{"text_format":"3","workbook":"xls","n_sheets":18,"sheets":["formate UP ","formate DOWN","protocatechuate UP","protocatechuate DOWN","4-hydroxybenzoate UP","4-hydroxybenzoate DOWN","phenylalnine UP","phenylalanine DOWN","proline UP","proline DOWN","N-limited UP","N-limited DOWN","L-arabinose UP","L-arabinose DOWN","galactose UP","galactose DOWN","arabinogalactan UP","arabinogalactan DOWN"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"formate UP ","index":0,"n_rows":59,"n_cols":4,"rows_kept":59,"flags":["formulas_cached_only"]}
["Table S3. i) Normalised expression of genes from a single microarray elevated ≥3-fold, p≤0.05 in Rlv3841 grown on formate   "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["pRL120342",17.84089,0.0134488195,"hspD"]
["RL1507",12.493872,0.020440178,""]
["RL1631",9.185374,0.016688744,"napC"]
["pRL90019",8.979075,0.038749807,"fixK"]
["RL1651",8.045136,0.020156274,""]
["pRL120416",7.9540586,0.016983952,"dadX"]
["RL3444",7.2514524,0.025668325,""]
["pRL110426",5.9834714,0.021182304,""]
["RL1840",5.8534193,0.0117334295,""]
["RL2610",5.77515,0.046438705,""]
["RL3085",5.768622,0.0034830195,""]
["RL3592",5.663714,0.022032678,""]
["RL4169",5.6215615,0.009746772,""]
["RL3186",5.4214587,0.029524524,""]
["RL1106",5.330366,0.03863055,""]
["RL4098",4.920497,0.00423295,""]
["pRL110321",4.884518,0.01663849,""]
["RL1841",4.553338,0.014180865,""]
["pRL110005",4.4931707,0.0038606403,""]
["RL3024",4.470655,0.010815746,""]
["RL0913",4.4470224,0.0017277779,""]
["pRL110014",4.4082847,0.029633509,"msrA"]
["RL1071",4.389112,0.043852784,""]
["RL4393",4.294385,0.0025946146,"fdsG"]
["RL3489",4.256143,0.041342262,""]
["RL3151",4.212132,0.017099096,""]
["RL3457",4.1802216,0.0029210488,""]
["RL2482",4.0804915,0.015965069,""]
["pRL110311",4.053339,0.022799795,""]
["RL3868",4.0123825,0.0054035923,""]
["pRL90069",3.7609906,0.024451781,""]
["pRL120756",3.7363913,0.045484237,""]
["pRL90025",3.6961455,0.041546024,""]
["pRL110007",3.6331272,0.0059896745,"ecfR"]
["pRL90174",3.549827,0.0005182617,"adc"]
["RL1834",3.5360348,0.02869875,""]
["pRL110006",3.5272725,0.04903277,""]
["pRL110546",3.509981,0.028730499,"minC"]
["RL4195",3.4930797,0.016362451,""]
["RL4614",3.490944,0.019740479,"rpoH2"]
["RL0963",3.4869227,0.011292585,""]
["RL0439",3.48577,0.00534552,""]
["RL4099",3.4716988,0.0024794163,""]
["RL0324",3.3975627,0.004983286,""]
["pRL120766",3.3957078,0.033713374,""]
["RL2585",3.3701115,0.022662021,"nodX"]
["pRL90242",3.3239374,0.022445088,""]
["RL2554",3.307137,0.016393276,""]
["pRL90066",3.2441483,0.017186275,""]
["pRL100322",3.1266997,0.03054577,""]
["pRL120245",3.0975428,0.036896106,""]
["RL2199",3.0587509,0.032619312,""]
["RL3181",3.0562086,0.013695063,""]
["RL2561",3.0222054,0.017834635,""]

{"sheet":"formate DOWN","index":1,"n_rows":31,"n_cols":4,"rows_kept":31,"flags":["formulas_cached_only"]}
["Table S3. ii) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on formate   "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL3754",0.32970843,0.0132862,""]
["RL2748",0.32685092,0.024264697,""]
["RL1605",0.3259088,0.04566944,"aspS"]
["RL2557",0.32485402,0.043338183,""]
["RL0605",0.31875932,0.0116946595,""]
["RL2571",0.31311038,0.023617318,""]
["RL4139",0.30335325,0.026291799,""]
["RL2881",0.30298284,0.011701097,""]
["RL0724",0.29644954,0.025136337,"motC"]
["RL0270",0.29376906,0.020949552,"pheT"]
["RL0212",0.28680804,0.009955388,"cpaA"]
["RL4067",0.2812684,0.005122134,""]
["RL1483",0.27960005,0.032029204,""]
["RL4386",0.27790147,0.008019076,"cheW2"]
["RL4661",0.27196014,0.032267608,""]
["RL3852",0.2706587,0.006040618,""]
["RL0718",0.26683307,0.048670325,"flaA"]
["RL2684",0.2628108,0.011995225,""]
["RL4031",0.25403515,0.029202841,"mcrA"]
["RL3985",0.24441676,0.04452311,"mcpO"]
["pRL120455",0.24336718,0.04324004,""]
["RL4032",0.24295627,0.036243543,"mcrB"]
["RL0717",0.19774601,0.01982487,""]
["RL0522",0.13597487,0.018599074,""]
["RL1618",0.1165979,0.033064082,""]
["RL4709",0.11187921,0.00094840094,""]

