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["Table S20. A detailed list of genes that are completely encompassed within non redundant gains and losses."]
["RefSeq gene encompassed within gains",null,null,"RefSeq gene encompassed within losses"]
["AMY1A|GeneID=276",null,null,"TARP|GeneID=445347"]
["TGIF2LX|GeneID=90316",null,null,"OR11H1|GeneID=81061"]
["USP17|GeneID=391627",null,null,"POTEH|GeneID=23784"]
["LOC441294|GeneID=441294",null,null,"GSTT2|GeneID=2953"]
["PRAMEF13|GeneID=400736",null,null,"GSTT2B|GeneID=653689"]
["HLA-DQA1|GeneID=3117",null,null,"OR4K1|GeneID=79544"]
["HLA-DRB6|GeneID=3128",null,null,"OR4K2|GeneID=390431"]
["PRAMEF5|GeneID=343068",null,null,"OR4K5|GeneID=79317"]
["GOLGA6B|GeneID=55889",null,null,"OR4M1|GeneID=441670"]
["GTF2H2D|GeneID=730394",null,null,"OR4N2|GeneID=390429"]
["GTF2H2|GeneID=2966",null,null,"OR4Q3|GeneID=441669"]
["KGFLP1|GeneID=387628",null,null,"OR4K1|GeneID=79544"]
["GSTM1|GeneID=2944",null,null,"OR4K2|GeneID=390431"]
["RRP7A|GeneID=27341",null,null,"OR4K5|GeneID=79317"]
["SNAR-A12|GeneID=100126800",null,null,"OR4M1|GeneID=441670"]
["SNAR-A13|GeneID=100169959",null,null,"OR4N2|GeneID=390429"]
["SNAR-C1|GeneID=100170225",null,null,"OR4Q3|GeneID=441669"]
["SNAR-C2|GeneID=100170218",null,null,"ACOT1|GeneID=641371"]
["SNAR-C5|GeneID=100170223",null,null,"ADAM6|GeneID=8755"]
["SNAR-A1|GeneID=100126798",null,null,"KIAA0125|GeneID=9834"]
["SNAR-A2|GeneID=100126799",null,null,"ADAM3A|GeneID=1587"]
["SNAR-A10|GeneID=100170216",null,null,"LY6K|GeneID=54742"]
["SNAR-A11|GeneID=100169954",null,null,"SCXA|GeneID=100129885"]
["SNAR-A14|GeneID=100191063",null,null,"SCXB|GeneID=642658"]
["SNAR-A3|GeneID=100169951",null,null,"ALKBH6|GeneID=84964"]
["SNAR-A4|GeneID=100169956",null,null,"CLCNKB|GeneID=1188"]
["SNAR-A5|GeneID=100169952",null,null,"FCN3|GeneID=8547"]
["SNAR-A6|GeneID=100169957",null,null,"GSTM1|GeneID=2944"]
["SNAR-A7|GeneID=100169953",null,null,"PPIAL4C|GeneID=653598"]
["SNAR-A8|GeneID=100169958",null,null,"LCE3B|GeneID=353143"]
["SNAR-A9|GeneID=100169955",null,null,"LCE3C|GeneID=353144"]
["SNAR-C4|GeneID=100170219",null,null,"LCE1D|GeneID=353134"]
["SNAR-C3|GeneID=100170226",null,null,"FCGR2C|GeneID=9103"]
["LOC729234|GeneID=729234",null,null,"FCGR3A|GeneID=2214"]
["LOC150763|GeneID=150763",null,null,"FCGR3B|GeneID=2215"]
["DUB3|GeneID=377630",null,null,"HSPA6|GeneID=3310"]
["HLA-DRB5|GeneID=3127",null,null,"HSPA7|GeneID=3311"]
["DEFB103B|GeneID=414325",null,null,"RGS16|GeneID=6004"]
["SPAG11B|GeneID=10407",null,null,"RNASEL|GeneID=6041"]
["DEFB104A|GeneID=140596",null,null,"CFHR1|GeneID=3078"]
["DEFB104B|GeneID=503618",null,null,"ILK|GeneID=3611"]
["DEFB106A|GeneID=245909",null,null,"KIAA0409|GeneID=23378"]
["DEFB106B|GeneID=503841",null,null,"TAF10|GeneID=6881"]
["DEFB105A|GeneID=245908",null,null,"MRGPRX1|GeneID=259249"]
["DEFB105B|GeneID=504180",null,null,"OR4A15|GeneID=81328"]
["DEFB107A|GeneID=245910",null,null,"OR4A16|GeneID=81327"]
["DEFB107B|GeneID=503614",null,null,"YPEL4|GeneID=219539"]
["FAM90A7|GeneID=441317",null,null,"PGA3|GeneID=643834"]
