{"text_format":"3","workbook":"xls","n_sheets":2,"sheets":["Table S1. top 50, TERTILES","Table S2. top 50, Cox model"],"read":"whole","date_system":"1904","formulas":"cached_only"}

{"sheet":"Table S1. top 50, TERTILES","index":0,"n_rows":54,"n_cols":6,"rows_kept":54,"flags":["formulas_cached_only"]}
[]
["Table S1: - P-values for top-50 gene sets discovered by integrative method (INT) using the competitive gene sets test. Patients from the upper tertile of the survival distribution were labeled as Long Term Survivors, from the lower tertile Short Term Survivors."]
[]
[null,"E1","E2","C1","C2","INT"]
["TRANSLATION_FACTORS",{"v":0.0002,"d":"2.00E-04"},{"v":0.0005,"d":"5.00E-04"},0.0904,0.0547,0.0012]
["HSA03050_PROTEASOME",{"v":0.0004,"d":"4.00E-04"},{"v":0.0003,"d":"3.00E-04"},0.2841,0.7256,0.0037]
["STREPTOMYCIN_BIOSYNTHESIS",0.1046,0.2608,0.6421,0.127,0.0041]
["AMINOSUGARS_METABOLISM",0.0146,0.5662,0.6039,0.0386,0.0076]
["HSA00602_GLYCOSPHINGOLIPID_BIOSYNTHESIS_NEO_LACTOSERIES",0.0387,0.1186,0.3546,0.3712,0.0081]
["HSA00052_GALACTOSE_METABOLISM",0.1387,0.3399,0.5809,0.0081,0.0101]
["GALACTOSE_METABOLISM",0.0329,0.1191,0.4757,0.0383,0.0121]
["BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_LACTOSERIES",0.0244,0.109,0.1938,0.2262,0.0125]
["HSA00860_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM",0.0518,0.061,0.2465,0.3123,0.0137]
["STEMPATHWAY",0.0037,0.2033,0.2263,0.2021,0.0141]
["FRUCTOSE_AND_MANNOSE_METABOLISM",0.2731,0.4586,0.2854,0.02,0.0153]
["HSA00051_FRUCTOSE_AND_MANNOSE_METABOLISM",0.5794,0.2859,0.5325,0.0031,0.0167]
["STARCH_AND_SUCROSE_METABOLISM",0.0334,0.119,0.4998,0.5233,0.0184]
["GLYCOSAMINOGLYCAN_DEGRADATION",0.0069,0.1993,0.0125,0.0213,0.0187]
["IL10PATHWAY",0.1056,0.0566,0.1361,0.1812,0.0213]
["BADPATHWAY",0.2484,0.0479,0.0057,0.0814,0.0224]
["HSA00521_STREPTOMYCIN_BIOSYNTHESIS",0.2603,0.3732,0.756,0.1626,0.0233]
["HSA01031_GLYCAN_STRUCTURES_BIOSYNTHESIS_2",0.0178,0.015,0.5801,0.4162,0.0252]
["ERYTHPATHWAY",0.3604,0.1426,0.0336,0.22,0.0263]
["HSA00624_1_AND_2_METHYLNAPHTHALENE_DEGRADATION",0.0072,0.0685,0.1903,0.5318,0.0267]
["HCMVPATHWAY",0.179,0.2365,0.1773,0.0921,0.0272]
["INFLAMPATHWAY",0.0954,0.2879,0.0683,0.1129,0.0273]
["EOSINOPHILSPATHWAY",0.2653,0.9559,0.0098,0.1976,0.0282]
["IGF1RPATHWAY",0.5754,0.5918,0.0728,0.1988,0.0306]
["AKTPATHWAY",0.211,0.384,0.1532,0.039,0.0307]
["PROTEASOMEPATHWAY",0.0369,0.0624,0.2302,0.7266,0.0332]
["HSA00500_STARCH_AND_SUCROSE_METABOLISM",0.0692,0.2837,0.4822,0.3162,0.034]
["GSK3PATHWAY",0.3281,0.8706,0.1095,0.0344,0.0364]