{"sheet":"protocatechuate UP","index":2,"n_rows":197,"n_cols":4,"rows_kept":197,"flags":["formulas_cached_only"]}
["Table S3. iii) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on protocatechuate  "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL1911",39.69824,0.00044948867,""]
["pRL100170",20.451586,3.944398e-06,"rhiB"]
["pRL100171",20.272251,0.0001254523,"rhiC"]
["RL2603",18.799356,0.0013005096,""]
["pRL120500",17.95396,3.0910905e-06,""]
["RL1483",17.776943,0.001166335,""]
["RL4267",16.725319,3.5848561e-06,"acoD"]
["pRL110484",16.395315,0.002423825,""]
["pRL100169",14.611365,0.0001897636,"rhiA"]
["pRL110087",13.92117,2.9066527e-05,"pcaH1"]
["pRL100164",12.986507,0.0019728304,"rhiI"]
["pRL110089",12.892508,9.0854655e-06,""]
["pRL110268",11.511247,0.0005911578,""]
["pRL120499",11.128113,0.0003562641,""]
["pRL110311",10.981666,4.557446e-05,""]
["RL1653",10.502587,0.00013504033,""]
["RL3840",10.053362,0.00012818941,""]
["pRL110496",9.942339,0.00012304832,""]
["RL3041",9.595133,0.00082547875,""]
["RL3374",9.588738,1.8309642e-05,""]
["RL2259",9.5725,6.6925124e-05,""]
["RL2872",9.571134,0.00018055223,""]
["RL3456",9.171413,0.00062185817,""]
["RL0178",8.667734,0.0024216669,""]
["RL1918",8.606071,0.0036039813,""]
["RL3666",8.445346,0.004397227,""]
["RL2418",8.362874,0.008717382,""]
["RL1924",8.173559,0.00030296543,""]
["pRL110488",8.145966,8.089491e-06,""]
["RL4062",8.086486,0.019133417,""]
["RL0150",7.896283,0.001095538,""]
["RL2308",7.8239737,0.00011934218,""]
["pRL100277",7.788634,0.0006101925,""]
["RL2637",7.769686,0.011278507,"recA"]
["RL0479",7.636941,0.002041173,"prdF"]
["RL0232",7.542947,0.009744088,"optF"]
["pRL110252",7.4959335,0.006618069,""]
["RL0292",7.4550724,0.0015914848,""]
["RL1910",7.4189806,0.00012761758,""]
["RL4709",7.410921,0.00045987006,""]
["RL0037",7.1422195,9.049537e-06,"pckA"]
["RL0404",7.114072,0.00247374,"mviN"]
["RL3046",7.097195,0.0014421657,""]
["pRL100163",6.9380975,4.0593536e-06,""]
["RL1860",6.8822036,0.00069399003,"phhA"]
["RL2861",6.8613806,8.699518e-06,""]
["RL0365",6.8086123,0.008194343,""]
["RL3154",6.7474685,0.0006486876,""]
["RL4268",6.6690083,3.45306e-05,""]
["RL0381",6.628381,0.0005926575,"hrcA"]
["pRL120340",6.5207167,0.00020479826,""]
["RL3959",6.489572,0.00024817017,""]
["RL1274",6.4742885,0.0006477065,""]
["RL4274",6.315814,0.0034645165,""]
["pRL100385",6.249458,0.010248101,""]
["RL1455",6.2057543,8.815695e-05,""]
["RL0760",6.157279,0.00079479074,""]
["RL0998",6.10653,0.0072387215,""]
["RL0569",6.089647,0.00056478946,""]
["RL0467",6.0428314,0.00451734,""]
["pRL110288",5.9481015,1.8049474e-05,"pcaJ"]
["pRL110603",5.9216695,0.00034613846,""]
["RL2865",5.9201508,6.8555695e-05,""]
["RL0078",5.886878,0.019933112,""]
["RL3349",5.8750973,0.022028608,""]
["pRL110086",5.6727967,0.00012127109,"pcaG"]
["RL1328",5.6034913,0.008305628,""]
["RL1925",5.579721,0.0066757086,""]
["RL0094",5.56642,0.0061561707,""]
["RL3172",5.51972,0.006791693,""]
["RL3325",5.4842834,4.1673466e-06,""]
["pRL110287",5.446782,0.0047427984,"pcaI"]
["RL1121",5.375102,0.018004218,""]
["RL2863",5.3741736,0.0014404547,""]
["pRL110014",5.372854,0.0027756,"msrA"]
["pRL110088",5.3427114,0.00019208946,"pcaC"]
["pRL120225",5.2808256,0.00015118775,""]
["RL1473",5.2541623,0.0021909538,""]
["RL1389",5.2399025,0.0019027416,""]
["RL0198",5.2160897,0.0010228378,""]
["pRL120312",5.130267,0.004795197,"mcpC"]
["RL2877",5.1038413,0.00013384235,""]
["RL2129",4.950505,0.016336106,""]
["RL2950",4.9422507,0.0018346496,""]
["RL2554",4.9223747,0.0012749146,""]
["pRL70167",4.9214478,0.002592673,""]
["pRL80033",4.8813972,0.015312514,""]
["RL1390",4.8449764,0.021712983,""]
["RL3045",4.7682614,0.00018707626,"ctaC2"]
["pRL110043",4.762408,0.0001497507,""]
["RL4640",4.740116,0.0011494425,"ndvA"]
["RL0949",4.730336,0.000106162915,"mcpJ"]
["RL3906",4.728105,0.0004204166,""]
["RL1316",4.6737614,0.037168104,"tam"]
["pRL110565",4.6644073,7.2059606e-08,""]
["RL2756",4.642721,0.00085860374,""]
["RL3384",4.602592,0.0028590707,""]
["pRL100172",4.550215,0.00026153927,"rhiR"]
["RL0974",4.5411687,0.017965684,""]
["pRL90286",4.5146556,2.5116587e-05,""]
["RL0066",4.5071793,0.0006816319,""]
["RL4581",4.4806476,0.00073302345,""]
["pRL110353",4.4750752,0.00075434434,""]
["RL2867",4.414204,0.009261753,""]
["RL3437",4.4051633,0.002098111,""]
["RL1908",4.404385,2.434603e-05,""]
["RL0652",4.401703,0.01879204,""]
["RL3911",4.3592963,0.00010086218,"rapB"]
["RL1482",4.3583183,0.0014088006,"hisC3"]
["RL0503",4.3444905,0.017562205,"otsA"]
["pRL100390",4.3080444,0.018852018,""]
["RL4654",4.2898836,0.0064001633,"intB"]
["RL2482",4.21631,0.0046141422,""]
["RL2264",4.2000747,0.0002769112,""]
["RL3058",4.158345,0.00014975865,""]
["pRL100405",4.1522775,0.0009880692,""]
["RL3151",4.1491323,0.0007286125,""]
["RL0054",4.1199446,0.0017714138,"glcB"]
["RL0088",4.0805216,5.8317215e-05,""]
["RL3787",4.061643,0.0072662695,""]
["pRL90066",4.060606,0.00019042288,""]
["RL0914",4.0342865,0.00022653423,""]
["RL3040",4.029016,0.0105036795,""]
["pRL110490",4.005908,0.008594979,""]
["RL3042",3.9475045,0.0006215176,"cyoC1"]
["pRL110495",3.9258113,0.0017779949,""]
["pRL120541",3.9152012,3.5088633e-05,""]
["RL2430",3.915051,0.00071018544,""]
["RL3449",3.9024203,0.0029041178,"cspA4"]
["RL3186",3.8966208,0.016411966,""]
["RL4614",3.8900979,0.005530977,"rpoH2"]
["RL3256",3.8767214,0.001185122,"thyA"]
["RL0130",3.8691938,0.000984842,""]
["RL2602",3.8595107,0.0016796846,""]
["RL3223",3.8573585,1.7039029e-05,"nolA"]
["pRL110257A",3.8546638,0.0008363653,""]
["pRL110400",3.8199635,0.010712354,""]
["RL4689",3.7812843,5.2057745e-05,""]
["RL2258",3.752609,0.013201651,""]
["pRL100155",3.7369788,0.0009708722,""]
["RL2262",3.7163136,0.004429516,""]
["RL0063",3.714984,0.00041576804,""]
["pRL70166",3.6878128,0.0047350884,""]
["RL1035",3.6753461,0.019456062,""]
["pRL110354",3.5855114,0.025048865,""]
["RL2136",3.5756438,0.004439171,""]
["pRL110469",3.5599768,0.0025816578,""]
["RL2524",3.5435405,0.0023277947,""]
["RL1125",3.5394065,0.0015591166,""]
["RL1920",3.5249789,0.0003417852,""]
["RL1520",3.5230846,0.0061144033,""]
["RL2063",3.5089102,0.004519329,""]
["pRL110221",3.5084167,0.0006591439,""]
["RL1909",3.5075376,0.00017171915,""]
["pRL120593",3.5047946,0.0015081278,""]
["RL3495",3.4738011,0.0012225863,""]
["RL3274",3.4617693,0.00046216356,"prkA"]
["RL2031",3.457348,0.017026346,""]
["pRL110321",3.446631,1.9160361e-05,""]
["pRL100404",3.4453452,0.0071173287,"mctP"]
["RL4066",3.4438581,7.4626376e-05,""]
["RL1503",3.417518,0.00806953,""]
["RL3044",3.4175134,0.012171018,"ctaD2"]
["pRL120475",3.4167924,0.036100835,"impA"]
["RL0561",3.4076746,0.0014092126,""]
["RL0324",3.404649,6.8263005e-05,""]
["RL0963",3.4040315,0.017461592,""]
["RL2870",3.396573,0.024692418,""]
["pRL110289",3.3952374,0.0010236256,"pcaF"]
["RL3093",3.3906453,0.03491487,""]
["RL0245",3.3710692,0.0030111682,""]
["RL0593",3.3297677,0.008822074,""]
["RL1791",3.3013167,0.012316838,"rpsE"]
["pRL110586",3.2993793,0.003644178,""]
["RL0761",3.2886448,0.0026711947,"aceA"]
["RL4012",3.252221,0.001334578,""]
["RL2153",3.2507257,0.0008915932,""]
["RL3378",3.2391,0.0001721875,"cinI"]
["RL0091",3.236564,0.0003082417,""]
["pRL120497",3.221567,0.013015548,""]
["RL4266",3.195384,0.004773448,""]
["pRL100322",3.1884885,2.0935277e-06,""]
["pRL110251",3.1828263,0.0070362915,""]
["RL4534",3.115657,0.0038048397,""]
["RL2871",3.098441,0.008168251,""]
["RL0718",3.0968595,4.4979213e-05,"flaA"]
["RL2448",3.0699167,0.0060505066,""]
["RL1922",3.0355275,0.0007851169,""]
["RL2119",3.0247416,4.9824917e-05,""]
["RL3711",3.0242138,0.04279091,""]
["RL3401",3.0071783,0.00082392036,""]
["pRL110605",3.0041375,1.6031501e-05,""]

{"sheet":"protocatechuate DOWN","index":3,"n_rows":108,"n_cols":4,"rows_kept":108,"flags":["formulas_cached_only"]}
["Table S3. iv) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on protocatechuate  "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL4549",0.32940468,1.5496692e-11,""]
["RL3540",0.32937804,0.0026338515,"braC3"]
["RL2221",0.32909822,0.0045298575,"rpsB"]
["RL0118",0.327711,0.0062466147,"fabI1"]
["pRL70128",0.32754827,0.0061549894,""]
["RL4258",0.32602134,0.00015709871,"nrdF"]
["RL0499",0.32565537,0.018885458,""]
["RL4436",0.32524112,0.036218654,"sucD"]
["RL0267",0.32522172,1.679126e-16,"rpmI"]
["RL1777",0.3245065,0.004193678,"rplB"]
["pRL110040",0.3227381,0.0027368243,"cyoCp11"]
["RL1798",0.32261974,0.0009808203,"rpoA"]
["RL4503",0.32117042,0.026714243,""]
["RL0156",0.3206401,9.051834e-05,""]
["RL1691",0.31961304,0.011871123,"hupA1"]
["RL0328",0.31854025,0.039414156,""]
["RL0926",0.3171054,0.00046039186,"atpE"]
["RL1605",0.31436396,0.0043327035,"aspS"]
["RL0921",0.31416622,0.0003793472,""]
["pRL90123",0.31365877,0.0012659428,""]
["RL2556",0.31326562,0.0072242594,""]
["RL4409",0.31106234,0.00021243347,"atpA"]
["RL4520",0.310561,0.00024523173,""]
["RL1086",0.30961838,0.0012442155,"ppdK"]
["RL1757",0.30873886,0.00070219307,"tufB1"]
["RL0822",0.3086851,0.008971187,""]
["RL1945",0.3067537,0.008670461,""]
["pRL110375",0.30606544,0.0024119571,"ropA3"]
["RL1265",0.30406514,0.036417495,""]
["RL4410",0.30364382,0.035906438,"atpH"]
["RL1302",0.3035143,0.0017745236,""]
["RL4507",0.30323443,0.0007813333,"dcp"]
["RL3303",0.30077955,0.0048075705,""]
["RL4722",0.29878023,0.0031618103,"purH"]
["RL3677",0.29582047,0.0071964026,"lspL"]
["RL3622",0.2958095,0.001556679,"idhA"]
["RL1762",0.2956839,0.00016475887,"rplA"]
["pRL120173",0.29473388,0.012532593,""]
["pRL100058",0.2943195,0.03174488,""]
["RL1782",0.2938095,0.0010166122,"rpmC"]
["pRL80102",0.29363,0.01592299,""]
["RL4407",0.29291704,0.00026786333,"atpD"]
["RL1788",0.28961796,0.00063776603,"rpsH"]
["RL4248",0.2893203,0.0035655638,"lacZ"]
["RL1761",0.28592092,0.010382528,"rplK"]
["RL3960",0.28528732,0.0006910982,""]
["RL1781",0.28496632,0.0012373133,"rplP"]
["RL0824",0.2830104,0.0059950287,""]
["RL1556",0.2805308,0.0017158202,""]
["RL3895",0.2741464,0.015344231,""]
["RL1792",0.27272937,0.002165564,"rpmD"]
["RL4249",0.26968798,1.6581596e-06,""]
["RL1769",0.26875085,0.0036944316,"rpsL"]
["RL3331",0.26864886,0.0103749,"metF"]
["RL4185",0.26543847,0.001049139,"lysS"]
["RL1672",0.2653251,0.0006998807,"rpsI"]
["RL1778",0.26417002,0.013984299,"rpsS"]
["RL4405",0.2622328,0.00017436025,"atpC"]
["RL1425",0.2621102,0.009049099,"gstA1"]
["RL1793",0.26204827,0.0008114151,"rplO"]
["RL1799",0.26000026,0.000178643,"rplQ"]
["RL1554",0.2567133,0.000653132,"rpsR"]
["RL4550",0.25517574,0.010523612,"rimM"]
["RL1776",0.2550564,0.00087207864,"rplW"]
["RL4715",0.25421622,0.009523097,"asd"]
["RL4250",0.25384867,6.2798854e-06,""]
["RL2222",0.25124508,0.0034476586,"tsf"]
["RL4086",0.24983968,0.0005857614,"ltaE"]
["RL4065",0.24804878,0.0108484905,""]
["pRL90074",0.2472701,3.8393875e-05,"glyD"]
["pRL110532",0.24275063,1.4777335e-05,""]
["RL1555",0.24223587,0.0005930008,"rpsF"]
["RL0595",0.24113184,0.0016558979,"cspA1"]
["RL1775",0.24050234,3.782332e-05,"rplD"]
["RL0385",0.2394605,0.0068726945,""]
["RL4408",0.23815274,0.004582261,"atpG"]
["pRL100451",0.23690188,0.0019659293,"rapA2"]
["RL0852",0.23645635,0.022457147,""]
["RL1764",0.23434511,0.013529958,"rplJ"]
["RL1109",0.23083341,0.0075564426,""]
["RL1765",0.22747794,0.0023807932,"rplL"]
["pRL110531",0.21878412,0.00048463861,""]
["RL1770",0.21200591,0.0006922018,"rpsG"]
["RL1763",0.2085249,0.00010939468,""]
["RL0647",0.20801227,0.0004911452,""]
["RL3686",0.20661734,4.718568e-05,""]
["RL1507",0.20342939,0.015553326,""]
["RL1774",0.19785006,0.00031648888,"rplC"]
["RL1238",0.1942738,0.001497369,""]
["RL1046",0.190751,0.0052681016,""]
["RL4564",0.18986501,0.0030164863,"amtB"]
["RL1783",0.18409774,7.013607e-06,"rpsQ"]
["pRL110617",0.17797743,0.021107007,"nadA"]
["RL0884",0.17151342,8.6573647e-07,"groSch1"]
["RL4521",0.16999488,0.0065316265,""]
["RL2829",0.1691045,0.0039774994,"cobO"]
["RL3549",0.1504722,0.00030560407,"glnII"]
["RL0883",0.14227301,0.00024764994,"groLch1"]
["RL3625",0.12351001,0.016238272,""]
["RL3286",0.10653188,0.010112599,""]
["RL3626",0.10627685,0.0035213195,""]
["RL1369",0.10276766,0.0013646125,""]
["RL3624",0.053325623,6.4384567e-06,""]

