,49,44,47,47,40,45,45,50,45,38,46,46,49,38," ",30,28,27,44,16,7,940,54,9.78,{"v":0.0636042402826855,"d":"6.4%"}]
["UP Dogfish",204,47,43,39,37,38,36,36,37,36,33,32,32,37,28,28,8,16,11,9,10,12," ",2,654,47,23.04,{"v":0.05535924617196702,"d":"5.5%"}]
["*UP GenScan",395,46,39,35,33,35,34,28,33,32,39,30,27,36,39,46,42,27,23,33," ",29,10,4,746,46,11.65,{"v":0.05418138987043581,"d":"5.4%"}]
["UP GeneID",267,43,40,37,37,33,35,29,33,32,35,28,27,33,35,34,40,44,13,30,29," ",12,8,731,44,16.48,{"v":0.05182567726737338,"d":"5.2%"}]
["UP Saga",331,24,21,21,19,21,19,16,20,20,19,16,17,16,15,9,11,7,6,10,4,8,2," ",345,24,7.25,{"v":0.028268551236749116,"d":"2.8%"}]
["total models validated by others",16278,6685,6301,5034,4624,4511,4100,4063,3954,3797,3414,3001,2966,2868,1996,1746,1075,1032,1005,973,811,807,728,381,null,6736,41.38,7.9340400471142525]
[" (measures global recognition)"]

{"sheet":"ConsensusFromPool","index":7,"n_rows":46,"n_cols":23,"rows_kept":46,"flags":["formulas_cached_only"]}
["CONSENSUS FROM POOLED METHODS"]
["23 INDEPENDENT METHODS POOLED FOR THE REFERENCE",{"$nulls":5},"(Here called King Kong)",{"$nulls":5},"7 evidence based methods: RefSeq, UCSC Known Genes, Ensembl, Gencode, AceView, Ecgene, ExonWalk"]
["// start: 2006-03-07_15:23:55",{"$nulls":11},"// start: 2006-03-08_04:46:17"]
["// data parsed, start statistics: 2006-03-07_15:24:06",{"$nulls":11},"// data parsed, start statistics: 2006-03-08_04:46:25"]
["######################################################",{"$nulls":11},"######################################################"]
["## Intron chaining (all introns and exons count multiply)multi, 31 regions",{"$nulls":11},"## Intron chaining (all introns and exons count multiply)multi, 31 regions"]
["Found 25564 mrna",{"$nulls":11},"Found 25163 mrna"]
[]
[]
[]
["Analyse the transcript with introns",{"$nulls":11},"Analyse the transcript with introns"]
["Program","Transcript identical to King-Kong-24","Transcript best matching King-Kong-24","New transcript in King-Kong-24 gene","New transcript in new gene","Program","Missed King-Kong-24 transcript in touched gene","Missed King-Kong-24 transcript in missed gene","Sensitivity","Specificity","Verif",null,"Program","Transcript identical to King-Kong-7","Transcript best matching King-Kong-7","New transcript in King-Kong-7 gene","New transcript in new gene","Program","Missed King-Kong-7 transcript in touched gene","Missed King-Kong-7 transcript in missed gene","Sensitivity","Specificity","Verif"]
["King-Kong-24",1957,0,0,0,"King-Kong-24",0,0,100,100,0,null,"King-Kong-7",1556,0,0,0,"King-Kong-7",0,0,100,100,0]
["*AceView",1327,177,159,129,"*AceView",333,120,67.81,74.05,0,null,"*AceView",1302,117,224,149,"*AceView",108,29,83.68,72.66,0]
["Gencode",1285,184,131,91,"Gencode",302,186,65.66,75.99,0,null,"Gencode",1255,120,203,113,"Gencode",126,55,80.66,74.22,0]
["*ECgene",1237,368,1801,445,"*ECgene",259,93,63.21,32.12,0,null,"*ECgene",1198,243,1927,483,"*ECgene",87,28,76.99,31.11,0]
["AceView",1198,179,129,124,"AceView",354,226,61.22,73.5,0,null,"AceView",1165,136,180,149,"AceView",167,88,74.87,71.47,0]
