{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["TableS10"],"not_rendered":{"external_links":1},"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"TableS10","index":0,"n_rows":53,"n_cols":11,"rows_kept":53,"flags":["formulas_cached_only"]}
["Table S10. Custom Agilent 244K copy number variable-scaffolds anchoring information."]
["Scaffold","ScaffoldSize","CNVType","CNVStart","CNVEnd","CNVSize","OrphanAnchoredChrom (hg18)","XSpeciesChimpLocation (PanTro2)","XSpeciesHumanLocation (hg18)","XSpeciesSummary","ConfirmedByStudies"]
["GA_x54KRFTF0F9",{"v":103786604,"d":"103,786,604"},"del",{"v":63649112,"d":"63,649,112"},{"v":63649443,"d":"63,649,443"},332,"-","chr6:108817032-108818244","chr6:107428636-107431227","poor localization","-"]
["GA_x54KRFTF0F9",{"v":103786604,"d":"103,786,604"},"dup",{"v":66380686,"d":"66,380,686"},{"v":66381123,"d":"66,381,123"},438,"-","chr6:106003186-106004346","chr6:104821921-104821920","insertionPoint","-"]
["GA_x54KRFTF114",{"v":44859570,"d":"44,859,570"},"del",{"v":536046,"d":"536,046"},{"v":536215,"d":"536,215"},170,"-","chr10:133,135,134-133,163,525","chr10:133527517-133577518","complete gap in human","-"]
["GA_x5YUV32UWVA",{"v":17000,"d":"17,000"},"dup",1,{"v":5031,"d":"5,031"},{"v":5031,"d":"5,031"},"chr5:12736579-12739369","chr5:12903469-12927075","chr5:12738942-12738942","insertionPoint","Kidd et al."]
["GA_x5YUV32UWVA",{"v":17000,"d":"17,000"},"dup",{"v":10446,"d":"10,446"},{"v":14881,"d":"14,881"},{"v":4436,"d":"4,436"},"chr5:12736579-12739369","chr5:12903469-12927075","chr5:12738942-12738942","insertionPoint","Kidd et al."]
["GA_x5YUV32UWVA",{"v":17000,"d":"17,000"},"dup",{"v":15545,"d":"15,545"},{"v":16821,"d":"16,821"},{"v":1277,"d":"1,277"},"chr5:12736579-12739369","chr5:12903469-12927075","chr5:12738942-12738942","insertionPoint","Kidd et al."]
["GA_x5YUV32UYDY",{"v":11343,"d":"11,343"},"dup",348,{"v":1053,"d":"1,053"},706,"-","chr5:12915998-12917054","chr5:12738942-12738943","23kb in chimp, not in human"]
["GA_x5YUV32UYF3",{"v":2362,"d":"2,362"},"dup",497,{"v":1994,"d":"1,994"},{"v":1498,"d":"1,498"},"-","chr9:133012255-133014559","chr9:134815188-134815935","-","Kidd et al."]
["GA_x5YUV32UYWD",{"v":2703,"d":"2,703"},"dup",25,{"v":2558,"d":"2,558"},{"v":2534,"d":"2,534"},"chr12:1045621-1053760","chr12:1,103,363-1,106,071","chr12:1047622-1047623","gaps and repeats in chimp","mate pair, Kidd et al., Levy et al."]
["GA_x5YUV32UYY7",{"v":6018,"d":"6,018"},"dup",794,{"v":1546,"d":"1,546"},753,"chr1 :2572240-2608915","-","-","-","mate pair"]
["GA_x5YUV32UYY7",{"v":6018,"d":"6,018"},"dup",{"v":4240,"d":"4,240"},{"v":5982,"d":"5,982"},{"v":1743,"d":"1,743"},"chr1 :2572240-2608915","-","-","-","mate pair"]
["GA_x5YUV32UYYP",{"v":23319,"d":"23,319"},"dup",{"v":12241,"d":"12,241"},{"v":14254,"d":"14,254"},{"v":2014,"d":"2,014"},"-","-","-","no match to chimp","-"]
["GA_x5YUV32UYYP",{"v":23319,"d":"23,319"},"dup",{"v":21442,"d":"21,442"},{"v":23316,"d":"23,316"},{"v":1875,"d":"1,875"},"-","-","-","no match to chimp","-"]
["GA_x5YUV32V00B",{"v":3591,"d":"3,591"},"dup",{"v":2293,"d":"2,293"},{"v":3591,"d":"3,591"},{"v":1299,"d":"1,299"},"chr10:58001312-downstream","chr10:55,467,474-55,469,323","chr10:58004493-58004624","~LTR sequnce at breakpoint","mate pair"]
["GA_x5YUV32V15N",{"v":3069,"d":"3,069"},"del",381,{"v":2638,"d":"2,638"},2258,null,"chr8:59337735-59340796","chr8:62288433-62288434","insertionPoint","-"]