{"sheet":"4-hydroxybenzoate UP","index":4,"n_rows":42,"n_cols":4,"rows_kept":42,"flags":["formulas_cached_only"]}
["Table S3. v) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on hydroxybenzoate  "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["pRL110087",43.418575,8.111353e-05,"pcaH1"]
["pRL110089",40.335224,8.508263e-05,""]
["RL3906",29.782661,1.3157513e-05,""]
["RL3908",19.364733,5.2247837e-05,""]
["RL0760",19.354223,0.00012989104,""]
["pRL110288",18.264524,1.6459937e-05,"pcaJ"]
["pRL110088",16.227652,8.73589e-05,"pcaC"]
["RL0037",16.181787,3.3237784e-06,"pckA"]
["pRL110086",15.723078,1.617198e-05,"pcaG"]
["pRL110287",13.691044,1.1476528e-06,"pcaI"]
["RL3907",11.279832,0.0002025414,""]
["RL3905",10.875936,0.00048905436,"pobA"]
["pRL110289",9.539897,2.0423857e-05,"pcaF"]
["RL0761",8.842172,0.00015969652,"aceA"]
["RL4012",7.405995,0.0005296272,""]
["pRL110085",7.2245836,0.0010679263,""]
["pRL100171",6.1816797,0.00020414793,"rhiC"]
["pRL100170",5.6224117,0.0033355877,"rhiB"]
["pRL100164",5.592694,6.4484186e-05,"rhiI"]
["RL3910",5.52462,0.0008369517,""]
["pRL110484",5.3697014,0.0020964295,""]
["RL3909",4.240072,2.6001904e-05,""]
["pRL90259",4.177903,0.0010629217,""]
["RL4587",3.9311237,4.3178457e-05,""]
["pRL100163",3.8301282,0.000107894455,""]
["pRL120500",3.7838314,0.008760751,""]
["RL1052",3.3905284,0.010959809,""]
["pRL100404",3.3093,0.0006228182,"mctP"]
["pRL100405",3.260136,0.018958095,""]
["pRL70151",3.223089,0.001583455,""]
["pRL90258",3.2110598,0.005824071,""]
["RL1479",3.1156101,0.0055116965,""]
["RL3456",3.0970616,0.00020422031,""]
["RL1473",3.0880716,9.257546e-07,""]
["RL1805",3.0412467,0.03001583,""]
["pRL110311",3.0170925,0.00083673076,""]
["RL2418",3.0151854,0.016543353,""]

{"sheet":"4-hydroxybenzoate DOWN","index":5,"n_rows":29,"n_cols":4,"rows_kept":29,"flags":["formulas_cached_only"]}
["Table S3. vi) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on hydroxybenzoate  "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL4250",0.31353104,7.404704e-06,""]
["RL3051",0.31308874,0.0041637733,""]
["RL0852",0.29215392,0.003583131,""]
["RL1791",0.29037535,0.018839194,"rpsE"]
["RL3623",0.28477073,0.0027301759,""]
["RL1133",0.28223658,0.029742954,""]
["RL1743",0.24601756,0.016607655,""]
["RL4249",0.23994821,0.0043641897,""]
["RL1507",0.2367689,0.007469809,""]
["RL2588",0.2260239,0.0036925818,"tyrS1"]
["RL1131",0.20458798,0.046846297,""]
["RL0966",0.20365483,0.025955614,""]
["RL0634",0.193603,0.00036585037,""]
["RL1074",0.19258828,0.018822497,""]
["pRL110009",0.18835767,0.0017448369,"hmrR1"]
["pRL110531",0.18326439,0.00041274913,""]
["RL4252",0.17858526,0.00023529395,""]
["pRL120167",0.15936273,0.024304073,""]
["RL0658",0.1425305,0.027092265,""]
["RL3626",0.13512056,0.00068530213,""]
["RL0173",0.13503547,0.015356405,"phnK"]
["RL1014",0.12906845,0.0046701217,"pdxH"]
["RL3625",0.067447975,0.0028554765,""]
["RL3624",0.058116153,0.00020545533,""]

