Chr Strand Start End Aligned to GeneName AnnotationSource ClusterID ClusterSequence ReadCount ConversionLocationCount ConversionEventCount NonConversionEventCount T2Cfraction ConversionSpecificity endG_fraction RedundantSeqFraction RedundantCopyFraction UniqueReads None Other_1 T2C_1 Link RRE UUAUUUAUU UAUUUAU AUUUA UAUU RRE chr1 - 21070796 21070818 3'utr HP1BP3 Ensembl G1000.1 TAATAATTAATCTTATTTATAA 6 4 6 60 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr1:21070796-21070818 UUAUUUAU NA NA AUUUA UAUU minimal chr21 + 38833117 38833146 repeat Low_complexity-AT_rich RepeatMasker G10003.1 CTTTATTCATTCTTATTATTTAAAATATT 3 2 3 40 1 0.477121255 0 0 0 3 0 0 3 chr21:38833117-38833146 minimal NA NA AUUUA UAUU minimal chr21 + 38886082 38886105 3'utr DYRK1A Ensembl G10004.1 AATTTTACAAAAATTTATTTTCT 5 3 3 52 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr21:38886082-38886105 minimal NA NA AUUUA UAUU minimal chr21 + 38914216 38914237 NoAnnotation G10005.1 AATACATTATTTTTAATTTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr21:38914216-38914237 minimal NA NA AUUUA UAUU minimal chr21 + 38917724 38917749 NoAnnotation G10006.1 TCTTTTCAAATTACTTATATTTATT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr21:38917724-38917749 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr21 + 40195266 40195291 3'utr ETS2 Ensembl G10009.1 TATATATTATTATAATCTTATAATT 4 2 4 45 1 0.602059991 0.25 0 0 4 0 0 4 chr21:40195266-40195291 minimal NA NA NA UAUU minimal chr1 - 21082617 21082641 intron HP1BP3 Ensembl G1001.1 CATACCTTATACAATTTAATTTAT 11 5 10 106 0.909090909 1 0 0.25 0.454545455 6 1 0 10 chr1:21082617-21082641 minimal NA NA AUUUA NA minimal chr21 + 45086873 45086894 intron RRP1B Ensembl G10018.1 TATTTCCTATAAACTAATATT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr21:45086873-45086894 NA NA NA NA UAUU minimal chr21 + 45462120 45462141 intron TRAPPC10 Ensembl G10025.1 CATTTATTTTCATTCTTAAAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr21:45462120-45462141 minimal NA NA AUUUA UAUU minimal chr21 + 46716611 46716641 lincRNA NCRNA00205 Ensembl G10031.1 TGTCTCTGCCTTTCTAATATTTATACTTTG 5 4 5 56 1 0.698970004 0.8 0.25 0.4 3 0 0 5 chr21:46716611-46716641 minimal NA NA AUUUA UAUU minimal chr21 + 47989565 47989588 3'utr DIP2A Ensembl G10036.1 TATATCACACTAAAATTTTTATA 4 2 3 36 0.6 0.176091259 0 0.25 0.4 3 1 1 3 chr21:47989565-47989588 minimal NA NA NA NA NA chr21 - 15457318 15457349 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G10039.1 AAGCTACCATATGTGGGATTATGACTGAACG 74 4 6 563 0.06185567 -0.602059991 0.010309278 0.239130435 0.639175258 35 68 23 6 chr21:15457318-15457349 minimal NA NA NA NA NA chr21 - 15457412 15457437 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G10041.1 TTGCTGCCATGGTAATCCTGCTCAG 28 2 2 215 0.064516129 -0.301029996 0.064516129 0.307692308 0.709677419 9 26 3 2 chr21:15457412-15457437 NA NA NA NA NA NA chr21 - 15743835 15743856 3'utr HSPA13 Ensembl G10043.1 TCTTCAATCATATTTTAGTGG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr21:15743835-15743856 NA NA NA NA UAUU minimal chr21 - 15744395 15744416 3'utr HSPA13 Ensembl G10044.1 TTACTAATATTTTTCATATCT 5 2 5 54 1 0.698970004 0 0.5 0.8 1 0 0 5 chr21:15744395-15744416 NA NA NA NA UAUU minimal chr21 - 15744571 15744598 3'utr HSPA13 Ensembl G10046.1 CTTCATATTATTCAAAAATTATATCCT 5 2 5 50 1 0.698970004 0 0 0 5 0 0 5 chr21:15744571-15744598 minimal NA NA NA UAUU minimal chr21 - 15745391 15745416 3'utr HSPA13 Ensembl G10047.1 CCATATTATATAACAAATTTACATT 4 2 4 34 1 0.602059991 0 0.5 0.75 1 0 0 4 chr21:15745391-15745416 minimal NA NA AUUUA UAUU minimal chr21 - 15745606 15745634 3'utr HSPA13 Ensembl G10049.1 CACTTAACATTATATTCTATAAACATTA 7 6 7 58 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr21:15745606-15745634 minimal NA NA NA UAUU minimal chr21 - 19162724 19162747 3'utr C21orf91 Ensembl G10053.1 TTTTTCATTTTACTATATTTATG 4 2 4 55 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr21:19162724-19162747 minimal NA NA AUUUA UAUU minimal chr21 - 19165345 19165369 3'utr C21orf91 Ensembl G10054.1 AATTCATATCACCTCTTATTTATT 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:19165345-19165369 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr21 - 26951759 26951784 NoAnnotation G10058.1 TACCATTATTTATTCCCTATTTATG 4 3 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr21:26951759-26951784 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr21 - 26958003 26958031 coding MRPL39 Ensembl G10059.1 TACATCTACCTAATAACTTTCTAAAATT 5 3 4 45 0.8 0.602059991 0 0 0 5 1 0 4 chr21:26958003-26958031 NA NA NA NA NA NA chr21 - 26961312 26961334 intron MRPL39 Ensembl G10060.1 TCCACTTTTATAACCACTTATC 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:26961312-26961334 minimal NA NA NA NA NA chr21 - 27253685 27253717 3'utr APP Ensembl G10064.1 TATCAAACTAGTGCATGAATAGATTCTCTCCT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr21:27253685-27253717 NA NA NA NA NA NA chr21 - 27253746 27253768 3'utr APP Ensembl G10065.1 TCTCTATACTACATTATTAATG 6 4 6 52 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr21:27253746-27253768 minimal NA NA NA UAUU minimal chr21 - 27338708 27338737 intron APP Ensembl G10067.1 CTCTATACTTACATATTTATTATTTATTT 3 2 3 46 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:27338708-27338737 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 21483553 21483582 intron EIF4G3 Ensembl G1007.1 TATAATTTATTATTCATTTATTATTATTT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr1:21483553-21483582 minimal NA NA AUUUA UAUU minimal chr21 - 28208679 28208702 3'utr ADAMTS1 Ensembl G10070.1 AAAAAAACTTTTAAATTATATCG 6 3 6 42 1 0.77815125 0 0.666666667 0.833333333 1 0 0 6 chr21:28208679-28208702 minimal NA NA NA NA NA chr21 - 28208710 28208743 3'utr ADAMTS1 Ensembl G10071.1 CCTATAATAACATATTTATTTTTATACATTTAT 69 11 48 701 0.695652174 1.681241237 0 0.4375 0.739130435 18 21 0 48 chr21:28208710-28208743 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr21 - 28209526 28209547 3'utr ADAMTS1 Ensembl G10075.1 TACTTATCAAATACTTAGTAT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:28209526-28209547 minimal NA NA NA NA NA chr21 - 28209629 28209654 3'utr ADAMTS1 Ensembl G10076.1 CCCCGGGCATTATTATTATTATTTC 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr21:28209629-28209654 minimal NA NA NA UAUU minimal chr1 - 21502194 21502235 intron EIF4G3 Ensembl G1008.1 CTTCCATAATTATTATTAGTACATAATAAACTTTATCGGTA 38 4 37 339 0.973684211 1.568201724 0 0.4 0.842105263 6 1 0 37 chr1:21502194-21502235 minimal NA NA NA UAUU minimal chr21 - 30428706 30428730 3'utr CCT8 Ensembl G10083.1 TTTTCTTATTCTCCTTAAATTAAG 14 3 13 158 0.928571429 1.113943352 0 0.25 0.571428571 6 1 0 13 chr21:30428706-30428730 minimal NA NA NA UAUU minimal chr21 - 31839341 31839367 NoAnnotation G10086.1 TACTTATTATATTCTTATTTATAATT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:31839341-31839367 UUAUUUAU NA NA AUUUA UAUU minimal chr21 - 31852221 31852242 3'utr KRTAP19-1 Ensembl G10088.1 TTAAATCTTTAAAATAGATTT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr21:31852221-31852242 NA NA NA NA NA NA chr1 - 21922723 21922744 3'utr RAP1GAP Ensembl G1009.1 TATAAAATAAATTCTATTTAT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:21922723-21922744 minimal NA NA AUUUA UAUU minimal chr21 - 33043352 33043374 3'utr SCAF4 Ensembl G10091.1 TTTTTAATAAACTCTATTTTCG 6 3 6 63 1 0.77815125 0 0.25 0.5 3 0 0 6 chr21:33043352-33043374 NA NA NA NA UAUU minimal chr21 - 33074401 33074427 intron SCAF4 Ensembl G10093.1 ATTTTCTTTCCATAATTCCTATTTAT 5 4 5 69 1 0.698970004 0 0.25 0.4 3 0 0 5 chr21:33074401-33074427 minimal NA NA AUUUA UAUU minimal chr21 - 33076094 33076118 coding SCAF4 Ensembl G10094.1 CCACATTCCAATATTTATATCTTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr21:33076094-33076118 minimal NA NA AUUUA UAUU minimal chr21 - 33640917 33640941 3'utr MIS18A Ensembl G10097.1 TATCACATTTATTTACTATTTTTA 5 5 5 61 1 0.698970004 0 0 0 5 0 0 5 chr21:33640917-33640941 minimal NA NA AUUUA UAUU minimal chr1 + 33070878 33070900 NoAnnotation G101.1 TATTACTATTTATCATTTATAT 7 3 7 81 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr1:33070878-33070900 minimal NA NA AUUUA UAUU minimal chr21 - 34001164 34001193 3'utr SYNJ1 Ensembl G10101.1 CATACAATATTTATAACTATAAACTTTAT 7 5 6 64 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr21:34001164-34001193 minimal NA NA AUUUA UAUU minimal chr21 - 34130774 34130794 intron GCFC1 Ensembl G10103.1 CATTCTTATACTATTTATTG 5 3 5 50 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr21:34130774-34130794 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr21 - 35888822 35888849 3'utr RCAN1 Ensembl G10108.1 CTAACCTCAAAATATTTTTTTTAACTG 8 3 6 78 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr21:35888822-35888849 NA NA NA NA UAUU minimal chr1 - 22082670 22082693 intron USP48 Ensembl G1011.1 CCTAAACTTATTTTATTATTATT 3 2 2 35 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:22082670-22082693 minimal NA NA NA UAUU minimal chr21 - 37415250 37415275 intron SETD4 Ensembl G10111.1 TTTTATTATTACTATTTTTAATATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr21:37415250-37415275 minimal NA NA NA UAUU minimal chr21 - 38356674 38356696 repeat DNA-MER44B RepeatMasker G10114.1 TCATTCTTACTTTATTTAATTT 4 2 4 49 1 0.602059991 0 0.5 0.75 1 0 0 4 chr21:38356674-38356696 minimal NA NA AUUUA UAUU minimal chr21 - 40720102 40720127 intron HMGN1 Ensembl G10119.1 CTTTATTTATACTTTAATAATTACG 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr21:40720102-40720127 UUAUUUAU NA NA AUUUA UAUU minimal chr21 - 43390608 43390641 intron TMPRSS3 Ensembl G10122.1 CACCTTTATTCTAATCATTTTCCATCTTTATAG 3 3 3 45 1 0.477121255 0 0 0 3 0 0 3 chr21:43390608-43390641 minimal NA NA NA UAUU minimal chr21 - 43408704 43408727 3'utr ZNF295 Ensembl G10126.1 TTTTTCTATTACTTTTTATACTG 8 4 6 109 0.75 0.77815125 0 0 0 8 2 0 6 chr21:43408704-43408727 minimal NA NA NA UAUU minimal chr21 - 43408736 43408756 3'utr ZNF295 Ensembl G10127.1 AACCAAAAACATTTATAATG 3 2 3 12 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:43408736-43408756 minimal NA NA AUUUA NA minimal chr21 - 43409387 43409408 3'utr ZNF295 Ensembl G10128.1 ATATTCTCATTTTTTTTATTG 10 2 4 136 0.4 0.602059991 0 1 1 0 6 0 4 chr21:43409387-43409408 minimal NA NA NA UAUU minimal chr21 - 43410497 43410518 3'utr ZNF295 Ensembl G10131.1 ATAAATCTCAACTTTAATAAG 4 3 4 24 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr21:43410497-43410518 NA NA NA NA NA NA chr21 - 43410523 43410550 3'utr ZNF295 Ensembl G10132.1 ATTTATATCTTAGACTACTTTAGCAAT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr21:43410523-43410550 minimal NA NA AUUUA NA minimal chr21 - 43410623 43410650 3'utr ZNF295 Ensembl G10133.1 TATTCCTTCTTTTAATTATTTTAGACA 42 8 41 565 0.976190476 1.612783857 0 0.35 0.69047619 13 1 0 41 chr21:43410623-43410650 minimal NA NA NA UAUU minimal chr21 - 43413925 43413957 coding ZNF295 Ensembl G10135.1 TTTTAAACTACATTTATTCTTCCTCTCTATTT 7 6 7 79 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr21:43413925-43413957 minimal NA NA AUUUA UAUU minimal chr21 - 44232993 44233015 NoAnnotation G10137.1 ACATAATTTAATTTATTTAGTA 4 2 4 38 1 0.602059991 0 1 1 0 0 0 4 chr21:44232993-44233015 minimal NA NA AUUUA UAUU minimal chr21 - 44525866 44525894 intron U2AF1 Ensembl G10140.1 TTCATATTAACTTTAATTATTATTTAAG 23 8 22 269 0.956521739 1.342422681 0 0.176470588 0.391304348 14 1 0 22 chr21:44525866-44525894 minimal NA NA AUUUA UAUU minimal chr21 - 46218074 46218101 intron UBE2G2 Ensembl G10144.1 CAAATAATAATTATTTATTTATTTATT 11 6 9 154 0.818181818 0.954242509 0 0.428571429 0.636363636 4 2 0 9 chr21:46218074-46218101 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr21 - 46220020 46220040 repeat DNA-Tigger1 RepeatMasker G10145.1 TCTCTCTCTTACATTTTAAT 4 2 4 40 1 0.602059991 0 1 1 0 0 0 4 chr21:46220020-46220040 NA NA NA NA NA NA chr21 - 46226095 46226117 3'utr SUMO3 Ensembl G10146.1 CCTTTTTCTCCCTCTTAATATT 4 4 4 43 1 0.602059991 0 0 0 4 0 0 4 chr21:46226095-46226117 NA NA NA NA UAUU minimal chr21 - 46683965 46683989 3'utr POFUT2 Ensembl G10147.1 ACATATTTATTCTTTTTCCATTTG 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr21:46683965-46683989 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr21 - 47621645 47621665 intron LSS Ensembl G10148.1 TTACTTTAACACTATTTATA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr21:47621645-47621665 minimal NA NA AUUUA UAUU minimal chr1 - 23636407 23636428 3'utr HNRNPR Ensembl G1015.1 TTATAACTTCACACCTTTTTG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:23636407-23636428 minimal NA NA NA NA NA chr22 + 19956476 19956499 3'utr COMT Ensembl G10154.1 CTATATTATCTTATATACTAATA 4 3 3 40 0.75 0.477121255 0 0 0 4 1 0 3 chr22:19956476-19956499 minimal NA NA NA UAUU minimal chr22 + 20941878 20941899 3'utr MED15 Ensembl G10157.1 ATTATAATAAATTTATTATTC 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr22:20941878-20941899 minimal NA NA AUUUA UAUU minimal chr22 + 21242189 21242214 3'utr SNAP29 Ensembl G10158.1 AAATTTCATTTACTATTTTAGTATG 6 2 6 66 1 0.77815125 1 0.5 0.666666667 2 0 0 6 chr22:21242189-21242214 minimal NA NA AUUUA UAUU minimal chr1 - 23636766 23636790 3'utr HNRNPR Ensembl G1016.1 TCTTTTTATTTTTCCTCTTTTCAT 3 2 2 42 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:23636766-23636790 minimal NA NA NA UAUU minimal chr22 + 21307419 21307445 3'utr CRKL Ensembl G10162.1 TTTATAATTAATCCTTTAATATTATG 10 5 9 113 0.9 0.954242509 0.1 0.111111111 0.2 8 1 0 9 chr22:21307419-21307445 minimal NA NA NA UAUU minimal chr22 + 21307804 21307825 3'utr CRKL Ensembl G10163.1 CTTTTAAAATTATTTTTGGGG 3 3 3 30 1 0.477121255 0.666666667 0 0 3 0 0 3 chr22:21307804-21307825 minimal NA NA NA UAUU minimal chr22 + 24242694 24242719 repeat LTR-MER9a2 RepeatMasker G10172.1 TATACTTTTAGTTAATCTAATATCT 5 2 4 46 1 0.698970004 0.4 0 0 5 0 0 5 chr22:24242694-24242719 NA NA NA NA NA NA chr22 + 24968074 24968094 3'utr SNRPD3 Ensembl G10174.1 CTAAATAAATCTGGGGGGTT 4 2 4 20 1 0.602059991 0 0.5 0.75 1 0 0 4 chr22:24968074-24968094 NA NA NA NA NA NA chr1 - 23685958 23685987 3'utr ZNF436 Ensembl G1018.1 ATTATTCTAACAATATTCTATAATTAAAA 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:23685958-23685987 minimal NA NA NA UAUU minimal chr22 + 29453230 29453263 3'utr ZNRF3 Ensembl G10184.1 TTCTCAGAATATTTATTTACTAATATATTTATC 7 6 7 86 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr22:29453230-29453263 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 + 29542672 29542699 3'utr KREMEN1 Ensembl G10185.1 CACTGTATACAATTTAATATATATTTT 3 3 3 29 1 0.477121255 0.333333333 0 0 3 0 0 3 chr22:29542672-29542699 minimal NA NA AUUUA UAUU minimal chr22 + 31746728 31746756 NoAnnotation G10194.1 TATTCATTAACTAGATTTGTATTTATTG 3 2 3 41 1 0.477121255 0.333333333 0 0 3 0 0 3 chr22:31746728-31746756 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 + 35689741 35689762 repeat Simple_repeat-(TA)n RepeatMasker G10197.1 TTTTAAATTTTTATATCTATA 3 2 2 36 0.666666667 0.301029996 0 0 0 3 1 0 2 chr22:35689741-35689762 minimal NA NA NA NA NA chr22 + 35690642 35690706 3'utr HMGXB4 Ensembl G10198.1 TATTTTAATTATGTGTATTTAACTCTTTAAAATCTCTTAGATTTTAATTTATCCTGTAAATTTC 21 6 16 223 0.857142857 1.255272505 0.142857143 0.266666667 0.476190476 11 3 0 18 chr22:35690642-35690706 minimal NA NA AUUUA UAUU minimal chr1 - 24292062 24292086 3'utr SRSF10 Ensembl G1020.1 TTTCAAATATTTCTATTTAATCCT 8 7 8 88 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr1:24292062-24292086 minimal NA NA AUUUA UAUU minimal chr22 + 36878361 36878388 NoAnnotation G10202.1 CTTTATTTTATTTACATATATTTATTT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr22:36878361-36878388 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 + 38062911 38062935 3'utr PDXP Ensembl G10203.1 TACTTAATAAAGTGCGCGTGGGAG 3 2 3 14 0.75 0.176091259 1 0 0 4 0 1 3 chr22:38062911-38062935 NA NA NA NA NA NA chr1 - 24293265 24293286 3'utr SRSF10 Ensembl G1021.1 ATCACATTATTATAAATAATG 7 3 7 49 1 0.84509804 0 0.666666667 0.857142857 1 0 0 7 chr1:24293265-24293286 minimal NA NA NA UAUU minimal chr22 + 39910499 39910519 3'utr SMCR7L Ensembl G10210.1 TTACCCAACTCTTCCTATTT 4 2 4 30 1 0.602059991 0 1 1 0 0 0 4 chr22:39910499-39910519 NA NA NA NA UAUU minimal chr22 + 39911199 39911224 3'utr SMCR7L Ensembl G10211.1 TTTTCACACCTTTTCCTTATTTTAT 3 3 3 39 0.6 0 0.2 0 0 5 0 2 3 chr22:39911199-39911224 minimal NA NA NA UAUU minimal chr22 + 41575284 41575308 repeat Low_complexity-AT_rich RepeatMasker G10214.1 TTTTATTATTTTTTTTAAATTAAT 7 4 6 110 0.857142857 0.77815125 0.571428571 0.4 0.571428571 3 1 0 6 chr22:41575284-41575308 minimal NA NA NA UAUU minimal chr22 + 41575429 41575455 repeat Simple_repeat-(TA)n RepeatMasker G10215.1 TTACTTTAAAATTACATTCTATATAT 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr22:41575429-41575455 NA NA NA NA NA NA chr22 + 41697669 41697689 5'utr ZC3H7B Ensembl G10217.1 CATTTACTCTTATTATTACT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr22:41697669-41697689 minimal NA NA AUUUA UAUU minimal chr22 + 42226674 42226697 NoAnnotation G10220.1 ACACTATCTATTTCTCATTAGTT 8 2 7 78 0.7 0.367976785 0.5 0.125 0.3 7 1 2 7 chr22:42226674-42226697 NA NA NA NA UAUU minimal chr22 + 42354886 42354913 NoAnnotation G10222.1 CTGGGGCTTCCATCTTAATTTATTCTC 5 4 5 49 1 0.698970004 0 0 0 5 0 0 5 chr22:42354886-42354913 minimal NA NA AUUUA UAUU minimal chr1 - 24296598 24296620 3'utr SRSF10 Ensembl G1023.1 AATATTCTTATGTAGTTATTCT 11 6 11 116 1 1.041392685 0 0.333333333 0.636363636 4 0 0 11 chr1:24296598-24296620 minimal NA NA NA UAUU minimal chr22 + 51171571 51171592 repeat Low_complexity-AT_rich RepeatMasker G10237.1 TTTCTTATATTATTATTATTG 2 2 2 25 1 0.301029996 1 0 0 2 0 0 2 chr22:51171571-51171592 minimal NA NA NA UAUU minimal chr22 - 18281401 18281432 NoAnnotation G10240.1 CTCCAACACTATTTATCATTATAATATTTAT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr22:18281401-18281432 minimal NA NA AUUUA UAUU minimal chr22 - 22114810 22114832 3'utr MAPK1 Ensembl G10246.1 TTACAATTTAACATTAACATTT 3 2 2 27 0.666666667 0.301029996 0 0 0 3 1 0 2 chr22:22114810-22114832 minimal NA NA AUUUA NA minimal chr1 - 24298265 24298289 intron SRSF10 Ensembl G1025.1 CATTTAATTTTTTTTTACTATTTT 4 3 4 60 1 0.602059991 0 0 0 4 0 0 4 chr1:24298265-24298289 minimal NA NA AUUUA UAUU minimal chr22 - 24082556 24082584 NoAnnotation G10250.1 CAATATTTTAATCAATTATCTTTTAATT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr22:24082556-24082584 minimal NA NA NA UAUU minimal chr22 - 24936414 24936438 3'utr C22orf13 Ensembl G10251.1 CCATTCTCAATAAACATTATTCTC 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr22:24936414-24936438 minimal NA NA NA UAUU minimal chr22 - 28248391 28248424 3'utr PITPNB Ensembl G10252.1 CCACTTTTTTTAATTTAATTTTATTTTTTATTT 6 5 5 95 0.833333333 0.698970004 0 0 0 6 1 0 5 chr22:28248391-28248424 minimal NA NA AUUUA UAUU minimal chr22 - 29190863 29190886 3'utr XBP1 Ensembl G10264.1 TTTTCCCTAAAATACTTATTATG 5 2 5 46 1 0.698970004 0 0 0 5 0 0 5 chr22:29190863-29190886 minimal NA NA NA UAUU minimal chr22 - 29896523 29896550 NoAnnotation G10268.1 ATCATTCTTCTTTTCCTTTATTTATTT 4 3 3 68 0.75 0.477121255 0 0 0 4 1 0 3 chr22:29896523-29896550 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr22 - 30636502 30636528 3'utr LIF Ensembl G10272.1 TCATATTTAAAATATTTATTTTTTAT 13 5 7 168 0.538461538 0.84509804 0 0.222222222 0.461538462 7 6 0 7 chr22:30636502-30636528 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 - 30638542 30638567 3'utr LIF Ensembl G10273.1 ATATCCTATTTATATTAACTTATTG 4 4 4 46 1 0.602059991 0 0 0 4 0 0 4 chr22:30638542-30638567 minimal NA NA AUUUA UAUU minimal chr22 - 30728185 30728214 3'utr SF3A1 Ensembl G10275.1 AACCATTTTACTTTAAAATTAATAATATT 5 4 5 53 1 0.698970004 0 0.25 0.4 3 0 0 5 chr22:30728185-30728214 NA NA NA NA UAUU minimal chr22 - 30729752 30729773 3'utr SF3A1 Ensembl G10276.1 TATTTAACAAATACTTAATTG 4 3 4 31 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr22:30729752-30729773 minimal NA NA AUUUA UAUU minimal chr22 - 31292577 31292598 NoAnnotation G10277.1 CTTCATCTATTTATATTTATT 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr22:31292577-31292598 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 - 31722159 31722187 3'utr PATZ1 Ensembl G10278.1 TTTTAATTCTCTAATTATTATTATTATT 38 11 33 493 0.825 1.041392685 0 0.178571429 0.425 23 5 2 33 chr22:31722159-31722187 minimal NA NA NA UAUU minimal chr22 - 36170592 36170616 intron RBFOX2 Ensembl G10283.1 CATACATATATATTTAAATTATTT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr22:36170592-36170616 minimal NA NA AUUUA UAUU minimal chr22 - 38686889 38686912 3'utr CSNK1E Ensembl G10291.1 TTTTCCTAATTTATTTACCTCTG 7 4 7 81 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr22:38686889-38686912 minimal NA NA AUUUA UAUU minimal chr22 - 38881000 38881025 3'utr DDX17 Ensembl G10294.1 CACATTTAATTATAAACAATATATT 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr22:38881000-38881025 minimal NA NA AUUUA UAUU minimal chr22 - 38887242 38887269 intron DDX17 Ensembl G10295.1 TACCATATTATTCCCTTATACTATATA 7 4 5 64 0.625 0.397940009 0 0 0 8 2 1 5 chr22:38887242-38887269 minimal NA NA NA UAUU minimal chr22 - 39257944 39257969 3'utr CBX6 Ensembl G10300.1 TATCTTATAATTTTTTTAATTTTTG 4 2 3 61 0.75 0.477121255 0 0 0 4 1 0 3 chr22:39257944-39257969 minimal NA NA NA NA NA chr22 - 39260466 39260486 3'utr CBX6 Ensembl G10301.1 TTTTCGCCCAAATAAGGGCT 4 2 4 20 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr22:39260466-39260486 NA NA NA NA NA NA chr22 - 39709825 39709851 snoRNA SNORD83B Ensembl G10302.1 TCCTTGTTGCCTTCCTTCTGAGAACA 53 2 2 382 0.032786885 -0.653212514 0.016393443 0.363636364 0.770491803 14 51 8 2 chr22:39709825-39709851 NA NA NA NA NA NA chr22 - 41166180 41166204 3'utr SLC25A17 Ensembl G10311.1 ACATAATTTTTAGAATATTTATTT 7 2 7 78 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr22:41166180-41166204 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 - 41225552 41225583 intron ST13 Ensembl G10313.1 ATATTTTAATATAATACTTAATATTTATTAT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr22:41225552-41225583 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr22 - 41679576 41679599 repeat LINE-L2a RepeatMasker G10318.1 ATATCTTTATTTAACTATTTCCT 9 4 8 103 0.888888889 0.903089987 0 0.142857143 0.333333333 6 1 0 8 chr22:41679576-41679599 minimal NA NA AUUUA UAUU minimal chr1 - 25549487 25549528 3'utr SYF2 Ensembl G1032.1 TAATCTACTTTGTATACATTCTAATTATATTATTTTTCTAT 138 15 122 1621 0.865248227 1.484299839 0 0.445945946 0.709219858 41 16 3 122 chr1:25549487-25549528 minimal NA NA NA UAUU minimal chr22 - 43266616 43266648 3'utr PACSIN2 Ensembl G10326.1 CCATATTTAAAAATTATTTTCACTCTATTCTT 6 3 6 65 0.857142857 0.477121255 0 0.166666667 0.285714286 5 0 1 6 chr22:43266616-43266648 minimal NA NA AUUUA UAUU minimal chr22 - 43266881 43266902 3'utr PACSIN2 Ensembl G10328.1 TTCATTTCTACTTAAATTATG 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr22:43266881-43266902 minimal NA NA NA NA NA chr22 - 47047744 47047764 NoAnnotation G10338.1 GCTCCGTCTCTCTCCCCCCC 7 2 7 28 1 0.84509804 0.142857143 0.666666667 0.857142857 1 0 0 7 chr22:47047744-47047764 NA NA NA NA NA NA chr1 - 25568751 25568771 3'utr C1orf63 Ensembl G1034.1 TATATTTAATAAATTTCTTG 4 4 4 40 1 0.602059991 0 0 0 4 0 0 4 chr1:25568751-25568771 minimal NA NA AUUUA UAUU minimal chr22 - 50167011 50167032 3'utr BRD1 Ensembl G10341.1 TACTTTATTTTTATTTTTAAG 4 2 4 49 1 0.602059991 0 0.5 0.75 1 0 0 4 chr22:50167011-50167032 minimal NA NA NA UAUU minimal chr22 - 50167796 50167817 3'utr BRD1 Ensembl G10342.1 TTCAAAACTTAACTTATTCTG 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr22:50167796-50167817 minimal NA NA NA UAUU minimal chr22 - 50214257 50214278 intron BRD1 Ensembl G10344.1 CTTCTTATTTTTTATTTTATG 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr22:50214257-50214278 minimal NA NA NA UAUU minimal chr3 + 9519066 9519089 3'utr SETD5 Ensembl G10358.1 TTTTTATTTATCTAATTTTGTAT 10 4 9 136 0.9 0.954242509 0.7 0.166666667 0.5 5 1 0 9 chr3:9519066-9519089 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 26227113 26227140 3'utr STMN1 Ensembl G1036.1 TTCACTTTTCAATCCCAATTCTGTCCC 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:26227113-26227140 NA NA NA NA NA NA chr3 + 10055364 10055387 NoAnnotation G10362.1 CATTTTACTATTTACTATTTATT 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:10055364-10055387 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 10077563 10077585 repeat Low_complexity-AT_rich RepeatMasker G10364.1 TATTTAATAATATTTTAATTAT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:10077563-10077585 minimal NA NA AUUUA UAUU minimal chr3 + 10193275 10193316 3'utr VHL Ensembl G10365.1 TTCATACAGTTTTATACCCTTTTTCATTTAACTTTATAACT 42 13 37 510 0.880952381 1.568201724 0 0.21875 0.404761905 25 5 0 37 chr3:10193275-10193316 minimal NA NA AUUUA NA minimal chr1 - 26227331 26227353 3'utr STMN1 Ensembl G1037.1 TTTTAGGGGCTAAAGGGGAGAA 7 3 6 26 0.666666667 0.301029996 0 0.333333333 0.555555556 4 1 2 6 chr1:26227331-26227353 NA NA NA NA NA NA chr3 + 12567028 12567050 intron TSEN2 Ensembl G10376.1 TTCTTTCAGACCTTATTTTTAC 5 2 3 37 0.6 0.477121255 0.2 0.25 0.4 3 2 0 3 chr3:12567028-12567050 minimal NA NA NA UAUU minimal chr3 + 12578962 12578989 intron TSEN2 Ensembl G10377.1 CATTTCTTATATTATTTATTTTAGCTG 4 3 4 60 1 0.602059991 0.5 0 0 4 0 0 4 chr3:12578962-12578989 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 12624799 12624819 3'utr MKRN2 Ensembl G10379.1 AATTTATCTAATCTATTTTT 4 3 4 44 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr3:12624799-12624819 minimal NA NA AUUUA UAUU minimal chr1 - 26287935 26287956 3'utr PAFAH2 Ensembl G1038.1 ATCACATTTTCTATTTATTTC 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr1:26287935-26287956 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 12625096 12625121 repeat Low_complexity-AT_rich RepeatMasker G10380.1 CCATTACACCTAAATTTAATTTATT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr3:12625096-12625121 minimal NA NA AUUUA UAUU minimal chr3 + 14261326 14261349 NoAnnotation G10382.1 ATTACTAATTTCATCTCTTTACT 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr3:14261326-14261349 NA NA NA NA NA NA chr3 + 14776202 14776226 intron C3orf20 Ensembl G10385.1 TCAAATTTATTAATTTAATTTATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr3:14776202-14776226 minimal NA NA AUUUA UAUU minimal chr3 + 15480902 15480926 3'utr EAF1 Ensembl G10387.1 AATTATATTTCTATTTAGTTAAAA 4 2 4 43 1 0.602059991 0 0 0 4 0 0 4 chr3:15480902-15480926 minimal NA NA AUUUA UAUU minimal chr1 + 33321736 33321762 3'utr S100PBP Ensembl G104.1 ATTTTATTTTTCACAAAATTTTTATT 10 3 5 148 0.5 0.698970004 0 0.666666667 0.8 2 5 0 5 chr1:33321736-33321762 minimal NA NA NA UAUU minimal chr1 - 27204743 27204766 repeat DNA-MER113 RepeatMasker G1040.1 AAAAATATTAATTATATAATATG 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:27204743-27204766 minimal NA NA NA UAUU minimal chr1 - 27205431 27205454 repeat DNA-MER113 RepeatMasker G1041.1 TTTTATTCTATTGTTGACAAGTG 3 2 3 28 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr1:27205431-27205454 minimal NA NA NA UAUU minimal chr3 + 24019550 24019579 3'utr NR1D2 Ensembl G10413.1 TTATTACAATTATTCATAATAATATTCTT 11 5 8 118 0.75 0.653212514 0 0.2 0.333333333 8 2 1 9 chr3:24019550-24019579 minimal NA NA NA UAUU minimal chr1 - 27233367 27233387 NoAnnotation G1042.1 ACATTAACATTTATTTATTT 4 2 3 41 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:27233367-27233387 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 30735483 30735503 3'utr TGFBR2 Ensembl G10426.1 CTATATACTCTTTTTATATC 3 3 3 30 1 0.477121255 0.333333333 0 0 3 0 0 3 chr3:30735483-30735503 minimal NA NA NA NA NA chr3 + 31641858 31641894 coding STT3B Ensembl G10428.1 CTTGGGGTGGTTATGTATTTATCATCAATCTTATTC 6 5 6 60 1 0.77815125 0 0 0 6 0 0 6 chr3:31641858-31641894 minimal NA NA AUUUA UAUU minimal chr1 - 28218043 28218071 3'utr RPA2 Ensembl G1043.1 TTTAATAAAACAGTTCTATTGTAGTAAC 4 2 3 40 0.75 0.477121255 0 0 0 4 1 0 3 chr1:28218043-28218071 NA NA NA NA UAUU minimal chr3 + 37407847 37407874 3'utr GOLGA4 Ensembl G10436.1 CTTACATAATATTCCTTTCATCCATTC 13 3 12 120 0.923076923 1.079181246 0 0.25 0.538461538 6 1 0 12 chr3:37407847-37407874 NA NA NA NA UAUU minimal chr3 + 38527262 38527285 NoAnnotation G10440.1 CTTTTCTTTACCATTTATTTCTT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr3:38527262-38527285 minimal NA NA AUUUA UAUU minimal chr3 + 38530746 38530766 NoAnnotation G10441.1 TTCTACATATATATTTAGTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr3:38530746-38530766 minimal NA NA AUUUA UAUU minimal chr1 - 28358593 28358615 repeat srpRNA-7SLRNA RepeatMasker G1045.1 TCCTGGGCTGTAGTGCGCTATG 27 2 2 178 0.074074074 0.301029996 0.037037037 0.428571429 0.851851852 4 25 0 2 chr1:28358593-28358615 NA NA NA NA NA NA chr3 + 40562883 40562904 NoAnnotation G10452.1 TATAAATACTTAATAACTTAT 5 2 5 40 1 0.698970004 0 1 1 0 0 0 5 chr3:40562883-40562904 minimal NA NA NA NA NA chr3 + 40575619 40575655 repeat Low_complexity-AT_rich RepeatMasker G10453.1 TGAGCACTGGCTTCTATATTTTATTTCATATTTATG 24 9 21 351 0.84 1.021189299 0.48 0.263157895 0.44 14 3 1 21 chr3:40575619-40575655 minimal NA NA AUUUA UAUU minimal chr3 + 40580990 40581010 repeat DNA-Tigger1 RepeatMasker G10454.1 ATTAAACATAACTTTTATAG 3 2 3 21 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:40580990-40581010 minimal NA NA NA NA NA chr3 + 41281595 41281620 3'utr CTNNB1 Ensembl G10459.1 AACACTAATTCATAATCACTCTAAT 14 4 12 74 0.8 0.77815125 0 0.25 0.4 9 2 1 12 chr3:41281595-41281620 NA NA NA NA NA NA chr3 + 41281689 41281712 3'utr CTNNB1 Ensembl G10460.1 TCCAATTAGTTTCCTTTTTAATA 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr3:41281689-41281712 NA NA NA NA NA NA chr3 + 42687761 42687781 3'utr NKTR Ensembl G10467.1 TCTATTTCACTCTATCTTAC 4 2 4 36 1 0.602059991 0.5 0 0 4 0 0 4 chr3:42687761-42687781 NA NA NA NA UAUU minimal chr3 + 42688246 42688271 3'utr NKTR Ensembl G10468.1 CATTACTCTTATATATCATATATTA 9 3 7 87 0.777777778 0.84509804 0 0.142857143 0.333333333 6 2 0 7 chr3:42688246-42688271 minimal NA NA NA UAUU minimal chr3 + 43390154 43390179 3'utr SNRK Ensembl G10470.1 CAATTATTTATTACCTTTCCATTTG 4 2 4 42 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr3:43390154-43390179 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 44706346 44706369 NoAnnotation G10472.1 CTTTTATATATACTATATACTAT 4 3 4 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr3:44706346-44706369 minimal NA NA NA NA NA chr3 + 44706718 44706738 NoAnnotation G10474.1 ATAATTCTTAAATTCTATTC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:44706718-44706738 NA NA NA NA UAUU minimal chr3 + 44707517 44707539 NoAnnotation G10475.1 AAATTTTCTCATTATTTATATG 6 3 5 67 0.833333333 0.698970004 0.833333333 0.5 0.666666667 2 1 0 5 chr3:44707517-44707539 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 47390661 47390682 NoAnnotation G10484.1 TATTCCACTTATACCATATTT 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:47390661-47390682 minimal NA NA NA UAUU minimal chr3 + 49060688 49060711 3'utr NDUFAF3 Ensembl G10486.1 CTTATCAACATAATAATTTATAC 11 3 7 92 0.636363636 0.84509804 0 0.5 0.727272727 3 4 0 7 chr3:49060688-49060711 minimal NA NA AUUUA NA minimal chr3 + 51205516 51205538 intron DOCK3 Ensembl G10494.1 CCTTTATTTCTTATATATCTAA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:51205516-51205538 minimal NA NA NA UAUU minimal chr3 + 52248279 52248301 3'utr ALAS1 Ensembl G10498.1 TTATATTAAATTTTAATCTATA 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr3:52248279-52248301 minimal NA NA NA UAUU minimal chr1 - 29474805 29474827 3'utr SRSF4 Ensembl G1050.1 TACATTTTTAACTCCCCTAATG 4 2 4 31 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:29474805-29474827 NA NA NA NA NA NA chr3 + 52741984 52742009 3'utr SPCS1 Ensembl G10502.1 ATTTATATAAGTAGTTTAGACCTTC 16 2 13 122 0.9375 1.176091259 0.125 0.666666667 0.875 2 1 0 15 chr3:52741984-52742009 minimal NA NA AUUUA NA minimal chr3 + 53529194 53529220 repeat Simple_repeat-(ATG)n RepeatMasker G10504.1 TGATGATGATGATGATGATGAAAAAA 99 3 3 631 0.029126214 -0.22184875 0 0.352941176 0.893203883 11 96 4 3 chr3:53529194-53529220 NA NA NA NA NA NA chr3 + 56600898 56600918 intron CCDC66 Ensembl G10505.1 CTTATTACTTAATATTTATG 3 2 2 31 0.666666667 0.301029996 1 0 0 3 1 0 2 chr3:56600898-56600918 minimal NA NA AUUUA UAUU minimal chr3 + 57294542 57294563 repeat Low_complexity-AT_rich RepeatMasker G10507.1 CTTTAATATATTAAAATATTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr3:57294542-57294563 NA NA NA NA UAUU minimal chr3 + 57327446 57327471 repeat Low_complexity-AT_rich RepeatMasker G10508.1 TAACTTTTAATATTTTCCATATTTA 5 3 4 66 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr3:57327446-57327471 minimal NA NA AUUUA UAUU minimal chr3 + 58303244 58303273 3'utr RPP14 Ensembl G10512.1 AAACGTTCATCCACTCTCATATTTATTTT 11 6 11 120 1 1.041392685 0 0.25 0.454545455 6 0 0 11 chr3:58303244-58303273 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 67059262 67059284 3'utr KBTBD8 Ensembl G10518.1 ATCCTCATTCTTAATATTTATA 4 3 4 40 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr3:67059262-67059284 minimal NA NA AUUUA UAUU minimal chr3 + 73047430 73047452 repeat Low_complexity-AT_rich RepeatMasker G10522.1 TCATTTAAATAATTTATATATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:73047430-73047452 minimal NA NA AUUUA UAUU minimal chr3 + 73072844 73072866 intron PPP4R2 Ensembl G10523.1 CATATTAATTTAGAATATACTT 2 2 2 18 1 0.301029996 0.5 0 0 2 0 0 2 chr3:73072844-73072866 minimal NA NA AUUUA UAUU minimal chr3 + 73116081 73116101 3'utr PPP4R2 Ensembl G10526.1 TATTTTCAAATTTACATATT 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr3:73116081-73116101 minimal NA NA AUUUA UAUU minimal chr3 + 73117065 73117087 3'utr PPP4R2 Ensembl G10528.1 TTTAATAGTTTTAATATTTATT 3 2 3 31 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr3:73117065-73117087 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 31405165 31405189 3'utr PUM1 Ensembl G1053.1 CATATATACAAATTTGTAGTATTT 6 2 6 49 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:31405165-31405189 NA NA NA NA UAUU minimal chr3 + 77179634 77179659 intron ROBO2 Ensembl G10534.1 TATAACATAACCACATTTATTTATG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:77179634-77179659 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 88192325 88192345 3'utr ZNF654 Ensembl G10545.1 CATCCATATTTTATTAAATT 3 2 3 27 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr3:88192325-88192345 minimal NA NA NA UAUU minimal chr3 + 88206251 88206277 repeat Low_complexity-AT_rich RepeatMasker G10546.1 TATATTTTTAAAACTATTAAATATTT 5 4 4 59 0.8 0.602059991 0.2 0 0 5 1 0 4 chr3:88206251-88206277 NA NA NA NA UAUU minimal chr3 + 88206863 88206886 3'utr C3orf38 Ensembl G10548.1 ATTTACTTAGTTACTTTAATTTA 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr3:88206863-88206886 minimal NA NA AUUUA NA minimal chr3 + 88207252 88207274 NoAnnotation G10549.1 CAAAATAATTTCCTCTCATATT 4 2 4 31 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr3:88207252-88207274 NA NA NA NA UAUU minimal chr1 - 31435569 31435595 intron PUM1 Ensembl G1055.1 CTATCTTCTAATAAAACCTTATTTAT 8 5 7 84 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr1:31435569-31435595 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 88451829 88451849 repeat LINE-L1ME3C RepeatMasker G10552.1 CACACATATATATTTGCACG 3 2 3 15 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:88451829-88451849 NA NA NA NA UAUU minimal chr3 + 93765656 93765677 intron ARL13B Ensembl G10559.1 CCATTTTTCTCTTATTTTAAT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr3:93765656-93765677 minimal NA NA NA UAUU minimal chr3 + 93773802 93773823 3'utr ARL13B Ensembl G10560.1 CTATCTTTTTAATATTTATCT 4 2 3 48 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr3:93773802-93773823 minimal NA NA AUUUA UAUU minimal chr3 + 93845394 93845414 3'utr NSUN3 Ensembl G10564.1 TTAATATTTAAATAATTATG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:93845394-93845414 minimal NA NA AUUUA UAUU minimal chr3 + 99792071 99792096 repeat DNA-MER58A RepeatMasker G10573.1 AACTCCACCATACTCATTTATTTAT 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr3:99792071-99792096 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 101284340 101284360 coding RG9MTD1 Ensembl G10582.1 ATCCTTTCCATATTTATTTC 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:101284340-101284360 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 101285009 101285029 3'utr RG9MTD1 Ensembl G10584.1 TCTTTTCCCAATTAAATATC 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr3:101285009-101285029 NA NA NA NA NA NA chr3 + 101312542 101312562 3'utr PCNP Ensembl G10586.1 ATTTAAATTACTAACTTATG 13 3 10 107 0.769230769 1 1 0.75 0.923076923 1 3 0 10 chr3:101312542-101312562 minimal NA NA AUUUA NA minimal chr1 - 31451221 31451244 intron PUM1 Ensembl G1059.1 CTAACCATCATTAATATTTATTG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:31451221-31451244 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 101486223 101486252 3'utr CEP97 Ensembl G10590.1 TCTTCTTAAATATACCCTATTTTTCTATT 4 3 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr3:101486223-101486252 NA NA NA NA UAUU minimal chr3 + 101488800 101488826 3'utr CEP97 Ensembl G10593.1 AATTTTAATTCTTATTTATTTTAGTG 7 4 7 96 1 0.84509804 0.428571429 0.166666667 0.285714286 5 0 0 7 chr3:101488800-101488826 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 101489169 101489192 3'utr CEP97 Ensembl G10594.1 TTCATCTTCTAATTAAATATCTT 7 3 6 71 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr3:101489169-101489192 NA NA NA NA NA NA chr3 + 107524798 107524823 3'utr BBX Ensembl G10598.1 TTATACCTACATTTATATTGTAGAA 21 4 16 178 0.857142857 1.255272505 0.666666667 0.666666667 0.857142857 3 3 0 18 chr3:107524798-107524823 minimal NA NA AUUUA UAUU minimal chr3 + 107527677 107527698 3'utr BBX Ensembl G10600.1 AAATATATTTATTTAATTCTG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:107527677-107527698 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 108250309 108250330 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G10604.1 TTGCAGCAGGTCTCCAAGGTC 4 2 3 14 0.117647059 -0.889301703 0 0.571428571 0.911764706 3 0 30 4 chr3:108250309-108250330 NA NA NA NA NA NA chr3 + 108411754 108411777 repeat Low_complexity-AT_rich RepeatMasker G10605.1 TTTTAATAAATACCTAATATATT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr3:108411754-108411777 NA NA NA NA UAUU minimal chr1 - 31460840 31460864 intron PUM1 Ensembl G1061.1 TTAATTATATATTTACTTATTTAT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr1:31460840-31460864 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 111445143 111445177 intron PLCXD2 Ensembl G10610.1 CTATTATACTTAGTAACTTATACCCCAATATAAT 8 3 5 66 0.875 0.84509804 0 0.333333333 0.5 4 1 0 7 chr3:111445143-111445177 minimal NA NA NA UAUU minimal chr3 + 112300060 112300083 coding SLC35A5 Ensembl G10613.1 TCCTTCTCTCTATATTTATTTAT 8 4 6 100 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr3:112300060-112300083 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 112301641 112301661 3'utr SLC35A5 Ensembl G10614.1 TAATATTTATCTTTTCACTT 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr3:112301641-112301661 minimal NA NA AUUUA UAUU minimal chr3 + 112896263 112896287 NoAnnotation G10616.1 TTATCATCATCATCACAGCAAGTT 3 2 2 17 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:112896263-112896287 minimal NA NA NA NA NA chr1 - 31466309 31466334 intron PUM1 Ensembl G1062.1 TTTATATAATATTATATATTAGTCT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:31466309-31466334 minimal NA NA NA UAUU minimal chr1 - 31492235 31492259 intron PUM1 Ensembl G1063.1 CAATTCTATCTAATATCTAATTTG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr1:31492235-31492259 NA NA NA NA NA NA chr1 - 31732549 31732572 3'utr SNRNP40 Ensembl G1064.1 TATTTCTCTATATCATTTTGTAT 7 3 7 82 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr1:31732549-31732572 NA NA NA NA UAUU minimal chr3 + 131601518 131601538 repeat DNA-MADE1 RepeatMasker G10649.1 TTCTCATTATTTATTAGCTT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:131601518-131601538 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 133308635 133308656 3'utr CDV3 Ensembl G10650.1 ATGCCTGCCTTCTAATATATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:133308635-133308656 NA NA NA NA UAUU minimal chr3 + 134584069 134584089 intron EPHB1 Ensembl G10653.1 TATATTATAAACTATCTTAT 3 2 2 27 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:134584069-134584089 minimal NA NA NA UAUU minimal chr3 + 136574672 136574697 3'utr TMEM22 Ensembl G10657.1 AAAATTTATTCTAGTCTAATATATT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr3:136574672-136574697 minimal NA NA AUUUA UAUU minimal chr1 - 32324284 32324310 NoAnnotation G1066.1 CTTACAAATCTTATTATTCTATTTAT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:32324284-32324310 minimal NA NA AUUUA UAUU minimal chr3 + 139078409 139078439 NoAnnotation G10662.1 AATCTACTTAACTTAATTATTATAATTCCT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr3:139078409-139078439 minimal NA NA NA UAUU minimal chr3 + 140697426 140697446 3'utr SLC25A36 Ensembl G10668.1 ATAAACATATATTCTCTATT 7 2 6 57 0.857142857 0.77815125 0 0.5 0.714285714 2 1 0 6 chr3:140697426-140697446 NA NA NA NA UAUU minimal chr3 + 141259636 141259664 intron RASA2 Ensembl G10673.1 TCATTAATTTATTCAACTAATATTTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr3:141259636-141259664 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 141260255 141260281 intron RASA2 Ensembl G10674.1 CTACTATATATAATATTTATTTCATT 5 2 2 60 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr3:141260255-141260281 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 142747093 142747117 intron U2SURP Ensembl G10676.1 CAAATAATATTTCTCATTTATTTA 4 2 3 45 0.75 0.477121255 0 0 0 4 1 0 3 chr3:142747093-142747117 minimal NA NA AUUUA UAUU minimal chr3 + 143709819 143709839 3'utr C3orf58 Ensembl G10678.1 CATCATAACTTTTCATTTAT 7 4 7 63 1 0.84509804 0 0.75 0.857142857 1 0 0 7 chr3:143709819-143709839 minimal NA NA AUUUA NA minimal chr1 - 32830354 32830376 NoAnnotation G1068.1 TCTATTTTAATTAACTTTAGTA 6 2 6 66 1 0.77815125 0 0.5 0.833333333 1 0 0 6 chr1:32830354-32830376 NA NA NA NA UAUU minimal chr1 - 32830873 32830899 3'utr BSDC1 Ensembl G1069.1 CAATATTATATATTTTAAATTATAAT 8 6 7 88 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr1:32830873-32830899 minimal NA NA NA UAUU minimal chr3 + 150179463 150179484 NoAnnotation G10690.1 AATTTTTCCAATTCTATTTAT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:150179463-150179484 minimal NA NA AUUUA UAUU minimal chr3 + 150181191 150181211 NoAnnotation G10691.1 CCTCTTAATAATCCATATTT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr3:150181191-150181211 NA NA NA NA UAUU minimal chr3 + 150302122 150302142 NoAnnotation G10696.1 TAATTCTTTTAATCTCTATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:150302122-150302142 NA NA NA NA UAUU minimal chr3 + 152045591 152045612 intron MBNL1 Ensembl G10706.1 TCATATAGTAGCATTTTTTTT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:152045591-152045612 NA NA NA NA NA NA chr3 + 152204407 152204431 repeat Low_complexity-AT_rich RepeatMasker G10714.1 CTTACTAAATTATTTATATTTATA 7 4 6 81 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr3:152204407-152204431 UUAUUUAU NA NA AUUUA UAUU minimal chr3 + 152882320 152882349 repeat Low_complexity-AT_rich RepeatMasker G10718.1 TATTTAGCTCCCCTTTCATATTATTTTTA 4 2 3 45 1 0.602059991 0 0 0 4 0 0 4 chr3:152882320-152882349 minimal NA NA AUUUA UAUU minimal chr3 + 153871210 153871234 intron ARHGEF26 Ensembl G10720.1 TAAAATTTTCCATATTTACTTATC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:153871210-153871234 minimal NA NA AUUUA UAUU minimal chr3 + 156423097 156423121 3'utr TIPARP Ensembl G10726.1 ACCACTTACTCTTTAATTATTTAC 13 4 11 123 0.846153846 1.041392685 0 0.25 0.538461538 6 2 0 11 chr3:156423097-156423121 minimal NA NA AUUUA UAUU minimal chr3 + 156423306 156423326 3'utr TIPARP Ensembl G10727.1 ATTCTATTTATTTATTTACG 9 2 4 104 0.555555556 0.698970004 0.888888889 0.5 0.777777778 2 4 0 5 chr3:156423306-156423326 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 156424284 156424304 3'utr TIPARP Ensembl G10728.1 CTTCCACACACTTATTTATT 6 3 6 48 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr3:156424284-156424304 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 157944781 157944803 repeat Low_complexity-AT_rich RepeatMasker G10734.1 TAAATTAATTTAATATTATTTA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:157944781-157944803 minimal NA NA AUUUA UAUU minimal chr1 - 35656260 35656281 intron SFPQ Ensembl G1074.1 TTTATTCTAATAATTTCTATC 6 3 6 63 1 0.77815125 0 0.666666667 0.833333333 1 0 0 6 chr1:35656260-35656281 minimal NA NA NA UAUU minimal chr3 + 158323418 158323440 3'utr MLF1 Ensembl G10741.1 TTTAAATAATTTATCTCTAATT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr3:158323418-158323440 minimal NA NA AUUUA NA minimal chr3 + 158324149 158324174 repeat Low_complexity-AT_rich RepeatMasker G10742.1 TTCATACTTCTCTAATTTTTTATAT 7 3 5 91 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr3:158324149-158324174 minimal NA NA NA NA NA chr3 + 159614709 159614735 repeat Low_complexity-AT_rich RepeatMasker G10746.1 CTTCTTAATTTATTTTAATTTTTTAC 3 2 3 46 1 0.477121255 0 0 0 3 0 0 3 chr3:159614709-159614735 minimal NA NA AUUUA UAUU minimal chr3 + 159614831 159614852 3'utr IQCJ-SCHIP1 Ensembl G10748.1 TTTTAACTTTATTTTTATTTG 3 2 3 40 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr3:159614831-159614852 minimal NA NA NA UAUU minimal chr3 + 160119893 160119916 intron SMC4 Ensembl G10753.1 AAATAACTATTTTATAACTTTTT 5 3 5 54 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr3:160119893-160119916 minimal NA NA NA UAUU minimal chr3 + 160152567 160152589 3'utr SMC4 Ensembl G10756.1 TTAAATTTCTGGGTATTTATCC 11 3 11 106 1 1.041392685 0 0.285714286 0.545454545 5 0 0 11 chr3:160152567-160152589 minimal NA NA AUUUA UAUU minimal chr1 - 36067598 36067623 3'utr PSMB2 Ensembl G1076.1 CTTATTTCACTTAACACTATATTAG 5 3 5 46 0.833333333 0.397940009 0 0.25 0.5 3 0 1 5 chr1:36067598-36067623 minimal NA NA NA UAUU minimal chr3 + 160954693 160954716 intron NMD3 Ensembl G10761.1 ATCTATATATCTATCCTTATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:160954693-160954716 minimal NA NA NA UAUU minimal chr3 + 169711616 169711646 3'utr SEC62 Ensembl G10767.1 TTACTTATTATTTAGATATTTCTCAACACT 2 2 2 19 1 0.301029996 0 0 0 2 0 0 2 chr3:169711616-169711646 minimal NA NA AUUUA UAUU minimal chr3 + 169713611 169713631 repeat DNA-MER82 RepeatMasker G10769.1 ACACCTTATTTAATATAATC 3 3 3 21 1 0.477121255 0.666666667 0 0 3 0 0 3 chr3:169713611-169713631 minimal NA NA AUUUA UAUU minimal chr1 - 36068474 36068502 3'utr PSMB2 Ensembl G1077.1 CCCTTAAACTTAAATTTTTAAATTAATT 6 5 6 62 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:36068474-36068502 NA NA NA NA NA NA chr3 + 170113176 170113201 NoAnnotation G10777.1 AACTAATTTTATAACATATTTAATA 7 5 6 67 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr3:170113176-170113201 minimal NA NA AUUUA UAUU minimal chr3 + 172116064 172116084 3'utr FNDC3B Ensembl G10780.1 TATATAACTACTTCTAATCT 4 3 4 31 1 0.602059991 0 0 0 4 0 0 4 chr3:172116064-172116084 NA NA NA NA NA NA chr1 - 36200682 36200702 intron CLSPN Ensembl G1079.1 AACATAACCCTTATTTATTG 9 3 7 65 0.777777778 0.84509804 0 0.5 0.666666667 3 2 0 7 chr1:36200682-36200702 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 179052322 179052345 repeat Low_complexity-AT_rich RepeatMasker G10796.1 TAACTTTTTTAAATTATAAAATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr3:179052322-179052345 minimal NA NA NA NA NA chr3 + 179306023 179306052 3'utr ACTL6A Ensembl G10799.1 TCTATTTTCTCTAAATATTTTGCTTTCAG 2 2 2 30 1 0.301029996 1 0 0 2 0 0 2 chr3:179306023-179306052 NA NA NA NA UAUU minimal chr1 - 36603435 36603461 coding TRAPPC3 Ensembl G1081.1 ATAACCACTCATCCCTTATTTATTCC 15 3 12 135 0.75 0.77815125 0 0.333333333 0.625 6 3 1 12 chr1:36603435-36603461 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 182633679 182633709 intron ATP11B Ensembl G10810.1 TTTAACTTAGTAATTAATATCATATTAGAC 7 2 7 55 1 0.84509804 0 0.333333333 0.714285714 2 0 0 7 chr3:182633679-182633709 NA NA NA NA UAUU minimal chr3 + 183173469 183173490 NoAnnotation G10812.1 TTCTCTATCACTTAATAATAT 11 3 4 101 0.363636364 0.602059991 0 0.375 0.545454545 5 7 0 4 chr3:183173469-183173490 NA NA NA NA NA NA chr3 + 183399223 183399245 NoAnnotation G10814.1 TATTAACTATTTACTTTTATTT 6 3 4 74 0.666666667 0.602059991 0.166666667 0 0 6 2 0 4 chr3:183399223-183399245 minimal NA NA AUUUA UAUU minimal chr3 + 185351231 185351255 3'utr SENP2 Ensembl G10824.1 ATAATTTTTTTCTTTTAATTTACC 7 5 6 99 0.857142857 0.77815125 0 0 0 7 1 0 6 chr3:185351231-185351255 minimal NA NA AUUUA NA minimal chr3 + 188596590 188596611 3'utr LPP Ensembl G10834.1 TCAACTTTTCATCTTAATATA 4 3 3 37 1 0.602059991 0.25 0 0 4 0 0 4 chr3:188596590-188596611 NA NA NA NA NA NA chr3 + 191110946 191110968 3'utr CCDC50 Ensembl G10836.1 CAATATTTATTTTCCCTTATTT 9 3 6 105 0.777777778 0.84509804 0 0.5 0.666666667 3 2 0 7 chr3:191110946-191110968 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 37958853 37958880 3'utr MEAF6 Ensembl G1084.1 TTTTTTCACTTATTTATTCATATCATG 4 2 4 51 1 0.602059991 0 0 0 4 0 0 4 chr1:37958853-37958880 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 196311619 196311657 repeat Low_complexity-AT_rich RepeatMasker G10845.1 AAACTGGTTGGGTTTTATTTAATATTTTTAATATATTG 16 7 14 224 0.875 1.146128036 0.0625 0.166666667 0.375 10 2 0 14 chr3:196311619-196311657 minimal NA NA AUUUA UAUU minimal chr3 + 196455139 196455163 repeat LINE-L1ME3B RepeatMasker G10848.1 CCTTATAATAATTCACTAAACTAT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr3:196455139-196455163 minimal NA NA NA NA NA chr1 - 37958942 37958967 3'utr MEAF6 Ensembl G1085.1 TTCTTTTTAAATAACTTTTTATTCT 5 2 5 71 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr1:37958942-37958967 minimal NA NA NA UAUU minimal chr3 + 196558174 196558208 3'utr PAK2 Ensembl G10852.1 TATTATTATAGTACTTATTTATTTTATTTTAGAT 7 2 7 98 1 0.84509804 0 0.666666667 0.857142857 1 0 0 7 chr3:196558174-196558208 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 + 196657915 196657936 3'utr SENP5 Ensembl G10853.1 TTACCTCAAATTTATTTTTTG 5 2 4 54 0.8 0.602059991 1 0.25 0.4 3 1 0 4 chr3:196657915-196657936 minimal NA NA AUUUA UAUU minimal chr3 + 196658017 196658042 3'utr SENP5 Ensembl G10854.1 TCCCCCATATTTAATATTTATTATT 15 4 12 166 0.8 1.079181246 0 0.444444444 0.666666667 5 3 0 12 chr3:196658017-196658042 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 + 197510750 197510770 3'utr FYTTD1 Ensembl G10856.1 CATTAAATAACAAATTATCT 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:197510750-197510770 minimal NA NA NA NA NA chr3 - 3202048 3202069 intron CRBN Ensembl G10863.1 TAATTATTTATATAAATTATT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr3:3202048-3202069 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 8924895 8924918 intron RAD18 Ensembl G10874.1 CCATATATATTTACATATTTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:8924895-8924918 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 8935960 8935988 intron RAD18 Ensembl G10875.1 CTCTCTTCATTTTATCTTTCTTTAGTTC 3 3 3 45 1 0.477121255 0 0 0 3 0 0 3 chr3:8935960-8935988 minimal NA NA NA NA NA chr3 - 11598125 11598150 3'utr VGLL4 Ensembl G10887.1 CTATTTAATTTTTCCCTTTCCTATT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr3:11598125-11598150 minimal NA NA AUUUA UAUU minimal chr3 - 12625105 12625132 3'utr RAF1 Ensembl G10892.1 TATTTTAATAAAATAAATTAAATTTAG 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr3:12625105-12625132 minimal NA NA AUUUA UAUU minimal chr3 - 12648629 12648652 intron RAF1 Ensembl G10894.1 ATTTATTCCTTCTATTTTAGTCT 4 2 4 52 1 0.602059991 0 0.5 0.75 1 0 0 4 chr3:12648629-12648652 minimal NA NA AUUUA UAUU minimal chr3 - 14984877 14984907 NoAnnotation G10898.1 TATTCATACAATATTAATATAATTGTCCCC 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr3:14984877-14984907 NA NA NA NA UAUU minimal chr1 + 35797673 35797694 intron ZMYM4 Ensembl G109.1 TCTATTAATCATTTATTAAAT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:35797673-35797694 minimal NA NA AUUUA UAUU minimal chr3 - 15641628 15641652 intron HACL1 Ensembl G10905.1 CTTAATATTATACATTATTTATTA 6 3 5 73 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr3:15641628-15641652 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 38002961 38002992 3'utr SNIP1 Ensembl G1091.1 TTCTCTTTGTACAGTTACTTTATTTATATAG 7 2 7 83 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr1:38002961-38002992 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 17500625 17500649 intron TBC1D5 Ensembl G10912.1 TCTTTATCTTACTTATATTTATAT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr3:17500625-17500649 minimal NA NA AUUUA UAUU minimal chr3 - 23931455 23931477 NoAnnotation G10922.1 ATCTTTAATAAATTTATATTTG 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr3:23931455-23931477 minimal NA NA AUUUA UAUU minimal chr3 - 23934373 23934394 3'utr NKIRAS1 Ensembl G10923.1 AAATAATATATTCTTATTCTC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:23934373-23934394 minimal NA NA NA UAUU minimal chr3 - 33128420 33128450 intron GLB1 Ensembl G10932.1 TTTATTTCTACTCTAATATTTTATTTCCTT 5 3 4 78 0.8 0.602059991 0 0 0 5 1 0 4 chr3:33128420-33128450 minimal NA NA NA UAUU minimal chr3 - 33128530 33128560 intron GLB1 Ensembl G10933.1 ATTTATTTATATCTTCTTTTTTTTAAATCT 9 3 6 135 0.666666667 0.77815125 0 0.285714286 0.444444444 5 3 0 6 chr3:33128530-33128560 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 33128598 33128621 intron GLB1 Ensembl G10934.1 CTATTCTCTTACAATTCTTTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:33128598-33128621 minimal NA NA NA UAUU minimal chr3 - 33614310 33614331 intron CLASP2 Ensembl G10939.1 TTATTAATTTTAATATTTAAT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:33614310-33614331 minimal NA NA AUUUA UAUU minimal chr3 - 33724703 33724733 intron CLASP2 Ensembl G10942.1 TTTCATTATATATTCATTTATTATTTAGTA 3 2 2 47 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:33724703-33724733 minimal NA NA AUUUA UAUU minimal chr3 - 35656397 35656418 NoAnnotation G10945.1 AATTACTATATTAAATCTAGA 4 2 3 29 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr3:35656397-35656418 NA NA NA NA UAUU minimal chr3 - 37032346 37032366 3'utr EPM2AIP1 Ensembl G10948.1 TCTTAAATTATCAACTCCTT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:37032346-37032366 minimal NA NA NA NA NA chr1 - 38147438 38147471 3'utr C1orf109 Ensembl G1095.1 TATTATATCTACAATTTACCTTTTTTCTTAGAT 6 4 4 68 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr1:38147438-38147471 minimal NA NA AUUUA UAUU minimal chr3 - 39184084 39184112 3'utr CSRNP1 Ensembl G10951.1 ACTATAATTTATTTCCATAATTTATTTG 9 3 7 116 0.777777778 0.84509804 0 0.125 0.222222222 7 2 0 7 chr3:39184084-39184112 minimal NA NA AUUUA UAUU minimal chr3 - 44484801 44484823 3'utr ZNF445 Ensembl G10956.1 TACTATAATTATATAAATATTA 6 4 6 53 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr3:44484801-44484823 minimal NA NA NA UAUU minimal chr3 - 44540348 44540370 NoAnnotation G10957.1 TTATATTACCTTTATTCTATTG 4 4 4 45 1 0.602059991 0 0 0 4 0 0 4 chr3:44540348-44540370 minimal NA NA NA UAUU minimal chr1 - 38147727 38147750 3'utr C1orf109 Ensembl G1096.1 TCTATTTACAAATTTTTTCTTTT 5 4 5 68 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:38147727-38147750 minimal NA NA AUUUA UAUU minimal chr3 - 45867700 45867723 3'utr LZTFL1 Ensembl G10961.1 TCATATCCCCTCTCCTTATTTTT 4 2 4 43 1 0.602059991 0 0.5 0.75 1 0 0 4 chr3:45867700-45867723 minimal NA NA NA UAUU minimal chr3 - 47057966 47057995 3'utr SETD2 Ensembl G10963.1 CTTAAAATCACTTTACTTTATCCAATTTT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr3:47057966-47057995 minimal NA NA NA NA NA chr3 - 47513961 47513983 repeat DNA-Charlie7 RepeatMasker G10967.1 CTTCATTTAATTATTATTATTA 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:47513961-47513983 minimal NA NA AUUUA UAUU minimal chr1 - 38268746 38268771 3'utr YRDC Ensembl G1097.1 TTAATTATACCCATAACACCTTTAT 3 2 2 23 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:38268746-38268771 minimal NA NA NA NA NA chr3 - 48122921 48122952 intron MAP4 Ensembl G10970.1 TAACTAATTTAAATTATACTCCTATAATATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr3:48122921-48122952 minimal NA NA AUUUA UAUU minimal chr3 - 48725505 48725539 3'utr IP6K2 Ensembl G10976.1 TCTTTATTTATTTTAACTATTTCTTCAACATTCC 23 12 20 326 0.869565217 1.301029996 0 0.095238095 0.173913043 19 3 0 20 chr3:48725505-48725539 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 - 48786781 48786807 3'utr PRKAR2A Ensembl G10977.1 TATTTATTTAAAACCCATTTAGCCTT 9 3 7 87 0.777777778 0.84509804 0 0.285714286 0.444444444 5 2 0 7 chr3:48786781-48786807 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 38277356 38277379 NoAnnotation G1098.1 TTTTATTTTCAGGGTCAAGGCTG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:38277356-38277379 minimal NA NA NA UAUU minimal chr3 - 49397539 49397566 3'utr RHOA Ensembl G10982.1 CCTTTTTCATTTATCTATAATTTACCT 7 5 7 77 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr3:49397539-49397566 minimal NA NA AUUUA NA minimal chr3 - 51967501 51967522 coding RRP9 Ensembl G10986.1 ACACTCTTATCCTCCTTATTT 3 2 3 27 0.6 0 0 0.666666667 0.8 1 0 2 3 chr3:51967501-51967522 minimal NA NA NA UAUU minimal chr3 - 52016300 52016325 intron ABHD14B Ensembl G10987.1 CTAATTATTTACCTATTTATTCATG 7 6 7 76 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr3:52016300-52016325 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 53320459 53320482 lincRNA DCP1A Ensembl G11000.1 ATTTCTATTTATTCTTTTATGGC 8 5 8 104 1 0.903089987 0 0.2 0.5 4 0 0 8 chr3:53320459-53320482 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 55500212 55500236 3'utr WNT5A Ensembl G11005.1 CTATACTTTTAAAATATTTATTTT 16 5 14 191 0.875 1.146128036 0 0.4 0.625 6 2 0 14 chr3:55500212-55500236 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 55503934 55503962 3'utr WNT5A Ensembl G11006.1 TTTATTATTAATATTATAATTATTATTT 4 4 4 57 1 0.602059991 0 0 0 4 0 0 4 chr3:55503934-55503962 minimal NA NA NA UAUU minimal chr3 - 56657000 56657024 3'utr C3orf63 Ensembl G11008.1 TTTATTAACAATTTATATTTCATT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr3:56657000-56657024 minimal NA NA AUUUA UAUU minimal chr3 - 61065183 61065212 intron FHIT Ensembl G11016.1 TATTATCCTATTTTTACTATTTATTTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr3:61065183-61065212 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 - 70988166 70988187 repeat LINE-L1ME1 RepeatMasker G11028.1 ACAAATATCCACTTTATTTAT 4 2 3 32 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr3:70988166-70988187 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 71331508 71331533 intron FOXP1 Ensembl G11030.1 TATTTTTAAATATCTTTAATAAATA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr3:71331508-71331533 NA NA NA NA UAUU minimal chr3 - 71520403 71520427 intron FOXP1 Ensembl G11031.1 ACTTATTATACTATATAATTTATA 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:71520403-71520427 minimal NA NA AUUUA UAUU minimal chr3 - 72425528 72425549 3'utr RYBP Ensembl G11036.1 CTTATCTTTTTAAATACATTT 4 3 4 44 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr3:72425528-72425549 minimal NA NA NA NA NA chr3 - 72426093 72426122 3'utr RYBP Ensembl G11037.1 TTCTATTTCATTCTCTTCACTCTTTTTAC 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr3:72426093-72426122 NA NA NA NA UAUU minimal chr1 - 40042056 40042078 5'utr PABPC4 Ensembl G1104.1 TTTCCCTCTGCCCCGGCGGTTG 7 2 5 39 0.625 0.397940009 0 0.333333333 0.5 4 2 1 5 chr1:40042056-40042078 NA NA NA NA NA NA chr3 - 78970396 78970422 intron ROBO1 Ensembl G11046.1 CTAACATAATTAATTTATATCTATTT 4 4 4 40 1 0.602059991 0 0 0 4 0 0 4 chr3:78970396-78970422 minimal NA NA AUUUA UAUU minimal chr3 - 78983116 78983141 intron ROBO1 Ensembl G11047.1 CTTCATTAATTAAATTTATTTAAAT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr3:78983116-78983141 minimal NA NA AUUUA UAUU minimal chr1 - 40306751 40306773 3'utr TRIT1 Ensembl G1105.1 TTACAAATCTATATTTTTATTG 11 4 8 120 0.727272727 0.903089987 0 0.1 0.181818182 9 3 0 8 chr1:40306751-40306773 minimal NA NA NA UAUU minimal chr3 - 88101276 88101299 3'utr CGGBP1 Ensembl G11061.1 TATTAAAATTTTACTATTTCATT 5 2 5 56 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr3:88101276-88101299 NA NA NA NA UAUU minimal chr3 - 88102582 88102607 3'utr CGGBP1 Ensembl G11062.1 ATAATCACTTAAATTTTATATATCT 10 6 9 94 0.9 0.954242509 0 0.25 0.4 6 1 0 9 chr3:88102582-88102607 minimal NA NA NA NA NA chr1 - 40324405 40324430 intron TRIT1 Ensembl G1107.1 CTCTTATTTACATTATTTTTTATTT 6 3 4 96 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr1:40324405-40324430 minimal NA NA AUUUA UAUU minimal chr3 - 98234427 98234454 3'utr CLDND1 Ensembl G11075.1 AACTTTAAAAAACTTATTTATTTATTC 9 3 6 95 0.666666667 0.77815125 0 0.5 0.666666667 3 3 0 6 chr3:98234427-98234454 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 - 100083602 100083631 3'utr TOMM70A Ensembl G11078.1 ACTATTTTCTATAATAATTAGTACTATTT 48 5 46 479 0.958333333 1.662757832 0 0.461538462 0.854166667 7 2 0 46 chr3:100083602-100083631 NA NA NA NA UAUU minimal chr1 - 41692273 41692302 intron SCMH1 Ensembl G1108.1 AACATATATAATAAATAATATTAATATTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:41692273-41692302 NA NA NA NA UAUU minimal chr3 - 101369285 101369311 3'utr ZBTB11 Ensembl G11081.1 CTTATTAAAACCTTACTATACTATTT 10 3 7 90 0.7 0.84509804 0 0.25 0.4 6 3 0 7 chr3:101369285-101369311 minimal NA NA NA UAUU minimal chr3 - 101369448 101369475 3'utr ZBTB11 Ensembl G11083.1 ACTTACTATTTATTTTATCCCCTTTTA 22 7 19 232 0.863636364 1.278753601 0 0.5 0.681818182 7 3 0 19 chr3:101369448-101369475 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 108298222 108298246 coding KIAA1524 Ensembl G11092.1 ACTTTTCAACTAATATTTAATATT 5 2 3 53 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr3:108298222-108298246 minimal NA NA AUUUA UAUU minimal chr3 - 113163787 113163812 3'utr SPICE1 Ensembl G11101.1 ATCCATTTATTTATTTATTTTCCTG 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr3:113163787-113163812 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 - 113439131 113439156 3'utr NAA50 Ensembl G11104.1 TTTCATTCATATTTATCCTCTTATG 5 3 5 58 1 0.698970004 0 0.25 0.4 3 0 0 5 chr3:113439131-113439156 minimal NA NA AUUUA UAUU minimal chr3 - 114033638 114033661 NoAnnotation G11108.1 CTTCATTATACTATTATATTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:114033638-114033661 minimal NA NA NA UAUU minimal chr1 - 42644454 42644480 3'utr FOXJ3 Ensembl G1111.1 ACTATTATTATTTTTTTCTTTTTTTG 2 2 2 35 1 0.301029996 0 0 0 2 0 0 2 chr1:42644454-42644480 minimal NA NA NA UAUU minimal chr3 - 119545108 119545131 3'utr GSK3B Ensembl G11114.1 AAAATTAATCCATATCTTCGGGT 7 3 5 51 0.714285714 0.698970004 0 0.5 0.714285714 2 2 0 5 chr3:119545108-119545131 NA NA NA NA NA NA chr3 - 120043621 120043644 3'utr LRRC58 Ensembl G11117.1 TTTATTATATTAATATCAAATTT 4 2 2 48 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr3:120043621-120043644 minimal NA NA NA UAUU minimal chr3 - 120047257 120047279 3'utr LRRC58 Ensembl G11120.1 CATAACATTAATATATTTAGAA 3 2 3 21 1 0.477121255 0 0 0 3 0 0 3 chr3:120047257-120047279 minimal NA NA AUUUA UAUU minimal chr3 - 120048455 120048485 3'utr LRRC58 Ensembl G11121.1 TTTTTTTCATATATATTTTTTATTTTAGAA 5 4 5 89 1 0.698970004 0 0 0 5 0 0 5 chr3:120048455-120048485 minimal NA NA NA UAUU minimal chr3 - 120115058 120115081 3'utr FSTL1 Ensembl G11125.1 TTTTTTAATATTTTATTTTCTTG 4 3 4 64 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr3:120115058-120115081 minimal NA NA NA UAUU minimal chr3 - 120115081 120115115 3'utr FSTL1 Ensembl G11126.1 ACTTTATTCTTCAATTATTATCATTATATTATTG 45 13 38 542 0.826086957 1.278753601 0 0.266666667 0.52173913 22 7 1 38 chr3:120115081-120115115 minimal NA NA NA UAUU minimal chr3 - 121119724 121119756 NoAnnotation G11129.1 TTAACTTTTTTTATTATTCATAATATTCTATA 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr3:121119724-121119756 minimal NA NA NA UAUU minimal chr3 - 121156642 121156675 intron POLQ Ensembl G11130.1 TATACTCTTATATAAATATACCATAATTTATCT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr3:121156642-121156675 minimal NA NA AUUUA NA minimal chr3 - 121432639 121432666 intron GOLGB1 Ensembl G11135.1 ACTATATTTTAATATTTATTTATAATT 5 5 5 67 1 0.698970004 0 0 0 5 0 0 5 chr3:121432639-121432666 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 121529443 121529475 intron IQCB1 Ensembl G11137.1 CATTAATAATTCTTTTTCCTTATATATTATTA 12 6 10 162 0.833333333 1 0 0.2 0.333333333 8 2 0 10 chr3:121529443-121529475 minimal NA NA NA UAUU minimal chr3 - 121529477 121529504 intron IQCB1 Ensembl G11138.1 CACCTTTATTTAATATTCCTATTTAAG 12 5 12 132 1 1.079181246 0 0.571428571 0.75 3 0 0 12 chr3:121529477-121529504 minimal NA NA AUUUA UAUU minimal chr3 - 124947289 124947316 3'utr ZNF148 Ensembl G11147.1 TTATTAATTATCCTTATTTCATTTAAT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr3:124947289-124947316 minimal NA NA AUUUA UAUU minimal chr3 - 124949479 124949506 3'utr ZNF148 Ensembl G11148.1 TTATCCATTTAAATTATTTTTTCTTTT 9 4 7 123 0.7 0.544068044 0 0.428571429 0.6 4 2 1 7 chr3:124949479-124949506 minimal NA NA AUUUA UAUU minimal chr3 - 128888536 128888556 3'utr CNBP Ensembl G11156.1 TATACTATATCACTTAGACA 16 2 14 98 0.875 1.146128036 0 0.25 0.8125 3 2 0 14 chr3:128888536-128888556 NA NA NA NA NA NA chr3 - 128888904 128888934 3'utr CNBP Ensembl G11157.1 AACTTCCATAAATAACTTTAATTTTAGTAT 7 3 6 75 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr3:128888904-128888934 NA NA NA NA NA NA chr3 - 132258581 132258607 NoAnnotation G11165.1 TATTCACAATACTTATATTCTTAGTA 5 2 5 55 1 0.698970004 0 1 1 0 0 0 5 chr3:132258581-132258607 minimal NA NA NA UAUU minimal chr3 - 135869068 135869094 3'utr MSL2 Ensembl G11174.1 ACTTATTTTCTCTAATAGTTTATTTG 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr3:135869068-135869094 minimal NA NA NA UAUU minimal chr3 - 135869158 135869178 3'utr MSL2 Ensembl G11175.1 ATTTACTTAAAATAATTTTG 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:135869158-135869178 minimal NA NA AUUUA NA minimal chr3 - 136397172 136397193 intron STAG1 Ensembl G11178.1 TACTATTTTATTTATATATTG 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr3:136397172-136397193 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 45442341 45442365 intron EIF2B3 Ensembl G1119.1 AATATACTACTATTTATTTATCTA 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:45442341-45442365 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 149235764 149235788 3'utr WWTR1 Ensembl G11196.1 CTATTTATACTATATTTCTTATTA 12 3 11 150 0.846153846 0.740362689 0 0.125 0.461538462 7 1 1 11 chr3:149235764-149235788 minimal NA NA AUUUA UAUU minimal chr1 + 35848829 35848851 intron ZMYM4 Ensembl G112.1 CTATATATATTTCTAATTTTTA 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:35848829-35848851 NA NA NA NA UAUU minimal chr1 - 45465342 45465365 NoAnnotation G1120.1 TCTTCATTATATTTTTCTTATTG 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:45465342-45465365 minimal NA NA NA UAUU minimal chr3 - 149236896 149236920 3'utr WWTR1 Ensembl G11200.1 AACTAATATTATTTATAATCTATG 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr3:149236896-149236920 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 149237207 149237228 3'utr WWTR1 Ensembl G11201.1 TTTAAAATAATTCTATCTATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr3:149237207-149237228 NA NA NA NA NA NA chr3 - 153990520 153990543 3'utr DHX36 Ensembl G11205.1 TATACTTATATATTTTTAATATG 5 2 5 60 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr3:153990520-153990543 minimal NA NA NA UAUU minimal chr3 - 153992759 153992781 3'utr DHX36 Ensembl G11207.1 TCTAACAATCTATTATATTACA 4 2 2 29 0.5 0.301029996 0 0 0 4 2 0 2 chr3:153992759-153992781 minimal NA NA NA UAUU minimal chr3 - 156260642 156260670 3'utr SSR3 Ensembl G11215.1 TTATTATTTATTATATAATAGTAGTAGG 7 3 7 83 0.875 0.544068044 0 0.333333333 0.5 4 0 1 7 chr3:156260642-156260670 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr3 - 156865552 156865581 3'utr CCNL1 Ensembl G11217.1 CTTCAAATACCTTATTTAAATAAATTATT 9 4 6 92 0.666666667 0.77815125 0 0.125 0.222222222 7 3 0 6 chr3:156865552-156865581 minimal NA NA AUUUA UAUU minimal chr3 - 159976087 159976139 3'utr IFT80 Ensembl G11221.1 TATTTCTATCTTTTATATTTTTTAGTCCAATAATTAGCAAAATATTACTATG 13 3 13 172 1 1.113943352 0 0.333333333 0.692307692 4 0 0 13 chr3:159976087-159976139 minimal NA NA NA UAUU minimal chr3 - 160153934 160153957 3'utr TRIM59 Ensembl G11224.1 TATTATATCAATTTATTATTAGA 6 2 6 66 1 0.77815125 0 0.666666667 0.833333333 1 0 0 6 chr3:160153934-160153957 minimal NA NA AUUUA UAUU minimal chr3 - 160219042 160219064 3'utr KPNA4 Ensembl G11226.1 TTTTATTTACTTTACCTAGTAT 5 2 5 56 1 0.698970004 0 0.5 0.8 1 0 0 5 chr3:160219042-160219064 minimal NA NA AUUUA UAUU minimal chr3 - 167405113 167405137 intron PDCD10 Ensembl G11236.1 TACTTTATTTCTTATTATATTTTG 3 2 2 31 1 0.477121255 0 0 0 3 0 0 3 chr3:167405113-167405137 minimal NA NA NA UAUU minimal chr3 - 169805416 169805444 intron PHC3 Ensembl G11243.1 TTTATATTACAATAATATATTGTAGATC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:169805416-169805444 minimal NA NA NA UAUU minimal chr1 - 47098553 47098582 repeat LINE-L2a RepeatMasker G1125.1 CAAACTCCAAATACATTATATTTATTTAT 9 4 5 84 0.454545455 0.22184875 0 0.222222222 0.363636364 7 4 2 5 chr1:47098553-47098582 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 178740432 178740455 3'utr ZMAT3 Ensembl G11265.1 TATAATAACCCTTTTATTATTAT 7 4 5 74 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr3:178740432-178740455 minimal NA NA NA UAUU minimal chr3 - 178740880 178740907 3'utr ZMAT3 Ensembl G11266.1 AATATTCATTAACTACATTTTATCTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr3:178740880-178740907 minimal NA NA NA UAUU minimal chr3 - 185208047 185208071 3'utr TMEM41A Ensembl G11280.1 TATCTTTTAATTTATCTTTTAATT 6 2 5 80 0.833333333 0.698970004 0 0.25 0.5 3 1 0 5 chr3:185208047-185208071 minimal NA NA AUUUA NA minimal chr3 - 185651106 185651137 intron TRA2B Ensembl G11284.1 AATTAAATCTAATATTTATAATAATTTAGTA 9 2 6 95 0.666666667 0.77815125 0 0.5 0.666666667 3 3 0 6 chr3:185651106-185651137 minimal NA NA AUUUA UAUU minimal chr3 - 185764595 185764623 3'utr ETV5 Ensembl G11285.1 ACTCTTTCTAAACCATATTTATAGCTTT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr3:185764595-185764623 minimal NA NA AUUUA UAUU minimal chr1 - 49853103 49853126 intron AGBL4 Ensembl G1129.1 TTTTTTTTTTAAATCATCTAATG 5 2 3 65 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr1:49853103-49853126 NA NA NA NA NA NA chr3 - 192515413 192515438 3'utr MB21D2 Ensembl G11291.1 AACATACCATTATAATTATTATTTG 14 5 12 131 0.857142857 1.079181246 0 0.4 0.571428571 6 2 0 12 chr3:192515413-192515438 minimal NA NA NA UAUU minimal chr3 - 192515772 192515798 3'utr MB21D2 Ensembl G11292.1 ATTCTATCCTATTATTTTTATTATTT 6 4 6 70 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr3:192515772-192515798 minimal NA NA NA UAUU minimal chr3 - 194151561 194151590 intron ATP13A3 Ensembl G11298.1 TTTCTTATACTAATATTTCATATTTATAT 5 4 5 63 1 0.698970004 0 0 0 5 0 0 5 chr3:194151561-194151590 minimal NA NA AUUUA UAUU minimal chr1 - 50965689 50965716 intron FAF1 Ensembl G1130.1 ACTTATTTATCTCTCCATTTATTTATG 4 2 4 53 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:50965689-50965716 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 195777045 195777070 3'utr TFRC Ensembl G11302.1 TCATTTTAACTTTATCACATTATTT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr3:195777045-195777070 minimal NA NA NA UAUU minimal chr3 - 195777931 195777957 3'utr TFRC Ensembl G11303.1 TCCTTTTGGCACTGAGATATTTATTG 7 3 4 78 0.571428571 0.602059991 0 0 0 7 3 0 4 chr3:195777931-195777957 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr3 - 196079909 196079929 3'utr UBXN7 Ensembl G11306.1 CCTATACATTTTTATTTATG 18 5 17 181 0.944444444 1.230448921 0 0.833333333 0.944444444 1 1 0 17 chr3:196079909-196079929 UUAUUUAU NA NA AUUUA UAUU minimal chr3 - 196433508 196433531 3'utr CEP19 Ensembl G11308.1 TTATATCTTTATATTATTTATCT 7 5 7 93 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr3:196433508-196433531 UUAUUUAU NA NA AUUUA UAUU minimal chr4 + 127172 127196 lincRNA ZNF718 Ensembl G11315.1 CTCTCAATTATTACCTTATTTCTT 5 4 5 53 1 0.698970004 0 0.25 0.4 3 0 0 5 chr4:127172-127196 minimal NA NA NA UAUU minimal chr4 + 131722 131747 lincRNA ZNF718 Ensembl G11317.1 CTTCTTACATTTAAATATTTAATTT 11 5 7 135 0.583333333 0.544068044 0 0.1 0.25 9 4 1 7 chr4:131722-131747 minimal NA NA AUUUA UAUU minimal chr4 + 152188 152208 lincRNA ZNF718 Ensembl G11321.1 CTTACTAATATTATTTTATT 3 2 3 33 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr4:152188-152208 minimal NA NA NA UAUU minimal chr4 + 167102 167122 NoAnnotation G11322.1 TTAATACAAATTTATTTATT 4 2 2 42 0.5 0.301029996 0.25 0.333333333 0.5 2 2 0 2 chr4:167102-167122 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 574074 574096 lincRNA AC116565.1 Ensembl G11323.1 TAAACCTTATTTTAATATTTAC 2 2 2 20 0.666666667 0 0 0 0 3 0 1 2 chr4:574074-574096 minimal NA NA AUUUA UAUU minimal chr4 + 1245514 1245538 NoAnnotation G11325.1 ACTATTTTATTCAACTCGGGTATT 23 6 17 198 0.739130435 1.230448921 0.304347826 0.5 0.739130435 6 6 0 17 chr4:1245514-1245538 minimal NA NA NA UAUU minimal chr1 - 51071548 51071571 intron FAF1 Ensembl G1133.1 ATATAATAACTTAATATTTATTG 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:51071548-51071571 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 4323463 4323487 3'utr ZBTB49 Ensembl G11331.1 AAACTCATACCATAATTTAATTCG 4 2 4 27 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr4:4323463-4323487 minimal NA NA AUUUA NA minimal chr4 + 6719128 6719150 repeat Low_complexity-AT_rich RepeatMasker G11336.1 TACATTATTTAATATTATATTA 7 4 7 74 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr4:6719128-6719150 minimal NA NA AUUUA UAUU minimal chr4 + 6884100 6884122 3'utr KIAA0232 Ensembl G11338.1 TAAACACACATATAATTTATTA 4 2 4 27 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:6884100-6884122 minimal NA NA AUUUA UAUU minimal chr4 + 6884769 6884791 3'utr KIAA0232 Ensembl G11339.1 ATTCACAAATTATGTATTTATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr4:6884769-6884791 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 7034738 7034767 3'utr TBC1D14 Ensembl G11340.1 TACAGTTAACCTTTAATTTTATTTAGTAA 10 3 10 116 1 1 0 0.428571429 0.6 4 0 0 10 chr4:7034738-7034767 minimal NA NA AUUUA UAUU minimal chr4 + 15010117 15010139 intron CPEB2 Ensembl G11346.1 ATTTATTATTTACTTTCTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:15010117-15010139 minimal NA NA AUUUA UAUU minimal chr4 + 15070621 15070645 3'utr CPEB2 Ensembl G11348.1 ATCATATTTATTTTACTATTTTTG 5 2 4 70 0.8 0.602059991 0.8 0.333333333 0.6 2 1 0 4 chr4:15070621-15070645 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 17845742 17845764 3'utr NCAPG Ensembl G11352.1 CATAACAAAATAATATTTATTT 9 3 3 75 0.333333333 0.477121255 0 0.4 0.666666667 3 6 0 3 chr4:17845742-17845764 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 20258703 20258724 intron SLIT2 Ensembl G11353.1 AAATTAACTAAAATATTTAAG 5 3 5 30 1 0.698970004 1 0.333333333 0.6 2 0 0 5 chr4:20258703-20258724 minimal NA NA AUUUA UAUU minimal chr4 + 20260016 20260036 repeat Low_complexity-AT_rich RepeatMasker G11354.1 ATTTACTTTTTTATATTTAG 3 2 3 36 0.75 0.176091259 1 0.333333333 0.5 2 0 1 3 chr4:20260016-20260036 minimal NA NA AUUUA UAUU minimal chr4 + 20284120 20284148 repeat Low_complexity-AT_rich RepeatMasker G11355.1 TAATACCTTTTATTTATTACTATACTAA 8 5 7 90 0.875 0.84509804 0 0 0 8 1 0 7 chr4:20284120-20284148 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 20317505 20317532 intron SLIT2 Ensembl G11356.1 ACTTATTACATATTAATTCATATTTAT 3 2 2 35 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr4:20317505-20317532 minimal NA NA AUUUA UAUU minimal chr4 + 20494407 20494433 intron SLIT2 Ensembl G11360.1 CTCATTTTTAACCAATTTATTTAATT 4 3 4 51 1 0.602059991 0 0 0 4 0 0 4 chr4:20494407-20494433 minimal NA NA AUUUA UAUU minimal chr4 + 20621465 20621486 repeat Low_complexity-AT_rich RepeatMasker G11364.1 CTTTAATATATATTAATTTAT 5 3 4 56 0.8 0.602059991 0 0 0 5 1 0 4 chr4:20621465-20621486 minimal NA NA AUUUA UAUU minimal chr4 + 20729714 20729735 3'utr PACRGL Ensembl G11365.1 AATACACTACTAATATTATTT 5 3 5 39 1 0.698970004 0.4 0.25 0.4 3 0 0 5 chr4:20729714-20729735 minimal NA NA NA UAUU minimal chr4 + 25393719 25393741 intron ANAPC4 Ensembl G11373.1 TTATATTACATTTATTCTATCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr4:25393719-25393741 minimal NA NA AUUUA UAUU minimal chr1 - 52292052 52292079 intron NRD1 Ensembl G1138.1 ATATTTATACTCTATTTTTATCAGTTG 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:52292052-52292079 minimal NA NA AUUUA UAUU minimal chr4 + 30728779 30728804 intron PCDH7 Ensembl G11384.1 ATTTCATTTTACATTCATTTTATTT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr4:30728779-30728804 minimal NA NA NA UAUU minimal chr4 + 30733266 30733292 3'utr PCDH7 Ensembl G11386.1 TCCATATTTATTAAACATCCTATTTG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr4:30733266-30733292 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 30815691 30815711 intron PCDH7 Ensembl G11390.1 CATTATAATATCATAATTTA 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr4:30815691-30815711 minimal NA NA AUUUA NA minimal chr4 + 39702755 39702782 repeat Low_complexity-AT_rich RepeatMasker G11398.1 TTTCTTTTTATTAATTAATATTTATTT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr4:39702755-39702782 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 39722032 39722056 intron UBE2K Ensembl G11399.1 TAACTTTACATTTTTTATTTATTC 3 2 3 42 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr4:39722032-39722056 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 52934708 52934731 intron ZCCHC11 Ensembl G1140.1 AATTACATTAATTTTATTTAACT 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:52934708-52934731 minimal NA NA AUUUA UAUU minimal chr4 + 39760852 39760876 intron UBE2K Ensembl G11400.1 ATATACCTTTATTAATATTTAACT 5 3 4 55 0.8 0.602059991 0 0 0 5 1 0 4 chr4:39760852-39760876 minimal NA NA AUUUA UAUU minimal chr4 + 41266313 41266347 intron UCHL1 Ensembl G11407.1 ATCCTCTTAGTAACTCTATCTACCTTATTTTATT 9 5 9 91 0.818181818 0.477121255 0.090909091 0.1 0.181818182 9 0 2 9 chr4:41266313-41266347 minimal NA NA NA UAUU minimal chr1 - 52940265 52940286 intron ZCCHC11 Ensembl G1141.1 TTCCTTTACTTTCTCATATAT 4 2 3 44 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:52940265-52940286 NA NA NA NA NA NA chr4 + 41959219 41959240 3'utr TMEM33 Ensembl G11413.1 TACCTTACTAATTTAAACTCT 2 2 2 16 0.666666667 0 0 0 0 3 0 1 2 chr4:41959219-41959240 minimal NA NA AUUUA NA minimal chr4 + 41965849 41965874 NoAnnotation G11414.1 CTAATAATTTTTTCCATTATATTTA 5 3 4 63 0.8 0.602059991 0.4 0 0 5 1 0 4 chr4:41965849-41965874 minimal NA NA AUUUA UAUU minimal chr4 + 42003934 42003959 intron SLC30A9 Ensembl G11415.1 CACTTATTTAATTTCTTTATTTTTT 3 2 3 48 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:42003934-42003959 minimal NA NA AUUUA UAUU minimal chr4 + 48861147 48861172 intron OCIAD1 Ensembl G11432.1 CTAATTTTATTTTTAATCATTAGCG 5 2 5 60 1 0.698970004 1 0.5 0.8 1 0 0 5 chr4:48861147-48861172 minimal NA NA NA UAUU minimal chr4 + 52770787 52770812 intron DCUN1D4 Ensembl G11433.1 CTTACCTTATTTATTTTCTTTTTCT 3 2 3 48 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:52770787-52770812 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 54288004 54288027 intron FIP1L1 Ensembl G11438.1 CATCTATACATATCTATTTATTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr4:54288004-54288027 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 56897755 56897778 3'utr CEP135 Ensembl G11443.1 TATCTATATTTTTATTATTCATG 3 2 3 38 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr4:56897755-56897778 minimal NA NA NA UAUU minimal chr4 + 56897979 56898002 3'utr CEP135 Ensembl G11444.1 CTTAACTTTTTCTTCTTAAAATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:56897979-56898002 NA NA NA NA NA NA chr1 - 53152954 53152977 3'utr SELRC1 Ensembl G1145.1 TCATCATTTTCATCATTATTATT 4 2 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr1:53152954-53152977 minimal NA NA NA UAUU minimal chr4 + 57799029 57799051 3'utr REST Ensembl G11455.1 TAACACTTTATACATATATATA 6 3 4 50 0.666666667 0.602059991 0.333333333 0.2 0.333333333 4 2 0 4 chr4:57799029-57799051 minimal NA NA NA NA NA