["GA_x5YUV32V1HL",{"v":2970,"d":"2,970"},"dup",307,{"v":1654,"d":"1,654"},{"v":1348,"d":"1,348"},"chr13:22470718-22487328","chr13:22,570,408-22,573,378","chr13:22478860-22478860","-","mate pair"]
["GA_x5YUV32V28B",{"v":1309,"d":"1,309"},"dup",344,{"v":1240,"d":"1,240"},897,"chr3:upstream-197321644","-","-","-","-"]
["GA_x5YUV32V2AG",{"v":20564,"d":"20,564"},"dup",242,{"v":5648,"d":"5,648"},{"v":5407,"d":"5,407"},"chr7:12160401-downstream","chr7:12,210,106-12,230,563","chr7:12166258-12166438","~200 bp human sequence at insertion site, not found in chimp","mate pair"]
["GA_x5YUV32V2AG",{"v":20564,"d":"20,564"},"dup",{"v":9803,"d":"9,803"},{"v":18539,"d":"18,539"},{"v":8737,"d":"8,737"},"chr7:12160401-downstream","chr7:12,210,106-12,230,563","chr7:12166258-12166438","~200 bp human sequence at insertion site, not found in chimp","mate pair"]
["GA_x5YUV32V9W2",{"v":1100,"d":"1,100"},"dup",206,{"v":1015,"d":"1,015"},810,"-","-","-","no match to chimp","-"]
["GA_x5YUV32VDM4",{"v":1375,"d":"1,375"},"dup",24,{"v":1286,"d":"1,286"},{"v":1263,"d":"1,263"},"-","-","-","no match to chimp","-"]
["GA_x5YUV32VETA",{"v":1751,"d":"1,751"},"del",221,611,391,"-","-","-","no match to chimp","-"]
["GA_x5YUV32VJ08",{"v":1100,"d":"1,100"},"del",436,679,244,"-","-","-","-","-"]
["GA_x5YUV32VP8N",{"v":1100,"d":"1,100"},"dup",665,927,263,"-","-","-","-","-"]
["GA_x5YUV32VQPK",{"v":15087,"d":"15,087"},"dup",{"v":7692,"d":"7,692"},{"v":14813,"d":"14,813"},{"v":7122,"d":"7,122"},"chr12:126203566-downstream","chr12:129,110,790-129,123,712","chr12:126204119-126207499","~2kb LTR in human not in chimp","mate pair, Kidd et al., Tuzun et al."]
["GA_x5YUV32VS0N",{"v":13955,"d":"13,955"},"dup",371,{"v":3047,"d":"3,047"},{"v":2677,"d":"2,677"},"chr3:upstream-129353325","chr3:132,549,236-132,556,632","chr3:129341832-129341833","-","Kidd et al."]
["GA_x5YUV32VS9W",{"v":1996323,"d":"1,996,323"},"dup",{"v":1606158,"d":"1,606,158"},{"v":1606549,"d":"1,606,549"},392,"-","-","-","-","-"]
["GA_x5YUV32VSH4",{"v":31535,"d":"31,535"},"dup",138,{"v":1038,"d":"1,038"},901,"chr1:2577598-downstream","-","-","-","mate pair"]
["GA_x5YUV32VSH4",{"v":31535,"d":"31,535"},"dup",{"v":11687,"d":"11,687"},{"v":14057,"d":"14,057"},{"v":2371,"d":"2,371"},"chr1:2577598-downstream","-","-","-","mate pair"]
["GA_x5YUV32VSH4",{"v":31535,"d":"31,535"},"dup",{"v":19706,"d":"19,706"},{"v":25655,"d":"25,655"},{"v":5950,"d":"5,950"},"chr1:2577598-downstream","-","-","-","mate pair"]
["GA_x5YUV32VSH4",{"v":31535,"d":"31,535"},"dup",{"v":28477,"d":"28,477"},{"v":29167,"d":"29,167"},691,"chr1:2577598-downstream","-","-","-","mate pair"]
["GA_x5YUV32VSH4",{"v":31535,"d":"31,535"},"dup",{"v":30722,"d":"30,722"},{"v":31520,"d":"31,520"},799,"chr1:2577598-downstream","-","-","-","mate pair"]
["GA_x5YUV32VSHA",{"v":11111593,"d":"11,111,593"},"dup",{"v":5728198,"d":"5,728,198"},{"v":5728787,"d":"5,728,787"},590,"-","chr13:58262484-58265181 ","chr13:57813322-57813323","insertionPoint","mate pair, Kidd et al., Levy et al."]
["GA_x5YUV32VTY6",{"v":38596040,"d":"38,596,040"},"dup",{"v":13803851,"d":"13,803,851"},{"v":13808084,"d":"13,808,084"},{"v":4234,"d":"4,234"},"-","chr9:25531967-25536368","chr9:24970779-24970780","insertionPoint","mate pair, Kidd et al., Levy et al."]
["GA_x5YUV32VTY6",{"v":38596040,"d":"38,596,040"},"dup",{"v":30827981,"d":"30,827,981"},{"v":30830927,"d":"30,830,927"},{"v":2947,"d":"2,947"},"-","chr9:8,070,985-8,074,223","chr9:7939552-7939553","insertionPoint","mate pair, Levy et al."]