{"sheet":"phenylalnine UP","index":6,"n_rows":160,"n_cols":4,"rows_kept":160,"flags":["formulas_cached_only"]}
["Table S3. vii) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on phenylalanine "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL1860",166.32545,0.006355039,"phhA"]
["pRL100170",128.45503,0.0037252067,"rhiB"]
["RL1911",113.19745,0.0028178373,""]
["RL1863",84.218,0.00024345507,"hpd"]
["RL3741",79.909035,0.0029407616,""]
["RL1864",73.033615,0.020931592,"hmgA"]
["pRL100171",44.623238,0.0006249445,"rhiC"]
["pRL120637",42.091236,0.0032803873,""]
["pRL100169",40.702072,0.03220031,"rhiA"]
["RL1865",33.393177,0.007664359,""]
["RL1866",33.28263,0.012753541,"hmgC"]
["RL3737",28.080412,0.014485393,""]
["RL1918",26.5182,0.02547586,""]
["RL2425",26.007326,0.003384959,""]
["RL2418",25.879776,0.020531414,""]
["pRL100164",23.573605,0.004999142,"rhiI"]
["RL1924",23.158058,0.021330351,""]
["RL3740",21.89104,0.00952321,""]
["RL1910",21.391253,0.00063806603,""]
["pRL100344",21.118727,0.024083821,""]
["pRL110496",16.120104,0.010491414,""]
["RL0150",15.168825,0.0049393326,""]
["RL2424",12.061362,0.041004572,""]
["RL1483",10.511077,0.006769433,""]
["pRL110252",10.508882,0.007724559,""]
["RL3738",10.508501,0.0075917253,""]
["RL1917",10.494175,0.007463188,""]
["pRL110311",9.588265,0.022337217,""]
["pRL110268",9.420494,0.015749022,""]
["RL3370",9.263917,0.0048035877,""]
["RL2603",9.070781,0.017990606,""]
["RL3374",8.668685,0.024556689,""]
["RL2187",8.6585655,0.0010921694,""]
["pRL110484",8.532835,0.005232802,""]
["RL2717",8.439072,0.03727714,"glpK3"]
["RL4564",8.17582,0.023448683,"amtB"]
["RL4565",8.033891,0.028107502,"glnK"]
["RL3235",7.9021707,0.0051142704,""]
["RL3549",7.8860936,0.0311861,"glnII"]
["RL2769",7.59202,0.019406911,"ssuD"]
["RL3154",7.550054,0.04311048,""]
["RL3867",7.4921007,0.016976263,""]
["pRL110257A",7.3924975,0.020792251,""]
["RL3701",7.2555275,0.001327007,""]
["RL2877",7.1437197,0.045939486,""]
["RL2031",7.097499,0.031565916,""]
["pRL110007",6.758281,0.0054446994,"ecfR"]
["RL0718",6.396885,0.017546222,"flaA"]
["RL1908",6.3339133,0.010570676,""]
["RL3186",6.2017574,0.00317276,""]
["pRL110251",6.064843,0.009616204,""]
["RL2029",6.001503,0.007421314,""]
["pRL90017",5.991984,0.004802362,"fixO2"]
["RL2874",5.8721094,0.019640524,""]
["pRL120305",5.7285476,0.024238648,""]
["RL3236",5.462798,0.014428782,""]
["RL4691",5.448805,0.02827366,""]
["RL4371",5.353159,0.010544661,""]
["RL3959",5.3522763,0.02041261,""]
["RL2722",5.3308783,0.023016246,""]
["pRL120306",5.216223,0.0039657615,""]
["RL4614",5.184904,0.020133797,"rpoH2"]
["RL2950",4.985766,0.009798433,""]
["RL2307",4.9713793,0.0056749587,""]
["RL2430",4.953679,0.01276258,""]
["RL3456",4.922217,0.010045371,""]
["pRL110584",4.8871927,0.0109676095,""]
["RL1920",4.8821406,0.015267999,""]
["RL3868",4.8552604,0.0065081264,""]
["pRL110257B",4.802972,0.010285868,""]
["RL2718",4.795699,0.023809321,""]
["pRL110006",4.791999,0.024391,""]
["RL1172",4.7841434,0.025765674,""]
["RL2724",4.782263,0.04037424,""]
["RL2720",4.767816,0.040920176,""]
["RL1843",4.760339,0.049210068,""]
["RL3981",4.7577496,0.037280984,""]
["RL3375",4.7346582,0.009088745,""]
["pRL100345",4.7117953,0.009350952,""]
["RL2863",4.704822,0.0036568344,""]
["RL4646",4.679587,0.0186581,""]
["RL2117A",4.664676,0.0216867,""]
["RL1266",4.5858936,0.033744764,""]
["RL3457",4.5340304,0.0047005382,""]
["RL0840",4.518687,0.027089175,""]
["RL2308",4.4718323,0.0006615314,""]
["RL3444",4.4084964,0.004895031,""]
["pRL110304",4.3847623,0.016000653,"treX"]
["RL2211",4.319375,0.031776465,""]
["pRL100071",4.3110633,0.027865564,""]
["RL3374A",4.208786,0.0017643603,""]
["RL0667",4.172535,0.00952199,""]
["pRL100277",4.1322937,0.007550571,""]
["RL0933",4.12512,0.0133198025,""]
["RL3217",4.1090527,0.0017208634,""]
["RL1259",4.073234,0.034330007,""]
["RL2946",4.0424323,0.013924273,""]
["RL1926",4.036259,0.027262691,""]
["RL2876",4.0056825,0.014838388,""]
["RL1909",3.987878,0.0069580865,""]
["RL3437",3.954303,0.035424933,""]
["RL0324",3.9541273,0.0016603069,""]
["pRL110492",3.9376507,0.036619496,""]
["RL2391",3.9356365,0.01564565,""]
["RL1314",3.9244146,0.030616404,""]
["pRL100337",3.8989751,0.04963359,""]
["RL3489",3.8277304,0.03865245,""]
["RL3523",3.8149633,0.028371027,""]
["RL4211",3.7959177,0.02689908,""]
["RL3384",3.7661414,0.0064697317,""]
["RL0467",3.7386367,0.0034104958,""]
["RL1858",3.728333,0.019592592,""]
["RL1389",3.7066674,0.023042519,""]
["RL1455",3.698903,0.0022281962,""]
["RL1035",3.6672604,0.0133348,""]
["pRL100068",3.6455665,0.009814,""]
["RL2602",3.6363149,0.025771735,""]
["RL1034",3.6338584,0.007703522,""]
["RL2725",3.6217208,0.03772098,""]
["RL3046",3.5717998,0.0032691143,""]
["RL2768",3.540362,0.021162651,"ssuC"]
["pRL70167",3.494798,0.00443861,""]
["RL3058",3.485723,0.025716081,""]
["RL4546",3.4243124,0.008735122,""]
["RL0063",3.4230673,0.0071168304,""]
["RL1651",3.4133751,0.03864658,""]
["pRL120445",3.408606,0.03540669,""]
["RL1520",3.40636,0.02816862,""]
["RL3702",3.3943882,0.0030513797,""]
["pRL110603",3.3556514,0.028606258,""]
["RL3160",3.3474426,0.017524475,""]
["RL3449",3.323584,0.03881422,"cspA4"]
["RL4099",3.277808,0.009677224,""]
["RL2716",3.2290094,0.029780999,""]
["RL3751",3.2281399,0.036012836,"pssB"]
["pRL110036",3.2276435,0.0076157846,""]
["RL4046",3.224616,0.012338937,""]
["RL1912",3.210784,0.0051542427,""]
["pRL120340",3.2005012,0.010417699,""]
["pRL90104",3.1746292,0.02704648,""]
["RL4367",3.1683438,0.008146321,"eutP"]
["pRL110322",3.1435585,0.027138334,""]
["RL2264",3.1139364,0.01489041,""]
["RL2721",3.1043994,0.012816398,""]
["RL2969",3.092349,0.0071418653,""]
["RL3042",3.0896294,0.0069162706,"cyoC1"]
["RL3369",3.0791302,0.019443732,""]
["RL2774",3.0641532,0.038273327,""]
["RL2288",3.0573735,0.04678169,"cysG2"]
["RL2839",3.0468404,0.018558742,""]
["RL4267",3.0448632,0.044307586,"acoD"]
["RL1046",3.017482,0.03156762,""]
["RL2431",3.0115578,0.033284508,""]
["RL3076",3.0114512,0.004048719,""]
["RL4205",3.0041075,0.0445578,""]

{"sheet":"phenylalanine DOWN","index":7,"n_rows":59,"n_cols":4,"rows_kept":59,"flags":["formulas_cached_only"]}
["Table S3. viii) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on phenylalanine "]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL1780",0.32614735,0.0033563639,"rpsC"]
["RL3331",0.32549632,0.04245193,"metF"]
["RL1798",0.32512966,0.02675315,"rpoA"]
["RL1789",0.32406163,0.006142602,"rplF"]
["RL0825",0.32287624,0.002381976,"gmd"]
["RL2813",0.32227832,0.014957296,""]
["pRL110375",0.3178426,0.010994575,"ropA3"]
["RL1762",0.31692636,0.022315973,"rplA"]
["RL1777",0.31636196,0.015114598,"rplB"]
["RL1779",0.31617767,0.009417943,"rplV"]
["RL1772",0.31463286,0.0070059127,"tufB2"]
["RL1797",0.30988663,0.026933048,"rpsK"]
["RL2221",0.30751327,0.012804306,"rpsB"]
["pRL120786",0.3057678,0.029898893,""]
["RL1775",0.30461147,0.024639068,"rplD"]
["RL1672",0.30297124,0.004471831,"rpsI"]
["RL1792",0.30236354,0.00640348,"rpmD"]
["RL2243",0.3009395,0.03756648,"pdhC"]
["RL3942",0.29913613,0.026821122,""]
["RL4549",0.29753515,6.261021e-14,""]
["RL0928",0.29513723,0.0020322697,"atpF"]
["RL1559",0.29230702,0.011676353,"acpP"]
["RL2828",0.286687,0.01568762,""]
["RL4134",0.28479588,0.012208884,"pntB1"]
["RL3339",0.2844739,0.048728798,""]
["RL1763",0.27507436,0.014949636,""]
["RL4407",0.2727277,0.021545144,"atpD"]
["RL1773",0.2684342,0.025236627,"rpsJ"]
["RL4260",0.26356328,0.017986052,"nrdI"]
["RL1764",0.2562618,0.042511936,"rplJ"]
["RL0824",0.25407875,0.012981216,""]
["RL1781",0.25178346,0.01418379,"rplP"]
["RL4261",0.25058368,0.038192563,"nrdH"]
["RL3462",0.24884513,0.025288988,""]
["RL1765",0.24705207,0.0141404765,"rplL"]
["RL1774",0.23574674,0.0036693984,"rplC"]
["RL3540",0.23387757,0.032898247,"braC3"]
["RL0389",0.23120658,0.0305122,"metK"]
["RL4521",0.23032266,0.045029357,""]
["RL1554",0.22474103,0.002774023,"rpsR"]
["RL3895",0.22225252,0.014787767,""]
["RL0926",0.2188079,0.019377405,"atpE"]
["RL4258",0.21120015,0.0010359605,"nrdF"]
["RL1945",0.19904697,0.034613416,""]
["RL4065",0.19228202,0.039193176,""]
["RL3617",0.19212677,0.0059319753,""]
["RL3205",0.18642674,0.015440513,"ilvC"]
["RL0388",0.17329742,0.042790875,""]
["RL0884",0.16285527,0.011364747,"groSch1"]
["RL2686",0.14793497,0.03546715,"aroG"]
["RL1691",0.14561331,0.039046638,"hupA1"]
["RL0883",0.14146118,0.024792647,"groLch1"]
["RL0031",0.11492892,0.018705988,""]
["RL1946",0.099643506,0.0031045708,""]