chr4 + 57799211 57799232 3'utr REST Ensembl G11456.1 ATTTTTACATCTTATATCTAT 4 4 4 44 1 0.602059991 0.5 0 0 4 0 0 4 chr4:57799211-57799232 minimal NA NA NA NA NA chr4 + 57799238 57799268 3'utr REST Ensembl G11457.1 ATCTGTATTTCATATAACTTATTTATTTCG 5 4 5 63 1 0.698970004 0.6 0 0 5 0 0 5 chr4:57799238-57799268 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 71556198 71556226 3'utr UTP3 Ensembl G11472.1 TATTTTATTTACCTAACTATAATTATTG 6 3 3 81 0.428571429 0.176091259 0.285714286 0 0 7 3 1 3 chr4:71556198-71556226 minimal NA NA AUUUA UAUU minimal chr4 + 71852127 71852150 3'utr MOBKL1A Ensembl G11474.1 TATAACCTTTTCATATATTTATA 5 2 5 51 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr4:71852127-71852150 minimal NA NA AUUUA UAUU minimal chr4 + 71852970 71853003 repeat Low_complexity-AT_rich RepeatMasker G11476.1 TTAAAATTTCAATATTTAATTTCTCTATATATT 6 3 6 70 1 0.77815125 0 0.25 0.5 3 0 0 6 chr4:71852970-71853003 minimal NA NA AUUUA UAUU minimal chr4 + 71896061 71896083 3'utr DCK Ensembl G11478.1 TATTAAACCTTTCCATTTTACG 5 2 5 44 1 0.698970004 0.4 0.25 0.4 3 0 0 5 chr4:71896061-71896083 NA NA NA NA UAUU minimal chr4 + 71896434 71896456 repeat Low_complexity-AT_rich RepeatMasker G11479.1 AATTAAAATTTATTCTACTTTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr4:71896434-71896456 minimal NA NA AUUUA UAUU minimal chr1 - 53692643 53692665 3'utr MAGOH Ensembl G1148.1 TATATCAGGGCAGTATTTTTTT 7 5 5 68 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr1:53692643-53692665 NA NA NA NA UAUU minimal chr4 + 71896593 71896616 repeat Low_complexity-AT_rich RepeatMasker G11480.1 CTAATAAAAATTTATTATTTATT 9 3 9 96 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr4:71896593-71896616 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 74608816 74608840 3'utr IL8 Ensembl G11484.1 TAACTTATTAACCTATTTATTATT 12 8 12 126 1 1.079181246 0 0.333333333 0.5 6 0 0 12 chr4:74608816-74608840 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 + 74736392 74736421 3'utr CXCL1 Ensembl G11486.1 TCTTCTATTTATTTATTTATTCATTAGTT 5 3 4 80 0.8 0.602059991 0.2 0.25 0.4 3 1 0 4 chr4:74736392-74736421 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 76807186 76807217 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G11493.1 TGAGACAGGTTAGTTTTACCCTACTGATGAT 1195 11 45 10481 0.017254601 -1.497236896 0.75958589 0.436440678 0.949003067 133 1150 1413 45 chr4:76807186-76807217 NA NA NA NA NA NA chr1 - 54497597 54497618 3'utr TMEM59 Ensembl G1150.1 ATTATTATTTTACTAATATCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:54497597-54497618 minimal NA NA NA UAUU minimal chr4 + 81208276 81208299 repeat Low_complexity-AT_rich RepeatMasker G11507.1 CATATTTTCTTACTTTTATTATT 5 3 5 70 1 0.698970004 0 0.25 0.4 3 0 0 5 chr4:81208276-81208299 minimal NA NA NA UAUU minimal chr4 + 84005869 84005893 NoAnnotation G11509.1 CTAAATTTAATTTTTTTAATTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:84005869-84005893 minimal NA NA AUUUA UAUU minimal chr4 + 84382361 84382383 3'utr MRPS18C Ensembl G11512.1 TTACCACTAATAAACTTATTTT 12 2 10 94 0.769230769 0.698970004 0.076923077 0.5 0.692307692 4 2 1 10 chr4:84382361-84382383 minimal NA NA NA UAUU minimal chr4 + 88061600 88061630 repeat Simple_repeat-(TTATA)n RepeatMasker G11520.1 CCTTTTTTTTATTTATTACCATTATATATT 4 2 3 69 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr4:88061600-88061630 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 95147702 95147722 intron SMARCAD1 Ensembl G11530.1 ATACTTAATTTCCTTATTAT 3 2 3 30 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr4:95147702-95147722 minimal NA NA NA UAUU minimal chr4 + 95211814 95211837 3'utr SMARCAD1 Ensembl G11533.1 ATATTTAACTCTTTATTAAATCT 9 3 9 95 1 0.954242509 0 0.4 0.666666667 3 0 0 9 chr4:95211814-95211837 minimal NA NA AUUUA UAUU minimal chr4 + 95451604 95451624 intron PDLIM5 Ensembl G11534.1 ACTATATATTTTTATTCTTA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr4:95451604-95451624 minimal NA NA NA UAUU minimal chr4 + 96472439 96472464 NoAnnotation G11538.1 ATTATTATTATACTTTATATTTATA 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr4:96472439-96472464 minimal NA NA AUUUA UAUU minimal chr4 + 99957937 99957961 intron METAP1 Ensembl G11546.1 ACTGCAGTAACTACTCTTATATTT 3 2 3 25 1 0.477121255 0 0 0 3 0 0 3 chr4:99957937-99957961 minimal NA NA NA UAUU minimal chr4 + 99959585 99959609 intron METAP1 Ensembl G11547.1 ATTATTTACTTTTACTTTATTTAT 3 3 3 45 1 0.477121255 0.333333333 0 0 3 0 0 3 chr4:99959585-99959609 UUAUUUAU NA NA AUUUA UAUU minimal chr4 + 106198187 106198207 3'utr TET2 Ensembl G11556.1 TAATCTTAACTTTTATTTAT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:106198187-106198207 UUAUUUAU NA NA AUUUA UAUU minimal chr4 + 106200923 106200952 repeat Low_complexity-AT_rich RepeatMasker G11557.1 TTTTTAATAAAATTTATATTTATTTAATG 5 4 4 71 0.8 0.602059991 0.2 0 0 5 1 0 4 chr4:106200923-106200952 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 55631912 55631937 intron USP24 Ensembl G1156.1 CTTAAATTATTAATATATAATATTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr1:55631912-55631937 minimal NA NA NA UAUU minimal chr4 + 108835549 108835575 3'utr SGMS2 Ensembl G11568.1 CCAAGTTAGAATTCATTATTTAATTT 15 2 14 137 1 1.176091259 0 0.444444444 0.666666667 5 0 0 15 chr4:108835549-108835575 minimal NA NA AUUUA UAUU minimal chr4 + 113578649 113578671 3'utr LARP7 Ensembl G11580.1 TATACCACAATTTTTCTTAAAC 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:113578649-113578671 NA NA NA NA NA NA chr1 - 59121253 59121280 repeat LINE-L4 RepeatMasker G1159.1 CTTTCTCTATTTTCTTTTTTATTTAAC 8 4 8 134 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr1:59121253-59121280 minimal NA NA AUUUA UAUU minimal chr4 + 120216447 120216470 3'utr USP53 Ensembl G11591.1 ATACATATATACTAATCATTTTA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:120216447-120216470 NA NA NA NA NA NA chr1 - 59143582 59143604 repeat SINE-MIRb RepeatMasker G1160.1 AATACCTAAATTTATAATATCT 4 3 4 29 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:59143582-59143604 minimal NA NA AUUUA NA minimal chr1 - 59246850 59246871 3'utr JUN Ensembl G1162.1 TTCTCTATTAGACTTTAGAAA 3 2 3 24 1 0.477121255 0 0 0 3 0 0 3 chr1:59246850-59246871 NA NA NA NA UAUU minimal chr4 + 131908308 131908330 NoAnnotation G11620.1 TCACTTTTATTTCTAATTATTT 8 5 6 99 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr4:131908308-131908330 minimal NA NA NA UAUU minimal chr4 + 139968708 139968733 NoAnnotation G11628.1 CCTCTTCCAAACAAAATAACTTATT 3 2 3 20 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:139968708-139968733 minimal NA NA NA UAUU minimal chr4 + 140286178 140286204 intron NAA15 Ensembl G11631.1 ATAAATTTTAATATTTATTTATTTAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr4:140286178-140286204 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 140311586 140311607 3'utr NAA15 Ensembl G11634.1 CCTCATTCATCCTATTAATTT 4 2 4 36 1 0.602059991 0 0.5 0.75 1 0 0 4 chr4:140311586-140311607 NA NA NA NA UAUU minimal chr4 + 140394276 140394308 coding RAB33B Ensembl G11636.1 CTAAATAACAGTCTTTATTATATTATCTAATT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr4:140394276-140394308 minimal NA NA NA UAUU minimal chr4 + 140395910 140395931 3'utr RAB33B Ensembl G11638.1 CTTACATATTAAACTATTTAC 8 4 8 64 1 0.903089987 0.5 0.75 0.875 1 0 0 8 chr4:140395910-140395931 minimal NA NA AUUUA UAUU minimal chr4 + 140396754 140396778 3'utr RAB33B Ensembl G11639.1 CTATCTAACAACTAATTACTAATT 3 2 3 22 1 0.477121255 0 0 0 3 0 0 3 chr4:140396754-140396778 NA NA NA NA NA NA chr1 - 59247077 59247099 3'utr JUN Ensembl G1164.1 AGCACTCTGAGTTTACCATTTG 4 4 4 26 1 0.602059991 0 0 0 4 0 0 4 chr1:59247077-59247099 NA NA NA NA NA NA chr4 + 142146559 142146586 intron ZNF330 Ensembl G11643.1 ATTTCTATTATATATTTATATGTTAGA 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:142146559-142146586 minimal NA NA AUUUA UAUU minimal chr4 + 144141673 144141700 3'utr USP38 Ensembl G11645.1 ACTATAACAAATATCTATCTTTTATTT 8 3 7 90 0.777777778 0.544068044 0 0.142857143 0.333333333 6 1 1 7 chr4:144141673-144141700 minimal NA NA NA UAUU minimal chr1 - 59247204 59247233 3'utr JUN Ensembl G1165.1 TATGTACATATATATATTTTTTAATTTGA 51 9 42 660 0.843137255 1.633468456 0 0.44 0.725490196 14 8 0 43 chr1:59247204-59247233 NA NA NA NA UAUU minimal chr4 + 146479532 146479556 NoAnnotation G11651.1 TTTTCATAATATTTTAAAACTATT 3 2 2 35 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:146479532-146479556 NA NA NA NA UAUU minimal chr4 + 146574527 146574547 intron MMAA Ensembl G11652.1 CATCCTTTATTTCTAATATT 23 4 6 247 0.260869565 0.77815125 0 0.6 0.913043478 2 17 0 6 chr4:146574527-146574547 minimal NA NA NA UAUU minimal chr4 + 152062801 152062826 repeat Low_complexity-AT_rich RepeatMasker G11660.1 TTAAACAAATTAATTATTATTTATA 18 6 15 192 0.833333333 1.176091259 0 0.214285714 0.388888889 11 3 0 15 chr4:152062801-152062826 UUAUUUAU NA NA AUUUA UAUU minimal chr4 + 160221711 160221738 intron RAPGEF2 Ensembl G11675.1 TTACTTTTTCATTTAATTAACTTAATT 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr4:160221711-160221738 minimal NA NA AUUUA NA minimal chr4 + 160280834 160280854 3'utr RAPGEF2 Ensembl G11677.1 CTTTATTTAATAATTCTCTT 4 2 4 44 1 0.602059991 0 1 1 0 0 0 4 chr4:160280834-160280854 minimal NA NA AUUUA UAUU minimal chr4 + 166263495 166263521 3'utr SC4MOL Ensembl G11687.1 CCTTATATTTAACTTTTTTTTTATTT 13 5 13 199 1 1.113943352 0 0.181818182 0.307692308 9 0 0 13 chr4:166263495-166263521 minimal NA NA AUUUA UAUU minimal chr4 + 166418781 166418806 3'utr CPE Ensembl G11688.1 CTTTAAATCTATCTATATAATGTAG 4 2 4 38 1 0.602059991 0.75 0 0 4 0 0 4 chr4:166418781-166418806 NA NA NA NA NA NA chr4 + 175239749 175239770 repeat Low_complexity-AT_rich RepeatMasker G11698.1 AAAATTAGTATTTTTTTTAAT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr4:175239749-175239770 NA NA NA NA UAUU minimal chr4 + 181012175 181012195 NoAnnotation G11709.1 TATACTCTAATTTATTTATT 2 2 2 20 1 0.301029996 0.5 0 0 2 0 0 2 chr4:181012175-181012195 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 184238784 184238809 3'utr WWC2 Ensembl G11715.1 ATTTTATTTTCTTCATTTATTTATT 7 2 5 119 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr4:184238784-184238809 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 + 184433130 184433153 NoAnnotation G11719.1 TTTTCACATTTAATTAACTTATT 5 2 3 54 0.6 0.477121255 0 0 0 5 2 0 3 chr4:184433130-184433153 minimal NA NA AUUUA UAUU minimal chr4 - 432279 432307 intron ZNF721 Ensembl G11728.1 TTATTTATAATTTATCAATACAACATTC 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr4:432279-432307 UUAUUUAU NA NA AUUUA UAUU minimal chr4 - 458394 458422 intron ZNF721 Ensembl G11731.1 TTTTACTCCCTTCAACACACTATTTATG 4 3 4 41 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:458394-458422 minimal NA NA AUUUA UAUU minimal chr4 - 1717684 1717711 3'utr TMEM129 Ensembl G11734.1 ACACCATATTTAATAAAATTTAGTCTG 46 2 45 386 0.97826087 1.653212514 0 0.6 0.913043478 4 1 0 45 chr4:1717684-1717711 minimal NA NA AUUUA UAUU minimal chr4 - 1814774 1814794 3'utr LETM1 Ensembl G11735.1 ATCCTTAACTAATATTTATG 8 3 7 65 0.875 0.84509804 0 0.5 0.75 2 1 0 7 chr4:1814774-1814794 minimal NA NA AUUUA UAUU minimal chr4 - 2743412 2743441 3'utr TNIP2 Ensembl G11738.1 CACACTTACTTTATTCACCTATTTTTATA 8 5 8 80 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr4:2743412-2743441 minimal NA NA NA UAUU minimal chr4 - 4270346 4270369 intron LYAR Ensembl G11740.1 TCTTAAATATTATTATTTATATT 4 3 4 49 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:4270346-4270369 UUAUUUAU NA NA AUUUA UAUU minimal chr4 - 7061810 7061834 3'utr GRPEL1 Ensembl G11743.1 TTTAATTTAAAATTTTTATTTAAG 3 2 3 38 1 0.477121255 0 0 0 3 0 0 3 chr4:7061810-7061834 minimal NA NA AUUUA UAUU minimal chr4 - 7061918 7061945 3'utr GRPEL1 Ensembl G11744.1 ACATATTTAAATCATATTCAACTAGTT 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:7061918-7061945 minimal NA NA AUUUA UAUU minimal chr4 - 17882454 17882477 3'utr LCORL Ensembl G11764.1 AATTATTTATTACAATATTTTCT 3 2 2 36 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:17882454-17882477 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 24530470 24530497 intron DHX15 Ensembl G11774.1 AATTAGCCCTCAACTATTTATTATTTA 3 2 3 28 1 0.477121255 0 0 0 3 0 0 3 chr4:24530470-24530497 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 24557036 24557062 intron DHX15 Ensembl G11778.1 TACTATCATTATTTATTAAATTTATT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr4:24557036-24557062 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 30578381 30578403 NoAnnotation G11784.1 TTTGGGATTGACTGGTGGGGAG 379 5 280 2270 0.518518519 0.237643017 0.011111111 0.548387097 0.974074074 14 99 161 280 chr4:30578381-30578403 NA NA NA NA NA NA chr1 - 67876133 67876160 3'utr SERBP1 Ensembl G1179.1 TTCCTTTACTCTTATTTTTTTAAATAA 5 3 3 42 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:67876133-67876160 minimal NA NA NA UAUU minimal chr4 - 39388297 39388322 NoAnnotation G11795.1 CATACACACACATTCATATTTATTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr4:39388297-39388322 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 39918886 39918909 intron PDS5A Ensembl G11799.1 TAATACCTAATTAAATTATTTAT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:39918886-39918909 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 36435120 36435144 intron EIF2C3 Ensembl G118.1 TATATTTTCTTTTACTCTATTTAT 3 2 3 45 0.75 0.176091259 0.75 0 0 4 0 1 3 chr1:36435120-36435144 minimal NA NA AUUUA UAUU minimal chr1 - 67877625 67877656 3'utr SERBP1 Ensembl G1181.1 TAATTATCTCTTCTCTCTTCCTCCATTAGAA 4 2 4 50 1 0.602059991 0 0 0 4 0 0 4 chr1:67877625-67877656 minimal NA NA NA NA NA chr4 - 46646933 46646953 NoAnnotation G11814.1 CTATTTTATTTTATCTAATT 4 2 2 50 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr4:46646933-46646953 minimal NA NA NA UAUU minimal chr4 - 57260170 57260203 3'utr PPAT Ensembl G11826.1 ATCCATTTAGAAATTTAATATTTATTAATAACT 28 7 27 322 0.931034483 1.130333768 0 0.1875 0.551724138 13 1 1 27 chr4:57260170-57260203 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 57260372 57260400 3'utr PPAT Ensembl G11827.1 TATCATCTTATAATCACTTTTTTCTACT 6 4 6 76 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr4:57260372-57260400 minimal NA NA NA NA NA chr4 - 57260603 57260635 3'utr PPAT Ensembl G11828.1 ATTCAAACAATCCCTTTATCCTTAATTTAATT 16 6 14 154 0.9375 1.176091259 0 0.071428571 0.1875 13 1 0 15 chr4:57260603-57260635 minimal NA NA AUUUA NA minimal chr4 - 57260966 57260988 3'utr PPAT Ensembl G11829.1 ATACTTATTAAATAATTAATAA 4 2 4 32 1 0.602059991 0 1 1 0 0 0 4 chr4:57260966-57260988 minimal NA NA NA UAUU minimal chr1 - 67890727 67890751 intron SERBP1 Ensembl G1183.1 TTTTTATTTTACTTTAATATTTTA 6 4 5 91 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:67890727-67890751 minimal NA NA NA UAUU minimal chr4 - 68320735 68320758 lincRNA RP11-584P21.2 Ensembl G11838.1 CTTACTTATTCAATTATTTATTT 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:68320735-68320758 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 68336913 68336938 NoAnnotation G11840.1 TTCTTTATTTCAATATTTATTCTTG 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:68336913-68336938 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 69179213 69179235 3'utr YTHDC1 Ensembl G11844.1 CTATCTAATTTTTAATCTTTTT 5 4 5 61 1 0.698970004 0 0.25 0.4 3 0 0 5 chr4:69179213-69179235 NA NA NA NA NA NA chr4 - 69184379 69184402 intron YTHDC1 Ensembl G11846.1 CATTTCATTTTATCTATTTAATG 5 2 4 58 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr4:69184379-69184402 minimal NA NA AUUUA UAUU minimal chr4 - 69187040 69187067 intron YTHDC1 Ensembl G11847.1 CTTTTAATTTTCTTAGTATTATTTATT 10 3 10 159 1 1 0 0.285714286 0.5 5 0 0 10 chr4:69187040-69187067 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 70296656 70296693 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G11849.1 AACTAGCCCTGAAAATGGATGGCGCTGGAGCGTTGGG 68 3 14 280 0.13592233 -0.410174465 0.048543689 0.327272727 0.640776699 37 54 35 14 chr4:70296656-70296693 NA NA NA NA NA NA chr4 - 70296705 70296732 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G11849.2 AATCCGCTAAGGAGTGTGTAACAACTC 78 2 3 376 0.015625 -1.583576586 0.067708333 0.43373494 0.755208333 47 75 114 3 chr4:70296705-70296732 NA NA NA NA NA NA chr4 - 73941413 73941436 3'utr ANKRD17 Ensembl G11854.1 TTTCCTTCATACATTAAACTATT 3 3 3 25 0.6 0 0 0.25 0.4 3 0 2 3 chr4:73941413-73941436 NA NA NA NA UAUU minimal chr4 - 74012444 74012470 intron ANKRD17 Ensembl G11856.1 TTACTTTTTAAATCTTAATATTTAAC 7 4 7 89 1 0.84509804 0 0.25 0.571428571 3 0 0 7 chr4:74012444-74012470 minimal NA NA AUUUA UAUU minimal chr1 - 68211446 68211469 intron GNG12 Ensembl G1186.1 ATTTCCACAAACATCTATTTATG 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr1:68211446-68211469 minimal NA NA AUUUA UAUU minimal chr4 - 74963213 74963237 3'utr CXCL2 Ensembl G11865.1 CACACTCTCCCATTATATTTATTG 3 2 3 25 0.75 0.176091259 0 0 0 4 0 1 3 chr4:74963213-74963237 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 76502763 76502786 NoAnnotation G11869.1 CTTATTTCAATACTATTTTTATG 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr4:76502763-76502786 minimal NA NA NA UAUU minimal chr4 - 76568566 76568588 3'utr G3BP2 Ensembl G11872.1 CCTTTATTAATACTACTTTTAA 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:76568566-76568588 minimal NA NA NA UAUU minimal chr4 - 76569696 76569718 3'utr G3BP2 Ensembl G11873.1 CCTTCTATTAATACATCATTCC 4 2 4 32 1 0.602059991 0 0.5 0.75 1 0 0 4 chr4:76569696-76569718 NA NA NA NA UAUU minimal chr4 - 77035956 77035981 3'utr NUP54 Ensembl G11876.1 TATTTTTATATTATTTTACTTATTT 6 4 6 93 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr4:77035956-77035981 minimal NA NA NA UAUU minimal chr4 - 83275801 83275834 intron HNRNPD Ensembl G11886.1 TCTTAATTTTATATTTTATTAATCTATTTTAAT 3 3 3 47 1 0.477121255 0 0 0 3 0 0 3 chr4:83275801-83275834 minimal NA NA NA UAUU minimal chr4 - 83276479 83276502 coding HNRNPD Ensembl G11887.1 CTACAAACCATACTAAATTATTC 3 2 2 19 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:83276479-83276502 minimal NA NA NA UAUU minimal chr4 - 83847159 83847181 3'utr LIN54 Ensembl G11891.1 ATTTTCAAAAATCTATCTATCT 5 3 5 43 1 0.698970004 0 0.25 0.4 3 0 0 5 chr4:83847159-83847181 NA NA NA NA NA NA chr4 - 83862247 83862276 intron LIN54 Ensembl G11892.1 TATCTTCTTTAATAATATTTATCTTATTT 2 2 2 33 0.666666667 0 0 0 0 3 0 1 2 chr4:83862247-83862276 minimal NA NA AUUUA UAUU minimal chr4 - 85413244 85413271 3'utr NKX6-1 Ensembl G11895.1 CATCTTTAACCTTTATTAATTTATATA 8 5 8 84 0.888888889 0.602059991 0 0.285714286 0.444444444 5 0 1 8 chr4:85413244-85413271 minimal NA NA AUUUA UAUU minimal chr1 - 68942113 68942141 3'utr DEPDC1 Ensembl G1190.1 CACTCTTTTATATATTCTTTTTCCACTT 19 6 17 247 0.894736842 1.230448921 0 0.454545455 0.684210526 6 2 0 17 chr1:68942113-68942141 minimal NA NA NA UAUU minimal chr4 - 89183455 89183475 3'utr PPM1K Ensembl G11901.1 TCACATTAATAATTTTTAAG 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:89183455-89183475 NA NA NA NA NA NA chr4 - 89938750 89938777 intron FAM13A Ensembl G11904.1 ATATCTTTAGTATTCTTAATATTATTC 3 2 3 34 1 0.477121255 0 0 0 3 0 0 3 chr4:89938750-89938777 minimal NA NA NA UAUU minimal chr4 - 90168295 90168321 3'utr GPRIN3 Ensembl G11906.1 CAACTCTTTTTATAAACCTTCTTATT 6 3 6 52 0.857142857 0.477121255 0 0.5 0.714285714 2 0 1 6 chr4:90168295-90168321 minimal NA NA NA UAUU minimal chr4 - 99829707 99829731 intron EIF4E Ensembl G11915.1 CTCATTATTTCATACCTTTATTTA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr4:99829707-99829731 minimal NA NA AUUUA UAUU minimal chr4 - 100468664 100468687 3'utr RG9MTD2 Ensembl G11916.1 CCTTTTACTTAAATTATTTTATG 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr4:100468664-100468687 minimal NA NA NA UAUU minimal chr4 - 100819301 100819326 3'utr DNAJB14 Ensembl G11918.1 TTTTTACTTTAATTATACTTTTATG 3 2 3 41 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:100819301-100819326 minimal NA NA NA NA NA chr4 - 101627388 101627410 NoAnnotation G11923.1 ACATATATATATTTTTTAACTC 8 2 4 84 0.5 0.602059991 0 0.166666667 0.375 5 4 0 4 chr4:101627388-101627410 NA NA NA NA UAUU minimal chr4 - 103718450 103718474 3'utr UBE2D3 Ensembl G11928.1 ACCTCATCTTTTTTAATTTTATTT 8 3 7 100 0.875 0.84509804 0 0.166666667 0.375 5 1 0 7 chr4:103718450-103718474 minimal NA NA NA UAUU minimal chr4 - 106393574 106393598 intron PPA2 Ensembl G11939.1 ATACCCAAATAATAAATATTTATG 4 3 3 28 0.75 0.477121255 0 0 0 4 1 0 3 chr4:106393574-106393598 minimal NA NA AUUUA UAUU minimal chr4 - 107924521 107924542 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G11942.1 AAGATGGTGAACTATGCCTGA 44 2 2 218 0.02 -1.45484486 0.24 0.466666667 0.84 16 42 56 2 chr4:107924521-107924542 NA NA NA NA NA NA chr4 - 109729981 109730003 NoAnnotation G11950.1 AATTATTTTTACACTATTTATG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:109729981-109730003 minimal NA NA AUUUA UAUU minimal chr4 - 110632362 110632384 NoAnnotation G11951.1 TACACATCTATAATTATTTATG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr4:110632362-110632384 UUAUUUAU NA NA AUUUA UAUU minimal chr4 - 111538760 111538782 3'utr PITX2 Ensembl G11953.1 TTTCTAACATATTATTATTATT 9 4 6 102 0.666666667 0.77815125 0 0.285714286 0.444444444 5 3 0 6 chr4:111538760-111538782 minimal NA NA NA UAUU minimal chr4 - 114822874 114822897 3'utr ARSJ Ensembl G11962.1 TTTTTTAATTAATTCTATTTTAT 3 3 3 43 1 0.477121255 0 0 0 3 0 0 3 chr4:114822874-114822897 minimal NA NA NA UAUU minimal chr4 - 117935651 117935672 NoAnnotation G11967.1 CTTTTAAAATAATCTATATTT 5 2 2 49 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr4:117935651-117935672 NA NA NA NA UAUU minimal chr1 - 70611287 70611310 3'utr LRRC40 Ensembl G1197.1 TAAATATTTTTACATTTTTATTT 4 4 4 54 1 0.602059991 0 0 0 4 0 0 4 chr1:70611287-70611310 minimal NA NA NA UAUU minimal chr4 - 122589357 122589381 3'utr ANXA5 Ensembl G11979.1 CCATTTTCCATTTATATATATTTT 8 6 6 88 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr4:122589357-122589381 minimal NA NA AUUUA UAUU minimal chr4 - 122782612 122782636 intron BBS7 Ensembl G11981.1 TATTTTTACATACTTATTTATAAT 2 2 2 25 0.5 -0.176091259 0 0 0 4 0 2 2 chr4:122782612-122782636 UUAUUUAU NA NA AUUUA UAUU minimal chr4 - 125586831 125586853 3'utr ANKRD50 Ensembl G11987.1 AATTCTTGTCCCTATGGGACAT 4 3 4 26 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr4:125586831-125586853 NA NA NA NA NA NA chr4 - 125589190 125589215 intron ANKRD50 Ensembl G11988.1 CATACACTGCAGCTATATTTATCCC 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:125589190-125589215 minimal NA NA AUUUA UAUU minimal chr1 + 2329407 2329430 repeat Low_complexity-AT_rich RepeatMasker G12.1 CACACACCTTAATTTATTTATTT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr1:2329407-2329430 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 129960454 129960480 3'utr SCLT1 Ensembl G12003.1 TTACATAAAATATTTCTATTTTATTT 3 2 2 42 0.666666667 0.301029996 0 0 0 3 1 0 2 chr4:129960454-129960480 minimal NA NA NA UAUU minimal chr1 - 70727211 70727235 3'utr ANKRD13C Ensembl G1202.1 CACTTAAAATTTTTCTTATTTATT 5 3 4 63 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:70727211-70727235 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr4 - 140432141 140432167 3'utr SETD7 Ensembl G12022.1 TTCTTTCTATATCATCATTTTATTAT 4 4 4 54 1 0.602059991 0 0 0 4 0 0 4 chr4:140432141-140432167 minimal NA NA NA UAUU minimal chr4 - 141543244 141543269 3'utr TBC1D9 Ensembl G12029.1 CTTTCTTTTAAATTAAATATTTATT 6 2 2 79 0.333333333 0.301029996 0 0 0 6 4 0 2 chr4:141543244-141543269 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 70727300 70727321 3'utr ANKRD13C Ensembl G1203.1 ATTACTCCTATTATTTTTTTT 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:70727300-70727321 minimal NA NA NA UAUU minimal chr4 - 145947782 145947802 intron ANAPC10 Ensembl G12040.1 ACTATTTTCTCTTATTTAAG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:145947782-145947802 minimal NA NA AUUUA UAUU minimal chr4 - 148556989 148557010 NoAnnotation G12045.1 TCATTATTTTCATTATTTATG 10 4 8 122 0.8 0.903089987 0 0.6 0.8 2 2 0 8 chr4:148556989-148557010 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 70728046 70728070 3'utr ANKRD13C Ensembl G1205.1 CATATAAATATATCTATATCTATA 7 2 7 61 1 0.84509804 0 0.75 0.857142857 1 0 0 7 chr1:70728046-70728070 NA NA NA NA NA NA chr4 - 156268240 156268263 3'utr MAP9 Ensembl G12063.1 AATTCTATCTCACTTTATTATTT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr4:156268240-156268263 minimal NA NA NA UAUU minimal chr1 - 70771275 70771298 intron ANKRD13C Ensembl G1207.1 CCATATTTATAAATTATCTATTT 3 3 3 33 0.75 0.176091259 0 0 0 4 0 1 3 chr1:70771275-70771298 minimal NA NA AUUUA UAUU minimal chr4 - 159589977 159589998 3'utr C4orf46 Ensembl G12071.1 CATATTTTTTCCCTATTTATT 4 2 4 48 1 0.602059991 0 0.5 0.75 1 0 0 4 chr4:159589977-159589998 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr4 - 165998449 165998481 3'utr TMEM192 Ensembl G12079.1 ATTAACTCTTATTTATTTTTAAAATTTAATTT 6 4 5 92 0.833333333 0.698970004 0 0 0 6 1 0 5 chr4:165998449-165998481 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 70790696 70790728 intron ANKRD13C Ensembl G1208.1 AATTTGGTTTATTAAACTTTTATATATTTATA 6 4 6 83 1 0.77815125 0 0 0 6 0 0 6 chr1:70790696-70790728 minimal NA NA AUUUA UAUU minimal chr5 + 6755568 6755589 3'utr PAPD7 Ensembl G12115.1 ATATTTTTTATTTAATTTCCT 6 2 4 76 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr5:6755568-6755589 minimal NA NA AUUUA UAUU minimal chr5 + 6756768 6756792 repeat Low_complexity-AT_rich RepeatMasker G12116.1 TTATCAAAAATATTTAAAATATTT 3 3 3 28 1 0.477121255 0.333333333 0 0 3 0 0 3 chr5:6756768-6756792 minimal NA NA AUUUA UAUU minimal chr5 + 7887276 7887299 intron MTRR Ensembl G12118.1 TAATACTACATAACTATTTATTG 9 3 6 80 0.666666667 0.77815125 0.666666667 0.5 0.666666667 3 3 0 6 chr5:7887276-7887299 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 10264995 10265022 3'utr CCT5 Ensembl G12124.1 ACACTGTAGATGCTATAATAAAAATAG 30 5 23 171 0.78125 0.920818754 0.25 0.277777778 0.59375 13 5 2 25 chr5:10264995-10265022 NA NA NA NA NA NA chr5 + 10355943 10355965 intron MARCH6 Ensembl G12126.1 CACTTAAATTAGATTATTTATT 10 2 10 100 1 1 0 0.75 0.9 1 0 0 10 chr5:10355943-10355965 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 10374754 10374777 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G12127.1 TTTGCCAAGGATGTTTTCATTAA 50 3 43 412 0.843137255 1.33243846 0 0.647058824 0.882352941 6 7 1 43 chr5:10374754-10374777 NA NA NA NA NA NA chr5 + 10411446 10411466 coding MARCH6 Ensembl G12131.1 ATCTTCATTCTTATTTATTG 16 4 15 177 0.9375 1.176091259 1 0.6 0.875 2 1 0 15 chr5:10411446-10411466 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 10434079 10434099 3'utr MARCH6 Ensembl G12132.1 TATATTAATTTATTAAATCT 4 2 3 40 0.75 0.477121255 0.25 0.333333333 0.5 2 1 0 3 chr5:10434079-10434099 minimal NA NA AUUUA UAUU minimal chr1 - 71536438 71536466 intron ZRANB2 Ensembl G1214.1 TATCTAACTTTTTTATTTATAAATTTTG 11 4 11 130 1 1.041392685 0 0.5 0.727272727 3 0 0 11 chr1:71536438-71536466 UUAUUUAU NA NA AUUUA UAUU minimal chr5 + 14156116 14156143 intron TRIO Ensembl G12145.1 CTTTCCTTATCTTCCACTTATTTATTT 5 3 5 70 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:14156116-14156143 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 14170957 14170982 intron TRIO Ensembl G12146.1 AACTATCTTTATCACTTTATTTAAC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:14170957-14170982 minimal NA NA AUUUA UAUU minimal chr5 + 14510138 14510158 3'utr TRIO Ensembl G12148.1 TAACCTCATAATTTTTATTT 6 3 4 62 0.666666667 0.602059991 0.833333333 0.5 0.666666667 2 2 0 4 chr5:14510138-14510158 minimal NA NA NA UAUU minimal chr5 + 23208036 23208058 NoAnnotation G12160.1 TATAATTTTCCACTTATTTATT 9 3 3 113 0.333333333 0.477121255 0 0.2 0.555555556 4 6 0 3 chr5:23208036-23208058 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 31537043 31537064 intron C5orf22 Ensembl G12169.1 ATACTTTATTTCTAATTTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:31537043-31537064 minimal NA NA AUUUA UAUU minimal chr5 + 33466416 33466460 intron TARS Ensembl G12176.1 TTCTAATCTAAATTACTTTTAGACTATTAAATATTATTCTATTT 6 5 5 64 0.833333333 0.698970004 0.333333333 0 0 6 1 0 5 chr5:33466416-33466460 minimal NA NA NA UAUU minimal chr5 + 34925620 34925652 3'utr BRIX1 Ensembl G12179.1 TTTTTCAGTTACTTTATATTTATTTTGTATTC 10 4 9 140 0.9 0.954242509 0 0.25 0.4 6 1 0 9 chr5:34925620-34925652 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 34925656 34925691 3'utr BRIX1 Ensembl G12180.1 TGTAAATACTTTTATTATCTAATACTATCTTACGT 76 15 70 844 0.909090909 1.544068044 0.038961039 0.277777778 0.493506494 39 6 1 70 chr5:34925656-34925691 minimal NA NA NA UAUU minimal chr5 + 36182498 36182526 3'utr SKP2 Ensembl G12185.1 CCCATATAACTTTTATCTATTTAATTTT 47 7 39 494 0.829787234 1.591064607 0 0.3125 0.531914894 22 8 0 39 chr5:36182498-36182526 minimal NA NA AUUUA UAUU minimal chr5 + 36903560 36903583 repeat LINE-L2c RepeatMasker G12192.1 TAATACCTATTATTTTCATATTG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr5:36903560-36903583 minimal NA NA NA UAUU minimal chr5 + 36905711 36905733 intron NIPBL Ensembl G12194.1 CCTATTCATAAATTATTTATTG 6 4 6 57 1 0.77815125 0.166666667 0.25 0.5 3 0 0 6 chr5:36905711-36905733 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 36933857 36933879 intron NIPBL Ensembl G12199.1 CTCCTTCATCAACTATACCATA 5 2 3 26 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr5:36933857-36933879 NA NA NA NA NA NA chr5 + 37048653 37048677 coding NIPBL Ensembl G12204.1 AATCTATATAATAATATTTTATCT 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:37048653-37048677 minimal NA NA NA UAUU minimal chr5 + 41917969 41917992 3'utr C5orf51 Ensembl G12219.1 TATTTAAAATTTCTACTTCCCTT 5 4 5 50 1 0.698970004 0.2 0 0 5 0 0 5 chr5:41917969-41917992 minimal NA NA AUUUA UAUU minimal chr5 + 41918414 41918438 3'utr C5orf51 Ensembl G12220.1 TTTTTTCACTTCCTTATTTTATTG 5 3 5 69 1 0.698970004 0.6 0 0 5 0 0 5 chr5:41918414-41918438 minimal NA NA NA UAUU minimal chr5 + 41918650 41918673 3'utr C5orf51 Ensembl G12221.1 ATTAATCCTATTTATTATCTACC 6 3 5 61 0.833333333 0.698970004 0.333333333 0.5 0.666666667 2 1 0 5 chr5:41918650-41918673 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 43080484 43080507 repeat LTR-ERVL-E-int RepeatMasker G12227.1 AATTCACCTTTACCATATCTTTT 4 2 2 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:43080484-43080507 NA NA NA NA NA NA chr5 + 43175931 43175951 3'utr ZNF131 Ensembl G12231.1 CTATAATACTTTATATTTTT 3 3 3 33 1 0.477121255 0.666666667 0 0 3 0 0 3 chr5:43175931-43175951 minimal NA NA NA UAUU minimal chr5 + 43176040 43176062 3'utr ZNF131 Ensembl G12232.1 AAAATTTATTTACATCTGTGGT 3 2 2 24 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:43176040-43176062 minimal NA NA AUUUA UAUU minimal chr5 + 44817322 44817344 NoAnnotation G12236.1 TTATCTAATTTTCATAATTACC 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:44817322-44817344 minimal NA NA NA NA NA chr5 + 44817430 44817454 NoAnnotation G12237.1 TATCAAATTCCACTTAATTATAAG 2 2 2 15 0.5 -0.176091259 0.25 0.333333333 0.5 2 0 2 2 chr5:44817430-44817454 minimal NA NA NA NA NA chr5 + 44819033 44819059 NoAnnotation G12238.1 ACTTTTATTTACAATATTTATGTTAG 42 9 32 481 0.727272727 1.028028724 0.909090909 0.375 0.772727273 10 10 2 32 chr5:44819033-44819059 minimal NA NA AUUUA UAUU minimal chr5 + 44823170 44823192 NoAnnotation G12239.1 TATATATCAAATATTATCTTAT 4 3 4 40 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr5:44823170-44823192 minimal NA NA NA UAUU minimal chr1 - 78030453 78030476 3'utr ZZZ3 Ensembl G1224.1 CCTAATATAAAAATCATATATAT 8 3 8 47 1 0.903089987 0 0.4 0.625 3 0 0 8 chr1:78030453-78030476 NA NA NA NA NA NA chr5 + 44843136 44843158 repeat Simple_repeat-(TATAA)n RepeatMasker G12244.1 CATATAAATATAAATAATATTT 3 2 2 24 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:44843136-44843158 NA NA NA NA UAUU minimal chr5 + 44844109 44844129 NoAnnotation G12245.1 AATCATTCATCTATCTAACT 4 2 4 28 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr5:44844109-44844129 NA NA NA NA NA NA chr5 + 44855186 44855215 NoAnnotation G12247.1 CTTATAATTCAATTTTTATTATTCATTAT 12 8 12 148 1 1.079181246 0 0.090909091 0.166666667 10 0 0 12 chr5:44855186-44855215 minimal NA NA NA UAUU minimal chr5 + 52979117 52979144 3'utr NDUFS4 Ensembl G12254.1 TATAATAAATACATCTCTTAATCTCCT 6 3 6 46 1 0.77815125 0.166666667 0.25 0.5 3 0 0 6 chr5:52979117-52979144 NA NA NA NA NA NA chr1 - 78036769 78036795 intron ZZZ3 Ensembl G1226.1 CTTACTATATTATCTAATTATTCGGG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:78036769-78036795 minimal NA NA NA UAUU minimal chr5 + 56471768 56471795 5'utr GPBP1 Ensembl G12263.1 TTTTTTTCCTTTTATCTTTTATTTACG 7 6 6 117 0.857142857 0.77815125 0.428571429 0 0 7 1 0 6 chr5:56471768-56471795 minimal NA NA AUUUA UAUU minimal chr5 + 56494954 56494986 intron GPBP1 Ensembl G12264.1 AATACTACTATATCAATTCCACAATATTTATG 2 2 2 22 1 0.301029996 1 0 0 2 0 0 2 chr5:56494954-56494986 minimal NA NA AUUUA UAUU minimal chr5 + 56559606 56559628 3'utr GPBP1 Ensembl G12265.1 TTAACTACTTTATTTTCATTTG 2 2 2 23 1 0.301029996 1 0 0 2 0 0 2 chr5:56559606-56559628 minimal NA NA NA UAUU minimal chr5 + 56559751 56559773 3'utr GPBP1 Ensembl G12267.1 TTTAAATATATTCTAACTTATG 4 3 3 39 0.75 0.477121255 1 0 0 4 1 0 3 chr5:56559751-56559773 minimal NA NA NA UAUU minimal chr1 - 78062438 78062462 intron ZZZ3 Ensembl G1227.1 TCAACTATTTAATTATTTAATTTC 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr1:78062438-78062462 minimal NA NA AUUUA UAUU minimal chr5 + 60840821 60840842 3'utr ZSWIM6 Ensembl G12274.1 AAAATATAACATTAACTAATT 4 2 3 25 0.6 0.176091259 0 0 0 5 1 1 3 chr5:60840821-60840842 NA NA NA NA NA NA chr5 + 60841380 60841404 3'utr ZSWIM6 Ensembl G12275.1 CACAAATAACATTATATATATTAT 6 3 5 47 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr5:60841380-60841404 minimal NA NA NA UAUU minimal chr1 - 78063632 78063654 intron ZZZ3 Ensembl G1228.1 TATACTCTATACCCAATTTCCT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr1:78063632-78063654 NA NA NA NA NA NA chr5 + 61923340 61923360 3'utr IPO11 Ensembl G12285.1 AATTTAATTTTATATTTATG 8 3 5 91 0.625 0.698970004 1 0.5 0.75 2 3 0 5 chr5:61923340-61923360 minimal NA NA AUUUA UAUU minimal chr5 + 64083345 64083366 intron CWC27 Ensembl G12287.1 TATTTAACTTTTTACTCCTTT 7 4 7 84 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr5:64083345-64083366 minimal NA NA AUUUA UAUU minimal chr1 - 78079707 78079733 intron ZZZ3 Ensembl G1229.1 CATTTAAAATAATTTTCTATTTATTG 7 4 6 89 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr1:78079707-78079733 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 64196195 64196218 intron CWC27 Ensembl G12290.1 TATATATTCAACTCTTTTTATCC 4 2 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:64196195-64196218 minimal NA NA NA UAUU minimal chr5 + 64870887 64870910 intron PPWD1 Ensembl G12293.1 TAAATTATCTTTTAGTATTTATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr5:64870887-64870910 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 64960634 64960660 3'utr C5orf44 Ensembl G12296.1 TATATTTTCTACACCTATTATTTAAT 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr5:64960634-64960660 minimal NA NA AUUUA UAUU minimal chr1 - 78083633 78083657 repeat LINE-L1MB5 RepeatMasker G1230.1 CAATTCCACATTTATTTATTTATT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:78083633-78083657 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 65313381 65313402 intron ERBB2IP Ensembl G12300.1 CTTCTTATATATTCTAATTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:65313381-65313402 minimal NA NA NA UAUU minimal chr5 + 65320474 65320495 repeat Low_complexity-AT_rich RepeatMasker G12302.1 AATCTCATTTTTATTTCTAAT 4 2 4 44 1 0.602059991 0 1 1 0 0 0 4 chr5:65320474-65320495 minimal NA NA NA UAUU minimal chr5 + 65375252 65375273 repeat Low_complexity-AT_rich RepeatMasker G12304.1 CTCCATTTAAATCTAATTTAT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:65375252-65375273 minimal NA NA AUUUA NA minimal chr5 + 65459312 65459333 intron SREK1 Ensembl G12307.1 TATCAACATTTTAATTTATTT 4 3 3 45 0.75 0.477121255 0 0 0 4 1 0 3 chr5:65459312-65459333 minimal NA NA AUUUA UAUU minimal chr5 + 65463539 65463560 intron SREK1 Ensembl G12309.1 CTTTTTATTATTAACTTATTT 13 4 8 168 0.615384615 0.903089987 0.384615385 0.285714286 0.615384615 5 5 0 8 chr5:65463539-65463560 minimal NA NA NA UAUU minimal chr5 + 65477530 65477556 3'utr SREK1 Ensembl G12311.1 TTATCATCTTAGTTATTTTCTATCTA 8 2 4 91 1 0.903089987 0 0.5 0.75 2 0 0 8 chr5:65477530-65477556 minimal NA NA NA UAUU minimal chr5 + 65478121 65478143 3'utr SREK1 Ensembl G12313.1 TTTAAATATTTTTTATTTTCAC 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:65478121-65478143 minimal NA NA NA UAUU minimal chr5 + 68473928 68473953 3'utr CCNB1 Ensembl G12321.1 TTATTTACTTTTACCACTATTTAAG 22 9 21 248 0.954545455 1.322219295 0.181818182 0.157894737 0.272727273 16 1 0 21 chr5:68473928-68473953 minimal NA NA AUUUA UAUU minimal chr5 + 68505787 68505817 3'utr CENPH Ensembl G12325.1 TAATTTTTTTCTTTTTATATTTCTATATTT 8 6 7 133 0.875 0.84509804 0 0 0 8 1 0 7 chr5:68505787-68505817 minimal NA NA NA UAUU minimal chr5 + 70859979 70860003 intron BDP1 Ensembl G12330.1 CTAAATTTCTATATATATTGGGGT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:70859979-70860003 NA NA NA NA UAUU minimal chr5 + 71146741 71146788 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G12335.1 TCCAGTGCGGTAACGTGACCGATCCCGGAGAAGCCGGCGGGAGCCCC 1110 2 257 804 0.19515885 0.083240103 0.838124054 0.389830508 0.918305598 108 852 212 258 chr5:71146741-71146788 NA NA NA NA NA NA chr5 + 71146851 71146914 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G12336.1 GGGCCCGTGCCTTGGAAAGCGTCGCGGTTCTGGCGGCATCCGGTGAGCTCTCGCTGGCCCTTG 647 8 27 3557 0.024193548 -1.240734094 0.454301075 0.406593407 0.903225806 108 620 469 27 chr5:71146851-71146914 NA NA NA NA NA NA chr5 + 71503362 71503394 3'utr MAP1B Ensembl G12339.1 CTTTTATTTATTACCCCATTTCTTTCAAGTCC 23 8 20 282 0.8 0.823908741 0 0.2 0.36 16 3 2 20 chr5:71503362-71503394 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 71503652 71503673 3'utr MAP1B Ensembl G12340.1 TTATTTTCCAATTTCACAATT 4 3 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:71503652-71503673 minimal NA NA NA UAUU minimal chr5 + 71504524 71504548 3'utr MAP1B Ensembl G12341.1 CTTTCCAATACTCATTTAATTAAG 3 2 3 27 1 0.477121255 0.333333333 0 0 3 0 0 3 chr5:71504524-71504548 minimal NA NA AUUUA NA minimal chr5 + 72170838 72170862 repeat SINE-MIRc RepeatMasker G12344.1 TTACTTAACTTCTATTAATTTATT 3 2 2 38 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:72170838-72170862 minimal NA NA AUUUA UAUU minimal chr5 + 72877526 72877547 3'utr UTP15 Ensembl G12349.1 TTTAACATATTAAATTAATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:72877526-72877547 NA NA NA NA UAUU minimal chr1 - 78146473 78146499 intron ZZZ3 Ensembl G1235.1 TATTTAACTTTATATATTATATATTC 4 4 4 49 1 0.602059991 0 0 0 4 0 0 4 chr1:78146473-78146499 minimal NA NA AUUUA UAUU minimal chr5 + 72877556 72877580 3'utr UTP15 Ensembl G12350.1 ACTAACATTAACATTTAAATTAAT 4 4 4 30 1 0.602059991 0 0 0 4 0 0 4 chr5:72877556-72877580 minimal NA NA AUUUA NA minimal chr5 + 72893318 72893343 NoAnnotation G12352.1 CTTATTAACTCCCCTATTATTTAAT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr5:72893318-72893343 minimal NA NA AUUUA UAUU minimal chr5 + 74073154 74073176 NoAnnotation G12355.1 TATTCTAAACAATATATTTATA 5 3 5 45 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr5:74073154-74073176 minimal NA NA AUUUA UAUU minimal chr5 + 74895516 74895544 3'utr POLK Ensembl G12361.1 TTTATTTTTATTATCTTCAATATTAGAA 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:74895516-74895544 minimal NA NA NA UAUU minimal chr5 + 76131074 76131096 repeat Low_complexity-AT_rich RepeatMasker G12365.1 ACTTTTAAAAATAATTATTTTA 5 3 5 50 0.833333333 0.397940009 0.666666667 0.2 0.333333333 4 0 1 5 chr5:76131074-76131096 minimal NA NA NA UAUU minimal chr5 + 76531109 76531131 intron PDE8B Ensembl G12367.1 ACCATATTTATTCACCTTTAGT 4 2 4 34 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr5:76531109-76531131 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 78619067 78619100 3'utr JMY Ensembl G12375.1 CCCAGCCTGACAAAATCTTTTATTTATTTAAAT 5 2 4 55 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:78619067-78619100 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 78621117 78621142 3'utr JMY Ensembl G12376.1 TACTATTGGGTCCTTAAGGGCTCTA 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr5:78621117-78621142 NA NA NA NA UAUU minimal chr5 + 78622982 78623005 3'utr JMY Ensembl G12377.1 CTTTTAACAATATTCCTCTTTTT 7 2 6 76 0.857142857 0.77815125 0 0.5 0.714285714 2 1 0 6 chr5:78622982-78623005 NA NA NA NA UAUU minimal chr5 + 79024666 79024692 repeat Low_complexity-AT_rich RepeatMasker G12379.1 TATTTACTTATTCTATTAATTAGTAT 5 2 5 67 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:79024666-79024692 minimal NA NA AUUUA UAUU minimal chr1 - 78206630 78206650 intron USP33 Ensembl G1238.1 TTTTCTTCCTATATAATTAT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:78206630-78206650 minimal NA NA NA NA NA chr5 + 79055584 79055611 intron CMYA5 Ensembl G12380.1 TAATATATTATACTATTACTAATATTT 5 3 5 53 1 0.698970004 0 0 0 5 0 0 5 chr5:79055584-79055611 minimal NA NA NA UAUU minimal chr5 + 80061352 80061375 intron MSH3 Ensembl G12387.1 CCTTAATCTATTTCATATATACT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr5:80061352-80061375 NA NA NA NA UAUU minimal chr1 + 36646274 36646294 3'utr MAP7D1 Ensembl G124.1 ATCTTCCTCTCTCTATTTAA 3 2 2 28 1 0.477121255 0 0 0 3 0 0 3 chr1:36646274-36646294 minimal NA NA AUUUA UAUU minimal chr5 + 89809118 89809141 repeat SINE-MIR3 RepeatMasker G12406.1 ATTCTATTTCTACCTATACTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:89809118-89809141 NA NA NA NA UAUU minimal chr5 + 89863281 89863306 intron GPR98 Ensembl G12407.1 CAATTACTAATTCAATCTATTTAAT 4 3 4 40 1 0.602059991 0 0 0 4 0 0 4 chr5:89863281-89863306 minimal NA NA AUUUA UAUU minimal chr5 + 89974267 89974290 repeat Low_complexity-AT_rich RepeatMasker G12410.1 ATATTATTTATTTTCCATTATTT 3 3 3 42 1 0.477121255 0 0 0 3 0 0 3 chr5:89974267-89974290 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 91174436 91174457 repeat LINE-L2 RepeatMasker G12412.1 CATGGGCCATTATTATCATCA 19 2 19 114 1 1.278753601 0 0.833333333 0.947368421 1 0 0 19 chr5:91174436-91174457 minimal NA NA NA UAUU minimal chr5 + 92930187 92930208 3'utr NR2F1 Ensembl G12416.1 ATTCTATACTAATAATTTTTG 15 7 13 152 0.866666667 1.113943352 0.8 0.625 0.8 3 2 0 13 chr5:92930187-92930208 NA NA NA NA NA NA chr5 + 93960103 93960125 intron ANKRD32 Ensembl G12417.1 TCATTTCCATCATATTTATTTT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr5:93960103-93960125 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 94032206 94032235 3'utr ANKRD32 Ensembl G12419.1 CATCATACAAATCTCTTTATTATTAATCT 4 4 4 38 1 0.602059991 0 0 0 4 0 0 4 chr5:94032206-94032235 minimal NA NA NA UAUU minimal chr5 + 96369696 96369717 3'utr LNPEP Ensembl G12429.1 TATATATACTTTTCATTAACT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr5:96369696-96369717 NA NA NA NA NA NA chr5 + 98129490 98129515 repeat Low_complexity-AT_rich RepeatMasker G12432.1 TCTATAACAAAATTTTAAAATATAT 5 2 5 42 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr5:98129490-98129515 NA NA NA NA NA NA chr5 + 98129718 98129753 repeat Low_complexity-AT_rich RepeatMasker G12433.1 AAAGCACTTTATTTTTTATATATTAAATATTTATG 54 11 48 742 0.827586207 0.982271233 0.086206897 0.205128205 0.465517241 31 6 4 48 chr5:98129718-98129753 minimal NA NA AUUUA UAUU minimal chr5 + 98130090 98130110 3'utr RGMB Ensembl G12434.1 ATTACTCTCAATTCTAATTG 3 3 3 24 1 0.477121255 1 0 0 3 0 0 3 chr5:98130090-98130110 NA NA NA NA NA NA chr5 + 98132141 98132164 3'utr RGMB Ensembl G12436.1 TGTAAATACTTTAAATTATTATG 6 5 6 53 1 0.77815125 0.833333333 0 0 6 0 0 6 chr5:98132141-98132164 minimal NA NA NA UAUU minimal chr5 + 99922041 99922061 3'utr FAM174A Ensembl G12438.1 TATCCTTTTATTATATCTTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:99922041-99922061 minimal NA NA NA UAUU minimal chr5 + 102129673 102129693 intron PAM Ensembl G12441.1 ACCATATTTATATAACTACT 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:102129673-102129693 minimal NA NA AUUUA UAUU minimal chr5 + 102365282 102365309 3'utr PAM Ensembl G12444.1 TCTCTATTTAAATTCTTTTTTAAATTT 4 2 4 54 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:102365282-102365309 minimal NA NA AUUUA UAUU minimal chr5 + 102613990 102614010 3'utr C5orf30 Ensembl G12447.1 ATTAAACACCATTATTTATT 6 5 6 48 1 0.77815125 0.666666667 0.2 0.333333333 4 0 0 6 chr5:102613990-102614010 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 110098599 110098624 3'utr SLC25A46 Ensembl G12461.1 CAATTATTCTTATCACCTTTTATTT 4 2 3 39 1 0.602059991 0 0 0 4 0 0 4 chr5:110098599-110098624 minimal NA NA NA UAUU minimal chr5 + 110462954 110462976 3'utr WDR36 Ensembl G12465.1 TCTCTTCACATTAACTTTTATA 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr5:110462954-110462976 minimal NA NA NA NA NA chr5 + 110820765 110820788 3'utr CAMK4 Ensembl G12471.1 CTTTATTTTATTCTTATTTATAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr5:110820765-110820788 UUAUUUAU NA NA AUUUA UAUU minimal chr5 + 112230332 112230355 NoAnnotation G12474.1 TTACTTACTATATTAACTATTTG 13 5 13 134 1 1.113943352 0.076923077 0.3 0.461538462 7 0 0 13 chr5:112230332-112230355 NA NA NA NA UAUU minimal chr5 + 112355945 112355971 3'utr DCP2 Ensembl G12483.1 AACTTTATTTCTTTAGTAATTATTTT 17 5 16 239 0.941176471 1.204119983 0 0.4 0.647058824 6 1 0 16 chr5:112355945-112355971 minimal NA NA NA UAUU minimal chr5 + 115280060 115280082 NoAnnotation G12489.1 AATCTTTCCATTTTAACATATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:115280060-115280082 NA NA NA NA UAUU minimal chr5 + 115354004 115354030 intron AC010282.1 Ensembl G12490.1 CATACTTCTTAATTATTTATTTTATG 4 3 4 50 1 0.602059991 0.5 0 0 4 0 0 4 chr5:115354004-115354030 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 121363234 121363256 3'utr SRFBP1 Ensembl G12500.1 ATCTCATATTTTCTCTTTAGTG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr5:121363234-121363256 NA NA NA NA UAUU minimal chr5 + 121363635 121363660 3'utr SRFBP1 Ensembl G12504.1 TTTTTACTATACTTATTTTAAAATT 5 3 3 60 0.428571429 0 0 0.166666667 0.285714286 5 2 2 3 chr5:121363635-121363660 minimal NA NA NA UAUU minimal chr5 + 121370320 121370341 NoAnnotation G12506.1 CATTATCATATAACCTATTAT 5 2 3 42 0.428571429 0 0 0.4 0.571428571 3 2 2 3 chr5:121370320-121370341 minimal NA NA NA UAUU minimal chr5 + 121394291 121394314 repeat SINE-MIR RepeatMasker G12509.1 CAACAACTCATTAAATATTTAAT 3 3 3 20 1 0.477121255 0 0 0 3 0 0 3 chr5:121394291-121394314 minimal NA NA AUUUA UAUU minimal chr5 + 126888668 126888692 3'utr PRRC1 Ensembl G12525.1 CCTTTTCCCCTCAAATAATATATT 2 2 2 17 0.666666667 0 0 0 0 3 0 1 2 chr5:126888668-126888692 NA NA NA NA UAUU minimal chr5 + 126890510 126890531 3'utr PRRC1 Ensembl G12528.1 TTAACTAAATTACTTTAATAT 4 2 4 36 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr5:126890510-126890531 NA NA NA NA NA NA chr5 + 127523005 127523036 repeat Low_complexity-AT_rich RepeatMasker G12529.1 CTATTATTACTATATTTATTATTATTTATTG 4 3 3 66 0.75 0.477121255 0.5 0 0 4 1 0 3 chr5:127523005-127523036 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 130730230 130730250 3'utr CDC42SE2 Ensembl G12535.1 ACATATTTTTATAATATAAG 3 2 3 24 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr5:130730230-130730250 minimal NA NA NA UAUU minimal chr5 + 132203157 132203179 intron UQCRQ Ensembl G12537.1 TTTACTCTCTTAATTTTTAAAG 3 2 3 31 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr5:132203157-132203179 NA NA NA NA NA NA chr1 - 84335475 84335502 3'utr TTLL7 Ensembl G1254.1 CACCCTAATAACATATATTTATTATAT 7 4 6 60 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr1:84335475-84335502 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 133726614 133726636 3'utr UBE2B Ensembl G12543.1 ATTATAATCTCCAACTTTATTT 4 3 4 38 1 0.602059991 0.25 0 0 4 0 0 4 chr5:133726614-133726636 minimal NA NA NA UAUU minimal chr5 + 134194251 134194274 3'utr C5orf24 Ensembl G12552.1 TTTCATTATTCTATATTTAAACT 4 3 3 46 0.75 0.477121255 0 0 0 4 1 0 3 chr5:134194251-134194274 minimal NA NA AUUUA UAUU minimal chr5 + 134194570 134194593 repeat Low_complexity-AT_rich RepeatMasker G12554.1 ACTAAAAATTCTTTATATTTTTT 3 2 3 33 1 0.477121255 0 0 0 3 0 0 3 chr5:134194570-134194593 minimal NA NA NA UAUU minimal chr5 + 134210532 134210555 intron TXNDC15 Ensembl G12555.1 CAATTTATTATTAATAACATTAT 4 3 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:134210532-134210555 minimal NA NA AUUUA UAUU minimal chr5 + 135513454 135513480 repeat Low_complexity-AT_rich RepeatMasker G12565.1 CCCTAACAATTTTTTATTAAATTTAT 5 3 4 60 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr5:135513454-135513480 minimal NA NA AUUUA UAUU minimal chr5 + 135516194 135516220 NoAnnotation G12567.1 CTTAACATTTCTACATAATATTTATG 21 8 16 225 0.727272727 0.903089987 0.590909091 0.176470588 0.363636364 14 5 1 16 chr5:135516194-135516220 minimal NA NA AUUUA UAUU minimal chr5 + 135516810 135516832 NoAnnotation G12569.1 ATCTATTTCTTTATACTTTTTC 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr5:135516810-135516832 minimal NA NA NA UAUU minimal chr5 + 135517544 135517566 NoAnnotation G12570.1 ATTTCACACATCAATTTTTATT 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:135517544-135517566 minimal NA NA NA UAUU minimal chr5 + 135517949 135517970 NoAnnotation G12571.1 ATTTTCCCTTCTAATATCATT 4 2 4 40 1 0.602059991 0.25 0.5 0.75 1 0 0 4 chr5:135517949-135517970 NA NA NA NA NA NA chr5 + 135518388 135518411 NoAnnotation G12572.1 CTAATTCTTTACTTTAATAAACC 5 4 5 45 1 0.698970004 0 0 0 5 0 0 5 chr5:135518388-135518411 NA NA NA NA NA NA chr5 + 137677960 137677985 intron FAM53C Ensembl G12576.1 TATATATTTATTTCCTTTCTTTTTT 3 2 3 51 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:137677960-137677985 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 138270624 138270652 3'utr CTNNA1 Ensembl G12578.1 TATAATTTACTATCACCTTATTTAAATT 18 7 13 190 0.684210526 0.812913357 0 0.142857143 0.368421053 12 5 1 13 chr5:138270624-138270652 minimal NA NA AUUUA UAUU minimal chr5 + 138661472 138661503 intron MATR3 Ensembl G12587.1 TTTCTATGGGGAACAATTTATAAATCTTAAT 6 4 5 44 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr5:138661472-138661503 minimal NA NA AUUUA NA minimal chr5 + 138664012 138664032 intron MATR3 Ensembl G12589.1 CTTTTAATTCTTACTATTTT 6 2 4 74 0.666666667 0.602059991 0.333333333 0.25 0.5 3 2 0 4 chr5:138664012-138664032 NA NA NA NA UAUU minimal chr5 + 138705350 138705379 repeat Low_complexity-AT_rich RepeatMasker G12591.1 TAAAAAAATTATATTTTTTCAAAAATATT 4 2 3 48 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr5:138705350-138705379 minimal NA NA NA UAUU minimal chr5 + 139495719 139495742 repeat Low_complexity-AT_rich RepeatMasker G12592.1 TTCATAATATATTTTTTTTATTA 9 6 9 119 1 0.954242509 0.111111111 0.285714286 0.444444444 5 0 0 9 chr5:139495719-139495742 minimal NA NA NA UAUU minimal chr5 + 139496791 139496814 NoAnnotation G12594.1 TTTCTTTACTTACAAAATCACTG 4 2 3 35 0.75 0.477121255 0.75 0.333333333 0.5 2 1 0 3 chr5:139496791-139496814 NA NA NA NA NA NA chr5 + 140560024 140560046 repeat Low_complexity-AT_rich RepeatMasker G12603.1 ATTTCATATTATATATTTTAAT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr5:140560024-140560046 minimal NA NA NA UAUU minimal chr5 + 140781454 140781475 intron PCDHGA1 Ensembl G12606.1 TTCTTTTTCCCAAATTATTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:140781454-140781475 minimal NA NA NA UAUU minimal chr1 - 85645113 85645141 intron SYDE2 Ensembl G1261.1 CTTATCATCTCAAATATTTTAGATAATA 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:85645113-85645141 minimal NA NA NA UAUU minimal chr5 + 140809198 140809223 repeat Low_complexity-AT_rich RepeatMasker G12611.1 CTACCTATATATTTCTTCCCAATTT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr5:140809198-140809223 NA NA NA NA UAUU minimal chr5 + 140892469 140892496 3'utr PCDHGA5 Ensembl G12613.1 CAAGTTTTATACTCTAATATTTATATG 20 8 18 229 0.9 1.255272505 0.15 0.307692308 0.55 9 2 0 18 chr5:140892469-140892496 minimal NA NA AUUUA UAUU minimal chr5 + 141370312 141370341 NoAnnotation G12614.1 CTATCAAATAACTTATTTATTTATTTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr5:141370312-141370341 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 145720990 145721014 NoAnnotation G12625.1 TTCATTACTATTATTTATTTAATT 4 4 4 56 1 0.602059991 0 0 0 4 0 0 4 chr5:145720990-145721014 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 145877852 145877879 repeat Low_complexity-AT_rich RepeatMasker G12628.1 TTTTTTTTTTTAATAATAATATTTATT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr5:145877852-145877879 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 + 145878377 145878399 intron TCERG1 Ensembl G12629.1 TTAACTTTTATAATTATTTATG 4 2 3 45 0.75 0.477121255 0.75 0.333333333 0.5 2 1 0 3 chr5:145878377-145878399 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 85645567 85645589 intron SYDE2 Ensembl G1263.1 TAAAATATCCCATTAATTTATT 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr1:85645567-85645589 minimal NA NA AUUUA UAUU minimal chr5 + 145879626 145879648 repeat Low_complexity-AT_rich RepeatMasker G12631.1 ACATCTAAATTAAATAAATCTA 5 2 4 31 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr5:145879626-145879648 NA NA NA NA NA NA chr5 + 148730892 148730913 3'utr GRPEL2 Ensembl G12636.1 TTTCTTTTATTTATTAAACTA 4 2 4 48 1 0.602059991 0.5 0 0 4 0 0 4 chr5:148730892-148730913 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 148731296 148731320 3'utr GRPEL2 Ensembl G12637.1 ATTTTTATACACATAGATTTTCAG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr5:148731296-148731320 minimal NA NA NA NA NA chr5 + 148731689 148731711 3'utr GRPEL2 Ensembl G12638.1 TCAATTTTACCTTATAATCCTT 5 3 4 51 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr5:148731689-148731711 minimal NA NA NA NA NA chr5 + 148731808 148731829 3'utr GRPEL2 Ensembl G12640.1 TTTCCTCTGGCTCTATTTATG 5 2 2 38 1 0.698970004 1 0.333333333 0.6 2 0 0 5 chr5:148731808-148731829 minimal NA NA AUUUA UAUU minimal chr5 + 148732047 148732081 3'utr GRPEL2 Ensembl G12641.1 TTATATTGACAAGCTCTATTTCCTATTCTTTGTA 9 5 8 88 0.888888889 0.903089987 0 0.285714286 0.444444444 5 1 0 8 chr5:148732047-148732081 minimal NA NA NA UAUU minimal chr5 + 148732101 148732135 3'utr GRPEL2 Ensembl G12642.1 TAAACATTGAGCTCACCTTTTATATATTAACCTC 10 6 9 90 0.9 0.954242509 0 0 0 10 1 0 9 chr5:148732101-148732135 minimal NA NA NA UAUU minimal chr5 + 148732948 148732989 3'utr GRPEL2 Ensembl G12643.1 CTATCATTACCAGTTAGAATTAACATTAATTACAATTAACA 9 5 9 60 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr5:148732948-148732989 NA NA NA NA NA NA chr5 + 149362640 149362666 3'utr SLC26A2 Ensembl G12649.1 TTTCTAAACAATTTTAAATATTTATG 4 3 4 44 1 0.602059991 0.25 0 0 4 0 0 4 chr5:149362640-149362666 minimal NA NA AUUUA UAUU minimal chr5 + 149364291 149364312 3'utr SLC26A2 Ensembl G12650.1 CATTATTTTAAACACTATATT 3 3 3 26 1 0.477121255 0.333333333 0 0 3 0 0 3 chr5:149364291-149364312 minimal NA NA NA UAUU minimal chr5 + 151184025 151184045 3'utr G3BP1 Ensembl G12653.1 AATATTTCTTATTTTCTACG 4 2 4 40 1 0.602059991 1 0.5 0.75 1 0 0 4 chr5:151184025-151184045 minimal NA NA NA UAUU minimal chr5 + 151184437 151184466 3'utr G3BP1 Ensembl G12654.1 CAAAACTGTTGTGCCTTCTATTTATCTTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:151184437-151184466 minimal NA NA AUUUA UAUU minimal chr5 + 151187257 151187280 3'utr G3BP1 Ensembl G12656.1 ATACTTTTCTTCATCCCTCTATT 4 2 3 43 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr5:151187257-151187280 NA NA NA NA UAUU minimal chr5 + 151187837 151187857 3'utr G3BP1 Ensembl G12658.1 TTTATATTTACATTCTTATT 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr5:151187837-151187857 minimal NA NA AUUUA UAUU minimal chr1 - 85656127 85656147 coding SYDE2 Ensembl G1266.1 CTACAAACTCTTCATTATCG 4 2 4 24 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:85656127-85656147 minimal NA NA NA NA NA chr5 + 153435961 153435984 3'utr MFAP3 Ensembl G12662.1 TATCTAATCAAATACTCTTCATA 16 5 15 121 0.9375 1.176091259 0 0.444444444 0.6875 5 1 0 15 chr5:153435961-153435984 NA NA NA NA NA NA chr5 + 154193299 154193324 repeat SINE-MIRb RepeatMasker G12663.1 CTTAATAACTTATAATTTATTTTTA 12 5 12 124 1 1.079181246 0 0.428571429 0.666666667 4 0 0 12 chr5:154193299-154193324 minimal NA NA AUUUA UAUU minimal chr5 + 162871069 162871094 3'utr CCNG1 Ensembl G12680.1 TCATTATTCTAATCCTACTCCTACT 5 3 4 45 0.8 0.602059991 0 0 0 5 1 0 4 chr5:162871069-162871094 minimal NA NA NA UAUU minimal chr5 + 164360586 164360606 NoAnnotation G12688.1 TGAAGTCAGTTACCTTTGGA 6 2 6 36 1 0.77815125 0 1 1 0 0 0 6 chr5:164360586-164360606 NA NA NA NA NA NA chr5 + 167284774 167284795 intron ODZ2 Ensembl G12691.1 TCCATTTATATCATTTTCTAT 11 2 7 119 0.636363636 0.84509804 0 0.666666667 0.818181818 2 4 0 7 chr5:167284774-167284795 minimal NA NA AUUUA NA minimal chr5 + 169031649 169031671 3'utr CCDC99 Ensembl G12694.1 CTTAAAATATATACATTATATT 7 2 5 49 0.714285714 0.698970004 0 1 1 0 2 0 5 chr5:169031649-169031671 minimal NA NA NA UAUU minimal chr5 + 170837296 170837321 intron NPM1 Ensembl G12698.1 CTAAACTATTAAATAATTATTAGTA 7 3 7 61 1 0.84509804 0.142857143 0.4 0.571428571 3 0 0 7 chr5:170837296-170837321 minimal NA NA NA UAUU minimal chr5 + 173316148 173316173 repeat Low_complexity-AT_rich RepeatMasker G12701.1 ATAACCTAATATAATCTATATATAT 7 3 6 59 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr5:173316148-173316173 NA NA NA NA NA NA chr5 + 173383931 173383956 3'utr CPEB4 Ensembl G12703.1 CACTTATTTATTTAACTTACTTATC 6 4 6 67 1 0.77815125 0 0 0 6 0 0 6 chr5:173383931-173383956 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 + 173387032 173387055 3'utr CPEB4 Ensembl G12704.1 TTTTTACTGTGTATGGGGAGGTT 5 2 3 33 0.8 0.602059991 0.2 0 0 5 1 0 4 chr5:173387032-173387055 NA NA NA NA NA NA chr5 + 174954464 174954484 3'utr SFXN1 Ensembl G12708.1 ACTTTATATTCAATTATTTA 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:174954464-174954484 minimal NA NA AUUUA UAUU minimal chr5 + 174954789 174954814 3'utr SFXN1 Ensembl G12709.1 ATTTCATAGATAATATATTTAATAT 13 3 13 128 1 1.113943352 0.076923077 0.5 0.692307692 4 0 0 13 chr5:174954789-174954814 minimal NA NA AUUUA UAUU minimal chr5 + 175772657 175772681 repeat Low_complexity-AT_rich RepeatMasker G12711.1 TATATATATTTTTTAATAAATTAT 4 3 3 45 0.75 0.477121255 0 0 0 4 1 0 3 chr5:175772657-175772681 minimal NA NA NA UAUU minimal chr5 + 175934046 175934074 repeat Low_complexity-AT_rich RepeatMasker G12716.1 AAATTCATATTATTATTATTATTATAAT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr5:175934046-175934074 minimal NA NA NA UAUU minimal chr1 - 85731936 85731958 3'utr BCL10 Ensembl G1272.1 CTATCAACAATAAAATTTTTTT 4 2 3 35 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:85731936-85731958 NA NA NA NA NA NA chr5 + 177637736 177637758 3'utr HNRNPAB Ensembl G12721.1 CATCTTATTTAAAATTTCCCCC 13 4 13 104 1 1.113943352 0 0.25 0.538461538 6 0 0 13 chr5:177637736-177637758 minimal NA NA AUUUA UAUU minimal chr5 + 177637967 177637995 3'utr HNRNPAB Ensembl G12723.1 TCACCTTTTTTTCACCTTTTAATTTTAT 6 3 5 89 0.833333333 0.698970004 0 0 0 6 1 0 5 chr5:177637967-177637995 minimal NA NA NA NA NA chr5 + 178311524 178311544 3'utr ZNF354B Ensembl G12724.1 TTTATAAAATCTCTTTATAT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:178311524-178311544 minimal NA NA NA NA NA chr5 + 178314583 178314605 NoAnnotation G12726.1 TATTTCTCTATTTAATATTATG 4 3 4 45 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr5:178314583-178314605 minimal NA NA AUUUA UAUU minimal chr1 - 85731987 85732010 3'utr BCL10 Ensembl G1273.1 TCTCCTATATATTTCTATTATTA 9 3 9 102 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr1:85731987-85732010 minimal NA NA NA UAUU minimal chr5 + 179204170 179204191 3'utr MAML1 Ensembl G12730.1 TCCTATTAATCCCCATATTCT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:179204170-179204191 NA NA NA NA UAUU minimal chr5 - 1463161 1463185 3'utr LPCAT1 Ensembl G12736.1 TTTCTACTTCATTTTTCCTTTTAG 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:1463161-1463185 NA NA NA NA NA NA chr5 - 1792167 1792187 NoAnnotation G12739.1 ATACTATTTATTTATTATTG 22 8 22 242 1 1.342422681 0 0.375 0.772727273 5 0 0 22 chr5:1792167-1792187 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 85732024 85732050 3'utr BCL10 Ensembl G1274.1 TTTTTATTTAAATTACAATTTTATCT 6 3 6 78 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr1:85732024-85732050 minimal NA NA AUUUA UAUU minimal chr5 - 1793922 1793942 NoAnnotation G12740.1 TTATATCTTACTTTTATATT 4 2 4 46 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:1793922-1793942 minimal NA NA NA UAUU minimal chr5 - 6599649 6599672 3'utr NSUN2 Ensembl G12743.1 TATTTTTTAAATTATTATTTATA 7 3 5 91 0.714285714 0.698970004 0 0.2 0.428571429 4 2 0 5 chr5:6599649-6599672 UUAUUUAU NA NA AUUUA UAUU minimal chr5 - 6628480 6628504 intron NSUN2 Ensembl G12744.1 CACCTTATTATCATTCTATTTATG 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:6628480-6628504 minimal NA NA AUUUA UAUU minimal chr5 - 7859359 7859384 3'utr FASTKD3 Ensembl G12746.1 TAAAATTTAAAATTAATTTTAATTT 6 5 6 66 1 0.77815125 0 0 0 6 0 0 6 chr5:7859359-7859384 minimal NA NA AUUUA NA minimal chr5 - 7859403 7859428 3'utr FASTKD3 Ensembl G12747.1 AAGCATCTGTAGTTTTCCTTATACT 4 2 2 35 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr5:7859403-7859428 minimal NA NA NA NA NA chr5 - 8329725 8329746 NoAnnotation G12749.1 TTATTTAATTTCTTAACTATG 6 4 6 62 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr5:8329725-8329746 minimal NA NA AUUUA UAUU minimal chr1 - 85733040 85733068 3'utr BCL10 Ensembl G1275.1 TACTTTTTTAAATATTTTCTATTTTAAG 16 9 15 226 0.9375 1.176091259 0 0.071428571 0.1875 13 1 0 15 chr1:85733040-85733068 NA NA NA NA UAUU minimal chr5 - 8329875 8329904 NoAnnotation G12750.1 CTTTAATTTTACATATTTTCTTTTAATAT 3 3 3 39 0.75 0.176091259 0 0 0 4 0 1 3 chr5:8329875-8329904 NA NA NA NA UAUU minimal chr5 - 14709953 14709976 3'utr ANKH Ensembl G12756.1 CTATAATACATTTCCTATTTTCG 4 3 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:14709953-14709976 NA NA NA NA UAUU minimal chr5 - 17740785 17740806 repeat DNA-Tigger9b RepeatMasker G12761.1 ACATTTATTCTATTATTTATT 6 2 2 74 0.333333333 0.301029996 0 0.5 0.666666667 2 4 0 2 chr5:17740785-17740806 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 32125081 32125107 3'utr GOLPH3 Ensembl G12770.1 TTTATTTTTACTATTTCTTTATCACT 4 3 3 56 0.75 0.477121255 0 0 0 4 1 0 3 chr5:32125081-32125107 minimal NA NA NA UAUU minimal chr5 - 32125715 32125739 3'utr GOLPH3 Ensembl G12772.1 TTATAATTTTAACTATAAAGGTCC 5 2 5 42 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr5:32125715-32125739 minimal NA NA NA NA NA chr5 - 32154205 32154228 intron GOLPH3 Ensembl G12777.1 TTCATTCACTTATATTAATTACT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:32154205-32154228 minimal NA NA NA UAUU minimal chr5 - 32355526 32355554 3'utr ZFR Ensembl G12780.1 TCTTATTAAATCTTCACTGTATTTAATG 6 2 6 75 0.857142857 0.477121255 0 0.4 0.571428571 3 0 1 6 chr5:32355526-32355554 minimal NA NA AUUUA UAUU minimal chr5 - 34908212 34908238 3'utr RAD1 Ensembl G12795.1 ATCTTTTATTTATTTATTATTAGAAA 167 6 164 2337 0.970414201 1.737722593 0 0.5 0.964497041 6 3 2 164 chr5:34908212-34908238 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 34908686 34908708 3'utr RAD1 Ensembl G12796.1 TAAATCCATTTTGTAGAGGGCA 4 2 4 24 1 0.602059991 0 1 1 0 0 0 4 chr5:34908686-34908708 NA NA NA NA NA NA chr1 - 86063408 86063430 NoAnnotation G1280.1 ATTCTAATCTTATTTATTTATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr1:86063408-86063430 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 36873308 36873335 lincRNA CTD-2653M23.2 Ensembl G12802.1 AAAATCATTTTCTACTCACTATTTTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:36873308-36873335 minimal NA NA NA UAUU minimal chr5 - 37288234 37288258 3'utr NUP155 Ensembl G12808.1 AATAAAACTTTTTTCTAATATTTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr5:37288234-37288258 NA NA NA NA UAUU minimal chr5 - 37290185 37290208 3'utr NUP155 Ensembl G12810.1 AATATATTTTTCCTTCCATTATT 3 3 3 34 1 0.477121255 0 0 0 3 0 0 3 chr5:37290185-37290208 minimal NA NA NA UAUU minimal chr5 - 37290255 37290277 3'utr NUP155 Ensembl G12811.1 CTACCACAAATAATTACCTTCT 4 2 4 21 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:37290255-37290277 NA NA NA NA NA NA chr5 - 37323782 37323809 intron NUP155 Ensembl G12813.1 ACTATTTATATAAATATTATATTTTAT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr5:37323782-37323809 minimal NA NA AUUUA UAUU minimal chr5 - 37364323 37364347 intron NUP155 Ensembl G12815.1 TATCCTATTACTTTGTATTTATTT 3 2 2 41 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:37364323-37364347 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 - 37814732 37814758 3'utr GDNF Ensembl G12816.1 AATTTCTCTTTTTTCCCTTATTTATT 3 2 3 43 1 0.477121255 0 0 0 3 0 0 3 chr5:37814732-37814758 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 38939591 38939616 3'utr RICTOR Ensembl G12819.1 CTCTAAAATTTCCTATACTTTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:38939591-38939616 minimal NA NA NA UAUU minimal chr5 - 38959941 38959964 coding RICTOR Ensembl G12820.1 TCAACACTACTTTTTATTTATTG 7 4 6 76 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr5:38959941-38959964 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 40715323 40715346 3'utr TTC33 Ensembl G12825.1 ATGACTGGGAATTACTTTTCTAG 5 2 5 37 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr5:40715323-40715346 NA NA NA NA NA NA chr5 - 40761243 40761265 3'utr AC008810.1 Ensembl G12826.1 ATATAACATTATTATTATTTTG 3 2 3 32 1 0.477121255 0 0 0 3 0 0 3 chr5:40761243-40761265 minimal NA NA NA UAUU minimal chr5 - 40762501 40762526 3'utr AC008810.1 Ensembl G12828.1 TATAAATTTATTCAATAAATATTTG 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:40762501-40762526 minimal NA NA AUUUA UAUU minimal chr5 - 43479115 43479139 intron C5orf28 Ensembl G12840.1 TTCATATTTATCTAATTATTTCCT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr5:43479115-43479139 minimal NA NA AUUUA UAUU minimal chr5 - 43574057 43574093 repeat LTR-LTR49-int RepeatMasker G12841.1 CTTTATTAAAATTAGCTTTAGCATTTATAATACACT 5 2 5 52 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr5:43574057-43574093 minimal NA NA AUUUA UAUU minimal chr5 - 46104894 46104914 NoAnnotation G12844.1 TAATAAATTATTTTCTAGAT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:46104894-46104914 minimal NA NA NA UAUU minimal chr5 - 56216608 56216633 3'utr MIER3 Ensembl G12859.1 TAAATTCTTCATATCTTTTTAGATC 7 4 7 79 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr5:56216608-56216633 NA NA NA NA NA NA chr1 - 87363034 87363058 intron RP4-604K5.1 Ensembl G1287.1 ATTTACACTATATTATATCTATTG 8 5 6 87 0.75 0.77815125 0 0 0 8 2 0 6 chr1:87363034-87363058 minimal NA NA AUUUA UAUU minimal chr5 - 60454540 60454584 3'utr C5orf43 Ensembl G12877.1 TCCAATAATTTTATTCACTGTTAGTATTTAATTCACTGTCAGCT 18 2 18 225 1 1.255272505 0 0.833333333 0.944444444 1 0 0 18 chr5:60454540-60454584 minimal NA NA AUUUA UAUU minimal chr5 - 60455156 60455181 3'utr C5orf43 Ensembl G12878.1 ATTTTCCATTTTTTAAAACATAATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr5:60455156-60455181 NA NA NA NA NA NA chr5 - 60455294 60455323 3'utr C5orf43 Ensembl G12880.1 TATATTAATTACATCTTTTATTATTATTG 29 8 20 370 0.64516129 0.823908741 0 0.272727273 0.483870968 16 9 2 20 chr5:60455294-60455323 minimal NA NA NA UAUU minimal chr5 - 64015992 64016014 NoAnnotation G12884.1 ACTTAAATTCTATCACTATTTT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:64015992-64016014 NA NA NA NA UAUU minimal chr5 - 64017986 64018011 3'utr SREK1IP1 Ensembl G12888.1 TAAATTTCCCATAATTTTAGCATAG 3 2 3 26 1 0.477121255 0 0 0 3 0 0 3 chr5:64017986-64018011 NA NA NA NA NA NA chr1 - 89318695 89318719 3'utr GTF2B Ensembl G1289.1 ATTTAAATTTCTTATCAAATTTCT 5 2 3 61 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr1:89318695-89318719 minimal NA NA AUUUA NA minimal chr5 - 64828352 64828382 intron CENPK Ensembl G12894.1 CCATACTATATTAATCTTTCTTATTTATTG 7 6 7 103 0.875 0.544068044 0 0.142857143 0.25 6 0 1 7 chr5:64828352-64828382 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 64962124 64962149 3'utr SGTB Ensembl G12898.1 CATTATTTAATCTTTACTTAAAACT 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:64962124-64962149 minimal NA NA AUUUA UAUU minimal chr5 - 64964929 64964958 3'utr SGTB Ensembl G12899.1 ACTTAAAATATTTTATTATAAATTAGATG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:64964929-64964958 minimal NA NA NA UAUU minimal chr5 - 68659934 68659960 intron TAF9 Ensembl G12906.1 CTATCATACAACTACTCATTTTCCAT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr5:68659934-68659960 NA NA NA NA NA NA chr5 - 74073842 74073868 3'utr FAM169A Ensembl G12911.1 ATCCACACATCACCCATTTATATTAG 3 2 3 19 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:74073842-74073868 minimal NA NA AUUUA UAUU minimal chr5 - 74669294 74669325 3'utr COL4A3BP Ensembl G12914.1 ATATCTTTATATTTCTATTATATTTTTTAGT 9 7 8 125 0.888888889 0.903089987 0 0.125 0.222222222 7 1 0 8 chr5:74669294-74669325 minimal NA NA NA UAUU minimal chr5 - 74976488 74976511 intron POC5 Ensembl G12916.1 CAACTTTTTTCTAATAATTTATC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:74976488-74976511 minimal NA NA AUUUA NA minimal chr5 - 76369548 76369571 3'utr ZBED3 Ensembl G12919.1 TAATTACTAATCATTTATCTTTA 7 4 6 69 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr5:76369548-76369571 minimal NA NA AUUUA NA minimal chr1 - 91169157 91169184 NoAnnotation G1292.1 TAATACAAATATTTCTTTATATTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr1:91169157-91169184 minimal NA NA NA UAUU minimal chr5 - 77003567 77003595 intron TBCA Ensembl G12924.1 ACTAATCTTATATTAATTATATATTTAG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:77003567-77003595 minimal NA NA AUUUA UAUU minimal chr5 - 77012277 77012308 intron TBCA Ensembl G12925.1 CTTTTATCATCATATTTAATTTTTATTTATG 4 3 3 61 0.75 0.477121255 0 0 0 4 1 0 3 chr5:77012277-77012308 UUAUUUAU NA NA AUUUA UAUU minimal chr5 - 78730703 78730729 intron HOMER1 Ensembl G12932.1 TATTACAACTTTTTATATCATACCTG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:78730703-78730729 minimal NA NA NA UAUU minimal chr5 - 78730948 78730973 intron HOMER1 Ensembl G12933.1 ATTTAAAACATTTTTAGTATTTATA 5 3 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:78730948-78730973 minimal NA NA AUUUA UAUU minimal chr5 - 79274451 79274478 repeat DNA-MER103C RepeatMasker G12934.1 CACCTCTATTTTATACATCATTTCCCT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:79274451-79274478 minimal NA NA NA UAUU minimal chr5 - 79275173 79275199 NoAnnotation G12935.1 TTTACTTTTCAATATTTTCATATTTC 3 2 3 44 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:79275173-79275199 NA NA NA NA UAUU minimal chr5 - 79275507 79275536 NoAnnotation G12936.1 ATTTAAAATATCTAATTATATTTTTTTCT 9 5 8 119 0.888888889 0.903089987 0 0.125 0.222222222 7 1 0 8 chr5:79275507-79275536 minimal NA NA AUUUA UAUU minimal chr5 - 79278105 79278126 NoAnnotation G12937.1 TATTTAGGTAGTTATTTATAC 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:79278105-79278126 UUAUUUAU NA NA AUUUA UAUU minimal chr5 - 79279354 79279376 3'utr MTX3 Ensembl G12938.1 CCATCTATTTTTACTATTATTA 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr5:79279354-79279376 minimal NA NA NA UAUU minimal chr5 - 81545297 81545324 repeat SINE-MIR RepeatMasker G12945.1 CTATTAGTATTTAACCCATTAATATCT 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr5:81545297-81545324 minimal NA NA AUUUA UAUU minimal chr5 - 81571888 81571915 3'utr RPS23 Ensembl G12947.1 AAAACACTGTAGTAATAAATTTTCATA 4 2 3 26 0.75 0.477121255 0 0 0 4 1 0 3 chr5:81571888-81571915 NA NA NA NA NA NA chr5 - 82685549 82685570 NoAnnotation G12950.1 TATATTATTACTATTTAATTC 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:82685549-82685570 minimal NA NA AUUUA UAUU minimal chr5 - 86648142 86648170 NoAnnotation G12954.1 TTTAACCTTCTATATATATATAATTAGA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:86648142-86648170 NA NA NA NA NA NA chr5 - 87494684 87494707 3'utr TMEM161B Ensembl G12956.1 TATTTCAACCCATCATATTCTTA 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr5:87494684-87494707 NA NA NA NA UAUU minimal chr5 - 87498185 87498209 3'utr TMEM161B Ensembl G12957.1 TATCTAATACTAATACCTTAATAT 4 2 4 36 1 0.602059991 0 1 1 0 0 0 4 chr5:87498185-87498209 NA NA NA NA NA NA chr5 - 87502210 87502234 intron TMEM161B Ensembl G12959.1 CATTATTTAAATTTAACCTTTTCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr5:87502210-87502234 minimal NA NA AUUUA UAUU minimal chr1 - 91378971 91378993 NoAnnotation G1296.1 ATTTTACTTATTTAATTATGGG 6 2 6 66 1 0.77815125 0 1 1 0 0 0 6 chr1:91378971-91378993 minimal NA NA AUUUA UAUU minimal chr5 - 87516057 87516077 intron TMEM161B Ensembl G12961.1 TTACTATTTATATATTATTG 4 2 3 45 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr5:87516057-87516077 minimal NA NA AUUUA UAUU minimal chr5 - 88017396 88017419 3'utr MEF2C Ensembl G12962.1 CTTTCTAATATATATAATATTAT 7 5 7 72 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr5:88017396-88017419 minimal NA NA NA UAUU minimal chr5 - 89689824 89689845 3'utr CETN3 Ensembl G12963.1 TACCATCTTATATTCTATTTT 4 2 4 41 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr5:89689824-89689845 minimal NA NA NA UAUU minimal chr5 - 89811543 89811565 3'utr AC027323.1 Ensembl G12965.1 TAACTGTAGAACATTGTTAGCA 4 2 4 9 1 0.602059991 0 0.5 0.75 1 0 0 4 chr5:89811543-89811565 NA NA NA NA NA NA chr5 - 89811842 89811865 3'utr AC027323.1 Ensembl G12966.1 TATCTACTTCTAAAATTACCTAG 6 2 6 47 1 0.77815125 0 0.25 0.5 3 0 0 6 chr5:89811842-89811865 NA NA NA NA NA NA chr5 - 90666105 90666135 3'utr ARRDC3 Ensembl G12968.1 CTCTTAAAAATTATTTTTTTTATTATTATT 7 4 5 103 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr5:90666105-90666135 minimal NA NA NA UAUU minimal chr1 - 91381048 91381071 3'utr ZNF644 Ensembl G1297.1 CACCATTTTATTTCATGTAGTAT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:91381048-91381071 minimal NA NA NA UAUU minimal chr5 - 93855099 93855124 3'utr KIAA0825 Ensembl G12970.1 ATTATTTCTAAAATTATCATTAGTT 3 2 3 32 1 0.477121255 0 0 0 3 0 0 3 chr5:93855099-93855124 minimal NA NA NA UAUU minimal chr5 - 94800206 94800233 3'utr TTC37 Ensembl G12972.1 CAACATTTTTTTAAACTATATTTATTC 7 2 2 71 0.285714286 0.301029996 0 0.2 0.428571429 4 5 0 2 chr5:94800206-94800233 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 - 94859733 94859755 intron TTC37 Ensembl G12974.1 AAAATATTTTTATATTTCCTTT 4 2 3 49 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr5:94859733-94859755 minimal NA NA NA UAUU minimal chr5 - 94883754 94883775 intron TTC37 Ensembl G12976.1 CTAATTTATTTAAAATTAATA 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr5:94883754-94883775 minimal NA NA AUUUA UAUU minimal chr5 - 94886055 94886083 intron TTC37 Ensembl G12977.1 TCATTATCATTACTATTTATTATTATTG 6 4 6 74 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr5:94886055-94886083 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 91381381 91381401 3'utr ZNF644 Ensembl G1298.1 TCTCATTTATATTATCTTCC 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr1:91381381-91381401 minimal NA NA AUUUA UAUU minimal chr5 - 96502530 96502552 intron RIOK2 Ensembl G12981.1 TTATTCCTCATATATTTTCCTA 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:96502530-96502552 minimal NA NA NA UAUU minimal chr1 - 91381446 91381473 3'utr ZNF644 Ensembl G1299.1 CCTCTTACTTTATTTAACATTGTAGAA 11 3 11 115 0.916666667 0.740362689 0 0.222222222 0.416666667 7 0 1 11 chr1:91381446-91381473 minimal NA NA AUUUA UAUU minimal chr5 - 101483432 101483456 NoAnnotation G12994.1 ATACTATCATTACTCTTATTTATG 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:101483432-101483456 UUAUUUAU NA NA AUUUA UAUU minimal chr5 - 102074371 102074398 NoAnnotation G12997.1 TTTAACTTAACTTTTCATTATTTATTT 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:102074371-102074398 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 102885093 102885117 3'utr NUDT12 Ensembl G12999.1 ATACTTAACATTTATTTAACTTAA 5 3 4 47 0.8 0.602059991 0 0 0 5 1 0 4 chr5:102885093-102885117 minimal NA NA AUUUA UAUU minimal chr1 + 2335164 2335191 repeat Low_complexity-AT_rich RepeatMasker G13.1 AATTATAAATATATATTATATTTTAAT 7 5 7 79 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr1:2335164-2335191 minimal NA NA NA UAUU minimal chr1 - 91381589 91381611 3'utr ZNF644 Ensembl G1300.1 CTATTTACCCTTTACATTTTTG 6 2 4 66 0.666666667 0.602059991 0 0.666666667 0.833333333 1 2 0 4 chr1:91381589-91381611 minimal NA NA AUUUA UAUU minimal chr5 - 102885618 102885644 3'utr NUDT12 Ensembl G13000.1 TATAATCATTACCAATACTATTTATT 3 3 3 32 0.75 0.176091259 0 0 0 4 0 1 3 chr5:102885618-102885644 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 - 107006449 107006471 5'utr EFNA5 Ensembl G13008.1 TGGGCGCCTCTTTCCTTTCTCG 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:107006449-107006471 NA NA NA NA NA NA chr5 - 108670676 108670707 3'utr PJA2 Ensembl G13012.1 ACTTAACCTAATTTTATTTTTTTAACATTTT 14 8 12 187 0.8 0.77815125 0 0.071428571 0.133333333 13 2 1 12 chr5:108670676-108670707 minimal NA NA NA UAUU minimal chr5 - 108670712 108670738 3'utr PJA2 Ensembl G13013.1 CATTTATCTTATTTCTCTATTTTATG 20 7 17 251 0.85 1.230448921 0 0.416666667 0.65 7 3 0 17 chr5:108670712-108670738 minimal NA NA AUUUA UAUU minimal chr5 - 108671360 108671387 3'utr PJA2 Ensembl G13014.1 ATCTTTCCATATCATATTTCATTAATG 5 2 3 54 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr5:108671360-108671387 NA NA NA NA UAUU minimal chr5 - 108672837 108672864 3'utr PJA2 Ensembl G13016.1 CAAATAATTATATATAAATATATTTAA 5 4 5 47 1 0.698970004 0 0 0 5 0 0 5 chr5:108672837-108672864 minimal NA NA AUUUA UAUU minimal chr5 - 114545731 114545756 NoAnnotation G13021.1 ATCTTTAGTTATTTATATTTAATCT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr5:114545731-114545756 UUAUUUAU NA NA AUUUA UAUU minimal chr5 - 114566763 114566786 intron PGGT1B Ensembl G13024.1 CAACTTATTTATTCATTTATTAT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:114566763-114566786 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 91404228 91404251 coding ZNF644 Ensembl G1303.1 TAAATTTATTCCCTTTATTTAAG 4 3 3 43 0.75 0.477121255 0 0 0 4 1 0 3 chr1:91404228-91404251 minimal NA NA AUUUA UAUU minimal chr5 - 114914718 114914742 3'utr TICAM2 Ensembl G13031.1 CTTAATTTCTTTTTTCTTATTCCC 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr5:114914718-114914742 minimal NA NA NA UAUU minimal chr5 - 114950884 114950907 3'utr TMED7 Ensembl G13034.1 CATATTTTATTTCTGTAGTTTCT 5 4 5 61 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:114950884-114950907 minimal NA NA NA UAUU minimal chr5 - 115165488 115165516 3'utr ATG12 Ensembl G13040.1 TACTTTTTCAAATCATATTTAATTATTT 9 4 9 107 1 0.954242509 0 0.8 0.888888889 1 0 0 9 chr5:115165488-115165516 minimal NA NA AUUUA UAUU minimal chr5 - 115781550 115781573 3'utr SEMA6A Ensembl G13045.1 ACTCTTCCAAATATCATCCTATG 3 3 3 19 1 0.477121255 0 0 0 3 0 0 3 chr5:115781550-115781573 NA NA NA NA NA NA chr5 - 118239551 118239578 intron DTWD2 Ensembl G13048.1 ATAACTTATTTCTTTTTAACTCTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr5:118239551-118239578 minimal NA NA NA UAUU minimal chr5 - 123939338 123939359 NoAnnotation G13055.1 TTCCTATACTATATAATATTG 4 2 4 36 1 0.602059991 0 0.5 0.75 1 0 0 4 chr5:123939338-123939359 NA NA NA NA UAUU minimal chr5 - 130757423 130757449 NoAnnotation G13064.1 TTCATAATAACTTATTTATTTCTAGT 3 2 3 37 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:130757423-130757449 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 130759660 130759681 3'utr RAPGEF6 Ensembl G13065.1 TAAAAATACCATTTATTATTA 3 2 3 24 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr5:130759660-130759681 minimal NA NA AUUUA UAUU minimal chr5 - 130761672 130761693 3'utr RAPGEF6 Ensembl G13066.1 CAAATTAAATATATTTTATAT 5 2 2 45 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr5:130761672-130761693 minimal NA NA NA UAUU minimal chr5 - 130797814 130797836 intron RAPGEF6 Ensembl G13067.1 CTCTTATTTAATCATATTTATG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:130797814-130797836 minimal NA NA AUUUA UAUU minimal chr5 - 130977749 130977771 3'utr FNIP1 Ensembl G13072.1 AATTAAAACTAATTTTTTCTTG 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr5:130977749-130977771 NA NA NA NA NA NA chr5 - 130979594 130979614 3'utr FNIP1 Ensembl G13073.1 ATACTACTTTATACCATTTG 