["LOC440295|GeneID=440295",null,null,"PGA4|GeneID=643847"]
["KIAA0125|GeneID=9834",null,null,"DNAJC4|GeneID=3338"]
["ADAM6|GeneID=8755",null,null,"NUDT22|GeneID=84304"]
["SPAG11A|GeneID=653423",null,null,"DUSP22|GeneID=56940"]
["DEFB103A|GeneID=55894",null,null,"C17orf61|GeneID=254863"]
["DEFB4|GeneID=1673",null,null,"KRTAP4-11|GeneID=85282"]
["ZNF280B|GeneID=140883",null,null,"KRTAP9-3|GeneID=83900"]
["ZNF280A|GeneID=129025",null,null,"KRTAP9-4|GeneID=85280"]
["PRAME|GeneID=23532",null,null,"PPY|GeneID=5539"]
["MGC21881|GeneID=389741",null,null,"BAGE|GeneID=574"]
["KGFLP2|GeneID=654466",null,null,"BAGE2|GeneID=85319"]
["RHCE|GeneID=6006",null,null,"BAGE3|GeneID=85318"]
["LOC100240735|GeneID=100240735",null,null,"BAGE4|GeneID=85317"]
["LOC400043|GeneID=400043",null,null,"BAGE5|GeneID=85316"]
["PRAMEF3|GeneID=401940",null,null,"EIF3C|GeneID=8663"]
["PRAMEF22|GeneID=653606",null,null,"EIF3CL|GeneID=728689"]
["hCG_18385|GeneID=646227",null,null,"HIRIP3|GeneID=8479"]
["LOC729355|GeneID=729355",null,null,"POL3S|GeneID=339105"]
["TP53TG3|GeneID=24150",null,null,"C18orf51|GeneID=125704"]
["PRAMEF1|GeneID=65121",null,null,"CXADRP2|GeneID=646243"]
["HNRNPCL1|GeneID=343069",null,null,"LOC727832|GeneID=727832"]
["PRAMEF2|GeneID=65122",null,null,"POTEB|GeneID=339010"]
["PRAMEF4|GeneID=400735",null,null,"SNORD115-10|GeneID=100033447"]
["RHD|GeneID=6007",null,null,"SNORD115-12|GeneID=100033449"]
["HLA-DQA1|GeneID=3117",null,null,"SNORD115-4|GeneID=100033441"]
["HLA-DQB1|GeneID=3119",null,null,"SNORD115-5|GeneID=100033442"]
["LOC391322|GeneID=391322",null,null,"SNORD115-6|GeneID=100033443"]
["GSTT1|GeneID=2952",null,null,"SNORD115-7|GeneID=100033444"]
["GSTTP2|GeneID=653399",null,null,"SNORD115-8|GeneID=100033445"]
["LILRB3|GeneID=11025",null,null,"SNORD115-9|GeneID=100033446"]
["LILRA6|GeneID=79168",null,null,"UGT2B17|GeneID=7367"]
["LILRB5|GeneID=10990",null,null,"XAGE1C|GeneID=653048"]
["PRAMEF15|GeneID=653619",null,null,"XAGE1A|GeneID=653219"]
["PRAMEF9|GeneID=343070",null,null,"XAGE1B|GeneID=653220"]
["PRAMEF14|GeneID=729528",null,null,"XAGE1D|GeneID=9503"]
["REXO1L1|GeneID=254958",null,null,"XAGE1E|GeneID=653067"]
["REXO1L2P|GeneID=441362",null,null,"SPANXB1|GeneID=728695"]
["KRT86|GeneID=3892",null,null,"SPANXB2|GeneID=100133171"]
["KRT83|GeneID=3889",null,null,"SPANXF1|GeneID=171490"]
["KRT85|GeneID=3891",null,null,"RNF181|GeneID=51255"]
["KRT84|GeneID=3890",null,null,"BUB1|GeneID=699"]
["LRRC37A2|GeneID=474170",null,null,"NPHP1|GeneID=4867"]
["ARL17P1|GeneID=51326",null,null,"RGPD6|GeneID=729540"]
["SLC6A8|GeneID=6535",null,null,"RGPD7|GeneID=652919"]
["AMY2A|GeneID=279",null,null,"ANKRD20A1|GeneID=84210"]
["AMY1B|GeneID=277",null,null,"ANKRD20A3|GeneID=441425"]
["AMY1A|GeneID=276",null,null,"AQP7P1|GeneID=375719"]
["AMY1C|GeneID=278",null,null,"AQP7P2|GeneID=389756"]
["OR52N5|GeneID=390075",null,null,"FLJ45983|GeneID=399717"]
["XX-FW88277B6.1|GeneID=541466"]
["RP13-36C9.1|GeneID=728911"]
["RP13-36C9.3|GeneID=441519"]
["CT45-4|GeneID=441520"]
["RP13-36C9.6|GeneID=441521"]
["CT45-6|GeneID=541465"]