{"sheet":"proline UP","index":8,"n_rows":64,"n_cols":4,"rows_kept":64,"flags":["formulas_cached_only"]}
["Table S3. ix) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on proline"]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["pRL120637",29.316689,0.0054671625,""]
["pRL120553",15.60617,0.004553769,""]
["RL4564",12.64596,0.047375992,"amtB"]
["RL4565",11.909372,0.024035612,"glnK"]
["RL1911",9.250634,0.01667223,""]
["RL3741",8.864578,0.02709725,""]
["RL3549",7.4146447,0.0076744794,"glnII"]
["RL3370",6.684901,0.014453915,""]
["RL0150",6.0572314,0.008547105,""]
["pRL100058",6.019762,0.019744504,""]
["RL0970",5.965087,0.011851232,""]
["pRL120759",5.9005504,0.025263472,""]
["pRL110531",5.562875,0.010997061,""]
["pRL120080",5.510655,0.002109926,""]
["pRL120078",5.155872,0.0058039376,""]
["pRL120669",5.0966,0.0022815776,""]
["RL2393",5.000915,0.014349155,"glnB"]
["RL1279",4.9752603,0.03830787,""]
["pRL100138",4.701078,0.033120535,""]
["pRL90159",4.6411734,0.024484852,""]
["pRL120787",4.580827,0.021974528,""]
["RL1912",4.512957,0.010258219,""]
["RL1925",4.4372716,0.024275541,""]
["pRL90139",4.3898907,0.02262824,""]
["RL1992",4.2817907,0.020299044,"narK"]
["RL1107",4.191142,0.030056799,""]
["RL2940",4.1748495,0.0050873854,""]
["pRL110295",4.1615663,0.0024437925,"hyfE"]
["RL3671",4.035082,0.004052851,""]
["RL0358",3.9721632,0.016158517,""]
["pRL110302",3.9719903,0.0049109966,""]
["pRL110532",3.9491792,0.0030740802,""]
["RL4486",3.947735,0.012707004,""]
["RL4178",3.9357543,0.023564778,""]
["pRL100071",3.8319595,0.0024208063,""]
["RL3196",3.7928884,0.024374386,""]
["pRL110575",3.7818491,0.0057099727,""]
["RL4199",3.708801,0.009990446,""]
["pRL120079",3.6189134,0.041702043,""]
["pRL100249",3.5480213,0.028003657,"gtsB"]
["pRL120636",3.5011487,0.019068683,""]
["pRL120633",3.4938095,0.048631165,""]
["pRL90015",3.484899,0.04074802,"fixG2"]
["RL3908",3.4651692,0.016843673,""]
["RL3165",3.455384,0.034940735,""]
["pRL100072",3.4372642,0.0032813023,""]
["RL1918",3.3702395,0.028244505,""]
["pRL110248",3.3595448,0.02013856,""]
["pRL80072",3.2643507,0.028610166,""]
["pRL100067",3.2501109,0.0051782415,""]
["RL3742",3.2198992,0.005936675,""]
["pRL120195",3.1834464,0.049503844,""]
["pRL100358",3.173516,0.012412721,""]
["RL1188",3.1625366,0.025375612,""]
["RL3793",3.108869,0.049369212,""]
["pRL90151",3.1004758,0.047254957,""]
["pRL100065",3.0419178,0.0050407965,""]
["pRL90087",3.0302715,0.027892401,""]
["RL3017",3.0182576,0.0024688984,""]

{"sheet":"proline DOWN","index":9,"n_rows":30,"n_cols":4,"rows_kept":30,"flags":["formulas_cached_only"]}
["Table S3. x) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on proline"]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL4668",0.32159728,0.009652658,""]
["pRL90113",0.32024467,0.027836084,""]
["RL0194",0.31907207,0.028882649,""]
["pRL100329",0.31449234,0.01523888,""]
["RL4709",0.30747235,0.017826619,""]
["pRL120728",0.30554065,0.032197274,""]
["RL0099",0.29245725,0.03278201,""]
["pRL120644",0.28716516,0.037966948,""]
["RL2364",0.28642482,0.049632702,""]
["RL0031",0.28471872,0.003944799,""]
["pRL120477",0.28296328,0.032134086,""]
["RL2457",0.2780671,0.0016116919,""]
["pRL90193",0.26544163,0.035991922,""]
["RL0852",0.26143613,0.02767234,""]
["RL4659",0.25272202,0.011958578,""]
["RL0098",0.24307738,0.008696678,""]
["pRL80056",0.23758827,0.020492734,""]
["pRL120295",0.2360255,0.00848547,""]
["RL3194",0.23400815,0.006342607,""]
["pRL100240",0.2100468,0.04737648,""]
["RL2443",0.20998241,0.03835717,""]
["RL0313",0.19346474,0.028939266,""]
["pRL110518",0.17732738,0.004477967,"flaE"]
["RL0632",0.111183554,0.00080950535,"araA"]
["RL0989",0.072407365,0.035546802,"matR"]

{"sheet":"N-limited UP","index":10,"n_rows":197,"n_cols":4,"rows_kept":197,"flags":["formulas_cached_only"]}
["Table S3. xi) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown under nitrogen limitation"]
["(1mM NH4+ compared to 10mM NH4+ grown cells (E-MEXP-2857))"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL3741",148.67467,0.0050071897,""]
["RL1966",60.999756,0.009817288,"aldA"]
["RL3740",52.44101,0.02096028,""]
["RL3737",48.059673,0.037155133,""]
["RL3370",44.95221,0.009881266,""]
["RL3172",38.858624,0.014949087,""]
["RL1507",38.645466,0.008891241,""]
["pRL100344",36.42718,0.018311502,""]
["RL3666",32.641647,0.027063144,""]
["RL0228",31.038462,0.0009386768,""]
["RL1911",24.546679,0.0021354728,""]
["RL2756",23.222614,0.008680970999999999,""]
["RL4527",18.373545,0.031055301,""]
["RL4564",18.088657,0.015553532,"amtB"]
["RL1450",17.608974,0.04544846,""]
["RL4565",16.312141,0.0025999239,"glnK"]
["pRL100345",15.097088,0.01269208,""]
["pRL100333",14.290317,0.013357381,""]
["RL3738",13.81158,0.021054985,""]
["pRL120637",13.651962,0.023207968,""]
["pRL100337",13.531428,0.010137388,""]
["pRL110311",12.913103,0.021979408,""]
["RL3684",12.749842,0.00739014,""]
["RL2029",12.6116295,0.0066563785,""]
["pRL100360",12.534948,0.0012041362,""]
["pRL120434",11.613888,0.048558034,""]
["RL1994",11.470153,0.013418492,"nasT"]
["RL3256",11.089635,0.0065142033,"thyA"]
["RL3374",10.837164,0.00067079725,""]
["pRL100346",10.83089,0.014954648,""]
["RL3297",10.589521,0.045811925,"lpxC"]
["RL4367",10.38199,0.037631225,"eutP"]
["RL3723",10.196725,0.025137976,""]
["pRL100334",9.6404505,0.02441263,""]
["RL4366",9.543355,0.021326419,"eutC"]
["RL1990",9.440534,0.0033791969,"nirD"]
["RL3424",9.344117,0.0072164736,"dctA"]
["RL0986",9.250453,0.009041178,""]
["pRL120164",9.047351,0.019103795,""]
["RL4689",8.972125,0.012996643,""]
["RL3369",8.778501,0.009345699,""]
["pRL110496",8.597405,0.0036092845,""]
["pRL100339",8.529708,0.040664975,""]
["pRL100314A",8.390351,0.04118757,""]
["pRL110531",8.298443,0.02069434,""]
["RL2509",8.263647,0.004603288,"citZ"]
["RL2391",8.143738,0.030341128,""]
["pRL110532",8.128852,0.0144938,""]
["RL1918",8.065875,0.03391081,""]
["RL4365",7.956458,0.022694902,"eutB"]
["RL0985",7.6839595,0.00464717,""]
["pRL100072",7.6148086,0.009298583,""]
["pRL100338",7.477541,0.006689316,""]
["pRL90274",7.369,0.025024379,""]
["RL1993",7.3541007,0.007678755,""]
["RL1991",7.263416,0.018601477,"nasD"]
["RL3274",7.186346,0.012368618,"prkA"]
["pRL70006",7.011264,0.027454272,""]
["RL0770",6.767226,0.039052658,""]
["RL1992",6.5573115,0.009572795,"narK"]
["RL1925",6.5360637,0.028765753,""]
["pRL100357",6.5305324,0.0053891297,""]
["RL2203",6.381176,0.014519267,"aapQ"]
["pRL90203",6.269159,0.000696835,""]
["RL1910",6.234422,0.0015297289,""]
["RL1483",6.069645,0.027292935,""]
["RL1390",5.915796,0.009073875,""]
["RL1279",5.6987863,0.016241727,""]
["RL2585",5.6891627,0.00055979675,"nodX"]
["pRL110119",5.6849384,0.020216547,""]
["RL4528",5.645425,0.037901253,""]
["RL4046",5.6100464,0.012011755,""]
["RL0150",5.575581,0.0006151417,""]
["pRL120078",5.4437785,0.0061319014,""]
["RL4690",5.428328,0.0015301,""]
["RL3275",5.3123035,0.030235767,""]
["RL2202",5.307302,0.030833686,"aapM"]
["pRL100335",5.2661686,0.020786876,""]
["RL2482",5.224012,0.041338794,""]
["RL3379",5.188972,0.037190717,""]
["RL1089",5.1808887,0.0379338,""]
["RL4455",5.1577606,0.027363637,"speB2"]
["RL0932",5.1334434,0.0028902492,""]
["RL1402",5.110715,0.017256552,""]
["RL3273",5.013153,0.012727012,""]
["pRL90087",4.9902263,0.02312372,""]
["pRL100336",4.9763293,0.035266716,"atzB"]
["RL2257",4.9716806,0.012264369,"ntrC"]
["RL4099",4.9250016,0.01576479,""]
["pRL110422",4.918415,0.0436853,""]
["RL2013",4.8832397,0.0051772785,""]
["RL4098",4.7550507,0.0060082455,""]
["pRL110485",4.746579,0.026051879,""]
["pRL120079",4.725671,0.008013082,""]
["pRL110486",4.71723,0.0031536818,""]
["RL1035",4.694419,0.00810195,""]
["pRL70167",4.650951,0.048807763,""]
["RL3523",4.6101637,0.007341132,""]
["pRL120305",4.570748,0.0002873183,""]
["pRL110616",4.559631,0.014369519,"nadB"]
["RL1046",4.47597,0.01342994,""]
["RL0506",4.4243526,0.004535806,""]
["pRL120306",4.4238243,0.0007960445,""]
["pRL120432",4.3890085,0.0036805233,""]
["RL0987",4.375962,0.022734094,""]
["RL3809",4.3541794,0.0287157,""]
["RL3701",4.3241215,0.01821599,""]
["pRL110448",4.2920275,0.03764935,""]
["RL3563",4.2849355,0.047853578,""]
["pRL110465",4.2621007,0.026940843,""]
["pRL110350",4.2431703,0.0030830249,""]
["RL2119",4.219248,0.03465703,""]
["RL3736",4.2123218,0.027907986,"ureD"]
["pRL110605",4.1709924,0.0019908536,""]
["RL3316",4.122775,0.009215611,"mraZ"]
["pRL120080",4.110008,0.034039732,""]
["pRL110268",4.109455,0.01644858,""]
["RL4534",4.078214,0.012189645,""]
["RL3639",4.0360622,0.00915602,""]
["RL3670",4.0076146,0.008189278,""]
["RL3368",4.0027237,0.0420444,""]
["pRL70027",3.9536135,0.012886856,""]
["pRL120724",3.944173,0.04709333,""]
["RL4092",3.9184337,0.04618759,""]
["RL2019",3.9126308,0.0074707856,""]
["pRL100359",3.8989463,0.018258298,""]
["RL3272",3.8394575,0.006809969,""]
["pRL90018",3.8219407,0.00407347,"fixN2"]
["pRL100358",3.812988,0.008285966,""]
["RL3154",3.7923844,0.020117376,""]
["RL4311",3.753797,0.009015568,""]
["RL3533",3.7439857,0.01538255,"qatX1"]
["RL2508",3.7224972,0.019335998,"gltA2"]
["RL2192",3.7123764,0.027743915,""]
["RL1860",3.7106602,0.044775147,"phhA"]
["pRL100322",3.7044194,0.009175658,""]
["pRL120561",3.687528,0.013343156,""]
["RL4607",3.6790564,0.00011176496,""]
["pRL110488",3.65999,0.047846537,""]
["pRL120433",3.6279013,0.017648445,""]
["RL2042",3.6058538,0.0070229745,""]
["RL0727",3.5992281,0.01151452,"rem"]
["RL1389",3.568776,0.0467254,""]
["RL2383",3.5581868,0.013685775,""]
["RL3457",3.551336,0.03502652,""]
["RL0860",3.5486262,0.009162174,""]
["RL0577",3.5385876,0.043523088,""]
["pRL100166",3.525877,0.017860984,""]
["pRL110292",3.5007744,0.026675582,"hycG"]
["pRL70029",3.4896574,0.009005179,""]
["RL3573A",3.4755366,0.04321975,""]
["RL2148",3.4750257,0.002701938,""]
["RL1455",3.472834,0.035471395,""]
["RL0227",3.4467957,0.0048191543,""]
["RL0462",3.435431,0.0077580516,""]
["pRL110220",3.3830335,0.022325307,""]
["RL1034",3.3729827,0.0065859286,""]
["pRL110238",3.3406484,0.024150603,""]
["pRL110252",3.3305805,0.013408791,""]
["RL4532",3.323583,0.03688349,""]
["pRL110615",3.2968495,0.0013973155,"nadC"]
["RL2307",3.2838624,0.009327776,""]
["RL3867",3.279998,0.004526834,""]
["RL0224",3.2674513,0.020775331,""]
["pRL110046",3.2527742,0.020308556,""]
["pRL100126A",3.2323542,0.03863284,""]
["RL0676",3.2229614,0.0018848908,""]
["RL3192",3.2222998,0.034812674,""]
["RL2098",3.2212636,0.042518128,""]
["RL1694",3.208094,0.04224793,""]
["pRL110384",3.204401,0.013665279,""]
["RL4163",3.2031035,0.0049346955,""]
["pRL70075",3.1886804,0.048112642,""]
["RL0610",3.1743097,0.03944908,""]
["pRL110016",3.1740055,0.016855597,""]
["RL0933",3.1643515,0.01870008,""]
["RL4211",3.1496654,0.012192287,""]
["RL0505",3.1465392,0.0047124866,"fadD"]
["RL2149",3.1295516,0.036820352,""]
["pRL100340",3.100206,0.029992733,""]
["RL0096",3.0942059,0.001973072,""]
["RL1009",3.0850008,0.036222838,""]
["pRL100071",3.0837493,0.024525775,""]
["RL1218",3.0734746,0.019300135,""]
["RL2235",3.0550213,0.0050399,""]
["RL3549",3.0540528,0.04605598,"glnII"]
["pRL90069",3.046228,0.040388912,""]
["pRL120310",3.0427246,0.029691748,""]
["RL4109",3.040974,0.009552859,""]
["RL0667",3.0290382,0.027096024,""]
["RL0901",3.0124147,0.02557232,""]
["pRL70044",3.0042598,0.017850976,""]