6 2 5 49 0.833333333 0.698970004 0 0.333333333 0.666666667 2 1 0 5 chr5:130979594-130979614 minimal NA NA NA NA NA chr5 - 130982382 130982407 intron FNIP1 Ensembl G13074.1 TATCCATATATTACTCCTTCCCCCC 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr5:130982382-130982407 NA NA NA NA UAUU minimal chr5 - 131032307 131032332 intron FNIP1 Ensembl G13075.1 CTAACAAATAATTTTAATTTAATAT 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:131032307-131032332 minimal NA NA AUUUA NA minimal chr5 - 131051459 131051482 intron FNIP1 Ensembl G13076.1 ACATCCTATTATTTATTTTTTAT 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr5:131051459-131051482 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 132029122 132029144 3'utr KIF3A Ensembl G13077.1 TATTCTCTTTTCCCTTTAATTT 3 2 3 38 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:132029122-132029144 NA NA NA NA UAUU minimal chr5 - 132030722 132030748 3'utr KIF3A Ensembl G13078.1 TATTTATTAAATTAATATTATTTTAA 4 2 2 45 0.75 0.477121255 0 0 0 4 1 0 3 chr5:132030722-132030748 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 - 132039612 132039633 intron KIF3A Ensembl G13079.1 ACATATATATTTTTTAATTTG 3 2 2 34 0.5 0 0 0 0 4 1 1 2 chr5:132039612-132039633 NA NA NA NA UAUU minimal chr5 - 132093858 132093881 3'utr SEPT8 Ensembl G13080.1 CCTATCATATACAGGGAGAGGTG 7 2 3 29 0.428571429 0.477121255 0 0.2 0.428571429 4 4 0 3 chr5:132093858-132093881 NA NA NA NA NA NA chr5 - 132213131 132213154 3'utr AFF4 Ensembl G13081.1 CAACTATTTCCACATTATTTATT 22 4 12 223 0.5 0.602059991 0 0.4 0.75 6 10 2 12 chr5:132213131-132213154 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 132216296 132216318 3'utr AFF4 Ensembl G13085.1 CTTTATTACCTAATATCTTTTT 4 2 2 47 0.5 0.301029996 0 0 0 4 2 0 2 chr5:132216296-132216318 minimal NA NA NA UAUU minimal chr5 - 133529805 133529838 NoAnnotation G13087.1 TACATTTTATTTCTACTTTTTATTATATATATT 40 10 34 589 0.790697674 0.929418926 0 0.176470588 0.348837209 28 6 3 34 chr5:133529805-133529838 minimal NA NA NA UAUU minimal chr5 - 133529860 133529891 NoAnnotation G13088.1 ATTTCTATATTTTTTCCAATTACATTTAAAG 6 3 6 67 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr5:133529860-133529891 minimal NA NA AUUUA UAUU minimal chr5 - 137087162 137087188 3'utr HNRNPA0 Ensembl G13098.1 ATGTTAATATTTAACTTAAATATTTG 13 4 11 138 0.846153846 1.041392685 0 0.2 0.384615385 8 2 0 11 chr5:137087162-137087188 minimal NA NA AUUUA UAUU minimal chr5 - 137088317 137088339 3'utr HNRNPA0 Ensembl G13100.1 TTTTATTTTTAATAAATCATTG 10 5 10 120 1 1 0 0.428571429 0.6 4 0 0 10 chr5:137088317-137088339 minimal NA NA NA UAUU minimal chr5 - 137088568 137088593 3'utr HNRNPA0 Ensembl G13103.1 ACTCTATTTTTTTATTATTACTTGG 60 9 54 806 0.9 1.73239376 0 0.458333333 0.783333333 13 6 0 54 chr5:137088568-137088593 minimal NA NA NA UAUU minimal chr5 - 137218799 137218824 NoAnnotation G13105.1 AACTCTTAATTTCTATATTTAGAAC 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr5:137218799-137218824 minimal NA NA AUUUA UAUU minimal chr5 - 137331109 137331132 intron FAM13B Ensembl G13108.1 CATATTTTAGTAATTTCATATTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr5:137331109-137331132 NA NA NA NA UAUU minimal chr1 - 91482249 91482272 intron ZNF644 Ensembl G1311.1 TCTATCAATTATTTTATCTAATT 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr1:91482249-91482272 minimal NA NA NA UAUU minimal chr5 - 137891189 137891211 3'utr HSPA9 Ensembl G13110.1 AAACTTAGCTATTTATATTAGG 5 2 5 40 0.714285714 0.22184875 0 0.666666667 0.857142857 1 0 2 5 chr5:137891189-137891211 minimal NA NA AUUUA UAUU minimal chr5 - 139713218 139713245 3'utr HBEGF Ensembl G13114.1 TTTTTAACAATCTAACAATAATATTTC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:139713218-139713245 NA NA NA NA UAUU minimal chr5 - 139713266 139713294 3'utr HBEGF Ensembl G13115.1 CCTCTTAAATTATATATTTATTTTATTC 22 5 20 270 0.833333333 0.823908741 0 0.4 0.625 9 2 2 20 chr5:139713266-139713294 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr5 - 140698281 140698306 3'utr TAF7 Ensembl G13119.1 TTCAACCTTAATTATAGCTTCATTG 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr5:140698281-140698306 minimal NA NA NA NA NA chr5 - 142659923 142659947 3'utr NR3C1 Ensembl G13122.1 AACTTCTAATATATTTTTATATTT 5 3 5 57 1 0.698970004 0 0 0 5 0 0 5 chr5:142659923-142659947 minimal NA NA NA UAUU minimal chr5 - 142660029 142660057 3'utr NR3C1 Ensembl G13123.1 TAAACTCAAAACTTAACATATTTACTAA 8 3 8 62 1 0.903089987 0 0.4 0.625 3 0 0 8 chr5:142660029-142660057 minimal NA NA AUUUA UAUU minimal chr5 - 142660869 142660898 3'utr NR3C1 Ensembl G13124.1 CTCATTTTTTCTTACATAATTTTTTATTC 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr5:142660869-142660898 minimal NA NA NA UAUU minimal chr5 - 143538828 143538859 3'utr YIPF5 Ensembl G13130.1 CTTATTAAAACTTTCCCAATTAATTTTAACT 5 3 5 49 1 0.698970004 0 0 0 5 0 0 5 chr5:143538828-143538859 minimal NA NA NA UAUU minimal chr5 - 145471054 145471084 intron PLAC8L1 Ensembl G13133.1 ATCTTTTTCTCTATATTTCTCTATATTTAT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr5:145471054-145471084 minimal NA NA AUUUA UAUU minimal chr5 - 145521363 145521389 intron LARS Ensembl G13134.1 TTATTACTTACCTAATTTATTTATTT 5 2 2 77 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr5:145521363-145521389 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 145526038 145526063 intron LARS Ensembl G13135.1 TTCTAACCTCTATTTTATTTTATTT 3 2 3 43 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:145526038-145526063 minimal NA NA NA UAUU minimal chr1 - 91852782 91852953 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G1315.1 TTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGG 6679 41 293 50405 0.033114828 -0.869592113 0.06272604 0.393788131 0.876469259 1093 6386 2169 293 chr1:91852782-91852953 NA NA NA NA NA NA chr1 - 91852954 91853046 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G1315.2 TGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGG 3238 21 104 25920 0.02723226 -0.747889645 0.117831893 0.342178771 0.876669285 471 3134 581 104 chr1:91852954-91853046 NA NA NA NA NA NA chr5 - 156560405 156560428 NoAnnotation G13153.1 TTCTCTTATTTAATCCTTAGAAC 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr5:156560405-156560428 minimal NA NA AUUUA UAUU minimal chr5 - 157213334 157213364 3'utr CLINT1 Ensembl G13155.1 ATAAAACTTTATTTCCATTATATTCATAAT 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chr5:157213334-157213364 minimal NA NA NA UAUU minimal chr5 - 157214041 157214067 3'utr CLINT1 Ensembl G13156.1 CTATTATACTATCCAAATTTTTATTG 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr5:157214041-157214067 minimal NA NA NA UAUU minimal chr1 - 91853094 91853149 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G1316.1 TTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCTGTACACCTGTCAAACG 628 8 558 2136 0.119537275 -0.859854652 0.011139674 0.442105263 0.988646101 53 70 4040 558 chr1:91853094-91853149 NA NA NA NA NA NA chr5 - 157253010 157253035 intron CLINT1 Ensembl G13160.1 TTCCATAATATTTATCTATTTTATC 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr5:157253010-157253035 minimal NA NA AUUUA UAUU minimal chr1 - 92148072 92148098 3'utr TGFBR3 Ensembl G1317.1 CCTTAAATATATCCCATATATTTAAT 5 2 5 44 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:92148072-92148098 minimal NA NA AUUUA UAUU minimal chr5 - 159830179 159830204 3'utr SLU7 Ensembl G13170.1 TTTATTCTTCTTGCTGCCTGGCTTT 5 4 4 62 0.8 0.602059991 0 0 0 5 1 0 4 chr5:159830179-159830204 minimal NA NA NA UAUU minimal chr5 - 162880215 162880241 NoAnnotation G13174.1 ACATTTTATTCAATATCCTATTTATG 5 4 5 54 1 0.698970004 0 0 0 5 0 0 5 chr5:162880215-162880241 minimal NA NA AUUUA UAUU minimal chr5 - 162880695 162880725 3'utr NUDCD2 Ensembl G13175.1 CATTTTACTAATTCCATATTTAACCATATT 28 8 26 278 0.896551724 1.113943352 0 0.3 0.517241379 14 2 1 26 chr5:162880695-162880725 minimal NA NA AUUUA UAUU minimal chr5 - 167975524 167975559 3'utr PANK3 Ensembl G13178.1 ATGTTAGAATCATACTTTTTATTTTCTACTTTCTA 30 10 27 384 0.870967742 1.130333768 0 0.24 0.387096774 19 3 1 27 chr5:167975524-167975559 minimal NA NA NA UAUU minimal chr5 - 167975825 167975853 3'utr PANK3 Ensembl G13180.1 CCATAAATTTTATTCATAATAAACTAAG 8 7 8 69 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr5:167975825-167975853 minimal NA NA NA UAUU minimal chr5 - 167976508 167976529 3'utr PANK3 Ensembl G13182.1 ATATTATTAAATTTTTTATTG 9 4 6 111 0.666666667 0.77815125 0 0.5 0.666666667 3 3 0 6 chr5:167976508-167976529 minimal NA NA NA UAUU minimal chr5 - 167977848 167977875 repeat SINE-MIR3 RepeatMasker G13184.1 TCTTGCCTCTTTGAACATTATTTTTAT 2 2 2 23 1 0.301029996 0.5 0 0 2 0 0 2 chr5:167977848-167977875 minimal NA NA NA UAUU minimal chr5 - 167992149 167992175 intron PANK3 Ensembl G13190.1 TTTAAATTATACTTAATTAGTACTTT 26 2 26 264 1 1.414973348 0 0.4 0.769230769 6 0 0 26 chr5:167992149-167992175 minimal NA NA NA NA NA chr5 - 171423810 171423833 intron FBXW11 Ensembl G13194.1 AAAAATATTTTCCCTTATTTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr5:171423810-171423833 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 171637177 171637201 3'utr UBTD2 Ensembl G13195.1 CTTTAACTACTTCCTTATTTTTAT 4 2 4 50 1 0.602059991 0 1 1 0 0 0 4 chr5:171637177-171637201 minimal NA NA NA UAUU minimal chr5 - 172744112 172744136 3'utr STC2 Ensembl G13196.1 ATTTCACTTTTTTTATTTATCCAG 56 11 50 734 0.892857143 1.698970004 0 0.7 0.892857143 6 6 0 50 chr5:172744112-172744136 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 93071929 93071955 intron EVI5 Ensembl G1320.1 TAACTAAATTTAATCTTTTATTTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:93071929-93071955 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 174542072 174542106 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G13201.1 TGGTGGTGCATGGCCATTCTTAGTTGGTGGAGTG 26 3 3 180 0.063829787 -0.865301426 0.234042553 0.333333333 0.617021277 18 23 21 3 chr5:174542072-174542106 NA NA NA NA NA NA chr5 - 175819480 175819502 3'utr CLTB Ensembl G13202.1 ACTCTTTTTACACTTATTTATT 3 2 3 36 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr5:175819480-175819502 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr5 - 175953762 175953785 3'utr RNF44 Ensembl G13204.1 CAATCATTATTTTTTTTAATATT 5 2 4 64 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr5:175953762-175953785 minimal NA NA NA UAUU minimal chr5 - 178030533 178030556 3'utr CLK4 Ensembl G13209.1 TCAACTAAACATTCTAATATTTT 7 3 6 55 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr5:178030533-178030556 NA NA NA NA UAUU minimal chr5 - 178138928 178138962 3'utr ZNF354A Ensembl G13212.1 TAATAATTTAGCCCTCATTAGGTATTTAATTCCA 6 2 6 49 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr5:178138928-178138962 minimal NA NA AUUUA UAUU minimal chr5 - 179662860 179662882 3'utr MAPK9 Ensembl G13217.1 ATCATATCTTATTCCCTTTTAT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr5:179662860-179662882 minimal NA NA NA UAUU minimal chr5 - 180270328 180270360 NoAnnotation G13218.1 ATTCTATTCATACTCTATTTTTCCATCTTTTG 5 3 5 63 1 0.698970004 0 0.25 0.4 3 0 0 5 chr5:180270328-180270360 NA NA NA NA UAUU minimal chr5 - 180615455 180615488 tRNA tRNA-tRNA-Val-GTY RepeatMasker G13220.1 GTTTCCGTAGTGTAGTGGTCATCACGTTCGCCT 55 3 3 551 0.04109589 -0.801632346 0.520547945 0.333333333 0.671232877 24 52 18 3 chr5:180615455-180615488 NA NA NA NA NA NA chr6 + 1395676 1395699 3'utr FOXF2 Ensembl G13228.1 TTTTCTACCACCATATTTTAAAG 2 2 2 15 1 0.301029996 1 0 0 2 0 0 2 chr6:1395676-1395699 NA NA NA NA UAUU minimal chr6 + 1612520 1612540 3'utr FOXC1 Ensembl G13230.1 AAAACTCTATTTTCTTAACC 6 4 5 43 0.833333333 0.698970004 0.666666667 0.2 0.333333333 4 1 0 5 chr6:1612520-1612540 NA NA NA NA UAUU minimal chr6 + 1612839 1612864 3'utr FOXC1 Ensembl G13232.1 CAACATAGTAATTTATTTTTAATTT 35 6 34 398 0.944444444 1.230448921 0.027777778 0.4 0.75 9 1 1 34 chr6:1612839-1612864 minimal NA NA AUUUA UAUU minimal chr6 + 1612966 1613008 3'utr FOXC1 Ensembl G13233.1 AAACTGTATTAATCTTATTCTATCCTCTTTTCTTTCTTTTTG 111 16 83 1532 0.715517241 1.140926842 0.00862069 0.402985075 0.655172414 40 28 5 83 chr6:1612966-1613008 minimal NA NA NA UAUU minimal chr6 + 1613028 1613055 3'utr FOXC1 Ensembl G13234.1 TTTATTAATAAATTACCATTCAGTTTG 5 4 5 46 0.833333333 0.397940009 0.333333333 0.2 0.333333333 4 0 1 5 chr6:1613028-1613055 minimal NA NA NA UAUU minimal chr6 + 1613587 1613614 3'utr FOXC1 Ensembl G13237.1 TATATAATTCTCCCCCATTTACAATCC 9 5 9 72 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr6:1613587-1613614 minimal NA NA AUUUA NA minimal chr1 - 93617919 93617941 3'utr TMED5 Ensembl G1324.1 CTTTTTTTAATTTCACTATTCC 7 3 7 84 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr1:93617919-93617941 NA NA NA NA UAUU minimal chr6 + 4428285 4428317 rRNA rRNA-5S RepeatMasker G13244.1 ACCGCCTGGGAATACCGGGTGCTGTAGGCTTA 560 4 13 3907 0.0203125 -0.794541667 0 0.407407407 0.95 32 547 80 13 chr6:4428285-4428317 NA NA NA NA NA NA chr6 + 7413246 7413268 repeat Low_complexity-AT_rich RepeatMasker G13249.1 TTTTTTATTATTATTTAATATT 3 2 2 46 1 0.477121255 0 0 0 3 0 0 3 chr6:7413246-7413268 minimal NA NA AUUUA UAUU minimal chr1 - 93618936 93618961 3'utr TMED5 Ensembl G1325.1 TACATATTTATTAAAAATTTTTATT 4 3 3 46 0.75 0.477121255 0 0 0 4 1 0 3 chr1:93618936-93618961 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 7417917 7417950 repeat Low_complexity-AT_rich RepeatMasker G13250.1 AACTTTGTACATTTTTATTTTTATATTTTTTTC 8 6 8 137 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr6:7417917-7417950 minimal NA NA NA UAUU minimal chr6 + 7989860 7989887 NoAnnotation G13258.1 CTATTTTTTTCATAATTTACTATTTAT 11 4 4 172 0.333333333 0.301029996 0.333333333 0.222222222 0.416666667 7 7 1 4 chr6:7989860-7989887 minimal NA NA AUUUA UAUU minimal chr1 - 93619457 93619481 3'utr TMED5 Ensembl G1327.1 ACACATTTTCTCTAACCCTTAACT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr1:93619457-93619481 NA NA NA NA NA NA chr6 + 11136673 11136702 3'utr RP4-761I2.2 Ensembl G13271.1 ACTAGTCATCACAAAATATCTATTTAACC 10 4 9 72 0.909090909 0.698970004 0 0.222222222 0.363636364 7 0 1 10 chr6:11136673-11136702 minimal NA NA AUUUA UAUU minimal chr6 + 11137097 11137124 3'utr RP4-761I2.2 Ensembl G13273.1 TACTGGGAGGATATTTAAATTAGATTT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr6:11137097-11137124 minimal NA NA AUUUA UAUU minimal chr6 + 11138918 11138939 3'utr RP4-761I2.2 Ensembl G13274.1 TTTTAACTTTCACTTTAAACT 4 3 3 39 0.75 0.477121255 0 0 0 4 1 0 3 chr6:11138918-11138939 NA NA NA NA NA NA chr6 + 13621098 13621118 3'utr NOL7 Ensembl G13278.1 AATTTATCTAATAAATCATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:13621098-13621118 minimal NA NA AUUUA NA minimal chr6 + 13632838 13632862 NoAnnotation G13279.1 TACATTTAGTAACTATTCCCTAAT 4 2 3 31 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:13632838-13632862 minimal NA NA AUUUA UAUU minimal chr1 - 93619728 93619751 3'utr TMED5 Ensembl G1328.1 CCCAACTTTTCTCTATTTACATA 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:93619728-93619751 minimal NA NA AUUUA UAUU minimal chr6 + 15246343 15246366 intron JARID2 Ensembl G13282.1 ACTTCCAACATTTTTTATTTATC 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr6:15246343-15246366 UUAUUUAU NA NA AUUUA UAUU minimal chr6 + 16148308 16148336 3'utr MYLIP Ensembl G13285.1 TCAAATATTAAAACTCTACTTTTTTATG 22 8 13 217 0.481481481 0.335792102 0.037037037 0.3 0.481481481 14 9 5 13 chr6:16148308-16148336 minimal NA NA NA UAUU minimal chr6 + 17609520 17609548 3'utr FAM8A1 Ensembl G13288.1 CATATTCACATACTACTTTCCTTATATT 20 5 19 178 0.904761905 0.977723605 0 0.285714286 0.523809524 10 1 1 19 chr6:17609520-17609548 minimal NA NA NA UAUU minimal chr1 - 94335351 94335373 3'utr DNTTIP2 Ensembl G1329.1 CTCCTTTATTTACTTATTAAAG 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:94335351-94335373 minimal NA NA AUUUA UAUU minimal chr6 + 20492742 20492770 3'utr E2F3 Ensembl G13296.1 CTTTTCCCCATTTCCCATATTTATCTCA 19 7 16 213 0.761904762 0.726998728 0 0.176470588 0.333333333 14 3 2 16 chr6:20492742-20492770 minimal NA NA AUUUA UAUU minimal chr6 + 20493332 20493356 3'utr E2F3 Ensembl G13297.1 TCTACTCACATTTTCATTATTTAG 31 7 29 322 0.935483871 1.462397998 0.161290323 0.5 0.709677419 9 2 0 29 chr6:20493332-20493356 minimal NA NA AUUUA UAUU minimal chr6 + 20622306 20622333 intron CDKAL1 Ensembl G13299.1 CTCTAATTTATTACAACTCCTAATATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:20622306-20622333 minimal NA NA AUUUA UAUU minimal chr1 + 38268762 38268787 repeat Low_complexity-AT_rich RepeatMasker G133.1 TATAATTAACTATAATTTATTTTAT 4 4 4 47 1 0.602059991 0.25 0 0 4 0 0 4 chr1:38268762-38268787 minimal NA NA AUUUA UAUU minimal chr6 + 21597233 21597254 3'utr SOX4 Ensembl G13302.1 ATTTTTTTCTTCTCTTAATCG 12 5 12 144 1 1.079181246 1 0.6 0.833333333 2 0 0 12 chr6:21597233-21597254 NA NA NA NA NA NA chr6 + 21597272 21597296 3'utr SOX4 Ensembl G13303.1 ATTATTTCAATGGTGGGGTTAATA 5 2 4 36 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr6:21597272-21597296 minimal NA NA NA UAUU minimal chr6 + 21597655 21597676 repeat Low_complexity-T-rich RepeatMasker G13304.1 CCAAACATATTTTTTCTTTTG 4 3 4 40 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr6:21597655-21597676 NA NA NA NA UAUU minimal chr6 + 21597814 21597855 repeat Low_complexity-AT_rich RepeatMasker G13305.1 AAGGGCTAGAGTTTTAACTTTTAATTTTTTATATTTAAATG 64 13 57 1005 0.876923077 1.45484486 0.076923077 0.276595745 0.476923077 34 7 1 57 chr6:21597814-21597855 minimal NA NA AUUUA UAUU minimal chr6 + 21598393 21598415 3'utr SOX4 Ensembl G13307.1 ACTATTTAATCCTTTCTACTTG 18 4 15 181 0.789473684 0.875061263 0.578947368 0.363636364 0.631578947 7 3 1 15 chr6:21598393-21598415 minimal NA NA AUUUA UAUU minimal chr6 + 23450892 23450913 NoAnnotation G13309.1 TCTGGAATTTAGGACGTGAAT 4 2 4 21 1 0.602059991 0 0.5 0.75 1 0 0 4 chr6:23450892-23450913 minimal NA NA AUUUA NA minimal chr1 - 94354274 94354295 3'utr GCLM Ensembl G1331.1 CAATATATTTTTCCTTTATTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr1:94354274-94354295 minimal NA NA NA UAUU minimal chr6 + 26174312 26174358 NoAnnotation G13318.1 AATACTAAACTTCCTTCTATTCTTAGAATAAACCCTATATAATCAG 6 2 6 49 1 0.77815125 0.166666667 0.25 0.5 3 0 0 6 chr6:26174312-26174358 NA NA NA NA UAUU minimal chr6 + 26175010 26175033 NoAnnotation G13319.1 TCATTCTTTATATCTCCCTTTTT 4 2 4 52 1 0.602059991 0.5 1 1 0 0 0 4 chr6:26175010-26175033 minimal NA NA NA NA NA chr6 + 26175464 26175488 NoAnnotation G13320.1 TTTTATTATTCTATTTTTTATTTC 7 4 5 116 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr6:26175464-26175488 minimal NA NA NA UAUU minimal chr6 + 26546697 26546719 3'utr HMGN4 Ensembl G13325.1 CCTCTTTCATAAATTAAATTTT 4 2 3 39 0.75 0.477121255 0.25 0 0 4 1 0 3 chr6:26546697-26546719 NA NA NA NA NA NA chr6 + 27684087 27684110 repeat LTR-MLT2B4 RepeatMasker G13330.1 TTTTCTCTTACACTAAACTATTG 3 3 3 27 1 0.477121255 0.666666667 0 0 3 0 0 3 chr6:27684087-27684110 NA NA NA NA UAUU minimal chr6 + 28122330 28122351 3'utr ZNF192 Ensembl G13334.1 CATTTTTTTATTCTAATATTC 3 2 2 37 1 0.477121255 0.333333333 0 0 3 0 0 3 chr6:28122330-28122351 minimal NA NA NA UAUU minimal chr6 + 28123223 28123247 3'utr ZNF192 Ensembl G13335.1 AACACTCTTAGAATTCCCATTTAA 3 2 2 19 1 0.477121255 0 0 0 3 0 0 3 chr6:28123223-28123247 minimal NA NA AUUUA NA minimal chr6 + 28125919 28125940 NoAnnotation G13337.1 ATCTAATTTATATTTTATATT 4 2 4 48 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr6:28125919-28125940 minimal NA NA AUUUA UAUU minimal chr6 + 28126072 28126098 NoAnnotation G13338.1 CTTCATTTTCTATACTCCTATTTATC 5 2 2 51 0.8 0.602059991 0.4 0.25 0.4 3 1 0 4 chr6:28126072-28126098 minimal NA NA AUUUA UAUU minimal chr6 + 28133820 28133841 lincRNA AL022393.5 Ensembl G13339.1 AACTATATATTATTTTTATAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr6:28133820-28133841 minimal NA NA NA UAUU minimal chr6 + 28201169 28201199 repeat Low_complexity-AT_rich RepeatMasker G13340.1 TCCCTCTTATTTATAATTTATTTATTTTTT 10 7 10 146 1 1 0 0.25 0.4 6 0 0 10 chr6:28201169-28201199 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 28574984 28575007 tRNA tRNA-tRNA-Ala-GCY_ RepeatMasker G13342.1 TTCAATCCCCGGCACCTCCACCA 19 2 2 52 0.086956522 -0.397940009 0 0.222222222 0.695652174 7 17 4 2 chr6:28574984-28575007 NA NA NA NA NA NA chr6 + 30037514 30037537 3'utr PPP1R11 Ensembl G13350.1 CTATCCCACTAAAATATTTAATC 4 2 4 28 1 0.602059991 0 0 0 4 0 0 4 chr6:30037514-30037537 minimal NA NA AUUUA UAUU minimal chr6 + 30692905 30692928 3'utr TUBB Ensembl G13359.1 TCTTCTTAATCCCCACCTTTTCT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr6:30692905-30692928 NA NA NA NA NA NA chr6 + 31797786 31797809 3'utr HSPA1B Ensembl G13368.1 TAATTAGCTGGCTTCATTATTTT 4 2 2 39 0.75 0.477121255 0 0 0 4 1 0 3 chr6:31797786-31797809 minimal NA NA NA UAUU minimal chr6 + 31797983 31798003 repeat Low_complexity-AT_rich RepeatMasker G13370.1 TTTTTATAATTTGTTTATTT 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr6:31797983-31798003 minimal NA NA NA UAUU minimal chr6 + 31807440 31807472 3'utr C6orf48 Ensembl G13375.1 GGGGCACTTCAAGTAGATAGCTTCTATTTCCT 20 3 18 142 0.95 1.278753601 0 0.333333333 0.6 8 1 0 19 chr6:31807440-31807472 NA NA NA NA UAUU minimal chr6 + 33384106 33384132 repeat Low_complexity-AT_rich RepeatMasker G13381.1 CTTTTTAAATATTTTTTAAAATTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr6:33384106-33384132 minimal NA NA NA UAUU minimal chr6 + 35058281 35058301 3'utr ANKS1A Ensembl G13389.1 CTATATCATCTTTATTTATT 14 5 10 158 0.714285714 1 0 0.5 0.714285714 4 4 0 10 chr6:35058281-35058301 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 42048516 42048540 3'utr TAF8 Ensembl G13405.1 TATTTATAAATTTCTATTTTTTAT 13 5 9 188 0.692307692 0.954242509 0 0.181818182 0.307692308 9 4 0 9 chr6:42048516-42048540 minimal NA NA AUUUA UAUU minimal chr6 + 42508745 42508768 NoAnnotation G13406.1 TATCTGGTTGATCCTGCTAGTAG 505 2 505 4016 1 2.703291378 1 0.8 0.998019802 1 0 0 505 chr6:42508745-42508768 NA NA NA NA NA NA chr6 + 42834484 42834506 3'utr KIAA0240 Ensembl G13409.1 CTTTATTTATTTTTATTTCTTG 2 2 2 30 1 0.301029996 1 0 0 2 0 0 2 chr6:42834484-42834506 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 43555820 43555842 intron POLH Ensembl G13412.1 CTTAATTTATATTATTATAACT 4 3 4 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:43555820-43555842 minimal NA NA AUUUA UAUU minimal chr6 + 43557261 43557283 intron POLH Ensembl G13413.1 ATTTACTTATTTATAATCTTTG 3 2 3 36 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr6:43557261-43557283 UUAUUUAU NA NA AUUUA UAUU minimal chr6 + 43557678 43557700 intron POLH Ensembl G13415.1 AATTCATTTTTATTTACTTTAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:43557678-43557700 minimal NA NA AUUUA UAUU minimal chr6 + 43753526 43753556 3'utr VEGFA Ensembl G13419.1 TACTTATTTAATATCCCTTTTTAATTAGAA 11 5 11 138 0.785714286 0.439332694 0.285714286 0.076923077 0.142857143 12 0 3 11 chr6:43753526-43753556 minimal NA NA AUUUA UAUU minimal chr1 - 100564245 100564273 intron SASS6 Ensembl G1342.1 TACTATAATTAACTAATACTCTATTTAT 4 2 3 47 0.75 0.477121255 0 0 0 4 1 0 3 chr1:100564245-100564273 minimal NA NA AUUUA UAUU minimal chr6 + 43753608 43753634 3'utr VEGFA Ensembl G13420.1 TTAATATTTAATTTCAACTATTTATG 19 7 18 226 0.947368421 1.255272505 0.368421053 0.2 0.368421053 12 1 0 18 chr6:43753608-43753634 minimal NA NA AUUUA UAUU minimal chr6 + 43753827 43753860 3'utr VEGFA Ensembl G13421.1 TTTCAATATACATCTACATACTATATATATATT 8 5 8 83 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr6:43753827-43753860 NA NA NA NA UAUU minimal chr6 + 44418108 44418129 3'utr CDC5L Ensembl G13431.1 TTACCTATTTTTAAATTTAAG 3 2 2 29 0.666666667 0.301029996 1 0 0 3 1 0 2 chr6:44418108-44418129 minimal NA NA AUUUA UAUU minimal chr6 + 49519900 49519928 repeat Low_complexity-AT_rich RepeatMasker G13441.1 CATTTATCATACATTTTAATTTTAATAT 6 4 6 70 1 0.77815125 0 0 0 6 0 0 6 chr6:49519900-49519928 minimal NA NA AUUUA NA minimal chr1 - 100659541 100659563 NoAnnotation G1345.1 CATATCTACTATTTTATTATTT 8 4 6 92 0.666666667 0.477121255 0 0.125 0.222222222 7 2 1 6 chr1:100659541-100659563 minimal NA NA NA UAUU minimal chr6 + 56968611 56968634 3'utr ZNF451 Ensembl G13454.1 CCACACTTTTTAATAATCTATTG 6 2 5 55 0.833333333 0.698970004 0.333333333 0.25 0.5 3 1 0 5 chr6:56968611-56968634 NA NA NA NA UAUU minimal chr6 + 56968873 56968896 3'utr ZNF451 Ensembl G13455.1 TTAATATTTATCTTATTTTTCTG 3 3 3 41 1 0.477121255 0.333333333 0 0 3 0 0 3 chr6:56968873-56968896 minimal NA NA AUUUA UAUU minimal chr6 + 56968896 56968919 3'utr ZNF451 Ensembl G13456.1 TATTTTACTCAAAATTTTATTTC 8 3 5 98 0.625 0.698970004 0 0.333333333 0.5 4 3 0 5 chr6:56968896-56968919 minimal NA NA NA UAUU minimal chr6 + 56970385 56970407 3'utr ZNF451 Ensembl G13458.1 TATACCTCCCTCCCCCTTATTT 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:56970385-56970407 minimal NA NA NA UAUU minimal chr1 - 100660964 100660984 3'utr DBT Ensembl G1346.1 CTTATTTATATTAATTAATG 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr1:100660964-100660984 UUAUUUAU NA NA AUUUA UAUU minimal chr6 + 56971686 56971707 3'utr ZNF451 Ensembl G13461.1 CAAATCTTTTTATTATTTTTC 4 2 4 48 1 0.602059991 0.5 1 1 0 0 0 4 chr6:56971686-56971707 minimal NA NA NA UAUU minimal chr6 + 56971781 56971805 3'utr ZNF451 Ensembl G13463.1 TTTTATTAAATCTTCTCTTATTAG 3 3 3 36 1 0.477121255 0.333333333 0 0 3 0 0 3 chr6:56971781-56971805 minimal NA NA NA UAUU minimal chr6 + 57034090 57034113 3'utr ZNF451 Ensembl G13464.1 AATAATCTTCCTTAACTCTTTAA 4 3 3 36 0.75 0.477121255 0 0 0 4 1 0 3 chr6:57034090-57034113 NA NA NA NA NA NA chr6 + 57034179 57034206 3'utr ZNF451 Ensembl G13465.1 TATTACATATTTAATTCTTAAATATTG 5 4 5 56 0.833333333 0.397940009 0.166666667 0 0 6 0 1 5 chr6:57034179-57034206 minimal NA NA AUUUA UAUU minimal chr6 + 57049161 57049182 3'utr BAG2 Ensembl G13466.1 CAATATTTTAATTATCTATCT 9 5 9 88 1 0.954242509 0.111111111 0.142857143 0.333333333 6 0 0 9 chr6:57049161-57049182 minimal NA NA NA UAUU minimal chr6 + 64286728 64286751 5'utr PTP4A1 Ensembl G13475.1 TATTCAATTTTTTTAATTATTTC 43 10 29 587 0.674418605 1.462397998 0 0.555555556 0.813953488 8 14 0 29 chr6:64286728-64286751 minimal NA NA NA UAUU minimal chr6 + 64290907 64290933 repeat Low_complexity-AT_rich RepeatMasker G13476.1 CTCTTTAATTTAGTAAAATATTTTTT 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:64290907-64290933 minimal NA NA AUUUA UAUU minimal chr6 + 64290985 64291007 3'utr PTP4A1 Ensembl G13477.1 TAATTTTTTTCCCATACTTATC 5 4 5 55 1 0.698970004 0 0 0 5 0 0 5 chr6:64290985-64291007 minimal NA NA NA NA NA chr6 + 64291192 64291228 3'utr PTP4A1 Ensembl G13478.1 ATAAAATGGTGATGTGTATTAATGTTAGTTCAACCA 6 2 6 43 1 0.77815125 0.166666667 0.666666667 0.833333333 1 0 0 6 chr6:64291192-64291228 NA NA NA NA UAUU minimal chr6 + 64291704 64291726 repeat SINE-MIRb RepeatMasker G13480.1 CAAATTAATAATTACATACCTT 4 3 3 28 0.75 0.477121255 0.25 0 0 4 1 0 3 chr6:64291704-64291726 NA NA NA NA NA NA chr6 + 64291737 64291762 3'utr PTP4A1 Ensembl G13481.1 AAATTAATTTAAATATTAGTATTTG 10 2 10 88 1 1 0.1 0.142857143 0.4 6 0 0 10 chr6:64291737-64291762 minimal NA NA AUUUA UAUU minimal chr6 + 64292299 64292322 3'utr PTP4A1 Ensembl G13483.1 CTAAAAATAAATTAATTTACTTT 6 3 6 50 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr6:64292299-64292322 minimal NA NA AUUUA NA minimal chr6 + 71161466 71161486 intron FAM135A Ensembl G13497.1 TATATATCTAAACTTATCCC 3 2 2 22 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:71161466-71161486 minimal NA NA NA NA NA chr6 + 71192281 71192302 intron FAM135A Ensembl G13499.1 ATCTCAAATTCCTTTTATATT 3 3 3 29 1 0.477121255 0.333333333 0 0 3 0 0 3 chr6:71192281-71192302 minimal NA NA NA UAUU minimal chr6 + 71277359 71277383 intron C6orf57 Ensembl G13503.1 CAAAACATAATTTTATTTATTTAT 4 3 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr6:71277359-71277383 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 71449793 71449814 intron SMAP1 Ensembl G13506.1 CTATTATTCTTACTCCTTTTA 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:71449793-71449814 minimal NA NA NA UAUU minimal chr6 + 71491394 71491415 intron SMAP1 Ensembl G13507.1 GTGGTAGTAGCAAATATTTCA 3 2 3 18 1 0.477121255 0 0 0 3 0 0 3 chr6:71491394-71491415 NA NA NA NA UAUU minimal chr6 + 73584143 73584164 intron KCNQ5 Ensembl G13512.1 TCTATCTACATAAATATTTAT 4 2 2 38 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr6:73584143-73584164 minimal NA NA AUUUA UAUU minimal chr6 + 76328530 76328553 intron SENP6 Ensembl G13517.1 TTTCCATCATCTACTATTTATTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:76328530-76328553 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 80751402 80751430 repeat Low_complexity-AT_rich RepeatMasker G13531.1 ATTTTAATATATATCTAATTATTATATT 4 3 4 60 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:80751402-80751430 minimal NA NA NA UAUU minimal chr6 + 80766417 80766443 repeat SINE-MIRb RepeatMasker G13532.1 TTCATAATTATTTAATATCTAATATT 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr6:80766417-80766443 minimal NA NA AUUUA UAUU minimal chr6 + 84567163 84567192 repeat Low_complexity-AT_rich RepeatMasker G13539.1 CAAATGTATCATAATTATTTTAAACTAAT 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr6:84567163-84567192 minimal NA NA NA UAUU minimal chr6 + 87899097 87899121 intron ZNF292 Ensembl G13542.1 ATCCAATATTCATATATTATTATT 3 2 3 33 1 0.477121255 0 0 0 3 0 0 3 chr6:87899097-87899121 minimal NA NA NA UAUU minimal chr6 + 87972848 87972874 3'utr ZNF292 Ensembl G13548.1 TTTAGCTTTATTCACCATATTTATAC 8 5 8 75 1 0.903089987 0.125 0.142857143 0.25 6 0 0 8 chr6:87972848-87972874 minimal NA NA AUUUA UAUU minimal chr6 + 88000905 88000927 NoAnnotation G13549.1 TTAAACTTTAATTATTTTAATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr6:88000905-88000927 minimal NA NA NA UAUU minimal chr6 + 90548581 90548601 NoAnnotation G13557.1 CTGGTTATATTTTTATTTAT 3 2 2 36 1 0.477121255 0 0 0 3 0 0 3 chr6:90548581-90548601 UUAUUUAU NA NA AUUUA UAUU minimal chr6 + 90571806 90571830 repeat Low_complexity-AT_rich RepeatMasker G13559.1 CTAAATATAATTTAACTTTTTTTT 8 2 2 105 0.25 0.301029996 0 0.142857143 0.25 6 6 0 2 chr6:90571806-90571830 minimal NA NA AUUUA NA minimal chr6 + 90583740 90583771 NoAnnotation G13561.1 TCAAAATATTTATTTTTAAACATGTTAGAAC 7 3 7 77 1 0.84509804 0.142857143 0.166666667 0.285714286 5 0 0 7 chr6:90583740-90583771 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 96035094 96035117 3'utr MANEA Ensembl G13568.1 ATTTCTAATTTAATTCACTTTCT 2 2 2 13 1 0.301029996 0.5 0 0 2 0 0 2 chr6:96035094-96035117 minimal NA NA AUUUA NA minimal chr1 - 108677993 108678015 3'utr SLC25A24 Ensembl G1357.1 TTCTTAAACTCATTTCACTTCT 4 2 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:108677993-108678015 NA NA NA NA NA NA chr6 + 97002414 97002436 3'utr KIAA0776 Ensembl G13571.1 CAACAACTTACTTACTATTTAT 6 3 5 48 0.714285714 0.397940009 0 0.2 0.428571429 4 1 1 5 chr6:97002414-97002436 minimal NA NA AUUUA UAUU minimal chr6 + 105528517 105528562 3'utr LIN28B Ensembl G13593.1 TACTTCCTTGCCTTATGTGAGGATTTCAAACTTATTTAAATTATG 4 3 4 38 1 0.602059991 0.25 0 0 4 0 0 4 chr6:105528517-105528562 minimal NA NA AUUUA UAUU minimal chr6 + 107964583 107964603 intron SOBP Ensembl G13596.1 CTCATACTTTAAATATTTAT 4 2 2 38 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr6:107964583-107964603 minimal NA NA AUUUA UAUU minimal chr1 + 38485453 38485473 repeat Low_complexity-AT_rich RepeatMasker G136.1 CCTAAAATAATTATTTATTT 3 3 3 27 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:38485453-38485473 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 110551378 110551403 repeat Low_complexity-AT_rich RepeatMasker G13605.1 TCATATTTATATTTAATTATTAAAT 12 5 12 143 1 1.079181246 0 0.25 0.5 6 0 0 12 chr6:110551378-110551403 minimal NA NA AUUUA UAUU minimal chr6 + 111215527 111215549 3'utr AMD1 Ensembl G13606.1 TTTATATACTAATTCTATACCC 8 3 6 74 0.75 0.77815125 0 0.6 0.75 2 2 0 6 chr6:111215527-111215549 minimal NA NA NA NA NA chr6 + 111215764 111215785 3'utr AMD1 Ensembl G13608.1 CACCCCTTTACTAACTTAGTA 11 2 11 66 1 1.041392685 0.272727273 0.75 0.909090909 1 0 0 11 chr6:111215764-111215785 NA NA NA NA NA NA chr6 + 111215789 111215813 3'utr AMD1 Ensembl G13609.1 TATAAAATCATTTTTATTTAGTTA 12 3 11 134 0.916666667 1.041392685 0.333333333 0.25 0.5 6 1 0 11 chr6:111215789-111215813 minimal NA NA AUUUA UAUU minimal chr1 - 109512998 109513022 3'utr WDR47 Ensembl G1361.1 TAATTTTACTTTAAATTATTTAAA 5 2 4 59 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:109512998-109513022 minimal NA NA AUUUA UAUU minimal chr6 + 111346869 111346890 3'utr RPF2 Ensembl G13611.1 ATCTTATTATATATTTTTATA 5 3 3 62 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr6:111346869-111346890 minimal NA NA NA UAUU minimal chr6 + 111596942 111596963 NoAnnotation G13616.1 CTTTTCCAATAAAAATTATTT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:111596942-111596963 minimal NA NA NA UAUU minimal chr6 + 117055647 117055670 3'utr KPNA5 Ensembl G13633.1 TTTTATTTATTTCCTTAAATATA 4 3 4 51 1 0.602059991 0 0 0 4 0 0 4 chr6:117055647-117055670 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 118015750 118015770 intron NUS1 Ensembl G13635.1 ATTCCTTTTTAATTATTCTT 4 2 2 50 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:118015750-118015770 minimal NA NA NA UAUU minimal chr6 + 119229017 119229040 3'utr ASF1A Ensembl G13640.1 CATATATATTATTTTCTTCTCCT 4 2 3 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:119229017-119229040 minimal NA NA NA UAUU minimal chr6 + 119230004 119230026 3'utr ASF1A Ensembl G13641.1 CCTTCATATCTAAAACTTTTAT 4 2 4 34 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:119230004-119230026 minimal NA NA NA NA NA chr6 + 121770563 121770593 3'utr GJA1 Ensembl G13643.1 ATTCAGTAGTACACATACAACTAATTTATT 7 2 5 49 0.625 0.397940009 0 0.333333333 0.5 4 2 1 5 chr6:121770563-121770593 minimal NA NA AUUUA UAUU minimal chr6 + 122748023 122748045 intron HSF2 Ensembl G13646.1 TATATAACTTATTCAACTTAGA 5 2 5 40 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr6:122748023-122748045 minimal NA NA NA UAUU minimal chr6 + 125413096 125413118 3'utr RNF217 Ensembl G13656.1 TATCATAATATATAATTCAACT 3 2 2 24 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:125413096-125413118 NA NA NA NA NA NA chr6 + 126081865 126081886 3'utr HEY2 Ensembl G13659.1 ACTATTTTTATATATTTATCC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr6:126081865-126081886 minimal NA NA AUUUA UAUU minimal chr6 + 126360166 126360195 3'utr TRMT11 Ensembl G13663.1 TATTACAGTCTTTATAATCTTATTTAATG 12 5 12 133 1 1.079181246 0.75 0.666666667 0.833333333 2 0 0 12 chr6:126360166-126360195 minimal NA NA AUUUA UAUU minimal chr6 + 126669719 126669743 NoAnnotation G13671.1 TTAATATGGGATTATTAAATATTG 8 4 8 69 1 0.903089987 0.125 0.333333333 0.5 4 0 0 8 chr6:126669719-126669743 minimal NA NA NA UAUU minimal chr6 + 133645427 133645450 intron EYA4 Ensembl G13693.1 TATCCATAATTACAATATTTATT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:133645427-133645450 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 133852086 133852109 3'utr EYA4 Ensembl G13695.1 CACTAAAACCTTAAATATTTATT 9 5 8 66 0.888888889 0.903089987 0 0.285714286 0.444444444 5 1 0 8 chr6:133852086-133852109 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 38489491 38489520 3'utr UTP11L Ensembl G137.1 AAATTAGTCTTATTTTTATATACTTAATT 4 2 3 55 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:38489491-38489520 minimal NA NA NA UAUU minimal chr6 + 138203435 138203456 3'utr TNFAIP3 Ensembl G13704.1 TAATTCACTTTATTTATTTTA 7 4 7 84 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr6:138203435-138203456 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 138973671 138973691 NoAnnotation G13708.1 TCCATTCATATCATTTTTTA 4 2 4 40 1 0.602059991 0 1 1 0 0 0 4 chr6:138973671-138973691 NA NA NA NA NA NA chr6 + 139364220 139364244 3'utr C6orf115 Ensembl G13709.1 CTATAAAATAAATCCTATTATTTT 8 3 8 73 0.888888889 0.602059991 0 0.333333333 0.555555556 4 0 1 8 chr6:139364220-139364244 minimal NA NA NA UAUU minimal chr6 + 139501029 139501067 repeat Low_complexity-AT_rich RepeatMasker G13713.1 ATTTTTCGTCTATTCTTAATATTTTTTAATTATTTATT 8 4 8 129 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr6:139501029-139501067 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 111201459 111201479 NoAnnotation G1372.1 TTTAATATTCTATCTTAATT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr1:111201459-111201479 NA NA NA NA UAUU minimal chr6 + 144184842 144184866 repeat Low_complexity-AT_rich RepeatMasker G13723.1 TAATACTTTAATTTTTAATATTAT 25 9 23 296 0.92 1.361727836 0 0.235294118 0.48 13 2 0 23 chr6:144184842-144184866 minimal NA NA NA UAUU minimal chr6 + 145470714 145470738 repeat Low_complexity-AT_rich RepeatMasker G13725.1 TCTCCTATAATCCTATATTTATTA 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:145470714-145470738 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 149708642 149708663 intron TAB2 Ensembl G13734.1 TAATTATTTTATTATTAAATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:149708642-149708663 minimal NA NA NA UAUU minimal chr6 + 149731536 149731559 3'utr TAB2 Ensembl G13735.1 ATTATTTTCTTATATTTCTATAT 17 7 13 229 0.764705882 1.113943352 0.176470588 0.333333333 0.529411765 8 4 0 13 chr6:149731536-149731559 minimal NA NA NA UAUU minimal chr6 + 149731573 149731608 3'utr TAB2 Ensembl G13736.1 CCTTTTGTTAACTAATTTTCTTTTTTCCTTTTAGT 10 3 9 149 0.9 0.954242509 0.2 0.5 0.7 3 1 0 9 chr6:149731573-149731608 NA NA NA NA NA NA chr6 + 149912653 149912673 3'utr C6orf72 Ensembl G13737.1 CACTTTATAAAATTCTAATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:149912653-149912673 minimal NA NA NA NA NA chr6 + 149912680 149912708 3'utr C6orf72 Ensembl G13738.1 TCAAGAACTTAACACTTATTTTTTTATT 6 3 4 69 0.666666667 0.602059991 0 0 0 6 2 0 4 chr6:149912680-149912708 minimal NA NA NA UAUU minimal chr6 + 150078525 150078551 repeat LINE-L3 RepeatMasker G13739.1 TTACAAAAATATTTTTATTAATATTA 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:150078525-150078551 minimal NA NA NA UAUU minimal chr6 + 151790922 151790943 3'utr C6orf211 Ensembl G13748.1 TAATATCTTTTATATTCTATT 4 2 3 48 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr6:151790922-151790943 minimal NA NA NA UAUU minimal chr6 + 155136721 155136746 repeat Low_complexity-AT_rich RepeatMasker G13759.1 ACAATTATTTTTAAATATATTATCT 5 3 5 56 1 0.698970004 0 0.25 0.4 3 0 0 5 chr6:155136721-155136746 minimal NA NA NA UAUU minimal chr6 + 157224306 157224331 intron ARID1B Ensembl G13765.1 TTATTTAATATCTTTCATATTTAAA 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr6:157224306-157224331 minimal NA NA AUUUA UAUU minimal chr6 + 158929809 158929835 3'utr TULP4 Ensembl G13774.1 TTATACCCATTTTATTTATTTAGAAA 15 2 15 165 1 1.176091259 0.066666667 0.625 0.8 3 0 0 15 chr6:158929809-158929835 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 + 160526478 160526505 3'utr IGF2R Ensembl G13777.1 CATTTTAATTCTCTCCCCCTATTTATT 5 3 5 61 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr6:160526478-160526505 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 + 161413808 161413837 intron MAP3K4 Ensembl G13779.1 CTTTTTCTTCCATACTCTATTAACTTATT 4 3 4 53 1 0.602059991 0 0 0 4 0 0 4 chr6:161413808-161413837 minimal NA NA NA UAUU minimal chr1 - 111490120 111490144 3'utr LRIF1 Ensembl G1378.1 CTTTATCTCTTTACCCTTAAAATG 5 3 4 48 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:111490120-111490144 minimal NA NA NA NA NA chr6 + 161481326 161481347 intron MAP3K4 Ensembl G13783.1 ATTCTTTACCTTTTATTTACT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:161481326-161481347 minimal NA NA AUUUA UAUU minimal chr1 - 111490326 111490353 3'utr LRIF1 Ensembl G1379.1 ATAAATTTTATATTTTTCTATTATTTT 6 4 6 87 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:111490326-111490353 minimal NA NA NA UAUU minimal chr6 + 163986832 163986854 3'utr QKI Ensembl G13790.1 TCACATCTCACATTAAATTATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:163986832-163986854 minimal NA NA NA UAUU minimal chr6 + 163988004 163988032 3'utr QKI Ensembl G13792.1 TTTTTTCTCCCTTCATATTTTAACTTAT 6 5 6 85 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr6:163988004-163988032 minimal NA NA NA UAUU minimal chr6 + 163990868 163990889 3'utr QKI Ensembl G13794.1 TATCAATTAGAAATTTCTTCT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:163990868-163990889 NA NA NA NA NA NA chr6 + 163994286 163994309 3'utr QKI Ensembl G13795.1 AATTTATTTCTTATTAAAATATG 5 3 4 55 0.8 0.602059991 0.4 0 0 5 1 0 4 chr6:163994286-163994309 minimal NA NA AUUUA UAUU minimal chr6 + 169801042 169801071 NoAnnotation G13802.1 ATTCTAATTTCATTTTATTAATTATTATT 8 4 5 106 0.625 0.698970004 0 0.142857143 0.25 6 3 0 5 chr6:169801042-169801071 minimal NA NA NA UAUU minimal chr6 + 170715675 170715695 3'utr FAM120B Ensembl G13805.1 AACATTTACATCTAATTATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr6:170715675-170715695 minimal NA NA AUUUA UAUU minimal chr6 + 170871397 170871417 intron TBP Ensembl G13806.1 ATCCTTTTATTAAGGGAGGG 5 2 5 30 1 0.698970004 1 1 1 0 0 0 5 chr6:170871397-170871417 minimal NA NA NA UAUU minimal chr6 - 679154 679182 intron EXOC2 Ensembl G13811.1 CTTTCAAATTTCTTATCTTTTATTTATT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr6:679154-679182 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 3663292 3663319 NoAnnotation G13819.1 CAACCTAATTATTTTTCATTAACTTTT 5 3 5 49 1 0.698970004 0 0.25 0.4 3 0 0 5 chr6:3663292-3663319 minimal NA NA NA UAUU minimal chr6 - 10397658 10397709 3'utr TFAP2A Ensembl G13828.1 TAAAATAAAATTTTATCTATAATTAGTATTATTACATTTAGCTTTTCATTG 8 4 8 100 1 0.903089987 0 0 0 8 0 0 8 chr6:10397658-10397709 minimal NA NA AUUUA UAUU minimal chr6 - 10409276 10409297 intron TFAP2A Ensembl G13831.1 CTTCAATTCTATATATTTATG 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:10409276-10409297 minimal NA NA AUUUA UAUU minimal chr6 - 13305190 13305212 3'utr TBC1D7 Ensembl G13835.1 TTTTCCCCCAATAAAATTATTT 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:13305190-13305212 minimal NA NA NA UAUU minimal chr6 - 13358526 13358550 3'utr GFOD1 Ensembl G13837.1 TAAAACCAAACTTATATATATAAG 3 3 3 18 1 0.477121255 0 0 0 3 0 0 3 chr6:13358526-13358550 minimal NA NA NA NA NA chr6 - 13684980 13685009 repeat LINE-L2c RepeatMasker G13838.1 CATTTAATCACCTTCATAATTATTTATTT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr6:13684980-13685009 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 17615674 17615696 3'utr NUP153 Ensembl G13848.1 CCTTTTTCATTATTTTATTATG 8 4 7 104 0.875 0.84509804 0 0.333333333 0.5 4 1 0 7 chr6:17615674-17615696 minimal NA NA NA UAUU minimal chr6 - 17615697 17615733 3'utr NUP153 Ensembl G13849.1 CTATTTCTATATTTTCATTCTCCTATCACCTGTCTT 16 9 16 203 1 1.204119983 0 0.363636364 0.5625 7 0 0 16 chr6:17615697-17615733 NA NA NA NA UAUU minimal chr6 - 17615733 17615759 3'utr NUP153 Ensembl G13850.1 TTCACTCTCCATTTAATAATTATATG 20 8 20 180 1 1.301029996 0 0.117647059 0.25 15 0 0 20 chr6:17615733-17615759 minimal NA NA AUUUA NA minimal chr6 - 17624296 17624319 intron NUP153 Ensembl G13851.1 TATTATAATCCTATATTTTCTTA 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr6:17624296-17624319 minimal NA NA NA UAUU minimal chr6 - 17640767 17640797 intron NUP153 Ensembl G13852.1 TAACCATATACCCTTATTTAATATTTTACC 4 2 4 46 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr6:17640767-17640797 minimal NA NA AUUUA UAUU minimal chr6 - 17660765 17660787 intron NUP153 Ensembl G13854.1 TATATATAATTTATTATTAGAA 24 2 24 238 1 1.380211242 0 0.333333333 0.833333333 4 0 0 24 chr6:17660765-17660787 minimal NA NA AUUUA UAUU minimal chr6 - 17697366 17697387 intron NUP153 Ensembl G13856.1 AACTTAAATTTATTATTTATG 7 3 7 70 1 0.84509804 0 0.666666667 0.857142857 1 0 0 7 chr6:17697366-17697387 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 17722015 17722042 rRNA 5S_rRNA Ensembl G13857.1 CCTGGGAATACCGGGTGCTGTAGACTT 36 2 2 224 0.045454545 -0.653212514 0.068181818 0.210526316 0.659090909 15 34 8 2 chr6:17722015-17722042 NA NA NA NA NA NA chr6 - 18225539 18225559 3'utr DEK Ensembl G13858.1 ATTGTAGTATTTAGTATATG 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:18225539-18225559 minimal NA NA AUUUA UAUU minimal chr1 - 113455129 113455153 3'utr SLC16A1 Ensembl G1386.1 AAAACTGTAAATATTTTTTTAACC 8 2 5 75 0.625 0.698970004 0 0.666666667 0.875 1 3 0 5 chr1:113455129-113455153 NA NA NA NA UAUU minimal chr6 - 24710301 24710325 intron C6orf62 Ensembl G13868.1 ATCATACTAATAATTTAATATTTG 5 2 2 52 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr6:24710301-24710325 minimal NA NA AUUUA UAUU minimal chr6 - 24713577 24713600 intron C6orf62 Ensembl G13869.1 CTCTAATAATTATCATTTTTAAT 5 2 5 51 1 0.698970004 0 0.5 0.8 1 0 0 5 chr6:24713577-24713600 minimal NA NA NA NA NA chr6 - 27112868 27112893 intron HIST1H2BK Ensembl G13879.1 TATCAACAAATAATTATATTTATTG 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:27112868-27112893 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 27559634 27559665 tRNA tRNA-tRNA-Lys-AAA RepeatMasker G13883.1 GCCTGGATAGCTCAGTCGGTAGAGCATCAGA 8 2 2 46 0.222222222 0 0.888888889 0.166666667 0.444444444 5 6 1 2 chr6:27559634-27559665 NA NA NA NA NA NA chr6 - 27801961 27801984 NoAnnotation G13887.1 CTTCATAATTTATTTATTTATTT 4 2 2 56 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr6:27801961-27801984 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 28192780 28192808 NoAnnotation G13891.1 CATTTTTAAAATTAATACATTATTTATG 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr6:28192780-28192808 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 28346660 28346686 NoAnnotation G13893.1 TTTTTTTTAACTCTATTACTATTATA 8 5 8 111 0.888888889 0.602059991 0 0 0 9 0 1 8 chr6:28346660-28346686 minimal NA NA NA UAUU minimal chr6 - 28389862 28389891 NoAnnotation G13896.1 TTTCACTTACAACTCTACTCATATCCCAT 5 2 4 45 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr6:28389862-28389891 NA NA NA NA NA NA chr6 - 28390585 28390608 NoAnnotation G13897.1 CATACCTTTCATTTAATCTCTAT 4 3 3 38 0.75 0.477121255 0 0 0 4 1 0 3 chr6:28390585-28390608 minimal NA NA AUUUA NA minimal chr1 + 38489889 38489916 3'utr UTP11L Ensembl G139.1 CTTATTCAATAATAACAAATATTTATT 15 4 13 155 0.722222222 0.511883361 0.055555556 0.230769231 0.444444444 10 2 3 13 chr1:38489889-38489916 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 29920917 29920940 NoAnnotation G13906.1 CCATTATTTATTTATTTAGTTAG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr6:29920917-29920940 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 30568867 30568897 3'utr PPP1R10 Ensembl G13910.1 CTAAGTTCATTATTCCTCATGGGGTGGGGA 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:30568867-30568897 minimal NA NA NA UAUU minimal chr6 - 30620960 30620988 3'utr DHX16 Ensembl G13911.1 CTCCTTTTCCTTCTATACATTATTTAAT 5 5 5 65 1 0.698970004 0 0 0 5 0 0 5 chr6:30620960-30620988 minimal NA NA AUUUA UAUU minimal chr6 - 30667930 30667962 3'utr MDC1 Ensembl G13912.1 TATTAAATGGCCATTTTAAAATTAGCTAGTTT 28 2 28 265 1 1.447158031 0 0.555555556 0.857142857 4 0 0 28 chr6:30667930-30667962 NA NA NA NA UAUU minimal chr6 - 30668011 30668048 3'utr MDC1 Ensembl G13913.1 TTTTTTTAATGGCCATTTTATTTTATTTGTATTTATA 11 7 10 172 0.909090909 1 0 0 0 11 1 0 10 chr6:30668011-30668048 minimal NA NA AUUUA UAUU minimal chr6 - 30711377 30711397 3'utr IER3 Ensembl G13915.1 AATATTTATTTTAACTTATG 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr6:30711377-30711397 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 30711429 30711458 3'utr IER3 Ensembl G13916.1 CTCCTAATTAATATTTATATGTATTTATG 12 5 12 117 1 1.079181246 0 0.222222222 0.416666667 7 0 0 12 chr6:30711429-30711458 minimal NA NA AUUUA UAUU minimal chr6 - 31508727 31508760 intron DDX39B Ensembl G13921.1 TATTTTACCTTTTATTATCTATTCTATTTCCTC 20 7 14 282 0.7 1.146128036 0 0.176470588 0.3 14 6 0 14 chr6:31508727-31508760 minimal NA NA NA UAUU minimal chr1 - 114308260 114308289 3'utr RSBN1 Ensembl G1393.1 TAAATTATTCACTTCCCTTAATTTTATCT 5 3 5 57 1 0.698970004 0 0 0 5 0 0 5 chr1:114308260-114308289 minimal NA NA NA UAUU minimal chr6 - 34256033 34256060 3'utr NUDT3 Ensembl G13934.1 TATACATTTATCTACACATTATATATC 9 6 9 84 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr6:34256033-34256060 minimal NA NA AUUUA NA minimal chr6 - 34373193 34373219 NoAnnotation G13939.1 TTTTAACTTTTATATTTATATTTATG 7 2 3 96 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr6:34373193-34373219 minimal NA NA AUUUA UAUU minimal chr6 - 34387833 34387855 intron RPS10 Ensembl G13941.1 TCTTTTATTTAATCAAATATTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr6:34387833-34387855 minimal NA NA AUUUA UAUU minimal chr6 - 34574001 34574025 intron C6orf106 Ensembl G13943.1 CTCAATTATTTATTCTAAATATTG 12 7 10 126 0.833333333 1 0 0.2 0.333333333 8 2 0 10 chr6:34574001-34574025 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 36823063 36823086 3'utr PPIL1 Ensembl G13952.1 CATCTCTATATATATTTTCCCTC 7 5 6 59 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr6:36823063-36823086 NA NA NA NA UAUU minimal chr6 - 38644286 38644316 3'utr GLO1 Ensembl G13957.1 ATTTCATAATCATTTTTAGTATTTAGATTG 35 3 33 413 0.942857143 1.51851394 0 0.384615385 0.771428571 8 2 0 33 chr6:38644286-38644316 minimal NA NA AUUUA UAUU minimal chr6 - 38644479 38644514 3'utr GLO1 Ensembl G13958.1 TTCAAGGACTAACCTTATTTATTTGGGAAAGGGGA 33 5 13 322 0.342105263 0.335792102 0.026315789 0.285714286 0.605263158 15 20 5 13 chr6:38644479-38644514 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 115090129 115090152 NoAnnotation G1396.1 TTTAACTTTAAGAAGGAGTTAGA 6 2 5 38 0.016666667 -1.770852012 0.003333333 0.571428571 0.97 9 1 294 5 chr1:115090129-115090152 NA NA NA NA NA NA chr6 - 41903031 41903052 3'utr CCND3 Ensembl G13966.1 CTCATTTTAATTTATTAATTG 5 2 4 56 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr6:41903031-41903052 minimal NA NA AUUUA UAUU minimal chr6 - 42166305 42166335 repeat DNA-ORSL RepeatMasker G13968.1 ATAATTATTAATATTTACTTATTTAATATT 4 2 4 53 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:42166305-42166335 minimal NA NA AUUUA UAUU minimal chr6 - 42175832 42175859 3'utr MRPS10 Ensembl G13969.1 AACCACTTTTATCTATTCTTTTTATTC 7 5 6 77 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr6:42175832-42175859 minimal NA NA NA UAUU minimal chr6 - 44221853 44221879 3'utr SLC35B2 Ensembl G13975.1 CTCTTATAATTTTATTTTATTAAATT 20 3 17 270 0.85 1.230448921 0 0.4 0.7 6 3 0 17 chr6:44221853-44221879 minimal NA NA NA UAUU minimal chr6 - 47200141 47200165 3'utr TNFRSF21 Ensembl G13985.1 CACTTTAAATTTACTTAACTTACC 4 2 4 34 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:47200141-47200165 minimal NA NA AUUUA NA minimal chr1 - 115249805 115249838 3'utr NRAS Ensembl G1399.1 ATAATTTCACTTAATAATTTTTACCTAATCTCC 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:115249805-115249838 NA NA NA NA NA NA chr1 - 115250165 115250193 3'utr NRAS Ensembl G1400.1 CTCTATTCTCTAAACTGGCATCTGCTCT 7 3 6 64 0.6 0.176091259 0 0.5 0.7 3 1 3 6 chr1:115250165-115250193 NA NA NA NA UAUU minimal chr6 - 56322877 56322901 3'utr DST Ensembl G14004.1 TATTATATCTATCTATATTTAATA 3 2 2 35 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:56322877-56322901 minimal NA NA AUUUA UAUU minimal chr6 - 56332834 56332864 intron DST Ensembl G14005.1 CTTCAAATTATCTATTACCTTTATTTATTG 3 3 3 45 1 0.477121255 0 0 0 3 0 0 3 chr6:56332834-56332864 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 56386188 56386214 intron DST Ensembl G14006.1 ACACTCATTTAAATACTGTCAGGCTG 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:56386188-56386214 minimal NA NA AUUUA NA minimal chr6 - 56406969 56407009 intron DST Ensembl G14008.1 TAACTTTCTCATAACGTTAGACTTAACTTATTTTTCTCTG 5 2 5 43 1 0.698970004 0 0.25 0.4 3 0 0 5 chr6:56406969-56407009 minimal NA NA NA UAUU minimal chr6 - 57054142 57054185 3'utr RAB23 Ensembl G14014.1 CACAAAAATATTATTATTAGTCTTAACTAAAATTACATATTTT 10 6 10 91 1 1 0 0.111111111 0.2 8 0 0 10 chr6:57054142-57054185 minimal NA NA NA UAUU minimal chr6 - 57054522 57054546 3'utr RAB23 Ensembl G14015.1 CCAAAAATATCATACCTAATTTTT 4 2 3 29 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr6:57054522-57054546 NA NA NA NA NA NA chr6 - 57054646 57054667 3'utr RAB23 Ensembl G14016.1 TACATTCTAATTAATTCACTT 4 2 3 28 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr6:57054646-57054667 NA NA NA NA NA NA chr6 - 74222469 74222496 NoAnnotation G14026.1 CCCTATATATTTTTATTTTATTTATTG 5 3 5 79 1 0.698970004 0 0.25 0.4 3 0 0 5 chr6:74222469-74222496 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 74223879 74223905 repeat SINE-AluJb RepeatMasker G14029.1 ATATATATAATAATAAAAATTAGCTG 3 2 3 22 1 0.477121255 0 0 0 3 0 0 3 chr6:74223879-74223905 NA NA NA NA NA NA chr6 - 74224821 74224846 NoAnnotation G14030.1 TCCTTTTTCTCTTACCTAATTATTG 6 5 6 62 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr6:74224821-74224846 minimal NA NA NA UAUU minimal chr6 - 75964583 75964606 3'utr TMEM30A Ensembl G14040.1 AATTATTTTAATATTCCTTATTG 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr6:75964583-75964606 minimal NA NA NA UAUU minimal chr6 - 75965805 75965831 coding TMEM30A Ensembl G14041.1 ACATTACCATTTAATTTTATATTATG 4 2 3 43 0.75 0.477121255 0 0 0 4 1 0 3 chr6:75965805-75965831 minimal NA NA AUUUA UAUU minimal chr6 - 79647846 79647886 NoAnnotation G14049.1 TAATACCAATATATTTAGATTTTATATTTTTATAATTTAG 3 2 3 33 1 0.477121255 0 0 0 3 0 0 3 chr6:79647846-79647886 minimal NA NA AUUUA UAUU minimal chr1 - 115314665 115314720 3'utr SIKE1 Ensembl G1405.1 TATAACTCTACAAATAGTACCTTATATTAGTGTAGTATTATATCAATATCTTATG 10 3 10 90 1 1 0 0.166666667 0.5 5 0 0 10 chr1:115314665-115314720 minimal NA NA NA UAUU minimal chr6 - 79696829 79696849 intron PHIP Ensembl G14052.1 CTTCAAACTAATTTATTTAT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:79696829-79696849 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 79942670 79942693 intron HMGN3 Ensembl G14058.1 ATTTATTATTTAAACTTAATTTT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr6:79942670-79942693 minimal NA NA AUUUA UAUU minimal chr6 - 80196395 80196426 3'utr LCA5 Ensembl G14059.1 TATTCCTTTTCTACTTTTATTCCTATTTATG 2 2 2 33 0.666666667 0 0 0 0 3 0 1 2 chr6:80196395-80196426 minimal NA NA AUUUA UAUU minimal chr6 - 82456606 82456631 3'utr FAM46A Ensembl G14062.1 ACTTATATAATTTATTTCTATTTTG 4 2 3 52 0.6 0.176091259 0 0.25 0.4 3 1 1 3 chr6:82456606-82456631 minimal NA NA AUUUA UAUU minimal chr6 - 85403457 85403483 intron TBX18 Ensembl G14071.1 ATATTCAATTCAATAAATATTTATTG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:85403457-85403483 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 85442613 85442643 repeat SINE-MIR3 RepeatMasker G14072.1 TCCTATTATATAAATATTTAGCTTAATATT 4 3 4 46 1 0.602059991 0 0 0 4 0 0 4 chr6:85442613-85442643 minimal NA NA AUUUA UAUU minimal chr6 - 85445827 85445849 3'utr TBX18 Ensembl G14074.1 CTTATTATTTACCACACATACT 4 2 4 30 1 0.602059991 0 1 1 0 0 0 4 chr6:85445827-85445849 minimal NA NA AUUUA UAUU minimal chr6 - 86318291 86318316 3'utr SYNCRIP Ensembl G14081.1 AATTTATATTTATTTCATTCCTTTC 4 3 3 56 0.5 0 0 0.2 0.333333333 4 1 2 3 chr6:86318291-86318316 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 86318334 86318378 3'utr SYNCRIP Ensembl G14082.1 TATTTTTATTTAAAAAAATTAGTTCTGTTAGCTTATTTAAATTG 23 3 23 265 1 1.361727836 0 0.666666667 0.869565217 3 0 0 23 chr6:86318334-86318378 minimal NA NA AUUUA UAUU minimal chr6 - 86320811 86320837 3'utr SYNCRIP Ensembl G14084.1 TTATCTAAATAAATCATTTTAGTATG 14 2 13 135 0.928571429 1.113943352 0 0.5 0.785714286 3 1 0 13 chr6:86320811-86320837 minimal NA NA NA NA NA chr6 - 86320878 86320902 3'utr SYNCRIP Ensembl G14085.1 TACTTACATAATTTTAGAATAGTG 8 2 7 69 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr6:86320878-86320902 NA NA NA NA NA NA chr6 - 86321646 86321670 3'utr SYNCRIP Ensembl G14086.1 TACTAAATACTGCAGTGTCCCTTT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:86321646-86321670 NA NA NA NA NA NA chr6 - 86322151 86322177 3'utr SYNCRIP Ensembl G14088.1 CCACTGATGGTATCCTTAAATTTTAT 4 3 4 35 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr6:86322151-86322177 minimal NA NA NA NA NA chr6 - 86332814 86332836 intron SYNCRIP Ensembl G14089.1 TACTTATAACTTCTATTTTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:86332814-86332836 minimal NA NA NA UAUU minimal chr6 - 88294180 88294208 intron RARS2 Ensembl G14100.1 ATTATAATAACTACTATTTATGGGATAC 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:88294180-88294208 minimal NA NA AUUUA UAUU minimal chr6 - 88384640 88384662 NoAnnotation G14101.1 AATAAAACATTTACTTCTATTT 5 2 4 44 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr6:88384640-88384662 minimal NA NA AUUUA UAUU minimal chr6 - 88408494 88408519 intron AKIRIN2 Ensembl G14102.1 ACTATTCTTATTTAAATATTTTTCA 4 3 3 46 0.75 0.477121255 0 0 0 4 1 0 3 chr6:88408494-88408519 minimal NA NA AUUUA UAUU minimal chr6 - 88408650 88408670 intron AKIRIN2 Ensembl G14103.1 ATACACTTTATTTTATCATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:88408650-88408670 minimal NA NA NA UAUU minimal chr6 - 88410102 88410131 intron AKIRIN2 Ensembl G14105.1 CCTTTAGTAATAATATCACCCTTTAGACA 33 4 33 202 1 1.51851394 0 0.555555556 0.878787879 4 0 0 33 chr6:88410102-88410131 NA NA NA NA NA NA chr6 - 89320389 89320412 3'utr RNGTT Ensembl G14107.1 ACTTAATTTTCTTAATTTATTCT 5 3 3 63 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr6:89320389-89320412 minimal NA NA AUUUA UAUU minimal chr6 - 90486603 90486623 intron MDN1 Ensembl G14118.1 TCAATTATTTATATTTATTG 5 4 4 56 0.8 0.602059991 0 0 0 5 1 0 4 chr6:90486603-90486623 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 90655846 90655867 intron BACH2 Ensembl G14119.1 AATCTTAATCCCTAATATTAG 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:90655846-90655867 NA NA NA NA UAUU minimal chr6 - 93951851 93951875 3'utr EPHA7 Ensembl G14123.1 CTTTATTTATTAAACCATATTATT 9 3 6 98 0.6 0.477121255 0 0.111111111 0.2 8 3 1 6 chr6:93951851-93951875 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 94052262 94052294 intron EPHA7 Ensembl G14126.1 CCATTCTATTTATCTAATTTATAACTCTATTT 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:94052262-94052294 minimal NA NA AUUUA UAUU minimal chr6 - 94064822 94064846 intron EPHA7 Ensembl G14127.1 ACATATTTATCCTATTTATTTTAA 5 3 4 57 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr6:94064822-94064846 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 96961920 96961942 NoAnnotation G14132.1 TTCTTTTCTTCATCTCCTATTT 3 2 2 40 0.5 0 0 0 0 4 1 1 2 chr6:96961920-96961942 NA NA NA NA UAUU minimal chr6 - 97669325 97669348 intron MMS22L Ensembl G14147.1 TATTTCTATTACATATTTTATAA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr6:97669325-97669348 minimal NA NA NA UAUU minimal chr6 - 97714990 97715017 intron MMS22L Ensembl G14148.1 AATAACTTTTAAATATTTATTTATTTT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr6:97714990-97715017 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 99844463 99844484 NoAnnotation G14154.1 CACACATGGGTTATATTTATA 3 2 2 22 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:99844463-99844484 minimal NA NA AUUUA UAUU minimal chr6 - 99847319 99847348 3'utr PNISR Ensembl G14155.1 ATTCAATATATTTATTTATATTTTTAAAG 15 3 14 202 0.933333333 1.146128036 0 0.333333333 0.6 6 1 0 14 chr6:99847319-99847348 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 99848254 99848293 3'utr PNISR Ensembl G14157.1 TCTTAAATGTTAGAAATCCTATATAATATTATTTATTTA 15 7 15 167 0.9375 0.875061263 0 0.25 0.4375 9 0 1 15 chr6:99848254-99848293 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 99867239 99867261 intron PNISR Ensembl G14160.1 TTCACTCTAACTTATTTAACTT 5 3 4 46 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr6:99867239-99867261 minimal NA NA AUUUA UAUU minimal chr6 - 99930594 99930621 coding USP45 Ensembl G14163.1 CATCTACATTTAATATAAATAATTATG 4 3 4 32 1 0.602059991 0 0 0 4 0 0 4 chr6:99930594-99930621 minimal NA NA AUUUA NA minimal chr6 - 100009884 100009910 intron CCNC Ensembl G14165.1 TCTAATATTTTCTTTTTATATTTATT 3 3 3 50 1 0.477121255 0 0 0 3 0 0 3 chr6:100009884-100009910 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 144900395 144900415 intron PDE4DIP Ensembl G1417.1 TCCCTAAACTCTTTTCTATT 5 2 5 45 1 0.698970004 0 1 1 0 0 0 5 chr1:144900395-144900415 NA NA NA NA UAUU minimal chr6 - 101158737 101158766 intron ASCC3 Ensembl G14172.1 CCTTCATCATACTATTTATAATTATTATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr6:101158737-101158766 minimal NA NA AUUUA UAUU minimal chr6 - 101305241 101305265 repeat LINE-L1ME3 RepeatMasker G14176.1 TAAAATTAATACCTTCTATTTATT 5 2 3 57 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr6:101305241-101305265 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 105725671 105725697 3'utr PREP Ensembl G14186.1 CATACTTATCTATATCCATAACCTCT 11 5 9 83 0.818181818 0.954242509 0 0.1 0.181818182 9 2 0 9 chr6:105725671-105725697 minimal NA NA NA NA NA chr6 - 106649684 106649707 intron ATG5 Ensembl G14190.1 CACCTAATATTTAATATATTATT 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr6:106649684-106649707 minimal NA NA AUUUA UAUU minimal chr6 - 107387758 107387785 3'utr BEND3 Ensembl G14192.1 CACAATCATTTATTAATAATTTTTTTG 6 5 6 59 1 0.77815125 0 0 0 6 0 0 6 chr6:107387758-107387785 minimal NA NA AUUUA UAUU minimal chr1 - 144928166 144928193 intron PDE4DIP Ensembl G1420.1 TTAATCCTCCACTTACCATATTTTATG 4 2 4 36 1 0.602059991 0 1 1 0 0 0 4 chr1:144928166-144928193 minimal NA NA NA UAUU minimal chr6 - 111620424 111620457 3'utr REV3L Ensembl G14208.1 CTTCTAAATATACTTAAAATATTTTCTTTCCTT 21 7 13 226 0.565217391 0.636822098 0 0.1 0.217391304 18 8 2 13 chr6:111620424-111620457 NA NA NA NA UAUU minimal chr6 - 111696601 111696626 coding REV3L Ensembl G14211.1 TATATTATTATTAATAGATTTAGAG 4 2 4 42 1 0.602059991 0 0 0 4 0 0 4 chr6:111696601-111696626 minimal NA NA AUUUA UAUU minimal chr6 - 112392257 112392283 3'utr TUBE1 Ensembl G14216.1 ATATATTTTTATAATTATTTATAATT 5 3 5 67 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr6:112392257-112392283 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 114249121 114249142 NoAnnotation G14221.1 TTTATTAATTCAATTAAATAC 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr6:114249121-114249142 minimal NA NA NA UAUU minimal chr6 - 114262119 114262140 3'utr HDAC2 Ensembl G14222.1 CTTCATTTTATACTACTTTGG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:114262119-114262140 minimal NA NA NA NA NA chr6 - 114283576 114283603 intron HDAC2 Ensembl G14223.1 CCTTTATTTAAAATATTTATATTTCAT 6 4 5 72 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr6:114283576-114283603 minimal NA NA AUUUA UAUU minimal chr6 - 116572515 116572543 3'utr TSPYL4 Ensembl G14226.1 ACATATTTATCTTTTTACCCCATCCATT 10 4 9 100 0.818181818 0.653212514 0 0.222222222 0.363636364 7 1 1 9 chr6:116572515-116572543 minimal NA NA AUUUA UAUU minimal chr6 - 116956863 116956889 3'utr ZUFSP Ensembl G14230.1 TCTTAACATATAATTTAATTTCTAAA 11 6 10 111 0.909090909 1 0 0.1 0.181818182 9 1 0 10 chr6:116956863-116956889 minimal NA NA AUUUA NA minimal chr6 - 116956909 116956929 3'utr ZUFSP Ensembl G14231.1 AACTCCTTAATACAATTATG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:116956909-116956929 minimal NA NA NA NA NA chr6 - 116957916 116957939 intron ZUFSP Ensembl G14232.1 TATCCCAAAATATACATATTTAT 5 2 5 34 1 0.698970004 0 1 1 0 0 0 5 chr6:116957916-116957939 minimal NA NA AUUUA UAUU minimal chr6 - 117883867 117883895 3'utr GOPC Ensembl G14233.1 CATCCTAAAATCTAAACCAATTATTAAT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr6:117883867-117883895 minimal NA NA NA UAUU minimal chr6 - 118785772 118785802 3'utr C6orf204 Ensembl G14234.1 TTCCTTACTATTTACAATTTTTTATTTATA 6 4 6 97 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr6:118785772-118785802 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 119326536 119326560 intron FAM184A Ensembl G14238.1 CATACATAATTCTATTTATATTTT 11 2 11 93 1 1.041392685 0 0.333333333 0.818181818 2 0 0 11 chr6:119326536-119326560 minimal NA NA AUUUA UAUU minimal chr6 - 122764564 122764587 3'utr SERINC1 Ensembl G14245.1 CTTAATTCCCCAACCTTATTCTG 7 3 7 55 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr6:122764564-122764587 minimal NA NA NA UAUU minimal chr6 - 122764626 122764650 3'utr SERINC1 Ensembl G14246.1 TTTAAAATCTACAATTTCTTCTTT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:122764626-122764650 NA NA NA NA NA NA chr6 - 122765864 122765888 3'utr SERINC1 Ensembl G14247.1 ACTATTTTAAAATTATATTAGACC 5 2 3 47 0.6 0.477121255 0 0 0 5 2 0 3 chr6:122765864-122765888 minimal NA NA NA UAUU minimal chr6 - 127794475 127794499 coding C6orf174 Ensembl G14254.1 TATTATTTTCATCACTTTCTTACA 5 3 4 58 0.8 0.602059991 0 0 0 5 1 0 4 chr6:127794475-127794499 minimal NA NA NA UAUU minimal chr6 - 131908635 131908664 3'utr MED23 Ensembl G14263.1 ACACCTTATAACTCCCATCTCCCTATCTA 13 3 9 78 0.692307692 0.954242509 0 0.375 0.615384615 5 4 0 9 chr6:131908635-131908664 minimal NA NA NA NA NA chr6 - 132269802 132269830 3'utr CTGF Ensembl G14264.1 ATTTTTTAAAATTTATATTGTAAATATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr6:132269802-132269830 minimal NA NA AUUUA UAUU minimal chr6 - 132794403 132794430 repeat DNA-MER2 RepeatMasker G14266.1 ACTATAATTTACTTCTTTTATTTATTG 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr6:132794403-132794430 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 135344630 135344657 intron HBS1L Ensembl G14270.1 CAAATATCTATTTAATATTATTTATAT 8 3 6 89 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr6:135344630-135344657 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 135353549 135353572 intron HBS1L Ensembl G14272.1 TTTTCCTTTACCTATATATTTAT 4 3 3 50 0.75 0.477121255 0 0 0 4 1 0 3 chr6:135353549-135353572 minimal NA NA AUUUA UAUU minimal chr6 - 135605745 135605779 3'utr AHI1 Ensembl G14273.1 TTAATATTTATTTTAATCTTAATATTTTTACATT 5 5 5 68 1 0.698970004 0 0 0 5 0 0 5 chr6:135605745-135605779 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 136579061 136579082 3'utr BCLAF1 Ensembl G14277.1 TTATATACAAATTTCTTATAT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:136579061-136579082 minimal NA NA NA NA NA chr6 - 136581512 136581533 3'utr BCLAF1 Ensembl G14280.1 TTCTCTTTCTATTCCTATTTG 5 2 5 60 1 0.698970004 0 0.5 0.8 1 0 0 5 chr6:136581512-136581533 NA NA NA NA UAUU minimal chr6 - 136581815 136581837 3'utr BCLAF1 Ensembl G14281.1 ACTACACTAATTATTTTAACTG 6 3 6 48 1 0.77815125 0 0.666666667 0.833333333 1 0 0 6 chr6:136581815-136581837 minimal NA NA NA UAUU minimal chr6 - 136581999 136582025 3'utr BCLAF1 Ensembl G14282.1 TAACTATCAACTTTTAAAACTTTTAA 3 3 3 25 1 0.477121255 0 0 0 3 0 0 3 chr6:136581999-136582025 NA NA NA NA NA NA chr6 - 136594096 136594118 intron BCLAF1 Ensembl G14283.1 TATTATTCCTCATTTATACTTT 5 2 3 56 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr6:136594096-136594118 minimal NA NA AUUUA UAUU minimal chr6 - 136600270 136600299 intron BCLAF1 Ensembl G14285.1 TAATCTTTTCCCCCATTTAACTATATATT 4 3 4 39 1 0.602059991 0 0 0 4 0 0 4 chr6:136600270-136600299 minimal NA NA AUUUA UAUU minimal chr6 - 136608456 136608482 intron BCLAF1 Ensembl G14286.1 TTTCAAACACTTTAATTTTATTTATT 3 2 3 41 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:136608456-136608482 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 138743296 138743322 3'utr NHSL1 Ensembl G14289.1 AAACCTTTAATAATACATAATTTATG 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr6:138743296-138743322 minimal NA NA AUUUA NA minimal chr6 - 139693420 139693443 3'utr CITED2 Ensembl G14293.1 TTAATTTATTCTATTTTAATTTG 20 9 17 263 0.772727273 0.753327667 0 0.333333333 0.545454545 10 3 2 17 chr6:139693420-139693443 minimal NA NA AUUUA UAUU minimal chr6 - 143073746 143073773 3'utr HIVEP2 Ensembl G14297.1 TAATACTAATATTTATTTACTTTGTTT 16 7 16 165 1 1.204119983 0 0.363636364 0.5625 7 0 0 16 chr6:143073746-143073773 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 143073812 143073834 3'utr HIVEP2 Ensembl G14298.1 CACTAAAACATATTTTTATATG 5 2 2 42 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr6:143073812-143073834 minimal NA NA NA UAUU minimal chr1 - 149816906 149816943 repeat LINE-L2a RepeatMasker G1430.1 AATAATATACATTTAGTCACTTATTTTTACTTATCTG 8 3 8 74 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr1:149816906-149816943 minimal NA NA AUUUA UAUU minimal chr6 - 143757993 143758022 intron ADAT2 Ensembl G14302.1 TCATACTTTTAATTTTTATTTATTTATTT 2 2 2 35 1 0.301029996 0 0 0 2 0 0 2 chr6:143757993-143758022 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 144692089 144692116 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G14306.1 CAGGTGTCTTAAGGTGAGCTCAGGGAG 6 2 6 30 1 0.77815125 0 0.25 0.5 3 0 0 6 chr6:144692089-144692116 NA NA NA NA NA NA chr6 - 146207093 146207115 3'utr SHPRH Ensembl G14313.1 CTTTCCCTACTCTTAATTTTTC 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr6:146207093-146207115 NA NA NA NA NA NA chr6 - 146224297 146224320 intron SHPRH Ensembl G14314.1 ATTATATTTAAATATATTTATCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr6:146224297-146224320 minimal NA NA AUUUA UAUU minimal chr6 - 149826323 149826347 3'utr PPIL4 Ensembl G14319.1 TCTTACATTTTCACTCTTTTTTTA 3 2 2 41 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:149826323-149826347 NA NA NA NA NA NA chr6 - 149826379 149826405 3'utr PPIL4 Ensembl G14320.1 TATACTTTTTTACACTAATTTTATTG 9 4 9 113 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr6:149826379-149826405 minimal NA NA NA UAUU minimal chr6 - 149834971 149834997 intron PPIL4 Ensembl G14321.1 AACTCTTTTATATTTTCTCTTATTCT 7 3 4 88 0.571428571 0.602059991 0 0.5 0.714285714 2 3 0 4 chr6:149834971-149834997 minimal NA NA NA UAUU minimal chr6 - 149837885 149837913 intron PPIL4 Ensembl G14322.1 TAATTTCAACAACAAATATTTATTGGGC 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:149837885-149837913 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr6 - 149980009 149980035 3'utr LATS1 Ensembl G14326.1 TCTTTATTATACTTACCCTTTTTATG 12 8 10 152 0.769230769 0.698970004 0 0.181818182 0.307692308 9 2 1 10 chr6:149980009-149980035 minimal NA NA NA UAUU minimal chr1 - 149895387 149895410 3'utr SF3B4 Ensembl G1433.1 TACATTTTCCCAATATCTTTTCT 4 3 4 41 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr1:149895387-149895410 NA NA NA NA NA NA chr6 - 149982212 149982235 3'utr LATS1 Ensembl G14331.1 AATATTTAATCTATTTAATCTTC 12 6 12 121 1 1.079181246 0 0.25 0.5 6 0 0 12 chr6:149982212-149982235 minimal NA NA AUUUA UAUU minimal chr6 - 149982693 149982719 3'utr LATS1 Ensembl G14332.1 AAATCCTTTTAAAATGTTAATTTATT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr6:149982693-149982719 minimal NA NA AUUUA UAUU minimal chr6 - 149982721 149982748 3'utr LATS1 Ensembl G14333.1 TACAATATTTTATTTTCCTAAATTATG 4 3 3 52 0.75 0.477121255 0 0 0 4 1 0 3 chr6:149982721-149982748 minimal NA NA NA UAUU minimal chr6 - 150002733 150002758 intron LATS1 Ensembl G14336.1 ACTTATCCATATTTTAATTCTTAGG 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:150002733-150002758 minimal NA NA NA UAUU minimal chr6 - 150047617 150047645 3'utr NUP43 Ensembl G14339.1 ATCCTTCCACACTTTATTTCCTTAATAA 7 2 6 61 0.857142857 0.77815125 0 0.2 0.428571429 4 1 0 6 chr6:150047617-150047645 minimal NA NA NA UAUU minimal chr6 - 153292080 153292105 3'utr FBXO5 Ensembl G14346.1 TTTAAAATTCTCAATACAAATCAAA 5 3 4 32 0.8 0.602059991 0 0 0 5 1 0 4 chr6:153292080-153292105 NA NA NA NA NA NA chr6 - 153292124 153292145 3'utr FBXO5 Ensembl G14347.1 ACAACCTCTTAAAATATTTTT 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr6:153292124-153292145 NA NA NA NA UAUU minimal chr6 - 153292278 153292298 coding FBXO5 Ensembl G14348.1 ATCTCTTATTAAATCAATTG 10 3 10 80 1 1 0 0.666666667 0.9 1 0 0 10 chr6:153292278-153292298 minimal NA NA NA UAUU minimal chr6 - 159187285 159187305 3'utr EZR Ensembl G14357.1 ACTTATACACCTTATTAATG 17 5 15 121 0.882352941 1.176091259 0 0.5 0.764705882 4 2 0 15 chr6:159187285-159187305 minimal NA NA NA UAUU minimal chr6 - 160101654 160101677 3'utr SOD2 Ensembl G14359.1 CTTTTTTCTTAAACCTATTTAGT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr6:160101654-160101677 minimal NA NA AUUUA UAUU minimal chr1 - 150192633 150192661 3'utr ANP32E Ensembl G1436.1 CATTTCATTCCTTATTTATAAATTAACT 9 4 7 98 0.777777778 0.84509804 0 0.6 0.777777778 2 2 0 7 chr1:150192633-150192661 UUAUUUAU NA NA AUUUA UAUU minimal chr6 - 161411733 161411761 NoAnnotation G14363.1 ACCTTCATCTTATTTACTCAATAATATT 3 2 3 33 1 0.477121255 0 0 0 3 0 0 3 chr6:161411733-161411761 minimal NA NA AUUUA UAUU minimal chr6 - 163210058 163210082 tRNA tRNA-tRNA-Glu-GAG_ RepeatMasker G14364.1 TCCCTGGTCTAGTGGTTAGGATTT 8 3 4 62 0.444444444 0.301029996 0 0.285714286 0.444444444 5 4 1 4 chr6:163210058-163210082 NA NA NA NA NA NA chr1 - 150203929 150203953 intron ANP32E Ensembl G1438.1 CTTTTATAAATTTATTTATTTATT 4 2 3 57 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:150203929-150203953 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr6 - 170066190 170066225 intron WDR27 Ensembl G14380.1 ATATGTAGTATTTTTCAATATTCATTTATCTAATG 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr6:170066190-170066225 minimal NA NA AUUUA UAUU minimal chr6 - 170108801 170108821 intron PHF10 Ensembl G14386.1 TTTTAATACAGGCTGGAAAT 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr6:170108801-170108821 NA NA NA NA NA NA chr6 - 170109173 170109197 intron PHF10 Ensembl G14387.1 AATTAACTTAAAAATTCTTTTTTT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr6:170109173-170109197 NA NA NA NA NA NA chr7 + 913981 914007 3'utr SUN1 Ensembl G14390.1 TTATAATTACTATTTAATATTTAGAC 7 3 7 82 1 0.84509804 0.571428571 0.166666667 0.285714286 5 0 0 7 chr7:913981-914007 minimal NA NA AUUUA UAUU minimal chr7 + 4810970 4810990 3'utr FOXK1 Ensembl G14396.1 TTCTTTTATCTATTAAATTG 3 3 3 33 1 0.477121255 1 0 0 3 0 0 3 chr7:4810970-4810990 minimal NA NA NA UAUU minimal chr1 - 150547638 150547659 3'utr MCL1 Ensembl G1440.1 CTTATTTATATCATGTATCTC 4 3 4 37 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr1:150547638-150547659 UUAUUUAU NA NA AUUUA UAUU minimal chr7 + 5105465 5105490 repeat Low_complexity-AT_rich RepeatMasker G14401.1 TTTTATAAATATTTAATATTTATTT 11 7 11 153 0.916666667 0.740362689 0 0.2 0.333333333 8 0 1 11 chr7:5105465-5105490 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 5108819 5108841 3'utr RBAK Ensembl G14402.1 CTCATCACTCTAATCATATTTT 4 4 4 35 1 0.602059991 0 0 0 4 0 0 4 chr7:5108819-5108841 NA NA NA NA UAUU minimal chr1 - 150547676 150547700 3'utr MCL1 Ensembl G1441.1 CTATTTTTACCTATGTATTTATCG 20 7 18 238 0.9 1.255272505 0 0.266666667 0.45 11 2 0 18 chr1:150547676-150547700 minimal NA NA AUUUA UAUU minimal chr7 + 7753130 7753153 intron AC006465.3 Ensembl G14410.1 CTTTACTATTTATTTTCTTAGTG 3 2 3 39 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr7:7753130-7753153 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 12275330 12275352 repeat Low_complexity-AT_rich RepeatMasker G14416.1 TTCTTTATATAATAATTATATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr7:12275330-12275352 minimal NA NA NA UAUU minimal chr7 + 13259447 13259469 lincRNA AC011288.2 Ensembl G14419.1 TTAAATTATTCCTTTATTTTTA 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr7:13259447-13259469 minimal NA NA NA UAUU minimal chr7 + 17383519 17383545 repeat Low_complexity-AT_rich RepeatMasker G14424.1 TCTTTCCAAATTATTTCTTAATTATT 4 2 2 56 0.4 0 0 0 0 5 2 1 2 chr7:17383519-17383545 minimal NA NA NA UAUU minimal chr7 + 17385152 17385176 3'utr AHR Ensembl G14425.1 ATTAATACTCTATTTTTACATTTA 5 3 5 57 1 0.698970004 0 0 0 5 0 0 5 chr7:17385152-17385176 minimal NA NA AUUUA UAUU minimal chr1 - 150548272 150548301 3'utr MCL1 Ensembl G1444.1 ATATTTATATCAATTCCTACAGCTTTCCC 7 3 7 51 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr1:150548272-150548301 minimal NA NA AUUUA UAUU minimal chr7 + 23240496 23240520 3'utr NUPL2 Ensembl G14442.1 ATTTTTTTCTTAACTCTAAATATT 23 11 21 296 0.807692308 0.720159303 0 0.333333333 0.538461538 12 2 3 21 chr7:23240496-23240520 NA NA NA NA UAUU minimal chr7 + 24727413 24727440 3'utr MPP6 Ensembl G14449.1 TACTAATATATAATTTATCTTAATTTT 5 4 5 55 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:24727413-24727440 minimal NA NA AUUUA NA minimal chr7 + 27226614 27226634 NoAnnotation G14453.1 ACTCAATAACAAATCTAATC 3 2 3 12 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr7:27226614-27226634 NA NA NA NA NA NA chr7 + 28574335 28574359 intron CREB5 Ensembl G14457.1 CATCATCATCTTAACAAATATTTA 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr7:28574335-28574359 minimal NA NA AUUUA UAUU minimal chr7 + 28860942 28860966 3'utr CREB5 Ensembl G14460.1 TTTTATCTAATAACTTACTTTTTA 5 4 5 53 1 0.698970004 0 0 0 5 0 0 5 chr7:28860942-28860966 minimal NA NA NA NA NA chr7 + 28861129 28861155 3'utr CREB5 Ensembl G14461.1 AATAATTTTCTATTATATTTTAGACA 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr7:28861129-28861155 minimal NA NA NA UAUU minimal chr7 + 28863839 28863862 3'utr CREB5 Ensembl G14463.1 TTTATACTCTTTATCCCTTTATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr7:28863839-28863862 minimal NA NA NA UAUU minimal chr7 + 29206791 29206816 intron CHN2 Ensembl G14466.1 TTAAACTAACTTTTAATTATTTATT 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:29206791-29206816 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 30832702 30832723 intron FAM188B Ensembl G14474.1 TACTACTAATTTCATACATTT 4 4 4 34 1 0.602059991 0.25 0 0 4 0 0 4 chr7:30832702-30832723 NA NA NA NA NA NA chr7 + 32794843 32794866 intron AVL9 Ensembl G14478.1 ATCACTCTATAAATATATTATTT 7 4 7 66 1 0.84509804 0.285714286 0.166666667 0.285714286 5 0 0 7 chr7:32794843-32794866 minimal NA NA NA UAUU minimal chr1 - 150619555 150619600 3'utr GOLPH3L Ensembl G1449.1 ATCTTTTTATTTCCTATTTTTGGCTTCCTACATAAATTAATAAAG 7 4 7 84 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr1:150619555-150619600 minimal NA NA NA UAUU minimal chr7 + 44813956 44814001 NoAnnotation G14492.1 TATTTCCATATCTTTCTCTATGCCTTATTTACATTTTTTTCTTTT 6 5 5 84 0.833333333 0.698970004 0 0 0 6 1 0 5 chr7:44813956-44814001 minimal NA NA AUUUA UAUU minimal chr7 + 45757090 45757111 3'utr ADCY1 Ensembl G14494.1 ATTCTCTCTAAATTATTTATT 5 4 5 55 1 0.698970004 0.8 0.25 0.4 3 0 0 5 chr7:45757090-45757111 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 56009922 56009945 NoAnnotation G14498.1 CTTAATCATTTATTTTATTTATT 10 4 10 137 1 1 0.1 0.333333333 0.6 4 0 0 10 chr7:56009922-56009945 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 150620415 150620437 3'utr GOLPH3L Ensembl G1450.1 AACTATCTATTATATTTTTCTG 7 3 6 76 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr1:150620415-150620437 minimal NA NA NA UAUU minimal chr7 + 64171571 64171594 NoAnnotation G14502.1 CTAACATCTCTAATAATTATTTT 7 3 7 60 1 0.84509804 0 0 0 7 0 0 7 chr7:64171571-64171594 minimal NA NA NA UAUU minimal chr7 + 64391086 64391112 repeat Low_complexity-AT_rich RepeatMasker G14505.1 TTTTACATTTATATTTTTTCTTATTT 7 5 7 115 1 0.84509804 0 0 0 7 0 0 7 chr7:64391086-64391112 minimal NA NA AUUUA UAUU minimal chr1 - 150937868 150937900 3'utr CERS2 Ensembl G1451.1 CAACTAATTCTAATTTTTATTTATTAAATATT 104 10 88 1284 0.8 1.099384632 0 0.5 0.772727273 25 16 6 88 chr1:150937868-150937900 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 66151620 66151644 intron KCTD7 Ensembl G14512.1 CTATCCTATTTAATACTATTTAAC 6 5 5 61 0.833333333 0.698970004 0 0 0 6 1 0 5 chr7:66151620-66151644 minimal NA NA AUUUA UAUU minimal chr7 + 66420660 66420681 3'utr C7orf42 Ensembl G14515.1 TACATATTTATAAAAATCTAT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr7:66420660-66420681 minimal NA NA AUUUA UAUU minimal chr7 + 68527463 68527502 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G14519.1 AAATGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTA 280 2 247 795 0.820598007 1.050274272 0.252491694 0.476190476 0.926910299 22 33 21 247 chr7:68527463-68527502 NA NA NA NA NA NA chr7 + 68669218 68669240 repeat LINE-L1MA7 RepeatMasker G14523.1 TTACTGTAGCTTTGTATTGGAT 35 2 32 310 0.864864865 1.028028724 0.135135135 0.7 0.918918919 3 3 2 32 chr7:68669218-68669240 NA NA NA NA UAUU minimal chr7 + 69431602 69431623 intron AUTS2 Ensembl G14526.1 CCATAATATTATTTAATATTT 2 2 2 20 1 0.301029996 0.5 0 0 2 0 0 2 chr7:69431602-69431623 minimal NA NA AUUUA UAUU minimal chr1 - 151300000 151300024 5'utr PI4KB Ensembl G1453.1 CTGGGGAATTTTATTTTATTTTAT 4 2 4 51 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:151300000-151300024 minimal NA NA NA UAUU minimal chr7 + 77408845 77408866 3'utr RSBN1L Ensembl G14540.1 CTTATTTATATCCTTTTTTTT 10 4 8 141 0.727272727 0.602059991 0 0.25 0.454545455 6 2 1 8 chr7:77408845-77408866 UUAUUUAU NA NA AUUUA UAUU minimal chr7 + 77411472 77411494 NoAnnotation G14541.1 CAAAAATTTTCTATTTTAATAT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:77411472-77411494 