["CYTOKINEPATHWAY",0.0029,0.1288,0.1847,0.3395,0.0373]
["HSA00520_NUCLEOTIDE_SUGARS_METABOLISM",0.0387,0.0172,0.3401,0.5737,0.0421]
["HSA01032_GLYCAN_STRUCTURES_DEGRADATION",0.0247,0.919,0.5066,0.3353,0.0421]
["1_AND_2_METHYLNAPHTHALENE_DEGRADATION",0.0565,0.0475,0.1803,0.6282,0.0428]
["FXRPATHWAY",0.4225,0.275,0.091,0.1477,0.0433]
["GPCRDB_CLASS_B_SECRETIN_LIKE",0.0119,0.8388,0.2118,0.4073,0.0435]
["CFTRPATHWAY",0.1888,0.0899,0.5283,0.5722,0.0476]
["WNTPATHWAY",0.5933,0.0648,0.4605,0.1656,0.0495]
["HSA00530_AMINOSUGARS_METABOLISM",0.0356,0.327,0.6579,0.518,0.0513]
["HSA05217_BASAL_CELL_CARCINOMA",0.0984,0.0278,0.2898,0.1186,0.0517]
["PANTOTHENATE_AND_COA_BIOSYNTHESIS",0.0544,0.1591,0.6374,0.0701,0.052]
["HSA00062_FATTY_ACID_ELONGATION_IN_MITOCHONDRIA",0.8944,0.0845,0.0061,0.0365,0.0521]
["HSA03060_PROTEIN_EXPORT",0.3873,0.1414,0.0918,0.1358,0.0523]
["NUCLEOTIDE_SUGARS_METABOLISM",0.0185,0.0097,0.5835,0.4986,0.0542]
["HSA00740_RIBOFLAVIN_METABOLISM",0.3809,0.0821,0.5542,0.207,0.0544]
["GLUCONEOGENESIS",0.1514,0.0613,0.8422,0.4677,0.0557]
["GLYCOLYSIS",0.1514,0.0613,0.8422,0.4677,0.0557]
["HSA00531_GLYCOSAMINOGLYCAN_DEGRADATION",0.0249,0.5324,0.0157,0.0562,0.0557]
["VEGFPATHWAY",0.134,0.2731,0.1226,0.4975,0.0592]
["IL2PATHWAY",0.2621,0.1448,0.3753,0.1236,0.0595]
["CDMACPATHWAY",0.2834,0.0147,0.3594,0.4118,0.0597]
["HSA04614_RENIN_ANGIOTENSIN_SYSTEM",0.7622,0.9531,0.1608,0.0426,0.0611]

{"sheet":"Table S2. top 50, Cox model","index":1,"n_rows":54,"n_cols":6,"rows_kept":54,"flags":["formulas_cached_only"]}
["Table S2: - P-values for top-50 gene sets discovered by integrative method (INT) using the competitive gene sets test. Cox regression model was used to establish gene-to-phenotype association scores. "]
[]
[]
[null,"E1","E2","C1","C2","INT"]
["STREPTOMYCIN_BIOSYNTHESIS",0.1801,0.0881,0.5729,0.0142,0.0015]
["FRUCTOSE_AND_MANNOSE_METABOLISM",0.2144,0.4654,0.2159,0.2062,0.0025]
["HSA00860_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM",0.0012,0.3394,0.6577,0.035,0.0034]
["IL10PATHWAY",0.0714,0.1807,0.2745,0.0037,0.0042]
["KREBS_TCA_CYCLE",0.7265,0.2075,0.1104,0.0132,0.0052]
["AMINOSUGARS_METABOLISM",0.0653,0.8567,0.6869,0.0733,0.0068]
["IL5PATHWAY",0.3059,0.1,0.0276,0.0147,0.009]
["HSA00521_STREPTOMYCIN_BIOSYNTHESIS",0.2869,0.2174,0.6853,0.03,0.0095]
["CYTOKINEPATHWAY",0.0219,0.0664,0.3151,0.1279,0.0115]
["HSA05217_BASAL_CELL_CARCINOMA",0.2099,0.0478,0.0473,0.0058,0.0125]
["ERYTHPATHWAY",0.1854,0.2397,0.1673,0.2813,0.0138]
["PORPHYRIN_AND_CHLOROPHYLL_METABOLISM",0.0583,0.5944,0.5893,0.0095,0.0146]