{"sheet":"N-limited DOWN","index":11,"n_rows":298,"n_cols":4,"rows_kept":298,"flags":["formulas_cached_only"]}
["Table S3. xii) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown under nitrogen limitation"]
["(1mM NH4+ compared to 10mM NH4+ grown cells (E-MEXP-2857))"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL4240",0.3292632,0.016438443,""]
["RL0493",0.32841986,0.022693908,"pyrC"]
["RL2844",0.32653406,0.04082635,""]
["RL1637",0.32527146,0.027581872,""]
["RL1698",0.3246851,0.011031004,""]
["RL3402",0.32458282,0.021811007,"rpoD"]
["pRL120200",0.3240139,0.049358074,"eryG"]
["RL0246",0.32157648,0.00034521875,"ddhA"]
["pRL120659",0.32127082,0.04551286,""]
["RL2955",0.32116812,0.009420481,""]
["pRL100130",0.3197726,0.041304134,""]
["pRL120278",0.31923142,0.027263146,""]
["RL3254",0.31857228,0.0026271222,"hflK"]
["RL0554",0.31831598,0.018775648,"metZ"]
["RL2049",0.31825146,0.029664295,"serS"]
["RL1049",0.31751415,0.0036387346,""]
["RL0490",0.31729054,0.030693008,""]
["pRL120092",0.31719875,0.010199816,""]
["pRL90321",0.3164947,0.002340166,"cspAp9"]
["RL3480",0.3160703,0.039084423,""]
["RL0254",0.3154699,0.007093803,"lepA"]
["RL2082",0.3137442,0.037680663,"gatB"]
["pRL110040",0.31335026,0.0029896833,"cyoCp11"]
["RL2083",0.31233987,0.009544352,""]
["RL0847",0.31231433,0.03506621,"guaB"]
["RL0347",0.3119205,8.895901e-05,"prfC"]
["RL0899",0.31119263,0.004060214,""]
["RL4707",0.30967137,0.047375288,"leuB"]
["RL1439",0.30933613,0.044575606,"cycL"]
["RL1083",0.3086048,0.04053938,""]
["RL0461",0.30854565,0.014260433,""]
["RL1007",0.30822405,0.030072792,"aroC"]
["RL1945",0.30674353,0.029527603,""]
["RL3553",0.30655542,0.0073168143,""]
["RL4282",0.306426,0.019072764,"prfA"]
["RL3124",0.30589586,0.016322995,""]
["RL3481",0.303509,0.048357222,""]
["pRL120762",0.30272275,0.04268785,""]
["RL2163",0.30234522,0.004656301,""]
["RL3464",0.30122438,0.012940441,""]
["RL1300",0.300671,0.028414227,"rpsU1"]
["RL4320",0.3006053,0.017142134,"etfA1"]
["RL0802",0.2988649,0.0064911568,""]
["RL2097",0.2969505,0.0014733104,"hom1"]
["RL2604",0.29598543,0.00346907,""]
["RL4323",0.29515216,0.006542811,"argH"]
["RL3411",0.2945193,0.004635358,"carA"]
["pRL100258",0.29278857,0.007722369,""]
["RL2728",0.29178008,0.026939353,""]
["RL1348",0.29109496,0.0327689,"gstA4"]
["RL0943",0.291038,0.030864589,"glyQ"]
["RL0810A",0.29093644,8.986272e-05,""]
["RL2758",0.2884676,0.013108987,""]
["RL3432",0.28792885,0.019752972,""]
["RL2750",0.28737715,0.030238077,""]
["RL2378",0.2873669,0.02219742,""]
["RL3792",0.2868925,0.025533136,""]
["RL3448",0.2867922,0.048624117,""]
["pRL100099",0.2825247,0.018534977,""]
["RL4519",0.2812612,0.03979443,""]
["pRL120526",0.2810782,0.014320989,"gfA"]
["RL3302",0.280768,0.040354714,"aqpZ"]
["RL2721",0.28060678,0.036401317,""]
["RL1697",0.28024313,0.011307462,""]
["RL4584",0.2799687,0.010012612,"fbpA"]
["pRL100135",0.27941892,0.014867594,""]
["RL0825",0.27903852,0.023696318,"gmd"]
["RL2579",0.27901414,0.0447697,"sufD"]
["pRL110060",0.27890894,0.041327633,""]
["RL4337",0.2779765,0.013969292,"tyrC"]
["pRL90049",0.27737483,0.009578222,""]
["RL3884",0.2765315,0.011036767,"sitA"]
["RL3677",0.275715,0.045787483,"lspL"]
["RL1948",0.2747126,0.0022216649,"gpt"]
["RL3469",0.2746358,0.012403359,""]
["RL3513",0.2734124,0.024582913,"leuA1"]
["RL2820",0.2731883,0.0487205,""]
["RL2404",0.27258265,0.022020979,""]
["RL2781",0.27066618,0.011044119,"cobU"]
["pRL110009",0.269351,0.020310914,"hmrR1"]
["RL4628",0.2690584,0.025129179,"ispA"]
["RL0595",0.2685985,0.0028318176,"cspA1"]
["pRL100395",0.26856095,0.027840633,""]
["pRL110075",0.26330635,0.043373287,""]
["RL1787",0.26211956,0.035826113,"rpsN"]
["pRL120087",0.2607461,0.004966444,""]
["RL0826",0.26065746,0.03741478,"fcl"]
["RL1064",0.25899848,0.04092528,""]
["RL3439",0.258269,0.0356154,"lpcB"]
["RL1318",0.25702697,0.03134036,"mcpM"]
["RL1759",0.25695008,0.030537747,"secE"]
["RL3339",0.25690776,0.044835158,""]
["RL2376",0.25681436,0.02176015,""]
["RL0156",0.25645742,0.00064011465,""]
["RL4732",0.25580555,0.0024429,"leuS"]
["RL2815",0.25245515,0.0064553963,"fabF2"]
["RL4025",0.25183183,0.038961653,"suhB"]
["RL4358",0.25066712,0.029323962,""]
["RL1634",0.2505137,0.0003280638,"hppA"]
["RL4250",0.25024113,0.024757316,""]
["RL2377",0.24987718,0.0028231724,""]
["RL0055",0.24977979,0.016238961,""]
["RL4007",0.24967936,5.760225e-14,"gap"]
["RL4073",0.24951549,0.038654093,"hss"]
["RL0157",0.24949756,0.00085230486,""]
["RL2239",0.24915256,0.007580171,"eno"]
["pRL120086",0.2483805,0.00040250664,""]
["RL0127",0.24833761,0.04545833,"nusA"]
["RL2621",0.24792565,0.011461379,""]
["RL2567",0.24759527,0.025909012,"rLuC"]
["pRL110413",0.2469677,0.018034657,"rhaS"]
["RL4520",0.24556376,0.027787311,""]
["RL0430",0.24392237,0.0107084485,"def1"]
["RL2631",0.24350071,0.011449449,"icd"]
["RL0340",0.24307683,0.018476423,"cysK"]
["RL2161",0.24285284,0.021024931,""]
["RL4086",0.24245971,0.007922942,"ltaE"]
["RL3862",0.24057819,0.04276722,""]
["RL2407",0.23830411,0.014811568,"tgt"]
["RL2472",0.23686181,0.0026669258,""]
["RL4298",0.2367032,0.033217322,"secA"]
["RL3554",0.23648453,0.00036425848,""]
["RL0877",0.23627248,0.014233303,""]
["RL4438",0.23559932,0.0006147491,"sucC"]
["RL3419",0.23550032,0.034199446,"carB"]
["RL0889",0.23541453,0.015034158,"ileS"]
["RL1062",0.23315683,0.042086326,"thrC"]
["pRL100211A",0.23229319,0.006796975,""]
["RL0516",0.22963852,0.022335235,""]
["RL0504",0.22879547,0.03717607,"pgi"]
["RL1739",0.2287225,0.028362919,"pyrB"]
["RL1050",0.22844484,0.044403426,""]
["pRL120367",0.22706094,0.0029797317,""]
["RL2512",0.22528304,0.00043368907,"secG"]
["pRL100098",0.2252077,0.045782022,""]
["RL2062",0.22480501,0.007941883,"tig"]
["RL0855",0.22238854,0.00866027,""]
["RL0924",0.22029306,0.009402188,"atpI"]
["pRL100410",0.22004327,0.0020471136,""]
["RL3912",0.21975544,0.025764026,""]
["RL4130",0.21908347,0.007497099,"rpsU2"]
["RL3153",0.21834633,0.039468013,"ribH2"]
["RL0795",0.21787924,0.026176097,""]
["pRL120558",0.2167982,0.017173493,""]
["RL0617",0.21662204,0.0065065175,""]
["RL0489",0.21380365,0.032297436,""]
["RL1340",0.21236879,0.021990873,"sodB"]
["RL0445",0.21192247,0.034028117,"argB"]
["RL0109",0.20991486,0.0040817293,""]
["RL3483",0.20976317,0.032946263,"apt"]
["RL3303",0.20896392,0.0065207756,""]
["RL3486",0.20611161,0.014655971,"petA"]
["RL4319",0.20368811,0.020963214,"etfB1"]
["RL4249",0.20309536,0.03436765,""]
["RL4136",0.20206337,0.023063602,"pntAA"]
["pRL90302",0.20146574,0.04877631,""]
["pRL120007",0.20017333,0.008249509,""]
["RL0921",0.19921863,0.02015989,""]
["RL0922",0.19819738,0.020664467,"kup1"]
["RL1788",0.19793397,0.015480648,"rpsH"]
["RL2566",0.19748357,0.022030082,""]
["RL0517",0.19695619,0.019140547,""]
["RL1794",0.196791,0.029149227,"secY"]
["pRL120556",0.19541886,0.008942194,""]
["RL2594",0.19245107,0.02115636,"deaD"]
["RL3961",0.19188312,0.025822923,"serC"]
["RL2698",0.19106628,0.018108942,"rpiA"]
["RL4722",0.19048052,0.0030254824,"purH"]
["RL2121",0.18794678,0.021447347,""]
["RL4740",0.18773428,0.042531397,"rho"]
["RL1795",0.1871277,0.022593023,"adk1"]
["RL0852",0.18437883,0.040281475,""]
["RL0542",0.18405424,0.017358912,""]
["RL0453",0.18380998,0.013670643,"oxaA"]
["pRL100451",0.1831807,0.016215432,"rapA2"]
["RL2697",0.17917895,0.008069843,""]
["RL1767",0.17864586,0.03475392,"rpoC"]
["RL0120",0.17816286,0.00026601704,"pnp"]
["RL4011",0.17756015,0.022844652,"pgk"]
["RL4437",0.17665707,0.039142415,""]
["RL0518",0.1759447,0.020663977,""]
["RL0444",0.17558762,0.008845562,"lldD3"]
["RL0006",0.17539126,0.021469465,"secB"]
["RL1556",0.17262404,0.04992202,""]
["RL2814",0.17124176,0.0037334834,"fabF1"]
["RL0927",0.1702083,0.008594481,"atpG2"]
["RL2790",0.1698347,0.018366897,""]
["RL4600",0.16916509,0.02564011,"efp"]
["RL4572",0.16909881,0.00809796,""]
["RL4065",0.16642976,0.03716229,""]
["RL3363",0.15985368,0.005417232,""]
["RL1260",0.15801145,0.018037818,"cysN"]
["RL4184",0.15336144,0.036321636,"gltX"]
["RL2794",0.15257919,0.04401465,""]
["RL1261",0.15166083,0.02110359,"cysD"]
["pRL120557",0.15085423,0.049233433,""]
["RL1731",0.14885598,0.024745358,"rpmG"]
["RL2222",0.14815813,0.02244487,"tsf"]
["RL4549",0.14738987,1.0635581e-19,""]
["RL0151",0.1470018,0.004712719,"dnaJ"]
["RL2405",0.14657277,0.00026353006,""]
["RL4439",0.14574514,4.875987e-13,"mdh"]
["RL4436",0.14530906,0.030978432,"sucD"]
["RL2613",0.14280196,0.023659147,""]
["RL0152",0.14260466,1.0426834e-14,"dnaK"]
["RL3540",0.14245842,0.034060158,"braC3"]
["RL0269",0.14222701,0.019981328,"pheS"]
["RL0388",0.14098166,0.04841642,""]
["RL4103",0.14078091,0.014820406,""]
["RL0925",0.14007576,0.006887313,"atpB"]
["RL3891",0.14004256,0.025784561,""]
["RL2035",0.13960862,0.00028807635,"valS"]
["RL4248",0.13685304,0.039468553,"lacZ"]
["RL0926",0.13557062,0.004223855,"atpE"]
["RL0616",0.13503109,0.0053267796,"infA"]
["RL2054",0.13423894,0.017815558,"yajC"]
["RL1557",0.13079773,0.02846278,"fabD"]
["RL3890",0.12964344,0.025263958,""]
["RL1784",0.12926573,0.022579374,"rplN"]
["RL1099",0.12906808,0.028495785,"hsdMch1"]
["RL1797",0.12688191,0.036744196,"rpsK"]
["pRL110457",0.12683812,0.009071926,""]
["RL0376",0.12544309,0.0015665205,""]
["pRL110374",0.12296589,0.03270305,""]
["RL0121",0.12265107,0.0014243567,"rpsO"]
["RL3960",0.115089744,0.034860194,""]
["RL4405",0.114840254,0.0010696352,"atpC"]
["RL4624",0.114197806,0.041994955,"rpmF"]
["RL4134",0.11397735,0.031814467,"pntB1"]
["RL3468",0.11377318,0.00019510029,"prs"]
["RL3205",0.113241784,0.034564927,"ilvC"]
["pRL100404",0.11131007,0.005138935,"mctP"]
["RL3504",0.1111997,0.0012132598,""]
["RL0106",0.106244475,2.0536961e-19,"rpsA"]
["RL4252",0.10585363,0.01209883,""]
["RL4176",0.102593556,0.038272843,"xylA"]
["RL1691",0.102501996,0.0012604407,"hupA1"]
["RL2624",0.09630064,0.040537875,"rpsD"]
["RL1772",0.09591635,0.024553725,"tufB2"]
["RL1789",0.094913736,0.0012630656,"rplF"]
["RL1791",0.09270405,0.00829472,"rpsE"]
["pRL100259",0.09181258,0.03340724,""]
["RL1769",0.09107205,0.018170675,"rpsL"]
["RL2686",0.08926047,0.040980246,"aroG"]
["RL3471",0.088598765,0.032255597,""]
["RL0128",0.083632104,0.009402811,""]
["RL1771",0.0814971,0.011863677,"fus"]
["RL4407",0.07922621,0.020545144,"atpD"]
["pRL90080",0.078797236,0.006894224,""]
["RL4017",0.07828214,0.013976251,"rpmE"]
["RL1796",0.076006874,0.013917862,"rpsM"]
["RL1757",0.07384181,0.022585215,"tufB1"]
["RL1605",0.07344719,0.025902467,"aspS"]
["RL1672",0.072772935,0.012271833,"rpsI"]
["pRL90303",0.07183258,0.018746251,""]
["RL0267",0.07124423,4.7771343e-18,"rpmI"]
["RL2221",0.06856658,0.03250203,"rpsB"]
["RL1786",0.066902906,0.031061942,"rplE"]
["RL1552",0.06542109,0.03651649,"rplI"]
["RL0883",0.064026885,0.00080919196,"groLch1"]
["RL4715",0.06211614,0.0017435986,"asd"]
["RL1777",0.061691374,0.04841821,"rplB"]
["RL1580",0.06137304,0.005775761,"ndk"]
["RL4521",0.06090406,0.034130476,""]
["RL0884",0.06078454,0.0032986375,"groSch1"]
["RL1798",0.06033871,0.011761112,"rpoA"]
["RL4552",0.059313294,0.020810938,""]
["RL1779",0.05905963,0.01926924,"rplV"]
["RL2791",0.05801238,0.010338816,""]
["RL3624",0.05796937,0.046432998,""]
["RL3617",0.055615056,0.022483371,""]
["RL1773",0.05530629,0.0069255396,"rpsJ"]
["pRL100405",0.055195954,0.00053450605,""]
["RL1762",0.053219225,0.017313696,"rplA"]
["RL1792",0.053014234,0.01948525,"rpmD"]
["RL1764",0.049520656,0.0033720902,"rplJ"]
["RL1776",0.047750786,0.016076636,"rplW"]
["RL1761",0.04756501,0.009405172,"rplK"]
["RL1765",0.04695537,0.018926466,"rplL"]
["RL1780",0.046565216,0.00011726586,"rpsC"]
["RL1775",0.04617039,0.015745305,"rplD"]
["RL1782",0.045256093,0.00043053404,"rpmC"]
["RL1763",0.04487052,0.0008391409,""]
["RL1774",0.044000197,0.03035699,"rplC"]
["RL1554",0.04350052,0.016746474,"rpsR"]
["RL1799",0.042232648,0.009690189,"rplQ"]
["RL1778",0.041929793,0.02287203,"rpsS"]
["RL1785",0.040685616,0.0012961747,"rplX"]
["RL0031",0.036212694,0.028789017,""]
["RL1781",0.035146613,0.0034941044,"rplP"]
["RL1555",0.035012927,0.0026041064,"rpsF"]
["RL1783",0.03392618,0.018063733,"rpsQ"]
["RL1770",0.031341925,0.011165778,"rpsG"]