NA NA NA NA UAUU minimal chr7 + 80963124 80963147 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G14555.1 TCTCGGCGCCCCCTCGATGCTCT 282 4 8 1202 0.024193548 -1.004798883 0.002688172 0.469387755 0.930107527 26 273 90 9 chr7:80963124-80963147 NA NA NA NA NA NA chr7 + 82600198 82600218 NoAnnotation G14557.1 ATGGGTCATCATCATTATCA 4 2 4 24 1 0.602059991 0 0.5 0.75 1 0 0 4 chr7:82600198-82600218 minimal NA NA NA NA NA chr1 - 151376732 151376752 3'utr POGZ Ensembl G1456.1 ATAAAAAACTTTTTTCATTG 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:151376732-151376752 NA NA NA NA NA NA chr7 + 86825480 86825501 repeat Low_complexity-AT_rich RepeatMasker G14563.1 TATAAATTATTTTATTTATTA 5 3 4 61 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr7:86825480-86825501 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 90012394 90012414 intron GTPBP10 Ensembl G14570.1 TAAACCTATTTATTCATTTA 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:90012394-90012414 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 90014924 90014950 repeat Low_complexity-AT_rich RepeatMasker G14571.1 TCATTTTTTAAAATTATATTTAATTT 4 4 4 56 0.8 0.301029996 0 0 0 5 0 1 4 chr7:90014924-90014950 minimal NA NA AUUUA UAUU minimal chr7 + 90015799 90015820 repeat Low_complexity-T-rich RepeatMasker G14572.1 TCATAATCTATTTAATTTCCC 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:90015799-90015820 minimal NA NA AUUUA UAUU minimal chr7 + 90018573 90018596 3'utr GTPBP10 Ensembl G14575.1 TAAATCACATATTTTAACTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:90018573-90018596 minimal NA NA NA UAUU minimal chr7 + 90042551 90042573 coding CLDN12 Ensembl G14576.1 ACTTCCCTTATACTATTTATTT 9 4 9 94 0.9 0.653212514 0.2 0.285714286 0.5 5 0 1 9 chr7:90042551-90042573 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 92086818 92086851 3'utr GATAD1 Ensembl G14583.1 AAATATATTTTGAACTTAAATTATATTCTATAT 7 4 7 62 1 0.84509804 0.428571429 0.4 0.571428571 3 0 0 7 chr7:92086818-92086851 minimal NA NA NA UAUU minimal chr7 + 92086907 92086932 3'utr GATAD1 Ensembl G14584.1 TATCTATTTTTCTCCATTATTTATT 4 4 4 56 1 0.602059991 0 0 0 4 0 0 4 chr7:92086907-92086932 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 92905627 92905664 coding CCDC132 Ensembl G14589.1 ACTTAATTACTATTCATATATCTCTCCTTTAGATTTT 6 5 5 62 1 0.77815125 0 0 0 6 0 0 6 chr7:92905627-92905664 NA NA NA NA UAUU minimal chr1 - 151410762 151410784 intron POGZ Ensembl G1459.1 TCTAATTTATTTTACTTTATAT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:151410762-151410784 minimal NA NA AUUUA UAUU minimal chr7 + 92916228 92916249 intron CCDC132 Ensembl G14590.1 AAATAACTCTTTTAACTTATT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr7:92916228-92916249 minimal NA NA NA UAUU minimal chr7 + 94185931 94185956 3'utr CASD1 Ensembl G14599.1 TATTTCCTATTACCCACCTCCTATT 7 6 7 54 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr7:94185931-94185956 NA NA NA NA UAUU minimal chr7 + 94297593 94297621 3'utr PEG10 Ensembl G14602.1 TAATTCTAAATTTATTATTCTATAGTTT 10 4 9 110 0.9 0.954242509 0 0.125 0.3 7 1 0 9 chr7:94297593-94297621 minimal NA NA AUUUA UAUU minimal chr7 + 94298623 94298654 3'utr PEG10 Ensembl G14605.1 ATTTCAAATAAACTCGGAGGGAACTGCAGGG 3 2 2 13 0.666666667 0.301029996 1 0 0 3 1 0 2 chr7:94298623-94298654 NA NA NA NA NA NA chr7 + 94298886 94298911 3'utr PEG10 Ensembl G14607.1 CCCCTACCCCTCCTTCTAACTTTAT 6 3 6 44 1 0.77815125 0 0.25 0.5 3 0 0 6 chr7:94298886-94298911 minimal NA NA NA NA NA chr7 + 94298916 94298948 3'utr PEG10 Ensembl G14608.1 TATTCTCTTCACTCTATATTTCTCTCTATTTG 38 13 36 450 0.9 1.079181246 0.1 0.225806452 0.4 24 2 2 36 chr7:94298916-94298948 NA NA NA NA UAUU minimal chr7 + 94581255 94581284 intron PPP1R9A Ensembl G14611.1 TTATATTTTCTTTCTTTTTAAATTATTAT 4 3 3 71 0.75 0.477121255 0 0 0 4 1 0 3 chr7:94581255-94581284 minimal NA NA NA UAUU minimal chr7 + 94922164 94922186 3'utr PPP1R9A Ensembl G14618.1 TTTTCCTATTATTTCTTTTATT 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:94922164-94922186 minimal NA NA NA UAUU minimal chr7 + 94925175 94925198 3'utr PPP1R9A Ensembl G14619.1 TTTTCTTCAACATTATTTAATAT 4 3 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr7:94925175-94925198 minimal NA NA AUUUA UAUU minimal chr1 - 151421730 151421752 intron POGZ Ensembl G1462.1 ATTCCTTAATTATTTATTTATG 5 2 4 61 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr1:151421730-151421752 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 96806392 96806414 intron ACN9 Ensembl G14623.1 CTTTATTTTTCAACAATTTAAC 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr7:96806392-96806414 minimal NA NA AUUUA UAUU minimal chr7 + 97829325 97829349 intron LMTK2 Ensembl G14628.1 TTCTATTTTTATTTCTATTCTTCC 3 2 2 45 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:97829325-97829349 minimal NA NA NA UAUU minimal chr7 + 99103416 99103437 5'utr ZKSCAN5 Ensembl G14639.1 TTATTCCTTATTATCATTTTG 3 2 3 36 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr7:99103416-99103437 minimal NA NA NA UAUU minimal chr7 + 99229956 99229979 3'utr ZNF498 Ensembl G14647.1 ATAATTTCAAACCTATATAAATA 4 3 3 24 1 0.602059991 0 0 0 4 0 0 4 chr7:99229956-99229979 NA NA NA NA NA NA chr7 + 99264764 99264789 NoAnnotation G14649.1 CATCCTTATTTAACAAATATTTATT 3 2 2 34 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr7:99264764-99264789 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 99635733 99635786 3'utr ZKSCAN1 Ensembl G14651.1 CAAAATGTGCAACTTCTTACAAAAATTGTTAACGTTAGGTACTTCTATATATT 8 3 8 68 1 0.903089987 0.25 0.142857143 0.25 6 0 0 8 chr7:99635733-99635786 NA NA NA NA UAUU minimal chr7 + 99638653 99638675 NoAnnotation G14653.1 TATTTTTATTAACTTTTAGTTA 8 2 8 103 1 0.903089987 0 0.666666667 0.875 1 0 0 8 chr7:99638653-99638675 minimal NA NA NA UAUU minimal chr7 + 100954200 100954220 repeat LINE-L1M2 RepeatMasker G14663.1 CTTTTACTCAATTCAAATAT 4 2 3 33 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr7:100954200-100954220 NA NA NA NA NA NA chr7 + 101894497 101894525 repeat Low_complexity-AT_rich RepeatMasker G14668.1 TTTAATTAATATTACTTTTTTTTTTATT 12 4 5 187 0.416666667 0.698970004 0.083333333 0.2 0.333333333 8 7 0 5 chr7:101894497-101894525 minimal NA NA NA UAUU minimal chr7 + 101895378 101895404 repeat Low_complexity-AT_rich RepeatMasker G14669.1 TATTTTTTTTCCTCTATTATTTATTT 4 4 4 66 1 0.602059991 0 0 0 4 0 0 4 chr7:101895378-101895404 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 153780509 153780533 3'utr GATAD2B Ensembl G1467.1 ATATATTCTTACATCTTTTCTTTG 4 4 4 46 1 0.602059991 0 0 0 4 0 0 4 chr1:153780509-153780533 NA NA NA NA UAUU minimal chr7 + 103827439 103827460 NoAnnotation G14674.1 TAAATATTTTCCCTAAATTTT 5 2 2 49 0.285714286 -0.176091259 0.285714286 0.4 0.571428571 3 3 2 2 chr7:103827439-103827460 NA NA NA NA UAUU minimal chr1 - 153780543 153780578 3'utr GATAD2B Ensembl G1468.1 AACTGGGTCTGGGATTATTTTAAAATTATATATAT 6 4 5 56 0.714285714 0.397940009 0 0.166666667 0.285714286 5 1 1 5 chr1:153780543-153780578 minimal NA NA NA UAUU minimal chr7 + 104754435 104754459 3'utr MLL5 Ensembl G14681.1 ACCTTTAATTTCTTTTTTATTTTA 6 4 5 88 0.833333333 0.698970004 0 0 0 6 1 0 5 chr7:104754435-104754459 minimal NA NA NA UAUU minimal chr7 + 105177232 105177252 intron RINT1 Ensembl G14683.1 AATACTTTTAACAATATAAT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr7:105177232-105177252 NA NA NA NA NA NA chr7 + 105208630 105208653 NoAnnotation G14684.1 TAATTAAACATTTTTATTATTTA 4 2 3 49 0.75 0.477121255 0 0 0 4 1 0 3 chr7:105208630-105208653 minimal NA NA AUUUA UAUU minimal chr7 + 107387601 107387629 intron CBLL1 Ensembl G14689.1 TTATCATTATTAAATGCTGTACCTCATG 4 2 4 37 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr7:107387601-107387629 minimal NA NA NA UAUU minimal chr7 + 107387803 107387829 intron CBLL1 Ensembl G14690.1 AATATTTAATATTTGAGGGACAGCAT 4 2 4 32 1 0.602059991 0.5 1 1 0 0 0 4 chr7:107387803-107387829 minimal NA NA AUUUA UAUU minimal chr7 + 107401013 107401035 3'utr CBLL1 Ensembl G14691.1 TATAAATCAACATTCTTAGGAT 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr7:107401013-107401035 NA NA NA NA NA NA chr7 + 107453208 107453229 NoAnnotation G14694.1 CACACTTAATAATTTAATATT 5 2 5 39 1 0.698970004 0.2 0.333333333 0.6 2 0 0 5 chr7:107453208-107453229 minimal NA NA AUUUA UAUU minimal chr7 + 107559854 107559891 3'utr DLD Ensembl G14695.1 AATACTCTTATATCTATATTTTACATAAATTTAGTAT 31 7 28 327 0.903225806 1.447158031 0.032258065 0.285714286 0.516129032 15 3 0 28 chr7:107559854-107559891 minimal NA NA AUUUA UAUU minimal chr7 + 108213892 108213912 3'utr DNAJB9 Ensembl G14698.1 ATTTCACTTTAAACAATTTG 3 2 3 24 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr7:108213892-108213912 NA NA NA NA NA NA chr7 + 110280007 110280030 NoAnnotation G14700.1 TAGAGGTCTCAGGTTCGAATCTT 12 2 7 64 0.5 0.367976785 0 0.375 0.642857143 5 5 2 7 chr7:110280007-110280030 NA NA NA NA NA NA chr7 + 112115591 112115619 3'utr IFRD1 Ensembl G14705.1 ACTATTTTCTAATTTCTATTTTTTTTTC 17 8 15 301 0.882352941 1.176091259 0 0.133333333 0.235294118 13 2 0 15 chr7:112115591-112115619 NA NA NA NA UAUU minimal chr7 + 112115629 112115651 3'utr IFRD1 Ensembl G14706.1 TATTTAAACTCTAGACACAGTT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr7:112115629-112115651 minimal NA NA AUUUA UAUU minimal chr7 + 115889707 115889733 intron TES Ensembl G14721.1 TTTTTTTCATTTCCTTTATTAATACT 3 2 3 40 1 0.477121255 0 0 0 3 0 0 3 chr7:115889707-115889733 minimal NA NA NA UAUU minimal chr7 + 116335243 116335270 intron MET Ensembl G14724.1 CAGTTAACTTTTCACATAATATTTATT 3 2 3 36 0.3 -0.425968732 0 0.4 0.7 3 0 7 3 chr7:116335243-116335270 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 116558071 116558091 3'utr CAPZA2 Ensembl G14726.1 CTAATCAACCATTATTTTTC 3 2 3 24 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr7:116558071-116558091 minimal NA NA NA UAUU minimal chr1 - 153902265 153902291 3'utr DENND4B Ensembl G1473.1 TATTTTATTTTAAATTATTTATTCTG 12 7 12 182 1 1.079181246 0 0.2 0.333333333 8 0 0 12 chr1:153902265-153902291 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 117832181 117832208 3'utr NAA38 Ensembl G14733.1 TAAATTAAAATATTTCTACATTTTATT 11 3 10 130 0.909090909 1 0 0.222222222 0.363636364 7 1 0 10 chr7:117832181-117832208 minimal NA NA NA UAUU minimal chr7 + 120616183 120616203 3'utr ING3 Ensembl G14740.1 CTATTTAAATTATAAATTTG 2 2 2 18 1 0.301029996 0.5 0 0 2 0 0 2 chr7:120616183-120616203 minimal NA NA AUUUA UAUU minimal chr7 + 124755738 124755760 lincRNA RP11-3B12.1 Ensembl G14746.1 CCATAATTTATTAACTATTTAT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:124755738-124755760 minimal NA NA AUUUA UAUU minimal chr1 - 153920173 153920204 3'utr CRTC2 Ensembl G1475.1 ATACTATTTTTTATTAAATATATTATTATAT 35 9 31 441 0.885714286 1.491361694 0 0.32 0.514285714 17 4 0 31 chr1:153920173-153920204 minimal NA NA NA UAUU minimal chr7 + 128005736 128005757 NoAnnotation G14753.1 ATCATTGACACTTCGAATGCA 3 2 3 15 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:128005736-128005757 NA NA NA NA NA NA chr7 + 128388556 128388577 intron CALU Ensembl G14759.1 AGCTTTTAATTTCTTATTTAG 3 2 3 32 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr7:128388556-128388577 minimal NA NA AUUUA UAUU minimal chr1 - 153931635 153931661 3'utr SLC39A1 Ensembl G1476.1 ACATATTCTTTAGAATCTATTTTATT 10 3 9 106 0.9 0.954242509 0.1 0.285714286 0.5 5 1 0 9 chr1:153931635-153931661 minimal NA NA NA UAUU minimal chr7 + 128409584 128409607 3'utr CALU Ensembl G14764.1 ATTTTAATAATTCTCACTTAACT 9 4 9 86 1 0.954242509 0 0.5 0.666666667 3 0 0 9 chr7:128409584-128409607 NA NA NA NA NA NA chr7 + 128410861 128410882 3'utr CALU Ensembl G14766.1 TATATATAACCTTTATTATTG 23 8 23 224 1 1.361727836 1 0.363636364 0.695652174 7 0 0 23 chr7:128410861-128410882 minimal NA NA NA UAUU minimal chr1 - 154179213 154179238 3'utr C1orf43 Ensembl G1477.1 ACTTTATAAATTATTTAATAAAATG 13 5 12 109 0.923076923 1.079181246 0 0.444444444 0.615384615 5 1 0 12 chr1:154179213-154179238 minimal NA NA AUUUA UAUU minimal chr7 + 129773583 129773606 3'utr KLHDC10 Ensembl G14774.1 TATTTAACACTAACCATTCTCCT 4 2 4 31 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr7:129773583-129773606 minimal NA NA AUUUA UAUU minimal chr7 + 131095865 131095888 intron MKLN1 Ensembl G14779.1 TCAATTAATATTTTACTATTTAT 4 4 4 48 1 0.602059991 0 0 0 4 0 0 4 chr7:131095865-131095888 minimal NA NA AUUUA UAUU minimal chr7 + 131121612 131121636 intron MKLN1 Ensembl G14781.1 TCTTAATATTATTCCCTATTTATT 2 2 2 26 1 0.301029996 0.5 0 0 2 0 0 2 chr7:131121612-131121636 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 131176711 131176731 3'utr MKLN1 Ensembl G14788.1 CTCTATTATCCTTATTTATG 6 2 5 61 0.833333333 0.698970004 0.833333333 0.333333333 0.666666667 2 1 0 5 chr7:131176711-131176731 UUAUUUAU NA NA AUUUA UAUU minimal chr7 + 134653236 134653256 3'utr CALD1 Ensembl G14795.1 TATATTATCACTATATTTAA 4 2 2 37 0.5 0.301029996 0 0 0 4 2 0 2 chr7:134653236-134653256 minimal NA NA AUUUA UAUU minimal chr7 + 134653662 134653688 3'utr CALD1 Ensembl G14796.1 ATTCATATCTAAATTACATTATTATG 6 4 4 61 0.714285714 0.397940009 0.142857143 0 0 7 1 1 5 chr7:134653662-134653688 minimal NA NA NA UAUU minimal chr7 + 135255681 135255703 repeat Simple_repeat-(TATAA)n RepeatMasker G14800.1 TAACATACTAATTATAATATTT 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr7:135255681-135255703 minimal NA NA NA UAUU minimal chr7 + 135276239 135276265 coding NUP205 Ensembl G14801.1 CCTCCAACTATTTATATTCCTTATTT 10 2 8 96 0.8 0.903089987 0.2 0.5 0.7 3 2 0 8 chr7:135276239-135276265 minimal NA NA AUUUA UAUU minimal chr7 + 135285749 135285775 repeat Low_complexity-AT_rich RepeatMasker G14803.1 TCAACTATTTATAATTTATAAATTAT 6 5 6 63 1 0.77815125 0.166666667 0 0 6 0 0 6 chr7:135285749-135285775 minimal NA NA AUUUA UAUU minimal chr7 + 135359716 135359738 NoAnnotation G14805.1 TATTTATATTATTACTTTGTAG 2 2 2 24 1 0.301029996 1 0 0 2 0 0 2 chr7:135359716-135359738 minimal NA NA AUUUA UAUU minimal chr1 - 154522549 154522575 3'utr UBE2Q1 Ensembl G1481.1 ATTTTTAATTTATTTTCTCTTATTTC 5 5 5 84 1 0.698970004 0 0 0 5 0 0 5 chr1:154522549-154522575 minimal NA NA AUUUA UAUU minimal chr7 + 138985404 138985426 3'utr UBN2 Ensembl G14813.1 ATTATATCCCACTCCTTGGGAT 5 2 3 35 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr7:138985404-138985426 minimal NA NA NA NA NA chr7 + 139030492 139030533 3'utr C7orf55 Ensembl G14815.1 AATAATTTCTATCAATATGTATTTATCATTAAATTTTTTTT 12 5 7 158 0.583333333 0.84509804 0.166666667 0.333333333 0.5 6 5 0 7 chr7:139030492-139030533 minimal NA NA AUUUA UAUU minimal chr7 + 139103277 139103300 intron LUC7L2 Ensembl G14818.1 TCTTACATATTCTGTGGATTACT 4 2 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr7:139103277-139103300 NA NA NA NA UAUU minimal chr7 + 139103336 139103361 intron LUC7L2 Ensembl G14819.1 TTAAAATCTTTCCTATTTTTTTTTG 7 4 6 95 0.857142857 0.77815125 0.285714286 0.166666667 0.285714286 5 1 0 6 chr7:139103336-139103361 NA NA NA NA UAUU minimal chr7 + 139103412 139103436 intron LUC7L2 Ensembl G14820.1 CTCTCAATATTTTATTTCTTATAT 17 5 17 205 1 1.230448921 0 0.333333333 0.529411765 8 0 0 17 chr7:139103412-139103436 minimal NA NA NA UAUU minimal chr7 + 139103467 139103487 intron LUC7L2 Ensembl G14821.1 ATTTTAATAATAATTAATTG 10 6 10 90 1 1 1 0.333333333 0.6 4 0 0 10 chr7:139103467-139103487 NA NA NA NA NA NA chr7 + 139105922 139105945 intron LUC7L2 Ensembl G14822.1 TTTAACCCTCCTTAACTATATTT 4 3 3 37 0.75 0.477121255 0 0 0 4 1 0 3 chr7:139105922-139105945 NA NA NA NA UAUU minimal chr7 + 139106338 139106362 intron LUC7L2 Ensembl G14825.1 TTATTTAAATTCATATTAATAATT 5 3 4 56 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr7:139106338-139106362 minimal NA NA AUUUA UAUU minimal chr7 + 139107770 139107794 3'utr LUC7L2 Ensembl G14830.1 ATGTTCTAGGGGGTGGGGGCAGGG 2 2 2 7 1 0.301029996 0.5 0 0 2 0 0 2 chr7:139107770-139107794 NA NA NA NA NA NA chr7 + 141179097 141179122 NoAnnotation G14834.1 AATCCCTTAATTTTCTTAAATATTT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr7:141179097-141179122 NA NA NA NA UAUU minimal chr7 + 141441323 141441343 repeat Low_complexity-AT_rich RepeatMasker G14836.1 AATCTACTTATTAAATTATT 3 3 3 27 1 0.477121255 0.333333333 0 0 3 0 0 3 chr7:141441323-141441343 minimal NA NA NA UAUU minimal chr7 + 141476820 141476840 intron SSBP1 Ensembl G14838.1 CTTACTCTATATCATTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:141476820-141476840 minimal NA NA AUUUA UAUU minimal chr7 + 148846314 148846340 intron ZNF398 Ensembl G14852.1 TCATCAATTTATTTATTTATTTATTT 2 2 2 32 1 0.301029996 0 0 0 2 0 0 2 chr7:148846314-148846340 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 148885312 148885335 NoAnnotation G14854.1 AATAATTACACCAATCATATTTA 3 2 2 22 0.5 0 0.25 0 0 4 1 1 2 chr7:148885312-148885335 minimal NA NA AUUUA UAUU minimal chr7 + 150790536 150790557 intron AGAP3 Ensembl G14859.1 TATTTAATTTAAATTTCATTT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr7:150790536-150790557 minimal NA NA AUUUA UAUU minimal chr7 + 151075039 151075067 repeat Low_complexity-AT_rich RepeatMasker G14861.1 CAATTTATTTTTAATTAATATTTTTAGA 10 7 10 133 1 1 0 0.428571429 0.6 4 0 0 10 chr7:151075039-151075067 minimal NA NA AUUUA UAUU minimal chr7 + 155100424 155100444 3'utr INSIG1 Ensembl G14863.1 ATTTTTAAAAATAGGGCTGT 3 2 3 21 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr7:155100424-155100444 NA NA NA NA NA NA chr7 + 155101038 155101067 repeat Low_complexity-AT_rich RepeatMasker G14864.1 TATCTCTTAAATATTTATTTTTTTTAACG 20 9 15 281 0.75 1.176091259 0.2 0.117647059 0.25 15 5 0 15 chr7:155101038-155101067 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 155256894 155256919 3'utr EN2 Ensembl G14865.1 TAAATTAAATATATTCAATATATTT 3 2 3 32 1 0.477121255 0 0 0 3 0 0 3 chr7:155256894-155256919 NA NA NA NA UAUU minimal chr7 + 155472702 155472723 intron RBM33 Ensembl G14866.1 ACTAATATAAATTTATTTATT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:155472702-155472723 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 + 155572194 155572217 3'utr RBM33 Ensembl G14871.1 AATTCTCCAAAGGCATTTAGCCT 4 2 4 24 1 0.602059991 0 1 1 0 0 0 4 chr7:155572194-155572217 minimal NA NA AUUUA NA minimal chr7 + 155572741 155572762 3'utr RBM33 Ensembl G14873.1 TATTTAATAATTTAATATACT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:155572741-155572762 minimal NA NA AUUUA UAUU minimal chr7 + 156441472 156441494 intron RNF32 Ensembl G14874.1 TTCTTTTACCATCTTTTAAATT 5 2 5 58 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr7:156441472-156441494 NA NA NA NA NA NA chr7 + 156764075 156764096 3'utr NOM1 Ensembl G14879.1 ATACTATTTATTTACTTTTTA 5 2 5 60 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr7:156764075-156764096 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 + 157009743 157009767 intron UBE3C Ensembl G14882.1 CACTTTAAAATTATTTATTTTATG 4 2 4 48 1 0.602059991 1 0.5 0.75 1 0 0 4 chr7:157009743-157009767 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 6502320 6502343 3'utr KDELR2 Ensembl G14895.1 CATTCCACTATATTTATTTTTTG 5 3 5 54 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:6502320-6502343 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 6729809 6729829 3'utr ZNF12 Ensembl G14896.1 CACTACATTAATATCATTTG 5 3 5 35 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr7:6729809-6729829 NA NA NA NA NA NA chr7 - 17878636 17878660 intron SNX13 Ensembl G14903.1 ATAATTCTAATCTAATAACAATTC 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr7:17878636-17878660 NA NA NA NA NA NA chr7 - 19737608 19737631 3'utr TWISTNB Ensembl G14910.1 ACTTTATAATACAATATTATATT 4 3 4 36 1 0.602059991 0 0 0 4 0 0 4 chr7:19737608-19737631 minimal NA NA NA UAUU minimal chr7 - 23351656 23351679 3'utr IGF2BP3 Ensembl G14920.1 ATATTCTAATTCTTCTTAATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr7:23351656-23351679 NA NA NA NA UAUU minimal chr7 - 26229776 26229800 3'utr HNRNPA2B1 Ensembl G14926.1 ATTACAATTCTATTTTAAATATAA 6 3 6 57 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr7:26229776-26229800 NA NA NA NA UAUU minimal chr7 - 26231764 26231789 3'utr HNRNPA2B1 Ensembl G14928.1 ATTATTTAATAACATTACCTTACTG 10 5 8 94 0.8 0.903089987 0 0.111111111 0.2 8 2 0 8 chr7:26231764-26231789 minimal NA NA AUUUA UAUU minimal chr7 - 26232076 26232098 intron HNRNPA2B1 Ensembl G14929.1 TTTTACAATTATTATTATCTTG 4 3 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr7:26232076-26232098 minimal NA NA NA UAUU minimal chr7 - 26235389 26235411 intron HNRNPA2B1 Ensembl G14930.1 TATATTTACTTCATTTATATTT 4 2 4 51 1 0.602059991 0 0.5 0.75 1 0 0 4 chr7:26235389-26235411 minimal NA NA AUUUA UAUU minimal chr7 - 27133578 27133605 3'utr HOXA1 Ensembl G14937.1 TTACACAATTAATTCATCCCTTAATTT 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:27133578-27133605 NA NA NA NA NA NA chr7 - 27146940 27146968 3'utr HOXA3 Ensembl G14939.1 TTTTAAATATTATTTATCCCCATCCGTT 17 3 14 182 0.823529412 1.146128036 0 0.222222222 0.588235294 7 3 0 14 chr7:27146940-27146968 UUAUUUAU NA NA AUUUA UAUU minimal chr7 - 27180998 27181027 3'utr HOXA5 Ensembl G14941.1 ATATTTTTATTCAAACTACCTATATTCCT 6 4 5 62 0.833333333 0.698970004 0 0 0 6 1 0 5 chr7:27180998-27181027 minimal NA NA NA UAUU minimal chr7 - 27210302 27210352 lincRNA RP1-170O19.21 Ensembl G14949.1 TTATTATAAATGTTAGTTCTAGCTCTATTTACTTCTAATCTTAAATCAGA 41 8 40 430 0.975609756 1.602059991 0 0.5 0.731707317 11 1 0 40 chr7:27210302-27210352 minimal NA NA AUUUA UAUU minimal chr7 - 27233932 27233957 NoAnnotation G14953.1 TACTATCATATTTATTTACTTATTT 5 4 5 54 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:27233932-27233957 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 27234256 27234283 NoAnnotation G14954.1 ATCTTACCTAACTCTCCTCCTATTTAA 6 3 5 54 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr7:27234256-27234283 minimal NA NA AUUUA UAUU minimal chr7 - 27236383 27236405 3'utr HOXA13 Ensembl G14955.1 ACCATTCTTTATTATTATTCAG 4 2 4 40 1 0.602059991 0 1 1 0 0 0 4 chr7:27236383-27236405 minimal NA NA NA UAUU minimal chr7 - 27689138 27689158 coding HIBADH Ensembl G14959.1 CTATCCACTTATTATTTATG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:27689138-27689158 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 155868710 155868738 3'utr RIT1 Ensembl G1496.1 CTCATCTTAATATTTTCCATTTTTATTA 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr1:155868710-155868738 minimal NA NA NA UAUU minimal chr7 - 27745001 27745031 NoAnnotation G14960.1 TGATGATGATGATGATGATGATGATGGCCA 158 4 6 1224 0.035087719 -0.367976785 0.087719298 0.448275862 0.906432749 16 152 13 6 chr7:27745001-27745031 NA NA NA NA NA NA chr7 - 32908847 32908867 3'utr KBTBD2 Ensembl G14969.1 TACATAAAATTCTATCTTTG 7 2 3 60 0.375 0.176091259 0 0.5 0.75 2 4 1 3 chr7:32908847-32908867 NA NA NA NA NA NA chr1 - 155869294 155869321 3'utr RIT1 Ensembl G1497.1 CACACACCAACACATTTATATTCATTG 3 2 3 17 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:155869294-155869321 minimal NA NA AUUUA UAUU minimal chr7 - 32953046 32953067 NoAnnotation G14970.1 TAACCATTAATCTATTTATCA 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:32953046-32953067 minimal NA NA AUUUA UAUU minimal chr1 - 155882845 155882882 3'utr KIAA0907 Ensembl G1498.1 TAAATATTTAGACCATAATTTCATTATAAATAAATCT 4 3 4 28 0.8 0.301029996 0 0 0 5 0 1 4 chr1:155882845-155882882 minimal NA NA AUUUA UAUU minimal chr7 - 40172409 40172431 3'utr C7orf11 Ensembl G14985.1 TTTCCATATATTTAACATTCCT 4 3 3 34 0.6 0.176091259 0 0 0 5 1 1 3 chr7:40172409-40172431 minimal NA NA AUUUA UAUU minimal chr7 - 42940008 42940032 NoAnnotation G14991.1 ACATTATTTAATTAGTTAATTATT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr7:42940008-42940032 minimal NA NA AUUUA UAUU minimal chr7 - 43678939 43678961 3'utr C7orf44 Ensembl G14993.1 AAACTCCTATTATAAATTTAAG 4 2 4 28 1 0.602059991 0 0.5 0.75 1 0 0 4 chr7:43678939-43678961 minimal NA NA AUUUA UAUU minimal chr1 + 6931901 6931926 repeat Low_complexity-AT_rich RepeatMasker G15.1 TAACCATTTCATTTTTTAATTTAAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr1:6931901-6931926 minimal NA NA AUUUA NA minimal chr7 - 44590589 44590611 NoAnnotation G15001.1 CATATATATTATTACTTATTCT 5 3 5 53 0.833333333 0.397940009 0 0.5 0.666666667 2 0 1 5 chr7:44590589-44590611 minimal NA NA NA UAUU minimal chr7 - 44594034 44594056 NoAnnotation G15003.1 TATATTTTATTCAATATTTATG 5 4 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:44594034-44594056 minimal NA NA AUUUA UAUU minimal chr7 - 44618556 44618579 3'utr TMED4 Ensembl G15010.1 ATAAATTATATATTTTCCTTCCT 8 5 8 82 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr7:44618556-44618579 minimal NA NA NA UAUU minimal chr7 - 44872580 44872608 intron H2AFV Ensembl G15014.1 TACAATCTTTTAAAAATTATATTTATTT 18 4 11 241 0.611111111 1.041392685 0 0.230769231 0.444444444 10 7 0 11 chr7:44872580-44872608 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 44921955 44921979 3'utr PURB Ensembl G15017.1 CTTTTCTTTTAAATTTTTCTCCGT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr7:44921955-44921979 NA NA NA NA NA NA chr7 - 44922011 44922035 3'utr PURB Ensembl G15018.1 ACTATTTCTCTACTCTCATCATCC 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr7:44922011-44922035 NA NA NA NA UAUU minimal chr7 - 44922205 44922238 3'utr PURB Ensembl G15019.1 TATTATTCAATCTATACAATCTTTTTGTATTTA 10 7 10 103 1 1 0 0.111111111 0.2 8 0 0 10 chr7:44922205-44922238 minimal NA NA AUUUA UAUU minimal chr7 - 44922239 44922265 3'utr PURB Ensembl G15020.1 CATATCCTTTTTATTATCTTATTTTG 62 12 57 822 0.876923077 1.153814864 0 0.357142857 0.584615385 27 5 3 57 chr7:44922239-44922265 minimal NA NA NA UAUU minimal chr7 - 44922265 44922286 3'utr PURB Ensembl G15021.1 AGCTGCCTTTTTAATTTATTG 7 5 7 70 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr7:44922265-44922286 minimal NA NA AUUUA UAUU minimal chr7 - 44922298 44922336 3'utr PURB Ensembl G15022.1 CCTCCACAATCTTAGTATTTTTTTTAAACTGCATGCCT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr7:44922298-44922336 NA NA NA NA UAUU minimal chr7 - 48002358 48002382 intron HUS1 Ensembl G15030.1 TCTAATATCTATCTCTATATATTT 6 3 5 67 0.833333333 0.698970004 0 0.5 0.666666667 2 1 0 5 chr7:48002358-48002382 NA NA NA NA UAUU minimal chr7 - 50512141 50512161 3'utr FIGNL1 Ensembl G15036.1 ACACACTATTAATATTTAAG 7 2 4 45 0.571428571 0.602059991 0 0.666666667 0.857142857 1 3 0 4 chr7:50512141-50512161 minimal NA NA AUUUA UAUU minimal chr7 - 50512318 50512343 3'utr FIGNL1 Ensembl G15038.1 ATATTTAACATTAATATTTTATTTG 5 2 5 64 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:50512318-50512343 minimal NA NA AUUUA UAUU minimal chr7 - 54818207 54818232 NoAnnotation G15049.1 CTTTATTTCCCTACTTCTAATATTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr7:54818207-54818232 minimal NA NA NA UAUU minimal chr7 - 54820159 54820183 intron SEC61G Ensembl G15050.1 CATTTCAAATAATAATAATTATTA 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:54820159-54820183 minimal NA NA NA UAUU minimal chr7 - 63953518 63953540 NoAnnotation G15054.1 TCTAATTTATAAATATTTTTAT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr7:63953518-63953540 minimal NA NA AUUUA UAUU minimal chr1 - 156044165 156044191 NoAnnotation G1506.1 TTCTTTATAATTTAATATTCTATTTT 6 5 5 84 0.714285714 0.397940009 0 0 0 7 1 1 5 chr1:156044165-156044191 minimal NA NA AUUUA UAUU minimal chr7 - 75956673 75956696 3'utr YWHAG Ensembl G15065.1 ATTACTCCTCCATTACTCTATTG 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr7:75956673-75956696 NA NA NA NA UAUU minimal chr7 - 81964243 81964267 intron CACNA2D1 Ensembl G15080.1 TTATTTTATATTACTATTATATTT 2 2 2 29 1 0.301029996 0 0 0 2 0 0 2 chr7:81964243-81964267 minimal NA NA NA UAUU minimal chr7 - 82564118 82564140 intron PCLO Ensembl G15086.1 CTATCATATAAAAATATATTTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr7:82564118-82564140 NA NA NA NA UAUU minimal chr7 - 82575219 82575248 intron PCLO Ensembl G15089.1 ACATATTAAACATTTCCTAATTATTTATT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr7:82575219-82575248 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 91501461 91501484 NoAnnotation G15106.1 TTATAATACATTTATAATTTATT 5 3 5 57 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr7:91501461-91501484 minimal NA NA AUUUA UAUU minimal chr7 - 91501548 91501576 NoAnnotation G15107.1 CTTTATACATAATTCACATATTCAATTT 4 2 3 42 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr7:91501548-91501576 minimal NA NA NA UAUU minimal chr7 - 92207153 92207177 intron FAM133B Ensembl G15110.1 ACATTTTATATTTTCATATTTATG 4 4 4 52 1 0.602059991 0 0 0 4 0 0 4 chr7:92207153-92207177 minimal NA NA AUUUA UAUU minimal chr7 - 92236991 92237015 3'utr CDK6 Ensembl G15111.1 CATAAATTATTTCTATTATTATTC 27 7 23 292 0.827586207 0.903089987 0.034482759 0.4 0.689655172 9 3 2 24 chr7:92236991-92237015 minimal NA NA NA UAUU minimal chr7 - 92240551 92240579 3'utr CDK6 Ensembl G15114.1 TTATTATAAACTCTTAGATATTTATATA 23 2 22 243 0.956521739 1.342422681 0 0.454545455 0.739130435 6 1 0 22 chr7:92240551-92240579 minimal NA NA AUUUA UAUU minimal chr7 - 92240629 92240651 3'utr CDK6 Ensembl G15115.1 CCACCATAATTACTTAATTATG 5 4 5 33 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:92240629-92240651 minimal NA NA NA NA NA chr7 - 92240796 92240819 3'utr CDK6 Ensembl G15116.1 CTTCCTAATATCATAAACATATT 5 2 4 36 0.8 0.602059991 0 0 0 5 1 0 4 chr7:92240796-92240819 NA NA NA NA UAUU minimal chr7 - 93604127 93604156 intron BET1 Ensembl G15117.1 TTACTATATTTCTTTTTTAATTAATAAAT 6 4 5 87 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr7:93604127-93604156 NA NA NA NA UAUU minimal chr1 - 156691709 156691734 3'utr ISG20L2 Ensembl G1512.1 CCTCTAAAAACTCAAATTATTCCCT 4 3 4 24 1 0.602059991 0 0 0 4 0 0 4 chr1:156691709-156691734 minimal NA NA NA UAUU minimal chr7 - 96250548 96250571 NoAnnotation G15123.1 CTTAATTATACTTATTTATTACT 5 4 5 57 1 0.698970004 0 0.25 0.4 3 0 0 5 chr7:96250548-96250571 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 99488558 99488582 3'utr TRIM4 Ensembl G15130.1 CACTACTAACATTTCAATATATTT 4 3 4 29 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr7:99488558-99488582 NA NA NA NA UAUU minimal chr7 - 99691193 99691215 miRNA hsa-mir-25 miRBase G15131.1 CATTGCACTTGTCTCGGTCTGA 18 2 2 142 0.090909091 -0.397940009 0 0.25 0.727272727 6 16 4 2 chr7:99691193-99691215 NA NA NA NA NA NA chr1 - 157091481 157091505 3'utr ETV3 Ensembl G1514.1 TTTTTTATTTATTCCATAATTATG 27 9 25 357 0.925925926 1.397940009 0 0.15 0.37037037 17 2 0 25 chr1:157091481-157091505 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 100875389 100875413 3'utr CLDN15 Ensembl G15141.1 TATAAATACATTCATTAATAAATG 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:100875389-100875413 NA NA NA NA NA NA chr7 - 102090158 102090180 NoAnnotation G15143.1 CTAATTTATTTTTATTTATTAT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr7:102090158-102090180 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 103794804 103794830 intron ORC5 Ensembl G15148.1 TTCTTAATATTTTATAACTTAGATAT 4 2 4 47 1 0.602059991 0 0 0 4 0 0 4 chr7:103794804-103794830 minimal NA NA NA UAUU minimal chr7 - 103833720 103833746 intron ORC5 Ensembl G15149.1 TCTTACATTTTACTTCTATATTTATT 6 3 4 87 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr7:103833720-103833746 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 157094128 157094151 3'utr ETV3 Ensembl G1515.1 CTTCTTTATAATTATTTCAGGGA 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:157094128-157094151 minimal NA NA NA UAUU minimal chr7 - 104953418 104953446 intron SRPK2 Ensembl G15156.1 TAATTTTATTATTCCTTATTTATTTATT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr7:104953418-104953446 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 157094508 157094531 3'utr ETV3 Ensembl G1516.1 ATCATTCTAGGGGCATAGACTTG 2 2 2 11 1 0.301029996 0 0 0 2 0 0 2 chr1:157094508-157094531 NA NA NA NA NA NA chr7 - 105129071 105129097 intron PUS7 Ensembl G15161.1 TATATCCTAATTTAAACTATTACTCT 6 2 4 62 0.666666667 0.602059991 0 1 1 0 2 0 4 chr7:105129071-105129097 minimal NA NA AUUUA UAUU minimal chr7 - 107142513 107142536 repeat LINE-L1PB3 RepeatMasker G15175.1 AATTCATCACTAAATAATTTATT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:107142513-107142536 minimal NA NA AUUUA UAUU minimal chr7 - 111466339 111466367 repeat LINE-L2b RepeatMasker G15183.1 TCTATCTTTTATTTATCCCTATTTATCT 2 2 2 31 0.5 -0.176091259 0 0.333333333 0.5 2 0 2 2 chr7:111466339-111466367 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 159888526 159888556 3'utr TAGLN2 Ensembl G1519.1 AATGGTTAATATATATGTAGATATATATTT 15 3 13 159 0.866666667 1.113943352 0 0.625 0.8 3 2 0 13 chr1:159888526-159888556 NA NA NA NA UAUU minimal chr7 - 120964667 120964692 NoAnnotation G15200.1 CTTAATTTCCTATTTATTATATTTT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:120964667-120964692 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 122978204 122978227 NoAnnotation G15206.1 ATACTCCATACACTTATCTATTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr7:122978204-122978227 minimal NA NA NA UAUU minimal chr1 - 159997960 159997990 3'utr PIGM Ensembl G1521.1 TTTTATAATTATATTTACTTACTAATTATT 11 6 9 148 0.692307692 0.477121255 0 0.083333333 0.153846154 11 2 2 9 chr1:159997960-159997990 minimal NA NA AUUUA UAUU minimal chr7 - 123135526 123135549 intron IQUB Ensembl G15210.1 TTTCATTACATACTATTTTTTTT 3 2 3 36 1 0.477121255 0 0 0 3 0 0 3 chr7:123135526-123135549 NA NA NA NA UAUU minimal chr7 - 123322464 123322488 3'utr WASL Ensembl G15215.1 TAATTAATTTATTCTTTTTTTCTT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr7:123322464-123322488 minimal NA NA AUUUA UAUU minimal chr7 - 123323275 123323304 3'utr WASL Ensembl G15217.1 CTAATTATCATACCTACCTACTTTAAATT 5 5 5 43 0.625 0.096910013 0 0.166666667 0.375 5 0 3 5 chr7:123323275-123323304 minimal NA NA NA NA NA chr1 - 159998098 159998123 3'utr PIGM Ensembl G1522.1 CATTCTTACCTTTTTTTCCTATTCT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr1:159998098-159998123 NA NA NA NA UAUU minimal chr7 - 126984151 126984180 NoAnnotation G15226.1 ATTTTTCTCTCTTCCTTTATAATATTTAT 3 3 3 48 1 0.477121255 0 0 0 3 0 0 3 chr7:126984151-126984180 minimal NA NA AUUUA UAUU minimal chr7 - 126989351 126989376 NoAnnotation G15228.1 TATTAACTTAAAATTTTAAATTAAT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr7:126989351-126989376 NA NA NA NA UAUU minimal chr7 - 127000878 127000905 NoAnnotation G15230.1 TCTTTATTCCTAACTTAATTATACTCC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr7:127000878-127000905 minimal NA NA NA UAUU minimal chr7 - 127010230 127010250 3'utr ZNF800 Ensembl G15232.1 ATTTACTTTCCCACATATTG 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr7:127010230-127010250 minimal NA NA AUUUA UAUU minimal chr7 - 127011347 127011374 3'utr ZNF800 Ensembl G15235.1 TATCAACACATTATAAATATTTAGCTT 5 2 5 45 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr7:127011347-127011374 minimal NA NA AUUUA UAUU minimal chr7 - 127013085 127013116 intron ZNF800 Ensembl G15236.1 TTGTAAAATATATACATTTATATTGGCTTAT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr7:127013085-127013116 minimal NA NA AUUUA UAUU minimal chr7 - 127950563 127950590 3'utr RBM28 Ensembl G15239.1 TCTATAATTATTACCAATTTTTATTCT 7 3 5 92 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr7:127950563-127950590 minimal NA NA NA UAUU minimal chr7 - 129839797 129839820 intron TMEM209 Ensembl G15249.1 TCCCAATATTATAAATTATTTTT 3 2 3 19 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:129839797-129839820 minimal NA NA NA UAUU minimal chr1 - 160248040 160248061 3'utr PEX19 Ensembl G1525.1 TATTATATTTTAACCTTTTAC 5 2 5 55 1 0.698970004 0 0.5 0.8 1 0 0 5 chr1:160248040-160248061 minimal NA NA NA UAUU minimal chr7 - 132469819 132469842 3'utr CHCHD3 Ensembl G15256.1 CTATTTCATTATAACTTATTATG 12 6 11 124 0.846153846 0.740362689 0 0.444444444 0.615384615 5 1 1 11 chr7:132469819-132469842 minimal NA NA NA UAUU minimal chr1 - 160251698 160251723 intron PEX19 Ensembl G1526.1 CTTTTTTTCCTTCTTTATTTATTTG 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr1:160251698-160251723 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 132723027 132723050 intron CHCHD3 Ensembl G15263.1 CATTTTTCTATAATATAATATAT 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:132723027-132723050 NA NA NA NA NA NA chr1 - 160698339 160698361 repeat LINE-L2c RepeatMasker G1527.1 TTTTCTTTCTTCTTTTCTAGTA 4 2 2 58 0.5 0.301029996 0 0 0 4 2 0 2 chr1:160698339-160698361 NA NA NA NA NA NA chr7 - 134848016 134848043 NoAnnotation G15271.1 TAATATTCTACCAATATTTTCTTCCTG 3 3 3 25 1 0.477121255 0 0 0 3 0 0 3 chr7:134848016-134848043 NA NA NA NA UAUU minimal chr7 - 135047109 135047135 3'utr CNOT4 Ensembl G15273.1 CTTTTAATTTAAATTAATTTTTAATT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr7:135047109-135047135 minimal NA NA AUUUA NA minimal chr7 - 135056311 135056335 intron CNOT4 Ensembl G15275.1 CCAAACACATCTACTTATATTTTG 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr7:135056311-135056335 minimal NA NA NA UAUU minimal chr7 - 135070740 135070762 intron CNOT4 Ensembl G15277.1 CTTTCCTTTTCATTCTATTATT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr7:135070740-135070762 minimal NA NA NA UAUU minimal chr7 - 135071315 135071336 3'utr CNOT4 Ensembl G15278.1 TTTTAAAAAACCTGAAGCTTT 4 2 2 30 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr7:135071315-135071336 NA NA NA NA NA NA chr7 - 135071891 135071934 3'utr CNOT4 Ensembl G15279.1 CCAATAAAATACTGTAGACTTATTAATATTGTAGACTTATTAT 6 4 5 55 0.833333333 0.698970004 0 0 0 6 1 0 5 chr7:135071891-135071934 minimal NA NA NA UAUU minimal chr1 - 161070413 161070440 3'utr PFDN2 Ensembl G1528.1 ACTCCCACTTCTAATTTCTCTTTATTG 9 5 9 86 0.818181818 0.477121255 0 0.222222222 0.363636364 7 0 2 9 chr1:161070413-161070440 minimal NA NA NA UAUU minimal chr7 - 135071983 135072009 3'utr CNOT4 Ensembl G15280.1 CATAAACATCAATCTCTAATTTCTAT 4 4 4 31 1 0.602059991 0 0 0 4 0 0 4 chr7:135071983-135072009 NA NA NA NA NA NA chr7 - 135166856 135166881 intron CNOT4 Ensembl G15284.1 TATCTATCACCTTTAATATTTATTA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr7:135166856-135166881 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 135612681 135612709 3'utr MTPN Ensembl G15285.1 AATTTTTCCCTTTATATAATTTTCACCT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr7:135612681-135612709 minimal NA NA NA NA NA chr7 - 135613339 135613367 3'utr MTPN Ensembl G15286.1 CTTAAATTTTATATCTTACATTTAAAAT 5 3 5 60 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr7:135613339-135613367 minimal NA NA AUUUA NA minimal chr7 - 135613974 135613997 3'utr MTPN Ensembl G15288.1 TTTATTTATAAAATCTTAAGTTT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr7:135613974-135613997 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 161084510 161084539 repeat SINE-MIR RepeatMasker G1529.1 AATTTCATTTCTACTATTTACTATTTATA 3 3 3 42 1 0.477121255 0 0 0 3 0 0 3 chr1:161084510-161084539 minimal NA NA AUUUA UAUU minimal chr7 - 138611558 138611587 repeat LINE-L1ME3E RepeatMasker G15294.1 TATTATTTTCATAACATATATATATATTT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:138611558-138611587 minimal NA NA NA UAUU minimal chr7 - 139246866 139246894 3'utr HIPK2 Ensembl G15298.1 AATTGTCCCTCTTTTTTATTTATAAATG 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr7:139246866-139246894 UUAUUUAU NA NA AUUUA UAUU minimal chr7 - 139250197 139250226 3'utr HIPK2 Ensembl G15299.1 ATTTTTAATTTTTTAAAATAACTATTATC 6 3 4 71 0.571428571 0.301029996 0 0.166666667 0.285714286 5 2 1 4 chr7:139250197-139250226 minimal NA NA NA UAUU minimal chr1 - 161141225 161141254 3'utr B4GALT3 Ensembl G1530.1 AATATTTATTCTATTTATGGTTCCCGGGA 4 2 2 48 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr1:161141225-161141254 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 139254555 139254580 3'utr HIPK2 Ensembl G15300.1 TTTCTCTTTAATATTTAAACTTATT 5 2 4 64 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr7:139254555-139254580 minimal NA NA AUUUA UAUU minimal chr7 - 140033776 140033798 3'utr SLC37A3 Ensembl G15302.1 TATATACATATTTTAAATTATG 5 2 3 52 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr7:140033776-140033798 minimal NA NA NA UAUU minimal chr7 - 140044558 140044585 repeat DNA-MamRep137 RepeatMasker G15303.1 ATTACTTACTTTATTTATTATTTATTT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr7:140044558-140044585 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr7 - 140086577 140086600 rRNA rRNA-5S RepeatMasker G15304.1 AATACCGGGTGCTGTAGGCTTTA 44 2 2 302 0.037735849 -0.698970004 0 0.315789474 0.754716981 13 42 9 2 chr7:140086577-140086600 NA NA NA NA NA NA chr7 - 140555914 140555938 intron BRAF Ensembl G15306.1 CTTTTAATATATATATTTATATAT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr7:140555914-140555938 minimal NA NA AUUUA UAUU minimal chr7 - 140702462 140702493 intron MRPS33 Ensembl G15307.1 CATCATATATTTAAACATATATAACCATAAT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr7:140702462-140702493 minimal NA NA AUUUA UAUU minimal chr7 - 143546120 143546147 NoAnnotation G15311.1 CAATTCATTATTATCTTTCTATTTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr7:143546120-143546147 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 148595792 148595815 NoAnnotation G15321.1 TACCTGGTTGATCCTGACAGTAG 19 2 2 131 0.043478261 -1.146128036 0.02173913 0.416666667 0.847826087 7 17 27 2 chr7:148595792-148595815 NA NA NA NA NA NA chr7 - 148841029 148841051 NoAnnotation G15327.1 CTTATTTTTAATTTATAATATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr7:148841029-148841051 minimal NA NA AUUUA UAUU minimal chr7 - 149181789 149181817 intron ZNF746 Ensembl G15330.1 AATAATTTTTTTCTTTTTAAATATTTAT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr7:149181789-149181817 minimal NA NA AUUUA UAUU minimal chr7 - 149297676 149297698 repeat LINE-L1ME3 RepeatMasker G15333.1 TCTATACCTTATTGTTAGTTAT 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:149297676-149297698 minimal NA NA NA UAUU minimal chr7 - 152016308 152016333 intron MLL3 Ensembl G15346.1 ATCTATATAACTATTCTTATTTTAT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr7:152016308-152016333 minimal NA NA NA UAUU minimal chr7 - 152342315 152342344 repeat LINE-L1ME3D RepeatMasker G15349.1 AATTTTAAATATATATAATATTTAATCAT 14 9 13 158 0.928571429 1.113943352 0 0.166666667 0.285714286 10 1 0 13 chr7:152342315-152342344 minimal NA NA AUUUA UAUU minimal chr7 - 158414417 158414437 NoAnnotation G15367.1 ATTATTTTCAATATTTATTG 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr7:158414417-158414437 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr7 - 158465923 158465947 intron NCAPG2 Ensembl G15370.1 TTTATTTATTTTCCTCTCTCCCCC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr7:158465923-158465947 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 187286 187309 repeat Low_complexity-AT_rich RepeatMasker G15375.1 TCATTCATTACATTATTTTATTA 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr8:187286-187309 minimal NA NA NA UAUU minimal chr8 + 1730665 1730686 3'utr CLN8 Ensembl G15378.1 TAACCTATTTATCACATTTTA 6 4 5 51 0.833333333 0.698970004 0.333333333 0.2 0.333333333 4 1 0 5 chr8:1730665-1730686 minimal NA NA AUUUA UAUU minimal chr8 + 1734587 1734609 3'utr CLN8 Ensembl G15380.1 CTTATTAATTCCATATTTATCA 29 5 26 293 0.9 1.130333768 0.033333333 0.583333333 0.833333333 5 2 1 27 chr8:1734587-1734609 minimal NA NA AUUUA UAUU minimal chr8 + 6303121 6303142 intron MCPH1 Ensembl G15386.1 CATCCATATTTTAAATTTATC 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr8:6303121-6303142 minimal NA NA AUUUA UAUU minimal chr8 + 6303675 6303698 intron MCPH1 Ensembl G15387.1 TTTACTCCTATTCATAATTTAAT 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr8:6303675-6303698 minimal NA NA AUUUA UAUU minimal chr8 + 6303700 6303728 intron MCPH1 Ensembl G15388.1 TAATTATAATAAACCATATCATTTTATT 4 2 4 40 1 0.602059991 0 0 0 4 0 0 4 chr8:6303700-6303728 minimal NA NA NA UAUU minimal chr1 - 169433185 169433207 3'utr SLC19A2 Ensembl G1539.1 ATTATAAAATTATTTTTATTAA 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:169433185-169433207 minimal NA NA NA UAUU minimal chr8 + 6608753 6608776 intron AGPAT5 Ensembl G15392.1 TATTAAATATTATCTCTATATAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr8:6608753-6608776 minimal NA NA NA UAUU minimal chr8 + 6615486 6615507 3'utr AGPAT5 Ensembl G15393.1 ATTTTACTCATTTTATATTTG 3 3 3 36 1 0.477121255 1 0 0 3 0 0 3 chr8:6615486-6615507 minimal NA NA NA UAUU minimal chr8 + 6615507 6615531 3'utr AGPAT5 Ensembl G15394.1 CAAAATAAATTTCTAATATTTATT 14 6 13 134 0.866666667 0.812913357 0.066666667 0.166666667 0.333333333 10 1 1 13 chr8:6615507-6615531 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 8889794 8889824 3'utr ERI1 Ensembl G15397.1 TTACTTAGTATTTACAAACAATTTATTATT 2 2 2 23 1 0.301029996 0.5 0 0 2 0 0 2 chr8:8889794-8889824 minimal NA NA AUUUA UAUU minimal chr8 + 9639390 9639418 3'utr TNKS Ensembl G15402.1 TATTTATCTATTTGTAGGATTGTCAGAT 11 4 6 145 0.428571429 0.176091259 0 0.2 0.428571429 8 5 3 6 chr8:9639390-9639418 minimal NA NA AUUUA UAUU minimal chr8 + 11157759 11157784 repeat LINE-L1M5 RepeatMasker G15405.1 ACTTATCCATTCCTAATCTTAATAT 4 3 4 38 1 0.602059991 0 0 0 4 0 0 4 chr8:11157759-11157784 minimal NA NA NA NA NA chr8 + 15602301 15602327 intron TUSC3 Ensembl G15414.1 ACATACTATTTTTTTAATAATTTATT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr8:15602301-15602327 minimal NA NA AUUUA UAUU minimal chr8 + 16978100 16978129 repeat Low_complexity-AT_rich RepeatMasker G15417.1 TACTTTCAATATTATTTTTTTATTTATTC 3 3 3 53 1 0.477121255 0 0 0 3 0 0 3 chr8:16978100-16978129 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 17425214 17425256 3'utr SLC7A2 Ensembl G15426.1 CTTATACCTAATTTTTAGTTTTTAAACTATTTTAAAATATAC 31 8 27 402 0.870967742 1.431363764 0 0.294117647 0.612903226 12 4 0 27 chr8:17425214-17425256 minimal NA NA NA UAUU minimal chr8 + 17426507 17426533 3'utr SLC7A2 Ensembl G15427.1 AATCTATTTTTACCTATTTTCTAAAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr8:17426507-17426533 NA NA NA NA UAUU minimal chr8 + 17795447 17795479 intron PCM1 Ensembl G15428.1 TATCATTTATTTATATCTATTTATCAATTATT 6 5 5 82 0.833333333 0.698970004 0 0 0 6 1 0 5 chr8:17795447-17795479 UUAUUUAU NA NA AUUUA UAUU minimal chr8 + 21863707 21863730 repeat Low_complexity-AT_rich RepeatMasker G15436.1 TATTTAACATTCTCCCATCCCTT 23 4 21 187 0.807692308 0.720159303 0 0.571428571 0.769230769 6 2 3 21 chr8:21863707-21863730 minimal NA NA AUUUA UAUU minimal chr8 + 22279212 22279235 3'utr SLC39A14 Ensembl G15438.1 TATTAAATTTATAATTTTAGCAT 4 2 4 40 1 0.602059991 0 0 0 4 0 0 4 chr8:22279212-22279235 minimal NA NA AUUUA UAUU minimal chr8 + 23429810 23429831 3'utr SLC25A37 Ensembl G15447.1 TTTATCCTTTATTTTTCTATG 2 2 2 25 1 0.301029996 1 0 0 2 0 0 2 chr8:23429810-23429831 minimal NA NA NA UAUU minimal chr1 - 169998160 169998188 intron KIFAP3 Ensembl G1545.1 TCTATCCTTTTATTTTTAATATATTTAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr1:169998160-169998188 minimal NA NA AUUUA UAUU minimal chr8 + 26157427 26157449 intron PPP2R2A Ensembl G15455.1 TCTTATTTAATATCCTTACCTT 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr8:26157427-26157449 minimal NA NA AUUUA UAUU minimal chr8 + 26228917 26228937 3'utr PPP2R2A Ensembl G15461.1 TCTCTATTTAACTCATTATG 9 3 8 82 0.888888889 0.903089987 1 0.75 0.888888889 1 1 0 8 chr8:26228917-26228937 minimal NA NA AUUUA UAUU minimal chr8 + 26229733 26229753 3'utr PPP2R2A Ensembl G15462.1 CACTTTTACTAATTTATTTG 4 3 4 40 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr8:26229733-26229753 minimal NA NA AUUUA UAUU minimal chr8 + 27662320 27662341 repeat Low_complexity-AT_rich RepeatMasker G15467.1 CACTTATTTCTTTTAAATATT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:27662320-27662341 minimal NA NA NA UAUU minimal chr8 + 27662957 27662978 intron ESCO2 Ensembl G15470.1 AACTATTTCTATTTTAAATAT 5 3 4 51 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr8:27662957-27662978 NA NA NA NA UAUU minimal chr8 + 28422865 28422890 3'utr FZD3 Ensembl G15475.1 CCAAACATATAACAACTTATTTATC 6 2 2 44 0.333333333 0.301029996 0 0.5 0.666666667 2 4 0 2 chr8:28422865-28422890 UUAUUUAU NA NA AUUUA UAUU minimal chr8 + 28425350 28425373 3'utr FZD3 Ensembl G15477.1 ATATTCATTTTATTTTTCCTTTT 3 3 3 43 1 0.477121255 0.333333333 0 0 3 0 0 3 chr8:28425350-28425373 minimal NA NA NA UAUU minimal chr8 + 28426719 28426742 3'utr FZD3 Ensembl G15479.1 CTTAATAATTTCTATTTTCTATC 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:28426719-28426742 NA NA NA NA UAUU minimal chr8 + 28428923 28428946 3'utr FZD3 Ensembl G15481.1 TATACTTAAAAATACTCTATTTT 4 3 4 36 1 0.602059991 0 0 0 4 0 0 4 chr8:28428923-28428946 NA NA NA NA UAUU minimal chr8 + 28608691 28608716 3'utr EXTL3 Ensembl G15484.1 TTTTTACATTCAATAACAACTATTA 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:28608691-28608716 NA NA NA NA UAUU minimal chr8 + 30040856 30040892 3'utr DCTN6 Ensembl G15490.1 TAATTTATATAAATGTATTATTTTCCTATATCCTTG 9 3 9 102 1 0.954242509 0.777777778 0.5 0.777777778 2 0 0 9 chr8:30040856-30040892 minimal NA NA AUUUA UAUU minimal chr8 + 30058143 30058164 repeat LTR-MER4E1 RepeatMasker G15493.1 CTTTTATTTAACACTATCTAT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:30058143-30058164 minimal NA NA AUUUA UAUU minimal chr8 + 31031213 31031235 3'utr WRN Ensembl G15498.1 TATTTTATATACAATTTCTATT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:31031213-31031235 minimal NA NA NA UAUU minimal chr1 + 40980440 40980461 coding DEM1 Ensembl G155.1 ATTCCACCTTAAATATTTATA 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr1:40980440-40980461 minimal NA NA AUUUA UAUU minimal chr1 - 173445741 173445763 lincRNA AL645568.1 Ensembl G1550.1 AACTAAACTTTTATTTATTTTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:173445741-173445763 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 33358754 33358774 NoAnnotation G15503.1 TACAATAAATCATATTTATG 9 3 8 64 0.888888889 0.903089987 1 0.5 0.777777778 2 1 0 8 chr8:33358754-33358774 minimal NA NA AUUUA UAUU minimal chr8 + 37556314 37556370 3'utr ZNF703 Ensembl G15508.1 CCCTTCCCCACCGGACTGTGTATTTATTTACTATAATGTTAGCTTACAAGCTGGGA 67 6 63 766 0.887323944 1.100370545 0.084507042 0.375 0.788732394 15 4 4 63 chr8:37556314-37556370 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 37556410 37556451 3'utr ZNF703 Ensembl G15509.1 AAAAAGTCTGTGTTCTCCCAAATAATAATATTAATCCCACA 233 9 210 1715 0.893617021 1.84509804 0 0.483333333 0.868085106 31 23 2 210 chr8:37556410-37556451 NA NA NA NA UAUU minimal chr1 - 173764203 173764233 NoAnnotation G1551.1 TTTTTCCATTTATTTAATCTTTAAATATTT 7 3 3 106 0.428571429 0.477121255 0 0 0 7 4 0 3 chr1:173764203-173764233 minimal NA NA AUUUA UAUU minimal chr8 + 37556507 37556532 3'utr ZNF703 Ensembl G15510.1 TTTTACATTTTTTATTCCTTTTCCT 6 4 4 94 0.666666667 0.602059991 0 0 0 6 2 0 4 chr8:37556507-37556532 minimal NA NA NA UAUU minimal chr8 + 37901948 37901969 intron EIF4EBP1 Ensembl G15514.1 CCTTACTAATTTTATTTTATT 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr8:37901948-37901969 minimal NA NA NA UAUU minimal chr8 + 38070413 38070440 3'utr BAG4 Ensembl G15518.1 ATTTTCTATTTCTCTCAATCCTTCTAC 7 3 5 83 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr8:38070413-38070440 NA NA NA NA UAUU minimal chr1 - 173764902 173764923 NoAnnotation G1552.1 AAAAACTCTAATATTACATTT 3 2 3 19 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:173764902-173764923 NA NA NA NA UAUU minimal chr8 + 38950828 38950853 intron ADAM9 Ensembl G15524.1 TTAAATTTATTCCTATATTATTTAT 3 2 3 40 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:38950828-38950853 UUAUUUAU NA NA AUUUA UAUU minimal chr8 + 41367919 41367946 repeat Low_complexity-AT_rich RepeatMasker G15529.1 TATAAAAAATATTTTAATTATAGTTTT 6 4 5 58 0.833333333 0.698970004 0.333333333 0 0 6 1 0 5 chr8:41367919-41367946 minimal NA NA NA UAUU minimal chr8 + 42027983 42028004 3'utr AP3M2 Ensembl G15531.1 TTACTATTTAAATATTTATAC 11 4 10 110 0.909090909 1 0 0.25 0.454545455 6 1 0 10 chr8:42027983-42028004 minimal NA NA AUUUA UAUU minimal chr8 + 42214376 42214399 intron POLB Ensembl G15532.1 CCCTAACTTAAATATATTTATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:42214376-42214399 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 42229213 42229234 3'utr POLB Ensembl G15533.1 TCTTAATTTATTTCTTAACCT 4 3 4 42 1 0.602059991 0 0 0 4 0 0 4 chr8:42229213-42229234 minimal NA NA AUUUA UAUU minimal chr8 + 42973828 42973858 intron AC113191.1 Ensembl G15536.1 ACTAATAGTATTTCATAATAATATTTAATA 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr8:42973828-42973858 minimal NA NA AUUUA UAUU minimal chr8 + 42981751 42981772 NoAnnotation G15539.1 CTTTACTTAGTTTAATATTCT 4 2 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:42981751-42981772 NA NA NA NA UAUU minimal chr1 - 173766038 173766072 NoAnnotation G1554.1 TATCTATTTTAATTTAATTTACTTTTATTTTATT 3 3 3 46 1 0.477121255 0 0 0 3 0 0 3 chr1:173766038-173766072 minimal NA NA AUUUA UAUU minimal chr8 + 42981802 42981828 NoAnnotation G15540.1 TAATATATATTATCCCATTCTCTCCT 11 5 10 107 0.909090909 1 0 0.375 0.545454545 5 1 0 10 chr8:42981802-42981828 minimal NA NA NA UAUU minimal chr8 + 42985137 42985158 repeat LINE-L2c RepeatMasker G15544.1 ACCTTTACATCTATTTTATTT 8 2 4 87 0.5 0.602059991 0.125 0.5 0.75 2 4 0 4 chr8:42985137-42985158 minimal NA NA NA UAUU minimal chr8 + 42986231 42986251 NoAnnotation G15545.1 TACCACACTCTTCATTTACC 5 3 4 31 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr8:42986231-42986251 minimal NA NA AUUUA NA minimal chr8 + 48955748 48955771 intron UBE2V2 Ensembl G15548.1 TTATAAATTATATTTTTTCTATT 5 4 5 67 1 0.698970004 0 0.25 0.4 3 0 0 5 chr8:48955748-48955771 minimal NA NA NA UAUU minimal chr8 + 48974215 48974240 3'utr UBE2V2 Ensembl G15549.1 TATACACACTTTTATTTACCCTATT 10 3 9 87 0.9 0.954242509 0 0.285714286 0.5 5 1 0 9 chr8:48974215-48974240 minimal NA NA AUUUA UAUU minimal chr8 + 53356326 53356349 NoAnnotation G15558.1 TTTTTTAATTTTCTTTTAAAATT 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:53356326-53356349 NA NA NA NA NA NA chr1 - 173768891 173768917 3'utr CENPL Ensembl G1556.1 TCTTTAAAACCTTTAATCTCTTTTAA 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr1:173768891-173768917 NA NA NA NA NA NA chr8 + 54993139 54993159 repeat Low_complexity-AT_rich RepeatMasker G15560.1 ATATTTATTTATTTATTACG 3 2 2 34 0.666666667 0.301029996 1 0 0 3 1 0 2 chr8:54993139-54993159 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 55064080 55064104 repeat LTR-MER41B RepeatMasker G15563.1 CCATTCTCTTATTCCTTTATTATT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:55064080-55064104 minimal NA NA NA UAUU minimal chr8 + 55075163 55075184 NoAnnotation G15565.1 ATCCTTATTATATATATTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr8:55075163-55075184 minimal NA NA NA UAUU minimal chr1 - 173776575 173776597 coding CENPL Ensembl G1557.1 TTTAACTCCCTTATATAAATTC 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:173776575-173776597 minimal NA NA NA NA NA chr8 + 59494846 59494867 3'utr SDCBP Ensembl G15570.1 ATTCTTAAATTTTAACTACCT 4 3 3 35 0.75 0.477121255 0 0 0 4 1 0 3 chr8:59494846-59494867 NA NA NA NA NA NA chr8 + 64122763 64122790 lincRNA YTHDF3 Ensembl G15578.1 AAAAATTATTGTAGTAAACTTTTAATA 5 4 5 46 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr8:64122763-64122790 minimal NA NA NA UAUU minimal chr8 + 64122926 64122950 lincRNA YTHDF3 Ensembl G15579.1 CACATTCTTCTTCCCTCCTCCCCC 7 3 5 51 0.714285714 0.698970004 0 0.75 0.857142857 1 2 0 5 chr8:64122926-64122950 NA NA NA NA NA NA chr8 + 64123374 64123398 lincRNA YTHDF3 Ensembl G15581.1 TTATCTTTTTAACATCTTATTTTT 3 2 2 45 1 0.477121255 0 0 0 3 0 0 3 chr8:64123374-64123398 minimal NA NA NA UAUU minimal chr8 + 64123719 64123741 lincRNA YTHDF3 Ensembl G15582.1 CTTTCATTTATATAATTTTATT 27 6 26 344 0.962962963 1.414973348 0 0.5 0.703703704 8 1 0 26 chr8:64123719-64123741 minimal NA NA AUUUA UAUU minimal chr8 + 64124874 64124911 lincRNA YTHDF3 Ensembl G15584.1 TTTTCCTAATTTTAGTACTTAATTTCTCTTTTTAATT 9 4 9 110 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr8:64124874-64124911 NA NA NA NA NA NA chr8 + 66559978 66560003 intron MTFR1 Ensembl G15586.1 AACTATTCTTTTATATATTTATTAG 3 2 3 39 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr8:66559978-66560003 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 77768902 77768926 intron ZFHX4 Ensembl G15609.1 AAACATTAAATAATATATTTATTG 5 2 5 45 0.833333333 0.397940009 0.666666667 0.5 0.666666667 2 0 1 5 chr8:77768902-77768926 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 77778643 77778664 3'utr ZFHX4 Ensembl G15613.1 CAATCTTTATTCTATACATTT 6 4 5 59 0.833333333 0.698970004 0 0 0 6 1 0 5 chr8:77778643-77778664 minimal NA NA NA UAUU minimal chr8 + 77778712 77778735 repeat Low_complexity-AT_rich RepeatMasker G15614.1 TATTTTAACATTTATTTTAATCC 8 4 8 96 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr8:77778712-77778735 minimal NA NA AUUUA UAUU minimal chr8 + 81432198 81432220 repeat Simple_repeat-(TTTTTA)n RepeatMasker G15621.1 TTCTATTTTTATTTTTATTAAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr8:81432198-81432220 minimal NA NA NA UAUU minimal chr8 + 81433007 81433028 3'utr ZBTB10 Ensembl G15622.1 CTTTATTATTCTATAAATTCT 4 2 3 45 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr8:81433007-81433028 minimal NA NA NA UAUU minimal chr8 + 81433198 81433219 3'utr ZBTB10 Ensembl G15623.1 CTTTCTTTTAAATAAAAATTG 2 2 2 18 1 0.301029996 1 0 0 2 0 0 2 chr8:81433198-81433219 NA NA NA NA NA NA chr8 + 81433221 81433246 3'utr ZBTB10 Ensembl G15624.1 TATATTTTCCTATTTTATATCAGGT 10 4 10 120 1 1 0.5 0.285714286 0.5 5 0 0 10 chr8:81433221-81433246 minimal NA NA NA UAUU minimal chr8 + 81433684 81433712 3'utr ZBTB10 Ensembl G15625.1 ATTTCTTTCATCCCATTTATCCCCTTCC 8 3 7 84 0.777777778 0.544068044 0 0.285714286 0.444444444 5 1 1 7 chr8:81433684-81433712 minimal NA NA AUUUA NA minimal chr8 + 81433836 81433862 3'utr ZBTB10 Ensembl G15626.1 AAACTGGACTTGGCTTTACATTCTTA 5 4 5 37 1 0.698970004 0 0.25 0.4 3 0 0 5 chr8:81433836-81433862 NA NA NA NA NA NA chr1 - 173834542 173834567 lincRNA GAS5 Ensembl G1563.1 TGTTAGTGATGATTTTAAAATTAAA 5 2 2 52 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr1:173834542-173834567 NA NA NA NA NA NA chr8 + 86126138 86126163 3'utr E2F5 Ensembl G15636.1 TAACATTTTAGACTTCTTAATAACC 11 3 11 87 1 1.041392685 0 0.142857143 0.454545455 6 0 0 11 chr8:86126138-86126163 NA NA NA NA NA NA chr8 + 87479277 87479303 3'utr WWP1 Ensembl G15639.1 TTCATCCTTTTCTACTTTATTTATTG 4 3 4 59 1 0.602059991 0.75 0 0 4 0 0 4 chr8:87479277-87479303 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 88143533 88143553 intron CNBD1 Ensembl G15645.1 TTACTCTAATTTATCTATTT 10 2 2 118 0.2 0.301029996 0 0.333333333 0.8 2 8 0 2 chr8:88143533-88143553 minimal NA NA AUUUA UAUU minimal chr8 + 91523448 91523469 lincRNA RP11-1058B10.1 Ensembl G15647.1 AATACCGGGTGCTATAGGCTT 23 2 2 133 0.08 -0.176091259 0 0.333333333 0.76 6 21 2 2 chr8:91523448-91523469 NA NA NA NA NA NA chr8 + 95877954 95877983 intron INTS8 Ensembl G15653.1 TTCTTAATATTTATCCTATTTATACTATT 4 2 2 56 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr8:95877954-95877983 minimal NA NA AUUUA UAUU minimal chr1 - 173835104 173835127 lincRNA GAS5 Ensembl G1566.1 TCTTAATTAGCTCTAACTGACTA 145 4 5 1290 0.030864198 -0.556302501 0.012345679 0.458333333 0.919753086 13 140 17 5 chr1:173835104-173835127 NA NA NA NA NA NA chr1 - 173835137 173835166 lincRNA GAS5 Ensembl G1567.1 CCTGGATGATGATAAGCAAATGCTGACTG 510 6 13 3494 0.022071307 -0.789146635 0.020373514 0.355555556 0.901528014 58 497 79 13 chr1:173835137-173835166 NA NA NA NA NA NA chr8 + 104341536 104341559 intron FZD6 Ensembl G15672.1 TTTACTTTTATATTACATATTTA 3 2 3 37 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:104341536-104341559 minimal NA NA AUUUA UAUU minimal chr8 + 104344312 104344337 3'utr FZD6 Ensembl G15674.1 AATTTAACTTTAAAAACCCACTTAT 5 3 5 40 1 0.698970004 0.8 0.333333333 0.6 2 0 0 5 chr8:104344312-104344337 minimal NA NA AUUUA NA minimal chr8 + 104438401 104438422 repeat Low_complexity-AT_rich RepeatMasker G15675.1 CCTATTAACATTCTTTTATTT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr8:104438401-104438422 minimal NA NA NA UAUU minimal chr8 + 104519221 104519247 intron RIMS2 Ensembl G15678.1 TTAAACTTTTTACTCTATTATTTAAC 5 3 5 60 1 0.698970004 0 0 0 5 0 0 5 chr8:104519221-104519247 minimal NA NA AUUUA UAUU minimal chr8 + 105266331 105266352 NoAnnotation G15684.1 CATATTCCTATACAAATTATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr8:105266331-105266352 minimal NA NA NA UAUU minimal chr8 + 110444503 110444523 intron PKHD1L1 Ensembl G15691.1 TTATTCTAGGTTATTTATTT 17 2 2 219 0.117647059 0.301029996 0 0.333333333 0.882352941 2 15 0 2 chr8:110444503-110444523 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 121479298 121479326 intron MTBP Ensembl G15717.1 CATCTTAGCTTAAACAAATTATTTATCT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr8:121479298-121479326 UUAUUUAU NA NA AUUUA UAUU minimal chr8 + 121482085 121482105 intron MTBP Ensembl G15718.1 CACCAACCTTAATATTTATT 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr8:121482085-121482105 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 + 124826643 124826669 3'utr FAM91A1 Ensembl G15724.1 TTATTTTATTTATTCCTATATTAACC 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr8:124826643-124826669 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 + 125314221 125314246 repeat Simple_repeat-(TA)n RepeatMasker G15726.1 TTCTTTTACATATATTTATATATAT 8 2 2 103 0.25 0.301029996 0 0.333333333 0.5 4 6 0 2 chr8:125314221-125314246 minimal NA NA AUUUA UAUU minimal chr8 + 126285875 126285898 intron NSMCE2 Ensembl G15729.1 CTTTTATTTAATTCTTTATTTAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr8:126285875-126285898 UUAUUUAU NA NA AUUUA UAUU minimal chr8 + 126450246 126450274 3'utr TRIB1 Ensembl G15730.1 TACTTTGTACATATATTTTACCTTTTAT 8 5 7 85 0.583333333 0.146128036 0 0.222222222 0.416666667 7 1 4 7 chr8:126450246-126450274 minimal NA NA NA UAUU minimal chr8 + 128753525 128753592 3'utr MYC Ensembl G15732.1 AATTTCAATCCTAGTATATAGTACCTAGTATTATAGGTACTATAAACCCTAATTTTTTTTATTTAAG 90 11 66 1067 0.680412371 0.916453949 0.06185567 0.345454545 0.628865979 36 24 7 66 chr8:128753525-128753592 minimal NA NA AUUUA UAUU minimal chr8 + 129010553 129010575 lincRNA PVT1 Ensembl G15734.1 ATTTAACTCCTCTCTCCTATTT 6 2 5 60 0.833333333 0.698970004 0 0.25 0.5 3 1 0 5 chr8:129010553-129010575 minimal NA NA AUUUA UAUU minimal chr8 + 146068596 146068618 3'utr ZNF7 Ensembl G15756.1 CCTTAACTTACTTATTTTATAT 21 6 16 223 0.761904762 1.204119983 0.142857143 0.307692308 0.571428571 9 5 0 16 chr8:146068596-146068618 minimal NA NA NA UAUU minimal chr1 - 173904620 173904645 3'utr RC3H1 Ensembl G1576.1 TTTCTTCTAAATATTACTTTATTTG 3 3 3 41 0.75 0.176091259 0 0 0 4 0 1 3 chr1:173904620-173904645 minimal NA NA NA UAUU minimal chr8 - 8641525 8641549 3'utr MFHAS1 Ensembl G15767.1 CCCACATTCTTAATATCTAATATT 8 4 7 71 0.777777778 0.544068044 0 0.333333333 0.555555556 4 1 1 7 chr8:8641525-8641549 NA NA NA NA UAUU minimal chr8 - 8642912 8642939 3'utr MFHAS1 Ensembl G15769.1 TTTTTTCTTTATTCTTTAATCCTCTTC 3 2 2 47 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:8642912-8642939 minimal NA NA NA UAUU minimal chr1 - 173904645 173904668 3'utr RC3H1 Ensembl G1577.1 TTTTCTACTTACTAAAATATTAG 3 3 3 27 0.75 0.176091259 0 0 0 4 0 1 3 chr1:173904645-173904668 NA NA NA NA UAUU minimal chr8 - 8643040 8643061 3'utr MFHAS1 Ensembl G15770.1 CAAATACATTTAAATTTATAC 5 2 5 35 1 0.698970004 0 0.5 0.8 1 0 0 5 chr8:8643040-8643061 minimal NA NA AUUUA NA minimal chr8 - 10581584 10581612 3'utr SOX7 Ensembl G15774.1 TTTTATATAATCTCCTATTATTTTTATC 7 4 6 97 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr8:10581584-10581612 minimal NA NA NA UAUU minimal chr8 - 10963584 10963608 intron XKR6 Ensembl G15776.1 ATATTATTCTAAAATTTTTCCTTT 5 3 5 60 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr8:10963584-10963608 minimal NA NA NA UAUU minimal chr8 - 12579489 12579511 3'utr LONRF1 Ensembl G15779.1 TCCTTATTAACTTTCTTTTATG 3 2 3 34 1 0.477121255 0 0 0 3 0 0 3 chr8:12579489-12579511 minimal NA NA NA UAUU minimal chr8 - 12940880 12940901 repeat LINE-L2c RepeatMasker G15781.1 CACCTAATAAATTTATTATTT 26 7 25 218 0.961538462 1.397940009 0 0.5 0.769230769 6 1 0 25 chr8:12940880-12940901 minimal NA NA AUUUA UAUU minimal chr8 - 12943029 12943049 3'utr DLC1 Ensembl G15783.1 CAAAACTCTTTAAATACATT 4 2 4 24 1 0.602059991 0 0.5 0.75 1 0 0 4 chr8:12943029-12943049 NA NA NA NA NA NA chr8 - 16726756 16726776 lincRNA RP11-13N12.1 Ensembl G15786.1 TAAATATTTCTCCTTAAATT 42 2 3 417 0.071428571 0.477121255 0 0.666666667 0.976190476 1 39 0 3 chr8:16726756-16726776 NA NA NA NA UAUU minimal chr8 - 17087895 17087918 3'utr CNOT7 Ensembl G15788.1 TTTTTCCCTTTTCCTAAATTAAC 4 2 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr8:17087895-17087918 NA NA NA NA NA NA chr8 - 17088829 17088851 intron CNOT7 Ensembl G15789.1 CACTAATTTATCTTTATTTTTC 5 2 5 59 1 0.698970004 0 0.5 0.8 1 0 0 5 chr8:17088829-17088851 minimal NA NA AUUUA UAUU minimal chr1 - 173906199 173906220 piRNA chr1-FR112014-29734 ncRNA.org G1579.1 TTTATATACTATTTCACATTG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:173906199-173906220 minimal NA NA NA UAUU minimal chr8 - 22879464 22879491 3'utr TNFRSF10B Ensembl G15796.1 CCTTACCTTTCTACTTTTATAATTCTG 4 3 4 47 1 0.602059991 0 0 0 4 0 0 4 chr8:22879464-22879491 minimal NA NA NA NA NA chr8 - 22879846 22879872 3'utr TNFRSF10B Ensembl G15797.1 CTTTATTTATTTATTTGGGCTACATT 4 2 3 51 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr8:22879846-22879872 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 41013670 41013691 3'utr ZNF684 Ensembl G158.1 ACTTCTTATTAAAATTAATAT 4 3 4 35 1 0.602059991 0 0 0 4 0 0 4 chr1:41013670-41013691 minimal NA NA NA UAUU minimal chr8 - 22994298 22994324 3'utr TNFRSF10D Ensembl G15801.1 TATAAATAAATATTTATTTATTTATT 3 2 2 21 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:22994298-22994324 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 26362372 26362399 3'utr PNMA2 Ensembl G15811.1 ATCATTTATCTTTCTAAATTCTATTTT 4 3 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:26362372-26362399 minimal NA NA AUUUA UAUU minimal chr8 - 26362471 26362499 3'utr PNMA2 Ensembl G15812.1 ACTTTTAAATAATTACTTATTTTTTCTG 14 4 11 174 0.785714286 1.041392685 0 0.3 0.5 7 3 0 11 chr8:26362471-26362499 minimal NA NA NA UAUU minimal chr8 - 26363519 26363547 3'utr PNMA2 Ensembl G15813.1 TTTTAAACTCTTTATTTTTTTAATTATT 5 3 4 83 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr8:26363519-26363547 minimal NA NA NA UAUU minimal chr8 - 27143295 27143321 3'utr TRIM35 Ensembl G15815.1 TATTTATCCCACCCATTAATATAATT 7 2 7 54 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr8:27143295-27143321 minimal NA NA AUUUA UAUU minimal chr8 - 27667478 27667503 3'utr PBK Ensembl G15818.1 ATCTTTCTTAAATATTCTATATTTT 6 2 6 71 1 0.77815125 0 0.25 0.5 3 0 0 6 chr8:27667478-27667503 NA NA NA NA UAUU minimal chr8 - 30462398 30462425 intron GTF2E2 Ensembl G15825.1 TATCTTTTATCTATACTTCCTTAATAT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr8:30462398-30462425 minimal NA NA NA NA NA chr8 - 30536924 30536945 3'utr GSR Ensembl G15827.1 TATTTCTTTATTTTAATCAGG 5 2 5 55 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr8:30536924-30536945 minimal NA NA NA UAUU minimal chr8 - 30643328 30643360 3'utr PPP2CB Ensembl G15828.1 CTAACTTCCACTAATCCATTATCCTTTATTTT 12 3 9 103 0.75 0.954242509 0 0.2 0.333333333 8 3 0 9 chr8:30643328-30643360 minimal NA NA NA UAUU minimal chr8 - 30643685 30643706 3'utr PPP2CB Ensembl G15829.1 CTTTTTAAAATATATGTATTT 3 2 3 17 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:30643685-30643706 NA NA NA NA UAUU minimal chr1 - 174810698 174810722 NoAnnotation G1583.1 TCTAATTTATAACTTTTATTCCCT 3 2 3 34 1 0.477121255 0 0 0 3 0 0 3 chr1:174810698-174810722 minimal NA NA AUUUA UAUU minimal chr8 - 30882646 30882667 intron PURG Ensembl G15831.1 AAAAATTACATATTTTTATTG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr8:30882646-30882667 minimal NA NA NA UAUU minimal chr1 - 174810759 174810786 NoAnnotation G1584.1 ATTTTATAAACTTAATATCATATTTTT 3 2 2 38 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:174810759-174810786 minimal NA NA NA UAUU minimal chr8 - 37256574 37256612 NoAnnotation G15840.1 ATAATTTTAGTATATTACTTAGACTCTTATGTATTTAT 7 2 6 81 0.857142857 0.77815125 0 0.2 0.428571429 4 1 0 6 chr8:37256574-37256612 minimal NA NA AUUUA UAUU minimal chr8 - 37718286 37718312 3'utr RAB11FIP1 Ensembl G15843.1 CTATTTTATTTTATTTAATTCTCTCC 4 2 3 59 0.75 0.477121255 0 0 0 4 1 0 3 chr8:37718286-37718312 minimal NA NA AUUUA UAUU minimal chr8 - 38021049 38021078 3'utr LSM1 Ensembl G15845.1 TCACTTTTATTTTTAATTATTTTACATAT 6 2 5 90 0.833333333 0.698970004 0 0.5 0.666666667 2 1 0 5 chr8:38021049-38021078 minimal NA NA NA UAUU minimal chr8 - 38131139 38131165 NoAnnotation G15846.1 TTTTATCATACTAAAATTTTATTTTG 5 5 5 65 1 0.698970004 0 0 0 5 0 0 5 chr8:38131139-38131165 minimal NA NA NA UAUU minimal chr8 - 38291879 38291899 intron FGFR1 Ensembl G15850.1 TCAACTATTTTAATAAACTG 11 3 4 84 0.363636364 0.602059991 0 0.5 0.818181818 2 7 0 4 chr8:38291879-38291899 NA NA NA NA UAUU minimal chr8 - 41788068 41788090 3'utr KAT6A Ensembl G15854.1 CATTAAATTCTCTCCTTTATTT 4 3 3 43 0.75 0.477121255 0 0 0 4 1 0 3 chr8:41788068-41788090 minimal NA NA NA UAUU minimal chr8 - 41789170 41789192 3'utr KAT6A Ensembl G15856.1 CTCCTTAAACTTATTATTATTG 42 7 35 413 0.795454545 1.06694679 0 0.523809524 0.772727273 10 7 2 35 chr8:41789170-41789192 minimal NA NA NA UAUU minimal chr8 - 42275041 42275066 3'utr SLC20A2 Ensembl G15859.1 TTACTTATATATTAAATATCTATTG 7 2 2 87 0.285714286 0.301029996 0 0.5 0.714285714 2 5 0 2 chr8:42275041-42275066 minimal NA NA NA UAUU minimal chr1 - 174981832 174981859 repeat LTR-MLT1A1 RepeatMasker G1586.1 TAAATATTATTTATAAATTCTTAGTCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:174981832-174981859 UUAUUUAU NA NA AUUUA UAUU minimal chr8 - 42386686 42386711 intron SLC20A2 Ensembl G15861.1 TCTCATATTTTTCCTTTATTCTTCT 5 3 5 45 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr8:42386686-42386711 minimal NA NA NA UAUU minimal chr8 - 42690727 42690750 NoAnnotation G15864.1 CATATTAGCATTATTATTTAACC 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:42690727-42690750 minimal NA NA AUUUA UAUU minimal chr8 - 42691886 42691907 3'utr THAP1 Ensembl G15865.1 ATAATTATTACTTTTATATTT 4 4 4 47 1 0.602059991 0 0 0 4 0 0 4 chr8:42691886-42691907 minimal NA NA NA UAUU minimal chr8 - 42692964 42692989 3'utr THAP1 Ensembl G15868.1 AATATTTTTTTAAAAAAAATTCTAT 4 3 4 44 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr8:42692964-42692989 NA NA NA NA UAUU minimal chr8 - 46951841 46951866 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15870.1 TTGGCCTCGGATAGCCGGTCCTCTG 19 2 17 112 0.80952381 0.753327667 0 0.25 0.714285714 6 2 2 17 chr8:46951841-46951866 NA NA NA NA NA NA chr8 - 46951978 46952002 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15871.1 AACCACAGGTTCAGACATTTGGTG 18 2 2 101 0.076923077 -0.653212514 0.153846154 0.166666667 0.423076923 15 16 8 2 chr8:46951978-46952002 NA NA NA NA NA NA chr8 - 47470388 47470413 NoAnnotation G15873.1 TCATTACAATATTTATACATTTTAT 2 2 2 19 1 0.301029996 0 0 0 2 0 0 2 chr8:47470388-47470413 minimal NA NA AUUUA UAUU minimal chr8 - 54744627 54744649 intron ATP6V1H Ensembl G15888.1 ATTTAAAATAATTAATTTATTA 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr8:54744627-54744649 minimal NA NA AUUUA UAUU minimal chr8 - 56755033 56755067 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15891.1 ATCTCAACCTATTCTCAAACTTTAAATGGGTAAG 133 3 3 1427 0.018867925 -0.954242509 0 0.170731707 0.786163522 34 130 26 3 chr8:56755033-56755067 NA NA NA NA UAUU minimal chr8 - 56755186 56755222 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15893.1 TCGTCCGACCTGGGTATAGGGGTGAAAGACTAATTG 1354 6 499 6623 0.310903427 0.296700005 0.076012461 0.519230769 0.968847352 50 855 251 499 chr8:56755186-56755222 NA NA NA NA NA NA chr8 - 56755243 56755265 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15894.1 ACACTCTGGTGGAGGTCCGTTG 16 2 12 76 0.75 1.079181246 0.0625 0.6 0.875 2 4 0 12 chr8:56755243-56755265 NA NA NA NA NA NA chr1 - 175923713 175923740 intron RFWD2 Ensembl G1590.1 TTTATTTTCTAATTATTCTTTTAATAT 3 3 3 50 1 0.477121255 0 0 0 3 0 0 3 chr1:175923713-175923740 minimal NA NA NA UAUU minimal chr8 - 57871164 57871188 3'utr IMPAD1 Ensembl G15902.1 CCTCTTCATACTTTTATTTATTTT 10 5 10 127 1 1 0 0.25 0.4 6 0 0 10 chr8:57871164-57871188 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 57872500 57872522 3'utr IMPAD1 Ensembl G15903.1 TATAAAATAAACCTAATCTATG 4 2 4 24 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:57872500-57872522 NA NA NA NA NA NA chr8 - 66511732 66511768 NoAnnotation G15913.1 AATTTCCTCCTTTATACTCTCATCTTTAAAATATTT 4 2 4 45 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:66511732-66511768 minimal NA NA NA UAUU minimal chr8 - 66713866 66713892 intron PDE7A Ensembl G15916.1 CTATTACTTCTATTTATTTATTTACT 3 3 3 43 1 0.477121255 0 0 0 3 0 0 3 chr8:66713866-66713892 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 67542887 67542908 3'utr VCPIP1 Ensembl G15921.1 ACATTTAATTTTTTAATTATG 10 4 9 111 0.9 0.954242509 0 0.6 0.8 2 1 0 9 chr8:67542887-67542908 minimal NA NA AUUUA NA minimal chr8 - 67545010 67545037 3'utr VCPIP1 Ensembl G15922.1 CTACCAAATACTATTTACTACTTAGTA 3 2 3 22 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr8:67545010-67545037 minimal NA NA AUUUA UAUU minimal chr8 - 67545587 67545607 3'utr VCPIP1 Ensembl G15925.1 CACTATTTTATTTTATTCTG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:67545587-67545607 minimal NA NA NA UAUU minimal chr8 - 67546248 67546276 3'utr VCPIP1 Ensembl G15926.1 TATCTTAAAATTCATACAATTATTTATT 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:67546248-67546276 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 70602572 70602606 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G15934.1 GCGGGTGTTGACGCGATGTGATTTCTGCCCAGTG 8244 9 285 51998 0.027496382 -0.87190052 0.582633864 0.531418312 0.974819103 261 7959 2121 285 chr8:70602572-70602606 NA NA NA NA NA NA chr8 - 71024378 71024398 3'utr NCOA2 Ensembl G15937.1 TCATTTATCTAATCTATATG 4 3 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:71024378-71024398 minimal NA NA AUUUA NA minimal chr8 - 72225703 72225730 intron EYA1 Ensembl G15943.1 ATTACTATTATTTTCATTATTATCATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr8:72225703-72225730 minimal NA NA NA UAUU minimal chr8 - 74194574 74194597 NoAnnotation G15946.1 TAATATCTCCCTCCTTTTAACTC 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:74194574-74194597 NA NA NA NA NA NA chr8 - 74702133 74702159 3'utr UBE2W Ensembl G15948.1 CAAATTATTTATTTTTTCCATTTAAA 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:74702133-74702159 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 74703346 74703371 3'utr UBE2W Ensembl G15949.1 TAATATATAATTTATCATTTTAGCC 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:74703346-74703371 minimal NA NA AUUUA NA minimal chr8 - 82570589 82570629 3'utr IMPA1 Ensembl G15969.1 TTATTTTTCTCTTAGTCTTCTTATTTAATTAACTTCATTG 3 3 3 46 1 0.477121255 0 0 0 3 0 0 3 chr8:82570589-82570629 minimal NA NA AUUUA UAUU minimal chr8 - 82614694 82614727 3'utr ZFAND1 Ensembl G15971.1 CAAATTCTTATATTTAATTAGCTTTCATTAGTT 21 2 19 240 0.904761905 1.278753601 0 0.5 0.761904762 5 2 0 19 chr8:82614694-82614727 minimal NA NA AUUUA UAUU minimal chr8 - 82614804 82614828 3'utr ZFAND1 Ensembl G15972.1 CTTTTTAACTTATTTCCCCTTATG 17 4 15 179 0.882352941 1.176091259 0 0.111111111 0.529411765 8 2 0 15 chr8:82614804-82614828 minimal NA NA NA UAUU minimal chr8 - 90945876 90945902 3'utr NBN Ensembl G15989.1 CTCTATTATATAAACTTTATATTTTT 16 4 15 182 0.833333333 0.698970004 0 0.214285714 0.388888889 11 1 2 15 chr8:90945876-90945902 minimal NA NA NA UAUU minimal chr1 - 179068613 179068634 3'utr ABL2 Ensembl G1599.1 TTTTTCTAATTTAATTCTCTC 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr1:179068613-179068634 minimal NA NA AUUUA NA minimal chr8 - 91637070 91637094 3'utr TMEM64 Ensembl G15993.1 TTAAAATAAACTCTTTTCCTTTTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr8:91637070-91637094 NA NA NA NA NA NA chr8 - 92007821 92007842 3'utr TMEM55A Ensembl G15996.1 ACATCTTTAAATTATTTATCC 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr8:92007821-92007842 UUAUUUAU NA NA AUUUA UAUU minimal chr8 - 93898144 93898173 3'utr C8orf83 Ensembl G15997.1 TTTTAATTAACTTATTACTCTATTAATAT 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr8:93898144-93898173 minimal NA NA NA UAUU minimal chr8 - 94264191 94264212 lincRNA RP11-163D8.1 Ensembl G15999.1 TGATGATGATGATGATTGTCT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr8:94264191-94264212 NA NA NA NA NA NA chr8 - 94742377 94742398 3'utr RBM12B Ensembl G16002.1 AATTAACTATCATTTAATTCT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr8:94742377-94742398 minimal NA NA AUUUA NA minimal chr8 - 94744027 94744052 3'utr RBM12B Ensembl G16004.1 CTTATATTTCAAAATTATTTTATTC 8 5 8 102 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr8:94744027-94744052 minimal NA NA NA UAUU minimal chr8 - 94744405 94744434 3'utr RBM12B Ensembl G16005.1 TTAATTATTTACCTCTATTTCACAAATGA 7 4 5 80 0.714285714 0.698970004 0 0 0 7 2 0 5 chr8:94744405-94744434 minimal NA NA AUUUA UAUU minimal chr8 - 94744519 94744547 3'utr RBM12B Ensembl G16006.1 ATTTTCTATACCCACAATAATATTTATG 17 9 12 171 0.666666667 0.77815125 0 0.058823529 0.111111111 16 5 1 12 chr8:94744519-94744547 minimal NA NA AUUUA UAUU minimal chr8 - 94744915 94744946 3'utr RBM12B Ensembl G16007.1 TTTTCAATAACTTCATTAAACCATATTTATG 5 4 4 51 0.8 0.602059991 0 0 0 5 1 0 4 chr8:94744915-94744946 minimal NA NA AUUUA UAUU minimal chr8 - 94745279 94745306 3'utr RBM12B Ensembl G16008.1 ATACATTTTATATTCACTTTTTTTTTT 4 3 3 59 0.6 0.176091259 0 0 0 5 1 1 3 chr8:94745279-94745306 minimal NA NA NA UAUU minimal chr8 - 94745534 94745555 3'utr RBM12B Ensembl G16009.1 TTTTTTTTAAATTATCTAATG 4 2 3 49 0.75 0.477121255 0 0 0 4 1 0 3 chr8:94745534-94745555 minimal NA NA NA NA NA chr1 - 179075122 179075149 3'utr ABL2 Ensembl G1601.1 CCTCATCTCTTAATCTATTTAATTAAG 23 8 23 233 0.92 0.884606581 0 0.4375 0.64 9 0 2 23 chr1:179075122-179075149 minimal NA NA AUUUA UAUU minimal chr8 - 95386039 95386061 intron RAD54B Ensembl G16012.1 CTATATATTTATTATATTTATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr8:95386039-95386061 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 - 95892519 95892542 3'utr CCNE2 Ensembl G16015.1 TATTATATAAACTTAACCTTTTA 11 4 10 100 0.909090909 1 0 0.5 0.727272727 3 1 0 10 chr8:95892519-95892542 minimal NA NA NA UAUU minimal chr8 - 95892859 95892882 3'utr CCNE2 Ensembl G16016.1 ACCTAAACTTCTATTTTCTTAAG 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr8:95892859-95892882 NA NA NA NA UAUU minimal chr8 - 103218279 103218300 3'utr RRM2B Ensembl G16029.1 CCATACAAAAACTTAACATTT 4 3 4 19 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:103218279-103218300 NA NA NA NA NA NA chr1 - 179075402 179075442 3'utr ABL2 Ensembl G1603.1 CCTTTTCCTTCCTTCCTTAGTTATAATTGTGGAAGCTAAT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr1:179075402-179075442 minimal NA NA NA NA NA chr8 - 103840073 103840101 3'utr AZIN1 Ensembl G16035.1 CATTTTTCATTTATTTAATTAGTAATTT 43 2 43 568 1 1.633468456 0 0.6 0.906976744 4 0 0 43 chr8:103840073-103840101 minimal NA NA AUUUA UAUU minimal chr8 - 105502533 105502558 3'utr LRP12 Ensembl G16041.1 TTTTTACAAAATAATACCTTATTTT 6 4 5 59 0.833333333 0.698970004 0 0 0 6 1 0 5 chr8:105502533-105502558 minimal NA NA NA UAUU minimal chr1 - 179075563 179075583 3'utr ABL2 Ensembl G1605.1 AATATTCTTTATTTATTTTG 7 2 5 86 0.714285714 0.698970004 0 1 1 0 2 0 5 chr1:179075563-179075583 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 179075617 179075656 3'utr ABL2 Ensembl G1606.1 CTTTTCTTCTCTCACATATTCCTCCCTACTCCCCCACCC 7 2 7 54 1 0.84509804 0 0.666666667 0.857142857 1 0 0 7 chr1:179075617-179075656 NA NA NA NA UAUU minimal chr8 - 116423191 116423223 3'utr TRPS1 Ensembl G16065.1 ATATATTATAAAATTTATTTTTTTAATTTAAG 4 3 4 57 0.8 0.301029996 0 0 0 5 0 1 4 chr8:116423191-116423223 minimal NA NA AUUUA UAUU minimal chr8 - 116423367 116423394 3'utr TRPS1 Ensembl G16067.1 ATCTTATTCCATACTTCTTTATTATTG 5 3 4 65 0.8 0.602059991 0 0 0 5 1 0 4 chr8:116423367-116423394 minimal NA NA NA UAUU minimal chr8 - 119083460 119083485 intron EXT1 Ensembl G16079.1 CACAATTATTTATTCTTCAATTATT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:119083460-119083485 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr8 - 119098342 119098363 intron EXT1 Ensembl G16081.1 CACCTTTTTATTCATTTATTT 6 2 2 76 0.333333333 0.301029996 0 0.333333333 