["GA_x5YUV32VVQK",{"v":33050393,"d":"33,050,393"},"dup",{"v":31500885,"d":"31,500,885"},{"v":31502387,"d":"31,502,387"},{"v":1503,"d":"1,503"},"-","chr14:20,182,399-20,185,465","chr14:20815245-20815269","insertionRegion (25bp window in Hs)"]
["GA_x5YUV32VWPT",{"v":47628048,"d":"47,628,048"},"dup",{"v":47121635,"d":"47,121,635"},{"v":47122564,"d":"47,122,564"},930,"-","chr2:248,008,059-248,009,441","chr2:242184899-242185473","insertionRegion (500bp window in Hs)"]
["GA_x5YUV32VYJC",{"v":23851963,"d":"23,851,963"},"dup",{"v":19915964,"d":"19,915,964"},{"v":19916663,"d":"19,916,663"},700,"-","chr7:80,487,669-80,488,633","chr7:80533322-80533323","insertionRegion (500bp window in Hs)"]
["GA_x5YUV32VYQG",{"v":101945515,"d":"101,945,515"},"dup",{"v":11914187,"d":"11,914,187"},{"v":11915397,"d":"11,915,397"},{"v":1211,"d":"1,211"},"-","chr3:189,193,499-189,194,798","chr3:184885584-184885665","insertionRegion (82bp window in Hs)"]
["GA_x5YUV32VYQG",{"v":101945515,"d":"101,945,515"},"dup",{"v":91892316,"d":"91,892,316"},{"v":91893679,"d":"91,893,679"},{"v":1364,"d":"1,364"},"-","chr3:107,770,253-107,771,516","chr3:104951432-104951433","insertionPoint"]
["GA_x5YUV32W0N4",{"v":611220,"d":"611,220"},"dup",{"v":198774,"d":"198,774"},{"v":199048,"d":"199,048"},275,"chr2:132832444-downstream","-","-","-","Redon et al."]
["GA_x5YUV32W0N4",{"v":611220,"d":"611,220"},"dup",{"v":199495,"d":"199,495"},{"v":202027,"d":"202,027"},{"v":2533,"d":"2,533"},"chr2:132832444-downstream","-","-","-","Redon et al."]
["GA_x5YUV32W0Q9",{"v":22380413,"d":"22,380,413"},"dup",{"v":2310935,"d":"2,310,935"},{"v":2311669,"d":"2,311,669"},735,"-","chr13:66185401-66186203 ","no match","not anchored well to human"]
["GA_x5YUV32W1V9",{"v":25070985,"d":"25,070,985"},"dup",{"v":24624463,"d":"24,624,463"},{"v":24624681,"d":"24,624,681"},219,"-","-","-","-","-"]
["GA_x5YUV32W3JR",{"v":37175744,"d":"37,175,744"},"dup",{"v":1511235,"d":"1,511,235"},{"v":1513331,"d":"1,513,331"},{"v":2097,"d":"2,097"},"-","chr7:8,360,936-8,363,886","chr7:8338831-8338835","insertionRegion (5bp window)","mate pair, Levy et al."]
["GA_x5YUV32W3JR",{"v":37175744,"d":"37,175,744"},"dup",{"v":5347549,"d":"5,347,549"},{"v":5348123,"d":"5,348,123"},575,"-","chr7:12,211,391-12,211,985","chr7:12166258-12166438","insertionRegion (181bp window)","-"]
["GA_x5YUV32W46Y",{"v":79994791,"d":"79,994,791"},"dup",{"v":33940348,"d":"33,940,348"},{"v":33947171,"d":"33,947,171"},{"v":6824,"d":"6,824"},"33940348:33947171-6824","chr12:87,054,419-87,061,854","chr12:85177702-85177704","Gap chimp: chr12:134,300,267-134,345,468  ","-"]
["GA_x5YUV32W706",{"v":70496567,"d":"70,496,567"},"dup",{"v":69716841,"d":"69,716,841"},{"v":69722287,"d":"69,722,287"},{"v":5447,"d":"5,447"},"-","chr4:123,565,837-123,572,454","no match","not mapped well to human","-"]
["GA_x5YUV32W7K2",{"v":66459542,"d":"66,459,542"},"del",{"v":46804628,"d":"46,804,628"},{"v":46805061,"d":"46,805,061"},434,"-","chr4:101,937,351-101,939,989","chr4:99900913-99901981","insertionRegion (1kb window)","-"]
["GA_x5YUV32W7K2",{"v":66459542,"d":"66,459,542"},"del",{"v":49208051,"d":"49,208,051"},{"v":49208351,"d":"49,208,351"},301,"-","chr4:104444951-104445503 ","chr4:102304273-102304274","insertionPoint (2bp)","-"]
["GA_x5YUV32W8NG",{"v":32701733,"d":"32,701,733"},"dup",{"v":25572073,"d":"25,572,073"},{"v":25575185,"d":"25,575,185"},{"v":3113,"d":"3,113"},"-","chr21:21,174,650-21,177,814","chr21:21392146-21392147","insertionPoint","mate pair, Levy et al."]