{"sheet":"L-arabinose UP","index":12,"n_rows":37,"n_cols":4,"rows_kept":37,"flags":["formulas_cached_only"]}
["Table S3. xiii) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on arabinose"]
["compared to glucose/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL0037",28.016188,4.3409498e-05,"pckA"]
["RL3172",7.635614,0.020812545,""]
["RL4012",6.045869,0.014884271,""]
["RL3960",4.932199,0.004343014,""]
["RL3613",4.7292495,0.025230533,""]
["pRL120752",4.483314,0.046628352,""]
["pRL110191",4.417081,0.008360221,""]
["RL3612",4.184298,0.0024394947,"ilvD2"]
["RL3616",3.9135523,0.015133603,""]
["RL3961",3.854595,0.0074544093,"serC"]
["RL2378",3.849869,0.011524828,""]
["RL3025",3.8126957,0.028846685,""]
["RL2878",3.7129862,0.013334312,""]
["pRL120097",3.6614769,0.0056489897,""]
["pRL120602",3.6392894,0.019116787,""]
["RL3424",3.6124346,0.006451176,"dctA"]
["pRL100334",3.5830238,0.01896197,""]
["RL2377",3.5656154,0.007956744,""]
["RL3614",3.5615458,0.005162743,""]
["RL2296",3.5139396,0.03294334,"aldH"]
["pRL100416",3.4819193,0.006536378,""]
["pRL110579",3.4635565,0.022503376,""]
["RL3615",3.4399722,0.0019966115,""]
["RL1682",3.436225,0.018999003,""]
["RL4433",3.4283433,0.017745804,"sucB"]
["pRL120475",3.3743854,0.017626511,"impA"]
["RL1877",3.3360481,0.0318612,""]
["RL4437",3.2495933,0.01339564,""]
["pRL100388",3.1984367,0.0371875,""]
["RL3115",3.1962447,0.0039623943,""]
["pRL90150",3.0822897,0.006757332,""]
["pRL100422",3.0389435,0.0036676568,""]