0.666666667 2 4 0 2 chr8:119098342-119098363 minimal NA NA AUUUA UAUU minimal chr8 - 121595343 121595367 intron SNTB1 Ensembl G16087.1 CTATATTTATTAATATTATTATTT 4 2 4 50 1 0.602059991 0 1 1 0 0 0 4 chr8:121595343-121595367 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 - 124029735 124029761 intron DERL1 Ensembl G16089.1 ATAATTGGGTATCTTTTTATACTAAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr8:124029735-124029761 minimal NA NA NA NA NA chr1 - 179810037 179810063 3'utr TOR1AIP2 Ensembl G1609.1 CTATAACTTCTTTATTATTATTATTA 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:179810037-179810063 minimal NA NA NA UAUU minimal chr8 - 124261209 124261235 3'utr ZHX1 Ensembl G16091.1 CTTTCATTTTTATAAACTTTTTATTT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr8:124261209-124261235 minimal NA NA NA UAUU minimal chr8 - 124261314 124261335 3'utr ZHX1 Ensembl G16092.1 TTTATTTTCTCTAATTTAATG 4 3 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr8:124261314-124261335 minimal NA NA AUUUA UAUU minimal chr8 - 124332170 124332190 3'utr ATAD2 Ensembl G16094.1 TTTATTATAAATTATTCTTC 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr8:124332170-124332190 minimal NA NA NA UAUU minimal chr8 - 124332580 124332604 3'utr ATAD2 Ensembl G16096.1 ATACTTTTTATATACAATTTTATA 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr8:124332580-124332604 minimal NA NA NA NA NA chr8 - 124389805 124389835 intron ATAD2 Ensembl G16100.1 CAAAACCCCTTATTACATTAATATTTATTG 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr8:124389805-124389835 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr8 - 125325152 125325174 3'utr TMEM65 Ensembl G16102.1 AATACCCCATATTCATACTCCT 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr8:125325152-125325174 NA NA NA NA UAUU minimal chr8 - 131064390 131064415 3'utr ASAP1 Ensembl G16105.1 TTAATTTCTACTTTTTTTAATATTT 3 3 3 43 1 0.477121255 0 0 0 3 0 0 3 chr8:131064390-131064415 NA NA NA NA UAUU minimal chr1 - 179814017 179814039 3'utr TOR1AIP2 Ensembl G1611.1 ATTTTAATAACCAATTTATTTG 5 4 5 48 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:179814017-179814039 minimal NA NA AUUUA UAUU minimal chr8 - 136786018 136786043 repeat LINE-L1MA5 RepeatMasker G16115.1 TGGGGGGCCCAAGTCCTTCTGATCG 71 3 3 368 0.035294118 -0.698970004 0.788235294 0.347826087 0.823529412 15 68 14 3 chr8:136786018-136786043 NA NA NA NA NA NA chr9 + 4663830 4663858 3'utr PPAPDC2 Ensembl G16139.1 CTTTTTTACTTTATTATCTCTATAATTT 8 3 6 104 0.666666667 0.477121255 0 0.142857143 0.333333333 6 2 1 6 chr9:4663830-4663858 minimal NA NA NA UAUU minimal chr1 - 180416581 180416604 intron ACBD6 Ensembl G1615.1 TAATATAATATTTATTCTTAAAT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr1:180416581-180416604 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 + 6507021 6507044 3'utr UHRF2 Ensembl G16151.1 TATACCTTAATAAATATTTTATG 9 5 9 88 1 0.954242509 0.777777778 0.5 0.666666667 3 0 0 9 chr9:6507021-6507044 minimal NA NA NA UAUU minimal chr1 - 182181590 182181621 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G1616.1 GATTCCCACTGTCCCTACCTACTATCCAGTT 46 2 45 414 0.918367347 1.051152522 0.93877551 0.333333333 0.918367347 4 1 3 45 chr1:182181590-182181621 NA NA NA NA NA NA chr9 + 19050648 19050675 3'utr RRAGA Ensembl G16167.1 CATCCTTTATTTTTAATATTCATAATG 28 10 26 322 0.866666667 0.937852093 0.133333333 0.571428571 0.8 6 2 2 26 chr9:19050648-19050675 minimal NA NA NA UAUU minimal chr9 + 26984139 26984160 intron IFT74 Ensembl G16182.1 AATTTCACAAAACTATTTATA 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr9:26984139-26984160 minimal NA NA AUUUA UAUU minimal chr1 - 183596179 183596202 3'utr ARPC5 Ensembl G1619.1 ACCATATTTCCCTTATTTAATAA 14 4 12 125 0.857142857 1.079181246 0 0.5 0.785714286 3 2 0 12 chr1:183596179-183596202 minimal NA NA AUUUA UAUU minimal chr9 + 34200697 34200722 intron UBAP1 Ensembl G16193.1 CATTACCAATACATTACTATTTATT 4 2 2 37 0.5 0.301029996 0 0 0 4 2 0 2 chr9:34200697-34200722 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 183596309 183596330 3'utr ARPC5 Ensembl G1620.1 TATTATTTTTAACTAATACTG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:183596309-183596330 minimal NA NA NA UAUU minimal chr9 + 37088140 37088160 lincRNA RP11-220I1.1 Ensembl G16203.1 CCAAATCATCAAACATTTAT 3 2 2 16 0.666666667 0.301029996 0 0 0 3 1 0 2 chr9:37088140-37088160 minimal NA NA AUUUA NA minimal chr9 + 37089086 37089107 lincRNA RP11-220I1.1 Ensembl G16204.1 ATTCCCTTTCTTTTATTATCC 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:37089086-37089107 minimal NA NA NA UAUU minimal chr9 + 37089338 37089360 lincRNA RP11-220I1.1 Ensembl G16205.1 TTGTAGAAGTAATTACTAACTT 3 2 3 18 1 0.477121255 0 0 0 3 0 0 3 chr9:37089338-37089360 NA NA NA NA NA NA chr1 - 185266620 185266643 3'utr IVNS1ABP Ensembl G1622.1 CCTTTTTATAACTTTTTATATTC 3 2 3 38 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:185266620-185266643 minimal NA NA NA UAUU minimal chr9 + 72967222 72967242 coding SMC5 Ensembl G16227.1 TATTACATTCACTCAACCTT 3 2 2 22 1 0.477121255 0 0 0 3 0 0 3 chr9:72967222-72967242 NA NA NA NA UAUU minimal chr1 - 185266647 185266671 3'utr IVNS1ABP Ensembl G1623.1 CCTACCAATATTTAATCTTTTATG 11 4 11 102 0.916666667 0.740362689 0 0.666666667 0.833333333 2 0 1 11 chr1:185266647-185266671 minimal NA NA AUUUA UAUU minimal chr9 + 79186654 79186707 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G16233.1 GCATCGCCGCGGAGCCTCGGTTGGCCTCGGATAGCCGGTCCCCCGCCTGTCCC 10435 9 382 52713 0.030467379 -0.740982373 0.787924709 0.502487562 0.976072739 300 10053 2103 382 chr9:79186654-79186707 NA NA NA NA NA NA chr9 + 79186835 79186873 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G16235.1 AACCTGGCGCTAAACCATTCGTAGACGACCTGCTTCTG 330 6 10 2295 0.026666667 -0.662757832 0.616 0.378947368 0.842666667 59 320 45 10 chr9:79186835-79186873 NA NA NA NA NA NA chr9 + 80031164 80031188 3'utr VPS13A Ensembl G16240.1 CATCTATTTATAATTCTAATTATT 13 4 8 157 0.571428571 0.602059991 0 0.3 0.5 7 5 1 8 chr9:80031164-80031188 minimal NA NA AUUUA UAUU minimal chr9 + 81002986 81003007 repeat LTR-ERVL-B4-int RepeatMasker G16244.1 CATAAATAATTTCTAATTTAT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr9:81002986-81003007 minimal NA NA AUUUA NA minimal chr9 + 81349924 81349945 NoAnnotation G16248.1 CCATCCTAATTATTATTTATT 3 2 3 30 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr9:81349924-81349945 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 86618121 86618141 3'utr RMI1 Ensembl G16253.1 CTAATTTATAATTACTATTA 4 3 4 36 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr9:86618121-86618141 minimal NA NA AUUUA UAUU minimal chr9 + 88403614 88403643 repeat Simple_repeat-(TTATA)n RepeatMasker G16258.1 TATACATTATACATTATTTCACTTTATAT 3 3 3 34 0.75 0.176091259 0 0 0 4 0 1 3 chr9:88403614-88403643 minimal NA NA NA UAUU minimal chr9 + 91090584 91090606 repeat Simple_repeat-(TA)n RepeatMasker G16266.1 TATCTACCTATATCTATATGTG 6 3 5 53 0.833333333 0.698970004 0.333333333 0.2 0.333333333 4 1 0 5 chr9:91090584-91090606 NA NA NA NA NA NA chr9 + 91093439 91093465 repeat Low_complexity-AT_rich RepeatMasker G16267.1 AATTCATTTTTAATTTTAATTTTATT 10 3 9 143 0.818181818 0.653212514 0 0.428571429 0.636363636 4 1 1 9 chr9:91093439-91093465 minimal NA NA NA UAUU minimal chr9 + 91093560 91093587 3'utr SPIN1 Ensembl G16268.1 TAACTCTATCTTATCCTTAAAACATTT 6 2 4 58 0.363636364 -0.176091259 0 0.285714286 0.545454545 5 2 5 4 chr9:91093560-91093587 minimal NA NA NA NA NA chr9 + 91931100 91931125 intron CKS2 Ensembl G16270.1 TAATCTTTTTACTTTTAATCTATTT 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:91931100-91931125 NA NA NA NA UAUU minimal chr9 + 96293575 96293596 3'utr FAM120A Ensembl G16273.1 CAAATATTACAAAATTATTAT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr9:96293575-96293596 minimal NA NA NA UAUU minimal chr9 + 98736398 98736424 intron C9orf102 Ensembl G16283.1 ATACTTAATACCTATACTTATTTATT 4 2 3 46 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr9:98736398-98736424 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 100618172 100618192 3'utr FOXE1 Ensembl G16286.1 CAATTATATCATAACTTATT 7 4 4 59 0.571428571 0.602059991 0 0.2 0.428571429 4 3 0 4 chr9:100618172-100618192 minimal NA NA NA UAUU minimal chr9 + 100778111 100778144 repeat Low_complexity-AT_rich RepeatMasker G16287.1 CTTTGCTTTTTAATTATTATTATTATTTTTTTT 4 3 4 77 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:100778111-100778144 minimal NA NA NA UAUU minimal chr9 + 100829854 100829875 intron NANS Ensembl G16288.1 ATTATTTTTCTTTATATATTC 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:100829854-100829875 minimal NA NA NA UAUU minimal chr9 + 102717745 102717767 intron STX17 Ensembl G16295.1 TAAATTAATTTCACTATTTTTA 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:102717745-102717767 NA NA NA NA UAUU minimal chr9 + 103339853 103339877 repeat Low_complexity-AT_rich RepeatMasker G16298.1 TTAAAAATTATTAATTTTAATATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr9:103339853-103339877 minimal NA NA NA UAUU minimal chr9 + 108401012 108401046 3'utr FKTN Ensembl G16304.1 TTTTTAGTATTTAAACTACTTTTAATTATTTATA 10 5 10 132 1 1 0 0.111111111 0.2 8 0 0 10 chr9:108401012-108401046 UUAUUUAU NA NA AUUUA UAUU minimal chr9 + 108402253 108402286 3'utr FKTN Ensembl G16305.1 AAATCTGGAATACTTAATTTCATTTAATTATCT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr9:108402253-108402286 minimal NA NA AUUUA NA minimal chr1 - 192984395 192984419 NoAnnotation G1631.1 ACTTTAACATTTTATTATTTATTG 18 5 13 237 0.722222222 1.113943352 0 0.555555556 0.777777778 4 5 0 13 chr1:192984395-192984419 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 112932331 112932356 3'utr PALM2-AKAP2 Ensembl G16313.1 TCTCCTATTTATTCTCATACTTTAC 6 3 6 68 1 0.77815125 0 0 0 6 0 0 6 chr9:112932331-112932356 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 + 114308919 114308945 intron ZNF483 Ensembl G16317.1 TCATTTTATTTATTTTAGAATTATTT 3 2 3 40 1 0.477121255 0 0 0 3 0 0 3 chr9:114308919-114308945 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 115926100 115926127 3'utr SLC31A2 Ensembl G16329.1 TTCAATACTTAATATTCTCTATTTATT 4 4 4 52 1 0.602059991 0 0 0 4 0 0 4 chr9:115926100-115926127 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 192986690 192986712 intron UCHL5 Ensembl G1633.1 CTAAAACCAAATTATATTTATT 3 2 3 24 1 0.477121255 0 0 0 3 0 0 3 chr1:192986690-192986712 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 + 116659424 116659446 intron ZNF618 Ensembl G16332.1 TTTATATTTATTATCATAACTG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr9:116659424-116659446 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 + 117227121 117227157 repeat Simple_repeat-(ATG)n RepeatMasker G16334.1 TGATGATGATGATGATGATGATGATGTCGTCTGTCT 5 2 2 46 0.25 -0.301029996 0.5 0.142857143 0.25 6 3 3 2 chr9:117227121-117227157 NA NA NA NA NA NA chr9 + 117360115 117360143 3'utr ATP6V1G1 Ensembl G16335.1 CATTAAATTATTTCCATATATTATATAA 7 5 7 84 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr9:117360115-117360143 minimal NA NA NA UAUU minimal chr1 - 192996398 192996435 intron UCHL5 Ensembl G1634.1 TATATTCAATTTCAGATAATTATATATATATTCAGTT 4 2 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:192996398-192996435 minimal NA NA NA UAUU minimal chr9 + 125090900 125090923 NoAnnotation G16342.1 ACACTTAAATTCATTTACATTTA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:125090900-125090923 minimal NA NA AUUUA NA minimal chr9 + 125839207 125839228 intron RABGAP1 Ensembl G16343.1 TATTATATAACTCTTAACCTT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr9:125839207-125839228 minimal NA NA NA UAUU minimal chr9 + 127165487 127165508 NoAnnotation G16344.1 ATATAATTTTATCACTATTTT 29 4 4 324 0.137931034 0.602059991 0 0.375 0.827586207 5 25 0 4 chr9:127165487-127165508 minimal NA NA NA UAUU minimal chr9 + 127639968 127639988 repeat Low_complexity-AT_rich RepeatMasker G16345.1 CTTATTTAATTAATTTAATA 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr9:127639968-127639988 minimal NA NA AUUUA UAUU minimal chr1 - 193002659 193002681 intron UCHL5 Ensembl G1635.1 AATAATTTTTTTAACTTAATAT 3 2 2 30 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:193002659-193002681 NA NA NA NA NA NA chr9 + 128605822 128605846 intron PBX3 Ensembl G16351.1 ACATTATCTTTATCTTTATTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:128605822-128605846 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 129647070 129647093 3'utr ZBTB34 Ensembl G16360.1 TATTTTATTTTATCAACTTTTTC 6 4 6 84 1 0.77815125 0 0.25 0.5 3 0 0 6 chr9:129647070-129647093 minimal NA NA NA UAUU minimal chr9 + 129647252 129647275 repeat Low_complexity-AT_rich RepeatMasker G16361.1 TTATTTATTAAATTTTATATATG 2 2 2 25 1 0.301029996 1 0 0 2 0 0 2 chr9:129647252-129647275 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 + 130870873 130870896 3'utr SLC25A25 Ensembl G16364.1 TTCATTTTTTATTCATATTTATG 14 5 12 197 0.857142857 1.079181246 0.714285714 0.5 0.714285714 4 2 0 12 chr9:130870873-130870896 minimal NA NA AUUUA UAUU minimal chr9 + 131678995 131679022 3'utr LRRC8A Ensembl G16371.1 TATTTATTTTTCTCCATCTCCCACCTC 10 3 10 114 1 1 0 0.5 0.7 3 0 0 10 chr9:131678995-131679022 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 + 133488934 133488956 intron FUBP3 Ensembl G16374.1 AACAATTTTTTATTTTATTTAT 3 2 3 39 1 0.477121255 0.666666667 0 0 3 0 0 3 chr9:133488934-133488956 UUAUUUAU NA NA AUUUA UAUU minimal chr9 + 133513303 133513332 3'utr FUBP3 Ensembl G16376.1 CTTTTTTCTTTTAAATATTTTCTTAATAT 6 3 4 83 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr9:133513303-133513332 NA NA NA NA UAUU minimal chr9 + 134059223 134059245 intron NUP214 Ensembl G16378.1 TTATTTACACATTTTTTCATCC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr9:134059223-134059245 minimal NA NA AUUUA UAUU minimal chr9 + 134373672 134373708 3'utr PRRC2B Ensembl G16382.1 TAAATGTTTCACTGCTCTATTTATATATAATGTCTG 3 3 3 30 1 0.477121255 0.333333333 0 0 3 0 0 3 chr9:134373672-134373708 minimal NA NA AUUUA UAUU minimal chr9 + 135567088 135567108 3'utr GTF3C4 Ensembl G16384.1 CAATCTCTACCTACTATTAT 5 2 4 36 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr9:135567088-135567108 minimal NA NA NA UAUU minimal chr9 + 135567298 135567322 repeat Low_complexity-AT_rich RepeatMasker G16385.1 CAATAATTAAATATTTCAATTATT 5 4 5 47 1 0.698970004 0 0.25 0.4 3 0 0 5 chr9:135567298-135567322 minimal NA NA NA UAUU minimal chr9 + 135567742 135567768 3'utr GTF3C4 Ensembl G16386.1 TTTTCTTCAAAACTTAACTATAATTT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr9:135567742-135567768 NA NA NA NA NA NA chr9 + 135570301 135570327 3'utr GTF3C4 Ensembl G16387.1 CCACTTTTTTATTCAAAATAAATAAC 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr9:135570301-135570327 minimal NA NA NA UAUU minimal chr1 - 197086796 197086818 intron ASPM Ensembl G1640.1 ATTCTTTATCTAATACTTAATT 3 2 2 34 0.5 0 0 0 0 4 1 1 2 chr1:197086796-197086818 minimal NA NA NA NA NA chr1 - 197101372 197101395 intron ASPM Ensembl G1642.1 TTCTAAAATAATATTTTTTTATT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:197101372-197101395 minimal NA NA NA UAUU minimal chr9 - 6011398 6011419 3'utr RANBP6 Ensembl G16420.1 ATTTCTATTTCAAATAATTTC 6 2 4 62 0.666666667 0.602059991 0 0.25 0.5 3 2 0 4 chr9:6011398-6011419 NA NA NA NA UAUU minimal chr9 - 9795646 9795667 intron PTPRD Ensembl G16426.1 TCAAATCTATTTTATTTTATT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:9795646-9795667 minimal NA NA NA UAUU minimal chr9 - 11022006 11022031 NoAnnotation G16434.1 TCATTATATATTAAAAATATTTATT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr9:11022006-11022031 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 - 13106267 13106290 3'utr MPDZ Ensembl G16438.1 CACATTTCAATTTTCATTCTTAT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:13106267-13106290 minimal NA NA NA NA NA chr1 - 197125647 197125672 NoAnnotation G1644.1 CTCTATAACTCTAATCCATTTATTT 8 2 8 79 1 0.903089987 0 0.666666667 0.875 1 0 0 8 chr1:197125647-197125672 minimal NA NA AUUUA UAUU minimal chr9 - 14083117 14083138 3'utr NFIB Ensembl G16443.1 CAATTTTTTCTTCAATGGTTG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:14083117-14083138 NA NA NA NA NA NA chr9 - 14084247 14084270 3'utr NFIB Ensembl G16444.1 CTAACTTTTTAACAATTATAATG 5 3 5 44 1 0.698970004 0 0.25 0.4 3 0 0 5 chr9:14084247-14084270 minimal NA NA NA NA NA chr9 - 14086497 14086520 3'utr NFIB Ensembl G16445.1 TTTTTCATCTTCCAATTAATATT 6 3 4 68 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr9:14086497-14086520 NA NA NA NA UAUU minimal chr9 - 14086714 14086734 3'utr NFIB Ensembl G16446.1 TTTATTATCATTTTAAATCT 4 2 4 44 1 0.602059991 0 0.5 0.75 1 0 0 4 chr9:14086714-14086734 minimal NA NA NA UAUU minimal chr9 - 14087461 14087483 3'utr NFIB Ensembl G16448.1 TAAAAATTAATATAATATTTTC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:14087461-14087483 NA NA NA NA UAUU minimal chr9 - 14617988 14618010 3'utr ZDHHC21 Ensembl G16452.1 ATACTTTTTACTTTTATTTATG 5 4 5 65 1 0.698970004 0 0.25 0.4 3 0 0 5 chr9:14617988-14618010 UUAUUUAU NA NA AUUUA UAUU minimal chr9 - 15478275 15478296 intron PSIP1 Ensembl G16454.1 CTATTTATCATTTCATTAATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr9:15478275-15478296 minimal NA NA AUUUA UAUU minimal chr9 - 15489936 15489959 intron PSIP1 Ensembl G16455.1 ATATTACTTATTTAATCCTGGGG 4 2 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:15489936-15489959 minimal NA NA AUUUA UAUU minimal chr9 - 21331205 21331239 3'utr KLHL9 Ensembl G16468.1 AAAAGTAGAAAAATTAGAAATTATTAACTTTATT 6 2 6 39 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr9:21331205-21331239 minimal NA NA NA UAUU minimal chr9 - 21334501 21334521 coding KLHL9 Ensembl G16469.1 CAAAACTTTCTCTTAATATG 4 2 4 28 1 0.602059991 0 0.5 0.75 1 0 0 4 chr9:21334501-21334521 NA NA NA NA NA NA chr9 - 21968013 21968048 3'utr CDKN2A Ensembl G16471.1 TAAATGTCCATTTATATCATTTTTTATATATTCTT 83 11 74 1120 0.850574713 1.170261715 0 0.301886792 0.574712644 37 9 4 74 chr9:21968013-21968048 minimal NA NA AUUUA UAUU minimal chr9 - 21992284 21992312 intron CDKN2A Ensembl G16473.1 TAATTATATATTTCACATTAATATATTT 8 5 8 93 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr9:21992284-21992312 minimal NA NA NA UAUU minimal chr9 - 22004883 22004906 3'utr CDKN2B Ensembl G16475.1 CTTTCTTCTTAACCTATTTATTT 9 4 8 112 0.888888889 0.903089987 0 0.333333333 0.555555556 4 1 0 8 chr9:22004883-22004906 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 197477774 197477796 NoAnnotation G1648.1 ACTATATTCTAAATATTTATTG 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:197477774-197477796 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 - 26841836 26841859 3'utr C9orf82 Ensembl G16480.1 CACTTTTTAAATATATACTATTT 4 4 4 41 1 0.602059991 0 0 0 4 0 0 4 chr9:26841836-26841859 NA NA NA NA UAUU minimal chr9 - 32540860 32540882 3'utr TOPORS Ensembl G16487.1 CCAAAATAAAAATTTACTATTT 3 3 3 19 1 0.477121255 0 0 0 3 0 0 3 chr9:32540860-32540882 minimal NA NA AUUUA UAUU minimal chr9 - 32553809 32553832 3'utr NDUFB6 Ensembl G16489.1 TTCCTATATTACCATATTTACTG 5 3 5 46 1 0.698970004 0 0 0 5 0 0 5 chr9:32553809-32553832 minimal NA NA AUUUA UAUU minimal chr1 - 197479481 197479509 3'utr DENND1B Ensembl G1649.1 CAACTCATACTATTTAAATTTTTTTTTG 6 3 3 75 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr1:197479481-197479509 minimal NA NA AUUUA UAUU minimal chr9 - 32973003 32973032 3'utr APTX Ensembl G16492.1 TAATATTCTTTTCCCTTCCTTCATGGGGA 4 3 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:32973003-32973032 NA NA NA NA UAUU minimal chr9 - 32973358 32973385 3'utr APTX Ensembl G16493.1 CTTTTTCACAAATTTATTCTATTATTG 13 4 13 153 1 1.113943352 0 0.222222222 0.461538462 7 0 0 13 chr9:32973358-32973385 minimal NA NA AUUUA UAUU minimal chr9 - 32982604 32982624 intron APTX Ensembl G16495.1 TATTTATATACCCTTTTATA 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:32982604-32982624 minimal NA NA AUUUA UAUU minimal chr9 - 32983711 32983739 intron APTX Ensembl G16496.1 CTTATTTTACTTATTTACTTACTTATTT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr9:32983711-32983739 minimal NA NA AUUUA UAUU minimal chr9 - 33047108 33047146 3'utr SMU1 Ensembl G16497.1 TTTAAGTAGCAACTACCCTTTCTTTTTTTATATATTTT 8 4 6 102 0.666666667 0.477121255 0 0 0 9 2 1 6 chr9:33047108-33047146 minimal NA NA NA UAUU minimal chr9 - 33070931 33070959 intron SMU1 Ensembl G16499.1 CTATCAAATACTATTTCTTATTTATTCT 7 5 5 93 0.714285714 0.698970004 0 0 0 7 2 0 5 chr9:33070931-33070959 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 - 34086599 34086622 3'utr DCAF12 Ensembl G16504.1 TCTTAATTTTTTTTCTATTATTA 12 4 8 180 0.666666667 0.903089987 0 0.25 0.5 6 4 0 8 chr9:34086599-34086622 minimal NA NA NA UAUU minimal chr9 - 35736970 35736992 3'utr GBA2 Ensembl G16515.1 AATCACTTATTTATTTCTTTCC 5 2 4 53 1 0.698970004 0 0.25 0.4 3 0 0 5 chr9:35736970-35736992 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 - 37773978 37774002 intron EXOSC3 Ensembl G16519.1 ACTAATAAACTTTTAATTATTATT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:37773978-37774002 minimal NA NA NA UAUU minimal chr9 - 72333100 72333123 3'utr PTAR1 Ensembl G16526.1 TAAATCTTTCATTTTATTTATTT 3 2 2 42 0.666666667 0.301029996 0 0 0 3 1 0 2 chr9:72333100-72333123 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 - 74300051 74300072 3'utr TMEM2 Ensembl G16532.1 AACTAACTTATTTAATTTATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr9:74300051-74300072 minimal NA NA AUUUA UAUU minimal chr9 - 74480379 74480405 3'utr FAM108B1 Ensembl G16533.1 TTTAATTCATAACTTTTATATTAACC 4 2 4 42 1 0.602059991 0 0.5 0.75 1 0 0 4 chr9:74480379-74480405 minimal NA NA NA UAUU minimal chr9 - 77562092 77562115 3'utr C9orf40 Ensembl G16539.1 ATATAACTATTTTTTTAAACACC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:77562092-77562115 NA NA NA NA UAUU minimal chr9 - 77562207 77562231 3'utr C9orf40 Ensembl G16540.1 TTTTATTCCTTATTACTTTAGACC 8 2 8 94 1 0.903089987 0 0.75 0.875 1 0 0 8 chr9:77562207-77562231 minimal NA NA NA UAUU minimal chr9 - 77562536 77562558 3'utr C9orf40 Ensembl G16541.1 TACTTTCTAATACATTCTATTG 8 4 8 78 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr9:77562536-77562558 NA NA NA NA UAUU minimal chr9 - 79000526 79000551 3'utr RFK Ensembl G16544.1 TCTATATCTTTCAAAAACTTTTATA 4 2 3 43 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr9:79000526-79000551 minimal NA NA NA NA NA chr1 - 200374156 200374176 NoAnnotation G1655.1 AATTTCTTTAACTTTTATTG 7 4 6 78 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr1:200374156-200374176 minimal NA NA NA UAUU minimal chr9 - 86553339 86553363 3'utr C9orf64 Ensembl G16553.1 CACTTTATTTTAAACTTTTTATTG 4 3 3 51 0.6 0.176091259 0 0 0 5 1 1 3 chr9:86553339-86553363 minimal NA NA NA UAUU minimal chr9 - 86553527 86553551 3'utr C9orf64 Ensembl G16554.1 AACTTTAATATTTTATTTAAATTT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr9:86553527-86553551 minimal NA NA AUUUA UAUU minimal chr9 - 88159197 88159218 NoAnnotation G16558.1 ACTCAAATATTTCCATTTATT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr9:88159197-88159218 minimal NA NA AUUUA UAUU minimal chr9 - 88202407 88202443 intron AGTPBP1 Ensembl G16562.1 ACCAGTTAGAATTCTATTTATATTTATCATCACTTT 6 2 6 61 1 0.77815125 0 0.25 0.5 3 0 0 6 chr9:88202407-88202443 minimal NA NA AUUUA UAUU minimal chr9 - 89559595 89559620 3'utr GAS1 Ensembl G16570.1 TTTAAACTCACATCCATATTACACC 8 5 7 48 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr9:89559595-89559620 NA NA NA NA UAUU minimal chr1 - 200376003 200376027 3'utr ZNF281 Ensembl G1658.1 CAACTTTTCATATTTAGTTTATTT 6 3 5 68 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:200376003-200376027 minimal NA NA AUUUA UAUU minimal chr9 - 95014224 95014248 intron IARS Ensembl G16580.1 CCTCTTTTTAATAAACTTATTTTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr9:95014224-95014248 minimal NA NA NA UAUU minimal chr9 - 95597184 95597208 NoAnnotation G16587.1 TTACCTAAATATAATTATTTAACT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:95597184-95597208 minimal NA NA AUUUA UAUU minimal chr9 - 95607258 95607283 NoAnnotation G16590.1 TTATAACATTATAATTTCATTTATT 5 3 4 63 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr9:95607258-95607283 minimal NA NA AUUUA UAUU minimal chr9 - 99148457 99148478 3'utr ZNF367 Ensembl G16599.1 AAATTATCACAACTATTTAGA 5 2 5 30 1 0.698970004 0 0.5 0.8 1 0 0 5 chr9:99148457-99148478 minimal NA NA AUUUA UAUU minimal chr1 - 200521716 200521741 3'utr KIF14 Ensembl G1660.1 CTACCTAAATATAGTATAATTATAT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:200521716-200521741 minimal NA NA NA NA NA chr9 - 99148498 99148523 3'utr ZNF367 Ensembl G16600.1 TTTTTTCATAAACATTTTTTATTTG 3 2 2 41 0.666666667 0.301029996 0 0 0 3 1 0 2 chr9:99148498-99148523 minimal NA NA NA UAUU minimal chr9 - 99150100 99150128 3'utr ZNF367 Ensembl G16601.1 ATCATTTTTAACAATATATATTAGTATG 8 3 8 85 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr9:99150100-99150128 NA NA NA NA UAUU minimal chr9 - 99403752 99403783 repeat LINE-L1ME4a RepeatMasker G16605.1 CTATAAAATCATAAATACTCTAAATTATTTT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr9:99403752-99403783 minimal NA NA NA UAUU minimal chr9 - 100665904 100665924 NoAnnotation G16609.1 AATTATACATGGATCCTCTG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:100665904-100665924 minimal NA NA NA NA NA chr1 - 200522369 200522395 3'utr KIF14 Ensembl G1661.1 TCTTTTTATCTTTAAAATATCTATTT 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr1:200522369-200522395 minimal NA NA NA UAUU minimal chr9 - 104152338 104152366 3'utr MRPL50 Ensembl G16619.1 CATACACAAATAAACTTTTATTAGATAG 3 2 3 20 1 0.477121255 0 0 0 3 0 0 3 chr9:104152338-104152366 minimal NA NA NA UAUU minimal chr9 - 104238091 104238120 3'utr C9orf125 Ensembl G16620.1 ATTCAAATATTTATCTCTTTATTTAGACA 17 5 16 216 0.941176471 1.204119983 0 0.333333333 0.529411765 8 1 0 16 chr9:104238091-104238120 minimal NA NA AUUUA UAUU minimal chr9 - 111777796 111777820 3'utr C9orf5 Ensembl G16628.1 CTTATTATCAAATATCATTTATTT 5 4 5 55 1 0.698970004 0 0 0 5 0 0 5 chr9:111777796-111777820 minimal NA NA AUUUA UAUU minimal chr9 - 111782408 111782429 3'utr C9orf5 Ensembl G16631.1 TTACTATATTATATATTTATA 7 4 6 78 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr9:111782408-111782429 minimal NA NA AUUUA UAUU minimal chr9 - 114985079 114985102 3'utr ROD1 Ensembl G16641.1 TATTTACTTAATTTCTTATTATG 10 2 8 123 0.8 0.903089987 0 0.666666667 0.9 1 2 0 8 chr9:114985079-114985102 minimal NA NA AUUUA UAUU minimal chr9 - 123521574 123521597 repeat DNA-MamRep434 RepeatMasker G16651.1 TTAACTATAAATCATTTATATCT 5 3 5 47 1 0.698970004 0 0.25 0.4 3 0 0 5 chr9:123521574-123521597 minimal NA NA AUUUA NA minimal chr1 - 202103200 202103228 3'utr ARL8A Ensembl G1666.1 TATATATATTTTAATTTTTTAATTTAAG 6 4 6 90 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:202103200-202103228 minimal NA NA AUUUA UAUU minimal chr9 - 125003833 125003856 3'utr RBM18 Ensembl G16662.1 CAAATACACAAAATATTATTTAA 2 2 2 11 1 0.301029996 0 0 0 2 0 0 2 chr9:125003833-125003856 minimal NA NA AUUUA UAUU minimal chr9 - 125581033 125581055 3'utr PDCL Ensembl G16664.1 TATTTATAATAATTATCATTTG 5 3 5 53 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr9:125581033-125581055 minimal NA NA AUUUA UAUU minimal chr9 - 125581288 125581319 3'utr PDCL Ensembl G16665.1 ACCTTTTTTTATATTATTAAATATTCTACAA 3 3 3 42 1 0.477121255 0 0 0 3 0 0 3 chr9:125581288-125581319 minimal NA NA NA UAUU minimal chr9 - 125607212 125607235 3'utr RC3H2 Ensembl G16666.1 CTTCTATTTAAAACTATAATTTA 7 2 5 54 0.714285714 0.698970004 0 0.2 0.428571429 4 2 0 5 chr9:125607212-125607235 minimal NA NA AUUUA UAUU minimal chr9 - 125609527 125609552 3'utr RC3H2 Ensembl G16667.1 TATTTAACCTTATCTTTTTAATTTT 5 4 4 67 0.8 0.602059991 0 0 0 5 1 0 4 chr9:125609527-125609552 minimal NA NA AUUUA UAUU minimal chr9 - 125610123 125610144 3'utr RC3H2 Ensembl G16668.1 ATCTTACACATTTATTTAATA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:125610123-125610144 minimal NA NA AUUUA UAUU minimal chr9 - 125611472 125611514 3'utr RC3H2 Ensembl G16671.1 AAAGTAGACTTAGTTAACTTATTTATTTCTATTTTATGTTTC 58 15 53 702 0.913793103 1.72427587 0 0.236842105 0.5 29 5 0 53 chr9:125611472-125611514 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 - 125670532 125670556 3'utr ZBTB6 Ensembl G16674.1 AATTTATTCATTTAACATATTCAC 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr9:125670532-125670556 minimal NA NA AUUUA UAUU minimal chr9 - 125670675 125670699 3'utr ZBTB6 Ensembl G16675.1 TTATTATTTATATTATTTATTCCT 21 6 16 302 0.761904762 1.204119983 0 0.727272727 0.857142857 3 5 0 16 chr9:125670675-125670699 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr9 - 125671528 125671551 3'utr ZBTB6 Ensembl G16677.1 AATTTCTACTGTATTTAATTTCT 4 4 4 36 1 0.602059991 0 0 0 4 0 0 4 chr9:125671528-125671551 minimal NA NA AUUUA UAUU minimal chr9 - 125672263 125672291 3'utr ZBTB6 Ensembl G16679.1 TTCCTCTCTATTTTATTTTTTATTTAAC 12 8 11 195 0.846153846 0.740362689 0 0.181818182 0.307692308 9 1 1 11 chr9:125672263-125672291 minimal NA NA AUUUA UAUU minimal chr9 - 125672393 125672414 3'utr ZBTB6 Ensembl G16680.1 ATTTTATTTAATACAATCGGA 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:125672393-125672414 minimal NA NA AUUUA UAUU minimal chr9 - 126593494 126593522 intron DENND1A Ensembl G16682.1 CTTATTTTCATTATATTTATTTCTGGGT 3 3 3 43 1 0.477121255 0 0 0 3 0 0 3 chr9:126593494-126593522 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 - 127176187 127176219 coding PSMB7 Ensembl G16683.1 TTCAAAAATACACTTCATATCTCCTAATATTT 6 3 3 64 0.375 0 0 0 0 8 3 2 3 chr9:127176187-127176219 NA NA NA NA UAUU minimal chr9 - 127284799 127284832 3'utr NR6A1 Ensembl G16684.1 TTTTTTTAACCTCATTTTTCTATATATTTATTT 2 2 2 37 1 0.301029996 0 0 0 2 0 0 2 chr9:127284799-127284832 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr9 - 127911807 127911834 3'utr PPP6C Ensembl G16688.1 CCTTTTTTTTTTTAAATTTTAAATTAT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr9:127911807-127911834 minimal NA NA NA NA NA chr9 - 127911865 127911893 3'utr PPP6C Ensembl G16689.1 TATTACCCTCTACAATATACTTTTTATT 6 3 3 65 0.428571429 0.176091259 0 0.166666667 0.285714286 5 3 1 3 chr9:127911865-127911893 minimal NA NA NA UAUU minimal chr9 - 130500604 130500630 3'utr SH2D3C Ensembl G16691.1 ATTTCTTTCATATAATAAACTTTTAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr9:130500604-130500630 minimal NA NA NA NA NA chr9 - 132396899 132396927 NoAnnotation G16696.1 CTTAAACTATTCATCTTATTAAAAATAA 7 4 7 64 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr9:132396899-132396927 minimal NA NA NA UAUU minimal chr9 - 132399161 132399186 3'utr ASB6 Ensembl G16698.1 ACTTTCTTGGCCTTAACAAGGTCCT 4 2 4 29 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:132399161-132399186 NA NA NA NA NA NA chr9 - 132575353 132575383 3'utr TOR1A Ensembl G16699.1 CCATATTAAATCTTCCTCATTTATACTATT 9 5 8 92 0.888888889 0.903089987 0 0 0 9 1 0 8 chr9:132575353-132575383 minimal NA NA AUUUA UAUU minimal chr9 - 132589591 132589612 3'utr C9orf78 Ensembl G16700.1 TTTCTTATTACTATTAGAATT 4 2 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr9:132589591-132589612 minimal NA NA NA UAUU minimal chr9 - 135225977 135226000 intron SETX Ensembl G16705.1 CATTTCTAAATAATTATTTAATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr9:135225977-135226000 minimal NA NA AUUUA UAUU minimal chr9 - 135469747 135469774 3'utr DDX31 Ensembl G16706.1 AATATATTTATCACTAATTATTTTCTT 4 3 4 45 1 0.602059991 0 0 0 4 0 0 4 chr9:135469747-135469774 minimal NA NA AUUUA UAUU minimal chr9 - 136196497 136196521 repeat LTR-LTR13 RepeatMasker G16710.1 CAATTACCTTTTATTCCAATATTA 22 4 16 217 0.695652174 0.903089987 0 0.307692308 0.608695652 9 6 1 16 chr9:136196497-136196521 minimal NA NA NA UAUU minimal chr9 - 136897493 136897515 NoAnnotation G16712.1 CACATTCTAATTTTTTATTTTG 7 4 7 60 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr9:136897493-136897515 minimal NA NA NA UAUU minimal chr9 - 139323100 139323131 3'utr INPP5E Ensembl G16717.1 TCTTTTAAATTATTTTTCCATATTTATATTT 29 9 27 443 0.9 1.130333768 0 0.25 0.4 18 2 1 27 chr9:139323100-139323131 minimal NA NA AUUUA UAUU minimal chr9 - 140194263 140194290 3'utr NRARP Ensembl G16723.1 CAAATACCTTTTTAATTATGTTAATTA 8 2 8 76 1 0.903089987 0 0.666666667 0.875 1 0 0 8 chr9:140194263-140194290 minimal NA NA NA NA NA chr9 - 140194817 140194840 3'utr NRARP Ensembl G16724.1 TACCCATATTTATATTTTTATAA 8 3 7 85 0.875 0.84509804 0 0.333333333 0.5 4 1 0 7 chr9:140194817-140194840 minimal NA NA AUUUA UAUU minimal chrM + 588 613 Mt tRNA J01415.2 Ensembl G16727.1 CTTACCTCCTCAAAGCAATACACTG 27 2 2 149 0.058823529 -0.602059991 0.5 0.466666667 0.764705882 8 25 7 2 chrM:588-613 NA NA NA NA NA NA chr1 - 204366634 204366664 NoAnnotation G1673.1 CAATTTCCTTTTTCTATTTATTTATTTATT 7 6 6 112 0.857142857 0.77815125 0 0 0 7 1 0 6 chr1:204366634-204366664 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrM + 1403 1447 piRNA chrM-FR023255-38771 ncRNA.org G16733.1 AAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTGAGAGTAG 101 3 4 581 0.032520325 -0.759667845 0.739837398 0.409090909 0.788617886 26 97 22 4 chrM:1403-1447 minimal NA NA AUUUA NA minimal chrM + 1505 1540 Mt rRNA J01415.24 Ensembl G16734.1 TATACTTCAAAGGACATTTAACTAAAACCCCTACG 23 3 4 141 0.173913043 0.602059991 0.565217391 0.555555556 0.826086957 4 19 0 4 chrM:1505-1540 minimal NA NA AUUUA NA minimal chr1 - 204372706 204372730 3'utr PPP1R15B Ensembl G1675.1 TAACACTTCTTCATCTTTAACTTG 7 5 7 67 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr1:204372706-204372730 NA NA NA NA NA NA chrM + 3084 3112 Mt rRNA J01415.4 Ensembl G16751.1 TAATCCAGGTCGGTTTCTATCTACTTCA 130 5 6 1006 0.042857143 -0.263241435 0.871428571 0.225806452 0.828571429 24 124 10 6 chrM:3084-3112 NA NA NA NA NA NA chrM + 3644 3669 coding MT-ND1 Ensembl G16755.1 TTTACTCAATCCTCTGATCAGGGTG 6 2 2 49 0.333333333 0.301029996 1 0 0 6 4 0 2 chrM:3644-3669 NA NA NA NA NA NA chrM + 6212 6232 coding MT-CO1 Ensembl G16761.1 ACTCTTACCTCCCTCTCTCC 4 2 2 25 0.5 0.301029996 0.5 0 0 4 2 0 2 chrM:6212-6232 NA NA NA NA NA NA chr1 - 204373742 204373762 3'utr PPP1R15B Ensembl G1677.1 TCATTATTTTATTTCTATCC 5 3 3 57 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr1:204373742-204373762 minimal NA NA NA UAUU minimal chrM + 10099 10127 coding MT-ND3 Ensembl G16771.1 CCTTACTACTAATAATTATTACATTTTG 21 9 19 206 0.904761905 1.278753601 0.333333333 0.333333333 0.523809524 10 2 0 19 chrM:10099-10127 minimal NA NA NA UAUU minimal chrM + 10234 10254 coding MT-ND3 Ensembl G16773.1 CTATTACCTTCTTATTATTT 16 6 14 178 0.875 1.146128036 0.3125 0.555555556 0.75 4 2 0 14 chrM:10234-10254 minimal NA NA NA UAUU minimal chr1 - 204374359 204374386 3'utr PPP1R15B Ensembl G1678.1 TAATAATTACATCATAATCATTTATTT 9 6 9 83 1 0.954242509 0 0.142857143 0.333333333 6 0 0 9 chr1:204374359-204374386 minimal NA NA AUUUA UAUU minimal chrM + 11800 11826 coding MT-ND4 Ensembl G16787.1 ACTTCAAACTCTACTCCCACTAATAG 17 2 4 114 0.235294118 0.602059991 0.823529412 0.6 0.882352941 2 13 0 4 chrM:11800-11826 NA NA NA NA NA NA chr1 - 204374486 204374525 3'utr PPP1R15B Ensembl G1679.1 CATCTTTCTACCACATTTTAACATCTAATATATTTAATT 14 7 10 137 0.714285714 1 0 0.272727273 0.428571429 8 4 0 10 chr1:204374486-204374525 minimal NA NA AUUUA UAUU minimal chrM + 15624 15651 coding MT-CYB Ensembl G16799.1 CCCTATTACTATCCATCCTCATCCTAG 11 2 2 94 0.181818182 0.301029996 0.636363636 0.333333333 0.636363636 4 9 0 2 chrM:15624-15651 NA NA NA NA UAUU minimal chr1 - 204374563 204374586 3'utr PPP1R15B Ensembl G1680.1 ATATTTCCAAGGACTGCCACAAA 4 3 4 14 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:204374563-204374586 NA NA NA NA UAUU minimal chr1 - 204374597 204374632 3'utr PPP1R15B Ensembl G1681.1 AAAATATGTGGTAGCCTTTTTATTTCTACATTAAG 6 4 6 58 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:204374597-204374632 minimal NA NA NA UAUU minimal chrX + 11141005 11141031 3'utr HCCS Ensembl G16812.1 TCTATACTATTAAATCCTTTAATTTA 8 4 8 86 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chrX:11141005-11141031 minimal NA NA AUUUA UAUU minimal chr1 - 204374743 204374766 3'utr PPP1R15B Ensembl G1682.1 TTTTTCTATATTTTTTTTATTTC 15 6 11 250 0.733333333 1.041392685 0 0.4 0.6 6 4 0 11 chr1:204374743-204374766 minimal NA NA NA UAUU minimal chrX + 17763102 17763126 intron SCML1 Ensembl G16821.1 CTATTTACTCCTTACTTATTTATA 6 4 5 73 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chrX:17763102-17763126 UUAUUUAU NA NA AUUUA UAUU minimal chrX + 17771744 17771768 3'utr SCML1 Ensembl G16823.1 TCTTTAAAAATTACTTTTATTATA 5 4 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chrX:17771744-17771768 minimal NA NA NA UAUU minimal chrX + 17772013 17772037 3'utr SCML1 Ensembl G16825.1 CCATATAAATTATTTTCCTTTCTG 23 4 20 246 0.8 0.823908741 0.08 0.5 0.76 6 3 2 20 chrX:17772013-17772037 minimal NA NA NA UAUU minimal chrX + 17772202 17772227 3'utr SCML1 Ensembl G16826.1 ACTACTTTTTTTCAAACAAACTATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chrX:17772202-17772227 NA NA NA NA UAUU minimal chrX + 18647400 18647424 intron CDKL5 Ensembl G16829.1 TAACATTTATTTATAATTAATATT 3 2 3 34 1 0.477121255 0.333333333 0 0 3 0 0 3 chrX:18647400-18647424 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 204374837 204374890 3'utr PPP1R15B Ensembl G1683.1 AAAACAATATTTATAGGGCTTAAAGCCCATTTTCATTTCTAATCTAAATTATG 27 10 24 290 0.888888889 1.380211242 0 0.173913043 0.296296296 19 3 0 24 chr1:204374837-204374890 minimal NA NA AUUUA UAUU minimal chrX + 23095262 23095287 NoAnnotation G16837.1 ATACTTTATTTTCTTTTATATTTCT 7 4 7 106 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chrX:23095262-23095287 minimal NA NA NA UAUU minimal chrX + 23803977 23804034 3'utr SAT1 Ensembl G16838.1 TGCTGCTGTAGATGACAACCTCCATTCTATTTTAGAATAAATTCCCAACTTCTCTTG 10 5 9 65 1 1 0.4 0.25 0.4 6 0 0 10 chrX:23803977-23804034 NA NA NA NA UAUU minimal chr1 - 204374891 204374914 3'utr PPP1R15B Ensembl G1684.1 CACTTTCAAAACTTATTTTCTTG 10 7 10 91 1 1 0 0.25 0.4 6 0 0 10 chr1:204374891-204374914 minimal NA NA NA UAUU minimal chrX + 23804295 23804319 3'utr SAT1 Ensembl G16840.1 ATTCTTTTTTAATAAACTACTCTT 22 9 20 245 0.954545455 1.322219295 0.227272727 0.357142857 0.590909091 9 1 0 21 chrX:23804295-23804319 NA NA NA NA NA NA chrX + 24096024 24096045 3'utr EIF2S3 Ensembl G16841.1 ATTATACTACTACTAATTTTT 15 7 14 148 0.933333333 1.146128036 0.533333333 0.444444444 0.666666667 5 1 0 14 chrX:24096024-24096045 minimal NA NA NA NA NA chrX + 24229757 24229798 repeat Low_complexity-AT_rich RepeatMasker G16846.1 TTTTATATCTTAGAATTTTATATTTATTTAAATATTTACCT 52 15 46 789 0.884615385 1.662757832 0 0.175 0.365384615 33 6 0 46 chrX:24229757-24229798 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX + 24230390 24230412 3'utr ZFX Ensembl G16848.1 CTTATTTTACATATTTATACAC 7 4 7 70 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chrX:24230390-24230412 minimal NA NA AUUUA UAUU minimal chrX + 24230650 24230671 3'utr ZFX Ensembl G16849.1 TTTTCATACAATTTCACCTCC 2 2 2 16 1 0.301029996 0.5 0 0 2 0 0 2 chrX:24230650-24230671 NA NA NA NA NA NA chrX + 24231891 24231920 3'utr ZFX Ensembl G16851.1 AACCTTTAAAATCTCCCTTAATTTTTATT 8 4 6 85 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chrX:24231891-24231920 minimal NA NA NA UAUU minimal chrX + 24559987 24560010 NoAnnotation G16853.1 CTCTTTCATTTACTCTATTTTAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chrX:24559987-24560010 minimal NA NA AUUUA UAUU minimal chrX + 24790464 24790488 intron POLA1 Ensembl G16855.1 ATATACTAATTTCTTTTTTTTAAT 3 2 2 42 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:24790464-24790488 NA NA NA NA NA NA chrX + 38665619 38665650 3'utr MID1IP1 Ensembl G16864.1 TCTTAAATTTATTTAAAACTTTTTTTAATCC 5 3 3 69 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chrX:38665619-38665650 minimal NA NA AUUUA UAUU minimal chrX + 41198251 41198272 repeat Low_complexity-AT_rich RepeatMasker G16869.1 CATTTAATTAATTTTATATAT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:41198251-41198272 minimal NA NA AUUUA NA minimal chrX + 43605543 43605566 3'utr MAOA Ensembl G16874.1 ATTTAATTTATTCTAATTAGATT 5 2 5 57 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chrX:43605543-43605566 minimal NA NA AUUUA UAUU minimal chr1 - 205056110 205056132 3'utr RBBP5 Ensembl G1688.1 CACTACTTTTTTCTTAAATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:205056110-205056132 NA NA NA NA UAUU minimal chrX + 47425145 47425167 repeat DNA-MER20B RepeatMasker G16889.1 TATTATTTTATCATAAATTACT 6 2 6 65 1 0.77815125 0 0.25 0.5 3 0 0 6 chrX:47425145-47425167 minimal NA NA NA UAUU minimal chr1 - 205057405 205057427 3'utr RBBP5 Ensembl G1689.1 ATACCTCCTATATTTCCATATT 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:205057405-205057427 NA NA NA NA UAUU minimal chrX + 47425212 47425232 repeat Simple_repeat-(TTATA)n RepeatMasker G16890.1 CTATATTAAAATATATTATT 4 4 4 36 1 0.602059991 0.75 0 0 4 0 0 4 chrX:47425212-47425232 minimal NA NA NA UAUU minimal chrX + 48816540 48816561 repeat SINE-MIRb RepeatMasker G16897.1 CACCCATCCTTAATTTCTATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:48816540-48816561 NA NA NA NA UAUU minimal chrX + 54587545 54587570 NoAnnotation G16910.1 CCAAACCCAATACCCTCTATTTAAC 4 2 2 22 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chrX:54587545-54587570 minimal NA NA AUUUA UAUU minimal chrX + 56593442 56593471 3'utr UBQLN2 Ensembl G16912.1 ATTATATAAATCTTATCCTATATTTCTCT 10 5 9 116 0.9 0.954242509 0 0.125 0.3 7 1 0 9 chrX:56593442-56593471 minimal NA NA NA UAUU minimal chrX + 56843941 56843964 lincRNA RP11-622K12.1 Ensembl G16914.1 TTCTTGTTGTATAACTTTATATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chrX:56843941-56843964 minimal NA NA NA UAUU minimal chrX + 67753304 67753325 repeat Low_complexity-AT_rich RepeatMasker G16925.1 TTTTTCTTTATCATATAATTT 5 2 2 63 0.4 0.301029996 0 0 0 5 3 0 2 chrX:67753304-67753325 minimal NA NA NA NA NA chrX + 70519236 70519260 intron NONO Ensembl G16936.1 CAAACTCAGTCTCTATACTTAATC 6 2 6 42 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chrX:70519236-70519260 NA NA NA NA NA NA chrX + 70520983 70521007 3'utr NONO Ensembl G16939.1 CATCAACCTATTAAAATACATTTT 6 5 5 42 0.833333333 0.698970004 0 0 0 6 1 0 5 chrX:70520983-70521007 NA NA NA NA UAUU minimal chrX + 70684157 70684183 3'utr TAF1 Ensembl G16941.1 TCCTCCTTTATTTAACTCCATTTATT 6 3 5 68 0.833333333 0.698970004 0.166666667 0.2 0.333333333 4 1 0 5 chrX:70684157-70684183 minimal NA NA AUUUA UAUU minimal chrX + 70684694 70684719 repeat Low_complexity-AT_rich RepeatMasker G16942.1 CCCATTATTTTATTATTTAATTATG 15 6 12 179 0.8 1.079181246 0.066666667 0.153846154 0.266666667 11 3 0 12 chrX:70684694-70684719 minimal NA NA AUUUA UAUU minimal chrX + 70795311 70795334 3'utr OGT Ensembl G16944.1 ATTTCTTAATTTATTTTTTACCG 4 3 3 53 0.75 0.477121255 1 0 0 4 1 0 3 chrX:70795311-70795334 minimal NA NA AUUUA UAUU minimal chrX + 73166763 73166790 lincRNA JPX Ensembl G16947.1 AACATTAATAATTTTATTTTATTTATG 5 3 5 66 1 0.698970004 0.6 0 0 5 0 0 5 chrX:73166763-73166790 UUAUUUAU NA NA AUUUA UAUU minimal chrX + 73193110 73193135 lincRNA JPX Ensembl G16949.1 TTTATAACTTTCAATTTAACTTATT 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chrX:73193110-73193135 minimal NA NA AUUUA UAUU minimal chr1 - 205581178 205581199 3'utr ELK4 Ensembl G1695.1 ACTCTATTTTTATTTTACTAG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:205581178-205581199 minimal NA NA NA UAUU minimal chrX + 84344943 84344968 3'utr APOOL Ensembl G16969.1 TTAAACAAATATTTAATATTAGCTT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:84344943-84344968 minimal NA NA AUUUA UAUU minimal chr1 - 205585456 205585480 3'utr ELK4 Ensembl G1697.1 CCTTAATTGGAGTCTAAACTCCAC 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:205585456-205585480 NA NA NA NA NA NA chrX + 84527917 84527938 3'utr ZNF711 Ensembl G16973.1 CATCCCTTTAACAACGCTTTG 7 4 7 42 1 0.84509804 1 0.75 0.857142857 1 0 0 7 chrX:84527917-84527938 NA NA NA NA NA NA chrX + 84528183 84528208 3'utr ZNF711 Ensembl G16974.1 AATAAATTTTTTATCTTTCTTAACT 5 4 4 65 0.8 0.602059991 0 0 0 5 1 0 4 chrX:84528183-84528208 minimal NA NA NA NA NA chrX + 96856393 96856413 3'utr DIAPH2 Ensembl G16984.1 ATAACTTATATATTTTTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chrX:96856393-96856413 minimal NA NA NA UAUU minimal chrX + 100098481 100098509 repeat Low_complexity-AT_rich RepeatMasker G16987.1 TTTTATCATTAATTATTCAATAAATTTT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chrX:100098481-100098509 minimal NA NA NA UAUU minimal chr1 - 205596037 205596066 intron ELK4 Ensembl G1699.1 CCACATATTATTTATCCATTCATCAGTTG 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:205596037-205596066 UUAUUUAU NA NA AUUUA UAUU minimal chrX + 102080564 102080589 lincRNA LL0XNC01-157D4.1 Ensembl G16995.1 ATATCATATATCATATAATTTAGTA 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:102080564-102080589 minimal NA NA AUUUA NA minimal chrX + 102613002 102613022 3'utr WBP5 Ensembl G16998.1 TCCATATTTCTACTTATAAC 4 2 4 32 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chrX:102613002-102613022 minimal NA NA NA UAUU minimal chrX + 102613321 102613346 repeat LINE-L1ME4a RepeatMasker G16999.1 TATTTTCTATATTCCTAAAATTAAC 8 3 6 72 0.666666667 0.477121255 0.111111111 0.125 0.222222222 7 2 1 6 chrX:102613321-102613346 NA NA NA NA UAUU minimal chr1 - 205682761 205682785 3'utr NUCKS1 Ensembl G1700.1 TAACCACTTTATTTAAAAGGTTTT 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:205682761-205682785 minimal NA NA AUUUA UAUU minimal chrX + 103439272 103439292 3'utr FAM199X Ensembl G17001.1 ATCCATTTAATTTCCTATTT 6 2 6 60 1 0.77815125 0.833333333 0.666666667 0.833333333 1 0 0 6 chrX:103439272-103439292 minimal NA NA AUUUA UAUU minimal chrX + 103440235 103440255 3'utr FAM199X Ensembl G17002.1 ATCTATTTTCCTTATATATT 3 3 3 33 1 0.477121255 0.666666667 0 0 3 0 0 3 chrX:103440235-103440255 minimal NA NA NA UAUU minimal chrX + 106894130 106894154 3'utr PRPS1 Ensembl G17007.1 TATTTAATTTTCATCTTCCTTCTT 10 5 7 120 0.9 0.954242509 0.2 0.111111111 0.2 8 1 0 9 chrX:106894130-106894154 minimal NA NA AUUUA UAUU minimal chrX + 108297412 108297443 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G17011.1 TGAAGAAATTCAATGAAGCGCGGGTAAACGG 953 5 17 3773 0.015775635 -1.021189299 0.602979842 0.316384181 0.893952673 121 935 188 18 chrX:108297412-108297443 NA NA NA NA NA NA chrX + 108297723 108297767 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G17014.1 CGGGCCGCCGGTGAAATACCACTACTCTGATCGTTTTTTCACTG 298 8 13 1934 0.037142857 -0.610332517 0.491428571 0.298076923 0.791428571 73 285 52 13 chrX:108297723-108297767 NA NA NA NA NA NA chrX + 108297789 108297831 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G17014.2 GCCCTGAGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC 133 4 10 506 0.045454545 -0.944482672 0.727272727 0.320754717 0.836363636 36 123 87 10 chrX:108297789-108297831 NA NA NA NA NA NA chrX + 110934310 110934336 intron ALG13 Ensembl G17018.1 TAATACCATTTATTTATTTATTTATT 3 2 3 44 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:110934310-110934336 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 205686571 205686602 3'utr NUCKS1 Ensembl G1702.1 ATTTCATATTTCCTTCTCTAAATATATATGT 17 6 12 211 0.705882353 1.079181246 0 0.0625 0.117647059 15 5 0 12 chr1:205686571-205686602 NA NA NA NA UAUU minimal chrX + 117583024 117583050 3'utr WDR44 Ensembl G17027.1 CTAACATACTTTTTTAATTTTTATTG 4 4 4 50 1 0.602059991 0.25 0 0 4 0 0 4 chrX:117583024-117583050 minimal NA NA NA UAUU minimal chr1 - 205686701 205686723 3'utr NUCKS1 Ensembl G1703.1 CTTTCTTTTTTATTTCATCACT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:205686701-205686723 minimal NA NA NA UAUU minimal chrX + 118718194 118718214 3'utr UBE2A Ensembl G17031.1 ATATTTATACTTTTAGATAT 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chrX:118718194-118718214 minimal NA NA AUUUA UAUU minimal chrX + 119390502 119390524 3'utr ZBTB33 Ensembl G17034.1 ACACATATTTAAACACTTAGAA 27 2 27 135 0.964285714 1.130333768 0.071428571 0.5 0.892857143 3 0 1 27 chrX:119390502-119390524 minimal NA NA AUUUA UAUU minimal chrX + 123041220 123041241 3'utr XIAP Ensembl G17043.1 TATTATCCATTTTTTTTACTG 6 3 5 72 0.833333333 0.698970004 0.833333333 0.25 0.5 3 1 0 5 chrX:123041220-123041241 minimal NA NA NA UAUU minimal chrX + 123042865 123042889 3'utr XIAP Ensembl G17044.1 CAAATTTATTTTATTTATTTAATT 8 4 8 112 1 0.903089987 0 0.25 0.625 3 0 0 8 chrX:123042865-123042889 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX + 123234786 123234808 3'utr STAG2 Ensembl G17050.1 AATTCTCTTACATTTATTTACT 5 3 4 54 0.8 0.602059991 0.2 0.25 0.4 3 1 0 4 chrX:123234786-123234808 minimal NA NA AUUUA UAUU minimal chrX + 123235312 123235333 repeat Low_complexity-AT_rich RepeatMasker G17052.1 ATCTAAATTTTAAATAAAATT 5 2 2 43 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chrX:123235312-123235333 NA NA NA NA NA NA chrX + 123235383 123235410 3'utr STAG2 Ensembl G17053.1 TTTTTTCTTACTTTTAAATTCCAACTT 3 2 3 41 0.75 0.176091259 0 0 0 4 0 1 3 chrX:123235383-123235410 NA NA NA NA NA NA chrX + 123235759 123235787 3'utr STAG2 Ensembl G17056.1 TTTAAAACAAAATATTAACTTATATTAC 7 3 7 52 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chrX:123235759-123235787 minimal NA NA NA UAUU minimal chrX + 123236231 123236252 3'utr STAG2 Ensembl G17058.1 TTTTATATATTACTCTAACCT 4 2 4 38 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chrX:123236231-123236252 minimal NA NA NA UAUU minimal chrX + 128726470 128726495 3'utr OCRL Ensembl G17062.1 TCATCTTTTTTATTATAATTTATTG 5 4 5 73 1 0.698970004 0.6 0 0 5 0 0 5 chrX:128726470-128726495 minimal NA NA AUUUA UAUU minimal chrX + 129190537 129190571 3'utr BCORL1 Ensembl G17063.1 TCTTCTGTAGTATTTATTTTATTAGTATTTAATT 23 7 21 322 0.913043478 1.322219295 0.217391304 0.333333333 0.565217391 10 2 0 21 chrX:129190537-129190571 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX + 131209103 131209126 3'utr AL109749.1 Ensembl G17067.1 TCCTATAAACTATTTATATATTT 3 2 2 33 0.5 0 0 0 0 4 1 1 2 chrX:131209103-131209126 minimal NA NA AUUUA UAUU minimal chrX + 131209267 131209288 3'utr AL109749.1 Ensembl G17068.1 TTAATTTTCACTTATATTTAT 13 5 7 160 0.538461538 0.84509804 0.769230769 0.375 0.615384615 5 6 0 7 chrX:131209267-131209288 minimal NA NA AUUUA UAUU minimal chrX + 133560621 133560657 3'utr PHF6 Ensembl G17073.1 ACCACTATTTTAGAAACTTTATTTAATATTTTAATG 13 3 11 140 0.846153846 1.041392685 0.153846154 0.375 0.615384615 5 2 0 11 chrX:133560621-133560657 minimal NA NA AUUUA UAUU minimal chrX + 133654847 133654869 repeat Low_complexity-AT_rich RepeatMasker G17075.1 CATTTTTATTAATTAATTTATT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chrX:133654847-133654869 minimal NA NA AUUUA UAUU minimal chr1 - 207220202 207220223 3'utr YOD1 Ensembl G1708.1 TAATTTATACTGTGCCAGGCA 3 2 3 14 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:207220202-207220223 minimal NA NA AUUUA NA minimal chr1 - 207220959 207220985 3'utr YOD1 Ensembl G1709.1 TTTTCTACCTCTTTTCTTAATTATTC 6 5 5 81 0.833333333 0.698970004 0 0 0 6 1 0 5 chr1:207220959-207220985 minimal NA NA NA UAUU minimal chr1 + 43167063 43167084 intron YBX1 Ensembl G171.1 TTAATTACATTATTATTTATG 6 3 6 64 1 0.77815125 1 0.666666667 0.833333333 1 0 0 6 chr1:43167063-43167084 UUAUUUAU NA NA AUUUA UAUU minimal chrX + 150157226 150157250 3'utr HMGB3 Ensembl G17100.1 TATTACATTTTTAAAACTCTTCTC 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:150157226-150157250 NA NA NA NA UAUU minimal chrX + 150574659 150574682 3'utr VMA21 Ensembl G17101.1 CCATCTAAAAATAACCTCTATTT 6 3 5 40 0.625 0.22184875 0.125 0.6 0.75 2 1 2 5 chrX:150574659-150574682 NA NA NA NA UAUU minimal chrX + 150577167 150577188 repeat DNA-MamRep434 RepeatMasker G17103.1 TCACCTTAAAAATAAATTATT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chrX:150577167-150577188 minimal NA NA NA UAUU minimal chrX + 152613898 152613928 3'utr ZNF275 Ensembl G17108.1 TCTTAAAATATTTAATTTATTAATTTAGTT 16 5 12 189 0.75 1.079181246 0 0.25 0.625 6 4 0 12 chrX:152613898-152613928 minimal NA NA AUUUA UAUU minimal chrX + 153664510 153664532 3'utr ATP6AP1 Ensembl G17112.1 TCTCCTTTCTCCTTATTTATTC 3 2 2 37 0.5 0 0.25 0 0 4 1 1 2 chrX:153664510-153664532 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX + 153671408 153671443 3'utr GDI1 Ensembl G17114.1 TTGCATTCCTCCCCCCTAATTTATTCTAATTTATT 34 12 26 325 0.722222222 0.937852093 0 0.09375 0.194444444 29 8 2 26 chrX:153671408-153671443 minimal NA NA AUUUA UAUU minimal chrX + 154467237 154467258 repeat Low_complexity-AT_rich RepeatMasker G17117.1 ATAAACACCATTTTATTTATT 10 3 7 92 0.7 0.84509804 0 0.333333333 0.6 4 3 0 7 chrX:154467237-154467258 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 10415683 10415711 3'utr MID1 Ensembl G17125.1 ATTCTATATATTTACTATATTATTTATA 16 7 13 223 0.764705882 0.812913357 0 0.214285714 0.352941176 11 3 1 13 chrX:10415683-10415711 UUAUUUAU NA NA AUUUA UAUU minimal chrX - 10415715 10415737 3'utr MID1 Ensembl G17126.1 ACACTCTCCTTTTTCTTAACAG 6 2 6 48 1 0.77815125 0 0.25 0.5 3 0 0 6 chrX:10415715-10415737 NA NA NA NA NA NA chrX - 18258441 18258464 3'utr SCML2 Ensembl G17150.1 TACTTTACCATATTTATATATTG 6 3 6 62 0.857142857 0.477121255 0 0.2 0.428571429 4 0 1 6 chrX:18258441-18258464 minimal NA NA AUUUA UAUU minimal chrX - 18258786 18258815 3'utr SCML2 Ensembl G17151.1 CCATATAAATTATTTTCCTTTTATTATTT 10 4 9 138 0.818181818 0.653212514 0 0.375 0.545454545 5 1 1 9 chrX:18258786-18258815 minimal NA NA NA UAUU minimal chrX - 20142784 20142807 3'utr EIF1AX Ensembl G17156.1 ATAATATTTTATTCTTAAATCTT 2 2 2 22 0.666666667 0 0 0 0 3 0 1 2 chrX:20142784-20142807 minimal NA NA NA UAUU minimal chr1 - 211745644 211745672 3'utr SLC30A1 Ensembl G1716.1 TAATTCTACAATATAAAAATATTTATTT 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:211745644-211745672 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX - 20265235 20265255 intron RPS6KA3 Ensembl G17160.1 ATTAATACTCTTTATTTATG 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:20265235-20265255 UUAUUUAU NA NA AUUUA UAUU minimal chrX - 24002415 24002437 3'utr KLHL15 Ensembl G17167.1 TCCTAAAAATTAGTTTATCCAG 3 2 3 21 1 0.477121255 0 0 0 3 0 0 3 chrX:24002415-24002437 minimal NA NA NA NA NA chrX - 24002725 24002746 3'utr KLHL15 Ensembl G17169.1 TTATAATATAAATTGTTATTT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:24002725-24002746 minimal NA NA NA UAUU minimal chrX - 24002776 24002802 3'utr KLHL15 Ensembl G17170.1 TTCAGTGGGACTATTTTTATATATGT 9 4 9 85 1 0.954242509 0 0.166666667 0.444444444 5 0 0 9 chrX:24002776-24002802 minimal NA NA NA UAUU minimal chrX - 24003246 24003270 3'utr KLHL15 Ensembl G17172.1 ATCTTCATTAATTACATCTTAATT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chrX:24003246-24003270 NA NA NA NA NA NA chrX - 24003514 24003543 3'utr KLHL15 Ensembl G17173.1 ATTAACTTACATTCCCTTTTAAAATTATG 60 9 51 582 0.85 1.707570176 0 0.433333333 0.716666667 17 9 0 51 chrX:24003514-24003543 minimal NA NA NA NA NA chrX - 24003546 24003582 3'utr KLHL15 Ensembl G17174.1 TTTATATGTAGTTCTAATTTAGGTTATTTTAAATCC 29 5 27 356 0.870967742 0.954242509 0 0.2 0.483870968 16 2 2 27 chrX:24003546-24003582 minimal NA NA AUUUA UAUU minimal chrX - 24003925 24003945 3'utr KLHL15 Ensembl G17175.1 CTTCATTATTTTCCTCATTG 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:24003925-24003945 minimal NA NA NA UAUU minimal chrX - 24003987 24004016 3'utr KLHL15 Ensembl G17176.1 CCATTTAATTTTTTTCTACATTAGTTTAG 7 5 5 88 0.857142857 0.77815125 0 0 0 7 1 0 6 chrX:24003987-24004016 minimal NA NA AUUUA NA minimal chrX - 24004038 24004074 3'utr KLHL15 Ensembl G17177.1 TCTTTTTCTACATTTAAAAAATACATTATTTTATTT 5 4 4 62 0.8 0.602059991 0 0 0 5 1 0 4 chrX:24004038-24004074 minimal NA NA AUUUA UAUU minimal chrX - 24004145 24004166 3'utr KLHL15 Ensembl G17178.1 ACTTATATTTTCATTAACTAG 24 7 20 220 0.8 1 0 0.307692308 0.64 9 4 1 20 chrX:24004145-24004166 minimal NA NA NA UAUU minimal chrX - 24004173 24004204 3'utr KLHL15 Ensembl G17179.1 ATTTCAAAAATCAATAATAATCTTATTTTAT 30 7 27 249 0.870967742 1.130333768 0 0.166666667 0.35483871 20 3 1 27 chrX:24004173-24004204 minimal NA NA NA UAUU minimal chrX - 24004511 24004537 3'utr KLHL15 Ensembl G17180.1 ATCTATACTGGCAAAACTTGCCAGAT 4 2 3 22 0.75 0.477121255 0 0 0 4 1 0 3 chrX:24004511-24004537 NA NA NA NA NA NA chrX - 24005166 24005192 3'utr KLHL15 Ensembl G17181.1 AAAACTAACACTTTATATTTTATTTT 22 5 20 205 0.909090909 1.301029996 0 0.333333333 0.545454545 10 2 0 20 chrX:24005166-24005192 minimal NA NA NA UAUU minimal chrX - 24005301 24005327 3'utr KLHL15 Ensembl G17182.1 TCTTTTCACATATTAACATTTTTAGA 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:24005301-24005327 NA NA NA NA UAUU minimal chrX - 24005598 24005626 3'utr KLHL15 Ensembl G17185.1 TTATACTTTTTAGTTTTATTATTTAAAA 64 9 60 911 0.9375 1.77815125 0 0.268292683 0.53125 30 4 0 60 chrX:24005598-24005626 minimal NA NA AUUUA UAUU minimal chrX - 24037118 24037141 intron KLHL15 Ensembl G17188.1 CTATTCTTTATTTATGTATTTAT 5 2 2 53 0.333333333 0 0 0.25 0.5 3 3 1 2 chrX:24037118-24037141 UUAUUUAU NA NA AUUUA UAUU minimal chrX - 25965799 25965819 NoAnnotation G17189.1 CAATATTCTACTATTTATTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chrX:25965799-25965819 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX - 30846435 30846468 3'utr TAB3 Ensembl G17192.1 TTTAATTTTTAAGGAGCTGGTCTCAATTTTAGT 5 2 5 58 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chrX:30846435-30846468 NA NA NA NA NA NA chrX - 30846775 30846796 3'utr TAB3 Ensembl G17193.1 ACTATACATTTTACATTATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:30846775-30846796 minimal NA NA NA UAUU minimal chr1 - 211840154 211840179 3'utr NEK2 Ensembl G1720.1 CTTATTTTTATTATCATTATTTATT 3 2 2 45 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:211840154-211840179 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 34336052 34336077 lincRNA RP11-545D19.1 Ensembl G17200.1 TTCTTTTATTAATTATTTATTTCTT 4 3 3 61 0.75 0.477121255 0 0 0 4 1 0 3 chrX:34336052-34336077 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 34336355 34336380 lincRNA RP11-545D19.1 Ensembl G17201.1 TATATATAATTTTCTATTTCTTTTT 3 3 3 43 1 0.477121255 0 0 0 3 0 0 3 chrX:34336355-34336380 NA NA NA NA UAUU minimal chrX - 34338231 34338255 lincRNA RP11-545D19.1 Ensembl G17203.1 ATATTTAAATATACTTATCTATTG 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chrX:34338231-34338255 minimal NA NA AUUUA UAUU minimal chrX - 34342054 34342080 lincRNA RP11-545D19.1 Ensembl G17205.1 TTTCAACTTTTATCACTTATTTATTT 3 2 2 43 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:34342054-34342080 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 34342082 34342111 lincRNA RP11-545D19.1 Ensembl G17206.1 TAATTACAATTTATTTATTTACTTATTTG 8 7 8 101 1 0.903089987 0 0 0 8 0 0 8 chrX:34342082-34342111 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 212150277 212150300 intron INTS7 Ensembl G1721.1 TTATATAATTTATTCATATTATG 6 5 6 69 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:212150277-212150300 minimal NA NA AUUUA UAUU minimal chrX - 39910623 39910645 3'utr BCOR Ensembl G17212.1 TACATAAAACTAAAATTTTCTG 5 2 4 35 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chrX:39910623-39910645 NA NA NA NA NA NA chrX - 39910796 39910818 3'utr BCOR Ensembl G17213.1 AAACTTTTATATCCTAATTTAA 8 4 8 72 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chrX:39910796-39910818 minimal NA NA AUUUA NA minimal chrX - 39911285 39911305 3'utr BCOR Ensembl G17215.1 TCATAATACAACTATTTCTG 7 4 7 49 1 0.84509804 0 0.75 0.857142857 1 0 0 7 chrX:39911285-39911305 NA NA NA NA UAUU minimal chr1 - 212150407 212150427 intron INTS7 Ensembl G1722.1 AAACTTTATCATACTACTTG 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr1:212150407-212150427 minimal NA NA NA NA NA chrX - 41379312 41379337 3'utr CASK Ensembl G17221.1 CTTTCTATAATCTATTTTAATAATA 4 2 3 47 0.6 0.176091259 0 0 0 5 1 1 3 chrX:41379312-41379337 NA NA NA NA UAUU minimal chrX - 45605608 45605630 miRNA hsa-mir-221 miRBase G17226.1 AGCTACATTGTCTGCTGGGTTT 33 2 2 249 0.048780488 -0.653212514 0 0.272727273 0.804878049 8 31 8 2 chrX:45605608-45605630 NA NA NA NA NA NA chrX - 48830293 48830321 3'utr GRIPAP1 Ensembl G17232.1 ACCAACTCTTTTTTATTTTATTTTATTT 8 3 6 111 0.75 0.77815125 0 0.6 0.75 2 2 0 6 chrX:48830293-48830321 minimal NA NA NA UAUU minimal chrX - 53221368 53221408 3'utr KDM5C Ensembl G17236.1 CCTATTTTAATTTTATTTTATTATTTTCCTCTTGTTAGAA 65 13 60 978 0.895522388 1.301029996 0 0.358974359 0.626865672 25 5 2 60 chrX:53221368-53221408 minimal NA NA NA UAUU minimal chrX - 53238565 53238593 intron KDM5C Ensembl G17239.1 TAATATTTTTTTATTATAAAATTTAGTG 4 3 4 53 0.8 0.301029996 0.2 0 0 5 0 1 4 chrX:53238565-53238593 minimal NA NA AUUUA UAUU minimal chrX - 53666548 53666581 intron HUWE1 Ensembl G17246.1 TATTCTTCTCTATATATTATCTTCATATTATAT 3 2 3 44 1 0.477121255 0 0 0 3 0 0 3 chrX:53666548-53666581 minimal NA NA NA UAUU minimal chr1 - 212192881 212192906 intron INTS7 Ensembl G1725.1 TATCATATCTATAACTTTTTATATC 4 2 4 43 1 0.602059991 0 0 0 4 0 0 4 chr1:212192881-212192906 minimal NA NA NA NA NA chrX - 53963361 53963385 3'utr PHF8 Ensembl G17251.1 ATTTCTATTCACCTTTAATATATT 6 2 5 67 0.833333333 0.698970004 0 0.666666667 0.833333333 1 1 0 5 chrX:53963361-53963385 NA NA NA NA UAUU minimal chrX - 62568712 62568736 3'utr SPIN4 Ensembl G17256.1 TTTCTTCTAATAACTTTATTATTT 4 2 4 36 1 0.602059991 0 1 1 0 0 0 4 chrX:62568712-62568736 minimal NA NA NA UAUU minimal chrX - 63406281 63406302 3'utr FAM123B Ensembl G17259.1 TCAATTATCTATTTTTATATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chrX:63406281-63406302 minimal NA NA NA UAUU minimal chr1 - 212194458 212194486 coding INTS7 Ensembl G1726.1 TATCCATTCCCTATTCTTATCAATTCTG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr1:212194458-212194486 minimal NA NA NA UAUU minimal chrX - 70278761 70278800 NoAnnotation G17267.1 CTAATTTGGGCAGAATATATTTATTATATATGTGTGTGT 6 4 6 61 1 0.77815125 0 0 0 6 0 0 6 chrX:70278761-70278800 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX - 70278940 70278961 NoAnnotation G17268.1 AATCTTAACTTATCTTAATGA 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chrX:70278940-70278961 minimal NA NA NA NA NA chrX - 71424629 71424649 3'utr ERCC6L Ensembl G17269.1 ATATTCTATAAATTTAACTG 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chrX:71424629-71424649 minimal NA NA AUUUA UAUU minimal chrX - 71475537 71475563 NoAnnotation G17270.1 CTATTATCTGGGGGTGGTAATTATTG 8 5 8 66 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chrX:71475537-71475563 minimal NA NA NA UAUU minimal chrX - 71475583 71475613 NoAnnotation G17271.1 TCCTCTCTCCCTTCCCCCATCCGCCCCCTG 6 2 4 32 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chrX:71475583-71475613 NA NA NA NA NA NA chrX - 73040830 73040857 lincRNA XIST Ensembl G17276.1 CATCACTACCACTACTGATTAAACAAG 2 2 2 8 1 0.301029996 0 0 0 2 0 0 2 chrX:73040830-73040857 NA NA NA NA NA NA chrX - 73042777 73042800 lincRNA XIST Ensembl G17277.1 CACTTTATCTCATTTATCTTATG 7 4 6 76 0.75 0.477121255 0 0.333333333 0.5 4 1 1 6 chrX:73042777-73042800 minimal NA NA AUUUA NA minimal chrX - 73043849 73043873 lincRNA XIST Ensembl G17279.1 CACAAACATTTATTATCATTATTG 4 2 3 35 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chrX:73043849-73043873 minimal NA NA AUUUA UAUU minimal chrX - 73044705 73044725 lincRNA XIST Ensembl G17280.1 TTATCCTCTATACTATTCAG 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chrX:73044705-73044725 minimal NA NA NA UAUU minimal chrX - 73046238 73046263 lincRNA XIST Ensembl G17282.1 TTTCTATTCACATCTTCTCCACTTG 5 2 5 54 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chrX:73046238-73046263 NA NA NA NA UAUU minimal chrX - 73046296 73046318 lincRNA XIST Ensembl G17283.1 CTTTAAATCACAGCTTTTACCT 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:73046296-73046318 NA NA NA NA NA NA chrX - 73047155 73047179 lincRNA XIST Ensembl G17285.1 TAATCTCTCCTTAAATATTTCTTT 10 6 9 97 1 1 0 0.25 0.4 6 0 0 10 chrX:73047155-73047179 NA NA NA NA UAUU minimal chrX - 73047228 73047252 lincRNA XIST Ensembl G17286.1 CTTCTTCCCTTTCTACTCACCTTT 4 2 3 41 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chrX:73047228-73047252 NA NA NA NA NA NA chrX - 73047952 73047972 lincRNA XIST Ensembl G17289.1 AACAATAGTTTATTATAATT 2 2 2 13 1 0.301029996 0 0 0 2 0 0 2 chrX:73047952-73047972 minimal NA NA NA UAUU minimal chr1 - 212538322 212538347 3'utr TMEM206 Ensembl G1729.1 TTATTTAAATATTTAAATTATTAAT 5 4 5 61 1 0.698970004 0 0 0 5 0 0 5 chr1:212538322-212538347 minimal NA NA AUUUA UAUU minimal chrX - 73055661 73055687 lincRNA XIST Ensembl G17292.1 TATAATTTTAATATTTTATATTAGAT 4 3 4 53 1 0.602059991 0 0 0 4 0 0 4 chrX:73055661-73055687 minimal NA NA NA UAUU minimal chrX - 73056767 73056791 lincRNA XIST Ensembl G17293.1 ATATTTTATACTCTGGGTTATAAT 3 2 2 27 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:73056767-73056791 minimal NA NA NA UAUU minimal chrX - 73057740 73057766 lincRNA XIST Ensembl G17294.1 TATATTTTAACATCAAAATTACCTAT 3 2 3 25 1 0.477121255 0 0 0 3 0 0 3 chrX:73057740-73057766 NA NA NA NA UAUU minimal chrX - 73058227 73058251 lincRNA XIST Ensembl G17295.1 TATTATTTTCCTTAACCAATTAGA 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:73058227-73058251 minimal NA NA NA UAUU minimal chrX - 73058251 73058279 lincRNA XIST Ensembl G17296.1 ACTTCTTAAATTATGGGTAGACTTAAAG 5 2 4 40 0.8 0.602059991 0 0.666666667 0.8 1 1 0 4 chrX:73058251-73058279 minimal NA NA NA NA NA chrX - 73061618 73061642 lincRNA XIST Ensembl G17297.1 CCACCTTTTTTATTAATTATTATA 4 2 3 47 0.75 0.477121255 0 0 0 4 1 0 3 chrX:73061618-73061642 minimal NA NA NA UAUU minimal chrX - 73437594 73437621 NoAnnotation G17310.1 TTCATATTTTCTTTATCTTATTTATTG 4 3 3 66 0.75 0.477121255 0 0 0 4 1 0 3 chrX:73437594-73437621 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 73446335 73446359 NoAnnotation G17313.1 ATCATATTTTAAAAATATTTATTC 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:73446335-73446359 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chrX - 73449558 73449584 NoAnnotation G17314.1 CTCTCAATTTTATTTTATTTATCTCT 4 2 2 49 0.5 0.301029996 0 0 0 4 2 0 2 chrX:73449558-73449584 UUAUUUAU NA NA AUUUA UAUU minimal chrX - 73806301 73806334 3'utr RLIM Ensembl G17321.1 CATACCCTCCAACATTCTAAAAATTATTTATTT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chrX:73806301-73806334 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 73806930 73806960 3'utr RLIM Ensembl G17322.1 TCACTTATTTATTTTTATTTTATTTTATTT 26 9 23 454 0.884615385 1.361727836 0 0.263157895 0.461538462 14 3 0 23 chrX:73806930-73806960 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 73807095 73807119 3'utr RLIM Ensembl G17323.1 TTTTTTTCCCTTTAATTCTTCAGT 4 3 4 52 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chrX:73807095-73807119 NA NA NA NA NA NA chrX - 73807214 73807236 3'utr RLIM Ensembl G17324.1 TTTGCAGGGCACTTTTATTCTC 4 2 2 37 0.5 0.301029996 0 0 0 4 2 0 2 chrX:73807214-73807236 minimal NA NA NA UAUU minimal chrX - 73809225 73809257 3'utr RLIM Ensembl G17329.1 TAATACATTTTATCTTTTTAAAAATTTGTCCG 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chrX:73809225-73809257 minimal NA NA NA NA NA chrX - 73809285 73809309 3'utr RLIM Ensembl G17330.1 CTTCACTTATTTTTTTTAATATAA 25 10 22 320 0.88 1.342422681 0 0.263157895 0.44 14 3 0 22 chrX:73809285-73809309 minimal NA NA NA UAUU minimal chrX - 73810384 73810409 3'utr RLIM Ensembl G17331.1 CAGAACATATCTATAATATTTAATG 12 5 9 95 0.75 0.954242509 0 0.2 0.333333333 8 3 0 9 chrX:73810384-73810409 minimal NA NA AUUUA UAUU minimal chrX - 76917203 76917223 intron ATRX Ensembl G17339.1 TTAAATAATATATATTGGGT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:76917203-76917223 NA NA NA NA UAUU minimal chrX - 76929050 76929080 intron ATRX Ensembl G17341.1 TCTAACCTATAAATTAATTTCTATTTAATT 7 4 6 87 0.857142857 0.77815125 0 0 0 7 1 0 6 chrX:76929050-76929080 minimal NA NA AUUUA UAUU minimal chrX - 76930119 76930144 intron ATRX Ensembl G17343.1 ATTTACTTTAATTTCATATTTAACC 11 3 11 129 1 1.041392685 0 0.4 0.727272727 3 0 0 11 chrX:76930119-76930144 minimal NA NA AUUUA UAUU minimal chrX - 76930151 76930180 intron ATRX Ensembl G17344.1 TTTTAAACATTCTATATCTTAATTTAACT 4 2 3 50 0.75 0.477121255 0 0 0 4 1 0 3 chrX:76930151-76930180 minimal NA NA AUUUA NA minimal chrX - 77040688 77040715 intron ATRX Ensembl G17346.1 CCCTATCTTTATTTACTTATTTATTCC 7 6 7 98 0.875 0.544068044 0 0 0 8 0 1 7 chrX:77040688-77040715 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 86453108 86453130 NoAnnotation G17358.1 CTTCACTTATTTTTTTCAATAT 5 2 2 62 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chrX:86453108-86453130 minimal NA NA NA UAUU minimal chrX - 100598124 100598147 NoAnnotation G17365.1 TTATTTATTACTATATTATTTAG 6 4 5 79 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chrX:100598124-100598147 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 100598147 100598183 NoAnnotation G17366.1 TTCTTTAGTCTTTTCCTTATTATTATATTTATTATG 71 15 61 1057 0.824324324 1.183269844 0 0.25 0.432432432 42 10 3 61 chrX:100598147-100598183 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 217601376 217601400 3'utr GPATCH2 Ensembl G1737.1 TTACTTTTATTTTTAAACTATATG 3 2 3 38 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:217601376-217601400 minimal NA NA NA UAUU minimal chrX - 107330508 107330535 intron PSMD10 Ensembl G17378.1 CCATAATTTAATCATTCCTCTATTACT 6 4 5 57 0.833333333 0.698970004 0 0 0 6 1 0 5 chrX:107330508-107330535 minimal NA NA AUUUA UAUU minimal chrX - 107963212 107963242 NoAnnotation G17380.1 TATATCTATATATATCTGACTTGCCTTTCC 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:107963212-107963242 NA NA NA NA NA NA chrX - 107963435 107963455 NoAnnotation G17381.1 ATATCAGGCATAGTCACTTG 6 2 6 30 1 0.77815125 0 0.5 0.833333333 1 0 0 6 chrX:107963435-107963455 NA NA NA NA NA NA chrX - 107963529 107963554 NoAnnotation G17382.1 TTTACCAACTTATCACTTACCTTCC 3 2 3 19 1 0.477121255 0.333333333 0 0 3 0 0 3 chrX:107963529-107963554 minimal NA NA NA NA NA chrX - 107963603 107963626 NoAnnotation G17383.1 TTCTCATTATTTATTAGTTTACA 9 3 9 107 1 0.954242509 0 0.4 0.666666667 3 0 0 9 chrX:107963603-107963626 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chrX - 107964076 107964098 NoAnnotation G17384.1 ATGGTGGGCTCTTTTTTCCCTC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:107964076-107964098 NA NA NA NA NA NA chrX - 107964101 107964125 NoAnnotation G17385.1 ATTTTTCCTTGCCTACCAACCAAA 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chrX:107964101-107964125 NA NA NA NA NA NA chrX - 107964850 107964872 NoAnnotation G17388.1 CCTCTCCCCACTTTCAACCTCT 3 2 3 16 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:107964850-107964872 NA NA NA NA NA NA chrX - 107964950 107964981 NoAnnotation G17389.1 TATTTCCAAACCTATTATTTTTCATTTATTG 41 9 35 462 0.813953488 1.06694679 0 0.181818182 0.372093023 27 6 2 35 chrX:107964950-107964981 minimal NA NA AUUUA UAUU minimal chrX - 107965515 107965541 NoAnnotation G17391.1 ATTTCTAATTAACAATATTTACACTG 23 4 21 211 0.913043478 1.322219295 0 0.230769231 0.565217391 10 2 0 21 chrX:107965515-107965541 minimal NA NA AUUUA UAUU minimal chrX - 107969413 107969441 repeat DNA-Tigger16b RepeatMasker G17394.1 CTATAAACCTATCCACCATTAATTTATG 5 2 4 43 0.666666667 0.301029996 0 0.2 0.333333333 4 1 1 4 chrX:107969413-107969441 minimal NA NA AUUUA NA minimal chrX - 107969967 107969989 NoAnnotation G17395.1 AATATCTAATTCCCTATATATT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chrX:107969967-107969989 NA NA NA NA UAUU minimal chrX - 114346164 114346190 3'utr LRCH2 Ensembl G17404.1 AATTAAATTATTAGTAATTTATTATT 5 2 5 57 1 0.698970004 0 0.25 0.4 3 0 0 5 chrX:114346164-114346190 minimal NA NA AUUUA UAUU minimal chrX - 114347347 114347370 3'utr LRCH2 Ensembl G17406.1 TTATTTAATACACTTCTAATTCT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chrX:114347347-114347370 minimal NA NA AUUUA UAUU minimal chrX - 119059046 119059069 3'utr NKAP Ensembl G17414.1 CCTTCTATTTAATTCTTTCAGTC 5 3 3 54 0.6 0.477121255 0 0 0 5 2 0 3 chrX:119059046-119059069 minimal NA NA AUUUA UAUU minimal chrX - 119759798 119759826 3'utr C1GALT1C1 Ensembl G17418.1 CAAATAAACTATTAATAAATATTATATG 6 4 5 48 0.833333333 0.698970004 0 0 0 6 1 0 5 chrX:119759798-119759826 minimal NA NA NA UAUU minimal chr1 - 217783236 217783262 3'utr GPATCH2 Ensembl G1742.1 TAAATTATATATTTTTCTCTTTTATG 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr1:217783236-217783262 minimal NA NA NA UAUU minimal chrX - 122752640 122752663 intron THOC2 Ensembl G17421.1 TATTAATTCTTACCTATTATTCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chrX:122752640-122752663 minimal NA NA NA UAUU minimal chrX - 129337952 129337978 3'utr ZNF280C Ensembl G17431.1 CAATACTAATATTCTCATTTTTAAAC 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chrX:129337952-129337978 NA NA NA NA UAUU minimal chrX - 133905676 133905699 3'utr FAM122B Ensembl G17439.1 CTTTTAATTATATTAAATTTTTA 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chrX:133905676-133905699 minimal NA NA NA UAUU minimal chrX - 134184982 134185005 3'utr FAM127B Ensembl G17440.1 TTTTTCCTTATTTTTAATAAATG 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:134184982-134185005 minimal NA NA NA UAUU minimal chrX - 135886882 135886904 NoAnnotation G17443.1 CACCACACTTATTTAATTATTA 3 2 3 24 1 0.477121255 0 0 0 3 0 0 3 chrX:135886882-135886904 minimal NA NA AUUUA UAUU minimal chrX - 135956179 135956200 3'utr RBMX Ensembl G17445.1 TTACTTTTTTTAAATTCCCTG 4 2 2 46 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chrX:135956179-135956200 NA NA NA NA NA NA chrX - 138233897 138233918 intron FGF13 Ensembl G17452.1 TACATTTTAATTTAATTTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chrX:138233897-138233918 minimal NA NA AUUUA UAUU minimal chrX - 150066149 150066171 intron CD99L2 Ensembl G17462.1 AATCTTCTTACACTTATTTATA 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chrX:150066149-150066171 UUAUUUAU NA NA AUUUA UAUU minimal chrX - 153287281 153287302 3'utr MECP2 Ensembl G17468.1 TAACCTATTTATTATATAAAG 5 3 5 37 1 0.698970004 0 0.25 0.4 3 0 0 5 chrX:153287281-153287302 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 220324235 220324258 3'utr RAB3GAP2 Ensembl G1747.1 ATTCTATATTTCCTATCTAAAAT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:220324235-220324258 NA NA NA NA UAUU minimal chrY + 3235816 3235839 tRNA tRNA-tRNA-Glu-GAG_ RepeatMasker G17479.1 CCCTGTGGTCTAGTGGTTAGGAT 19 3 4 148 0.129032258 -0.511883361 0.161290323 0.416666667 0.774193548 7 15 12 4 chrY:3235816-3235839 NA NA NA NA NA NA chrY + 10035450 10035475 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G17484.1 AGGATCCATTGGAGGGCAAGTCTGG 160 3 4 751 0.021390374 -0.84509804 0.844919786 0.333333333 0.786096257 40 156 27 4 chrY:10035450-10035475 NA NA NA NA NA NA chrY + 10036105 10036143 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G17487.1 ATGGGAAACCTCACCCGGCCCGGACATGGACAGGATTG 683 3 568 712 0.802259887 1.339374988 0.653954802 0.516129032 0.957627119 30 115 25 568 chrY:10036105-10036143 NA NA NA NA NA NA chrY + 10036537 10036598 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G17492.1 TACACACTGCCAGTCGCTACTACTGATTGGATGGTTTAGTGAGGCCCTTGGATCGGCCCCG 20 3 20 118 0.909090909 0.823908741 0.5 0.235294118 0.409090909 13 0 2 20 chrY:10036537-10036598 NA NA NA NA NA NA chrY + 10037762 10037800 rRNA RN5-8S6 Ensembl G17493.1 TGACTTTTAGCGGTGGATCACTCGGCTCCTGCGTTGAT 432 2 429 2635 0.807909605 0.632457292 0.519774011 0.587301587 0.951035782 26 3 99 429 chrY:10037762-10037800 NA NA NA NA NA NA chrY + 10037808 10037874 piRNA chrY-FR264146-36847 ncRNA.org G17494.1 CAGCTAGCTGTGAGAATTAATGTGAATTGCAGGACACATTGATCATCGACACTTCGAACGCACTTG 6585 12 176 38975 0.021656208 -0.942853258 0.547557524 0.438985737 0.956441491 354 6409 1542 176 chrY:10037808-10037874 NA NA NA NA NA NA chrY - 13331737 13331759 NoAnnotation G17497.1 CTCATTTTATTCAATATTTATG 7 5 7 77 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chrY:13331737-13331759 minimal NA NA AUUUA UAUU minimal chr1 - 222731875 222731911 3'utr TAF1A Ensembl G1755.1 CTTATATTACTACAAAAAACTTATTTTTATATATTT 12 5 10 137 0.833333333 1 0 0.333333333 0.5 6 2 0 10 chr1:222731875-222731911 minimal NA NA NA UAUU minimal chr1 - 224050995 224051022 NoAnnotation G1761.1 CTTAACACTTTTTTATTTTGTTTTATT 6 2 2 76 0.333333333 0.301029996 0 0.25 0.5 3 4 0 2 chr1:224050995-224051022 minimal NA NA NA UAUU minimal chr1 - 224140056 224140083 repeat DNA-MER1A RepeatMasker G1762.1 AATTCTATAATTATTTTATTATATATT 11 8 10 144 0.909090909 1 0 0 0 11 1 0 10 chr1:224140056-224140083 minimal NA NA NA UAUU minimal chr1 - 224516952 224516976 repeat LINE-L2a RepeatMasker G1765.1 TATCTACATACTCTATTATCTATG 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr1:224516952-224516976 minimal NA NA NA UAUU minimal chr1 - 224573970 224573998 3'utr WDR26 Ensembl G1766.1 TTTTACTTTAATTTCTCATTCATAATTT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:224573970-224573998 NA NA NA NA NA NA chr1 - 225589626 225589650 3'utr LBR Ensembl G1769.1 TTTTAATTACACATTTTATATATG 8 3 7 90 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr1:225589626-225589650 minimal NA NA NA NA NA chr1 - 225590039 225590064 3'utr LBR Ensembl G1770.1 AACATCAATATTTAAACATTTTTAC 4 3 3 30 0.6 0.176091259 0 0 0 5 1 1 3 chr1:225590039-225590064 minimal NA NA AUUUA UAUU minimal chr1 - 225590538 225590563 3'utr LBR Ensembl G1771.1 TTTTTCTTTAAATCCTTTACTAATT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr1:225590538-225590563 NA NA NA NA NA NA chr1 - 225591118 225591148 coding LBR Ensembl G1772.1 CCTTATTTCTACATAATTTATTTCACCATG 6 5 5 73 0.833333333 0.698970004 0 0 0 6 1 0 5 chr1:225591118-225591148 minimal NA NA AUUUA UAUU minimal chr1 - 225598791 225598823 intron LBR Ensembl G1774.1 CTTTATTTTTATTATATCAGTTTATATTTATG 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr1:225598791-225598823 minimal NA NA AUUUA UAUU minimal chr1 - 225833515 225833551 repeat SINE-MIRb RepeatMasker G1779.1 GTTTGACTCTAGTTTGACATTTACTAAATAATTTAT 18 2 18 153 0.947368421 0.954242509 0.736842105 0.6 0.894736842 2 0 1 18 chr1:225833515-225833551 minimal NA NA AUUUA NA minimal chr1 - 226170504 226170533 3'utr C1orf55 Ensembl G1782.1 TCATACATATTAAATCTACATATTTAAAT 31 7 29 290 0.878787879 0.985276743 0 0.3 0.575757576 14 2 2 29 chr1:226170504-226170533 minimal NA NA AUUUA UAUU minimal chr1 - 226170548 226170572 3'utr C1orf55 Ensembl G1783.1 TACATCCATTTATCATACCTGTCT 6 4 6 43 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:226170548-226170572 minimal NA NA AUUUA NA minimal chr1 - 226170835 226170861 3'utr C1orf55 Ensembl G1784.1 TTTCTTTAAACAACATATACTTGAGA 3 2 3 25 1 0.477121255 0 0 0 3 0 0 3 chr1:226170835-226170861 NA NA NA NA NA NA chr1 - 226170888 226170912 3'utr C1orf55 Ensembl G1785.1 TATACCTCTTTCTATTAATTTACT 17 7 13 182 0.722222222 0.812913357 0 0.142857143 0.333333333 12 4 1 13 chr1:226170888-226170912 minimal NA NA AUUUA UAUU minimal chr1 - 226171985 226172029 3'utr C1orf55 Ensembl G1787.1 CATTACTTTAGTTGCGACTTTACAATTTTATTATGTCGTATTTT 4 3 4 33 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:226171985-226172029 minimal NA NA NA UAUU minimal chr1 - 226172602 226172622 3'utr C1orf55 Ensembl G1789.1 ATAATTTCCTTTTCATTATG 8 5 8 80 1 0.903089987 0 0.4 0.625 3 0 0 8 chr1:226172602-226172622 minimal NA NA NA NA NA chr1 + 45978647 45978668 NoAnnotation G179.1 ACTCTAATAACTTCATTTCCT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr1:45978647-45978668 NA NA NA NA NA NA chr1 - 226172640 226172674 3'utr C1orf55 Ensembl G1790.1 TTATTTATAATGGTCCCTTCTTACCCTTTTAATG 4 3 4 41 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:226172640-226172674 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 226172873 226172894 3'utr C1orf55 Ensembl G1791.1 TAACCCAATTCTAACTATCCC 3 2 3 15 1 0.477121255 0 0 0 3 0 0 3 chr1:226172873-226172894 NA NA NA NA NA NA chr1 - 226418889 226418914 3'utr LIN9 Ensembl G1794.1 CATAAATCTTCTATTCTTAATATTT 9 4 9 98 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr1:226418889-226418914 NA NA NA NA UAUU minimal chr1 - 226419398 226419421 3'utr LIN9 Ensembl G1795.1 ATAACACACTATTTTCATATTTT 5 2 5 48 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr1:226419398-226419421 NA NA NA NA UAUU minimal chr1 - 226420000 226420028 3'utr LIN9 Ensembl G1797.1 CATTATATTTATTTTTCTTTTATTATTC 15 6 14 240 0.875 0.84509804 0 0.166666667 0.375 10 1 1 14 chr1:226420000-226420028 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 226457986 226458014 intron PARP1 Ensembl G1798.1 CTTCATTTTTTATTCTTATATTTATTAT 3 2 3 46 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:226457986-226458014 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 227247583 227247611 intron CDC42BPA Ensembl G1801.1 TCAAATAACTTTTAATTTTAATTTATTA 