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["User file and parameters: User file: nickList.txt, Organism: mmusculus, Id Type: gene_symbol, Ref Set: affy_moex_1_0_st_v1, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2"]
[]
["The results for each enriched KEGG pathway are listed in this table. For each pathway, the first row lists its KEGG pathway"]
["name, and corresponding KEGG ID. The second row lists"]
["number of reference genes in the category (C), number of genes in the gene set and also in the category (O), expected number in the"]
["category (E), Ratio of enrichment (R), p value from hypergeometric test (rawP), and p value adjusted by the multiple test adjustment (adjP)."]
["Finally, genes in the pathway are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID,"]
["Ensembl Gene Stable ID, Gene symbol, and description."]
[]
[]
["KEGG pathway","Circadian rhythm - mammal",4710]
["C=12;O=4;E=0.03;R=130.96;rawP=1.79e-08;adjP=1.25e-07"]
["Nr1d1","NA",217166,"ENSMUSG00000020889","Nr1d1","nuclear receptor subfamily 1, group D, member 1"]
[]
["Arntl","NA",11865,"ENSMUSG00000055116","Arntl","aryl hydrocarbon receptor nuclear translocator-like"]
[]
["Clock","NA",12753,"ENSMUSG00000029238","Clock","circadian locomoter output cycles kaput"]
[]
["Npas2","NA",18143,"ENSMUSG00000026077","Npas2","neuronal PAS domain protein 2"]
[]
[]
["KEGG pathway","Drug metabolism - other enzymes",983]
["C=45;O=4;E=0.11;R=34.92;rawP=5.07e-06;adjP=1.77e-05"]
["Cyp2a4","NA",13086,"ENSMUSG00000074254","Cyp2a4","cytochrome P450, family 2, subfamily a, polypeptide 4"]
[]
["Tymp","NA",72962,"ENSMUSG00000022615","Tymp","thymidine phosphorylase"]
[]
["Cyp2a5","NA",13087,"ENSMUSG00000005547","Cyp2a5","cytochrome P450, family 2, subfamily a, polypeptide 5"]
[]
["Ugt1a1","NA",394436,"ENSMUSG00000054545","Ugt1a1","UDP glucuronosyltransferase 1 family, polypeptide A1"]
[]
[]
["KEGG pathway","Caffeine metabolism",232]
["C=8;O=2;E=0.02;R=98.22;rawP=0.0002;adjP=0.0005"]
["Cyp2a4","NA",13086,"ENSMUSG00000074254","Cyp2a4","cytochrome P450, family 2, subfamily a, polypeptide 4"]
[]
["Cyp2a5","NA",13087,"ENSMUSG00000005547","Cyp2a5","cytochrome P450, family 2, subfamily a, polypeptide 5"]
[]
[]
["KEGG pathway","Retinol metabolism",830]
["C=60;O=3;E=0.15;R=19.64;rawP=0.0005;adjP=0.0009"]
["Cyp2a4","NA",13086,"ENSMUSG00000074254","Cyp2a4","cytochrome P450, family 2, subfamily a, polypeptide 4"]
[]
["Cyp2a5","NA",13087,"ENSMUSG00000005547","Cyp2a5","cytochrome P450, family 2, subfamily a, polypeptide 5"]
[]
["Ugt1a1","NA",394436,"ENSMUSG00000054545","Ugt1a1","UDP glucuronosyltransferase 1 family, polypeptide A1"]
[]
[]
["KEGG pathway","Drug metabolism - cytochrome P450",982]
["C=68;O=3;E=0.17;R=17.33;rawP=0.0007;adjP=0.0010"]
["Cyp2a4","NA",13086,"ENSMUSG00000074254","Cyp2a4","cytochrome P450, family 2, subfamily a, polypeptide 4"]
[]
["Cyp2a5","NA",13087,"ENSMUSG00000005547","Cyp2a5","cytochrome P450, family 2, subfamily a, polypeptide 5"]
[]
["Ugt1a1","NA",394436,"ENSMUSG00000054545","Ugt1a1","UDP glucuronosyltransferase 1 family, polypeptide A1"]
[]
[]
["KEGG pathway","PPAR signaling pathway",3320]
["C=71;O=2;E=0.18;R=11.07;rawP=0.0141;adjP=0.0164"]
["Cpt1a","NA",12894,"ENSMUSG00000024900","Cpt1a","carnitine palmitoyltransferase 1a, liver"]
[]
["Ppard","NA",19015,"ENSMUSG00000002250","Ppard","peroxisome proliferator activator receptor delta"]
[]
[]
["KEGG pathway","Metabolic pathways",1100]
["C=1014;O=4;E=2.58;R=1.55;rawP=0.2570;adjP=0.2570"]
["Cyp2a4","NA",13086,"ENSMUSG00000074254","Cyp2a4","cytochrome P450, family 2, subfamily a, polypeptide 4"]
[]
["Tymp","NA",72962,"ENSMUSG00000022615","Tymp","thymidine phosphorylase"]
[]
["Cyp2a5","NA",13087,"ENSMUSG00000005547","Cyp2a5","cytochrome P450, family 2, subfamily a, polypeptide 5"]
[]
["Ugt1a1","NA",394436,"ENSMUSG00000054545","Ugt1a1","UDP glucuronosyltransferase 1 family, polypeptide A1"]