{"sheet":"L-arabinose DOWN","index":13,"n_rows":37,"n_cols":4,"rows_kept":37,"flags":["formulas_cached_only"]}
["Table S3. xiv) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on arabinose"]
["compared to glucose/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["pRL120177",0.3229241,0.048830174,"pauA"]
["RL3703",0.3226949,0.01463365,"rpoZ"]
["RL3623",0.32252157,0.032069013,""]
["RL4471",0.3158012,0.045470733,"aspC"]
["RL0901",0.31036738,0.017349197,""]
["pRL110238",0.30536693,0.017801631,""]
["RL2231",0.29962426,0.006861395,"lpxA"]
["RL2243",0.29944253,0.012628948,"pdhC"]
["RL4614",0.29133618,0.012897203,"rpoH2"]
["RL1121",0.29022777,0.04984383,""]
["pRL110183",0.28262198,0.0068532065,""]
["pRL100062",0.24681896,0.011470344,""]
["RL3626",0.24428079,0.014092784,""]
["pRL100428",0.24333899,0.0012110454,""]
["RL3192",0.24111293,0.030356579,""]
["pRL110222",0.23370422,0.042798355,""]
["RL1135",0.22642392,0.040986594,""]
["RL4654",0.20871322,0.03351271,"intB"]
["pRL110058",0.20822561,0.005843779,""]
["RL3256",0.19090779,0.019584863,"thyA"]
["pRL120791",0.16447541,0.0013378904,""]
["RL2588",0.15162309,0.020183802,"tyrS1"]
["RL2718",0.15118143,0.014382089,""]
["RL2720",0.14550824,0.017274532,""]
["RL3625",0.1442897,0.01489029,""]
["RL1875",0.13338499,0.03788932,""]
["RL4252",0.11705269,0.0036325,""]
["RL1946",0.10264427,0.006417177,""]
["RL2722",0.101630576,0.025788713,""]
["RL2723",0.10148646,0.022500603,""]
["RL3624",0.08256051,0.004845338,""]
["RL2721",0.07530316,0.038625386,""]

{"sheet":"galactose UP","index":14,"n_rows":17,"n_cols":4,"rows_kept":17,"flags":["formulas_cached_only"]}
["Table S3. xv) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on galactose"]
["compared to glucose/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL0914",6.31406,0.03910387,""]
["pRL120781",5.958561,0.023509573,""]
["RL3614",4.7149124,0.04743081,""]
["RL1066",4.2908683,0.0006755095,""]
["RL3617",4.136424,0.012272614,""]
["pRL110247",3.9566603,0.01463784,""]
["pRL110246",3.8576427,0.008542428,""]
["RL3616",3.5317307,0.030222302,""]
["RL3615",3.3186352,0.00786148,""]
["RL1135",3.1827514,0.04821733,""]
["pRL110242",3.0994713,0.011201533,""]
["RL1131",3.005694,0.0009911102,""]

{"sheet":"galactose DOWN","index":15,"n_rows":11,"n_cols":4,"rows_kept":11,"flags":["formulas_cached_only"]}
["Table S3. xvi) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on galactose"]
["compared to glucose/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL0522",0.31066385,0.0052683903,""]
["RL3473",0.30654067,0.02808201,""]
["pRL100401",0.26670516,0.024308886,"ntaA1"]
["RL1088",0.2047817,0.0118729975,""]
["RL3625",0.16804887,0.020251274,""]
["RL3624",0.13310346,0.020650856,""]

{"sheet":"arabinogalactan UP","index":16,"n_rows":19,"n_cols":4,"rows_kept":19,"flags":["formulas_cached_only"]}
["Table S3. xvii) Normalised expression of genes from a single microarray up-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on arabinogalactan"]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["RL2721",24.877237,0.020019436,""]
["RL2719",21.08155,0.029997068,""]
["RL2722",17.48812,0.012579124,""]
["RL2720",10.697057,0.0019621698,""]
["RL2723",10.193737,0.024380133,""]
["RL2718",8.12903,0.017893063,""]
["RL4619",5.1500545,0.021808416,""]
["RL1946",4.0941224,0.012214879,""]
["RL4261",3.5979278,0.028167617,"nrdH"]
["RL2724",3.5931513,0.0056114094,""]
["pRL120378",3.3167605,0.012746078,""]
["RL1552",3.1213427,0.011470348,"rplI"]
["RL0505",3.082397,0.027074106,"fadD"]
["RL2019",3.0706818,0.0018438535,""]

{"sheet":"arabinogalactan DOWN","index":17,"n_rows":10,"n_cols":4,"rows_kept":10,"flags":["formulas_cached_only"]}
["Table S3. xviii) Normalised expression of genes from a single microarray down-regulated ≥3-fold, p≤0.05 in Rlv3841 grown on arabinogalactan"]
["compared to pyruvate/NH4+  grown cells (E-MEXP-2857)"]
[]
[]
["Gene_id","Normalized","t_test_P_value","Designation_updated"]
["pRL100077",0.31909207,0.009444288,""]
["RL4086",0.3167472,0.04137745,"ltaE"]
["RL3760",0.28033298,0.03612776,""]
["pRL120596",0.26706517,0.0492402,""]
["pRL120786",0.26645145,0.019712007,""]