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:227247583-227247611 minimal NA NA AUUUA UAUU minimal chr1 - 227430255 227430280 intron CDC42BPA Ensembl G1804.1 CTTTAAAAATATTAATCTTTTATTT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:227430255-227430280 minimal NA NA NA UAUU minimal chr1 - 227505158 227505184 5'utr CDC42BPA Ensembl G1806.1 TACTTTTAATTATTATTTTATTTAAA 14 6 13 203 0.866666667 0.812913357 0 0.153846154 0.266666667 11 1 1 13 chr1:227505158-227505184 minimal NA NA AUUUA UAUU minimal chr1 - 228243147 228243171 NoAnnotation G1807.1 CACTATTTATATCCATTTATATCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:228243147-228243171 minimal NA NA AUUUA UAUU minimal chr1 - 228288467 228288489 3'utr C1orf35 Ensembl G1809.1 ACCTCTATTTTTCTTTATATTG 10 4 9 121 0.9 0.954242509 0 0.6 0.8 2 1 0 9 chr1:228288467-228288489 minimal NA NA NA UAUU minimal chr1 - 229397350 229397377 NoAnnotation G1812.1 AATTATCTTTTATTTACTTATTTATTT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr1:229397350-229397377 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 229459510 229459535 3'utr C1orf96 Ensembl G1814.1 CTTTCATTCCCCATAAACTCTTCAC 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:229459510-229459535 NA NA NA NA NA NA chr1 - 229729485 229729514 3'utr TAF5L Ensembl G1817.1 TATTATAATTATAATTATTATTATTATTG 3 2 2 49 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:229729485-229729514 minimal NA NA NA UAUU minimal chr1 - 230972884 230972920 3'utr C1orf198 Ensembl G1819.1 TAACTTAGTCATATTTTATACTTGTAGCCTTTAATA 13 3 13 135 1 1.113943352 0 0.333333333 0.692307692 4 0 0 13 chr1:230972884-230972920 minimal NA NA NA UAUU minimal chr1 - 230972952 230972975 3'utr C1orf198 Ensembl G1820.1 TCTCCCTTTCTTTAATTAACATT 6 2 6 56 1 0.77815125 0 0.5 0.833333333 1 0 0 6 chr1:230972952-230972975 NA NA NA NA NA NA chr1 - 231154753 231154782 3'utr FAM89A Ensembl G1822.1 CCTTAATATATTTATTAAAATACTTTATG 8 5 8 88 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr1:231154753-231154782 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 231465784 231465808 NoAnnotation G1826.1 CTTCATCTATTATTCATTTTAAAG 5 2 4 56 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:231465784-231465808 minimal NA NA NA UAUU minimal chr1 - 231469518 231469546 3'utr EXOC8 Ensembl G1829.1 ATCAACCCCTTTATTTTCTCTTTAGCTG 4 2 4 46 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:231469518-231469546 minimal NA NA NA UAUU minimal chr1 - 231471244 231471272 3'utr EXOC8 Ensembl G1834.1 CTTATATATTATTTATATTTATATTAAG 97 14 87 1336 0.887755102 1.638489257 0 0.512820513 0.806122449 19 10 1 87 chr1:231471244-231471272 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 233332092 233332115 intron PCNXL2 Ensembl G1838.1 TCCAATTTATCTAATATTTATTT 4 3 3 47 0.75 0.477121255 0 0 0 4 1 0 3 chr1:233332092-233332115 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 - 234527156 234527180 3'utr TARBP1 Ensembl G1843.1 CCTTAAACATATTACTATATATTT 7 3 5 66 0.714285714 0.698970004 0 0.75 0.857142857 1 2 0 5 chr1:234527156-234527180 NA NA NA NA UAUU minimal chr1 + 51437719 51437739 intron CDKN2C Ensembl G186.1 AATTTTCTTCTACAATTATG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr1:51437719-51437739 minimal NA NA NA NA NA chr1 - 235612343 235612367 3'utr B3GALNT2 Ensembl G1862.1 TTTCTTTCTATTTAATATTTAAAT 4 2 4 50 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:235612343-235612367 minimal NA NA AUUUA UAUU minimal chr1 - 236381503 236381529 3'utr ERO1LB Ensembl G1869.1 TTTTTATTCTATTATCCTTTATTTCC 4 3 4 61 1 0.602059991 0 0 0 4 0 0 4 chr1:236381503-236381529 minimal NA NA NA UAUU minimal chr1 + 51479046 51479070 repeat DNA-MER33 RepeatMasker G187.1 TAAAATATCTCATAACAATTTTTT 8 3 4 78 0.5 0.602059991 0 0.142857143 0.25 6 4 0 4 chr1:51479046-51479070 NA NA NA NA NA NA chr1 - 236723575 236723600 intron HEATR1 Ensembl G1870.1 TTCATTTCTATTAATATTTCTCTTT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr1:236723575-236723600 NA NA NA NA UAUU minimal chr1 - 243287806 243287831 3'utr CEP170 Ensembl G1881.1 AATACATTATCCTCCTTATTTATTT 13 6 9 139 0.692307692 0.954242509 0 0.181818182 0.307692308 9 4 0 9 chr1:243287806-243287831 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 243289563 243289591 3'utr CEP170 Ensembl G1882.1 TATATCAATCCTTTCAAACTATTTAGAT 4 2 3 33 1 0.602059991 0 0 0 4 0 0 4 chr1:243289563-243289591 minimal NA NA AUUUA UAUU minimal chr1 - 243744841 243744865 intron AKT3 Ensembl G1888.1 TTATTATATATTTTTTTCTCCTTT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr1:243744841-243744865 minimal NA NA NA UAUU minimal chr1 - 243881243 243881268 intron AKT3 Ensembl G1889.1 ATTCTAACTTATAATTTATTTTAAA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:243881243-243881268 minimal NA NA AUUUA UAUU minimal chr1 - 243884008 243884032 intron AKT3 Ensembl G1890.1 ATTAACCCTTAATATTTATCTACT 4 2 3 37 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:243884008-243884032 minimal NA NA AUUUA UAUU minimal chr1 - 243924200 243924228 repeat DNA-MER82 RepeatMasker G1891.1 ACATCTTATTTAATATTATTTATTAATT 6 6 6 82 1 0.77815125 0 0 0 6 0 0 6 chr1:243924200-243924228 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 244583062 244583086 intron ADSS Ensembl G1896.1 CCTATTTATATAAATTAACTCCCT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:244583062-244583086 minimal NA NA AUUUA UAUU minimal chr1 + 9664291 9664314 3'utr TMEM201 Ensembl G19.1 TATTTAAATTAGATTATTTATAA 18 3 18 198 1 1.255272505 0 0.666666667 0.888888889 2 0 0 18 chr1:9664291-9664314 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 51738446 51738469 3'utr RNF11 Ensembl G190.1 TTTCTTATTATTATTTTATATTG 5 3 5 74 1 0.698970004 1 0.25 0.4 3 0 0 5 chr1:51738446-51738469 minimal NA NA NA UAUU minimal chr1 - 247470318 247470345 intron ZNF496 Ensembl G1906.1 TATTCATTTATCCTTATTTATTTATTT 4 3 3 60 0.75 0.477121255 0 0 0 4 1 0 3 chr1:247470318-247470345 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 52184102 52184123 repeat LINE-L1MA3 RepeatMasker G191.1 CCTATATCAAAATATTTATAC 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr1:52184102-52184123 minimal NA NA AUUUA UAUU minimal chr10 + 1063541 1063563 3'utr GTPBP4 Ensembl G1910.1 CTCTTAAATTATTTTCTAGTCT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:1063541-1063563 minimal NA NA NA UAUU minimal chr10 + 5499197 5499221 3'utr NET1 Ensembl G1913.1 TATTTTTTAATCAAACAAAATATT 6 3 4 59 0.444444444 0 0.444444444 0.125 0.222222222 7 2 3 4 chr10:5499197-5499221 NA NA NA NA UAUU minimal chr10 + 5499573 5499593 3'utr NET1 Ensembl G1914.1 TAAAGTAGTTTTTAGCATTT 6 5 6 54 1 0.77815125 0.5 0.2 0.333333333 4 0 0 6 chr10:5499573-5499593 NA NA NA NA NA NA chr10 + 5728801 5728838 intron C10orf18 Ensembl G1916.1 TAACTATTACTGTAGCATTTTAATTATCATAGTTTTA 7 4 6 70 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr10:5728801-5728838 minimal NA NA NA UAUU minimal chr10 + 5732065 5732090 intron C10orf18 Ensembl G1917.1 CTTTCAATATTTAATTTTTTCCTTT 4 3 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:5732065-5732090 minimal NA NA AUUUA UAUU minimal chr1 + 52202751 52202774 intron OSBPL9 Ensembl G192.1 CCACTTTTCATTATTTTATTTAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr1:52202751-52202774 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 6157739 6157760 3'utr RBM17 Ensembl G1925.1 TTTCTCTTTTTTATTATTACT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr10:6157739-6157760 minimal NA NA NA UAUU minimal chr10 + 6157872 6157896 3'utr RBM17 Ensembl G1926.1 ACATGGGGTTATATTAAATTATTC 6 4 4 54 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 chr10:6157872-6157896 minimal NA NA NA UAUU minimal chr10 + 6277254 6277274 3'utr PFKFB3 Ensembl G1927.1 CTATTTATTTATTTAATATG 6 2 6 66 1 0.77815125 1 1 1 0 0 0 6 chr10:6277254-6277274 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 6726908 6726932 NoAnnotation G1929.1 TTCAATTTCTATTTTTATTTTTTT 10 2 2 161 0.2 0.301029996 0 0.111111111 0.2 8 8 0 2 chr10:6726908-6726932 minimal NA NA NA UAUU minimal chr10 + 8057970 8057991 3'utr TAF3 Ensembl G1935.1 TATCACAAAACTTTATTATAT 7 2 6 49 0.75 0.477121255 0 0.2 0.5 4 1 1 6 chr10:8057970-8057991 minimal NA NA NA UAUU minimal chr10 + 12206864 12206893 3'utr SEC61A2 Ensembl G1940.1 AACATTTATATCTAATCTATATTTTAGAT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr10:12206864-12206893 minimal NA NA AUUUA UAUU minimal chr10 + 13252827 13252861 3'utr MCM10 Ensembl G1945.1 CTCATTTAGGGTAGATTTATTTATCTCATTAACT 19 5 16 210 0.842105263 1.204119983 0 0.214285714 0.421052632 11 3 0 16 chr10:13252827-13252861 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 52254008 52254030 3'utr OSBPL9 Ensembl G195.1 TCTTACCTACAATAACTTTTAT 4 2 3 34 0.75 0.477121255 0 0 0 4 1 0 3 chr1:52254008-52254030 minimal NA NA NA NA NA chr10 + 14890738 14890762 repeat Low_complexity-AT_rich RepeatMasker G1950.1 CATTTTTATTAAAAATTATTTATT 4 4 4 52 1 0.602059991 0 0 0 4 0 0 4 chr10:14890738-14890762 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 16553813 16553843 3'utr PTER Ensembl G1954.1 TAATTTTATACTGTCCACCTATCTATATAT 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:16553813-16553843 minimal NA NA NA NA NA chr10 + 18966281 18966309 repeat Low_complexity-AT_rich RepeatMasker G1967.1 CTATTTAATTTTTAAAATACAATTTATT 5 3 5 60 0.833333333 0.397940009 0.166666667 0.2 0.333333333 4 0 1 5 chr10:18966281-18966309 minimal NA NA AUUUA UAUU minimal chr10 + 18967173 18967193 3'utr ARL5B Ensembl G1968.1 TATCAATACTTTTATTCTAT 7 3 6 71 1 0.84509804 0.142857143 0.75 0.857142857 1 0 0 7 chr10:18967173-18967193 minimal NA NA NA UAUU minimal chr1 + 52555174 52555196 repeat Low_complexity-AT_rich RepeatMasker G197.1 AATTAAATCTTTTTTTATATTT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr1:52555174-52555196 minimal NA NA NA UAUU minimal chr10 + 18969573 18969593 3'utr ARL5B Ensembl G1971.1 TTACAAAAACTTTTATTTAT 6 4 6 54 1 0.77815125 0.833333333 0.2 0.333333333 4 0 0 6 chr10:18969573-18969593 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 22606931 22606956 intron COMMD3 Ensembl G1982.1 ATTTATTTAAATATCCATTTATTTT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr10:22606931-22606956 minimal NA NA AUUUA UAUU minimal chr10 + 22619384 22619411 3'utr BMI1 Ensembl G1983.1 CACATCTTTCTATACTTTATATACTTT 4 3 4 44 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr10:22619384-22619411 minimal NA NA NA NA NA chr10 + 22619542 22619570 3'utr BMI1 Ensembl G1984.1 ATCACTATAATTCTAAAACAATTTTTTA 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr10:22619542-22619570 NA NA NA NA NA NA chr10 + 23730947 23730972 3'utr OTUD1 Ensembl G1987.1 CCACTTTAACTACTTTTAGTCATAT 11 3 11 96 0.916666667 0.740362689 0 0.428571429 0.666666667 4 0 1 11 chr10:23730947-23730972 NA NA NA NA NA NA chr1 + 52576905 52576929 NoAnnotation G199.1 CTCATTCCTTTTTTTTAAATTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:52576905-52576929 minimal NA NA NA UAUU minimal chr10 + 27464063 27464088 intron MASTL Ensembl G1993.1 CAACTTATCATCTCACTATTTAACT 4 2 4 36 1 0.602059991 0.5 1 1 0 0 0 4 chr10:27464063-27464088 minimal NA NA AUUUA UAUU minimal chr10 + 27475513 27475534 3'utr MASTL Ensembl G1994.1 CATAATTATATACTCCTTAAT 7 2 7 56 0.875 0.544068044 0.125 0.25 0.625 3 0 1 7 chr10:27475513-27475534 minimal NA NA NA NA NA chr10 + 27870937 27870959 NoAnnotation G1998.1 TACCACATTTTTAAAATCTATT 3 2 3 27 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr10:27870937-27870959 NA NA NA NA UAUU minimal chr10 + 28823278 28823305 intron WAC Ensembl G1999.1 ACTTACGAGGCTTATTTATTTATTTAT 11 7 10 126 0.833333333 0.698970004 0 0.2 0.333333333 8 1 1 10 chr10:28823278-28823305 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 900681 900705 repeat Simple_repeat-(TTTA)n RepeatMasker G2.1 TCTTTATTTAGTTGTTTATTTATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr1:900681-900705 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 10132897 10132924 repeat Low_complexity-AT_rich RepeatMasker G20.1 TCATATAATAATAATTACTATTTTATA 5 2 3 51 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr1:10132897-10132924 minimal NA NA NA UAUU minimal chr10 + 31720612 31720636 intron ZEB1 Ensembl G2009.1 ATAAATTTAATCATTTTATTATTT 2 2 2 26 1 0.301029996 0.5 0 0 2 0 0 2 chr10:31720612-31720636 minimal NA NA AUUUA UAUU minimal chr10 + 31817569 31817596 3'utr ZEB1 Ensembl G2013.1 TCTTATTTTTATATTTCTTTATTTATT 21 8 12 382 0.571428571 1.079181246 0 0.333333333 0.523809524 10 9 0 12 chr10:31817569-31817596 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 31817609 31817654 3'utr ZEB1 Ensembl G2014.1 TATAATACTGTAGTTTGTATTAATACAATAATATATTTTAGTATG 23 5 23 252 1 1.361727836 0.086956522 0.454545455 0.739130435 6 0 0 23 chr10:31817609-31817654 NA NA NA NA UAUU minimal chr10 + 43679907 43679933 3'utr CSGALNACT2 Ensembl G2027.1 TATTTACTATCCTTTTTCTAATATAT 7 5 7 87 1 0.84509804 0 0 0 7 0 0 7 chr10:43679907-43679933 minimal NA NA AUUUA UAUU minimal chr10 + 43680498 43680530 repeat Low_complexity-AT_rich RepeatMasker G2028.1 TCTCCTTTTATATATTATTATAATTATTTATT 8 3 6 106 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr10:43680498-43680530 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 53292463 53292483 3'utr ZYG11B Ensembl G203.1 AATCATCAATCTATTTTATT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:53292463-53292483 minimal NA NA NA UAUU minimal chr10 + 51590631 51590654 3'utr NCOA4 Ensembl G2033.1 TCAAAATATAATTTACATTAATC 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr10:51590631-51590654 minimal NA NA AUUUA NA minimal chr10 + 52505596 52505619 repeat Low_complexity-AT_rich RepeatMasker G2035.1 CTTTTTAAAAATTTTTATTTAAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr10:52505596-52505619 minimal NA NA AUUUA UAUU minimal chr10 + 60155476 60155507 3'utr TFAM Ensembl G2052.1 AATAAAATTTTTAATCTTTAATTTTACATTT 14 8 11 165 0.785714286 1.041392685 0 0.083333333 0.214285714 11 3 0 11 chr10:60155476-60155507 NA NA NA NA NA NA chr10 + 62545552 62545578 intron CDK1 Ensembl G2055.1 CTTAACTAATTTTATTAATATTTATG 38 9 35 462 0.897435897 1.243038049 0.307692308 0.384615385 0.58974359 16 3 1 35 chr10:62545552-62545578 minimal NA NA AUUUA UAUU minimal chr10 + 62548878 62548898 intron CDK1 Ensembl G2056.1 CATTATTATACATATTTATG 5 2 4 46 0.8 0.602059991 1 0.333333333 0.6 2 1 0 4 chr10:62548878-62548898 minimal NA NA AUUUA UAUU minimal chr10 + 62553851 62553874 repeat Low_complexity-AT_rich RepeatMasker G2057.1 TCTTCTAATTTCAAAAATATAAC 5 2 3 41 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr10:62553851-62553874 NA NA NA NA NA NA chr10 + 62553951 62553975 3'utr CDK1 Ensembl G2058.1 TTACTATAATAAAACTATAATATT 18 5 11 161 0.611111111 1.041392685 0.611111111 0.666666667 0.833333333 3 7 0 11 chr10:62553951-62553975 NA NA NA NA UAUU minimal chr10 + 62555229 62555259 repeat Low_complexity-AT_rich RepeatMasker G2060.1 TATCCTATATAATTATTTACTTATTTATTT 19 8 15 254 0.8 0.903089987 0.05 0.25 0.4 12 3 1 16 chr10:62555229-62555259 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 62567771 62567796 repeat DNA-Charlie7a RepeatMasker G2064.1 TATCCTTTTAATATTTCTATTATTG 12 6 12 152 1 1.079181246 0.083333333 0.2 0.333333333 8 0 0 12 chr10:62567771-62567796 minimal NA NA NA UAUU minimal chr10 + 62572476 62572509 NoAnnotation G2066.1 CATTATAATTTATTTAACCAATATTCTCTTTAT 12 6 10 145 0.833333333 1 0 0.111111111 0.333333333 8 2 0 10 chr10:62572476-62572509 minimal NA NA AUUUA UAUU minimal chr10 + 63853307 63853329 3'utr ARID5B Ensembl G2070.1 TTAAATTGACTGTATATATTTG 5 2 5 48 1 0.698970004 0.4 0.25 0.4 3 0 0 5 chr10:63853307-63853329 NA NA NA NA UAUU minimal chr10 + 63853329 63853350 3'utr ARID5B Ensembl G2071.1 CTTCTTAAAACTACCTGTATC 7 3 5 47 0.6 0.176091259 0.1 0.25 0.4 6 1 3 6 chr10:63853329-63853350 NA NA NA NA NA NA chr10 + 63854829 63854850 3'utr ARID5B Ensembl G2073.1 CTTCAATTAATTATTTACCTT 5 3 4 51 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr10:63854829-63854850 minimal NA NA AUUUA UAUU minimal chr10 + 64566031 64566060 3'utr ADO Ensembl G2075.1 CCTTTTTTTCTTATAGTTTTTTAACTTAT 3 2 2 43 0.5 0 0.25 0 0 4 1 1 2 chr10:64566031-64566060 minimal NA NA NA NA NA chr10 + 64566577 64566613 3'utr ADO Ensembl G2076.1 CATTCCCTATATTTATTTACTTCCAATATTTTACTG 77 11 67 881 0.858974359 1.525044807 0.025641026 0.26 0.525641026 37 10 1 67 chr10:64566577-64566613 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 64567008 64567032 3'utr ADO Ensembl G2077.1 TTTCTCCCTTTTTACTATTTATAG 17 7 16 215 0.941176471 1.204119983 0.117647059 0.214285714 0.352941176 11 1 0 16 chr10:64567008-64567032 minimal NA NA AUUUA UAUU minimal chr10 + 67437361 67437381 lincRNA RP11-222A11.1 Ensembl G2086.1 CAATATTTATACTTTAATTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr10:67437361-67437381 minimal NA NA AUUUA UAUU minimal chr10 + 69676498 69676522 3'utr SIRT1 Ensembl G2088.1 ATAATTTTTAACTTCATTATTTCT 7 4 7 82 1 0.84509804 0.142857143 0.25 0.571428571 3 0 0 7 chr10:69676498-69676522 minimal NA NA NA UAUU minimal chr10 + 69677519 69677549 3'utr SIRT1 Ensembl G2090.1 AAACTAGTTCTTATAATTTATCTTTATTTA 26 7 22 329 0.846153846 1.342422681 0 0.333333333 0.615384615 10 4 0 22 chr10:69677519-69677549 minimal NA NA AUUUA UAUU minimal chr10 + 70095600 70095626 intron HNRNPH3 Ensembl G2091.1 ACCCAGAACATTCATAATATTTATTT 5 3 3 47 0.6 0.477121255 0.2 0.25 0.4 3 2 0 3 chr10:70095600-70095626 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 70102293 70102329 3'utr HNRNPH3 Ensembl G2093.1 TATAAATTCAGCTAATTATTTCTATATTATTATTTT 40 7 29 488 0.725 1.462397998 0 0.45 0.725 11 11 0 29 chr10:70102293-70102329 minimal NA NA NA UAUU minimal chr1 + 57174780 57174801 3'utr PRKAA2 Ensembl G210.1 TAATTAACACTTATTTACCTG 2 2 2 16 1 0.301029996 0.5 0 0 2 0 0 2 chr1:57174780-57174801 minimal NA NA AUUUA UAUU minimal chr10 + 70551312 70551341 3'utr CCAR1 Ensembl G2101.1 ACTGTAGTATTTAATTACCAAATTTCTTT 8 3 7 79 0.875 0.84509804 0 0.333333333 0.5 4 1 0 7 chr10:70551312-70551341 minimal NA NA AUUUA UAUU minimal chr10 + 70725439 70725469 intron DDX21 Ensembl G2105.1 TCTTAGGACTTTTATCTATTTATATTTATC 6 4 5 78 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr10:70725439-70725469 minimal NA NA AUUUA UAUU minimal chr10 + 70742712 70742734 3'utr DDX21 Ensembl G2106.1 CTTCATTTAAATTATTTCATCT 6 3 3 69 0.5 0.477121255 0.666666667 0.2 0.333333333 4 3 0 3 chr10:70742712-70742734 minimal NA NA AUUUA UAUU minimal chr10 + 70742735 70742759 3'utr DDX21 Ensembl G2107.1 ATCATTATCATTTATAACTTTATT 14 4 14 152 1 1.146128036 0.357142857 0.555555556 0.714285714 4 0 0 14 chr10:70742735-70742759 minimal NA NA AUUUA UAUU minimal chr10 + 70742787 70742821 3'utr DDX21 Ensembl G2108.1 AAAGGTGTATGAATTCATTACATTTTTATTCTAA 13 6 8 137 0.923076923 1.079181246 0.461538462 0.222222222 0.461538462 7 1 0 12 chr10:70742787-70742821 minimal NA NA NA UAUU minimal chr1 + 57178182 57178202 3'utr PRKAA2 Ensembl G211.1 ATTCTTCTTATAATTTTATG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr1:57178182-57178202 minimal NA NA NA NA NA chr10 + 70743184 70743207 3'utr DDX21 Ensembl G2110.1 ATACATTTTTAGCTTCTCATTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr10:70743184-70743207 minimal NA NA NA NA NA chr10 + 70744664 70744685 3'utr DDX21 Ensembl G2112.1 TTATAATTTTTACTATTTTCT 9 3 6 117 0.666666667 0.77815125 0.111111111 0.333333333 0.555555556 4 3 0 6 chr10:70744664-70744685 minimal NA NA NA UAUU minimal chr10 + 70959582 70959603 intron SUPV3L1 Ensembl G2120.1 CCTAAATATTATTTATTTATG 3 3 3 30 1 0.477121255 1 0 0 3 0 0 3 chr10:70959582-70959603 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 72640811 72640834 3'utr SGPL1 Ensembl G2125.1 TTTTAATTACCTTATTTTCTTTT 3 2 3 45 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr10:72640811-72640834 minimal NA NA NA UAUU minimal chr10 + 72640852 72640878 3'utr SGPL1 Ensembl G2126.1 TAATCTTTTCTCTTCTTAATATCCTT 6 4 6 72 0.75 0.301029996 0 0.142857143 0.25 6 0 2 6 chr10:72640852-72640878 NA NA NA NA NA NA chr10 + 74035219 74035240 3'utr DDIT4 Ensembl G2128.1 TACCTTATTATTTTTGTTACT 3 2 3 36 0.75 0.176091259 0.5 0 0 4 0 1 3 chr10:74035219-74035240 minimal NA NA NA UAUU minimal chr10 + 74035753 74035781 3'utr DDIT4 Ensembl G2129.1 CAATATTTTTTACTTTTCTAATAAACAT 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr10:74035753-74035781 NA NA NA NA UAUU minimal chr1 + 57323157 57323180 intron C8A Ensembl G213.1 AATCTTTTTCTATTATTTTATTT 3 2 2 46 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:57323157-57323180 minimal NA NA NA UAUU minimal chr10 + 74646335 74646356 3'utr MCU Ensembl G2132.1 CCCTCCTTTATATACTTATCT 4 3 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:74646335-74646356 minimal NA NA NA NA NA chr10 + 75013439 75013461 lincRNA RP11-152N13.5 Ensembl G2134.1 CAATTACACTATAGTTATTTAT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:75013439-75013461 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 76468607 76468630 3'utr ADK Ensembl G2144.1 CTTTTTATACAAATATATTTAAT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:76468607-76468630 minimal NA NA AUUUA UAUU minimal chr10 + 76472894 76472915 NoAnnotation G2145.1 TATTTTCACTTTATTAATTCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr10:76472894-76472915 minimal NA NA NA UAUU minimal chr10 + 76940740 76940766 3'utr SAMD8 Ensembl G2149.1 TTTTAAACTCTCTAATTTAATAAATG 5 4 4 46 0.8 0.602059991 0.4 0 0 5 1 0 4 chr10:76940740-76940766 minimal NA NA AUUUA NA minimal chr10 + 76941799 76941827 3'utr SAMD8 Ensembl G2151.1 ATTTAACTAATATATATTATTTTATATC 18 7 17 212 0.944444444 1.230448921 0 0.307692308 0.5 9 1 0 17 chr10:76941799-76941827 minimal NA NA AUUUA UAUU minimal chr10 + 81076087 81076114 3'utr ZMIZ1 Ensembl G2155.1 ACAACCTCTAATATTTATCTAATAAAT 10 3 10 75 1 1 0 0.2 0.6 4 0 0 10 chr10:81076087-81076114 minimal NA NA AUUUA UAUU minimal chr1 + 60339792 60339812 3'utr HOOK1 Ensembl G216.1 ACAATTTAAATTTAATTAAT 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr1:60339792-60339812 minimal NA NA AUUUA NA minimal chr10 + 86135565 86135586 intron FAM190B Ensembl G2162.1 CCATCTTATTATTTTTATTTA 4 2 2 50 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr10:86135565-86135586 minimal NA NA AUUUA UAUU minimal chr10 + 86276478 86276498 3'utr FAM190B Ensembl G2164.1 TATTTACTCCATTTTTCTCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:86276478-86276498 minimal NA NA AUUUA UAUU minimal chr10 + 89313010 89313033 3'utr MINPP1 Ensembl G2168.1 ATTTTTATATTTTCCTATTATAT 6 5 6 83 0.857142857 0.477121255 0.714285714 0 0 7 0 1 6 chr10:89313010-89313033 minimal NA NA NA UAUU minimal chr1 + 60511007 60511027 repeat DNA-Kanga2_a RepeatMasker G217.1 TATTTCCAAATTAATATTAT 6 2 2 58 0.285714286 0 0 0.25 0.571428571 3 4 1 2 chr1:60511007-60511027 minimal NA NA NA UAUU minimal chr10 + 89629496 89629518 intron PTEN Ensembl G2170.1 CAAACCTTTTATCTTAATATTT 7 4 5 69 0.555555556 0.22184875 0 0.125 0.222222222 7 2 2 5 chr10:89629496-89629518 minimal NA NA NA UAUU minimal chr10 + 89671077 89671099 intron PTEN Ensembl G2172.1 TTATTTCTCCATTTAATCTATA 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr10:89671077-89671099 minimal NA NA AUUUA UAUU minimal chr10 + 89727720 89727743 3'utr PTEN Ensembl G2175.1 TCCTAATTAAAACTTTATTTATG 6 3 6 58 1 0.77815125 0.5 0.2 0.333333333 4 0 0 6 chr10:89727720-89727743 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 91548616 91548640 NoAnnotation G2185.1 TCTTTTATTTATTCTATCTATTTC 2 2 2 30 1 0.301029996 0.5 0 0 2 0 0 2 chr10:91548616-91548640 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 + 92659721 92659743 intron RPP30 Ensembl G2188.1 CATTTAATAATTTCTATTTATT 4 3 3 49 0.6 0.176091259 0 0 0 5 1 1 3 chr10:92659721-92659743 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 93710890 93710913 repeat Low_complexity-AT_rich RepeatMasker G2194.1 AATCTTATTATTTTATATATATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr10:93710890-93710913 minimal NA NA NA UAUU minimal chr10 + 93789336 93789382 3'utr BTAF1 Ensembl G2196.1 CTACCATAACATCCTATTTAGAGGGTGGTTTTTTTTAATTTATCTA 6 3 5 56 1 0.77815125 0.833333333 0.25 0.5 3 0 0 6 chr10:93789336-93789382 minimal NA NA AUUUA UAUU minimal chr10 + 94109603 94109623 intron MARCH5 Ensembl G2197.1 CTTTAACATTACTTATATTA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:94109603-94109623 minimal NA NA NA UAUU minimal chr10 + 94112298 94112322 3'utr MARCH5 Ensembl G2198.1 ATATTTTCAAAACCCTATTTATTT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:94112298-94112322 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 94743712 94743733 intron EXOC6 Ensembl G2202.1 CTATACTATTATTTTTATCTT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr10:94743712-94743733 minimal NA NA NA UAUU minimal chr10 + 95266761 95266783 coding CEP55 Ensembl G2205.1 CTTCAACTCATCAATAAATAAT 3 2 2 19 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:95266761-95266783 NA NA NA NA NA NA chr10 + 96364451 96364472 NoAnnotation G2213.1 CTCAATAATTACTTTTATTAT 7 3 7 68 1 0.84509804 0.285714286 0.4 0.571428571 3 0 0 7 chr10:96364451-96364472 minimal NA NA NA UAUU minimal chr10 + 96367894 96367920 NoAnnotation G2214.1 AATTTCTATTTAAATTAGTCTAGAAT 34 2 33 340 0.970588235 1.51851394 0.058823529 0.555555556 0.882352941 4 1 0 33 chr10:96367894-96367920 minimal NA NA AUUUA UAUU minimal chr10 + 96372829 96372851 NoAnnotation G2216.1 TATCCACCACATTTAACTTATT 3 2 2 20 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr10:96372829-96372851 minimal NA NA AUUUA UAUU minimal chr10 + 97928771 97928797 NoAnnotation G2220.1 TATTATTACTAACTTATCTATTTATT 4 3 3 52 0.75 0.477121255 0 0 0 4 1 0 3 chr10:97928771-97928797 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 98718711 98718732 3'utr LCOR Ensembl G2225.1 ATATATATTTTACCTTATTAT 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr10:98718711-98718732 minimal NA NA NA UAUU minimal chr10 + 98719114 98719137 3'utr LCOR Ensembl G2226.1 ATAACATTACTTAAATTATTAAT 8 5 8 67 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr10:98719114-98719137 minimal NA NA NA UAUU minimal chr10 + 98719477 98719499 3'utr LCOR Ensembl G2227.1 TATAATACTTTTTAATATTAAG 3 3 3 29 1 0.477121255 1 0 0 3 0 0 3 chr10:98719477-98719499 NA NA NA NA UAUU minimal chr10 + 98721109 98721134 repeat Low_complexity-AT_rich RepeatMasker G2228.1 CAAATATTATTATAATATTTAATCT 7 6 6 71 0.857142857 0.77815125 0 0 0 7 1 0 6 chr10:98721109-98721134 minimal NA NA AUUUA UAUU minimal chr1 + 61923285 61923310 repeat Low_complexity-AT_rich RepeatMasker G223.1 CAATTATTAATTTTTCTTTTATTTT 7 3 5 108 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr1:61923285-61923310 minimal NA NA NA UAUU minimal chr10 + 98723744 98723765 3'utr LCOR Ensembl G2232.1 TATAATTTAATATTTCTCTTG 2 2 2 21 1 0.301029996 1 0 0 2 0 0 2 chr10:98723744-98723765 minimal NA NA AUUUA UAUU minimal chr10 + 98723892 98723913 3'utr LCOR Ensembl G2234.1 CACTACATTAAATTTTTTAAT 3 3 3 27 1 0.477121255 0.666666667 0 0 3 0 0 3 chr10:98723892-98723913 NA NA NA NA NA NA chr10 + 98747340 98747360 NoAnnotation G2237.1 ATCATCTTTAAAATCAACTT 3 2 3 21 1 0.477121255 0 0 0 3 0 0 3 chr10:98747340-98747360 NA NA NA NA NA NA chr10 + 98749230 98749251 NoAnnotation G2238.1 TTTATTCTTATATAATATTTT 3 2 3 39 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr10:98749230-98749251 minimal NA NA NA UAUU minimal chr10 + 98749270 98749292 NoAnnotation G2239.1 CCACATACTTTCAAAATAATTT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr10:98749270-98749292 NA NA NA NA NA NA chr10 + 98751981 98752005 NoAnnotation G2240.1 TTTCAAATACATATATATAATATT 4 2 3 41 0.6 0.176091259 0 0.25 0.4 3 1 1 3 chr10:98751981-98752005 NA NA NA NA UAUU minimal chr10 + 98754263 98754283 NoAnnotation G2241.1 TCTTCTCTTTTGTATTTATG 4 2 4 48 1 0.602059991 1 1 1 0 0 0 4 chr10:98754263-98754283 minimal NA NA AUUUA UAUU minimal chr10 + 101517297 101517321 repeat Low_complexity-AT_rich RepeatMasker G2249.1 AATTATTTATATTAAATATTTATT 4 3 4 52 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:101517297-101517321 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 102723353 102723381 3'utr FAM178A Ensembl G2258.1 TAATTTAATCCTTTGTAGATACATTATT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr10:102723353-102723381 minimal NA NA AUUUA UAUU minimal chr10 + 103922327 103922356 3'utr NOLC1 Ensembl G2261.1 TATATTTTATATTAAATCACTTACTATTG 19 5 14 229 0.736842105 1.146128036 0.263157895 0.153846154 0.421052632 11 5 0 14 chr10:103922327-103922356 minimal NA NA NA UAUU minimal chr10 + 104013663 104013684 intron GBF1 Ensembl G2262.1 CTAATAATCTTTTCATATATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr10:104013663-104013684 NA NA NA NA UAUU minimal chr10 + 105049222 105049247 3'utr INA Ensembl G2268.1 CTTACACAAATCTATTTAATTAGGA 44 5 41 355 0.911111111 1.311753861 0.8 0.454545455 0.866666667 6 3 1 41 chr10:105049222-105049247 minimal NA NA AUUUA UAUU minimal chr10 + 105148257 105148281 3'utr TAF5 Ensembl G2271.1 CTATTTTAATTTATTACATTTAGA 21 2 20 253 0.952380952 1.301029996 0.047619048 0.6 0.904761905 2 1 0 20 chr10:105148257-105148281 minimal NA NA AUUUA UAUU minimal chr1 + 62907885 62907924 coding USP1 Ensembl G228.1 TTTTAAATCTGGAGTAAAGCACTTATTTAATATTATTTC 5 4 4 51 0.8 0.602059991 0.6 0 0 5 1 0 4 chr1:62907885-62907924 minimal NA NA AUUUA UAUU minimal chr10 + 112771933 112771955 3'utr SHOC2 Ensembl G2286.1 CAACTTTTCATATATATTTTCC 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:112771933-112771955 NA NA NA NA UAUU minimal chr10 + 112772002 112772024 3'utr SHOC2 Ensembl G2287.1 AATTTTTCTTTAACTTATTTTG 5 2 4 65 0.8 0.602059991 0.6 0.25 0.4 3 1 0 4 chr10:112772002-112772024 minimal NA NA NA UAUU minimal chr10 + 114325191 114325216 repeat Low_complexity-AT_rich RepeatMasker G2291.1 ACTTATTTATACATTTTATTTATAT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr10:114325191-114325216 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 114466786 114466814 intron VTI1A Ensembl G2292.1 TTTAAAAACTATTACTTTCATATTTATT 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:114466786-114466814 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 115641051 115641071 intron NHLRC2 Ensembl G2299.1 CTCCATTTCAAATATTTATG 3 3 3 24 1 0.477121255 1 0 0 3 0 0 3 chr10:115641051-115641071 minimal NA NA AUUUA UAUU minimal chr10 + 115668895 115668918 repeat Low_complexity-AT_rich RepeatMasker G2301.1 ATCTATTTTTATTATAAATTATT 5 4 5 64 1 0.698970004 0 0 0 5 0 0 5 chr10:115668895-115668918 minimal NA NA NA UAUU minimal chr10 + 115668920 115668940 repeat Low_complexity-AT_rich RepeatMasker G2302.1 TTATTTAACATACCATTATG 3 2 3 24 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr10:115668920-115668940 minimal NA NA AUUUA UAUU minimal chr10 + 116621908 116621931 repeat Low_complexity-AT_rich RepeatMasker G2303.1 ATTAATATAATATATCTATATTT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:116621908-116621931 NA NA NA NA UAUU minimal chr10 + 116735939 116735969 3'utr TRUB1 Ensembl G2304.1 TCTTCAACTAAAAACTTTATTCTTTAGCAT 6 2 3 53 0.666666667 0.602059991 0.166666667 0 0 6 2 0 4 chr10:116735939-116735969 minimal NA NA NA UAUU minimal chr10 + 116736952 116736996 3'utr TRUB1 Ensembl G2305.1 TACCTCTACCATCTTAATGTAGTAACTTTAGAATTTAAATTTTT 5 4 5 51 1 0.698970004 0 0 0 5 0 0 5 chr10:116736952-116736996 minimal NA NA AUUUA NA minimal chr10 + 116737101 116737130 3'utr TRUB1 Ensembl G2306.1 ATTATTTTAATTATATTACTTTATACTCT 9 4 8 119 0.8 0.602059991 0 0.25 0.4 6 1 1 8 chr10:116737101-116737130 minimal NA NA NA UAUU minimal chr10 + 116738492 116738521 NoAnnotation G2307.1 TCCTAATTCTTCATTAAATACTATTTATT 6 3 5 80 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr10:116738492-116738521 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 62916981 62917001 3'utr USP1 Ensembl G231.1 TATTCTCCATATTTTGGAGT 19 7 18 172 0.947368421 1.255272505 0 0.625 0.842105263 3 1 0 18 chr1:62916981-62917001 NA NA NA NA UAUU minimal chr10 + 122638083 122638109 intron WDR11 Ensembl G2317.1 CTTATATATTTATTCTTTTATTCTCT 4 3 4 61 0.8 0.301029996 0 0 0 5 0 1 4 chr10:122638083-122638109 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 + 122641152 122641177 intron WDR11 Ensembl G2318.1 ACATTTTTAAATTTCAATTATTTAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr10:122641152-122641177 UUAUUUAU NA NA AUUUA UAUU minimal chr10 + 123711559 123711579 NoAnnotation G2320.1 CATACTTTTAATCATTAATG 4 2 4 32 1 0.602059991 1 0.5 0.75 1 0 0 4 chr10:123711559-123711579 NA NA NA NA NA NA chr10 + 124924363 124924384 3'utr BUB3 Ensembl G2326.1 TCAAACTTTAAAATTTATATT 6 4 6 53 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr10:124924363-124924384 minimal NA NA AUUUA UAUU minimal chr10 + 125067861 125067885 repeat Low_complexity-T-rich RepeatMasker G2329.1 TTCTCTATTTATCTAATATTTATG 3 3 3 36 1 0.477121255 0.666666667 0 0 3 0 0 3 chr10:125067861-125067885 minimal NA NA AUUUA UAUU minimal chr10 + 126524214 126524239 repeat Low_complexity-AT_rich RepeatMasker G2332.1 TCATAAAATAAATTAATTATTTTTT 11 7 11 103 1 1.041392685 0 0.222222222 0.363636364 7 0 0 11 chr10:126524214-126524239 minimal NA NA NA UAUU minimal chr10 + 126524573 126524607 3'utr FAM175B Ensembl G2334.1 ACTCTCTTGGGATGCACTTATATTTTTATTTAAT 7 5 7 76 1 0.84509804 0.428571429 0.166666667 0.285714286 5 0 0 7 chr10:126524573-126524607 minimal NA NA AUUUA UAUU minimal chr10 + 126673770 126673790 3'utr ZRANB1 Ensembl G2337.1 TAAAAAAAACTAATTTTATT 3 2 2 22 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:126673770-126673790 minimal NA NA NA UAUU minimal chr10 + 131956119 131956143 repeat Low_complexity-AT_rich RepeatMasker G2348.1 ATCCTTTAAAAATATTTATATATT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:131956119-131956143 minimal NA NA AUUUA UAUU minimal chr1 + 63790550 63790571 3'utr FOXD3 Ensembl G235.1 AAAAAACAAATTCCGTAGATT 3 2 3 12 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr1:63790550-63790571 NA NA NA NA NA NA chr10 + 132037169 132037195 NoAnnotation G2350.1 ATTTATCATCCTTTTTACATAATACT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:132037169-132037195 minimal NA NA AUUUA NA minimal chr10 + 134780454 134780479 lincRNA RP13-137A17.6 Ensembl G2353.1 CTCAGCTAGTTTTTTTATTATTATT 7 2 2 94 0.375 0.176091259 0 0.166666667 0.375 5 4 1 3 chr10:134780454-134780479 minimal NA NA NA UAUU minimal chr10 - 856990 857010 3'utr LARP4B Ensembl G2355.1 CATACTAATCATATCTAATG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:856990-857010 NA NA NA NA NA NA chr10 - 857642 857669 3'utr LARP4B Ensembl G2356.1 TAACCATACACTTTATTCCACAAAATG 3 2 3 19 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:857642-857669 minimal NA NA NA UAUU minimal chr10 - 857710 857730 3'utr LARP4B Ensembl G2357.1 CCTCAAATTTTTCTTTATTC 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:857710-857730 minimal NA NA NA UAUU minimal chr10 - 3819811 3819835 3'utr KLF6 Ensembl G2364.1 AAAACCATAACCTAACTTTTATAG 3 3 3 17 1 0.477121255 0 0 0 3 0 0 3 chr10:3819811-3819835 minimal NA NA NA NA NA chr10 - 3819915 3819940 3'utr KLF6 Ensembl G2365.1 ATAATATATAAATATTTTTTTTAAG 3 2 3 36 1 0.477121255 0 0 0 3 0 0 3 chr10:3819915-3819940 NA NA NA NA UAUU minimal chr10 - 5812112 5812140 intron GDI2 Ensembl G2367.1 ATTTTAACTACTATATTTTATATAAACG 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:5812112-5812140 minimal NA NA NA UAUU minimal chr10 - 5825200 5825228 repeat LINE-L1PBa RepeatMasker G2368.1 CTATTCTTATATTTTTTATTTTATAACT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr10:5825200-5825228 minimal NA NA NA UAUU minimal chr10 - 5895704 5895727 tRNA tRNA-tRNA-Val-GTA RepeatMasker G2369.1 TATCACATCTGCTTTACACGCAG 8 2 2 45 0.181818182 -0.301029996 0.272727273 0.222222222 0.363636364 7 6 3 2 chr10:5895704-5895727 NA NA NA NA NA NA chr10 - 5994402 5994428 3'utr IL15RA Ensembl G2371.1 TCTATTATATCTATACATTATATATT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:5994402-5994428 minimal NA NA NA UAUU minimal chr10 - 7201742 7201764 3'utr SFMBT2 Ensembl G2372.1 AACACCCATTTATATTTATTTC 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr10:7201742-7201764 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 7367313 7367333 repeat LTR-MLT1B RepeatMasker G2377.1 ATTCTCTACCTTTAATATTG 2 2 2 13 1 0.301029996 0 0 0 2 0 0 2 chr10:7367313-7367333 NA NA NA NA UAUU minimal chr10 - 12066001 12066028 intron UPF2 Ensembl G2387.1 CATTTTATTCAATATCTTTTATTATTT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr10:12066001-12066028 minimal NA NA NA UAUU minimal chr10 - 15877375 15877403 intron FAM188A Ensembl G2396.1 TTAATTAATCATCTATTTAATTCTTAGA 5 2 3 60 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr10:15877375-15877403 minimal NA NA AUUUA UAUU minimal chr10 - 15880481 15880511 intron FAM188A Ensembl G2397.1 TTATTTAATCACCCTTCTATATTCTCAGTA 3 2 3 38 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:15880481-15880511 minimal NA NA AUUUA UAUU minimal chr1 + 10364793 10364818 3'utr KIF1B Ensembl G24.1 TTCTTATTATTTACATTATAAATAT 3 2 3 38 1 0.477121255 0 0 0 3 0 0 3 chr1:10364793-10364818 minimal NA NA AUUUA UAUU minimal chr10 - 16205684 16205705 repeat LINE-L1MB4 RepeatMasker G2400.1 TAAATATTTTTCCCTAAATTT 50 6 11 520 0.215686275 0.740362689 0 0.555555556 0.921568627 4 39 1 11 chr10:16205684-16205705 NA NA NA NA UAUU minimal chr10 - 22260226 22260248 intron DNAJC1 Ensembl G2409.1 ATATCTAAATAATTATTTATTT 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:22260226-22260248 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 27434641 27434663 intron YME1L1 Ensembl G2420.1 CATCAATTTATTTTTAAATATT 5 3 5 50 1 0.698970004 0 0.25 0.4 3 0 0 5 chr10:27434641-27434663 minimal NA NA AUUUA UAUU minimal chr10 - 30305822 30305843 3'utr KIAA1462 Ensembl G2426.1 CTACTTTTATTTTATCTTAGA 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr10:30305822-30305843 minimal NA NA NA UAUU minimal chr1 + 65157777 65157799 3'utr CACHD1 Ensembl G243.1 ATTATTTTTCTACTATTTATTG 6 2 3 81 0.5 0.477121255 1 0.666666667 0.833333333 1 3 0 3 chr1:65157777-65157799 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 30628672 30628701 intron MTPAP Ensembl G2431.1 CTAATATTTTTATTACAATTTTAATATCT 5 5 5 65 1 0.698970004 0 0 0 5 0 0 5 chr10:30628672-30628701 minimal NA NA NA UAUU minimal chr10 - 31605604 31605628 lincRNA ZEB1-AS1 Ensembl G2432.1 CCCAAATCTTCTAACATAAAATTT 5 2 5 33 1 0.698970004 0 1 1 0 0 0 5 chr10:31605604-31605628 NA NA NA NA NA NA chr10 - 31605850 31605878 lincRNA ZEB1-AS1 Ensembl G2433.1 CTTAATAAACATTTCTTAAATTAATATT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:31605850-31605878 NA NA NA NA UAUU minimal chr10 - 32298429 32298451 3'utr KIF5B Ensembl G2437.1 TTCTTTTCTATTTATAATTTCA 4 2 4 52 1 0.602059991 0 0.5 0.75 1 0 0 4 chr10:32298429-32298451 minimal NA NA AUUUA UAUU minimal chr10 - 32298868 32298899 3'utr KIF5B Ensembl G2438.1 ATTTAAAATATAAATTTATTTATTTATTTTT 22 7 15 322 0.681818182 1.176091259 0 0.266666667 0.5 11 7 0 15 chr10:32298868-32298899 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 32299340 32299366 3'utr KIF5B Ensembl G2440.1 TACACTAATTTATTTCTTTAGTCTAG 10 4 10 111 1 1 0 0.125 0.3 7 0 0 10 chr10:32299340-32299366 minimal NA NA AUUUA UAUU minimal chr10 - 32634126 32634148 intron EPC1 Ensembl G2443.1 ACACTACCTCTTAATTTATTTT 4 2 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:32634126-32634148 minimal NA NA AUUUA UAUU minimal chr10 - 33127019 33127040 NoAnnotation G2446.1 AACCTATTTATTTTTATTATT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:33127019-33127040 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 38119767 38119789 repeat DNA-MER63B RepeatMasker G2454.1 CACTCATCACTTCCTAATTATT 4 3 4 31 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:38119767-38119789 minimal NA NA NA UAUU minimal chr10 - 43881335 43881356 3'utr HNRNPF Ensembl G2460.1 ATCTCCCTTATATTCTTATGA 9 3 9 81 1 0.954242509 0 0.5 0.777777778 2 0 0 9 chr10:43881335-43881356 minimal NA NA NA UAUU minimal chr10 - 43881658 43881685 3'utr HNRNPF Ensembl G2462.1 TTATATTTTCATTTAAAATCCTTTAGG 4 2 4 50 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:43881658-43881685 minimal NA NA AUUUA UAUU minimal chr10 - 43881783 43881808 3'utr HNRNPF Ensembl G2463.1 TTAAATGTGGATCTTTTACACCACA 4 4 4 30 1 0.602059991 0 0 0 4 0 0 4 chr10:43881783-43881808 NA NA NA NA NA NA chr10 - 44043384 44043407 NoAnnotation G2464.1 CCACATTCATAATATTTAAATAT 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:44043384-44043407 minimal NA NA AUUUA UAUU minimal chr10 - 44052067 44052101 3'utr ZNF239 Ensembl G2466.1 TTAAATATTTAGTATCACTCTTACTTTATATTCT 53 8 50 512 0.943396226 1.698970004 0 0.52173913 0.79245283 11 3 0 50 chr10:44052067-44052101 minimal NA NA AUUUA UAUU minimal chr10 - 46127810 46127833 intron ANUBL1 Ensembl G2468.1 CCTTTTTATTTATTCACTTATTT 3 2 2 41 0.666666667 0.301029996 0 0 0 3 1 0 2 chr10:46127810-46127833 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 50664110 50664131 3'utr ERCC6 Ensembl G2473.1 CCTTATACCATCCTTATTTTG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr10:50664110-50664131 minimal NA NA NA UAUU minimal chr10 - 50911213 50911253 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G2476.1 GAGATTCTCACTGTCCCTATCTACTATCCGGTGAAACCAC 183 2 178 1305 0.946808511 1.472268752 0.377659574 0.727272727 0.936170213 12 5 5 178 chr10:50911213-50911253 NA NA NA NA NA NA chr10 - 51026411 51026435 3'utr PARG Ensembl G2479.1 AAACTCCCATATCATCTATATTTT 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr10:51026411-51026435 NA NA NA NA UAUU minimal chr10 - 52071029 52071052 coding SGMS1 Ensembl G2481.1 CTAACACTTACCTACTTATTTAT 4 2 3 35 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr10:52071029-52071052 UUAUUUAU NA NA AUUUA UAUU minimal chr10 - 58116146 58116174 NoAnnotation G2488.1 TTCTCATAAATTAATTTTTTAAATTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr10:58116146-58116174 minimal NA NA NA UAUU minimal chr1 + 66033261 66033287 intron LEPR Ensembl G249.1 CATCTATACCTATTTATATTAATTTA 4 3 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr1:66033261-66033287 minimal NA NA AUUUA UAUU minimal chr10 - 61550963 61550983 3'utr CCDC6 Ensembl G2493.1 CTATATAAATTTTATTTATA 15 3 11 154 0.733333333 1.041392685 0 0.666666667 0.866666667 2 4 0 11 chr10:61550963-61550983 UUAUUUAU NA NA AUUUA UAUU minimal chr10 - 61552301 61552322 3'utr CCDC6 Ensembl G2495.1 ATATCTTTTTTATATTTTTTT 4 2 3 60 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr10:61552301-61552322 minimal NA NA NA UAUU minimal chr10 - 64927132 64927153 3'utr JMJD1C Ensembl G2501.1 CTAAATATTAAACTTAATATG 18 5 18 126 1 1.255272505 0 0.571428571 0.833333333 3 0 0 18 chr10:64927132-64927153 NA NA NA NA UAUU minimal chr10 - 65137655 65137680 intron JMJD1C Ensembl G2503.1 CCATACTATTTATTTTATTTATTTA 5 3 5 69 1 0.698970004 0 0.25 0.4 3 0 0 5 chr10:65137655-65137680 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 66100723 66100749 3'utr LEPR Ensembl G251.1 CTTTTAATCACTAACATATTTTACTT 4 2 3 38 0.75 0.477121255 0.5 0.333333333 0.5 2 1 0 3 chr1:66100723-66100749 NA NA NA NA UAUU minimal chr10 - 70113591 70113613 intron RUFY2 Ensembl G2515.1 CATTCATTTACTTTATATATAT 4 2 2 44 0.5 0.301029996 0 0 0 4 2 0 2 chr10:70113591-70113613 minimal NA NA AUUUA NA minimal chr10 - 70173827 70173853 3'utr DNA2 Ensembl G2519.1 TTTTTTATTTAATAAATTTTTTCTAC 4 2 2 60 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr10:70173827-70173853 minimal NA NA AUUUA UAUU minimal chr10 - 75010207 75010228 3'utr MRPS16 Ensembl G2534.1 AACAGTTAACCTTTCTTAATT 2 2 2 13 1 0.301029996 0 0 0 2 0 0 2 chr10:75010207-75010228 NA NA NA NA NA NA chr10 - 75135670 75135692 3'utr ANXA7 Ensembl G2535.1 CCTTAATTCTAATTTTATTTTG 13 6 11 150 0.846153846 1.041392685 0 0.2 0.384615385 8 2 0 11 chr10:75135670-75135692 minimal NA NA NA UAUU minimal chr10 - 77157700 77157727 3'utr ZNF503 Ensembl G2545.1 AACACTTAACTATTTTTAATTTTTAAG 25 10 23 257 0.741935484 0.516629796 0 0.318181818 0.516129032 15 2 6 23 chr10:77157700-77157727 NA NA NA NA UAUU minimal chr10 - 81440502 81440525 NoAnnotation G2553.1 CTTTAAATTTTTCTATTATTATT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr10:81440502-81440525 minimal NA NA NA UAUU minimal chr10 - 81441038 81441063 NoAnnotation G2554.1 CTTTAATTTTTTAAACATATTTATG 6 4 5 73 0.833333333 0.698970004 0 0 0 6 1 0 5 chr10:81441038-81441063 minimal NA NA AUUUA UAUU minimal chr10 - 81442257 81442294 NoAnnotation G2555.1 TTATTTTATTACTATTTATTAACTTATTTATCTTATT 4 4 4 61 1 0.602059991 0 0 0 4 0 0 4 chr10:81442257-81442294 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 88196717 88196737 3'utr WAPAL Ensembl G2561.1 TCTATATTTAAAATTAGATG 4 2 4 32 1 0.602059991 0 0.5 0.75 1 0 0 4 chr10:88196717-88196737 minimal NA NA AUUUA UAUU minimal chr10 - 88250460 88250488 intron WAPAL Ensembl G2562.1 CATACATATATATCAAAATTATAATTCC 4 2 4 36 1 0.602059991 0 0.5 0.75 1 0 0 4 chr10:88250460-88250488 minimal NA NA NA NA NA chr10 - 88280058 88280087 intron WAPAL Ensembl G2563.1 CACAAAATTATTATTATCATTATTATTAT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr10:88280058-88280087 minimal NA NA NA UAUU minimal chr10 - 89512903 89512935 3'utr ATAD1 Ensembl G2567.1 TCCCATTTTTAATAACTATATTCTATTATTTT 16 6 15 200 0.789473684 0.574031268 0 0.1875 0.315789474 13 1 3 15 chr10:89512903-89512935 minimal NA NA NA UAUU minimal chr1 + 67450744 67450773 3'utr MIER1 Ensembl G257.1 ATTTTTTTACTTTAAAGCTGTCAGACTCT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:67450744-67450773 NA NA NA NA NA NA chr10 - 92672428 92672449 3'utr ANKRD1 Ensembl G2578.1 AAACTCTTATTTATTTTTATG 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr10:92672428-92672449 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 94213395 94213421 3'utr IDE Ensembl G2582.1 CTTTAACACAACATATTTATTTAACA 8 3 5 75 0.625 0.698970004 0 0.75 0.875 1 3 0 5 chr10:94213395-94213421 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 95426496 95426520 NoAnnotation G2585.1 CATAACTATATTATTCTATTTTCT 9 5 7 98 0.777777778 0.84509804 0 0.125 0.222222222 7 2 0 7 chr10:95426496-95426520 minimal NA NA NA UAUU minimal chr10 - 95445564 95445589 intron FRA10AC1 Ensembl G2586.1 CTAATACTTAAAACTATTAACTATT 4 3 4 29 1 0.602059991 0 0 0 4 0 0 4 chr10:95445564-95445589 NA NA NA NA UAUU minimal chr10 - 96093115 96093137 3'utr NOC3L Ensembl G2589.1 TTTTTCTTATTAATATAATTAT 8 3 8 104 1 0.903089987 0 0.5 0.75 2 0 0 8 chr10:96093115-96093137 minimal NA NA NA UAUU minimal chr10 - 96093512 96093545 3'utr NOC3L Ensembl G2590.1 CTACTTTTTATAACTAAATACTCTTTAAATATT 6 3 5 59 0.833333333 0.698970004 0 0.25 0.5 3 1 0 5 chr10:96093512-96093545 minimal NA NA NA UAUU minimal chr10 - 96105410 96105432 intron NOC3L Ensembl G2591.1 ATACATATTTTAACTATTTATA 4 3 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr10:96105410-96105432 minimal NA NA AUUUA UAUU minimal chr10 - 98281276 98281297 3'utr TM9SF3 Ensembl G2600.1 CAATTTACTGTACAGTTAGAA 4 2 4 21 1 0.602059991 0 0.5 0.75 1 0 0 4 chr10:98281276-98281297 minimal NA NA AUUUA NA minimal chr10 - 98281368 98281395 3'utr TM9SF3 Ensembl G2601.1 ACCAACTTCCCATTTATTTATCTTAAA 21 6 18 181 0.782608696 0.77815125 0 0.3125 0.52173913 11 3 2 18 chr10:98281368-98281395 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 67452446 67452467 3'utr MIER1 Ensembl G261.1 TTTTACTTAAAACTTTTAATT 4 2 3 45 0.6 0.176091259 0 0.25 0.4 3 1 1 3 chr1:67452446-67452467 NA NA NA NA NA NA chr10 - 101949034 101949055 3'utr CHUK Ensembl G2612.1 TAAAACATTACTTATTTAACT 6 3 4 46 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr10:101949034-101949055 minimal NA NA AUUUA UAUU minimal chr10 - 102032977 102032999 NoAnnotation G2613.1 AATTATTCTCTTTTACCTATTT 4 2 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:102032977-102032999 minimal NA NA NA UAUU minimal chr10 - 102033025 102033047 NoAnnotation G2614.1 TCCTTCACCTTAATATTTATCT 4 2 2 38 0.5 0.301029996 0.25 0 0 4 2 0 2 chr10:102033025-102033047 minimal NA NA AUUUA UAUU minimal chr10 - 102034702 102034725 3'utr BLOC1S2 Ensembl G2615.1 TAACTTACTTTTCCATAATATTG 17 5 15 166 0.882352941 1.176091259 0 0.5 0.764705882 4 2 0 15 chr10:102034702-102034725 NA NA NA NA UAUU minimal chr10 - 102034861 102034883 3'utr BLOC1S2 Ensembl G2616.1 ATTACTACATTATTTTCTTAAG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:102034861-102034883 minimal NA NA NA UAUU minimal chr1 + 67453225 67453245 3'utr MIER1 Ensembl G262.1 CATTTAAAATTTCAAATTAG 3 3 3 21 1 0.477121255 1 0 0 3 0 0 3 chr1:67453225-67453245 minimal NA NA AUUUA NA minimal chr10 - 104942032 104942054 intron NT5C2 Ensembl G2622.1 CTATTATTACCCTATTATCTAT 4 2 4 38 1 0.602059991 0 1 1 0 0 0 4 chr10:104942032-104942054 minimal NA NA NA UAUU minimal chr10 - 105357596 105357616 3'utr SH3PXD2A Ensembl G2625.1 ATTTAACTAATATATTATTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr10:105357596-105357616 minimal NA NA AUUUA UAUU minimal chr10 - 105696915 105696940 repeat LINE-L1MC3 RepeatMasker G2626.1 CCAACACTATTTTTATTTATTTATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr10:105696915-105696940 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 106072201 106072222 3'utr ITPRIP Ensembl G2628.1 AAATTTCCTTATTTATTTATG 15 5 14 166 0.933333333 1.146128036 0 0.428571429 0.733333333 4 1 0 14 chr10:106072201-106072222 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr10 - 115881096 115881118 3'utr C10orf118 Ensembl G2639.1 TTATATATGCTACCCTGGTGAA 4 2 4 28 1 0.602059991 0 1 1 0 0 0 4 chr10:115881096-115881118 minimal NA NA NA NA NA chr10 - 115882980 115883005 3'utr C10orf118 Ensembl G2640.1 TTCTTTTTACCAATAATAATTTATC 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr10:115882980-115883005 minimal NA NA AUUUA NA minimal chr10 - 119037857 119037886 NoAnnotation G2643.1 ATCACTATTATTTTTACTTCTTAATATAT 6 5 6 79 1 0.77815125 0 0 0 6 0 0 6 chr10:119037857-119037886 minimal NA NA NA UAUU minimal chr10 - 119039758 119039791 NoAnnotation G2644.1 TAATTAGACTTTAAAATATATTTTCTACATTAG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr10:119039758-119039791 NA NA NA NA UAUU minimal chr10 - 119040911 119040933 3'utr PDZD8 Ensembl G2645.1 TATACTTCATTACTTATTTAAG 8 4 8 79 1 0.903089987 0 0.4 0.625 3 0 0 8 chr10:119040911-119040933 minimal NA NA AUUUA UAUU minimal chr10 - 119041924 119041946 3'utr PDZD8 Ensembl G2647.1 AATATAATCTTTTAAAATATTG 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr10:119041924-119041946 NA NA NA NA UAUU minimal chr10 - 119042520 119042550 3'utr PDZD8 Ensembl G2648.1 AATTTATTTTTACTAAATTATTTAACTTTT 22 6 20 273 0.909090909 1.301029996 0 0.266666667 0.5 11 2 0 20 chr10:119042520-119042550 minimal NA NA AUUUA UAUU minimal chr10 - 119128008 119128035 intron PDZD8 Ensembl G2649.1 TATTTATTTACTTTTTCATACTTTTTT 3 2 3 46 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr10:119128008-119128035 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr10 - 119765764 119765785 3'utr RAB11FIP2 Ensembl G2651.1 TTACATAATTAAACTATTTCT 4 2 2 36 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr10:119765764-119765785 NA NA NA NA UAUU minimal chr10 - 120095391 120095418 intron FAM204A Ensembl G2653.1 TCTTTATTTAACCTTTTATTTATCTTT 10 5 10 140 1 1 0 0.25 0.4 6 0 0 10 chr10:120095391-120095418 UUAUUUAU NA NA AUUUA UAUU minimal chr10 - 121333280 121333320 NoAnnotation G2658.1 TCATCTATTACACTCTTCTGTTATAAAATATACCCTTATT 4 3 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr10:121333280-121333320 minimal NA NA NA UAUU minimal chr10 - 123500471 123500495 3'utr ATE1 Ensembl G2668.1 TCCTTATTTAAATTATTTCCATTC 5 2 5 51 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr10:123500471-123500495 minimal NA NA AUUUA UAUU minimal chr10 - 124750853 124750876 3'utr IKZF5 Ensembl G2675.1 ATAATTTATCTCCACTAATATTT 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr10:124750853-124750876 minimal NA NA AUUUA UAUU minimal chr10 - 124764216 124764244 intron IKZF5 Ensembl G2677.1 CATACTAATATATTTAAAATTCTAATTT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr10:124764216-124764244 minimal NA NA AUUUA UAUU minimal chr10 - 132890676 132890700 3'utr TCERG1L Ensembl G2684.1 TATAAAAAATTTTTAATTTTTTTT 4 2 4 51 1 0.602059991 0 0 0 4 0 0 4 chr10:132890676-132890700 NA NA NA NA NA NA chr10 - 135075932 135075955 lincRNA ADAM8 Ensembl G2685.1 TATATTTTACTAATAAATTATTG 5 3 5 54 1 0.698970004 0 0 0 5 0 0 5 chr10:135075932-135075955 minimal NA NA NA UAUU minimal chr11 + 9407319 9407341 intron IPO7 Ensembl G2704.1 CTTAATTGCATGAATATTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:9407319-9407341 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 + 9444618 9444640 coding IPO7 Ensembl G2705.1 ACATTAAATTATATTAATCAAG 3 2 3 21 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr11:9444618-9444640 minimal NA NA NA UAUU minimal chr11 + 9459727 9459747 coding IPO7 Ensembl G2706.1 CTTTTATCCTTTTATTTAAC 6 3 6 66 1 0.77815125 0.5 0.25 0.5 3 0 0 6 chr11:9459727-9459747 minimal NA NA AUUUA UAUU minimal chr1 + 70717663 70717685 3'utr SRSF11 Ensembl G271.1 ATAATAAAACCCTTAAACTTAT 3 2 3 18 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr1:70717663-70717685 minimal NA NA NA NA NA chr11 + 9610570 9610591 3'utr WEE1 Ensembl G2711.1 TCCATCTTATATTTCTTTTTT 8 2 3 109 0.375 0.477121255 0 0.6 0.75 2 5 0 3 chr11:9610570-9610591 minimal NA NA NA UAUU minimal chr11 + 9610895 9610919 3'utr WEE1 Ensembl G2712.1 TATTAATGTAGTATAATAATTACT 12 2 12 114 1 1.079181246 0 0.6 0.833333333 2 0 0 12 chr11:9610895-9610919 NA NA NA NA UAUU minimal chr11 + 13752616 13752639 3'utr FAR1 Ensembl G2728.1 TTTCTTATTTCACTTAACTCATT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr11:13752616-13752639 minimal NA NA NA UAUU minimal chr11 + 15099802 15099824 3'utr CALCB Ensembl G2731.1 CATCATTTTTATATTTAATTCT 4 3 3 47 0.75 0.477121255 0 0 0 4 1 0 3 chr11:15099802-15099824 minimal NA NA AUUUA UAUU minimal chr11 + 32116465 32116491 intron RCN1 Ensembl G2750.1 ATCTTATTTATTCTTACAACAAATAT 4 2 2 36 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr11:32116465-32116491 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 32127227 32127252 3'utr RCN1 Ensembl G2751.1 ACTCATATTTACTAATTTAATAAAT 3 2 2 29 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr11:32127227-32127252 minimal NA NA AUUUA UAUU minimal chr11 + 32808132 32808154 NoAnnotation G2755.1 CATTCATCATATTATTTATTTT 4 2 2 46 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr11:32808132-32808154 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 32998662 32998682 3'utr QSER1 Ensembl G2760.1 ACATACTATTTTCCCTATCG 11 5 9 79 0.818181818 0.954242509 1 0.833333333 0.909090909 1 2 0 9 chr11:32998662-32998682 NA NA NA NA UAUU minimal chr11 + 33000974 33000996 3'utr QSER1 Ensembl G2764.1 TCATTTTCATTATAACCCAATT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr11:33000974-33000996 minimal NA NA NA NA NA chr11 + 33001269 33001297 3'utr QSER1 Ensembl G2765.1 ATTTTCCTTTTAATATACATATTTATTT 4 2 3 64 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:33001269-33001297 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 + 33094704 33094726 3'utr TCP11L1 Ensembl G2768.1 CCATTTTCTCCCCCTATTTATT 3 3 3 30 1 0.477121255 0.333333333 0 0 3 0 0 3 chr11:33094704-33094726 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 + 33096586 33096611 intron TCP11L1 Ensembl G2769.1 TACTTTTATTCATATTTATTTATTT 6 3 5 93 0.714285714 0.397940009 0 0.166666667 0.285714286 5 1 1 5 chr11:33096586-33096611 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 35642363 35642389 3'utr FJX1 Ensembl G2774.1 TAAATATACTAAACAAACTTATATTT 8 2 8 59 1 0.903089987 0 0.5 0.75 2 0 0 8 chr11:35642363-35642389 minimal NA NA NA UAUU minimal chr11 + 43346209 43346235 intron API5 Ensembl G2784.1 TCCACAATTCATTTATTTATTTATTT 4 2 2 53 0.5 0.301029996 0 0 0 4 2 0 2 chr11:43346209-43346235 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 43357597 43357621 3'utr API5 Ensembl G2785.1 TTATACTTTATTTTAATTAGTAAT 22 3 21 261 0.954545455 1.322219295 0.045454545 0.4 0.727272727 6 1 0 21 chr11:43357597-43357621 minimal NA NA NA UAUU minimal chr11 + 43773294 43773317 intron HSD17B12 Ensembl G2788.1 CACATTTAATTTACTTTACTATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:43773294-43773317 minimal NA NA AUUUA UAUU minimal chr1 + 11081638 11081659 intron TARDBP Ensembl G28.1 CCCATTTTTTAAATTATTATT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr1:11081638-11081659 minimal NA NA NA UAUU minimal chr11 + 57585308 57585339 3'utr CTNND1 Ensembl G2805.1 ATTATTATTATTATTTCTAATCCTTTTCCTT 29 11 19 415 0.612903226 0.801632346 0 0.166666667 0.35483871 20 10 2 19 chr11:57585308-57585339 minimal NA NA NA UAUU minimal chr11 + 57603319 57603341 NoAnnotation G2806.1 TAACTTAATTTATTATTTTTAC 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:57603319-57603341 minimal NA NA AUUUA UAUU minimal chr11 + 58385535 58385555 3'utr ZFP91 Ensembl G2808.1 CTTTTAACTTTTAATCATAT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr11:58385535-58385555 NA NA NA NA NA NA chr1 + 76260198 76260218 coding RABGGTB Ensembl G281.1 ATCCTTTTCATACCTTATTT 3 2 3 30 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr1:76260198-76260218 minimal NA NA NA UAUU minimal chr11 + 58388277 58388299 3'utr ZFP91 Ensembl G2810.1 ATCAATTTAAAATATTTTATTT 8 3 7 89 0.875 0.84509804 0 0.25 0.625 3 1 0 7 chr11:58388277-58388299 minimal NA NA AUUUA UAUU minimal chr11 + 58396500 58396521 NoAnnotation G2811.1 CATTATTTTATATTATTTAAT 4 2 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:58396500-58396521 minimal NA NA AUUUA UAUU minimal chr11 + 58921919 58921940 repeat LTR-MER4B-int RepeatMasker G2816.1 ATTTCTACTACTCCAATTATT 4 2 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:58921919-58921940 minimal NA NA NA UAUU minimal chr1 + 76260444 76260473 repeat Low_complexity-AT_rich RepeatMasker G282.1 TTAAATTAATTTTAATAAATTATATAATT 41 8 38 458 0.926829268 1.579783597 0 0.304347826 0.609756098 16 3 0 38 chr1:76260444-76260473 minimal NA NA NA NA NA chr11 + 61166278 61166306 3'utr TMEM216 Ensembl G2823.1 AAACTAACTTTATTTTATAATAAATATG 13 5 12 126 0.857142857 0.77815125 0.214285714 0.25 0.571428571 6 1 1 12 chr11:61166278-61166306 minimal NA NA NA UAUU minimal chr11 + 61166645 61166666 NoAnnotation G2824.1 CATATTCTAAACTAACTTTTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr11:61166645-61166666 NA NA NA NA UAUU minimal chr11 + 61921819 61921845 NoAnnotation G2826.1 TAATATAATTCTTCCAATTTTATTTT 9 4 6 114 0.666666667 0.77815125 0 0.142857143 0.333333333 6 3 0 6 chr11:61921819-61921845 minimal NA NA NA UAUU minimal chr11 + 61921961 61921990 NoAnnotation G2827.1 ATAAGTTTGGGGAGAATTAACATATTTAT 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr11:61921961-61921990 minimal NA NA AUUUA UAUU minimal chr11 + 61922020 61922043 NoAnnotation G2828.1 TCTCTCCATTTATTTGCATGTTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:61922020-61922043 minimal NA NA AUUUA UAUU minimal chr11 + 62507602 62507634 3'utr TTC9C Ensembl G2829.1 TTAAATTAATTTCTTATTCTCCTTAATATTCC 5 3 3 56 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr11:62507602-62507634 minimal NA NA NA UAUU minimal chr11 + 62507687 62507728 3'utr TTC9C Ensembl G2830.1 CTATTTCTCATACTTAGATCATTCATACACTATATTTATTT 5 2 3 48 0.8 0.602059991 0 0 0 5 1 0 4 chr11:62507687-62507728 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 + 63971697 63971717 3'utr STIP1 Ensembl G2836.1 CCTCATCTCTCTATATTTAT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr11:63971697-63971717 minimal NA NA AUUUA UAUU minimal chr11 + 65198801 65198821 lincRNA NEAT1 Ensembl G2841.1 TACAAATATCTATATTATTG 4 2 4 32 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr11:65198801-65198821 minimal NA NA NA UAUU minimal chr11 + 65201461 65201482 lincRNA NEAT1 Ensembl G2843.1 TATATATTTATATTTTAGCTG 2 2 2 21 1 0.301029996 1 0 0 2 0 0 2 chr11:65201461-65201482 minimal NA NA AUUUA UAUU minimal chr11 + 65268286 65268315 lincRNA MALAT1 Ensembl G2845.1 TAACCTTTTATTTATTTTCTAATATAATG 76 10 43 1035 0.518072289 0.730378469 0.108433735 0.340909091 0.65060241 29 33 7 43 chr11:65268286-65268315 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 66034615 66034639 3'utr KLC2 Ensembl G2849.1 CTCCATCCCTTATTTATTCCTTCC 5 2 5 45 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr11:66034615-66034639 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 67052933 67052958 3'utr ADRBK1 Ensembl G2857.1 CCTTTTATAAACCTCTAATTTATTT 6 3 4 69 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr11:67052933-67052958 minimal NA NA AUUUA UAUU minimal chr11 + 69466653 69466678 3'utr CCND1 Ensembl G2861.1 TTATTATATTCCGTAGGTAGATGTG 14 2 14 118 1 1.146128036 1 0.666666667 0.928571429 1 0 0 14 chr11:69466653-69466678 minimal NA NA NA UAUU minimal chr11 + 69466900 69466927 3'utr CCND1 Ensembl G2862.1 ACATAATATATTCTATTTTTATACTCT 12 6 11 139 0.916666667 1.041392685 0 0.2 0.333333333 8 1 0 11 chr11:69466900-69466927 minimal NA NA NA UAUU minimal chr11 + 76512993 76513019 NoAnnotation G2876.1 TTTATTCTTCTCTTTATTTATTTAAG 3 2 3 38 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr11:76512993-76513019 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 82818693 82818715 NoAnnotation G2885.1 AATATATATTTCTATTCTTATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr11:82818693-82818715 minimal NA NA NA UAUU minimal chr11 + 82925344 82925367 3'utr ANKRD42 Ensembl G2888.1 AAATTTTATTTATCTTTCATATT 4 2 2 54 0.75 0.477121255 0 0 0 4 1 0 3 chr11:82925344-82925367 UUAUUUAU NA NA AUUUA UAUU minimal chr11 + 85195043 85195101 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G2891.1 AATGCAGCCCAAAGCGGGTGGTAAACTCCATTTAAGGCTAAATACCGGCACGAGACCG 1286 3 818 5623 0.582206406 0.833572058 0.570106762 0.411483254 0.912455516 123 468 119 818 chr11:85195043-85195101 minimal NA NA AUUUA NA minimal chr11 + 85195155 85195183 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G2892.1 AAGAGGGCGTGAAACCGTTAAGAGGTAA 656 4 15 1958 0.012975779 -1.523746467 0.965397924 0.429906542 0.947231834 61 641 500 15 chr11:85195155-85195183 NA NA NA NA NA NA chr11 + 85195197 85195248 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G2893.1 CGCAGTCCGCCCGGAGGATTCAACCCGGTGGCGGATCTTTCCCGCCCCCCG 208 4 153 586 0.640167364 0.679541452 0.623430962 0.35443038 0.786610879 51 55 31 153 chr11:85195197-85195248 NA NA NA NA NA NA chr11 + 85345399 85345421 3'utr TMEM126B Ensembl G2894.1 CTAATAATAATTCTTTACATTT 4 3 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:85345399-85345421 NA NA NA NA NA NA chr11 + 85980003 85980028 intron EED Ensembl G2896.1 TAGTTTGCCAACCCCTGCCCCTGTT 3 2 3 19 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:85980003-85980028 NA NA NA NA NA NA chr11 + 85998729 85998754 NoAnnotation G2897.1 CAAAATCACTATTTTTTATTTATTT 5 3 5 62 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr11:85998729-85998754 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 86519957 86519978 3'utr PRSS23 Ensembl G2899.1 TCTTATAATCTTTTACCTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr11:86519957-86519978 minimal NA NA NA UAUU minimal chr1 + 11082057 11082086 intron TARDBP Ensembl G29.1 TTCATTGCTTATTTTTCCTCTGGCTTTAG 4 3 4 46 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr1:11082057-11082086 minimal NA NA NA UAUU minimal chr1 + 78343087 78343112 3'utr FAM73A Ensembl G290.1 CTTAATTTAACAATTACCTATTTAT 8 3 7 76 0.875 0.84509804 0.125 0.333333333 0.5 4 1 0 7 chr1:78343087-78343112 minimal NA NA AUUUA UAUU minimal chr11 + 94281353 94281382 3'utr FUT4 Ensembl G2913.1 TCCATTTAGAACTAACCATATTATTTATG 4 4 4 33 1 0.602059991 0.75 0 0 4 0 0 4 chr11:94281353-94281382 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 78344803 78344828 NoAnnotation G292.1 TTTATATAACCCATTTACTTTTATT 6 2 5 74 0.833333333 0.698970004 0.166666667 0.5 0.666666667 2 1 0 5 chr1:78344803-78344828 minimal NA NA AUUUA UAUU minimal chr11 + 102207880 102207908 3'utr BIRC3 Ensembl G2929.1 TATTATAACTTTAACTTTTATCCTAATT 4 3 4 45 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:102207880-102207908 minimal NA NA NA UAUU minimal chr11 + 102249074 102249097 3'utr BIRC2 Ensembl G2931.1 TATCATATATTTAATCTTAATCT 5 2 4 53 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr11:102249074-102249097 minimal NA NA AUUUA UAUU minimal chr11 + 107834445 107834466 NoAnnotation G2939.1 TTTCCTAATTTTTAACTTATT 2 2 2 23 1 0.301029996 0.5 0 0 2 0 0 2 chr11:107834445-107834466 minimal NA NA NA UAUU minimal chr11 + 107834875 107834896 NoAnnotation G2940.1 CATACTATTATATTTACAATG 3 2 3 24 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr11:107834875-107834896 minimal NA NA AUUUA UAUU minimal chr11 + 107836410 107836433 repeat Low_complexity-AT_rich RepeatMasker G2941.1 TTACTTTATTTAAAATTTAATTT 8 5 7 99 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr11:107836410-107836433 minimal NA NA AUUUA UAUU minimal chr11 + 107838557 107838579 NoAnnotation G2942.1 TACCTCATTATTATTTCTGGGT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:107838557-107838579 minimal NA NA NA UAUU minimal chr11 + 107944140 107944168 coding CUL5 Ensembl G2943.1 TTACTTACACTATTTAATAGATTTAGTA 3 2 3 33 1 0.477121255 0.333333333 0 0 3 0 0 3 chr11:107944140-107944168 minimal NA NA AUUUA UAUU minimal chr11 + 108552714 108552740 intron DDX10 Ensembl G2947.1 CCCTTTAGATAAATTAATTATTTATT 7 2 7 73 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr11:108552714-108552740 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 110309136 110309163 intron FDX1 Ensembl G2951.1 TCTTCTTTTTTAAATATTTATTTATTT 2 2 2 35 1 0.301029996 0 0 0 2 0 0 2 chr11:110309136-110309163 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 111934545 111934565 3'utr DLAT Ensembl G2956.1 ACTTTCTATTAATATTTATG 7 4 7 70 1 0.84509804 1 0.25 0.571428571 3 0 0 7 chr11:111934545-111934565 minimal NA NA AUUUA UAUU minimal chr11 + 112042107 112042129 repeat DNA-MER2 RepeatMasker G2957.1 TATTTATATTTTACCTATATCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:112042107-112042129 minimal NA NA AUUUA UAUU minimal chr1 + 78477607 78477630 repeat Low_complexity-AT_rich RepeatMasker G296.1 CTATATATTTTATTAATATATTT 4 2 3 51 0.75 0.477121255 0 0 0 4 1 0 3 chr1:78477607-78477630 minimal NA NA NA UAUU minimal chr11 + 117039476 117039497 3'utr PAFAH1B2 Ensembl G2963.1 TATATTTTATTTTTTTTATTG 5 2 5 75 1 0.698970004 1 0.5 0.8 1 0 0 5 chr11:117039476-117039497 minimal NA NA NA UAUU minimal chr11 + 117041364 117041391 3'utr PAFAH1B2 Ensembl G2964.1 TCCAACTTACTTTATTTTATTTTTTTA 9 7 9 111 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr11:117041364-117041391 minimal NA NA NA UAUU minimal chr11 + 118394347 118394367 3'utr MLL Ensembl G2970.1 CTATTTTTTAAACCGCGGTA 5 3 4 36 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr11:118394347-118394367 NA NA NA NA UAUU minimal chr11 + 118472069 118472102 coding ARCN1 Ensembl G2972.1 CCCAGCTGCTCCTTTATTTTAATCCCTAAATAT 10 5 10 101 1 1 0 0.25 0.4 6 0 0 10 chr11:118472069-118472102 minimal NA NA NA UAUU minimal chr1 + 78482764 78482789 3'utr DNAJB4 Ensembl G298.1 TCTTCTATAACTTACTAATAATATT 11 7 11 111 0.916666667 0.740362689 0 0.1 0.25 9 0 1 11 chr1:78482764-78482789 NA NA NA NA UAUU minimal chr11 + 124825658 124825682 intron CCDC15 Ensembl G2985.1 CAATATACTATATTCATTTTATTT 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr11:124825658-124825682 minimal NA NA NA UAUU minimal chr1 + 78482964 78482989 repeat Low_complexity-AT_rich RepeatMasker G299.1 TTTTAATTTTTTAAATATATTTATG 3 3 3 45 1 0.477121255 1 0 0 3 0 0 3 chr1:78482964-78482989 minimal NA NA AUUUA UAUU minimal chr11 + 125530504 125530528 NoAnnotation G2992.1 AATTAAACCATTTATTTATTTAGA 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:125530504-125530528 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 + 125537912 125537932 NoAnnotation G2993.1 TATTTTTCCTCTAATTAATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr11:125537912-125537932 NA NA NA NA UAUU minimal chr1 + 945880 945907 repeat Simple_repeat-(TTTA)n RepeatMasker G3.1 AATCTTATTTAAATATTTTATTTATTT 25 8 22 375 0.88 1.342422681 0 0.352941176 0.56 11 3 0 22 chr1:945880-945907 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 11083130 11083150 3'utr TARDBP Ensembl G30.1 AAAATCTCCTTTTAGGAGAT 3 2 3 18 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr1:11083130-11083150 NA NA NA NA NA NA chr11 - 3006902 3006931 intron NAP1L4 Ensembl G3012.1 TTATTATTTATTAACACAAAATTATATTT 3 2 2 30 1 0.477121255 0 0 0 3 0 0 3 chr11:3006902-3006931 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 - 6703145 6703168 3'utr MRPL17 Ensembl G3022.1 AATATATATAAATTTATTTATTT 5 3 5 60 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr11:6703145-6703168 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 - 10544264 10544284 intron RNF141 Ensembl G3033.1 TTACTATATTCTATTTATTG 5 2 3 57 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr11:10544264-10544284 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 - 10819160 10819193 3'utr EIF4G2 Ensembl G3035.1 TCTTAATCATAGTCTACCATCAAATATTTTAGG 20 3 20 145 1 1.301029996 0 0.5 0.9 2 0 0 20 chr11:10819160-10819193 NA NA NA NA UAUU minimal chr11 - 10823014 10823047 snoRNA SNORD97 Ensembl G3036.1 TCCTGTGAGCGAAGATTATGAGATATGAGGGCA 14 3 4 78 0.25 0.124938737 0.0625 0.076923077 0.25 12 10 2 4 chr11:10823014-10823047 minimal NA NA NA NA NA chr11 - 10876826 10876850 NoAnnotation G3040.1 TATAACAACTCTTAATAATTTATT 5 2 2 45 0.4 0.301029996 0 0 0 5 3 0 2 chr11:10876826-10876850 minimal NA NA AUUUA UAUU minimal chr1 + 82382390 82382412 repeat Low_complexity-AT_rich RepeatMasker G305.1 TTTATTAATACTTTTAATTTAA 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr1:82382390-82382412 minimal NA NA AUUUA UAUU minimal chr11 - 17170900 17170922 intron PIK3C2A Ensembl G3051.1 ATACCTTATTTATTTTTAGTTT 5 2 5 53 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr11:17170900-17170922 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 - 22645110 22645134 repeat SINE-MIR3 RepeatMasker G3057.1 TTAAATTTCCTTATTTTTCCCTTG 4 3 3 50 0.75 0.477121255 0 0 0 4 1 0 3 chr11:22645110-22645134 minimal NA NA NA UAUU minimal chr11 - 22645889 22645916 3'utr FANCF Ensembl G3058.1 ACAAACAAAATACCCTTTTTCTTTTAG 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:22645889-22645916 NA NA NA NA NA NA chr11 - 27516160 27516186 3'utr LIN7C Ensembl G3062.1 ATTACTTCATTTATCAATTTAATTCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:27516160-27516186 minimal NA NA AUUUA NA minimal chr11 - 27519357 27519383 3'utr LIN7C Ensembl G3065.1 ATTTCTTTTAAATACTATTCATTTTT 8 2 5 112 0.625 0.698970004 0 0.6 0.75 2 3 0 5 chr11:27519357-27519383 NA NA NA NA UAUU minimal chr11 - 27519438 27519468 3'utr LIN7C Ensembl G3066.1 ATAGCATTACTTATTACATCCCTATTTATG 33 7 15 379 0.416666667 0.574031268 0.027777778 0.352941176 0.694444444 11 18 3 15 chr11:27519438-27519468 minimal NA NA AUUUA UAUU minimal chr11 - 27519495 27519519 3'utr LIN7C Ensembl G3067.1 CTAAAATACATATTCTTAATATTT 11 4 8 100 0.727272727 0.903089987 0 0.222222222 0.363636364 7 3 0 8 chr11:27519495-27519519 NA NA NA NA UAUU minimal chr11 - 27519769 27519791 3'utr LIN7C Ensembl G3068.1 CTTACTCTATTTTTTTTAACCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:27519769-27519791 NA NA NA NA UAUU minimal chr11 - 28042303 28042328 3'utr KIF18A Ensembl G3070.1 ATACATTATTTTAATCATATATATG 4 3 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:28042303-28042328 minimal NA NA NA UAUU minimal chr11 - 33162637 33162665 3'utr CSTF3 Ensembl G3079.1 ATTCAAACCTATTTAATCCTATTTAATC 3 2 3 29 1 0.477121255 0 0 0 3 0 0 3 chr11:33162637-33162665 minimal NA NA AUUUA UAUU minimal chr1 + 82457927 82457951 3'utr LPHN2 Ensembl G308.1 CCTATATTTAGTAATTAATTTATT 9 4 9 104 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr1:82457927-82457951 minimal NA NA AUUUA UAUU minimal chr11 - 33163181 33163211 coding CSTF3 Ensembl G3080.1 TTACTATTTTATTTTATTTTTTCTTATATC 3 3 3 54 1 0.477121255 0 0 0 3 0 0 3 chr11:33163181-33163211 minimal NA NA NA UAUU minimal chr11 - 33178358 33178384 intron CSTF3 Ensembl G3082.1 CATCTTTTAAAAAAAATTATTTATTT 4 2 2 49 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr11:33178358-33178384 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr11 - 36508739 36508768 3'utr TRAF6 Ensembl G3086.1 TTACTAACCACCTTTTACCATATTTATCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:36508739-36508768 minimal NA NA AUUUA UAUU minimal chr11 - 47491711 47491733 3'utr CELF1 Ensembl G3104.1 AATATTTATTACCTAAATTATA 9 5 9 79 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr11:47491711-47491733 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 - 58621328 58621350 repeat LINE-L1MA8 RepeatMasker G3113.1 ACTATACTTAAATATACTATTT 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:58621328-58621350 NA NA NA NA UAUU minimal chr1 + 86049249 86049273 3'utr CYR61 Ensembl G312.1 TTTTATTTATCAAAATGTAGCTTT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr1:86049249-86049273 UUAUUUAU NA NA AUUUA UAUU minimal chr11 - 61170140 61170167 3'utr CPSF7 Ensembl G3120.1 TAACAAAATATTTTTAAATAATAAATG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr11:61170140-61170167 NA NA NA NA UAUU minimal chr11 - 62609093 62609116 snRNA snRNA-U2 RepeatMasker G3125.1 GTACTTCCAGGAACGGTGCACTC 12 2 2 45 0.153846154 0 0.076923077 0.181818182 0.307692308 9 10 1 2 chr11:62609093-62609116 NA NA NA NA NA NA chr11 - 62609195 62609218 snRNA RNU2-2 Ensembl G3126.1 ATACGTCCTCTATCCGAGGACAA 30 3 27 122 0.870967742 1.130333768 0.032258065 0.363636364 0.774193548 7 3 1 27 chr11:62609195-62609218 NA NA NA NA NA NA chr1 + 86049342 86049366 3'utr CYR61 Ensembl G313.1 ATTTTATTTATGGAATTAACCATT 4 3 3 42 0.75 0.477121255 0 0 0 4 1 0 3 chr1:86049342-86049366 UUAUUUAU NA NA AUUUA UAUU minimal chr11 - 65421696 65421717 3'utr RELA Ensembl G3144.1 CCATATTTTATTCTTTTATTG 7 3 5 80 0.714285714 0.698970004 0 0.5 0.714285714 2 2 0 5 chr11:65421696-65421717 minimal NA NA NA UAUU minimal chr11 - 67924242 67924267 3'utr SUV420H1 Ensembl G3152.1 AATATTAAAAAAATCTATTCACTTT 4 3 4 30 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr11:67924242-67924267 NA NA NA NA UAUU minimal chr11 - 67924419 67924447 3'utr SUV420H1 Ensembl G3153.1 TATTTAACTCTTTTCAATCCTTTTAGAT 12 6 12 138 1 1.079181246 0 0.5 0.666666667 4 0 0 12 chr11:67924419-67924447 minimal NA NA AUUUA UAUU minimal chr11 - 74196179 74196201 NoAnnotation G3168.1 CTCAAATAATATCTTCTATTTT 15 3 6 151 0.4 0.77815125 0 0.666666667 0.866666667 2 9 0 6 chr11:74196179-74196201 NA NA NA NA UAUU minimal chr11 - 76061816 76061841 3'utr PRKRIR Ensembl G3171.1 ACCACTTAATCACTAAATATCTTTG 3 3 3 16 1 0.477121255 0 0 0 3 0 0 3 chr11:76061816-76061841 NA NA NA NA NA NA chr11 - 77377523 77377553 3'utr RSF1 Ensembl G3172.1 CTTTTTCATATTAAATATATATTATATTTA 9 5 7 128 0.777777778 0.84509804 0 0.125 0.222222222 7 2 0 7 chr11:77377523-77377553 minimal NA NA AUUUA UAUU minimal chr11 - 82685503 82685524 3'utr RAB30 Ensembl G3176.1 TATACTACATCATATTTTATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr11:82685503-82685524 minimal NA NA NA UAUU minimal chr11 - 85369835 85369864 NoAnnotation G3180.1 AATTTTATTTATCTCAACTTCCTTTAGCG 4 2 4 48 1 0.602059991 0 1 1 0 0 0 4 chr11:85369835-85369864 UUAUUUAU NA NA AUUUA UAUU minimal chr11 - 85371807 85371829 3'utr CREBZF Ensembl G3181.1 ACCTACTATTTCTATCATATTG 6 4 6 53 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr11:85371807-85371829 NA NA NA NA UAUU minimal chr11 - 89932414 89932445 NoAnnotation G3193.1 TTTTTAGCAGTCAGGTACTTTTAAATTATCT 5 3 5 48 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr11:89932414-89932445 minimal NA NA NA NA NA chr1 + 87810865 87810889 3'utr LMO4 Ensembl G320.1 TTTTACCTTAACAACATTCTATTT 5 4 4 48 0.8 0.602059991 0.2 0 0 5 1 0 4 chr1:87810865-87810889 NA NA NA NA UAUU minimal chr11 - 93459918 93459950 NoAnnotation G3202.1 TATTTTTTCTTTTTCTATTAATATTTAATAAG 7 4 7 116 0.875 0.544068044 0 0.142857143 0.25 6 0 1 7 chr11:93459918-93459950 minimal NA NA AUUUA UAUU minimal chr1 + 87815423 87815443 NoAnnotation G321.1 TTTAATATAATAACTTTATC 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:87815423-87815443 minimal NA NA NA NA NA chr11 - 94903731 94903755 3'utr SESN3 Ensembl G3212.1 AATTTACTATTTAGTAATTTATAG 7 2 6 77 0.75 0.477121255 0 0.142857143 0.25 6 1 1 6 chr11:94903731-94903755 minimal NA NA AUUUA UAUU minimal chr11 - 95562842 95562867 NoAnnotation G3221.1 CAACATAAATATATTTCACATATTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr11:95562842-95562867 NA NA NA NA UAUU minimal chr11 - 102267134 102267157 3'utr TMEM123 Ensembl G3232.1 TAAACTCTTCTTTTCTTTTTATT 3 2 3 40 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:102267134-102267157 minimal NA NA NA UAUU minimal chr11 - 102268716 102268742 3'utr TMEM123 Ensembl G3234.1 TTCATTTAATTTTAATTTTATATTTT 3 2 3 43 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr11:102268716-102268742 minimal NA NA AUUUA UAUU minimal chr11 - 105879151 105879179 3'utr KIAA1826 Ensembl G3240.1 CACTTATTACACTATCTAACCTAATATG 9 3 9 60 1 0.954242509 0 0.2 0.555555556 4 0 0 9 chr11:105879151-105879179 minimal NA NA NA UAUU minimal chr11 - 107187170 107187200 NoAnnotation G3244.1 TATTTATACTTTATTCTCCATTTTCTTATT 5 3 4 77 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr11:107187170-107187200 minimal NA NA AUUUA UAUU minimal chr11 - 107323358 107323391 intron CWF19L2 Ensembl G3248.1 CTTATTTATAATCCATTAATAATTTTTATTTAT 3 2 3 40 1 0.477121255 0 0 0 3 0 0 3 chr11:107323358-107323391 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 89300511 89300536 3'utr PKN2 Ensembl G325.1 ATTTTATATTTTTTTCTCCTAATCT 2 2 2 30 1 0.301029996 0.5 0 0 2 0 0 2 chr1:89300511-89300536 minimal NA NA NA UAUU minimal chr11 - 108342930 108342956 3'utr KDELC2 Ensembl G3250.1 CAAATATTTATATTTTTTCCATTTTG 5 4 5 59 1 0.698970004 0 0.25 0.4 3 0 0 5 chr11:108342930-108342956 minimal NA NA AUUUA UAUU minimal chr11 - 108343057 108343079 3'utr KDELC2 Ensembl G3251.1 CTTTATACCTTTCTATAATATT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr11:108343057-108343079 minimal NA NA NA UAUU minimal chr11 - 108377020 108377048 3'utr EXPH5 Ensembl G3254.1 CACCTTTTATAATTTTATACTTTTATAA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr11:108377020-108377048 minimal NA NA NA NA NA chr11 - 108377748 108377772 3'utr EXPH5 Ensembl G3255.1 CCTTTCCTCTTTTTCTATTTATCT 8 3 7 106 0.875 0.84509804 0 0.166666667 0.375 5 1 0 7 chr11:108377748-108377772 minimal NA NA AUUUA UAUU minimal chr11 - 110101962 110101985 3'utr RDX Ensembl G3261.1 TTTTTTTTAATCTAAATTTAATT 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr11:110101962-110101985 minimal NA NA AUUUA NA minimal chr11 - 116884999 116885023 intron SIK3 Ensembl G3275.1 TAATTAGTAAACAAATATTTATTG 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr11:116884999-116885023 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 - 118657042 118657068 5'utr DDX6 Ensembl G3278.1 ACTTATATTTATCTCTTCATTTTGGA 5 2 2 48 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr11:118657042-118657068 minimal NA NA AUUUA UAUU minimal chr11 - 129130372 129130394 NoAnnotation G3288.1 TTCTTATTTAAATATATTTATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr11:129130372-129130394 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr11 - 130097883 130097908 3'utr ZBTB44 Ensembl G3289.1 CCTATTTTAATATTTAAATATATAT 2 2 2 23 0.666666667 0 0 0 0 3 0 1 2 chr11:130097883-130097908 minimal NA NA AUUUA UAUU minimal chr11 - 134022402 134022429 3'utr NCAPD3 Ensembl G3297.1 ATTCTAATATTTTTTCTATTATTTATA 37 8 28 541 0.717948718 0.970036777 0 0.24137931 0.435897436 22 9 2 28 chr11:134022402-134022429 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 996267 996288 intron WNK1 Ensembl G3299.1 TCTTAACTATATATATTTTAT 4 2 2 44 0.75 0.477121255 0.25 0 0 4 1 0 3 chr12:996267-996288 minimal NA NA NA UAUU minimal chr1 + 90181183 90181204 3'utr LRRC8C Ensembl G330.1 CCTTTATCATTTAACTTATTT 4 2 4 44 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr1:90181183-90181204 minimal NA NA AUUUA UAUU minimal chr12 + 1309701 1309725 intron ERC1 Ensembl G3302.1 CTATCTAATCATCTCACATTTCCT 4 2 2 34 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr12:1309701-1309725 NA NA NA NA NA NA chr12 + 1310021 1310066 intron ERC1 Ensembl G3303.1 CCCACATTTCCTTTTCTTACCATTGCCCATAATATTCAGACCCTT 20 10 20 169 0.869565217 0.698970004 0.304347826 0.25 0.47826087 12 0 3 20 chr12:1310021-1310066 NA NA NA NA UAUU minimal chr12 + 1310072 1310149 repeat Simple_repeat-(TA)n RepeatMasker G3304.1 TTAAAAAGAGAGATTCAGTAGTCTCCCATACCTTGATATTATATTGAAAATATTTTTATATTTCTTTTATATGTACA 88 21 67 1029 0.72826087 1.127104798 0.282608696 0.314814815 0.597826087 37 21 4 67 chr12:1310072-1310149 minimal NA NA NA UAUU minimal chr12 + 1310156 1310209 repeat Simple_repeat-(TA)n RepeatMasker G3305.1 TTTACACATGTACATGTTTATATATGCATACATATATATTTGCACGTTTTTCC 32 10 24 301 0.727272727 1.079181246 0.212121212 0.25 0.454545455 18 8 1 24 chr12:1310156-1310209 minimal NA NA NA UAUU minimal chr12 + 1310214 1310270 intron ERC1 Ensembl G3306.1 TAAAAATGTAAGTACATTCATCTGCCTATATTCTTATACAATTTAATATAATTCAG 817 17 732 8452 0.862190813 1.345997141 0.004711425 0.554140127 0.917550059 70 85 32 732 chr12:1310214-1310270 