["*ExonWalk",524,202,121,45,"*ExonWalk",556,675,26.78,58.74,0,null,"*ExonWalk",511,173,161,47,"*ExonWalk",397,475,32.84,57.29,0]
["*KnownGene",444,46,8,3,"*KnownGene",819,648,22.69,88.62,0,null,"*KnownGene",432,42,20,7,"*KnownGene",619,463,27.76,86.23,0]
["Exogean",425,113,2,14,"Exogean",802,617,21.72,76.71,0,null,"Exogean",404,118,11,21,"Exogean",597,437,25.96,72.92,0]
["Ensembl",424,3,0,0,"Ensembl",942,588,21.67,99.3,0,null,"*RefSeq",332,10,0,0,"*RefSeq",719,495,21.34,97.08,0]
["*Ensembl",424,3,0,0,"*Ensembl",942,588,21.67,99.3,0,null,"Pairagon",310,88,19,54,"Pairagon",660,498,19.92,65.82,0]
["*RefSeq",334,8,0,0,"*RefSeq",917,698,17.07,97.66,0,null,"Ensembl",295,68,6,58,"Ensembl",730,463,18.96,69.09,0]
["Pairagon",330,84,13,44,"Pairagon",846,697,16.86,70.06,0,null,"*Ensembl",295,68,6,58,"*Ensembl",730,463,18.96,69.09,0]
["Fgenesh",273,74,1,114,"Fgenesh",921,689,13.95,59.09,0,null,"Fgenesh",217,93,1,151,"Fgenesh",698,548,13.95,46.97,0]
["*MGC",237,61,23,2,"*MGC",763,896,12.11,73.37,0,null,"*MGC",217,69,25,12,"*MGC",613,657,13.95,67.18,0]
["UP Jigsaw",199,46,0,14,"UP Jigsaw",977,735,10.17,76.83,0,null,"*P CCDS",152,30,1,18,"*P CCDS",490,884,9.77,75.62,0]
["*P CCDS",190,6,3,2,"*P CCDS",613,1148,9.71,94.53,0,null,"UP Jigsaw",150,74,1,34,"UP Jigsaw",734,598,9.64,57.92,0]
["P Twinscan",152,232,52,111,"P Twinscan",717,856,7.77,27.79,0,null,"*U NscanEst",104,109,0,69,"*U NscanEst",786,557,6.68,36.88,0]
["UP Augustus",151,117,2,42,"UP Augustus",967,722,7.72,48.4,0,null,"UP Augustus",100,133,2,77,"UP Augustus",725,598,6.43,32.05,0]
["*U NscanEst",114,106,0,62,"*U NscanEst",981,756,5.83,40.43,0,null,"P Twinscan",77,238,51,181,"P Twinscan",535,706,4.95,14.08,0]
["UP GeneMark",99,158,1,293,"UP GeneMark",821,879,5.06,17.97,0,null,"UP GeneMark",50,162,2,337,"UP GeneMark",618,726,3.21,9.07,0]
["UP SGP2",91,142,2,317,"UP SGP2",846,878,4.65,16.49,0,null,"UP SGP2",48,148,2,354,"UP SGP2",647,713,3.08,8.7,0]
["*UP GenScan",84,134,0,177,"*UP GenScan",874,865,4.29,21.27,0,null,"UP ExonHunter",47,125,1,634,"UP ExonHunter",730,654,3.02,5.82,0]
["UP GeneZilla",80,168,3,226,"UP GeneZilla",873,836,4.09,16.77,0,null,"UP GeneZilla",41,167,5,264,"UP GeneZilla",652,696,2.63,8.6,0]
["UP ExonHunter",79,132,1,595,"UP ExonHunter",926,820,4.04,9.79,0,null,"UP GeneID",38,125,0,104,"UP GeneID",686,707,2.44,14.23,0]
["UP GeneID",75,118,0,74,"UP GeneID",888,876,3.83,28.09,0,null,"*UP GenScan",37,135,1,222,"*UP GenScan",675,709,2.38,9.37,0]
["UP Dogfish",47,95,0,62,"UP Dogfish",694,1121,2.4,23.04,0,null,"UP Dogfish",33,99,1,71,"UP Dogfish",550,874,2.12,16.18,0]
["UP Saga",24,122,2,183,"UP Saga",641,1170,1.23,7.25,0,null,"UP Saga",18,116,2,195,"UP Saga",503,919,1.16,5.44,0]
[]
[]
["There are 7118 unique introns ammong the 12226 introns in new gene",{"$nulls":11},"There are 8178 unique introns ammong the 16613 introns in new gene"]
[]
[]
["// done: 2006-03-07_15:24:09",{"$nulls":11},"// done: 2006-03-08_04:46:26"]
["######################################################",{"$nulls":11},"######################################################"]