["TRANSLATION_FACTORS",0.0098,0.0916,0.4676,0.0759,0.0149]
["STARCH_AND_SUCROSE_METABOLISM",0.0226,0.0618,0.536,0.5122,0.0178]
["HSA00330_ARGININE_AND_PROLINE_METABOLISM",0.2891,0.1305,0.7679,0.2125,0.0192]
["STEMPATHWAY",0.0266,0.1444,0.5245,0.2136,0.0212]
["KREBPATHWAY",0.49,0.3643,0.8622,0.044,0.0247]
["IL1RPATHWAY",0.0269,0.262,0.0193,0.0025,0.0249]
["WNTPATHWAY",0.7474,0.0564,0.0845,0.0042,0.0265]
["GLYCOLYSIS_AND_GLUCONEOGENESIS",0.524,0.0354,0.2141,0.231,0.0285]
["HSA01032_GLYCAN_STRUCTURES_DEGRADATION",0.0973,0.9499,0.4391,0.2545,0.0344]
["EOSINOPHILSPATHWAY",0.3045,0.6016,0.0507,0.2052,0.0359]
["HSA00531_GLYCOSAMINOGLYCAN_DEGRADATION",0.1589,0.5147,0.0396,0.0196,0.036]
["MONOAMINE_GPCRS",0.0401,0.4001,0.0317,0.216,0.0366]
["INFLAMPATHWAY",0.4471,0.3505,0.1905,0.1111,0.038]
["UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS",0.0141,0.017,0.4264,0.025,0.038]
["HSA03050_PROTEASOME",0.0131,0.0225,0.4958,0.1161,0.0384]
["GALACTOSE_METABOLISM",0.1469,0.1379,0.328,0.3333,0.0393]
["HSA00642_ETHYLBENZENE_DEGRADATION",0.1611,0.0456,0.0221,0.1052,0.0405]
["HSA00051_FRUCTOSE_AND_MANNOSE_METABOLISM",0.4067,0.6032,0.3409,0.1211,0.0433]
["PANTOTHENATE_AND_COA_BIOSYNTHESIS",0.0118,0.1126,0.3498,0.0514,0.0482]
["WNT_SIGNALING",0.4361,0.0374,0.0631,0.0175,0.0562]
["BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_LACTOSERIES",0.0095,0.0786,0.409,0.7706,0.0564]
["HSA04710_CIRCADIAN_RHYTHM",0.1061,0.124,0.0734,0.3906,0.0574]
["GPCRDB_CLASS_B_SECRETIN_LIKE",0.0053,0.4888,0.1115,0.349,0.0579]
["HSA00500_STARCH_AND_SUCROSE_METABOLISM",0.0552,0.7583,0.6079,0.4884,0.0589]
["HSA04310_WNT_SIGNALING_PATHWAY",0.6428,0.0039,{"v":0.0003,"d":"3.00E-04"},0,0.0596]
["GLYCOSAMINOGLYCAN_DEGRADATION",0.1501,0.3211,0.1017,0.0221,0.0645]
["HEME_BIOSYNTHESIS",0.0574,0.1719,0.6285,0.3646,0.0652]
["HSA00902_MONOTERPENOID_BIOSYNTHESIS",0.0595,0.4618,0.0803,0.059,0.066]
["HSA00601_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTOSERIES",0.0071,0.2283,0.7483,0.9033,0.0664]
["VEGFPATHWAY",0.2573,0.7153,0.3988,0.3982,0.0667]
["HSA00052_GALACTOSE_METABOLISM",0.3344,0.2922,0.3485,0.1575,0.0674]
["HSA00785_LIPOIC_ACID_METABOLISM",0.349,0.9508,0.2374,0.7629,0.0694]
["HSA00020_CITRATE_CYCLE",0.5852,0.1141,0.2056,0.0342,0.0765]
["HSA00040_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS",0.0064,0.793,0.6876,0.7128,0.0765]
["AHSPPATHWAY",0.0196,0.2389,0.5716,0.7186,0.0791]
["SLRPPATHWAY",0.3178,0.0418,0.0865,0.1842,0.0794]
["HSA03060_PROTEIN_EXPORT",0.3215,0.1447,0.0969,0.1282,0.0817]
["RNA_TRANSCRIPTION_REACTOME",0.1217,0.1455,0.096,0.3853,0.0853]