minimal NA NA AUUUA UAUU minimal chr12 + 1310270 1310339 intron ERC1 Ensembl G3307.1 TTGAATTACTTTTAGATTTGTAGATTAAACAAAAGTGTAGATAACTTTCCCTTTCTCCTTTTTGTCACA 90 20 76 930 0.817204301 1.278753601 0.290322581 0.425925926 0.666666667 31 14 3 76 chr12:1310270-1310339 NA NA NA NA NA NA chr12 + 1310431 1310503 repeat DNA-MER104 RepeatMasker G3309.1 TATAACTTTTTTTCTTTCTCAGTAATATAAAATACTTTTTACTATGATGTGTCTTCTATCCTTGGTGAATTG 245 25 220 2491 0.887096774 1.740362689 0.286290323 0.579710145 0.883064516 29 25 3 220 chr12:1310431-1310503 NA NA NA NA NA NA chr12 + 1310554 1310677 repeat DNA-Kanga2_a RepeatMasker G3310.1 AGTAGGAGAAAGTAGTATTTCTAAATTAATATTATTTTGTCATATATTTCATTTTAAATGTACGTGTAGTAACCAAGTGAATGTATTTACTAGTATAAATTGTAAATTAGATATTTGACGGGT 1074 29 972 11992 0.903435469 2.386052849 0.361188487 0.595854922 0.927576602 78 101 3 973 chr12:1310554-1310677 minimal NA NA AUUUA UAUU minimal chr12 + 1310721 1310742 repeat DNA-Kanga2_a RepeatMasker G3311.1 TTTCTTTTGGACCATCTCCTT 4 2 3 33 0.75 0.477121255 0.25 0 0 4 1 0 3 chr12:1310721-1310742 NA NA NA NA NA NA chr12 + 1310753 1310791 repeat DNA-Kanga2_a RepeatMasker G3311.2 CTTTATGATATTACTTTATGTTAGTATCCCATTATATT 333 3 323 3340 0.967261905 1.90982337 0.00297619 0.6 0.976190476 8 8 3 325 chr12:1310753-1310791 minimal NA NA NA UAUU minimal chr12 + 1310804 1310877 intron ERC1 Ensembl G3312.1 CATAGTGTAACCCGGAAATGTAAACCTAGGTATTTAGTCTTTATTCTGGTAAATATTTTTCCTTAAATTTTGA 314 14 279 3647 0.880126183 1.843544212 0.277602524 0.72 0.955835962 14 35 3 279 chr12:1310804-1310877 minimal NA NA AUUUA UAUU minimal chr12 + 1310986 1311013 intron ERC1 Ensembl G3314.1 AAAAATATTCTTACTTTTAAATTTATG 30 8 27 326 0.9 1.431363764 0.266666667 0.333333333 0.533333333 14 3 0 27 chr12:1310986-1311013 minimal NA NA AUUUA UAUU minimal chr12 + 1312520 1312542 intron ERC1 Ensembl G3318.1 CCCGGCTGCTACATTCTTATTC 5 3 4 36 0.714285714 0.22184875 0.142857143 0.166666667 0.285714286 5 0 2 5 chr12:1312520-1312542 minimal NA NA NA UAUU minimal chr12 + 1312631 1312653 intron ERC1 Ensembl G3319.1 TCCTTCTTATCTGTTTTTATTC 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:1312631-1312653 minimal NA NA NA UAUU minimal chr1 + 90183333 90183355 3'utr LRRC8C Ensembl G332.1 ATATTTATCTAACCACTTTCCG 2 2 2 16 1 0.301029996 0.5 0 0 2 0 0 2 chr1:90183333-90183355 minimal NA NA AUUUA UAUU minimal chr12 + 1313344 1313369 intron ERC1 Ensembl G3322.1 CTAACCTTCTCTATTTTTCTTAGTG 99 8 86 1115 0.868686869 1.934498451 0.666666667 0.625 0.909090909 9 13 0 86 chr12:1313344-1313369 NA NA NA NA UAUU minimal chr12 + 1313438 1313460 intron ERC1 Ensembl G3323.1 AAACTTTCATTAAAATACAATG 4 2 4 24 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr12:1313438-1313460 NA NA NA NA NA NA chr12 + 1313533 1313564 intron ERC1 Ensembl G3324.1 AATTTGTGACTCCTTCCCTTCTCTAATCCTG 7 4 7 54 0.875 0.544068044 0.625 0.142857143 0.25 6 0 1 7 chr12:1313533-1313564 NA NA NA NA NA NA chr12 + 1350801 1350822 intron ERC1 Ensembl G3327.1 AATTTATTTAACTTAACTTAC 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr12:1350801-1350822 minimal NA NA AUUUA UAUU minimal chr12 + 1361135 1361158 intron ERC1 Ensembl G3328.1 ATTCTTTTTTTTCTTAAATTTTA 3 2 3 45 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr12:1361135-1361158 NA NA NA NA NA NA chr1 + 90399132 90399153 coding LRRC8D Ensembl G333.1 CTCTTATACATACTATTATTC 8 3 7 73 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr1:90399132-90399153 minimal NA NA NA UAUU minimal chr12 + 1461075 1461097 intron ERC1 Ensembl G3334.1 AATATTTAAACACATATTATTT 4 2 4 36 1 0.602059991 0 0.5 0.75 1 0 0 4 chr12:1461075-1461097 minimal NA NA AUUUA UAUU minimal chr12 + 1895537 1895563 3'utr ADIPOR2 Ensembl G3336.1 ATCCATATCATATTTATTTGTAGAAG 17 4 16 165 0.941176471 1.204119983 0.411764706 0.444444444 0.705882353 5 1 0 16 chr12:1895537-1895563 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 1897675 1897702 3'utr ADIPOR2 Ensembl G3337.1 TATTTTCCCTCTTCCCCTTTATAAATT 3 3 3 37 1 0.477121255 0.333333333 0 0 3 0 0 3 chr12:1897675-1897702 minimal NA NA NA UAUU minimal chr12 + 2957069 2957095 NoAnnotation G3339.1 CTACATAATATTCTATCTACTTATTA 4 2 2 45 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr12:2957069-2957095 minimal NA NA NA UAUU minimal chr12 + 4410943 4410972 repeat Low_complexity-AT_rich RepeatMasker G3344.1 CTATTTTATAAACATTTTTATAATATATT 31 8 29 358 0.935483871 1.462397998 0 0.388888889 0.64516129 11 2 0 29 chr12:4410943-4410972 minimal NA NA NA UAUU minimal chr12 + 4462287 4462310 3'utr C12orf5 Ensembl G3346.1 TTATATTTTTAAATCCTTTAAAT 4 2 2 40 0.75 0.477121255 0 0 0 4 1 0 3 chr12:4462287-4462310 minimal NA NA NA UAUU minimal chr12 + 4463787 4463828 NoAnnotation G3347.1 ATATATATAGATCTAGTTAATTATAACCACTCTATTCTATT 8 4 5 85 0.625 0.698970004 0 0.166666667 0.375 5 3 0 5 chr12:4463787-4463828 minimal NA NA NA UAUU minimal chr1 + 90493546 90493580 3'utr ZNF326 Ensembl G335.1 TATTGTTAGTATATCTATTCTAATCATTTTATCT 14 7 11 161 0.785714286 1.041392685 0 0.272727273 0.428571429 8 3 0 11 chr1:90493546-90493580 minimal NA NA NA UAUU minimal chr1 + 90494003 90494024 3'utr ZNF326 Ensembl G336.1 ACCTTATTTATACTCTTTTTA 6 2 4 62 0.666666667 0.602059991 0 0.25 0.5 3 2 0 4 chr1:90494003-90494024 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 7051374 7051415 repeat Low_complexity-AT_rich RepeatMasker G3360.1 CCCCTTCCCCACACTAATAATTTATATATATAAATATCTAT 118 9 95 896 0.748031496 0.977723605 0 0.344827586 0.700787402 38 23 9 95 chr12:7051374-7051415 minimal NA NA AUUUA NA minimal chr12 + 7053021 7053041 snRNA snRNA-U7 RepeatMasker G3361.1 CTTTTTACCGGAAAGCCCCT 7 3 4 38 0.571428571 0.602059991 0 0.5 0.714285714 2 3 0 4 chr12:7053021-7053041 NA NA NA NA NA NA chr12 + 8205649 8205679 repeat Simple_repeat-(TTA)n RepeatMasker G3365.1 TTTTTTCCTAGTTCTTTTATTATTATTCTT 4 2 3 60 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr12:8205649-8205679 minimal NA NA NA UAUU minimal chr12 + 8249011 8249040 3'utr NECAP1 Ensembl G3367.1 TCTCATCTTTTAATTTCTTTAACTTATTT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr12:8249011-8249040 minimal NA NA NA UAUU minimal chr1 + 91973298 91973319 intron CDC7 Ensembl G337.1 TATAATTAATTACTCATATTT 4 3 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:91973298-91973319 NA NA NA NA UAUU minimal chr12 + 12795405 12795429 3'utr CREBL2 Ensembl G3377.1 ACCTAATCTTATTTTTATTTACTT 6 5 6 71 1 0.77815125 0.166666667 0.2 0.333333333 4 0 0 6 chr12:12795405-12795429 minimal NA NA AUUUA UAUU minimal chr12 + 12795499 12795527 3'utr CREBL2 Ensembl G3378.1 TATTAACAAATATATACATTTCTATTTT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr12:12795499-12795527 NA NA NA NA UAUU minimal chr1 + 91981505 91981525 intron CDC7 Ensembl G338.1 TCTATTTATAACTAATATTT 3 2 3 30 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr1:91981505-91981525 minimal NA NA AUUUA UAUU minimal chr12 + 12875054 12875078 3'utr CDKN1B Ensembl G3382.1 AAAAATTATACTAACTTATTTATG 45 8 43 368 0.914893617 1.156347201 0.340425532 0.4 0.680851064 15 2 2 43 chr12:12875054-12875078 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 12942043 12942064 repeat Low_complexity-AT_rich RepeatMasker G3384.1 TAATTTAATTTTTAATTATTG 4 4 4 48 1 0.602059991 1 0 0 4 0 0 4 chr12:12942043-12942064 minimal NA NA AUUUA UAUU minimal chr12 + 12942690 12942713 3'utr APOLD1 Ensembl G3386.1 CCTCTGTTACTTAATTATTTAAT 12 4 11 113 0.916666667 1.041392685 0 0.5 0.75 3 1 0 11 chr12:12942690-12942713 minimal NA NA AUUUA UAUU minimal chr12 + 12976220 12976242 coding DDX47 Ensembl G3388.1 CAATATTATATTTTTATTCCCT 4 3 4 44 1 0.602059991 0 0 0 4 0 0 4 chr12:12976220-12976242 minimal NA NA NA UAUU minimal chr12 + 12982883 12982907 repeat Low_complexity-AT_rich RepeatMasker G3389.1 AAACAATAAATTTAAATATTATTT 6 3 4 52 0.833333333 0.698970004 0 0 0 6 1 0 5 chr12:12982883-12982907 minimal NA NA AUUUA UAUU minimal chr12 + 12993218 12993238 NoAnnotation G3390.1 TATTTAACCCATCCATTTCT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr12:12993218-12993238 minimal NA NA AUUUA UAUU minimal chr12 + 14521039 14521062 intron ATF7IP Ensembl G3391.1 TATTTAAATATTTTTAAACTTAT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr12:14521039-14521062 minimal NA NA AUUUA UAUU minimal chr12 + 14521240 14521260 intron ATF7IP Ensembl G3392.1 ATTTTCCCATTTCATTATTC 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr12:14521240-14521260 minimal NA NA NA UAUU minimal chr12 + 14581850 14581872 intron ATF7IP Ensembl G3396.1 TTATAACTAATACTCACTAATT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr12:14581850-14581872 minimal NA NA NA NA NA chr12 + 14615942 14615965 repeat Low_complexity-AT_rich RepeatMasker G3397.1 ACTTTATTAATAAATTATTACTT 3 2 3 32 1 0.477121255 0.333333333 0 0 3 0 0 3 chr12:14615942-14615965 minimal NA NA NA UAUU minimal chr12 + 14619736 14619756 intron ATF7IP Ensembl G3398.1 TAATAATTAGTTTATTCTAT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr12:14619736-14619756 minimal NA NA NA UAUU minimal chr12 + 14653632 14653664 repeat Low_complexity-AT_rich RepeatMasker G3402.1 ATGAACATTTTTATTTATATTTACTAATCTTT 14 7 12 176 0.857142857 1.079181246 0 0.166666667 0.285714286 10 2 0 12 chr12:14653632-14653664 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 14654461 14654482 NoAnnotation G3404.1 TAACTATATCCTTCTATTTCT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:14654461-14654482 NA NA NA NA UAUU minimal chr12 + 14655391 14655427 NoAnnotation G3408.1 TTTTTTATTTGTAGAGTCAGCTAAGTACCCATATTT 8 3 8 78 1 0.903089987 0 0.333333333 0.75 2 0 0 8 chr12:14655391-14655427 minimal NA NA NA UAUU minimal chr12 + 14655595 14655616 NoAnnotation G3409.1 CATCCTAATTTTTCTTTATTG 18 6 18 198 1 1.255272505 0.611111111 0.625 0.833333333 3 0 0 18 chr12:14655595-14655616 minimal NA NA NA UAUU minimal chr1 + 92786206 92786232 intron RPAP2 Ensembl G341.1 TATCATTTACCATTTATATATTTATG 4 3 4 44 1 0.602059991 0.25 0 0 4 0 0 4 chr1:92786206-92786232 minimal NA NA AUUUA UAUU minimal chr12 + 14928947 14928968 3'utr H2AFJ Ensembl G3410.1 ACACTCCTATTTATTTCATCC 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr12:14928947-14928968 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 16056168 16056190 3'utr STRAP Ensembl G3413.1 CCAACATCCAATTTCTATTATT 3 3 3 22 1 0.477121255 0 0 0 3 0 0 3 chr12:16056168-16056190 minimal NA NA NA UAUU minimal chr12 + 16063065 16063089 NoAnnotation G3414.1 TATACAAATATTACTATTCCTATT 5 3 5 46 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:16063065-16063089 NA NA NA NA UAUU minimal chr12 + 19371931 19371954 intron PLEKHA5 Ensembl G3416.1 TTACAAATAATTATTATTTATTG 3 2 3 31 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr12:19371931-19371954 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 19670819 19670843 intron AEBP2 Ensembl G3417.1 CTACATTTAAAACTTTTATTAAAC 5 4 5 45 1 0.698970004 0 0 0 5 0 0 5 chr12:19670819-19670843 minimal NA NA AUUUA UAUU minimal chr12 + 19671780 19671802 3'utr AEBP2 Ensembl G3418.1 TTAATATTTACCTATATAACTA 5 4 5 43 1 0.698970004 0 0 0 5 0 0 5 chr12:19671780-19671802 minimal NA NA AUUUA UAUU minimal chr12 + 19671841 19671866 3'utr AEBP2 Ensembl G3419.1 AATAATCTTCATATTTTCATTTAAC 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:19671841-19671866 minimal NA NA AUUUA UAUU minimal chr12 + 19674550 19674571 NoAnnotation G3420.1 ACAATAATTATCTCTCAATAT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr12:19674550-19674571 minimal NA NA NA NA NA chr12 + 20704378 20704441 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G3424.1 ATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTG 2796 19 147 22908 0.041385135 -0.711778545 0.643862613 0.347619048 0.845720721 548 2649 756 147 chr12:20704378-20704441 NA NA NA NA NA NA chr12 + 20704447 20704474 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G3424.2 TAATTCCGATAACGAACGAGACTCTGG 102 3 6 360 0.031578947 -1.171238756 0.378947368 0.312 0.547368421 86 96 88 6 chr12:20704447-20704474 NA NA NA NA NA NA chr12 + 20704474 20704500 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G3424.3 CATGCTAACTAGTTACGCGACCCCCG 303 4 5 1218 0.013623978 -1.113943352 0.841961853 0.284313725 0.801089918 73 298 64 5 chr12:20704474-20704500 NA NA NA NA NA NA chr12 + 21670507 21670528 3'utr GOLT1B Ensembl G3425.1 TATTTAACTCCTTTGTAGACA 5 2 4 41 0.8 0.602059991 0.2 0.25 0.4 3 1 0 4 chr12:21670507-21670528 minimal NA NA AUUUA UAUU minimal chr12 + 22797368 22797391 repeat Low_complexity-AT_rich RepeatMasker G3427.1 TTCATTATTTAATTTAATATATT 3 3 3 35 1 0.477121255 0.333333333 0 0 3 0 0 3 chr12:22797368-22797391 minimal NA NA AUUUA UAUU minimal chr12 + 22819370 22819396 intron ETNK1 Ensembl G3430.1 ACTAACTTCAAATCTAATATTTTAAT 3 2 3 28 1 0.477121255 0 0 0 3 0 0 3 chr12:22819370-22819396 NA NA NA NA UAUU minimal chr12 + 26224575 26224600 3'utr RASSF8 Ensembl G3439.1 TCTTGATGCACAGGGACTTTTTTAT 3 2 3 22 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr12:26224575-26224600 minimal NA NA NA NA NA chr12 + 26225253 26225273 3'utr RASSF8 Ensembl G3440.1 ACAAAACAATCACTATTTAT 3 2 3 15 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:26225253-26225273 minimal NA NA AUUUA UAUU minimal chr12 + 26324989 26325009 intron SSPN Ensembl G3441.1 CTCTTATAATTTCATTTTAT 21 2 4 248 0.19047619 0.602059991 0 0.333333333 0.80952381 4 17 0 4 chr12:26324989-26325009 minimal NA NA NA NA NA chr12 + 27475572 27475595 repeat Low_complexity-AT_rich RepeatMasker G3444.1 CTCTTTTTTTTAATATTTTATTA 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:27475572-27475595 minimal NA NA NA UAUU minimal chr12 + 27477201 27477225 3'utr STK38L Ensembl G3445.1 ACTAACTCTAATTTTTCTAATTAT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:27477201-27477225 minimal NA NA NA NA NA chr12 + 27951772 27951796 3'utr KLHDC5 Ensembl G3449.1 ATAAAACCTCTTATTTTATTTATG 11 7 10 113 0.909090909 1 0.363636364 0 0 11 1 0 10 chr12:27951772-27951796 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 28702492 28702514 3'utr CCDC91 Ensembl G3454.1 TAACCATACATTTATCTTATTT 4 3 4 39 1 0.602059991 0.25 0 0 4 0 0 4 chr12:28702492-28702514 minimal NA NA AUUUA UAUU minimal chr12 + 32794119 32794146 repeat Low_complexity-AT_rich RepeatMasker G3457.1 TTCACATTCATCTCTAATTTATTTTTT 5 4 5 61 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:32794119-32794146 minimal NA NA AUUUA UAUU minimal chr12 + 34184492 34184514 NoAnnotation G3460.1 CCATATACTCATAATATTTATG 3 3 3 24 1 0.477121255 1 0 0 3 0 0 3 chr12:34184492-34184514 minimal NA NA AUUUA UAUU minimal chr12 + 34185242 34185264 NoAnnotation G3462.1 TTAATTATTTTTTATATAGGGT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:34185242-34185264 minimal NA NA NA UAUU minimal chr12 + 34185380 34185403 NoAnnotation G3463.1 TCAAAACTAATATTTAATATTTG 7 4 7 61 1 0.84509804 0.714285714 0.4 0.571428571 3 0 0 7 chr12:34185380-34185403 minimal NA NA AUUUA UAUU minimal chr12 + 34187096 34187118 NoAnnotation G3465.1 AATTAAACTCTTTTATTTTTTA 8 4 6 98 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr12:34187096-34187118 minimal NA NA NA UAUU minimal chr12 + 34356834 34356856 rRNA rRNA-5S RepeatMasker G3467.1 AATGCCGGGTGCTGTAGGCTTT 69 2 2 428 0.026666667 -0.544068044 0 0.272727273 0.893333333 8 67 6 2 chr12:34356834-34356856 NA NA NA NA NA NA chr12 + 34358726 34358753 rRNA rRNA-5S RepeatMasker G3468.1 ACTGGGAATACCGGGTGCTGTAGGCTT 81 4 6 536 0.065217391 -0.301029996 0.065217391 0.285714286 0.836956522 15 75 11 6 chr12:34358726-34358753 NA NA NA NA NA NA chr12 + 38717281 38717302 NoAnnotation G3472.1 AACTCATCTTTTAACATAATT 4 3 3 32 1 0.602059991 0.25 0 0 4 0 0 4 chr12:38717281-38717302 NA NA NA NA NA NA chr12 + 38718295 38718324 NoAnnotation G3473.1 CTATTTTCAACTATTTATTATTTTAAAAC 7 6 6 89 0.857142857 0.77815125 0 0 0 7 1 0 6 chr12:38718295-38718324 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 38719648 38719670 NoAnnotation G3475.1 CCATATACTCATAATATTTATA 4 2 3 33 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr12:38719648-38719670 minimal NA NA AUUUA UAUU minimal chr12 + 38720629 38720651 NoAnnotation G3476.1 TCAACACTAATATTTAATATTT 12 6 9 108 0.75 0.954242509 0.333333333 0.333333333 0.5 6 3 0 9 chr12:38720629-38720651 minimal NA NA AUUUA UAUU minimal chr12 + 38722408 38722435 NoAnnotation G3478.1 ATTTATAATCATTTATATCTATTTATC 5 5 5 69 1 0.698970004 0 0 0 5 0 0 5 chr12:38722408-38722435 minimal NA NA AUUUA UAUU minimal chr12 + 45826033 45826059 repeat Low_complexity-AT_rich RepeatMasker G3497.1 CATTTTAATATTCTTTTATAATTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr12:45826033-45826059 minimal NA NA NA UAUU minimal chr12 + 46265462 46265491 intron ARID2 Ensembl G3499.1 AATTTATATCATTCCTTCCTTTAATTATT 4 3 3 46 0.75 0.477121255 0 0 0 4 1 0 3 chr12:46265462-46265491 minimal NA NA AUUUA UAUU minimal chr1 + 93310283 93310303 NoAnnotation G350.1 CCTAATTATTTTATCCTATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr1:93310283-93310303 minimal NA NA NA UAUU minimal chr12 + 46299229 46299250 3'utr ARID2 Ensembl G3500.1 CATTAAATATTTTTATCTATA 4 3 4 40 1 0.602059991 0 0 0 4 0 0 4 chr12:46299229-46299250 minimal NA NA NA UAUU minimal chr12 + 46299417 46299441 3'utr ARID2 Ensembl G3501.1 CCAATATATTTTCACTTATTTATT 13 5 11 149 0.733333333 0.56427143 0 0.5 0.733333333 4 2 2 11 chr12:46299417-46299441 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 50837706 50837730 intron LARP4 Ensembl G3509.1 TTTTAATTATCATCATTTTATAAT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr12:50837706-50837730 minimal NA NA NA NA NA chr12 + 50870067 50870090 3'utr LARP4 Ensembl G3511.1 AAATTACTTTTTTTAATCTATTT 9 6 9 114 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr12:50870067-50870090 NA NA NA NA UAUU minimal chr12 + 50870295 50870315 3'utr LARP4 Ensembl G3512.1 ACCTTACTAATATTTCATTT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:50870295-50870315 NA NA NA NA UAUU minimal chr12 + 50870817 50870838 3'utr LARP4 Ensembl G3513.1 CTTAATTTGGGAGGGGGGACT 2 2 2 10 1 0.301029996 0 0 0 2 0 0 2 chr12:50870817-50870838 NA NA NA NA NA NA chr12 + 50873110 50873154 3'utr LARP4 Ensembl G3516.1 ATTCCTTCTGAGGGGCTTTTATAAATTATTAACTATAATATATG 6 5 5 69 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 chr12:50873110-50873154 minimal NA NA NA UAUU minimal chr12 + 51140109 51140148 3'utr DIP2B Ensembl G3519.1 TAAATATTTATTTAGACTATTTTAATAATACATATTATT 4 4 4 43 1 0.602059991 0 0 0 4 0 0 4 chr12:51140109-51140148 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 93314210 93314235 repeat LINE-L2a RepeatMasker G352.1 TCTAAAATTATCATATTTATTTATT 3 3 3 34 1 0.477121255 0 0 0 3 0 0 3 chr1:93314210-93314235 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 51635203 51635225 intron DAZAP2 Ensembl G3523.1 CATTTACCATTTACTTAATATT 5 4 4 51 0.8 0.602059991 0 0 0 5 1 0 4 chr12:51635203-51635225 minimal NA NA AUUUA UAUU minimal chr12 + 51637606 51637633 intron DAZAP2 Ensembl G3524.1 ATTTCTTCTATATATATTTTATTTATA 3 2 2 47 1 0.477121255 0 0 0 3 0 0 3 chr12:51637606-51637633 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 52453240 52453261 repeat Low_complexity-AT_rich RepeatMasker G3529.1 ATTAATATATTTAATATATTG 6 3 6 60 1 0.77815125 1 0.666666667 0.833333333 1 0 0 6 chr12:52453240-52453261 minimal NA NA AUUUA UAUU minimal chr12 + 53410077 53410101 intron EIF4B Ensembl G3531.1 CAACTTTTAAATTTCTTATTTATG 3 3 3 36 1 0.477121255 1 0 0 3 0 0 3 chr12:53410077-53410101 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 53805426 53805451 repeat Simple_repeat-(TA)n RepeatMasker G3533.1 ATTCTATATTATTATATATATATAT 24 8 17 290 0.653846154 0.753327667 0 0.2 0.384615385 16 7 2 17 chr12:53805426-53805451 minimal NA NA NA UAUU minimal chr12 + 53807693 53807717 NoAnnotation G3536.1 AATTTATATCTAATTATTTCCACT 4 2 3 45 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:53807693-53807717 minimal NA NA AUUUA UAUU minimal chr12 + 53808341 53808372 NoAnnotation G3537.1 ATTTATTTCTACTATATACATATATATTTTT 13 7 10 164 0.714285714 0.698970004 0 0.272727273 0.428571429 8 3 1 10 chr12:53808341-53808372 minimal NA NA AUUUA UAUU minimal chr1 + 93587732 93587754 repeat Low_complexity-AT_rich RepeatMasker G354.1 TTTTTATAATTATCTTAATATT 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:93587732-93587754 minimal NA NA NA UAUU minimal chr12 + 54526476 54526498 lincRNA RP11-834C11.4 Ensembl G3545.1 TTCATTCCACTAATATTTATCT 10 4 9 99 0.9 0.954242509 0 0.428571429 0.6 4 1 0 9 chr12:54526476-54526498 minimal NA NA AUUUA UAUU minimal chr12 + 54679320 54679347 3'utr HNRNPA1 Ensembl G3546.1 TTCTATCAGTTAACTATACTAATTAAT 3 3 3 25 1 0.477121255 0.666666667 0 0 3 0 0 3 chr12:54679320-54679347 NA NA NA NA NA NA chr12 + 54680123 54680146 3'utr HNRNPA1 Ensembl G3547.1 TTAAACATTTTTCTTAATATATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr12:54680123-54680146 NA NA NA NA UAUU minimal chr12 + 54742079 54742100 repeat LINE-L2a RepeatMasker G3550.1 ACATTTAATACATACTTATTT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr12:54742079-54742100 minimal NA NA AUUUA UAUU minimal chr12 + 56366324 56366346 3'utr CDK2 Ensembl G3555.1 AACAATTATATTTATATTTCAG 5 3 5 45 1 0.698970004 0.8 0.25 0.4 3 0 0 5 chr12:56366324-56366346 minimal NA NA AUUUA UAUU minimal chr12 + 56387136 56387157 3'utr RAB5B Ensembl G3556.1 CTTCCTCCAACTCTAATTATT 7 4 6 57 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr12:56387136-56387157 minimal NA NA NA UAUU minimal chr12 + 56429390 56429412 3'utr IKZF4 Ensembl G3557.1 CCTTTTTAAATTTTAACTTATA 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr12:56429390-56429412 minimal NA NA NA NA NA chr1 + 93604011 93604033 3'utr MTF2 Ensembl G356.1 TACTTATTTATTCCATTAATTG 15 5 14 158 0.933333333 1.146128036 0.533333333 0.272727273 0.466666667 8 1 0 14 chr1:93604011-93604033 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 57923349 57923369 3'utr MBD6 Ensembl G3564.1 ACTCTTTTATATTTAATTCG 4 2 4 40 1 0.602059991 1 0.5 0.75 1 0 0 4 chr12:57923349-57923369 minimal NA NA AUUUA UAUU minimal chr12 + 62791737 62791760 intron USP15 Ensembl G3573.1 ATTTATACTTTATATTATTATTA 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr12:62791737-62791760 minimal NA NA AUUUA UAUU minimal chr1 + 93604381 93604403 3'utr MTF2 Ensembl G358.1 TATCATATTATTTCATTTTCCC 6 3 4 68 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr1:93604381-93604403 minimal NA NA NA UAUU minimal chr12 + 64815195 64815216 coding XPOT Ensembl G3583.1 ATATTTCTTCTAATATTATTG 6 6 6 66 1 0.77815125 1 0 0 6 0 0 6 chr12:64815195-64815216 minimal NA NA NA UAUU minimal chr12 + 64842414 64842436 repeat Low_complexity-AT_rich RepeatMasker G3584.1 TTATACTTTTTTTTATATATAT 7 3 5 98 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr12:64842414-64842436 minimal NA NA NA NA NA chr12 + 64842503 64842524 3'utr XPOT Ensembl G3585.1 TTTTATTTTCTCATCTTAATC 5 2 2 60 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr12:64842503-64842524 minimal NA NA NA UAUU minimal chr12 + 64842990 64843015 repeat SINE-AluSz RepeatMasker G3586.1 AATTTAAAATCCCAATTTATTTTCT 3 2 2 29 0.5 0 0 0 0 4 1 1 2 chr12:64842990-64843015 minimal NA NA AUUUA UAUU minimal chr12 + 64854117 64854141 intron TBK1 Ensembl G3588.1 TAAAACTTCAATCTTATATTTATT 3 2 3 31 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr12:64854117-64854141 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 65616402 65616426 intron LEMD3 Ensembl G3599.1 ATTCATTAAATTCTCTATTTAATT 4 3 3 48 0.75 0.477121255 0 0 0 4 1 0 3 chr12:65616402-65616426 minimal NA NA AUUUA UAUU minimal chr12 + 65640754 65640775 3'utr LEMD3 Ensembl G3605.1 CTTTCCATTTTATTCATAATC 5 4 4 51 0.571428571 0.124938737 0 0 0 7 1 2 4 chr12:65640754-65640775 minimal NA NA NA UAUU minimal chr12 + 66529914 66529953 NoAnnotation G3607.1 CACTTAGTTTAGTTTATTTATCTATCTCATTTAATCCTT 54 9 44 663 0.8 1.342422681 0 0.545454545 0.818181818 10 10 1 44 chr12:66529914-66529953 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 93826982 93827012 3'utr DR1 Ensembl G361.1 TCCATCCATACTCATATTATTCAAATATAT 6 4 6 50 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:93826982-93827012 minimal NA NA NA UAUU minimal chr12 + 68054108 68054128 3'utr DYRK2 Ensembl G3614.1 TTCTTTAATAATAATCCTAC 6 2 2 52 0.333333333 0.301029996 0.833333333 0.333333333 0.666666667 2 4 0 2 chr12:68054108-68054128 NA NA NA NA NA NA chr12 + 69007298 69007320 intron RAP1B Ensembl G3619.1 TTACCATTTTATATTATTTATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr12:69007298-69007320 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 93827564 93827584 3'utr DR1 Ensembl G362.1 CCAAATCTTTTAAACTTATG 2 2 2 14 1 0.301029996 0.5 0 0 2 0 0 2 chr1:93827564-93827584 minimal NA NA NA NA NA chr12 + 69213629 69213649 intron MDM2 Ensembl G3628.1 ATTATAATCAAATTCCTATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr12:69213629-69213649 minimal NA NA NA UAUU minimal chr12 + 69224471 69224500 intron MDM2 Ensembl G3629.1 AATTATTATACCCTATTTATTTATTTATT 5 4 4 71 0.666666667 0.301029996 0.333333333 0 0 6 1 1 4 chr12:69224471-69224500 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 93828179 93828208 NoAnnotation G363.1 ATTTCTATTATTACCATTTTTACTATTTT 8 4 7 111 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr1:93828179-93828208 minimal NA NA NA UAUU minimal chr12 + 69233647 69233675 3'utr MDM2 Ensembl G3632.1 AATTATATATTTCTAACTATATAACCCT 17 6 14 168 0.823529412 1.146128036 0 0.230769231 0.411764706 10 3 0 14 chr12:69233647-69233675 minimal NA NA NA UAUU minimal chr12 + 69233726 69233762 3'utr MDM2 Ensembl G3633.1 CCTCAATTCACATAGATTTCTTCTCTTTAGTATAAT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:69233726-69233762 NA NA NA NA NA NA chr12 + 69233820 69233841 3'utr MDM2 Ensembl G3634.1 CTCATCCTTTACACCAACTCC 3 2 2 16 1 0.477121255 0 0 0 3 0 0 3 chr12:69233820-69233841 NA NA NA NA NA NA chr12 + 69236159 69236189 3'utr MDM2 Ensembl G3635.1 TTTCCTAAAAATCTCATTATCTATAACCAT 4 2 4 41 1 0.602059991 0 0.5 0.75 1 0 0 4 chr12:69236159-69236189 minimal NA NA NA NA NA chr12 + 69236584 69236605 3'utr MDM2 Ensembl G3636.1 ATTTTAATATTTCTTATTTTG 17 4 16 222 0.941176471 1.204119983 1 0.2 0.764705882 4 1 0 16 chr12:69236584-69236605 minimal NA NA NA UAUU minimal chr12 + 69645669 69645691 repeat Low_complexity-AT_rich RepeatMasker G3639.1 TATATTTATTTTTTATTAATAT 3 2 3 41 1 0.477121255 0 0 0 3 0 0 3 chr12:69645669-69645691 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 69663938 69663976 3'utr CPSF6 Ensembl G3641.1 ATTACATGGATATTTAATATTTCTATATTCTGCTTTTC 8 7 8 93 1 0.903089987 0.125 0.142857143 0.25 6 0 0 8 chr12:69663938-69663976 minimal NA NA AUUUA UAUU minimal chr12 + 69665273 69665305 3'utr CPSF6 Ensembl G3643.1 AAATTTTATACTAATTAAATCCTTTATTTACC 4 3 4 38 1 0.602059991 0 0 0 4 0 0 4 chr12:69665273-69665305 minimal NA NA AUUUA UAUU minimal chr12 + 69773719 69773745 intron YEATS4 Ensembl G3646.1 ATTCTTTTAATTTCCATTTATTTATT 3 3 3 48 1 0.477121255 0 0 0 3 0 0 3 chr12:69773719-69773745 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 93834168 93834188 NoAnnotation G365.1 CCATTAACTTCATATTTATG 3 3 3 24 1 0.477121255 1 0 0 3 0 0 3 chr1:93834168-93834188 minimal NA NA AUUUA UAUU minimal chr12 + 69970874 69970894 3'utr FRS2 Ensembl G3651.1 TACTTTATTCTTTCTTTCCG 4 2 2 46 0.5 0.301029996 1 0.333333333 0.5 2 2 0 2 chr12:69970874-69970894 minimal NA NA NA UAUU minimal chr12 + 69973254 69973282 3'utr FRS2 Ensembl G3657.1 CAACACATTTTTAAATCCTTATTTATTG 14 8 14 163 0.875 0.669006781 0.625 0.142857143 0.25 12 0 2 14 chr12:69973254-69973282 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 70242555 70242578 intron C12orf28 Ensembl G3658.1 TAACTAAAATACTTATTTTATTT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:70242555-70242578 minimal NA NA NA UAUU minimal chr12 + 70643141 70643166 repeat Low_complexity-AT_rich RepeatMasker G3659.1 ACTTTTATATACATTATCTTAATTT 3 3 3 37 1 0.477121255 0 0 0 3 0 0 3 chr12:70643141-70643166 minimal NA NA NA NA NA chr12 + 70674342 70674365 intron CNOT2 Ensembl G3662.1 ACACTTAATATTTTATATTTATT 5 2 4 61 0.8 0.602059991 0.4 0.666666667 0.8 1 1 0 4 chr12:70674342-70674365 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 93917190 93917211 repeat Low_complexity-AT_rich RepeatMasker G367.1 TTATTTTCATCATATTATTTA 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:93917190-93917211 minimal NA NA AUUUA UAUU minimal chr12 + 72072648 72072669 3'utr THAP2 Ensembl G3673.1 TTATTTTATCTTTATCTTAAG 2 2 2 23 1 0.301029996 1 0 0 2 0 0 2 chr12:72072648-72072669 minimal NA NA NA UAUU minimal chr12 + 72180072 72180107 3'utr RAB21 Ensembl G3676.1 TCTTCATTTATATTCTTTCAAATCAAATCTTTATT 7 5 7 74 0.875 0.544068044 0.125 0.166666667 0.375 5 0 1 7 chr12:72180072-72180107 minimal NA NA AUUUA UAUU minimal chr12 + 72180325 72180345 3'utr RAB21 Ensembl G3677.1 TAAATTACATATTAAATATT 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:72180325-72180345 NA NA NA NA UAUU minimal chr12 + 72279095 72279117 intron TBC1D15 Ensembl G3683.1 TTTACCTAATTTACCCTTTATT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr12:72279095-72279117 minimal NA NA AUUUA UAUU minimal chr12 + 72317830 72317852 3'utr TBC1D15 Ensembl G3684.1 TTTATTATCTTTCCTAATAATG 7 3 6 78 0.857142857 0.77815125 1 0.25 0.571428571 3 1 0 6 chr12:72317830-72317852 minimal NA NA NA UAUU minimal chr12 + 77220925 77220948 repeat Low_complexity-AT_rich RepeatMasker G3694.1 ATCTTAATTTATTTAAATAATTT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr12:77220925-77220948 minimal NA NA AUUUA UAUU minimal chr12 + 77247304 77247327 repeat Low_complexity-AT_rich RepeatMasker G3697.1 TTTTTATTTTATATTTTCTTTAT 4 3 3 68 0.5 0 0 0 0 6 1 2 3 chr12:77247304-77247327 minimal NA NA NA UAUU minimal chr12 + 82851910 82851932 intron C12orf26 Ensembl G3703.1 TTTATTAATATATTTATTAGTA 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:82851910-82851932 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 86092262 86092284 NoAnnotation G3709.1 ATACTTTATTTTCTTTCATATT 8 2 2 109 0.25 0.301029996 0 0.4 0.625 3 6 0 2 chr12:86092262-86092284 minimal NA NA NA UAUU minimal chr12 + 88443558 88443592 3'utr C12orf29 Ensembl G3714.1 ACTTCATTTATATTTTCCTTACTAATATCTAATA 24 11 24 303 0.923076923 0.903089987 0 0.181818182 0.307692308 18 0 2 24 chr12:88443558-88443592 minimal NA NA AUUUA UAUU minimal chr12 + 88579722 88579742 intron TMTC3 Ensembl G3715.1 TAATTTTTACATCTATATTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr12:88579722-88579742 NA NA NA NA UAUU minimal chr12 + 88589421 88589441 coding TMTC3 Ensembl G3716.1 AATAACATTAATATTTATCG 6 3 5 43 0.833333333 0.698970004 1 0.25 0.5 3 1 0 5 chr12:88589421-88589441 minimal NA NA AUUUA UAUU minimal chr12 + 88590461 88590487 repeat Low_complexity-AT_rich RepeatMasker G3717.1 TATATCTTTTTATTAAATATTTATTT 8 6 8 113 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr12:88590461-88590487 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 88590709 88590734 3'utr TMTC3 Ensembl G3719.1 TTACAAATTAAACTTACTAATTTAT 5 4 4 40 0.8 0.602059991 0 0 0 5 1 0 4 chr12:88590709-88590734 minimal NA NA AUUUA NA minimal chr12 + 88590843 88590888 3'utr TMTC3 Ensembl G3720.1 TAATTTCTAATTATATAGTATTTCAAAACTATATATTTTTTAGTT 7 4 5 92 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 5 2 0 5 chr12:88590843-88590888 minimal NA NA NA UAUU minimal chr12 + 88590896 88590917 3'utr TMTC3 Ensembl G3721.1 ATAACTAATTTCTAATTATAT 4 3 4 36 0.8 0.301029996 0.2 0.25 0.4 3 0 1 4 chr12:88590896-88590917 minimal NA NA NA NA NA chr12 + 88591372 88591393 repeat Low_complexity-AT_rich RepeatMasker G3722.1 TAATATTTTAATAAATTTATA 4 3 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr12:88591372-88591393 minimal NA NA AUUUA UAUU minimal chr12 + 93884038 93884059 intron MRPL42 Ensembl G3727.1 TTTAATCTTATTTACTTAATC 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr12:93884038-93884059 minimal NA NA AUUUA UAUU minimal chr12 + 93895096 93895121 3'utr MRPL42 Ensembl G3728.1 ATAAAATATCTTTTCATATATTAGA 6 2 4 61 0.666666667 0.602059991 0 0 0 6 2 0 4 chr12:93895096-93895121 NA NA NA NA UAUU minimal chr12 + 93897645 93897665 NoAnnotation G3730.1 TCATAATTTAATTAACTCCC 4 2 4 28 1 0.602059991 0.25 0.5 0.75 1 0 0 4 chr12:93897645-93897665 minimal NA NA AUUUA NA minimal chr12 + 95693815 95693841 intron VEZT Ensembl G3734.1 TTTTATTTAGCTTTTATTTATTTATT 7 2 6 112 0.857142857 0.77815125 0.142857143 0 0 7 1 0 6 chr12:95693815-95693841 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 95908805 95908830 3'utr METAP2 Ensembl G3738.1 AATTCTTATATTTAAATAATTTTAT 7 3 4 84 0.571428571 0.602059991 0.142857143 0.2 0.428571429 4 3 0 4 chr12:95908805-95908830 minimal NA NA AUUUA UAUU minimal chr12 + 96259858 96259887 3'utr SNRPF Ensembl G3740.1 TGGGGGATTTTTTTTATATATATTTCTAG 12 6 11 168 0.846153846 0.740362689 0.230769231 0.090909091 0.230769231 10 1 1 11 chr12:96259858-96259887 minimal NA NA NA UAUU minimal chr12 + 96764963 96764983 NoAnnotation G3743.1 TATTTCTAAATTAACATTAT 18 3 5 175 0.25 0.22184875 0 0.333333333 0.8 4 13 2 5 chr12:96764963-96764983 minimal NA NA NA UAUU minimal chr12 + 98928591 98928614 3'utr TMPO Ensembl G3755.1 CTCATATTTTCTTACTTTTCTTT 17 7 14 223 0.777777778 0.84509804 0.388888889 0.133333333 0.277777778 13 3 1 14 chr12:98928591-98928614 NA NA NA NA UAUU minimal chr12 + 98929220 98929252 3'utr TMPO Ensembl G3756.1 TACTCCCTCTGGCCATTACCACATTCTTAGAT 5 2 5 33 1 0.698970004 0.2 0.666666667 0.8 1 0 0 5 chr12:98929220-98929252 NA NA NA NA NA NA chr12 + 98943527 98943553 3'utr TMPO Ensembl G3759.1 ATTTCAATTAGCCTTATTCTAATATT 4 2 4 37 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr12:98943527-98943553 minimal NA NA NA UAUU minimal chr1 + 97216730 97216755 intron PTBP2 Ensembl G376.1 AATCTAATCACTTTTTCTATTTATT 4 2 4 48 0.8 0.301029996 0.2 0 0 5 0 1 4 chr1:97216730-97216755 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 98944030 98944068 3'utr TMPO Ensembl G3760.1 ATTAAATTGTAGATGTAGACTTTACAATATAATTCAAT 4 3 4 28 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:98944030-98944068 NA NA NA NA NA NA chr12 + 99045415 99045440 intron APAF1 Ensembl G3761.1 CAAAATTAGTAATTATTTATTTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:99045415-99045440 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 100618079 100618099 3'utr ACTR6 Ensembl G3764.1 TCATTCTTATTTATACATTC 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr12:100618079-100618099 UUAUUUAU NA NA AUUUA UAUU minimal chr12 + 100734033 100734059 3'utr SCYL2 Ensembl G3766.1 TTTAAATATTTTAATTTCTATTAGCC 4 3 4 51 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:100734033-100734059 NA NA NA NA UAUU minimal chr12 + 101019377 101019399 3'utr GAS2L3 Ensembl G3768.1 TAAACAATTTTTTATATTATCT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:101019377-101019399 minimal NA NA NA UAUU minimal chr12 + 104497321 104497342 3'utr HCFC2 Ensembl G3782.1 CTTTATTACCCCAATATCTTT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr12:104497321-104497342 minimal NA NA NA UAUU minimal chr12 + 104498809 104498830 NoAnnotation G3783.1 AATTTTAACTTACCTCATTAT 3 2 2 28 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr12:104498809-104498830 minimal NA NA NA NA NA chr12 + 105151850 105151879 repeat Low_complexity-AT_rich RepeatMasker G3785.1 CATTCCATAAATTCTAATTAATATTATTT 9 4 9 91 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr12:105151850-105151879 minimal NA NA NA UAUU minimal chr12 + 105562173 105562208 repeat Low_complexity-AT_rich RepeatMasker G3789.1 CTAAAGCATGCTGCATAATTAATAATTTATATTTT 6 4 5 60 0.833333333 0.698970004 0 0 0 6 1 0 5 chr12:105562173-105562208 minimal NA NA AUUUA UAUU minimal chr1 + 97255234 97255260 repeat Low_complexity-AT_rich RepeatMasker G379.1 TAATATTTATTAATTTATTATTAGAG 5 2 5 64 1 0.698970004 0.8 0.5 0.8 1 0 0 5 chr1:97255234-97255260 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 + 105571561 105571583 NoAnnotation G3791.1 TTTTAATTATTTACTATTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:105571561-105571583 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 14113697 14113720 3'utr PRDM2 Ensembl G38.1 CACTAATTTATAACTATTATATT 13 4 11 121 0.846153846 1.041392685 0.153846154 0.571428571 0.769230769 3 2 0 11 chr1:14113697-14113720 minimal NA NA AUUUA UAUU minimal chr1 + 97260524 97260545 intron PTBP2 Ensembl G380.1 AATTTAATATGGGAATTCTTA 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:97260524-97260545 minimal NA NA AUUUA NA minimal chr12 + 110784300 110784329 3'utr ATP2A2 Ensembl G3808.1 TTTAACTTAATCAATTAATTTTTTTATTG 15 8 13 199 0.866666667 1.113943352 0.133333333 0.25 0.4 9 2 0 13 chr12:110784300-110784329 minimal NA NA NA UAUU minimal chr12 + 112335244 112335267 NoAnnotation G3811.1 ATATTTCATTTTAATTATTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:112335244-112335267 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 112591339 112591374 3'utr TRAFD1 Ensembl G3812.1 TTTTTATTTTACTGTTATAATAATTATTAACTTCC 5 3 3 51 0.8 0.602059991 0.2 0 0 5 1 0 4 chr12:112591339-112591374 minimal NA NA NA UAUU minimal chr12 + 113633255 113633277 repeat Low_complexity-AT_rich RepeatMasker G3818.1 CTTCAAATACTTTTTAATTTAT 7 6 7 77 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr12:113633255-113633277 minimal NA NA AUUUA NA minimal chr1 + 97279430 97279452 3'utr PTBP2 Ensembl G382.1 TCACCTTTTTTTCTATTTAATC 5 3 4 58 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:97279430-97279452 minimal NA NA AUUUA UAUU minimal chr12 + 120878510 120878537 3'utr COX6A1 Ensembl G3822.1 CTTAAATAAATAACTTAAATTTAGATT 18 2 18 173 1 1.255272505 0 0.8 0.944444444 1 0 0 18 chr12:120878510-120878537 minimal NA NA AUUUA NA minimal chr12 + 120898874 120898894 3'utr AL021546.1 Ensembl G3823.1 AATTTCCCAATAATATTTAT 14 6 14 112 1 1.146128036 0.571428571 0.25 0.571428571 6 0 0 14 chr12:120898874-120898894 minimal NA NA AUUUA UAUU minimal chr12 + 120996325 120996349 repeat Low_complexity-AT_rich RepeatMasker G3825.1 ATAAATTTTATTTTTATTTTATTT 2 2 2 32 1 0.301029996 0 0 0 2 0 0 2 chr12:120996325-120996349 minimal NA NA NA UAUU minimal chr1 + 97284506 97284527 NoAnnotation G383.1 AAATACAGGCCTGCTATTATT 3 2 3 16 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:97284506-97284527 minimal NA NA NA UAUU minimal chr12 + 121861693 121861721 3'utr RNF34 Ensembl G3830.1 TTCTCTTATTTCCCCTTCATCCTATTTT 9 3 7 103 0.777777778 0.84509804 0 0.4 0.666666667 3 2 0 7 chr12:121861693-121861721 minimal NA NA NA UAUU minimal chr12 + 122499858 122499887 3'utr BCL7A Ensembl G3833.1 TATAATTTTTCACTTATTTATTCCATCAG 19 7 19 241 1 1.278753601 0.052631579 0.7 0.842105263 3 0 0 19 chr12:122499858-122499887 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 123892449 123892474 3'utr SETD8 Ensembl G3836.1 CCTTATATTACCAAAACTTTTATAT 10 4 7 87 0.636363636 0.544068044 0 0.1 0.181818182 9 3 1 7 chr12:123892449-123892474 minimal NA NA NA UAUU minimal chr12 + 124082444 124082468 repeat Low_complexity-AT_rich RepeatMasker G3837.1 TTTTATATAATTAATTTAAATTTG 4 4 4 44 1 0.602059991 0.5 0 0 4 0 0 4 chr12:124082444-124082468 minimal NA NA AUUUA NA minimal chr12 + 124498062 124498082 3'utr ZNF664 Ensembl G3841.1 ATTTTAGGTGACTCATAATT 2 2 2 11 1 0.301029996 0.5 0 0 2 0 0 2 chr12:124498062-124498082 NA NA NA NA NA NA chr12 + 125515610 125515634 3'utr BRI3BP Ensembl G3850.1 ATATATACATTCCTCTTATTTATT 7 5 6 85 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr12:125515610-125515634 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 127996877 127996898 repeat LINE-L1MEc RepeatMasker G3853.1 TTACTATTACTTATTACTATT 9 2 2 104 0.222222222 0.301029996 0 0.4 0.666666667 3 7 0 2 chr12:127996877-127996898 minimal NA NA NA UAUU minimal chr12 + 132416084 132416116 intron PUS1 Ensembl G3860.1 CATACCTAATTATTTATTTATTTATTTATTTT 31 9 15 451 0.483870968 1.176091259 0 0.25 0.516129032 15 16 0 15 chr12:132416084-132416116 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 + 133307768 133307789 repeat DNA-MER3 RepeatMasker G3865.1 CCTCAACTTTATTTAATATTT 3 2 3 30 0.6 0 0 0.666666667 0.8 1 0 2 3 chr12:133307768-133307789 minimal NA NA AUUUA UAUU minimal chr12 + 133588619 133588642 3'utr ZNF26 Ensembl G3867.1 TTCTATCTATCTATATATATATT 5 3 3 62 0.8 0.602059991 0 0 0 5 1 0 4 chr12:133588619-133588642 NA NA NA NA UAUU minimal chr12 + 133763854 133763878 intron ZNF268 Ensembl G3871.1 AATTTTTTTCCTAATTTATTTATT 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:133763854-133763878 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 1022008 1022040 3'utr RAD52 Ensembl G3875.1 CTACAATCTTCATTTAATATAAATAATTTATG 12 7 10 113 0.833333333 1 0 0.333333333 0.5 6 2 0 10 chr12:1022008-1022040 minimal NA NA AUUUA NA minimal chr12 - 1311879 1311915 NoAnnotation G3877.1 AACTTTAATTATTAATTTAATTTTTACCTACTTTAT 2 2 2 31 0.666666667 0 0 0 0 3 0 1 2 chr12:1311879-1311915 minimal NA NA AUUUA UAUU minimal chr12 - 1324001 1324021 repeat SINE-MIRb RepeatMasker G3879.1 TCTTATCTTTTTTATTTATG 6 4 6 78 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr12:1324001-1324021 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 1326026 1326048 NoAnnotation G3881.1 CAACACTCCCACTTCATTTAAT 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:1326026-1326048 minimal NA NA AUUUA NA minimal chr12 - 1326081 1326105 NoAnnotation G3882.1 TATATAACCTCTTCCTCTACCTCT 3 2 2 27 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:1326081-1326105 NA NA NA NA NA NA chr12 - 1330761 1330786 NoAnnotation G3883.1 TTTTATTTTCACGGAACCATATTCC 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:1330761-1330786 minimal NA NA NA UAUU minimal chr12 - 1331703 1331735 NoAnnotation G3884.1 TATATTACATATAAACATCTATAATATTTATA 11 5 7 108 0.636363636 0.84509804 0 0.1 0.181818182 9 4 0 7 chr12:1331703-1331735 minimal NA NA AUUUA UAUU minimal chr12 - 1332010 1332033 NoAnnotation G3885.1 TCTTTAACTTACTCCTTCCTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr12:1332010-1332033 NA NA NA NA UAUU minimal chr12 - 2967433 2967461 3'utr FOXM1 Ensembl G3889.1 TATAAATTCTCCAAATTATCCTCTAATT 10 5 8 83 0.8 0.903089987 0 0.25 0.4 6 2 0 8 chr12:2967433-2967461 minimal NA NA NA NA NA chr1 + 100548010 100548033 3'utr HIAT1 Ensembl G389.1 TTTTATTATACATCCTTTAATTA 15 7 14 178 0.875 0.84509804 0 0.454545455 0.625 6 1 1 14 chr1:100548010-100548033 minimal NA NA NA UAUU minimal chr12 - 4598693 4598723 3'utr C12orf4 Ensembl G3893.1 ATATTAGTAATCTAAAACTTTTTATTTATC 4 4 4 41 1 0.602059991 0 0 0 4 0 0 4 chr12:4598693-4598723 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 6601021 6601045 NoAnnotation G3895.1 TACTACTCTCATAAAATATTTATT 7 2 4 73 0.571428571 0.602059991 0 0.666666667 0.857142857 1 3 0 4 chr12:6601021-6601045 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 14113873 14113904 3'utr PRDM2 Ensembl G39.1 TATATTAATATCATTTATCCTTACATTTTAT 7 5 7 75 0.875 0.544068044 0 0.142857143 0.25 6 0 1 7 chr1:14113873-14113904 minimal NA NA AUUUA UAUU minimal chr12 - 6857638 6857662 3'utr MLF2 Ensembl G3900.1 ATTCCCATCCCCAATTTAATATTA 20 4 18 143 0.9 1.255272505 0 0.777777778 0.9 2 2 0 18 chr12:6857638-6857662 minimal NA NA AUUUA UAUU minimal chr12 - 7074526 7074547 3'utr PHB2 Ensembl G3901.1 AATTCTCAATAAATTTTTATT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:7074526-7074547 minimal NA NA NA UAUU minimal chr12 - 9549860 9549883 NoAnnotation G3906.1 TTTTTATATCTAAATATCTATTT 3 2 3 37 1 0.477121255 0 0 0 3 0 0 3 chr12:9549860-9549883 minimal NA NA NA UAUU minimal chr12 - 10556114 10556137 repeat DNA-Charlie5 RepeatMasker G3908.1 TTATTTACTTCTAATTAATTAAT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:10556114-10556137 minimal NA NA AUUUA UAUU minimal chr1 + 100548438 100548477 3'utr HIAT1 Ensembl G391.1 CTCAAATTTATTCCCCAGCTACTTCTTATACCACTATTC 3 2 2 23 1 0.477121255 0 0 0 3 0 0 3 chr1:100548438-100548477 minimal NA NA AUUUA UAUU minimal chr12 - 11047246 11047276 NoAnnotation G3913.1 ATTACTCTATCTTTAAATTTTATTAATATG 5 3 5 59 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr12:11047246-11047276 minimal NA NA NA UAUU minimal chr12 - 11166708 11166732 NoAnnotation G3915.1 ATTATCCATTTATATTATTTATTT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr12:11166708-11166732 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 11185306 11185330 NoAnnotation G3916.1 TAAATATTTTTTATAATAATATTT 2 2 2 25 0.666666667 0 0 0 0 3 0 1 2 chr12:11185306-11185330 minimal NA NA NA UAUU minimal chr12 - 11267296 11267317 NoAnnotation G3918.1 TTCACTATTTATTTCTTATTG 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr12:11267296-11267317 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 12269123 12269145 3'utr LRP6 Ensembl G3923.1 TATAATGGCCAACATTTGGTCA 6 2 3 37 0.5 0.477121255 0 0.666666667 0.833333333 1 3 0 3 chr12:12269123-12269145 NA NA NA NA NA NA chr12 - 12271001 12271021 3'utr LRP6 Ensembl G3924.1 TTACTTTAATTTTAATATAA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:12271001-12271021 NA NA NA NA NA NA chr12 - 12688230 12688262 intron DUSP16 Ensembl G3925.1 ATATTTATCTTCTTCTATGGGATATAGCCCAT 4 2 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:12688230-12688262 minimal NA NA AUUUA UAUU minimal chr12 - 14938900 14938921 NoAnnotation G3928.1 TAAACTCATCTACCAATTTAG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:14938900-14938921 minimal NA NA AUUUA NA minimal chr12 - 14939570 14939599 3'utr WBP11 Ensembl G3930.1 TTATTTTTAATATTTTCCTGTAAATATTT 4 3 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:14939570-14939599 minimal NA NA NA UAUU minimal chr12 - 22612236 22612265 intron KIAA0528 Ensembl G3942.1 CATCAATTAAACTAATATTTAAATTTTTT 6 4 5 53 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr12:22612236-22612265 minimal NA NA AUUUA UAUU minimal chr1 + 100614730 100614754 repeat Low_complexity-AT_rich RepeatMasker G395.1 ATTTTATTTAATATTTTTTATTTC 6 2 4 97 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr1:100614730-100614754 minimal NA NA AUUUA UAUU minimal chr12 - 26273252 26273276 3'utr BHLHE41 Ensembl G3961.1 CTCCATAAATTCTATTACCTAAAT 3 2 3 22 1 0.477121255 0 0 0 3 0 0 3 chr12:26273252-26273276 NA NA NA NA UAUU minimal chr12 - 29493289 29493315 3'utr ERGIC2 Ensembl G3968.1 TTTTTTAATCTAATCATTATATTATT 6 4 6 83 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr12:29493289-29493315 minimal NA NA NA UAUU minimal chr12 - 29494020 29494051 3'utr ERGIC2 Ensembl G3969.1 ACATAAAACCTTTTTTTAATAATAAAATATT 4 3 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:29494020-29494051 NA NA NA NA UAUU minimal chr12 - 31410599 31410619 NoAnnotation G3977.1 TTATACTAATTAACTCTTAT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:31410599-31410619 minimal NA NA NA NA NA chr12 - 32899978 32900004 3'utr YARS2 Ensembl G3981.1 TAACTTCATTATTTTTATGGGCCGGT 5 4 5 50 1 0.698970004 0 0 0 5 0 0 5 chr12:32899978-32900004 minimal NA NA NA UAUU minimal chr12 - 34372619 34372647 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G3983.1 AGGAACCGCAGGTTCAGACATTTTGTGT 132 3 12 570 0.050847458 -0.942008053 0.008474576 0.348484848 0.81779661 43 120 104 12 chr12:34372619-34372647 NA NA NA NA NA NA chr12 - 39046352 39046385 3'utr CPNE8 Ensembl G3985.1 CTTTATAATATTTTTTCCTTACCTATATATTCT 5 3 4 66 0.8 0.602059991 0 0 0 5 1 0 4 chr12:39046352-39046385 minimal NA NA NA UAUU minimal chr12 - 39687382 39687408 3'utr KIF21A Ensembl G3990.1 TATTTCCTTCCCTTTTATCTAATTTT 6 4 5 74 0.833333333 0.698970004 0 0 0 6 1 0 5 chr12:39687382-39687408 minimal NA NA NA UAUU minimal chr12 - 39834388 39834411 intron KIF21A Ensembl G3991.1 TCATTTATAACCATTATTTATTG 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr12:39834388-39834411 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 42477507 42477529 3'utr GXYLT1 Ensembl G3992.1 CAATAAATTACACCTATTTATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:42477507-42477529 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 42853021 42853046 3'utr PRICKLE1 Ensembl G3995.1 CTATTTATAACTTAGTATTTCATAG 10 2 10 102 1 1 0 0.25 0.7 3 0 0 10 chr12:42853021-42853046 minimal NA NA AUUUA UAUU minimal chr12 - 44116898 44116925 lincRNA RP11-350F4.2 Ensembl G3997.1 AAATTATTTAAATTTAGTCTTTAGAAC 11 3 10 110 0.909090909 1 0 0.166666667 0.545454545 5 1 0 10 chr12:44116898-44116925 minimal NA NA AUUUA UAUU minimal chr12 - 44118719 44118743 repeat DNA-MER113 RepeatMasker G3999.1 AATTTATCTTCCCTTTTATTTATG 13 7 12 168 0.923076923 1.079181246 0 0.2 0.384615385 8 1 0 12 chr12:44118719-44118743 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 44908766 44908791 intron NELL2 Ensembl G4001.1 ATTTTAAACTATAACTTTTCATATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:44908766-44908791 NA NA NA NA UAUU minimal chr12 - 46313286 46313309 NoAnnotation G4005.1 TACATTTCCTCTTATTATTTATC 5 3 4 59 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr12:46313286-46313309 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 46314643 46314664 NoAnnotation G4007.1 TTATCCTCCCTTCCTTGGGGC 4 2 4 28 1 0.602059991 0 0.5 0.75 1 0 0 4 chr12:46314643-46314664 minimal NA NA NA NA NA chr12 - 46591551 46591580 coding SLC38A1 Ensembl G4013.1 CTTATTTTCATTCTTCCTTCATCTCTTTA 4 3 4 58 1 0.602059991 0 0 0 4 0 0 4 chr12:46591551-46591580 minimal NA NA NA UAUU minimal chr12 - 46752530 46752554 3'utr SLC38A2 Ensembl G4018.1 CTAACCTATTTTTCAATATTTATG 112 11 90 1186 0.789473684 1.477121255 0 0.595238095 0.850877193 17 22 2 90 chr12:46752530-46752554 minimal NA NA AUUUA UAUU minimal chr12 - 46752554 46752575 3'utr SLC38A2 Ensembl G4019.1 AACAACATTAATCCATTAAAG 5 3 5 18 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr12:46752554-46752575 NA NA NA NA NA NA chr1 + 104086475 104086497 intron RNPC3 Ensembl G402.1 TACATATATATATTTTTTAATC 4 2 3 44 0.6 0.176091259 0.2 0.25 0.4 3 1 1 3 chr1:104086475-104086497 NA NA NA NA UAUU minimal chr12 - 46754453 46754475 3'utr SLC38A2 Ensembl G4020.1 ACAAAAACACTATTATTTTTTG 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:46754453-46754475 minimal NA NA NA UAUU minimal chr12 - 48056215 48056240 NoAnnotation G4025.1 CCATTATACATATTACTATTCTTAT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr12:48056215-48056240 minimal NA NA NA UAUU minimal chr12 - 48736367 48736392 3'utr ZNF641 Ensembl G4037.1 TTACTATTATATTTTCTCTATATAT 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr12:48736367-48736392 minimal NA NA NA UAUU minimal chr12 - 49082258 49082295 3'utr CCNT1 Ensembl G4042.1 TTTCTCAATCTGTATTTATCCATCCCATCAATAAATG 7 4 7 64 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr12:49082258-49082295 minimal NA NA AUUUA UAUU minimal chr12 - 49083443 49083466 3'utr CCNT1 Ensembl G4043.1 ATTAATATTTACAATTTTTTTTG 5 3 5 65 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:49083443-49083466 minimal NA NA AUUUA UAUU minimal chr12 - 49084731 49084763 3'utr CCNT1 Ensembl G4044.1 TACATTTAGGGCTTCTATTTATTTAGATTTTG 7 3 7 86 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr12:49084731-49084763 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 49086414 49086442 3'utr CCNT1 Ensembl G4046.1 TTTAATATATCAGAAGAGAGGAAGTATT 3 2 3 20 1 0.477121255 0 0 0 3 0 0 3 chr12:49086414-49086442 NA NA NA NA UAUU minimal chr12 - 49330696 49330719 3'utr ARF3 Ensembl G4051.1 CTTCCCTCCATACTTTTTATTTG 10 5 7 106 0.7 0.84509804 0 0.111111111 0.2 8 3 0 7 chr12:49330696-49330719 minimal NA NA NA UAUU minimal chr12 - 49413242 49413267 3'utr MLL2 Ensembl G4052.1 TTTAATTTTTATATAAACTATAACT 8 4 6 91 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr12:49413242-49413267 minimal NA NA NA NA NA chr12 - 49414331 49414363 3'utr MLL2 Ensembl G4054.1 TGGGGGGTATTTATCTATTTATACATGGGATT 7 2 7 73 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr12:49414331-49414363 minimal NA NA AUUUA UAUU minimal chr12 - 49521588 49521610 3'utr TUBA1B Ensembl G4056.1 TAATATTTTTCCATCATATCTC 26 6 26 252 1 1.414973348 0 0.545454545 0.807692308 5 0 0 26 chr12:49521588-49521610 NA NA NA NA UAUU minimal chr12 - 49521725 49521748 coding TUBA1B Ensembl G4057.1 AATACTAATTATCCATTCCTTTT 4 2 2 35 0.5 0.301029996 0 0 0 4 2 0 2 chr12:49521725-49521748 minimal NA NA NA NA NA chr12 - 50383883 50383911 3'utr RACGAP1 Ensembl G4058.1 TTTTATTAAAACTATATATATCTCCCCT 9 4 5 87 0.5 0.397940009 0 0.428571429 0.6 4 4 1 5 chr12:50383883-50383911 minimal NA NA NA UAUU minimal chr12 - 51457477 51457510 3'utr CSRNP2 Ensembl G4062.1 CCTCTTACCCATTCTCTATTTATTCCCTTATTT 9 6 7 109 0.777777778 0.84509804 0 0 0 9 2 0 7 chr12:51457477-51457510 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 54631976 54632003 3'utr CBX5 Ensembl G4070.1 ACATTCACCTCTATTATTTATTTATTT 9 4 7 114 0.7 0.544068044 0 0.111111111 0.2 8 2 1 7 chr12:54631976-54632003 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 54634668 54634696 3'utr CBX5 Ensembl G4071.1 ATTTCTTTCCATTCCTCATATTTAGACT 6 3 6 70 0.857142857 0.477121255 0 0.166666667 0.285714286 5 0 1 6 chr12:54634668-54634696 minimal NA NA AUUUA UAUU minimal chr12 - 56599275 56599303 3'utr RNF41 Ensembl G4077.1 CAATTTAATTTATTTACTTCCTTTTTTT 8 4 6 124 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr12:56599275-56599303 minimal NA NA AUUUA UAUU minimal chr12 - 56636866 56636891 3'utr ANKRD52 Ensembl G4079.1 ATATCTAATTCTATTTATTTAGAAA 13 3 13 138 0.928571429 0.812913357 0 0.428571429 0.714285714 4 0 1 13 chr12:56636866-56636891 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 107601349 107601373 3'utr PRMT6 Ensembl G408.1 TAAATTATTTAAACTCACTTAATT 21 4 18 199 0.857142857 1.255272505 0 0.333333333 0.714285714 6 3 0 18 chr1:107601349-107601373 minimal NA NA AUUUA UAUU minimal chr12 - 56680193 56680239 intron CS Ensembl G4080.1 CTGCTATTATTATTATATTACTATTTAACAAATAATTTACTCAGTG 8 5 7 99 0.875 0.84509804 0 0.166666667 0.375 5 1 0 7 chr12:56680193-56680239 minimal NA NA AUUUA UAUU minimal chr12 - 56989862 56989888 3'utr BAZ2A Ensembl G4082.1 AATTTAAATTTATTTCTTTCTATATT 5 4 5 69 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:56989862-56989888 minimal NA NA AUUUA UAUU minimal chr12 - 56990483 56990505 3'utr BAZ2A Ensembl G4083.1 CATAAATATTTATATTTTATCT 16 5 13 173 0.8125 1.113943352 0 0.4 0.625 6 3 0 13 chr12:56990483-56990505 minimal NA NA AUUUA UAUU minimal chr12 - 57037095 57037118 intron ATP5B Ensembl G4087.1 TTCTATATTTTCTATTTAATTTT 4 2 3 54 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr12:57037095-57037118 minimal NA NA AUUUA UAUU minimal chr12 - 57040378 57040398 NoAnnotation G4094.1 TCTTATTTATCTTATTATTG 3 2 2 35 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:57040378-57040398 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 57392795 57392822 3'utr ZBTB39 Ensembl G4096.1 TCTAACTCCTTCCATTAAATTAATAAG 12 4 11 102 0.916666667 1.041392685 0 0.333333333 0.5 6 1 0 11 chr12:57392795-57392822 NA NA NA NA NA NA chr12 - 57393074 57393103 3'utr ZBTB39 Ensembl G4097.1 CAAATTCTAGATAGACACTGTATTTATTG 3 2 3 29 1 0.477121255 0 0 0 3 0 0 3 chr12:57393074-57393103 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 57395053 57395076 3'utr ZBTB39 Ensembl G4098.1 ACATTAATATTTATTTATTTTTG 10 4 8 132 0.8 0.903089987 0 0.8 0.9 1 2 0 8 chr12:57395053-57395076 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 57451744 57451772 3'utr TMEM194A Ensembl G4099.1 AAATATACTATTTTTTACCTTATTTATA 8 4 5 114 0.625 0.698970004 0 0.4 0.625 3 3 0 5 chr12:57451744-57451772 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 57910392 57910422 3'utr DDIT3 Ensembl G4103.1 TACATTTATTTATTACTGTCCCTATCTATT 16 2 15 208 0.9375 1.176091259 0 0.4 0.625 6 1 0 15 chr12:57910392-57910422 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 58142060 58142087 3'utr CDK4 Ensembl G4104.1 TCCCTTTCCCTACCTTTATATTTGGGG 5 3 5 54 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:58142060-58142087 minimal NA NA NA UAUU minimal chr12 - 59266141 59266164 3'utr LRIG3 Ensembl G4106.1 AATACCTTTTTAAACTATTTTTT 4 2 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr12:59266141-59266164 NA NA NA NA UAUU minimal chr1 + 109238994 109239014 intron PRPF38B Ensembl G411.1 ATTACTCTCATATTTTTATT 5 4 5 55 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:109238994-109239014 minimal NA NA NA UAUU minimal chr12 - 64583416 64583441 NoAnnotation G4110.1 TCTCATTTTTAACTTACTTATTTAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr12:64583416-64583441 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 68688511 68688532 3'utr MDM1 Ensembl G4118.1 TATATATTTTTCTTATTTATG 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:68688511-68688532 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 109242960 109242982 3'utr PRPF38B Ensembl G412.1 TATAAGGCAATAAACTGCCACT 7 3 6 22 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr1:109242960-109242982 NA NA NA NA NA NA chr12 - 71309827 71309848 repeat LINE-L2a RepeatMasker G4121.1 TATATTTTACTTTTTTTATTG 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:71309827-71309848 minimal NA NA NA UAUU minimal chr12 - 74891850 74891874 NoAnnotation G4124.1 CAATATATTTTATTTTATTATTCT 4 3 4 55 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:74891850-74891874 minimal NA NA NA UAUU minimal chr12 - 75879169 75879191 NoAnnotation G4131.1 ATACTTTAATTAAACTATTTCT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:75879169-75879191 NA NA NA NA UAUU minimal chr12 - 75892857 75892879 3'utr KRR1 Ensembl G4132.1 CTATAACATATATTTTTTTCTG 6 4 6 66 1 0.77815125 0 0 0 6 0 0 6 chr12:75892857-75892879 NA NA NA NA UAUU minimal chr12 - 75893425 75893450 3'utr KRR1 Ensembl G4133.1 TTCTTTATAAATTATATTATTATTG 13 8 13 172 1 1.113943352 0 0.3 0.461538462 7 0 0 13 chr12:75893425-75893450 minimal NA NA NA UAUU minimal chr12 - 76738379 76738403 3'utr BBS10 Ensembl G4138.1 CTATAATATCAAAATTTTTTATAT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:76738379-76738403 minimal NA NA NA NA NA chr12 - 76738697 76738728 3'utr BBS10 Ensembl G4139.1 TTTTATTTTTAATTTTTATTTCTAATTTATT 4 3 4 80 1 0.602059991 0 0 0 4 0 0 4 chr12:76738697-76738728 minimal NA NA AUUUA UAUU minimal chr12 - 79984377 79984405 3'utr PAWR Ensembl G4153.1 TATCCAACCTTAAAATATATTAGTATAT 9 2 9 77 1 0.954242509 0 0.5 0.777777778 2 0 0 9 chr12:79984377-79984405 NA NA NA NA UAUU minimal chr12 - 79984716 79984743 3'utr PAWR Ensembl G4154.1 CATTTCTCCCCTTTTAGTTTATTTAAT 5 2 5 60 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr12:79984716-79984743 minimal NA NA AUUUA UAUU minimal chr12 - 79985294 79985319 3'utr PAWR Ensembl G4155.1 ATTTTTTCTTCTATTAAATATTATT 11 4 10 141 0.909090909 1 0 0.285714286 0.545454545 5 1 0 10 chr12:79985294-79985319 minimal NA NA NA UAUU minimal chr12 - 80005124 80005156 intron PAWR Ensembl G4158.1 TAAACCTAATAACTTATTTTTTATATATATAT 4 3 3 44 1 0.602059991 0 0 0 4 0 0 4 chr12:80005124-80005156 minimal NA NA NA UAUU minimal chr1 + 109301074 109301095 repeat Low_complexity-AT_rich RepeatMasker G416.1 TAACATATTTAAATTAATATT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:109301074-109301095 minimal NA NA AUUUA UAUU minimal chr12 - 80168591 80168617 3'utr PPP1R12A Ensembl G4163.1 CTTTACATTTCACATACCTATATTTA 5 2 4 56 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr12:80168591-80168617 minimal NA NA AUUUA UAUU minimal chr12 - 80211483 80211510 intron PPP1R12A Ensembl G4165.1 TATCTTTATTATCTTAACTATTTATTT 3 2 3 43 1 0.477121255 0 0 0 3 0 0 3 chr12:80211483-80211510 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 81005688 81005709 NoAnnotation G4168.1 TCAAATATTTCATTTTAAATG 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:81005688-81005709 NA NA NA NA UAUU minimal chr12 - 85264124 85264147 intron SLC6A15 Ensembl G4173.1 TCTATTATCACTATTTATTATTG 5 2 3 60 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr12:85264124-85264147 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 85275761 85275794 3'utr SLC6A15 Ensembl G4174.1 AATACAATTTATTTAGTACATACATTTATTATT 4 2 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:85275761-85275794 minimal NA NA AUUUA UAUU minimal chr12 - 85562724 85562760 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G4177.1 GTTGTGAGACAGGTTAGTTTTACCCTATTGATGATA 42 2 41 362 0.931818182 1.135662602 0.386363636 0.5 0.795454545 9 1 2 41 chr12:85562724-85562760 NA NA NA NA UAUU minimal chr12 - 86194788 86194812 NoAnnotation G4178.1 TAAAATAACAACACCTCATTAGTG 3 2 3 14 0.75 0.176091259 0 0 0 4 0 1 3 chr12:86194788-86194812 NA NA NA NA NA NA chr12 - 86194864 86194885 NoAnnotation G4179.1 TTTTAAATGGTAGACACAGAA 3 2 3 15 1 0.477121255 0 0 0 3 0 0 3 chr12:86194864-86194885 NA NA NA NA NA NA chr1 + 109638182 109638224 3'utr TMEM167B Ensembl G418.1 ATTACTTATTTTTCTTAGCCAAATTTTAATTTTCTTCATATT 3 2 3 38 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:109638182-109638224 minimal NA NA NA UAUU minimal chr12 - 86195640 86195661 NoAnnotation G4180.1 CTTACGCTATATATATTTATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr12:86195640-86195661 minimal NA NA AUUUA UAUU minimal chr12 - 86196883 86196905 NoAnnotation G4181.1 CTTAAATCTTCTTAACATATTT 4 2 2 38 0.5 0.301029996 0 0 0 4 2 0 2 chr12:86196883-86196905 NA NA NA NA UAUU minimal chr12 - 88498316 88498342 intron CEP290 Ensembl G4186.1 AATTTTAATATATACAATATTTATAT 5 4 5 57 1 0.698970004 0 0 0 5 0 0 5 chr12:88498316-88498342 minimal NA NA AUUUA UAUU minimal chr12 - 89914072 89914101 3'utr GALNT4 Ensembl G4189.1 TACTTATTACATTATTTTTATTTTAGTAT 15 6 15 225 1 1.176091259 0 0.5 0.666666667 5 0 0 15 chr12:89914072-89914101 minimal NA NA NA UAUU minimal chr12 - 93168660 93168685 3'utr EEA1 Ensembl G4198.1 ACATTAAATATTTTACTTTCTATTT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr12:93168660-93168685 NA NA NA NA UAUU minimal chr12 - 93169740 93169765 3'utr EEA1 Ensembl G4199.1 TAATATTACACTAACATTAGATTTT 9 4 8 72 0.8 0.602059991 0 0.428571429 0.6 4 1 1 8 chr12:93169740-93169765 NA NA NA NA UAUU minimal chr12 - 93176156 93176182 intron EEA1 Ensembl G4200.1 CAAATACTTTAAATATTTATTTAGTA 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:93176156-93176182 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 95451907 95451939 intron NR2C1 Ensembl G4206.1 TACTTTTTTATTTATTCAACTAATATTTATTG 10 5 9 166 0.9 0.954242509 0 0 0 10 1 0 9 chr12:95451907-95451939 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr12 - 96672624 96672646 3'utr CDK17 Ensembl G4207.1 TATATTTCATTTTAACTTTATT 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:96672624-96672646 minimal NA NA NA UAUU minimal chr12 - 96672817 96672842 3'utr CDK17 Ensembl G4208.1 CATCTTACAAACTATAAATCTTAAT 5 2 3 34 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr12:96672817-96672842 NA NA NA NA NA NA chr12 - 96673239 96673263 3'utr CDK17 Ensembl G4209.1 TATACTAATACACTTACCTATTTT 9 3 8 73 0.8 0.602059991 0 0.125 0.3 7 1 1 8 chr12:96673239-96673263 NA NA NA NA UAUU minimal chr12 - 100649707 100649727 intron DEPDC4 Ensembl G4218.1 TTATACTATCTCTCTTTTAT 4 3 4 44 1 0.602059991 0 0 0 4 0 0 4 chr12:100649707-100649727 minimal NA NA NA NA NA chr12 - 102468505 102468529 intron NUP37 Ensembl G4230.1 CTTTTATATTTTCTTCTTTATTTA 8 4 8 125 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr12:102468505-102468529 minimal NA NA AUUUA UAUU minimal chr12 - 106457424 106457449 3'utr NUAK1 Ensembl G4238.1 ACTTTTATTTAATTTCTATTTTTTT 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr12:106457424-106457449 minimal NA NA AUUUA UAUU minimal chr1 + 110035298 110035320 repeat Low_complexity-AT_rich RepeatMasker G424.1 CTTTTTATAACTTTATATTATT 9 5 9 112 1 0.954242509 0 0.6 0.777777778 2 0 0 9 chr1:110035298-110035320 minimal NA NA NA UAUU minimal chr12 - 106631673 106631697 3'utr CKAP4 Ensembl G4240.1 TATTTTTAATTCTTAATAAACACT 4 2 2 41 0.5 0.301029996 0 0 0 4 2 0 2 chr12:106631673-106631697 NA NA NA NA UAUU minimal chr12 - 106632619 106632642 3'utr CKAP4 Ensembl G4241.1 TTAACTTATTTACAATATTTAAG 13 5 12 122 0.923076923 1.079181246 0 0.333333333 0.538461538 6 1 0 12 chr12:106632619-106632642 minimal NA NA AUUUA UAUU minimal chr12 - 108127032 108127056 3'utr PRDM4 Ensembl G4243.1 CCAACTCAAAATAACATTATTTAA 3 3 3 18 1 0.477121255 0 0 0 3 0 0 3 chr12:108127032-108127056 minimal NA NA AUUUA UAUU minimal chr12 - 108271197 108271224 NoAnnotation G4245.1 ATATTCTACTTCATTATTACTTAGATT 5 2 5 56 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:108271197-108271224 minimal NA NA NA UAUU minimal chr1 + 110113610 110113637 repeat DNA-Charlie7 RepeatMasker G425.1 TTAAAACTATTATATTAACTATTTATA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr1:110113610-110113637 minimal NA NA AUUUA UAUU minimal chr12 - 110830491 110830512 repeat SINE-MIRc RepeatMasker G4254.1 CTTTACTACTTTTTTATTTAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:110830491-110830512 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 110972447 110972469 3'utr PPTC7 Ensembl G4260.1 ACATAAAATATTTTCTCTATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:110972447-110972469 NA NA NA NA UAUU minimal chr12 - 110972597 110972618 3'utr PPTC7 Ensembl G4261.1 TTTTATACAACTTATTTACTC 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr12:110972597-110972618 minimal NA NA AUUUA UAUU minimal chr12 - 110972837 110972865 3'utr PPTC7 Ensembl G4262.1 TTGCATCCAGAAGGGTTTTGTTAGAATG 14 3 14 100 1 1.146128036 0 0.833333333 0.928571429 1 0 0 14 chr12:110972837-110972865 NA NA NA NA NA NA chr12 - 111158023 111158065 3'utr PPP1CC Ensembl G4265.1 TAATAACATTTTATACAATTTCCATATAGTCTATTCATTAAG 7 6 7 69 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr12:111158023-111158065 minimal NA NA NA UAUU minimal chr12 - 111158817 111158838 3'utr PPP1CC Ensembl G4267.1 TATATAACCTTCATTTTTAAG 8 3 7 73 0.875 0.84509804 0 0.2 0.5 4 1 0 7 chr12:111158817-111158838 NA NA NA NA NA NA chr12 - 112080419 112080459 NoAnnotation G4271.1 ATTCTATTTTATTTAAAATCTATTTTTACACTAGTTAGAA 10 7 9 126 0.9 0.954242509 0 0.25 0.4 6 1 0 9 chr12:112080419-112080459 minimal NA NA AUUUA UAUU minimal chr12 - 112081693 112081716 3'utr BRAP Ensembl G4272.1 CATTTTTCCATTGTATTTATGGA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr12:112081693-112081716 minimal NA NA AUUUA UAUU minimal chr12 - 112458530 112458555 repeat SINE-MIRb RepeatMasker G4275.1 TTAACTATTATTATTATTCTAATAA 4 2 4 46 1 0.602059991 0 1 1 0 0 0 4 chr12:112458530-112458555 minimal NA NA NA UAUU minimal chr12 - 112464659 112464684 3'utr NAA25 Ensembl G4277.1 TCTTTCATTTTAACTTTTAATATAA 3 3 3 37 1 0.477121255 0 0 0 3 0 0 3 chr12:112464659-112464684 NA NA NA NA NA NA chr12 - 112598232 112598254 3'utr C12orf51 Ensembl G4281.1 ATATTTATTATAATTATTTATG 3 3 3 36 0.75 0.176091259 0 0 0 4 0 1 3 chr12:112598232-112598254 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 115108661 115108682 3'utr TBX3 Ensembl G4286.1 AAAATTAAACTTTAATTTATT 7 4 5 64 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr12:115108661-115108682 minimal NA NA AUUUA UAUU minimal chr12 - 116396903 116396925 3'utr MED13L Ensembl G4290.1 TATAATATTTCCCTTAAATATG 5 3 5 43 1 0.698970004 0 0.25 0.4 3 0 0 5 chr12:116396903-116396925 NA NA NA NA UAUU minimal chr12 - 116419602 116419628 intron MED13L Ensembl G4293.1 ATCATACTTTTAATATAACTTATTTT 3 3 3 31 0.75 0.176091259 0 0 0 4 0 1 3 chr12:116419602-116419628 minimal NA NA NA UAUU minimal chr1 + 16195532 16195556 repeat Low_complexity-AT_rich RepeatMasker G43.1 CTTTTATTAAATTAATTATTTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:16195532-16195556 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 110473543 110473563 3'utr CSF1 Ensembl G430.1 TCATTTAAATATCTATTTAA 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:110473543-110473563 minimal NA NA AUUUA UAUU minimal chr12 - 117583152 117583205 3'utr FBXO21 Ensembl G4300.1 CACATCTCTATAAATCATTAGTTTTCTATTTTATTACATAAAATTCTTTTAGA 4 3 4 41 1 0.602059991 0 0 0 4 0 0 4 chr12:117583152-117583205 minimal NA NA NA UAUU minimal chr12 - 117583300 117583321 3'utr FBXO21 Ensembl G4301.1 AATTTATTTTTTTCTAATATG 7 3 7 84 1 0.84509804 0 0.333333333 0.714285714 2 0 0 7 chr12:117583300-117583321 minimal NA NA AUUUA UAUU minimal chr12 - 120882173 120882194 3'utr TRIAP1 Ensembl G4314.1 CACACTTTTATTTTTATATAG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr12:120882173-120882194 minimal NA NA NA UAUU minimal chr12 - 121201693 121201720 3'utr AC069214.1 Ensembl G4316.1 TAAATACATTTTTCTATTTTCTATTTT 9 5 9 117 1 0.954242509 0 0.285714286 0.444444444 5 0 0 9 chr12:121201693-121201720 NA NA NA NA UAUU minimal chr1 + 110885941 110885962 intron RBM15 Ensembl G432.1 TCTTTTTATTTTCATATTTAA 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr1:110885941-110885962 minimal NA NA AUUUA UAUU minimal chr12 - 123009594 123009615 intron RSRC2 Ensembl G4323.1 AATTTAAACATTTATTTATGC 6 3 5 55 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr12:123009594-123009615 UUAUUUAU NA NA AUUUA UAUU minimal chr12 - 123641023 123641044 3'utr MPHOSPH9 Ensembl G4326.1 TTATCCTTTTACAATTAACTG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:123641023-123641044 minimal NA NA NA NA NA chr12 - 123776273 123776293 3'utr SBNO1 Ensembl G4328.1 CTCTATTTATTCTTTTCTTG 4 2 4 48 1 0.602059991 0 0.5 0.75 1 0 0 4 chr12:123776273-123776293 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 123777240 123777263 3'utr SBNO1 Ensembl G4329.1 TATCTATATATATTTATTCTAAC 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr12:123777240-123777263 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 127650501 127650546 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G4337.1 TAGACGACTTGCTTCTGGGTCGGGGTTTCGTACGTAGCAGAGCAG 652 9 32 4981 0.040050063 -0.665111737 0.155193992 0.35326087 0.85106383 119 620 147 32 chr12:127650501-127650546 NA NA NA NA NA NA chr12 - 127650613 127650659 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G4338.1 GTCCGGTGCGGAGTGCCCTTTGTCCTGGGAAACGGGGCGCGGCCGG 1933 3 268 4310 0.120503597 -0.037248057 0.01573741 0.535714286 0.95323741 104 1665 291 268 chr12:127650613-127650659 NA NA NA NA NA NA chr12 - 127650896 127650929 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G4339.1 TTAAGTCAGAATCCCGCCCAGGCGGAACGATAC 440 2 10 889 0.018552876 -1 0.022263451 0.328244275 0.836734694 88 430 99 10 chr12:127650896-127650929 NA NA NA NA NA NA chr1 + 110887192 110887212 intron RBM15 Ensembl G434.1 TATTATAAAAAACTAATTAT 4 2 4 28 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr1:110887192-110887212 minimal NA NA NA UAUU minimal chr12 - 133457987 133458010 intron CHFR Ensembl G4348.1 CATTATTTACTTTCTATTTATTG 6 2 4 80 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr12:133457987-133458010 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr12 - 133504797 133504819 intron ZNF605 Ensembl G4349.1 CATTATATCCCTTACTTTTTCT 4 2 3 44 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr12:133504797-133504819 minimal NA NA NA NA NA chr1 + 110887409 110887434 intron RBM15 Ensembl G435.1 TAACAACCAATTTTTTTCTATCTTT 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr1:110887409-110887434 NA NA NA NA NA NA chr12 - 133507105 133507129 intron ZNF605 Ensembl G4351.1 ATAATATTTATCCTACCTATATTG 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr12:133507105-133507129 minimal NA NA AUUUA UAUU minimal chr1 + 110888862 110888885 repeat Low_complexity-AT_rich RepeatMasker G436.1 AAATATATATATTTTTAATATTG 3 2 2 28 0.666666667 0.301029996 0.666666667 0 0 3 1 0 2 chr1:110888862-110888885 NA NA NA NA UAUU minimal chr13 + 21721471 21721498 NoAnnotation G4362.1 ACCATATTAAATTCTATTTACTATTTG 34 10 30 332 0.857142857 1.176091259 0.085714286 0.304347826 0.542857143 16 4 1 30 chr13:21721471-21721498 minimal NA NA AUUUA UAUU minimal chr13 + 21721524 21721547 NoAnnotation G4363.1 TAAAATAAACATACTCTTCTTCC 4 3 4 27 1 0.602059991 0 0 0 4 0 0 4 chr13:21721524-21721547 NA NA NA NA NA NA chr13 + 21722361 21722384 repeat SINE-MIR RepeatMasker G4364.1 ATAAATTATTTCAATCTTTATTT 6 2 3 74 0.5 0.477121255 0 0.5 0.666666667 2 3 0 3 chr13:21722361-21722384 minimal NA NA NA UAUU minimal chr13 + 22276189 22276222 repeat Low_complexity-AT_rich RepeatMasker G4368.1 CAACATTTTATTTATTTTATATATTTATTTATT 34 10 29 503 0.805555556 0.985276743 0 0.25 0.416666667 21 5 2 29 chr13:22276189-22276222 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 + 25907278 25907298 3'utr NUPL1 Ensembl G4373.1 TTTAACTTTCTTATCTATAG 3 3 3 30 1 0.477121255 1 0 0 3 0 0 3 chr13:25907278-25907298 minimal NA NA NA NA NA chr13 + 25908825 25908848 3'utr NUPL1 Ensembl G4374.1 AAAATTATAAAATATTTTTAGCA 4 2 4 32 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr13:25908825-25908848 minimal NA NA NA UAUU minimal chr13 + 25909016 25909048 3'utr NUPL1 Ensembl G4375.1 TATATATCACTACAAACTTAATTTTATTTATG 19 5 15 193 0.681818182 0.574031268 0.227272727 0.157894737 0.272727273 16 4 3 15 chr13:25909016-25909048 UUAUUUAU NA NA AUUUA UAUU minimal chr13 + 25909845 25909882 3'utr NUPL1 Ensembl G4376.1 TTTTTCTTTAAATGCTTTATAATTTTACACTACCTTT 5 3 4 66 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:25909845-25909882 minimal NA NA NA NA NA chr13 + 27262078 27262100 3'utr WASF3 Ensembl G4382.1 ATTTATTCTATTTATATCTTAT 5 4 5 64 1 0.698970004 0 0 0 5 0 0 5 chr13:27262078-27262100 minimal NA NA AUUUA UAUU minimal chr13 + 27829201 27829230 snoRNA SNORD102 Ensembl G4383.1 GCTTAATGATGACTGTTTTTTTTGATTGC 11 2 2 163 0.153846154 -0.176091259 0.230769231 0.181818182 0.307692308 9 9 2 2 chr13:27829201-27829230 NA NA NA NA NA NA chr13 + 28007228 28007254 intron GTF3A Ensembl G4385.1 TCATTTTTAACCTCTTCTATTAATAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:28007228-28007254 NA NA NA NA UAUU minimal chr13 + 28197553 28197575 repeat LTR-MLT1K RepeatMasker G4387.1 TATTCTTCTAATAAATTCCCTC 7 2 7 61 1 0.84509804 0 0.25 0.571428571 3 0 0 7 chr13:28197553-28197575 NA NA NA NA UAUU minimal chr13 + 28205765 28205794 repeat LINE-L2a RepeatMasker G4388.1 ACATTATATTATATATTTATCTATTTATT 3 2 3 40 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr13:28205765-28205794 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 31205616 31205644 intron USPL1 Ensembl G4396.1 TACTAATATTTTATTTTTATTTACTTAT 3 2 3 51 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:31205616-31205644 minimal NA NA AUUUA UAUU minimal chr13 + 31233504 31233536 repeat Low_complexity-AT_rich RepeatMasker G4397.1 TTAACTTTTTTCATATAATATTTATTATTATT 75 13 62 1025 0.805194805 1.315270435 0 0.214285714 0.428571429 44 13 2 62 chr13:31233504-31233536 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 110915539 110915568 NoAnnotation G440.1 TATTTTATATCTCATATTTTACATTACAT 9 5 9 114 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr1:110915539-110915568 minimal NA NA NA UAUU minimal chr13 + 34479827 34479848 repeat SINE-MIR RepeatMasker G4409.1 CACTCTAAATATTATTTATTG 4 2 3 37 0.75 0.477121255 0.75 0 0 4 1 0 3 chr13:34479827-34479848 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 111727041 111727064 3'utr CEPT1 Ensembl G442.1 TATAACTTTTATTCTTTATTATT 6 4 5 84 0.833333333 0.698970004 0.166666667 0 0 6 1 0 5 chr1:111727041-111727064 minimal NA NA NA UAUU minimal chr13 + 35767255 35767280 intron NBEA Ensembl G4421.1 CTATAACTATTTAAACTATTTAATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr13:35767255-35767280 minimal NA NA AUUUA UAUU minimal chr13 + 37583059 37583084 intron EXOSC8 Ensembl G4423.1 ATATTTTATTTACCTAATTTTAGTA 9 2 7 118 0.777777778 0.84509804 0.111111111 0.5 0.777777778 2 2 0 7 chr13:37583059-37583084 minimal NA NA AUUUA UAUU minimal chr13 + 38934753 38934780 intron UFM1 Ensembl G4431.1 TTTACTAAATCATTTATTATATTTAAT 6 2 6 66 1 0.77815125 0.166666667 0 0 6 0 0 6 chr13:38934753-38934780 minimal NA NA AUUUA UAUU minimal chr13 + 39457352 39457372 3'utr FREM2 Ensembl G4439.1 CATTATTTTTCTTAATATCT 6 2 3 69 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr13:39457352-39457372 minimal NA NA NA UAUU minimal chr13 + 41949968 41949990 3'utr NAA16 Ensembl G4447.1 TATAATTATAATTTCTTACTAA 4 2 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:41949968-41949990 minimal NA NA NA NA NA chr13 + 42809359 42809382 NoAnnotation G4451.1 ATACTCTATTTACATTATTTATA 10 3 4 114 0.5 0.698970004 0 0.428571429 0.6 4 5 0 5 chr13:42809359-42809382 UUAUUUAU NA NA AUUUA UAUU minimal chr13 + 42810045 42810075 repeat Low_complexity-AT_rich RepeatMasker G4452.1 TTATTTTCATATTAAAATTTTTCTTATCTT 5 4 5 81 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:42810045-42810075 minimal NA NA NA UAUU minimal chr13 + 42816493 42816513 NoAnnotation G4454.1 ATAATATCTATCTATTTATT 4 2 2 41 0.5 0.301029996 0 0 0 4 2 0 2 chr13:42816493-42816513 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 42850358 42850380 repeat Low_complexity-AT_rich RepeatMasker G4455.1 TCTTTTTTTGGGTATTATTATT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:42850358-42850380 minimal NA NA NA UAUU minimal chr13 + 44467261 44467282 3'utr LACC1 Ensembl G4461.1 CATCTTAAAAATATTCTTATT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:44467261-44467282 minimal NA NA NA UAUU minimal chr13 + 46092575 46092598 intron COG3 Ensembl G4467.1 TATTTTTTAAAAACCTATTTAAT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:46092575-46092598 minimal NA NA AUUUA UAUU minimal chr13 + 47288464 47288492 repeat Low_complexity-AT_rich RepeatMasker G4469.1 AAATTTATTTCATTTTATTTAATAATTT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr13:47288464-47288492 minimal NA NA AUUUA UAUU minimal chr13 + 47325250 47325276 repeat Low_complexity-AT_rich RepeatMasker G4471.1 ACATACAAAATATTTATATAAATATT 3 2 2 27 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:47325250-47325276 minimal NA NA AUUUA UAUU minimal chr13 + 47325354 47325376 3'utr LRCH1 Ensembl G4472.1 TTAAACACTTTATTTTAATATA 3 2 3 29 1 0.477121255 0 0 0 3 0 0 3 chr13:47325354-47325376 minimal NA NA NA UAUU minimal chr13 + 48620703 48620723 repeat DNA-Charlie1b RepeatMasker G4475.1 ACATCATTTCACTATTTATA 5 2 5 40 1 0.698970004 0.4 1 1 0 0 0 5 chr13:48620703-48620723 minimal NA NA AUUUA UAUU minimal chr13 + 48835834 48835858 3'utr ITM2B Ensembl G4477.1 TCAAATATATTTAACTATTTAGAG 8 2 8 71 0.888888889 0.602059991 0.777777778 0.4 0.666666667 3 0 1 8 chr13:48835834-48835858 minimal NA NA AUUUA UAUU minimal chr1 + 113010907 113010932 intron WNT2B Ensembl G448.1 ATATACTATTTATTTTCCTTTAGCT 3 2 3 38 1 0.477121255 0.666666667 0 0 3 0 0 3 chr1:113010907-113010932 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 49783194 49783220 3'utr FNDC3A Ensembl G4484.1 TTTACATTTTATTTAAATTTAATCTC 6 4 5 77 0.833333333 0.698970004 0 0 0 6 1 0 5 chr13:49783194-49783220 minimal NA NA AUUUA UAUU minimal chr13 + 50679266 50679287 3'utr DLEU1 Ensembl G4488.1 TATTTCATCTCTTTCTACTCT 4 3 4 42 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:50679266-50679287 NA NA NA NA UAUU minimal chr13 + 50679891 50679914 NoAnnotation G4489.1 CACTTCATTAACCTACCCTTATT 3 3 3 24 0.75 0.176091259 0.75 0 0 4 0 1 3 chr13:50679891-50679914 minimal NA NA NA UAUU minimal chr13 + 52598565 52598587 coding ALG11 Ensembl G4499.1 CTCATCTACTACTATTTATTTG 11 6 10 109 0.909090909 1 0.545454545 0.375 0.545454545 5 1 0 10 chr13:52598565-52598587 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 52606421 52606445 3'utr UTP14C Ensembl G4502.1 TCTTCTATAATCCTATATTTATTA 11 4 9 127 0.75 0.653212514 0.166666667 0.2 0.333333333 8 2 1 9 chr13:52606421-52606445 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 52607180 52607203 3'utr UTP14C Ensembl G4503.1 CTTATTTCTTCAAAATTATTTTC 10 4 6 114 0.7 0.84509804 0 0.285714286 0.5 5 3 0 7 chr13:52607180-52607203 minimal NA NA NA UAUU minimal chr13 + 53036839 53036860 intron CKAP2 Ensembl G4505.1 TTATTTTAACAATTATTTAAT 3 2 2 32 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr13:53036839-53036860 minimal NA NA AUUUA UAUU minimal chr13 + 53050389 53050409 3'utr CKAP2 Ensembl G4507.1 TATATCTTTTCTATTTATTG 72 3 49 887 0.680555556 1.69019608 1 1 1 0 23 0 49 chr13:53050389-53050409 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 + 53050453 53050476 3'utr CKAP2 Ensembl G4508.1 ATATATATACAATTAAAATATCT 6 3 6 46 1 0.77815125 0.333333333 0.2 0.333333333 4 0 0 6 chr13:53050453-53050476 NA NA NA NA NA NA chr1 + 113213465 113213485 3'utr CAPZA1 Ensembl G452.1 TTATAAACATCTGCATTTTT 3 2 2 23 0.666666667 0.301029996 0.666666667 0 0 3 1 0 2 chr1:113213465-113213485 minimal NA NA NA NA NA chr1 + 113669830 113669855 NoAnnotation G453.1 CAAACATTCTTTTTTCTTTATTATT 3 2 2 43 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:113669830-113669855 minimal NA NA NA UAUU minimal chr13 + 79999670 79999691 NoAnnotation G4538.1 CTCTTTTTACTAATATATATT 4 2 4 42 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr13:79999670-79999691 NA NA NA NA UAUU minimal chr13 + 80128061 80128082 3'utr NDFIP2 Ensembl G4540.1 ATTTCTTATTTATTATTAGAC 5 2 5 55 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:80128061-80128082 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 114451666 114451686 repeat LINE-L2a RepeatMasker G456.1 CAATATATTCTATAATTTAT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:114451666-114451686 minimal NA NA AUUUA UAUU minimal chr13 + 95280671 95280699 repeat Low_complexity-AT_rich RepeatMasker G4560.1 CTTATTTTAAAAATATTTTTTATCTATT 5 3 5 74 0.833333333 0.397940009 0 0 0 6 0 1 5 chr13:95280671-95280699 minimal NA NA NA UAUU minimal chr13 + 98045277 98045302 3'utr MBNL2 Ensembl G4564.1 AATTACTATCTATTTATCTTATATC 6 3 6 68 1 0.77815125 0.166666667 0 0 6 0 0 6 chr13:98045277-98045302 minimal NA NA AUUUA UAUU minimal chr13 + 98118357 98118385 3'utr RAP2A Ensembl G4565.1 TATCAAAAACTTTTTTCTTTTAAATTAT 10 4 9 112 0.818181818 0.653212514 0 0 0 11 1 1 9 chr13:98118357-98118385 minimal NA NA NA NA NA chr13 + 98652995 98653019 intron IPO5 Ensembl G4569.1 TCTTTTTATCATCCATATTTAACC 8 4 6 79 0.875 0.84509804 0 0.333333333 0.5 4 1 0 7 chr13:98652995-98653019 minimal NA NA AUUUA UAUU minimal chr13 + 100037787 100037812 3'utr UBAC2 Ensembl G4572.1 TATTTTCTATCTATATTTTTTATTG 5 3 4 79 0.8 0.602059991 0.6 0 0 5 1 0 4 chr13:100037787-100037812 minimal NA NA NA UAUU minimal chr13 + 100638774 100638826 3'utr ZIC2 Ensembl G4575.1 TAATAACACCCTTCCTTCTGTAAATACCCGTTACCATATTTATCCATTTGTA 54 10 48 463 0.925925926 1.698970004 0.703703704 0.470588235 0.833333333 9 4 0 50 chr13:100638774-100638826 minimal NA NA AUUUA UAUU minimal chr1 + 114517361 114517396 3'utr HIPK1 Ensembl G459.1 AATGGTGGTGTTTTAATATTTTACATAATTAAATA 4 3 4 45 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:114517361-114517396 NA NA NA NA UAUU minimal chr13 + 111374734 111374754 NoAnnotation G4591.1 CTAATTTTTCACTTCTATAT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr13:111374734-111374754 NA NA NA NA NA NA chr13 + 113538289 113538313 3'utr ATP11A Ensembl G4594.1 TTTATATCTCTTTTATTCATTTAT 3 3 3 43 0.75 0.176091259 0 0 0 4 0 1 3 chr13:113538289-113538313 minimal NA NA AUUUA UAUU minimal chr13 + 115091978 115091999 3'utr ZNF828 Ensembl G4600.1 ATTAAACTTCTCATTTCTTTT 9 4 8 97 0.888888889 0.903089987 0 0.285714286 0.444444444 5 1 0 8 chr13:115091978-115091999 NA NA NA NA NA NA chr13 - 20712969 20712992 3'utr GJA3 Ensembl G4604.1 ATTATTAACACTTTCTTTATTTT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:20712969-20712992 minimal NA NA NA UAUU minimal chr13 - 21354733 21354753 3'utr XPO4 Ensembl G4608.1 TCTAATTATATTACATTACT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr13:21354733-21354753 minimal NA NA NA UAUU minimal chr13 - 21365251 21365284 intron XPO4 Ensembl G4610.1 TCTTAGTATTCTCATTAATTTATATATATATAT 9 4 9 113 0.818181818 0.477121255 0 0.428571429 0.636363636 4 0 2 9 chr13:21365251-21365284 minimal NA NA AUUUA UAUU minimal chr13 - 21407340 21407366 repeat LINE-L2b RepeatMasker G4611.1 CAAATATTTATTATTATATATTTATT 6 5 5 72 0.833333333 0.698970004 0 0 0 6 1 0 5 chr13:21407340-21407366 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 21428674 21428700 intron XPO4 Ensembl G4613.1 CTTATTACCTTTACAATTTATTTAAT 4 2 4 46 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:21428674-21428700 minimal NA NA AUUUA UAUU minimal chr13 - 21726191 21726212 repeat LINE-L2a RepeatMasker G4617.1 TATACATTTATTTAATATTTG 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:21726191-21726212 minimal NA NA AUUUA UAUU minimal chr1 + 115418860 115418883 repeat LINE-L4 RepeatMasker G462.1 ACTATTTTCTATTTTATTTATTT 5 2 2 78 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr1:115418860-115418883 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 23903211 23903232 3'utr SACS Ensembl G4620.1 CTTCTTTACTTTAACATATTT 5 4 5 54 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:23903211-23903232 NA NA NA NA UAUU minimal chr13 - 26618747 26618774 3'utr SHISA2 Ensembl G4625.1 AAAATCATTTTACTTATTAATAAATAT 4 2 4 41 1 0.602059991 0 0.5 0.75 1 0 0 4 chr13:26618747-26618774 minimal NA NA NA UAUU minimal chr13 - 26787538 26787560 3'utr RNF6 Ensembl G4626.1 CTTTTCATTAACTTTTTATTTT 13 5 11 175 0.846153846 1.041392685 0 0.333333333 0.538461538 6 2 0 11 chr13:26787538-26787560 minimal NA NA NA UAUU minimal chr13 - 30778024 30778047 3'utr KATNAL1 Ensembl G4639.1 CTTTTCATACTTAAATTTTTTTG 3 2 2 39 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:30778024-30778047 NA NA NA NA NA NA chr13 - 31711356 31711379 3'utr HSPH1 Ensembl G4644.1 AAACTATTTATATTTTCTTTTTT 10 3 7 131 0.7 0.84509804 0 0.428571429 0.6 4 3 0 7 chr13:31711356-31711379 minimal NA NA AUUUA UAUU minimal chr13 - 33084478 33084507 intron N4BP2L2 Ensembl G4646.1 CTTTAAATTAATTTTAATATTTTATTATT 7 3 7 98 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr13:33084478-33084507 minimal NA NA NA UAUU minimal chr13 - 33091630 33091654 3'utr N4BP2L2 Ensembl G4649.1 AATTTTAAACTAATTTATCTATTT 7 3 6 70 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr13:33091630-33091654 minimal NA NA AUUUA UAUU minimal chr13 - 36854227 36854255 intron CCDC169 Ensembl G4656.1 CATATCATTCTTTTACTCATTATTTAAT 4 2 4 53 1 0.602059991 0 0.5 0.75 1 0 0 4 chr13:36854227-36854255 minimal NA NA AUUUA UAUU minimal chr1 + 117917545 117917569 repeat Low_complexity-AT_rich RepeatMasker G466.1 ACTAAAATTTATTTACATAATATT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:117917545-117917569 minimal NA NA AUUUA UAUU minimal chr13 - 37603079 37603107 intron FAM48A Ensembl G4661.1 TTTTATCCTTTTAATATTATTTAATATT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr13:37603079-37603107 minimal NA NA AUUUA UAUU minimal chr13 - 39584583 39584612 3'utr PROSER1 Ensembl G4665.1 TTAGTAATTATGCAGTATGTACTCTATTT 6 2 3 64 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr13:39584583-39584612 minimal NA NA NA UAUU minimal chr13 - 39591822 39591844 intron PROSER1 Ensembl G4667.1 TTACTACTATTTTTATTTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr13:39591822-39591844 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 117964170 117964193 intron MAN1A2 Ensembl G467.1 ACTTTATATACTTTTATCTATAT 6 4 6 70 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr1:117964170-117964193 minimal NA NA NA NA NA chr13 - 41506230 41506254 3'utr ELF1 Ensembl G4679.1 TATTTAAACAAAAATTTAAATTTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr13:41506230-41506254 minimal NA NA AUUUA UAUU minimal chr13 - 41512970 41513000 intron ELF1 Ensembl G4681.1 TTTCTCTATTTATTTATACCTTTTTTTCTC 3 3 3 57 1 0.477121255 0 0 0 3 0 0 3 chr13:41512970-41513000 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 41702686 41702711 3'utr KBTBD6 Ensembl G4683.1 TTTTCTCTAAAATATTTCTCTAATA 5 4 5 52 1 0.698970004 0 0 0 5 0 0 5 chr13:41702686-41702711 NA NA NA NA UAUU minimal chr13 - 41791227 41791258 coding MTRF1 Ensembl G4685.1 CAAAATAAATACTAACTTATTATTATTTATG 8 6 6 71 0.666666667 0.477121255 0 0.125 0.222222222 7 2 1 6 chr13:41791227-41791258 UUAUUUAU NA NA AUUUA UAUU minimal chr13 - 45007995 45008015 3'utr TSC22D1 Ensembl G4692.1 AGGTGTGGACTTTTATATAT 2 2 2 12 1 0.301029996 0 0 0 2 0 0 2 chr13:45007995-45008015 minimal NA NA NA NA NA chr13 - 46530595 46530619 3'utr ZC3H13 Ensembl G4698.1 TACTATTTTTATTTTTAATAAATG 13 4 11 165 0.846153846 1.041392685 0 0.5 0.692307692 4 2 0 11 chr13:46530595-46530619 minimal NA NA NA UAUU minimal chr13 - 46596602 46596625 intron ZC3H13 Ensembl G4702.1 TAATACCATACCCTATTTATTTG 3 3 3 25 1 0.477121255 0 0 0 3 0 0 3 chr13:46596602-46596625 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 47351136 47351160 intron ESD Ensembl G4706.1 ACTTTCATATTAATCTATTCATTG 5 4 5 47 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:47351136-47351160 NA NA NA NA UAUU minimal chr13 - 47351228 47351254 intron ESD Ensembl G4707.1 ACAAACTTCTACCTAAATTACTCCTT 3 3 3 20 1 0.477121255 0 0 0 3 0 0 3 chr13:47351228-47351254 NA NA NA NA NA NA chr13 - 47351501 47351527 intron ESD Ensembl G4708.1 ATATTTTCTTAACTTTATTTTAGAAT 12 2 11 160 0.916666667 1.041392685 0 0.6 0.833333333 2 1 0 11 chr13:47351501-47351527 minimal NA NA NA UAUU minimal chr13 - 50321824 50321853 intron KPNA3 Ensembl G4712.1 ATTATAAATTTCTTCTTATTTATTTATTT 4 3 4 62 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:50321824-50321853 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 50488967 50488991 3'utr SPRYD7 Ensembl G4713.1 TTTATTTAATTCTTATTTAAATAA 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:50488967-50488991 minimal NA NA AUUUA UAUU minimal chr13 - 50489396 50489426 intron SPRYD7 Ensembl G4714.1 ATATATTTATTCTTCTTACCTATTAATATT 3 2 3 44 1 0.477121255 0 0 0 3 0 0 3 chr13:50489396-50489426 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 50567693 50567714 NoAnnotation G4716.1 TTATATACTAATATTAAATAT 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr13:50567693-50567714 minimal NA NA NA UAUU minimal chr13 - 50600137 50600160 NoAnnotation G4718.1 TAAATAAACTATATCATTAGTAT 6 2 6 44 1 0.77815125 0 0.25 0.5 3 0 0 6 chr13:50600137-50600160 NA NA NA NA NA NA chr13 - 50604498 50604529 lincRNA DLEU2 Ensembl G4721.1 TTCATATAATCCTTATTTAATTCATAATCCT 5 2 3 61 0.6 0.477121255 0 0 0 5 2 0 3 chr13:50604498-50604529 minimal NA NA AUUUA UAUU minimal chr13 - 50618953 50618994 lincRNA DLEU2 Ensembl G4722.1 CTTTCATAAACTATTCTTTCTCTAAATTAATATATTTATAT 6 5 6 62 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr13:50618953-50618994 minimal NA NA AUUUA UAUU minimal chr13 - 50647686 50647709 lincRNA DLEU2 Ensembl G4725.1 ATCTCATTTTTTCAATATTTATG 5 4 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chr13:50647686-50647709 minimal NA NA AUUUA UAUU minimal chr13 - 52006353 52006377 intron INTS6 Ensembl G4730.1 ACATTTTATTTACCTTATTTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr13:52006353-52006377 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 60563407 60563435 intron DIAPH3 Ensembl G4746.1 CATTTATTTTTTAAAATTTTATTTATTT 3 3 3 51 1 0.477121255 0 0 0 3 0 0 3 chr13:60563407-60563435 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 60563559 60563581 intron DIAPH3 Ensembl G4747.1 TTTCCAAACTCTCCTATTTATT 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr13:60563559-60563581 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 64542554 64542577 NoAnnotation G4758.1 CTCATATTATTTCATTATTTATT 4 2 4 52 1 0.602059991 0 0.5 0.75 1 0 0 4 chr13:64542554-64542577 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 67798786 67798809 intron PCDH9 Ensembl G4765.1 TAAATATTCTCTCATCTTAGTAA 4 2 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:67798786-67798809 NA NA NA NA UAUU minimal chr1 + 145498848 145498882 3'utr LIX1L Ensembl G477.1 ATTTTTTGTACATACTTTCTCATTTTTATACTTT 12 3 5 155 0.416666667 0.698970004 0 0.375 0.583333333 5 7 0 5 chr1:145498848-145498882 minimal NA NA NA NA NA chr13 - 72002737 72002760 NoAnnotation G4772.1 CATACTTCTATATCTATTTATTG 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr13:72002737-72002760 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 72434938 72434959 intron DACH1 Ensembl G4773.1 CTTTAACTATCAATTAGTATT 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:72434938-72434959 NA NA NA NA UAUU minimal chr1 + 145500947 145500979 3'utr LIX1L Ensembl G478.1 ATCTCTTATTTATACTATATTATTGTCCCATG 19 10 18 229 0.9 0.954242509 0.1 0.2 0.4 12 1 1 18 chr1:145500947-145500979 UUAUUUAU NA NA AUUUA UAUU minimal chr13 - 75883586 75883608 intron TBC1D4 Ensembl G4786.1 TATTCAATTTAACTATTTAATT 4 3 4 41 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:75883586-75883608 minimal NA NA AUUUA UAUU minimal chr13 - 77580065 77580089 3'utr FBXL3 Ensembl G4788.1 AACATTTTATATTACTTTCATATG 4 2 2 42 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr13:77580065-77580089 minimal NA NA NA UAUU minimal chr13 - 77580564 77580586 3'utr FBXL3 Ensembl G4791.1 CTAAACCATATACATTCTTTTG 11 4 9 86 0.818181818 0.954242509 0 0.25 0.454545455 6 2 0 9 chr13:77580564-77580586 NA NA NA NA NA NA chr13 - 77618496 77618521 NoAnnotation G4792.1 CATTTTTAACTTTATTTATTTATTT 3 3 3 44 1 0.477121255 0 0 0 3 0 0 3 chr13:77618496-77618521 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 79188490 79188510 3'utr RNF219 Ensembl G4798.1 AACATTTTACATTAATATTG 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:79188490-79188510 NA NA NA NA UAUU minimal chr1 + 16266814 16266836 3'utr SPEN Ensembl G48.1 CTAACCCCTCTTCCTATTACCT 11 4 7 79 0.909090909 1 0.272727273 0.5 0.727272727 3 1 0 10 chr1:16266814-16266836 NA NA NA NA UAUU minimal chr1 + 145509297 145509322 3'utr RBM8A Ensembl G480.1 TGTTTATATTTAATCTCTTACCGTA 34 5 33 334 0.970588235 1.51851394 0.882352941 0.666666667 0.911764706 3 1 0 33 chr1:145509297-145509322 minimal NA NA AUUUA UAUU minimal chr13 - 79886043 79886065 NoAnnotation G4802.1 TCAACATTTTTATTATTTATAG 5 3 4 55 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr13:79886043-79886065 UUAUUUAU NA NA AUUUA UAUU minimal chr13 - 79887204 79887230 NoAnnotation G4803.1 CCTTTTATATATCTATATTTTTCAAT 8 5 8 98 1 0.903089987 0 0.4 0.625 3 0 0 8 chr13:79887204-79887230 minimal NA NA NA UAUU minimal chr13 - 79889023 79889051 NoAnnotation G4805.1 TACAATAATATCATCCTATTATTTTATG 3 3 3 29 0.6 0 0 0.25 0.4 3 0 2 3 chr13:79889023-79889051 minimal NA NA NA UAUU minimal chr13 - 79894214 79894238 3'utr RBM26 Ensembl G4806.1 TATTTTACCATATGGGTTTTAATG 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr13:79894214-79894238 NA NA NA NA UAUU minimal chr13 - 79933958 79933982 intron RBM26 Ensembl G4809.1 CTACTATACATTTATTTCTATTTC 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:79933958-79933982 minimal NA NA AUUUA UAUU minimal chr1 + 145512372 145512394 repeat Low_complexity-AT_rich RepeatMasker G481.1 ACATTATTAAATTTTTTATTTT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:145512372-145512394 minimal NA NA NA UAUU minimal chr13 - 79957465 79957486 intron RBM26 Ensembl G4810.1 CTTTTCTATTACTAATATATG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:79957465-79957486 NA NA NA NA UAUU minimal chr13 - 79973661 79973686 intron RBM26 Ensembl G4813.1 CTTTAAATTATCTTTTCCATTTATA 3 2 3 37 1 0.477121255 0 0 0 3 0 0 3 chr13:79973661-79973686 minimal NA NA AUUUA NA minimal chr1 + 145831036 145831060 repeat SINE-MIR RepeatMasker G482.1 CAACAATTTTTACCCATTATTATT 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:145831036-145831060 minimal NA NA NA UAUU minimal chr13 - 93003132 93003152 NoAnnotation G4830.1 ATATCTATATTTTTATTCCT 5 2 2 58 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr13:93003132-93003152 minimal NA NA NA UAUU minimal chr13 - 95226539 95226562 3'utr TGDS Ensembl G4833.1 CATATCTAACACTTTTTAAATTG 3 3 3 27 1 0.477121255 0 0 0 3 0 0 3 chr13:95226539-95226562 NA NA NA NA NA NA chr13 - 95839894 95839919 intron ABCC4 Ensembl G4837.1 ATTTATTATTTATTTTTATTTATTC 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr13:95839894-95839919 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr13 - 96678802 96678831 intron UGGT2 Ensembl G4847.1 AAACTTATTTATAATATTTATTAAATATT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr13:96678802-96678831 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr13 - 100615490 100615515 3'utr ZIC5 Ensembl G4853.1 TTTTATTTATACAACTTTTTCAATG 10 5 10 122 1 1 0 0.285714286 0.5 5 0 0 10 chr13:100615490-100615515 UUAUUUAU NA NA AUUUA UAUU minimal chr13 - 100616946 100616976 3'utr ZIC5 Ensembl G4856.1 ATCTTAGCTTAATACAATATTTTTATACAG 8 6 8 72 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr13:100616946-100616976 minimal NA NA NA UAUU minimal chr13 - 100616980 100617006 3'utr ZIC5 Ensembl G4857.1 TAATTTTTAATTTCCACTCTTTTATT 10 6 10 119 1 1 0 0.285714286 0.5 5 0 0 10 chr13:100616980-100617006 minimal NA NA NA UAUU minimal chr13 - 100617450 100617473 3'utr ZIC5 Ensembl G4858.1 TACATTTAATTAATTTAATTAAG 31 6 28 308 0.903225806 1.447158031 0 0.615384615 0.838709677 5 3 0 28 chr13:100617450-100617473 minimal NA NA AUUUA NA minimal chr1 + 149816053 149816078 NoAnnotation G486.1 GTTTCATTTAATCCTTTATTAATTC 13 7 12 155 0.923076923 1.079181246 0 0.3 0.461538462 7 1 0 12 chr1:149816053-149816078 minimal NA NA AUUUA UAUU minimal chr13 - 100617607 100617630 3'utr ZIC5 Ensembl G4860.1 AATTTATTATTAATAATAATAAG 4 3 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:100617607-100617630 minimal NA NA AUUUA UAUU minimal chr13 - 103418503 103418533 3'utr C13orf27 Ensembl G4863.1 TCTACATATAATTTATTTTCATTAGTATAG 27 3 27 359 0.964285714 1.130333768 0 0.333333333 0.714285714 8 0 1 27 chr13:103418503-103418533 minimal NA NA AUUUA UAUU minimal chr13 - 107144237 107144258 3'utr EFNB2 Ensembl G4866.1 CTATACTTATCACATTTTATT 4 2 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr13:107144237-107144258 minimal NA NA NA UAUU minimal chr13 - 107209801 107209834 intron ARGLU1 Ensembl G4867.1 ACAAATATTCACTTTATTTATATTTTATATATT 20 8 18 221 0.9 1.255272505 0 0.285714286 0.5 10 2 0 18 chr13:107209801-107209834 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 149816081 149816101 NoAnnotation G487.1 ACTTTATATATTTTTATTAG 9 2 8 100 0.888888889 0.903089987 1 0.5 0.777777778 2 1 0 8 chr1:149816081-149816101 minimal NA NA NA UAUU minimal chr13 - 108859804 108859833 3'utr LIG4 Ensembl G4870.1 TTATACTTCTTAATTTAAATAAAATATTT 10 3 4 115 0.363636364 0.301029996 0 0.375 0.545454545 5 6 1 4 chr13:108859804-108859833 minimal NA NA AUUUA UAUU minimal chr13 - 110406472 110406498 3'utr IRS2 Ensembl G4873.1 ACTTACCTTAAATTTAAAATATTTTT 11 5 8 106 0.727272727 0.903089987 0 0.1 0.181818182 9 3 0 8 chr13:110406472-110406498 minimal NA NA AUUUA UAUU minimal chr13 - 110407074 110407094 3'utr IRS2 Ensembl G4875.1 TCTTAAAAATATATTTAATG 4 2 4 26 1 0.602059991 0 0.5 0.75 1 0 0 4 chr13:110407074-110407094 minimal NA NA AUUUA UAUU minimal chr13 - 110407936 110407960 3'utr IRS2 Ensembl G4876.1 ATTACTAAATAATAATTATTATAT 9 5 8 82 0.888888889 0.903089987 0 0.125 0.222222222 7 1 0 8 chr13:110407936-110407960 minimal NA NA NA UAUU minimal chr13 - 113139733 113139759 3'utr TUBGCP3 Ensembl G4879.1 CATTACCTTTACACATATTTATTCTT 18 7 16 182 0.8 0.726998728 0 0.285714286 0.5 10 2 2 16 chr13:113139733-113139759 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 149817965 149818002 NoAnnotation G488.1 TAACTTGGGAGTGAAATTAGTAAAATTCTATCAATTT 5 2 4 37 0.8 0.602059991 0 0 0 5 1 0 4 chr1:149817965-149818002 NA NA NA NA NA NA chr13 - 113832080 113832108 3'utr PCID2 Ensembl G4882.1 ATACATCTATTTTTATATATTAAATTTG 4 4 4 50 1 0.602059991 0 0 0 4 0 0 4 chr13:113832080-113832108 minimal NA NA NA UAUU minimal chr13 - 113837229 113837256 intron PCID2 Ensembl G4883.1 ATACTTTTATTAATTTATTAATTTCAG 3 2 2 43 0.5 0 0 0 0 4 1 1 2 chr13:113837229-113837256 minimal NA NA AUUUA UAUU minimal chr13 - 114111617 114111640 3'utr DCUN1D2 Ensembl G4885.1 CCTCTCTTACTTAAATATTATTT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr13:114111617-114111640 minimal NA NA NA UAUU minimal chr13 - 114134078 114134104 repeat DNA-Tigger3b RepeatMasker G4886.1 CTTATTTACTCAACTTTTTATTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr13:114134078-114134104 minimal NA NA AUUUA UAUU minimal chr14 + 21101174 21101196 tRNA tRNA-tRNA-Pro-CCA RepeatMasker G4891.1 TCTAGTGGTATGATTCTCGCTT 42 2 2 365 0.044117647 -0.954242509 0.632352941 0.368421053 0.647058824 24 39 26 3 chr14:21101174-21101196 NA NA NA NA NA NA chr14 + 21965287 21965307 3'utr TOX4 Ensembl G4892.1 ATTTCTCTTTATATATATTA 5 2 4 56 0.8 0.602059991 0 0.666666667 0.8 1 1 0 4 chr14:21965287-21965307 minimal NA NA NA UAUU minimal chr14 + 23780823 23780845 3'utr BCL2L2 Ensembl G4896.1 CTCTATAAATATAAATCTATAT 3 3 3 23 1 0.477121255 0 0 0 3 0 0 3 chr14:23780823-23780845 NA NA NA NA NA NA chr1 + 16266838 16266870 3'utr SPEN Ensembl G49.1 ATCTCTTCCCCCAACTTCCTAACACTTATTAA 27 4 23 205 0.766666667 0.759667845 0 0.333333333 0.533333333 14 4 3 23 chr1:16266838-16266870 minimal NA NA NA UAUU minimal chr14 + 31040843 31040869 intron G2E3 Ensembl G4910.1 CATTCAGTTATTTCAATACTATTTAT 4 2 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:31040843-31040869 minimal NA NA AUUUA UAUU minimal chr14 + 31060555 31060581 3'utr G2E3 Ensembl G4912.1 ATTCATTTAATAATTTTTCTATTTAT 3 2 3 43 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr14:31060555-31060581 minimal NA NA AUUUA UAUU minimal chr14 + 31071604 31071626 repeat DNA-MER112 RepeatMasker G4913.1 TATCTATCCTAATTATTTTTTT 2 2 2 26 1 0.301029996 0.5 0 0 2 0 0 2 chr14:31071604-31071626 minimal NA NA NA UAUU minimal chr14 + 31082196 31082219 intron G2E3 Ensembl G4915.1 CATTCATTTAATAACTATTTATT 6 3 4 67 0.666666667 0.602059991 0.166666667 0.2 0.333333333 4 2 0 4 chr14:31082196-31082219 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 + 31087083 31087105 3'utr G2E3 Ensembl G4918.1 TCCTTAATCTATTAACATATTT 21 6 15 201 0.681818182 0.875061263 0 0.333333333 0.545454545 10 6 1 15 chr14:31087083-31087105 NA NA NA NA UAUU minimal chr14 + 31088025 31088046 3'utr G2E3 Ensembl G4920.1 TTCTTTTCTTATTAATTTTAT 5 3 4 70 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr14:31088025-31088046 minimal NA NA NA UAUU minimal chr14 + 31088111 31088132 3'utr G2E3 Ensembl G4921.1 TACATATATTTCTTAAATATT 3 3 3 30 1 0.477121255 0.333333333 0 0 3 0 0 3 chr14:31088111-31088132 NA NA NA NA UAUU minimal chr14 + 31108752 31108776 intron SCFD1 Ensembl G4925.1 TTATTCTCCTCCTTCATATTTATT 5 2 5 65 1 0.698970004 0.2 0.5 0.8 1 0 0 5 chr14:31108752-31108776 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 150439086 150439108 repeat Low_complexity-AT_rich RepeatMasker G493.1 CTTCATTATTTATTATTTTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:150439086-150439108 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 32608281 32608310 intron ARHGAP5 Ensembl G4933.1 TATAATCTTAATATTCTATTCTTAATATT 4 4 4 50 1 0.602059991 0 0 0 4 0 0 4 chr14:32608281-32608310 NA NA NA NA UAUU minimal chr14 + 32625506 32625532 3'utr ARHGAP5 Ensembl G4934.1 TTATCTTAATTCATACTACAATTTAA 8 3 8 77 1 0.903089987 0 0.4 0.625 3 0 0 8 chr14:32625506-32625532 minimal NA NA AUUUA NA minimal chr14 + 32625720 32625742 3'utr ARHGAP5 Ensembl G4935.1 TATATTATAAATTATCTTATTT 17 6 13 195 0.764705882 1.113943352 0.235294118 0.230769231 0.411764706 10 4 0 13 chr14:32625720-32625742 minimal NA NA NA UAUU minimal chr14 + 32625852 32625900 3'utr ARHGAP5 Ensembl G4936.1 TAAATGTAGTATTCTTAACCTGTTCTATATTACTTATACCTATTGTCT 29 11 26 305 0.896551724 1.414973348 0.379310345 0.333333333 0.586206897 12 3 0 26 chr14:32625852-32625900 minimal NA NA NA UAUU minimal chr14 + 32625999 32626022 3'utr ARHGAP5 Ensembl G4937.1 AATTTATTTTTCTACTATATATG 30 11 28 356 0.933333333 1.447158031 0.3 0.333333333 0.533333333 14 2 0 28 chr14:32625999-32626022 minimal NA NA AUUUA UAUU minimal chr14 + 32627055 32627078 3'utr ARHGAP5 Ensembl G4940.1 AATCTAATTAATATCTCTTAGGT 5 2 5 42 1 0.698970004 0.6 0.666666667 0.8 1 0 0 5 chr14:32627055-32627078 NA NA NA NA NA NA chr14 + 35550513 35550536 repeat Low_complexity-AT_rich RepeatMasker G4947.1 ACTTAATACAATTATTTATATTT 6 4 6 60 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr14:35550513-35550536 UUAUUUAU NA NA AUUUA UAUU minimal chr14 + 35550861 35550884 3'utr FAM177A1 Ensembl G4948.1 CATTTATATATCTAACCATTAAT 4 2 4 34 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:35550861-35550884 minimal NA NA AUUUA NA minimal chr14 + 37147898 37147919 3'utr PAX9 Ensembl G4958.1 TTATTTTCTTTATCTAAATTA 4 2 4 48 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr14:37147898-37147919 minimal NA NA NA UAUU minimal chr14 + 37741182 37741205 intron MIPOL1 Ensembl G4963.1 ATACTTTACATATTTATTTATTG 4 2 4 48 1 0.602059991 1 0.5 0.75 1 0 0 4 chr14:37741182-37741205 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 37747207 37747230 intron MIPOL1 Ensembl G4965.1 CTATACTAAATATTTTTCTCCTT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:37747207-37747230 NA NA NA NA UAUU minimal chr14 + 37858721 37858743 repeat Low_complexity-AT_rich RepeatMasker G4968.1 TCAATTTTTATATTATATATTT 3 2 2 40 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr14:37858721-37858743 minimal NA NA NA UAUU minimal chr14 + 38019232 38019252 repeat Low_complexity-AT_rich RepeatMasker G4969.1 TTATTAATTATTAATATATG 3 3 3 30 1 0.477121255 1 0 0 3 0 0 3 chr14:38019232-38019252 minimal NA NA NA UAUU minimal chr14 + 39651475 39651510 3'utr PNN Ensembl G4974.1 ACACTTGTATAATAAATATCCTCTTTATCATTTTC 15 6 15 146 1 1.176091259 0 0.166666667 0.333333333 10 0 0 15 chr14:39651475-39651510 minimal NA NA NA NA NA chr14 + 39651649 39651671 3'utr PNN Ensembl G4975.1 CTATTTTCTATTCTCCCTTGTT 7 4 5 65 0.857142857 0.77815125 0.714285714 0.166666667 0.285714286 5 1 0 6 chr14:39651649-39651671 NA NA NA NA UAUU minimal chr1 + 151008161 151008183 3'utr PRUNE Ensembl G498.1 TTATACTATTAAATAATTTTTT 8 3 6 93 0.75 0.77815125 0 0.166666667 0.375 5 2 0 6 chr1:151008161-151008183 minimal NA NA NA UAUU minimal chr14 + 45475805 45475825 intron FAM179B Ensembl G4986.1 TTTCCTATATTTAAATAAAT 2 2 2 18 1 0.301029996 0.5 0 0 2 0 0 2 chr14:45475805-45475825 minimal NA NA AUUUA UAUU minimal chr14 + 45475880 45475900 intron FAM179B Ensembl G4987.1 CAATCACTATTACCATTTAT 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr14:45475880-45475900 minimal NA NA AUUUA UAUU minimal chr14 + 45475920 45475945 repeat Low_complexity-AT_rich RepeatMasker G4988.1 TACTTTTTATATTAATATTATTTTT 3 2 3 40 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:45475920-45475945 minimal NA NA NA UAUU minimal chr14 + 45499590 45499612 repeat SINE-MIRb RepeatMasker G4989.1 TAATATACTACTAATAATTACT 4 2 4 32 1 0.602059991 0 0.5 0.75 1 0 0 4 chr14:45499590-45499612 NA NA NA NA NA NA chr1 + 151021492 151021512 intron C1orf56 Ensembl G499.1 ATTCCACCTATTATTTATTG 4 3 4 36 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr1:151021492-151021512 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 45543093 45543119 3'utr FAM179B Ensembl G4990.1 TAATTAAAAATACACATTTTATTATG 5 2 5 42 1 0.698970004 0.4 0.666666667 0.8 1 0 0 5 chr14:45543093-45543119 minimal NA NA NA UAUU minimal chr14 + 45583986 45584006 intron PRPF39 Ensembl G4992.1 CTTTAATTATACTTTTACAT 2 2 2 20 1 0.301029996 0.5 0 0 2 0 0 2 chr14:45583986-45584006 minimal NA NA NA NA NA chr14 + 45637645 45637666 repeat Low_complexity-AT_rich RepeatMasker G4994.1 CTAATTAATCTTATATTTAAT 4 4 4 39 1 0.602059991 0 0 0 4 0 0 4 chr14:45637645-45637666 minimal NA NA AUUUA UAUU minimal chr14 + 50089608 50089629 3'utr MGAT2 Ensembl G4999.1 CATTTATTAATCTTTTTATCT 10 6 8 116 0.8 0.903089987 0.1 0.428571429 0.6 4 2 0 8 chr14:50089608-50089629 minimal NA NA AUUUA UAUU minimal chr14 + 50090125 50090146 3'utr MGAT2 Ensembl G5000.1 CATTACATTTTAATATTTACT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:50090125-50090146 minimal NA NA AUUUA UAUU minimal chr14 + 50792968 50792997 intron ATP5S Ensembl G5002.1 TAAACTAGGTAACATTTTAATTCTAATAT 6 2 4 56 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr14:50792968-50792997 NA NA NA NA NA NA chr14 + 51723889 51723920 NoAnnotation G5006.1 CTATTCATAAATAACCATAATTATTCAGTAT 5 2 5 48 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr14:51723889-51723920 minimal NA NA NA UAUU minimal chr14 + 55511106 55511134 repeat Low_complexity-AT_rich RepeatMasker G5016.1 ATAATATATATTTTTTCTTTTAATATTT 10 5 9 157 0.9 0.954242509 0 0.111111111 0.2 8 1 0 9 chr14:55511106-55511134 NA NA NA NA UAUU minimal chr14 + 55511322 55511354 3'utr SOCS4 Ensembl G5017.1 TATACTTACATTTTTTCTTTCCTTAATTTATA 48 10 42 664 0.875 1.62324929 0 0.222222222 0.416666667 28 6 0 42 chr14:55511322-55511354 minimal NA NA AUUUA NA minimal chr14 + 55511358 55511378 3'utr SOCS4 Ensembl G5018.1 ATCCTTTTTCCTTAATTTAT 15 5 10 170 0.666666667 1 0 0.571428571 0.8 3 5 0 10 chr14:55511358-55511378 minimal NA NA AUUUA NA minimal chr14 + 55511436 55511456 3'utr SOCS4 Ensembl G5019.1 TATTTCATACTATTCTTTAA 7 2 6 70 0.857142857 0.77815125 0 0.5 0.714285714 2 1 0 6 chr14:55511436-55511456 NA NA NA NA UAUU minimal chr1 + 151221767 151221797 3'utr PIP5K1A Ensembl G502.1 CTATTTTTTTTTCATAATTTACTATTTATG 96 13 74 1488 0.762886598 1.568201724 0.144329897 0.366666667 0.608247423 38 22 1 74 chr1:151221767-151221797 minimal NA NA AUUUA UAUU minimal chr14 + 55511588 55511610 3'utr SOCS4 Ensembl G5020.1 TAATTCACCATTCATACTAATG 7 2 7 48 1 0.84509804 0.571428571 0.5 0.714285714 2 0 0 7 chr14:55511588-55511610 NA NA NA NA NA NA chr14 + 55511674 55511697 repeat Low_complexity-AT_rich RepeatMasker G5021.1 TATTTTTATTTTAAATATTAACT 4 2 3 52 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr14:55511674-55511697 minimal NA NA NA UAUU minimal chr14 + 55512302 55512322 3'utr SOCS4 Ensembl G5022.1 ATATTTTAAATTTACTATCC 4 2 4 36 1 0.602059991 0 1 1 0 0 0 4 chr14:55512302-55512322 minimal NA NA AUUUA UAUU minimal chr14 + 55512564 55512606 3'utr SOCS4 Ensembl G5023.1 ACTCATAAACTTCCAAGTTAGAACAAATATTTCTTCATTATT 11 4 11 91 0.916666667 0.740362689 0.666666667 0.25 0.5 6 0 1 11 chr14:55512564-55512606 minimal NA NA NA UAUU minimal chr14 + 55530351 55530376 intron MAPK1IP1L Ensembl G5026.1 TTTTATTATTATTATTTCTCAGTAT 5 2 5 70 1 0.698970004 0 0.25 0.4 3 0 0 5 chr14:55530351-55530376 minimal NA NA NA UAUU minimal chr14 + 55531164 55531189 intron MAPK1IP1L Ensembl G5028.1 CTATATATATTATCTAAAAATATTT 5 4 5 50 0.833333333 0.397940009 0 0.2 0.333333333 4 0 1 5 chr14:55531164-55531189 minimal NA NA NA UAUU minimal chr14 + 56079295 56079318 intron KTN1 Ensembl G5032.1 TAATCTATTTAATCTATTTAATT 5 3 4 55 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr14:56079295-56079318 minimal NA NA AUUUA UAUU minimal chr14 + 56132761 56132783 intron KTN1 Ensembl G5033.1 CATTAATTATTTTCCTTATTTT 2 2 2 26 1 0.301029996 0.5 0 0 2 0 0 2 chr14:56132761-56132783 minimal NA NA NA UAUU minimal chr14 + 57114869 57114897 repeat Low_complexity-AT_rich RepeatMasker G5036.1 CATTTACTTAATTAATTTTATATTTATG 12 4 9 164 0.75 0.954242509 0.166666667 0.5 0.666666667 4 3 0 9 chr14:57114869-57114897 minimal NA NA AUUUA UAUU minimal chr14 + 57761257 57761288 NoAnnotation G5040.1 CTAATTTATTTATATTAACTCTTATTAATTT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr14:57761257-57761288 UUAUUUAU NA NA AUUUA UAUU minimal chr14 + 58701293 58701318 3'utr ACTR10 Ensembl G5048.1 CTTCATATCAAATATTTAACCAATT 3 2 3 27 1 0.477121255 0 0 0 3 0 0 3 chr14:58701293-58701318 minimal NA NA AUUUA UAUU minimal chr14 + 58701401 58701421 3'utr ACTR10 Ensembl G5049.1 CATTAATATATAATTCTTTT 4 2 4 40 1 0.602059991 0.75 0.5 0.75 1 0 0 4 chr14:58701401-58701421 NA NA NA NA NA NA chr14 + 60608760 60608780 repeat LINE-L1ME1 RepeatMasker G5050.1 CAAACTAATCTATAATAATG 3 2 3 15 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr14:60608760-60608780 NA NA NA NA NA NA chr14 + 60744214 60744238 repeat Low_complexity-AT_rich RepeatMasker G5051.1 TTACATTTTTATATACTAATTTAT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr14:60744214-60744238 minimal NA NA AUUUA NA minimal chr14 + 60749822 60749851 coding PPM1A Ensembl G5052.1 TTCTCCCCAACATACTTATTTCATTAACT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:60749822-60749851 minimal NA NA NA UAUU minimal chr14 + 60760993 60761014 3'utr PPM1A Ensembl G5055.1 TAACTTAATTGTATTTAATTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr14:60760993-60761014 minimal NA NA AUUUA UAUU minimal chr14 + 61289122 61289148 repeat Low_complexity-AT_rich RepeatMasker G5060.1 CATACTTTTTAAATTATTTATTTATT 4 3 3 57 0.75 0.477121255 0 0 0 4 1 0 3 chr14:61289122-61289148 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 62213934 62213954 3'utr HIF1A Ensembl G5066.1 ATCCCCTTTCTACTTAATTT 4 3 4 36 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:62213934-62213954 NA NA NA NA NA NA chr14 + 62262023 62262048 repeat Low_complexity-AT_rich RepeatMasker G5067.1 TAATACTATTCTATTTTATTTAAAA 17 6 14 201 0.777777778 0.84509804 0 0.0625 0.166666667 15 3 1 14 chr14:62262023-62262048 minimal NA NA AUUUA UAUU minimal chr14 + 64990479 64990499 3'utr ZBTB1 Ensembl G5074.1 CCCTTTTAACTTTAATATTT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr14:64990479-64990499 NA NA NA NA UAUU minimal chr14 + 65939689 65939714 repeat Low_complexity-AT_rich RepeatMasker G5077.1 ACAACTTATTTATAACTTTTATTTA 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:65939689-65939714 UUAUUUAU NA NA AUUUA UAUU minimal chr14 + 67002540 67002560 intron GPHN Ensembl G5081.1 CTTATTTTTAATATTTAATA 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:67002540-67002560 minimal NA NA AUUUA UAUU minimal chr14 + 67164568 67164590 intron GPHN Ensembl G5085.1 CTACTTTTTACAATTATTATTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:67164568-67164590 minimal NA NA NA UAUU minimal chr14 + 67850546 67850567 3'utr EIF2S1 Ensembl G5088.1 CAAACATCAAATAAATTTCTG 5 2 4 26 0.8 0.602059991 0.4 0.25 0.4 3 1 0 4 chr14:67850546-67850567 NA NA NA NA NA NA chr14 + 67851268 67851292 3'utr EIF2S1 Ensembl G5090.1 TATTTAATTTTATTCATTATCCCT 11 4 11 131 1 1.041392685 0 0.285714286 0.545454545 5 0 0 11 chr14:67851268-67851292 minimal NA NA AUUUA UAUU minimal chr14 + 68355599 68355624 repeat DNA-MER2 RepeatMasker G5091.1 ACTATATATTCTTATTTTATTATTA 4 3 4 50 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:68355599-68355624 minimal NA NA NA UAUU minimal chr14 + 68563582 68563603 repeat LINE-L4 RepeatMasker G5094.1 ATTTCATCTTTCTTAATTATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr14:68563582-68563603 minimal NA NA NA UAUU minimal chr14 + 69731302 69731326 repeat Low_complexity-AT_rich RepeatMasker G5095.1 ATCTAAAATAATTTATATTTTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:69731302-69731326 minimal NA NA AUUUA UAUU minimal chr14 + 69925560 69925581 intron SLC39A9 Ensembl G5096.1 TTTTAATATTTCTCTTAACCC 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:69925560-69925581 NA NA NA NA UAUU minimal chr14 + 69926546 69926567 intron SLC39A9 Ensembl G5098.1 AATTCTTATCAGGACAACCAC 3 2 2 13 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:69926546-69926567 minimal NA NA NA NA NA chr14 + 71576955 71576976 3'utr PCNX Ensembl G5104.1 CTTTAAATCAACAAACTCTTC 3 3 3 18 0.75 0.176091259 0 0 0 4 0 1 3 chr14:71576955-71576976 NA NA NA NA NA NA chr14 + 71577742 71577769 3'utr PCNX Ensembl G5106.1 TTATTATTATATCCCTCTTTAATAATT 4 3 4 51 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr14:71577742-71577769 minimal NA NA NA UAUU minimal chr14 + 71837774 71837794 NoAnnotation G5110.1 ATCTTTAATTCTATTTATTA 5 3 5 55 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr14:71837774-71837794 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 + 73571675 73571699 intron RBM25 Ensembl G5113.1 TAAAATCCATCTCTTATATTTATG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr14:73571675-73571699 minimal NA NA AUUUA UAUU minimal chr14 + 73587303 73587325 3'utr RBM25 Ensembl G5116.1 ATTTTTCCTTTTAATTTTATTG 4 3 4 56 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr14:73587303-73587325 minimal NA NA NA UAUU minimal chr1 + 152288967 152288989 lincRNA RP1-14N1.2 Ensembl G512.1 AATTACAAATAATTTTATTATT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:152288967-152288989 minimal NA NA NA UAUU minimal chr14 + 74322137 74322163 repeat DNA-Tigger3c RepeatMasker G5123.1 CAATTACTTTATTTTTATTATTTATT 4 2 2 66 0.4 0 0 0 0 5 2 1 2 chr14:74322137-74322163 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 74329777 74329802 intron RP5-1021I20.4 Ensembl G5124.1 ACAACTAAATTATTTTTAGTATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr14:74329777-74329802 minimal NA NA NA UAUU minimal chr14 + 74667447 74667470 3'utr LIN52 Ensembl G5126.1 ATTTTAATTTAAACTTATTATCG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr14:74667447-74667470 minimal NA NA AUUUA UAUU minimal chr14 + 75203346 75203368 repeat LINE-L1MA7 RepeatMasker G5130.1 TAACCCATACATTTATACAATT 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:75203346-75203368 minimal NA NA AUUUA NA minimal chr14 + 75288571 75288592 intron YLPM1 Ensembl G5132.1 AATATTACTCGGTTTATTTAA 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:75288571-75288592 minimal NA NA AUUUA UAUU minimal chr14 + 80330307 80330327 3'utr NRXN3 Ensembl G5141.1 TTCCTCATTATCTAATATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:80330307-80330327 minimal NA NA NA UAUU minimal chr14 + 84482200 84482221 NoAnnotation G5145.1 TAAATATTTTTCCTAAATTTT 26 3 3 309 0.090909091 -0.425968732 0.212121212 0.4 0.909090909 3 23 7 3 chr14:84482200-84482221 NA NA NA NA UAUU minimal chr14 + 89080772 89080792 NoAnnotation G5153.1 TCATTTCTATTTTTAGTATT 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr14:89080772-89080792 NA NA NA NA UAUU minimal chr14 + 90873633 90873655 repeat Low_complexity-AT_rich RepeatMasker G5160.1 CCCCTACTTCTAACTACTCTAT 4 3 4 27 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:90873633-90873655 NA NA NA NA NA NA chr14 + 90873942 90873964 3'utr CALM1 Ensembl G5161.1 TACATATTTTTATATTCTCTTT 5 4 5 63 1 0.698970004 0 0.25 0.4 3 0 0 5 chr14:90873942-90873964 minimal NA NA NA UAUU minimal chr14 + 92592447 92592468 5'utr CPSF2 Ensembl G5163.1 CTTTTATTTATTTTTTAGATT 5 2 5 69 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr14:92592447-92592468 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 + 92627909 92627930 intron CPSF2 Ensembl G5165.1 TAATCTATTTCATATATTTCG 3 2 3 30 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr14:92627909-92627930 NA NA NA NA UAUU minimal chr14 + 93694317 93694346 3'utr UBR7 Ensembl G5168.1 TTATTAGAACCCCAATAAATTATTATTTT 6 2 5 51 1 0.77815125 0 0.25 0.5 3 0 0 6 chr14:93694317-93694346 minimal NA NA NA UAUU minimal chr14 + 93695495 93695516 3'utr UBR7 Ensembl G5169.1 ACTTATAATTACATACTTAAC 5 2 3 37 0.5 0.176091259 0 0.2 0.333333333 4 2 1 3 chr14:93695495-93695516 minimal NA NA NA NA NA chr14 + 96559821 96559845 3'utr C14orf132 Ensembl G5176.1 CATACTAATATTCTTTATACTATT 10 3 7 104 0.7 0.84509804 0 0.25 0.4 6 3 0 7 chr14:96559821-96559845 minimal NA NA NA UAUU minimal chr14 + 96852525 96852549 3'utr C14orf129 Ensembl G5178.1 CTTCACTTAATCTATTTATATTAC 27 9 24 284 0.857142857 1.079181246 0 0.227272727 0.392857143 17 3 1 24 chr14:96852525-96852549 minimal NA NA AUUUA UAUU minimal chr14 + 96852571 96852597 3'utr C14orf129 Ensembl G5179.1 AATTAATTATATATTACTTAACTAGT 8 4 7 78 0.875 0.84509804 0.25 0 0 8 1 0 7 chr14:96852571-96852597 minimal NA NA NA UAUU minimal chr1 + 153610198 153610222 intron CHTOP Ensembl G518.1 TCTATTTTTGCCTCTTCTGAGGCA 6 2 4 60 0.666666667 0.602059991 0 0.25 0.5 3 2 0 4 chr1:153610198-153610222 NA NA NA NA UAUU minimal chr14 + 97001129 97001153 3'utr PAPOLA Ensembl G5181.1 ATTTTACTAACATTTTAATTTATT 8 5 8 102 1 0.903089987 0 0.4 0.625 3 0 0 8 chr14:97001129-97001153 minimal NA NA AUUUA UAUU minimal chr14 + 97023036 97023056 intron PAPOLA Ensembl G5184.1 TATTCTTAACTTATTATTCT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:97023036-97023056 minimal NA NA NA UAUU minimal chr14 + 97335602 97335630 intron VRK1 Ensembl G5188.1 TTATTTAATCCACTATTTAACTTTTCCC 5 3 3 57 0.6 0.477121255 0 0 0 5 2 0 3 chr14:97335602-97335630 minimal NA NA AUUUA UAUU minimal chr14 + 97352933 97352962 NoAnnotation G5190.1 CCATTTTACTTATTAATTCTAATTTATTG 4 2 2 59 0.5 0.301029996 0.75 0.333333333 0.5 2 2 0 2 chr14:97352933-97352962 minimal NA NA AUUUA UAUU minimal chr14 + 99960007 99960029 intron CCNK Ensembl G5193.1 CTCTATTTTTCTCATATTTTCC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:99960007-99960029 NA NA NA NA UAUU minimal chr14 + 100744299 100744320 3'utr YY1 Ensembl G5194.1 CTTACAATTTTTTTAATTTTG 6 4 5 73 0.833333333 0.698970004 1 0.2 0.333333333 4 1 0 5 chr14:100744299-100744320 NA NA NA NA NA NA chr14 + 100744320 100744343 3'utr YY1 Ensembl G5195.1 TATTTTCCAAGTGTGCATATTGT 3 2 3 28 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:100744320-100744343 NA NA NA NA UAUU minimal chr14 + 100747549 100747571 repeat Low_complexity-AT_rich RepeatMasker G5197.1 ATCTTTAATTATTTAATTATTC 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr14:100747549-100747571 minimal NA NA AUUUA UAUU minimal chr1 + 20235289 20235313 3'utr OTUD3 Ensembl G52.1 CTACATTTATTTCTTTTTATTTAA 7 4 5 96 0.714285714 0.698970004 0.428571429 0 0 7 2 0 5 chr1:20235289-20235313 minimal NA NA AUUUA UAUU minimal chr14 + 101377522 101377544 miRNA hsa-mir-370 miRBase G5200.1 GCCTGCTGGGGTGGAACCTGGT 67 2 3 332 0.034090909 -0.865301426 0 0.411764706 0.886363636 10 64 21 3 chr14:101377522-101377544 NA NA NA NA NA NA chr14 + 102516939 102516969 3'utr DYNC1H1 Ensembl G5206.1 TATTTAACATTTATTCATTTTTAAAATATT 21 6 16 280 0.761904762 1.204119983 0 0.333333333 0.523809524 10 5 0 16 chr14:102516939-102516969 minimal NA NA AUUUA UAUU minimal chr14 + 102791745 102791767 repeat DNA-MER112 RepeatMasker G5208.1 TTCCATCAACTTTATTTTATTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:102791745-102791767 minimal NA NA NA UAUU minimal chr14 + 102898727 102898749 intron TECPR2 Ensembl G5210.1 TACTTTTCAATATTTATTTATG 4 2 4 46 1 0.602059991 1 1 1 0 0 0 4 chr14:102898727-102898749 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 + 102968102 102968123 snRNA U6 Ensembl G5211.1 CTTTCCATAAATATATTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:102968102-102968123 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 + 103291058 103291086 intron TRAF3 Ensembl G5215.1 CTAAATTACTAATTTCATTACTACTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:103291058-103291086 NA NA NA NA UAUU minimal chr14 + 105936875 105936897 repeat Low_complexity-AT_rich RepeatMasker G5226.1 CCATTTTAAATTTTATTTTTAT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr14:105936875-105936897 minimal NA NA NA UAUU minimal chr14 - 20783886 20783924 intron CCNB1IP1 Ensembl G5229.1 TAAATATTTTTTAGTTAACTATTCTATAATCATATTTT 3 2 3 34 1 0.477121255 0 0 0 3 0 0 3 chr14:20783886-20783924 NA NA NA NA UAUU minimal chr14 - 21677264 21677287 NoAnnotation G5237.1 AACTTTTTTTATTTATATTTTTG 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr14:21677264-21677287 UUAUUUAU NA NA AUUUA UAUU minimal chr14 - 21678075 21678097 3'utr HNRNPC Ensembl G5238.1 TTTTCCTCAACTTTATTAATTA 4 3 4 42 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:21678075-21678097 minimal NA NA NA UAUU minimal chr14 - 21678128 21678152 3'utr HNRNPC Ensembl G5239.1 TTACACATTTATTTTACTCTAAAT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr14:21678128-21678152 minimal NA NA AUUUA UAUU minimal chr14 - 21678271 21678293 3'utr HNRNPC Ensembl G5240.1 TTCTTTTAATTACTATTTATAG 5 3 3 59 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr14:21678271-21678293 minimal NA NA AUUUA UAUU minimal chr14 - 21731362 21731404 5'utr HNRNPC Ensembl G5245.1 TTACTAGTTACTATTACTTATTATTATTATATTAATACTTAT 56 14 44 767 0.771929825 1.342422681 0.01754386 0.195652174 0.350877193 37 12 1 44 chr14:21731362-21731404 minimal NA NA NA UAUU minimal chr14 - 21734917 21734946 intron HNRNPC Ensembl G5247.1 TATTATTACTATTCTTAACCACATTATTT 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:21734917-21734946 minimal NA NA NA UAUU minimal chr14 - 21898526 21898550 intron CHD8 Ensembl G5252.1 CTATTTATATCTTTCTTTTATTCT 19 7 15 266 0.75 0.875061263 0 0.125 0.3 14 4 1 15 chr14:21898526-21898550 minimal NA NA AUUUA UAUU minimal chr14 - 21927661 21927696 3'utr RAB2B Ensembl G5253.1 TCATTCCTTTATTTTTATAAATTATTCCCCCTATC 3 2 3 38 0.75 0.176091259 0 0 0 4 0 1 3 chr14:21927661-21927696 minimal NA NA NA UAUU minimal chr14 - 21977040 21977065 intron METTL3 Ensembl G5256.1 TTCCTCATCATACTTATTTATTTAT 6 4 5 72 0.625 0.22184875 0 0.142857143 0.25 6 1 2 5 chr14:21977040-21977065 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 21986848 21986878 NoAnnotation G5257.1 CTTTTATTTCTATTTCTTTTCTCCCTTCAT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr14:21986848-21986878 minimal NA NA NA UAUU minimal chr14 - 23366516 23366542 NoAnnotation G5260.1 TCATCTTACTCTACTTTTATTTAGTA 6 4 6 71 1 0.77815125 0 0 0 6 0 0 6 chr14:23366516-23366542 minimal NA NA AUUUA UAUU minimal chr14 - 23491862 23491882 NoAnnotation G5263.1 CTCTATAATTTAAAATATAC 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr14:23491862-23491882 minimal NA NA AUUUA NA minimal chr14 - 23527858 23527882 3'utr ACIN1 Ensembl G5266.1 TTCCACTTTATATCCACCTTTTCC 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chr14:23527858-23527882 minimal NA NA NA NA NA chr14 - 23576438 23576468 NoAnnotation G5268.1 CATACACATTTATTTATTCATTTATTTAGA 16 5 14 204 0.777777778 0.669006781 0 0.2 0.333333333 12 2 2 14 chr14:23576438-23576468 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 23582467 23582495 NoAnnotation G5269.1 CTTCTCTTTTATTATTTATTTATTTATG 46 14 29 782 0.617021277 1.161368002 0 0.357142857 0.617021277 18 17 1 29 chr14:23582467-23582495 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 154963253 154963282 repeat Low_complexity-AT_rich RepeatMasker G527.1 CCATTAATTATTTATTTATACTTAAATTT 3 2 2 38 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:154963253-154963282 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 26915112 26915145 3'utr NOVA1 Ensembl G5276.1 CTATTATATTTACTCATTTTATCATTATAAATG 3 2 3 40 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:26915112-26915145 minimal NA NA AUUUA UAUU minimal chr14 - 31363634 31363657 3'utr STRN3 Ensembl G5282.1 CCTATTATTTATTTCACTTTTTG 19 5 16 241 0.761904762 0.726998728 0 0.166666667 0.523809524 10 3 2 16 chr14:31363634-31363657 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 31364062 31364091 3'utr STRN3 Ensembl G5283.1 AAATTTAACTTAAAATATTTTAGCATTAG 4 2 4 38 1 0.602059991 0 0 0 4 0 0 4 chr14:31364062-31364091 minimal NA NA AUUUA UAUU minimal chr14 - 31368554 31368577 intron STRN3 Ensembl G5284.1 TTTTCAATTTCTACTATTTATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr14:31368554-31368577 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 31569392 31569416 3'utr HECTD1 Ensembl G5286.1 TATATTATAAACATTTATTTAACT 12 4 6 127 0.5 0.77815125 0 0.333333333 0.5 6 6 0 6 chr14:31569392-31569416 minimal NA NA AUUUA UAUU minimal chr1 + 155300485 155300518 3'utr RUSC1 Ensembl G529.1 CTAATATTTAAAATAAACTTTCCTTCTTCCCTC 12 7 8 121 0.571428571 0.425968732 0 0.166666667 0.285714286 10 4 2 8 chr1:155300485-155300518 minimal NA NA AUUUA UAUU minimal chr14 - 34903741 34903768 3'utr SPTSSA Ensembl G5291.1 AACATTTCACCTTTTAAATATTTAATT 4 2 2 46 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr14:34903741-34903768 minimal NA NA AUUUA UAUU minimal chr14 - 35031986 35032008 3'utr SNX6 Ensembl G5292.1 CCACTCTTATTTACCTTTAAAT 3 2 2 28 0.5 0 0 0 0 4 1 1 2 chr14:35031986-35032008 minimal NA NA AUUUA UAUU minimal chr14 - 35180865 35180891 3'utr CFL2 Ensembl G5294.1 ATAAATTAGCATAGTTATTTTTTTAT 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:35180865-35180891 minimal NA NA NA UAUU minimal chr14 - 35180971 35181000 3'utr CFL2 Ensembl G5295.1 TACTTTTATAAACATTAGTGTATTTATTT 6 2 6 71 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr14:35180971-35181000 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 35222574 35222598 3'utr BAZ1A Ensembl G5297.1 CACTATATTCTCAATTTTAATATT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr14:35222574-35222598 NA NA NA NA UAUU minimal chr14 - 35870913 35870933 3'utr NFKBIA Ensembl G5301.1 ACCACATTTTATATTTATTG 27 5 25 245 0.925925926 1.397940009 0 1 1 0 2 0 25 chr14:35870913-35870933 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 36007635 36007657 3'utr RALGAPA1 Ensembl G5302.1 TATCATCATTCATGTAGTATCT 8 2 6 69 0.75 0.77815125 0 0.75 0.875 1 2 0 6 chr14:36007635-36007657 NA NA NA NA NA NA chr14 - 36768191 36768214 3'utr MBIP Ensembl G5309.1 ATATATATTTATCAATGTAGACT 6 2 6 51 1 0.77815125 0 0.5 0.833333333 1 0 0 6 chr14:36768191-36768214 minimal NA NA AUUUA UAUU minimal chr14 - 36781990 36782015 intron MBIP Ensembl G5310.1 TATATATTATTACTATGTAGTATCG 4 2 4 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:36781990-36782015 minimal NA NA NA UAUU minimal chr14 - 36783636 36783663 intron MBIP Ensembl G5312.1 CTCTAATCTTTTATTTATTTTTTAAAT 5 4 5 75 1 0.698970004 0 0.25 0.4 3 0 0 5 chr14:36783636-36783663 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 36784228 36784255 intron MBIP Ensembl G5313.1 TATACCAACTTTTTATATTTATTAACT 6 4 6 71 1 0.77815125 0 0 0 6 0 0 6 chr14:36784228-36784255 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 36787118 36787139 intron MBIP Ensembl G5314.1 TATTTATTCAATATATTATCT 4 2 4 44 1 0.602059991 0 0.5 0.75 1 0 0 4 chr14:36787118-36787139 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 37034265 37034290 NoAnnotation G5315.1 TATATATTTTATTTAATATCATAAT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:37034265-37034290 minimal NA NA AUUUA UAUU minimal chr14 - 38059413 38059434 3'utr FOXA1 Ensembl G5319.1 TTTCATTATTATTTCTCTTTG 6 2 6 78 1 0.77815125 0 1 1 0 0 0 6 chr14:38059413-38059434 minimal NA NA NA UAUU minimal chr14 - 38060442 38060471 3'utr FOXA1 Ensembl G5320.1 ATAATAAAATCCCAACAACTATTTTTATT 5 2 2 27 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr14:38060442-38060471 minimal NA NA NA UAUU minimal chr14 - 39619115 39619142 3'utr TRAPPC6B Ensembl G5322.1 CAAACATACTAAATTTTTTTTATTTTA 5 3 4 61 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr14:39619115-39619142 minimal NA NA NA UAUU minimal chr14 - 39868186 39868213 3'utr FBXO33 Ensembl G5324.1 ACTTTAACTTTCATTACATATCTAATA 3 2 2 28 0.5 0 0 0 0 4 1 1 2 chr14:39868186-39868213 NA NA NA NA NA NA chr14 - 45394017 45394043 NoAnnotation G5330.1 TCTTTTATATTATACATCTTTACTAG 3 2 3 37 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:45394017-45394043 minimal NA NA NA UAUU minimal chr14 - 45395629 45395654 NoAnnotation G5331.1 TATCATCTCCACTATCAAATTAGTG 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr14:45395629-45395654 NA NA NA NA NA NA chr14 - 45395684 45395712 NoAnnotation G5332.1 ATTTTAATTATAAACACATCTATTCTAT 5 3 5 44 1 0.698970004 0 0.25 0.4 3 0 0 5 chr14:45395684-45395712 minimal NA NA NA UAUU minimal chr14 - 45396351 45396379 NoAnnotation G5336.1 ATTATAAAACCTTGCAAGTGATTTTTAG 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:45396351-45396379 minimal NA NA NA NA NA chr14 - 45397363 45397385 NoAnnotation G5337.1 ATATTAATTTTTTTATATATCC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:45397363-45397385 minimal NA NA NA UAUU minimal chr14 - 45601023 45601051 intron FKBP3 Ensembl G5340.1 TATTAATCATAATCCCAATATTTATTAA 6 4 4 65 0.666666667 0.602059991 0 0 0 6 2 0 4 chr14:45601023-45601051 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 50043960 50043985 3'utr RPS29 Ensembl G5354.1 TTTATTTTTTAAAATTTTATTTATG 8 3 7 129 0.875 0.84509804 0 0.4 0.625 3 1 0 7 chr14:50043960-50043985 UUAUUUAU NA NA AUUUA UAUU minimal chr14 - 50092244 50092264 coding DNAAF2 Ensembl G5355.1 ATTAATTCTATATAATTTTG 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:50092244-50092264 NA NA NA NA NA NA chr14 - 50120204 50120230 intron POLE2 Ensembl G5356.1 TTTAACTATATTTAAATAATTTATTG 4 3 4 51 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:50120204-50120230 minimal NA NA AUUUA UAUU minimal chr14 - 50575904 50575933 3'utr METTL21D Ensembl G5360.1 TATTTTCCACTTCATTTCTTTTAAAATAT 4 2 2 55 0.4 0 0 0 0 5 2 1 2 chr14:50575904-50575933 NA NA NA NA UAUU minimal chr14 - 50575938 50575961 3'utr METTL21D Ensembl G5361.1 TACATAATTATACAATATTTATC 5 2 3 44 0.5 0.176091259 0 0 0 6 2 1 3 chr14:50575938-50575961 minimal NA NA AUUUA UAUU minimal chr14 - 51100568 51100598 3'utr SAV1 Ensembl G5373.1 ATACTTCTAAACTATAACTATAAATCTCTA 6 4 5 49 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr14:51100568-51100598 NA NA NA NA NA NA chr14 - 51100717 51100744 3'utr SAV1 Ensembl G5375.1 TATATTATTACTTTTTAATTTTCTAAG 15 7 13 217 0.866666667 1.113943352 0 0.272727273 0.466666667 8 2 0 13 chr14:51100717-51100744 minimal NA NA NA UAUU minimal chr14 - 51442314 51442337 3'utr TRIM9 Ensembl G5381.1 CTTACTTTATTTAGATTATTTCT 6 2 6 72 1 0.77815125 0 0.25 0.5 3 0 0 6 chr14:51442314-51442337 minimal NA NA AUUUA UAUU minimal chr14 - 51443703 51443728 3'utr TRIM9 Ensembl G5382.1 CTTTTATTTAACTTAATTTTTTATG 9 3 6 124 0.666666667 0.77815125 0 0.4 0.666666667 3 3 0 6 chr14:51443703-51443728 minimal NA NA AUUUA UAUU minimal chr14 - 53520516 53520540 intron DDHD1 Ensembl G5389.1 AATACACTTAGTATATATTTACTT 3 3 3 28 1 0.477121255 0 0 0 3 0 0 3 chr14:53520516-53520540 minimal NA NA AUUUA UAUU minimal chr14 - 54795702 54795724 NoAnnotation G5392.1 ACTAACATCCTTTTTATTATTA 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr14:54795702-54795724 minimal NA NA NA UAUU minimal chr14 - 54809144 54809170 NoAnnotation G5393.1 TCATATCATTATTTATTTATTTATTT 4 2 2 62 0.5 0.301029996 0 0 0 4 2 0 2 chr14:54809144-54809170 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 54894119 54894146 3'utr CNIH Ensembl G5394.1 TATCTAATTATAAATTAGCTGTAGATA 28 2 28 224 1 1.447158031 0 0.75 0.964285714 1 0 0 28 chr14:54894119-54894146 minimal NA NA NA NA NA chr14 - 55406714 55406736 3'utr WDHD1 Ensembl G5397.1 AATACTATACAAACTAATTTTG 4 3 4 27 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:55406714-55406736 NA NA NA NA NA NA chr14 - 55407570 55407591 3'utr WDHD1 Ensembl G5398.1 TCTTAATATTATCTTTCCACG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr14:55407570-55407591 minimal NA NA NA UAUU minimal chr14 - 55408107 55408134 3'utr WDHD1 Ensembl G5399.1 AAACTCATTATATATATATTTTTTAAA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr14:55408107-55408134 minimal NA NA NA UAUU minimal chr1 + 160328673 160328695 3'utr NCSTN Ensembl G540.1 TCTTTTTCCTTTATTCTTTTTG 4 3 3 60 0.75 0.477121255 1 0 0 4 1 0 3 chr1:160328673-160328695 minimal NA NA NA UAUU minimal chr14 - 58865400 58865421 NoAnnotation G5409.1 ATTATATTATAATTAAAATAT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr14:58865400-58865421 minimal NA NA NA UAUU minimal chr14 - 59929494 59929517 3'utr GPR135 Ensembl G5410.1 CCACTTTATTTAAATTTTTATTA 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr14:59929494-59929517 minimal NA NA AUUUA UAUU minimal chr14 - 61111770 61111796 3'utr SIX1 Ensembl G5415.1 TATTTATTAACTTCTATTATTTAGAT 7 4 7 93 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr14:61111770-61111796 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 61112595 61112625 3'utr SIX1 Ensembl G5417.1 ATTTTCATTATTTCCTTTTAATTTATATAT 6 5 5 91 0.833333333 0.698970004 0 0 0 6 1 0 5 chr14:61112595-61112625 minimal NA NA AUUUA UAUU minimal chr14 - 61176634 61176662 3'utr SIX4 Ensembl G5419.1 TAATTTACCACCATACATTTTATTAATC 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:61176634-61176662 minimal NA NA AUUUA UAUU minimal chr1 + 161201759 161201788 NoAnnotation G542.1 CACCTTATTATTATTCTTATTAATTAATT 7 4 6 86 0.857142857 0.77815125 0 0.2 0.428571429 4 1 0 6 chr1:161201759-161201788 minimal NA NA NA UAUU minimal chr14 - 61178990 61179011 3'utr SIX4 Ensembl G5420.1 TTTCACTAAATAATATATATG 3 2 2 25 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:61178990-61179011 NA NA NA NA NA NA chr14 - 61441748 61441770 3'utr TRMT5 Ensembl G5424.1 TATTATTTAATAAAATTTTAGG 10 3 10 96 1 1 0 0.333333333 0.6 4 0 0 10 chr14:61441748-61441770 minimal NA NA AUUUA UAUU minimal chr14 - 63838675 63838706 3'utr PPP2R5E Ensembl G5426.1 TATCAATGGGGAATTTTCAAATATAAATATT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr14:63838675-63838706 NA NA NA NA UAUU minimal chr14 - 64151544 64151573 3'utr SGPP1 Ensembl G5427.1 ATCCTATTATTTTTTCAACTTTCTATTAT 10 2 9 130 0.9 0.954242509 0 0.5 0.7 3 1 0 9 chr14:64151544-64151573 minimal NA NA NA UAUU minimal chr14 - 64152536 64152560 3'utr SGPP1 Ensembl G5431.1 ATTCAACTTATATATAATATATAT 5 3 4 46 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr14:64152536-64152560 minimal NA NA NA NA NA chr14 - 69254779 69254827 3'utr ZFP36L1 Ensembl G5448.1 CAAAAAACTGTTGGATTATTTATTTTAGAAATTCCCCCCTTTGTGTTG 6 4 6 56 1 0.77815125 0 0.25 0.5 3 0 0 6 chr14:69254779-69254827 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 69254898 69254920 3'utr ZFP36L1 Ensembl G5449.1 TTTAATATATTATTCTTCAACG 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr14:69254898-69254920 minimal NA NA NA UAUU minimal chr1 + 161847896 161847921 intron ATF6 Ensembl G545.1 CTCATACACATTTATTTATTTATTT 3 2 3 39 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr1:161847896-161847921 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 69254951 69254976 3'utr ZFP36L1 Ensembl G5450.1 ATCTTCATATTAATCTTAAAATTTT 4 4 4 42 1 0.602059991 0 0 0 4 0 0 4 chr14:69254951-69254976 NA NA NA NA UAUU minimal chr14 - 69255063 69255109 3'utr ZFP36L1 Ensembl G5451.1 CACATCAATATAAAAAAGCTTATTTAACTTATCAAAACGTATTTAT 5 3 5 43 1 0.698970004 0 0 0 5 0 0 5 chr14:69255063-69255109 minimal NA NA AUUUA UAUU minimal chr14 - 69255264 69255287 3'utr ZFP36L1 Ensembl G5452.1 TATTCATTCCACATACAATATCT 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr14:69255264-69255287 NA NA NA NA UAUU minimal chr14 - 69518493 69518522 3'utr DCAF5 Ensembl G5453.1 TCCTTTATTTTATTCTATTCTATTTATTT 3 2 3 53 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:69518493-69518522 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 69775727 69775750 NoAnnotation G5454.1 TATCTGGTTGATTCTGCCAGTAA 37 2 36 294 0.198895028 -0.605065501 0 0.454545455 0.966850829 6 1 144 36 chr14:69775727-69775750 NA NA NA NA NA NA chr14 - 70792971 70792993 3'utr COX16 Ensembl G5456.1 ACTTCCTAATATATACTTCTAT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:70792971-70792993 NA NA NA NA NA NA chr14 - 70833618 70833641 NoAnnotation G5457.1 AATCCTATTTTAATCTTTTATCT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr14:70833618-70833641 minimal NA NA NA UAUU minimal chr14 - 70836598 70836618 NoAnnotation G5459.1 TTCCTACTACCTAAATTATT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:70836598-70836618 minimal NA NA NA UAUU minimal chr14 - 71024277 71024298 NoAnnotation G5461.1 TAATACTTCTATTTCCTATTT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr14:71024277-71024298 NA NA NA NA UAUU minimal chr14 - 71048449 71048473 NoAnnotation G5462.1 CTTTTATAAATATTCTATTTTTAT 4 3 4 53 1 0.602059991 0 0 0 4 0 0 4 chr14:71048449-71048473 minimal NA NA NA UAUU minimal chr14 - 71050335 71050355 3'utr MED6 Ensembl G5463.1 TTTACATTATTTTATATAAG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr14:71050335-71050355 minimal NA NA NA UAUU minimal chr14 - 73129142 73129169 3'utr DPF3 Ensembl G5466.1 TTAACTATTTTATTTATTTCAATATTT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr14:73129142-73129169 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 74184381 74184447 3'utr C14orf43 Ensembl G5472.1 CTATTTATTTATTCTTAGTATTTAATTTTTAACATCCTCTCAGGGACCAGGGGCCTCCTGCTTTTC 9 7 8 98 1 0.954242509 0 0 0 9 0 0 9 chr14:74184381-74184447 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 76117754 76117778 3'utr C14orf1 Ensembl G5481.1 CCTCTTTTTTTAATTTTTAAAATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:76117754-76117778 NA NA NA NA NA NA chr14 - 77806733 77806765 3'utr TMED8 Ensembl G5485.1 AATAATTAGATTTATTTATTACTGTATTTATT 15 2 15 154 1 1.176091259 0 0.666666667 0.933333333 1 0 0 15 chr14:77806733-77806765 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 78132646 78132670 repeat LINE-L2a RepeatMasker G5486.1 ATATAACATTCTACATAATTTACT 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:78132646-78132670 minimal NA NA AUUUA NA minimal chr1 + 162492436 162492459 3'utr UHMK1 Ensembl G549.1 TACTTTATACATTTATTTAATCC 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr1:162492436-162492459 minimal NA NA AUUUA UAUU minimal chr14 - 81258716 81258745 intron CEP128 Ensembl G5496.1 CATTTATTTTAAAATCTCATTTATTTATA 3 2 3 41 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:81258716-81258745 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 162493871 162493903 repeat Low_complexity-AT_rich RepeatMasker G550.1 TTATTAATTTTTTTATTTATTTATTTTTTCCT 6 3 6 108 1 0.77815125 0 0.25 0.5 3 0 0 6 chr1:162493871-162493903 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr14 - 81732029 81732057 intron STON2 Ensembl G5500.1 CAAACAAATTATTATTATTATTATTATT 3 2 2 36 0.666666667 0.301029996 0 0 0 3 1 0 2 chr14:81732029-81732057 minimal NA NA NA UAUU minimal chr14 - 81842334 81842354 intron STON2 Ensembl G5501.1 ATATTTCCTAATATTTATTG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:81842334-81842354 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr14 - 81941284 81941307 3'utr SEL1L Ensembl G5502.1 ATTTTTATATCTAACTTTCCTTC 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr14:81941284-81941307 minimal NA NA NA NA NA chr14 - 90341394 90341424 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G5513.1 CAATAACAGGTCTGTGATGCCCTTAGATGT 358 8 61 2487 0.150617284 0.104088598 0.017283951 0.365217391 0.819753086 73 297 47 61 chr14:90341394-90341424 NA NA NA NA NA NA chr14 - 90394967 90394991 repeat DNA-Charlie7 RepeatMasker G5514.1 ATATCAGGAAAGATGGACTTTACT 3 2 3 16 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:90394967-90394991 NA NA NA NA NA NA chr14 - 92529102 92529123 3'utr ATXN3 Ensembl G5525.1 AAAAAATATCTTTTATTTATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr14:92529102-92529123 UUAUUUAU NA NA AUUUA UAUU minimal chr14 - 93649298 93649324 3'utr MOAP1 Ensembl G5526.1 CCATTTACCTATTTAAATTCATCCTT 5 4 5 37 1 0.698970004 0 0.25 0.4 3 0 0 5 chr14:93649298-93649324 minimal NA NA AUUUA UAUU minimal chr14 - 93704072 93704100 3'utr BTBD7 Ensembl G5527.1 AAATATATAGTATTTTTATTTAGGTACC 4 3 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr14:93704072-93704100 minimal NA NA AUUUA UAUU minimal chr14 - 95234594 95234621 3'utr GSC Ensembl G5530.1 CCCCCACCGTAGTATTTATAGTTAAAT 10 3 10 63 1 1 0 0.5 0.7 3 0 0 10 chr14:95234594-95234621 minimal NA NA AUUUA UAUU minimal chr14 - 95555354 95555380 3'utr DICER1 Ensembl G5532.1 TAACTATAATACCTCTTAATTTACCT 5 3 5 45 1 0.698970004 0 0 0 5 0 0 5 chr14:95555354-95555380 minimal NA NA AUUUA NA minimal chr14 - 97885385 97885409 NoAnnotation G5537.1 TTTATTTTTTATTTTTTCTATTTT 3 2 3 52 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:97885385-97885409 minimal NA NA NA UAUU minimal chr14 - 103399898 103399920 3'utr CDC42BPB Ensembl G5546.1 ACAAATCTTTATTATAATATTG 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr14:103399898-103399920 minimal NA NA NA UAUU minimal chr1 + 162495706 162495727 3'utr UHMK1 Ensembl G555.1 AAAATCTCCAAATACTTATTT 6 3 4 44 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr1:162495706-162495727 minimal NA NA NA UAUU minimal chr14 - 105235752 105235777 3'utr AKT1 Ensembl G5551.1 TTTTTTTACAACATTCAACTTTAGT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr14:105235752-105235777 NA NA NA NA NA NA chr1 + 162496450 162496473 3'utr UHMK1 Ensembl G556.1 TTTTATTTTTCATATATATATTC 6 3 4 86 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:162496450-162496473 minimal NA NA NA UAUU minimal chr15 + 30941182 30941206 intron CHRNA7 Ensembl G5563.1 AAATATTTATTTAAACACTTTTAT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr15:30941182-30941206 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 + 31074359 31074383 intron CHRNA7 Ensembl G5564.1 ATTACTCTTTTTATTTTATTTATG 4 3 4 60 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr15:31074359-31074383 UUAUUUAU NA NA AUUUA UAUU minimal chr15 + 32930821 32930845 3'utr ARHGAP11A Ensembl G5568.1 CATCCTAAAACTCTATTTTTATTT 21 5 17 211 0.739130435 0.753327667 0.043478261 0.235294118 0.434782609 13 4 2 17 chr15:32930821-32930845 minimal NA NA NA UAUU minimal chr1 + 162496539 162496562 3'utr UHMK1 Ensembl G557.1 ATTTTATTCCAATATTATATATG 6 5 6 66 1 0.77815125 0.833333333 0 0 6 0 0 6 chr1:162496539-162496562 minimal NA NA NA UAUU minimal chr15 + 34399308 34399331 repeat Low_complexity-AT_rich RepeatMasker G5570.1 TTTAATATAAAATACACTAATAT 4 3 4 30 0.8 0.301029996 0 0 0 5 0 1 4 chr15:34399308-34399331 NA NA NA NA NA NA chr15 + 34522065 34522088 3'utr TMEM85 Ensembl G5571.1 CATACTCTTAAACTAATCACTTA 5 3 5 32 0.833333333 0.397940009 0 0.2 0.333333333 4 0 1 5 chr15:34522065-34522088 NA NA NA NA NA NA chr15 + 38644536 38644558 3'utr SPRED1 Ensembl G5575.1 ATATTTTCATCCTTATTTCTCT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr15:38644536-38644558 minimal NA NA NA UAUU minimal chr1 + 162497035 162497063 3'utr UHMK1 Ensembl G558.1 TTTTTCACTATTTTTAAATTATATAATG 3 3 3 39 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:162497035-162497063 minimal NA NA NA UAUU minimal chr15 + 41672414 41672435 3'utr NUSAP1 Ensembl G5586.1 TATTCTCAACTTTTTTCCTTT 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr15:41672414-41672435 NA NA NA NA UAUU minimal chr15 + 42060111 42060133 3'utr MGA Ensembl G5589.1 CTTTTAACTTTTATTATTAATT 6 4 5 79 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr15:42060111-42060133 minimal NA NA NA UAUU minimal chr15 + 42060794 42060818 3'utr MGA Ensembl G5590.1 CCTTTCTTAAATAATTATATTTTG 9 2 9 103 1 0.954242509 0.111111111 0.4 0.666666667 3 0 0 9 chr15:42060794-42060818 minimal NA NA NA UAUU minimal chr15 + 42824696 42824717 3'utr SNAP23 Ensembl G5593.1 CTTTTTATTTCATATTATTAG 3 2 3 36 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr15:42824696-42824717 minimal NA NA NA UAUU minimal chr15 + 42862065 42862087 3'utr HAUS2 Ensembl G5595.1 TTATTTCCTATATTCATTTTTG 3 2 2 40 1 0.477121255 1 0 0 3 0 0 3 chr15:42862065-42862087 minimal NA NA NA UAUU minimal chr15 + 44811756 44811779 intron CTDSPL2 Ensembl G5598.1 TTATTAAATCAGTAATTAGTAAT 3 2 2 18 1 0.477121255 0.333333333 0 0 3 0 0 3 chr15:44811756-44811779 minimal NA NA NA UAUU minimal chr1 + 162497836 162497876 3'utr UHMK1 Ensembl G560.1 CTTTCCCCTTCTAAGTTATCTTCCCTTAATAATATTTATG 49 11 43 533 0.843137255 1.156347201 0.392156863 0.305555556 0.509803922 25 6 2 43 chr1:162497836-162497876 minimal NA NA AUUUA UAUU minimal chr15 + 44818295 44818321 3'utr CTDSPL2 Ensembl G5600.1 TATTTATCTTTAGGGCATCTGGGCAT 3 2 3 23 1 0.477121255 0 0 0 3 0 0 3 chr15:44818295-44818321 minimal NA NA AUUUA UAUU minimal chr15 + 44819880 44819902 3'utr CTDSPL2 Ensembl G5602.1 TATCTAAATTAACTTAGTTAAT 5 2 5 44 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr15:44819880-44819902 NA NA NA NA NA NA chr15 + 44820911 44820937 repeat Low_complexity-AT_rich RepeatMasker G5603.1 TAAAATATTTCACTATTTTTTTATTT 3 2 3 43 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:44820911-44820937 minimal NA NA NA UAUU minimal chr15 + 45009873 45009893 3'utr B2M Ensembl G5604.1 CTTATACACTTACACTTTAT 4 3 4 32 1 0.602059991 0.5 0 0 4 0 0 4 chr15:45009873-45009893 minimal NA NA NA NA NA chr15 + 45010245 45010265 3'utr B2M Ensembl G5606.1 ATTCATATTTACTTCTTATA 8 2 8 80 1 0.903089987 0 0.666666667 0.875 1 0 0 8 chr15:45010245-45010265 minimal NA NA AUUUA UAUU minimal chr15 + 45898921 45898943 repeat Low_complexity-AT_rich RepeatMasker G5609.1 CTTAATTTTAAAATTTATTATT 6 3 5 73 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr15:45898921-45898943 minimal NA NA AUUUA UAUU minimal chr15 + 49927102 49927134 intron DTWD1 Ensembl G5617.1 CCATATTTACTTTATTTCTCTCTTTTTATTAT 14 6 12 187 0.857142857 1.079181246 0 0.166666667 0.285714286 10 2 0 12 chr15:49927102-49927134 minimal NA NA AUUUA UAUU minimal chr15 + 49935808 49935831 3'utr DTWD1 Ensembl G5618.1 CTAACATTAATAAACTTATATTT 6 3 6 46 1 0.77815125 0.166666667 0.2 0.333333333 4 0 0 6 chr15:49935808-49935831 minimal NA NA NA UAUU minimal chr1 + 162498258 162498284 repeat Low_complexity-AT_rich RepeatMasker G562.1 CCTAATTTTTAAAAATAAATATTTAT 4 2 3 41 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr1:162498258-162498284 minimal NA NA AUUUA UAUU minimal chr15 + 50712947 50712969 repeat Low_complexity-AT_rich RepeatMasker G5623.1 TTTTAAATCTTAATTATTTTTT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr15:50712947-50712969 minimal NA NA NA UAUU minimal chr15 + 50761361 50761388 repeat DNA-MER113 RepeatMasker G5624.1 CAATTTACTTAAATATTTTATTTATCT 3 2 3 40 1 0.477121255 0 0 0 3 0 0 3 chr15:50761361-50761388 UUAUUUAU NA NA AUUUA UAUU minimal chr15 + 52202081 52202104 3'utr TMOD3 Ensembl G5625.1 CTATTCTTCATAAATCTAATTTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr15:52202081-52202104 NA NA NA NA UAUU minimal chr15 + 52202113 52202137 3'utr TMOD3 Ensembl G5626.1 CTTCCTTTCATCTTATACTTTTAT 4 3 4 51 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr15:52202113-52202137 minimal NA NA NA NA NA chr15 + 52203465 52203490 3'utr TMOD3 Ensembl G5627.1 AATATCTTTTTCATATATTATTTAT 7 4 7 92 0.875 0.544068044 0 0.6 0.75 2 0 1 7 chr15:52203465-52203490 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 162499188 162499217 3'utr UHMK1 Ensembl G563.1 AACTTTTATTTTCCACTTTCCTATATTCC 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr1:162499188-162499217 minimal NA NA NA UAUU minimal chr15 + 57215094 57215117 repeat Low_complexity-AT_rich RepeatMasker G5632.1 TAACATTATTTTACTTATATATT 5 3 4 57 0.8 0.602059991 0 0 0 5 1 0 4 chr15:57215094-57215117 minimal NA NA NA UAUU minimal chr15 + 57578695 57578717 3'utr TCF12 Ensembl G5636.1 TAACTACAAATTTTATTTATTG 33 6 26 323 0.787878788 1.414973348 0.818181818 0.4375 0.727272727 9 7 0 26 chr15:57578695-57578717 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 57580346 57580376 3'utr TCF12 Ensembl G5637.1 TTTCTTACTTTATTTTATTATATTAGGTAG 10 4 8 159 0.8 0.903089987 0.5 0.125 0.3 7 2 0 8 chr15:57580346-57580376 minimal NA NA NA UAUU minimal chr15 + 58008383 58008410 3'utr GRINL1A Ensembl G5638.1 TACATTGCTTTGTAGTCTGCTCTATAT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr15:58008383-58008410 NA NA NA NA NA NA chr15 + 60299061 60299107 NoAnnotation G5641.1 TTAACTTTCCGATGACTTAGAGACCTTTTTAGCTATTTATTTTATT 46 2 45 535 0.957446809 1.352182518 0.340425532 0.3 0.85106383 7 1 1 45 chr15:60299061-60299107 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 + 60299604 60299628 NoAnnotation G5642.1 TCCAAATAATATTTTCTCATTAAA 10 6 9 89 0.9 0.954242509 0 0 0 10 1 0 9 chr15:60299604-60299628 NA NA NA NA UAUU minimal chr15 + 63358302 63358328 intron TPM1 Ensembl G5644.1 CTATTCTTTTTACTTCTTATTTATTG 7 6 7 106 1 0.84509804 0.142857143 0.166666667 0.285714286 5 0 0 7 chr15:63358302-63358328 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 64429962 64430009 3'utr SNX1 Ensembl G5647.1 TACTCTAACCGTTATTTCATTTAGCTTCCATATATATTTTCTTACCT 8 4 7 88 0.777777778 0.544068044 0.222222222 0.125 0.222222222 7 1 1 7 chr15:64429962-64430009 minimal NA NA AUUUA UAUU minimal chr15 + 64680482 64680506 repeat Low_complexity-AT_rich RepeatMasker G5648.1 AACCCCTTACTCTTTTATTTATTT 5 2 5 54 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr15:64680482-64680506 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 66180269 66180289 3'utr RAB11A Ensembl G5656.1 TTTTATTACTTCATACTTAT 3 3 3 33 0.75 0.176091259 0.75 0 0 4 0 1 3 chr15:66180269-66180289 minimal NA NA NA UAUU minimal chr15 + 66181696 66181719 3'utr RAB11A Ensembl G5657.1 CTACTTTGTATTTTATGCATGCT 4 2 4 44 1 0.602059991 0 0.5 0.75 1 0 0 4 chr15:66181696-66181719 minimal NA NA NA UAUU minimal chr15 + 66783816 66783853 3'utr MAP2K1 Ensembl G5662.1 TTTAACAAATCTAATCTCTTATTCTAATAAATATACT 28 9 27 292 0.964285714 1.431363764 0.035714286 0.444444444 0.642857143 10 1 0 27 chr15:66783816-66783853 minimal NA NA NA UAUU minimal chr15 + 67818756 67818776 coding C15orf61 Ensembl G5664.1 TATTCCAACTTTATTATATG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr15:67818756-67818776 minimal NA NA NA UAUU minimal chr15 + 68380443 68380466 intron PIAS1 Ensembl G5665.1 TATAACTTCCCTTTTTTCCCCTT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr15:68380443-68380466 NA NA NA NA NA NA chr15 + 68383879 68383910 repeat Low_complexity-AT_rich RepeatMasker G5666.1 CTTTTAAATATTTTTAATATTTTTAATTATT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr15:68383879-68383910 minimal NA NA NA UAUU minimal chr15 + 68582509 68582531 coding FEM1B Ensembl G5670.1 ACATACCACTATCTATATTTAG 4 2 4 28 1 0.602059991 0.5 1 1 0 0 0 4 chr15:68582509-68582531 minimal NA NA AUUUA UAUU minimal chr15 + 68584061 68584085 3'utr FEM1B Ensembl G5672.1 TTTACACTCTTCCATTATTTATAC 22 6 21 233 0.875 0.84509804 0.041666667 0.352941176 0.541666667 11 1 2 21 chr15:68584061-68584085 UUAUUUAU NA NA AUUUA UAUU minimal chr15 + 68584172 68584195 repeat Low_complexity-AT_rich RepeatMasker G5673.1 TTACAAATTTATAAATTTAAATC 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chr15:68584172-68584195 minimal NA NA AUUUA NA minimal chr15 + 68585046 68585069 3'utr FEM1B Ensembl G5675.1 TTTCAATTAACATTTTATATATG 9 5 8 92 0.888888889 0.903089987 0.444444444 0.125 0.222222222 7 1 0 8 chr15:68585046-68585069 minimal NA NA NA NA NA chr15 + 68585641 68585661 repeat Low_complexity-AT_rich RepeatMasker G5676.1 TATATTATTTTTATTTAAAC 6 2 3 55 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr15:68585641-68585661 minimal NA NA AUUUA UAUU minimal chr1 + 163303298 163303320 intron NUF2 Ensembl G568.1 TCTATTAAAATAAATTTTATTT 3 2 2 29 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:163303298-163303320 minimal NA NA NA UAUU minimal chr15 + 72432895 72432915 3'utr SENP8 Ensembl G5685.1 TATATAATTAATTTCCTTTG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr15:72432895-72432915 NA NA NA NA NA NA chr15 + 72797621 72797645 intron ARIH1 Ensembl G5687.1 TAATATTTTACATTTCTATTTATT 4 3 4 54 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr15:72797621-72797645 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 + 72851301 72851326 intron ARIH1 Ensembl G5688.1 ATACATTCCTTATTATTATTTATTG 2 2 2 25 1 0.301029996 1 0 0 2 0 0 2 chr15:72851301-72851326 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 72889072 72889094 NoAnnotation G5693.1 AATTCTCCATTTAAAAATTTTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr15:72889072-72889094 minimal NA NA AUUUA NA minimal chr15 + 72889128 72889150 NoAnnotation G5694.1 AATTATTCATTTCTAATATTTT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr15:72889128-72889150 minimal NA NA NA UAUU minimal chr15 + 72894253 72894275 NoAnnotation G5696.1 TATATAATATTCCTCTTTATTT 4 2 3 47 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr15:72894253-72894275 minimal NA NA NA UAUU minimal chr15 + 72917590 72917615 NoAnnotation G5697.1 CATACAATCAACATTATTTTTATTT 6 3 6 66 1 0.77815125 0 0.25 0.5 3 0 0 6 chr15:72917590-72917615 minimal NA NA NA UAUU minimal chr15 + 74754745 74754766 lincRNA AC012435.1 Ensembl G5700.1 CTCCATAATTTATCAAAATTA 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:74754745-74754766 minimal NA NA AUUUA NA minimal chr15 + 75095176 75095199 3'utr CSK Ensembl G5701.1 TTTATTTTTTATTATTTTTCAAG 3 2 2 46 0.666666667 0.301029996 1 0 0 3 1 0 2 chr15:75095176-75095199 minimal NA NA NA UAUU minimal chr15 + 77769836 77769856 intron HMG20A Ensembl G5707.1 CACTATTATTTAATTTATCT 7 2 7 70 1 0.84509804 0 0.333333333 0.714285714 2 0 0 7 chr15:77769836-77769856 minimal NA NA AUUUA UAUU minimal chr15 + 78791290 78791313 3'utr IREB2 Ensembl G5712.1 TAACTTCCTATAACCTAATATTT 8 2 2 72 0.5 0.602059991 0.25 0.333333333 0.5 4 4 0 4 chr15:78791290-78791313 NA NA NA NA UAUU minimal chr15 + 78791980 78792000 3'utr IREB2 Ensembl G5714.1 ATTTCTTTATTTAAATTTTG 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr15:78791980-78792000 minimal NA NA AUUUA UAUU minimal chr15 + 80365705 80365730 intron ZFAND6 Ensembl G5718.1 ATTCTATTTACATTTCTTATTTATG 6 5 6 82 0.857142857 0.477121255 0.714285714 0 0 7 0 1 6 chr15:80365705-80365730 UUAUUUAU NA NA AUUUA UAUU minimal chr15 + 80371219 80371244 intron ZFAND6 Ensembl G5719.1 CTCAATTATTTTATTTTATTATTAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr15:80371219-80371244 minimal NA NA NA UAUU minimal chr1 + 164855141 164855163 repeat LINE-L2a RepeatMasker G572.1 CACTCAATTATCTTATTTATTG 12 5 12 120 1 1.079181246 0.666666667 0.333333333 0.5 6 0 0 12 chr1:164855141-164855163 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 85348731 85348753 3'utr ZNF592 Ensembl G5730.1 ACAAATTACTTAGTATTTATTT 6 2 6 57 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr15:85348731-85348753 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 + 85348816 85348836 3'utr ZNF592 Ensembl G5731.1 AACTTTCCCCTTAACTTATG 5 3 3 37 0.6 0.477121255 1 0.25 0.4 3 2 0 3 chr15:85348816-85348836 minimal NA NA NA NA NA chr15 + 87663864 87663885 NoAnnotation G5737.1 ATTTAACTGTGATAAACAAGA 8 2 2 46 0.133333333 -0.602059991 0 0.571428571 0.8 3 6 7 2 chr15:87663864-87663885 minimal NA NA AUUUA NA minimal chr15 + 89174418 89174439 3'utr AEN Ensembl G5741.1 ACCTTTATTTATTTATTAACA 10 7 10 100 1 1 0.2 0.111111111 0.2 8 0 0 10 chr15:89174418-89174439 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 90819183 90819205 3'utr AC091167.2 Ensembl G5756.1 CCAATATTTCCTTATATCTACC 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr15:90819183-90819205 minimal NA NA NA UAUU minimal chr15 + 91464145 91464165 repeat LINE-L1M5 RepeatMasker G5760.1 ATTTAAAATCCATCCCTTAT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr15:91464145-91464165 minimal NA NA AUUUA NA minimal chr15 + 91503138 91503159 coding RCCD1 Ensembl G5761.1 ATATTTATATCTGGGGCTGGA 3 3 3 21 1 0.477121255 0 0 0 3 0 0 3 chr15:91503138-91503159 minimal NA NA AUUUA UAUU minimal chr15 + 93443973 93443993 5'utr CHD2 Ensembl G5764.1 CCTTTATTTTTAATTATTTG 9 4 8 109 0.888888889 0.903089987 1 0.2 0.555555556 4 1 0 8 chr15:93443973-93443993 minimal NA NA NA UAUU minimal chr15 + 98515186 98515210 3'utr ARRDC4 Ensembl G5772.1 ATTTTCCTCATATCTTATTTACCT 10 7 8 114 0.8 0.903089987 0 0.25 0.4 6 2 0 8 chr15:98515186-98515210 minimal NA NA AUUUA UAUU minimal chr15 + 98516949 98516970 3'utr ARRDC4 Ensembl G5774.1 CTTTCTTATTTTTATTATTAA 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:98516949-98516970 minimal NA NA NA UAUU minimal chr15 + 100110217 100110241 repeat Low_complexity-AT_rich RepeatMasker G5777.1 CTTTATACTTTAATAATATTTATA 6 3 4 72 0.666666667 0.602059991 0 0 0 6 2 0 4 chr15:100110217-100110241 minimal NA NA AUUUA UAUU minimal chr15 + 100254266 100254286 3'utr MEF2A Ensembl G5780.1 TATAAAGGGGTTTCTCCCCT 3 3 3 18 1 0.477121255 0 0 0 3 0 0 3 chr15:100254266-100254286 NA NA NA NA NA NA chr15 + 101170252 101170272 coding ASB7 Ensembl G5782.1 TAATATAATTATTACTTTAT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr15:101170252-101170272 minimal NA NA NA UAUU minimal chr15 + 101190953 101190973 3'utr ASB7 Ensembl G5785.1 TATAATTCCATTATTTATTG 7 5 7 70 1 0.84509804 1 0.4 0.571428571 3 0 0 7 chr15:101190953-101190973 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 + 101191464 101191484 3'utr ASB7 Ensembl G5786.1 ATTATTTAATTCCCATATTT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr15:101191464-101191484 minimal NA NA AUUUA UAUU minimal chr15 - 23043287 23043310 3'utr NIPA1 Ensembl G5788.1 TTTTAAAATAAAATAACTTATTT 8 4 8 73 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr15:23043287-23043310 minimal NA NA NA UAUU minimal chr15 - 23043438 23043458 3'utr NIPA1 Ensembl G5789.1 CTTCCAATTAGCATACATAG 3 2 3 15 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:23043438-23043458 NA NA NA NA NA NA chr15 - 23048528 23048554 3'utr NIPA1 Ensembl G5791.1 AATATTCTCTTCTTTTAAAACATTTT 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr15:23048528-23048554 NA NA NA NA UAUU minimal chr15 - 25582624 25582646 3'utr UBE3A Ensembl G5794.1 CACTTTTCACCATAATTTAATT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr15:25582624-25582646 minimal NA NA AUUUA NA minimal chr15 - 25583311 25583333 3'utr UBE3A Ensembl G5795.1 TTTTATTAATTACTTACTTATT 4 3 4 52 1 0.602059991 0 0 0 4 0 0 4 chr15:25583311-25583333 minimal NA NA NA UAUU minimal chr15 - 25584035 25584065 3'utr UBE3A Ensembl G5796.1 AACAAATCCTTTATTATTATTATAATTATT 7 5 6 81 0.857142857 0.77815125 0 0 0 7 1 0 6 chr15:25584035-25584065 minimal NA NA NA UAUU minimal chr15 - 28373040 28373067 intron HERC2 Ensembl G5801.1 AATCTATTTAAATATTCCTTTCTCATG 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:28373040-28373067 minimal NA NA AUUUA UAUU minimal chr15 - 29560529 29560557 3'utr NDNL2 Ensembl G5802.1 TTAACCTATTTTATTTTTCTATATTTCG 3 2 2 49 0.666666667 0.301029996 0 0 0 3 1 0 2 chr15:29560529-29560557 minimal NA NA NA UAUU minimal chr15 - 34633953 34633980 3'utr NOP10 Ensembl G5807.1 ACTTTTTTTTCTCATATTTTAAATTAC 7 5 5 83 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr15:34633953-34633980 NA NA NA NA UAUU minimal chr15 - 35271339 35271363 3'utr ZNF770 Ensembl G5810.1 ATACTACTATACTTTATTTTTGAC 10 5 7 110 0.7 0.84509804 0 0.428571429 0.6 4 3 0 7 chr15:35271339-35271363 minimal NA NA NA UAUU minimal chr15 - 35272592 35272613 3'utr ZNF770 Ensembl G5813.1 CTATCTTTCTCAAAATAATTT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr15:35272592-35272613 NA NA NA NA NA NA chr1 + 166822524 166822552 3'utr POGK Ensembl G582.1 ACTTTTTTAGGGTCTCATTTAATGGCCC 7 4 5 71 0.714285714 0.698970004 0.285714286 0.166666667 0.285714286 5 2 0 5 chr1:166822524-166822552 minimal NA NA AUUUA NA minimal chr15 - 40325771 40325793 NoAnnotation G5821.1 TCACTATTAATCTAATTTAATT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr15:40325771-40325793 minimal NA NA AUUUA UAUU minimal chr15 - 43031277 43031300 NoAnnotation G5827.1 TAATTATTTATTTAATTTTCCCA 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr15:43031277-43031300 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 - 43037265 43037292 3'utr TTBK2 Ensembl G5829.1 TTCTTAACATATTACATTTTTATTATG 4 3 3 50 0.75 0.477121255 0 0 0 4 1 0 3 chr15:43037265-43037292 minimal NA NA NA UAUU minimal chr1 + 166822554 166822578 3'utr POGK Ensembl G583.1 TTTTTTTCATTATTATATTTAATG 6 3 4 86 0.666666667 0.602059991 0.666666667 0 0 6 2 0 4 chr1:166822554-166822578 minimal NA NA AUUUA UAUU minimal chr15 - 43081935 43081959 repeat LINE-L1MA8 RepeatMasker G5830.1 CTTTTTATTTTTCTATATTTATTT 10 3 6 167 0.6 0.77815125 0 0.333333333 0.6 4 4 0 6 chr15:43081935-43081959 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 43162017 43162042 intron TTBK2 Ensembl G5832.1 CTACTTATAAACTAAATTATCTATT 3 3 3 25 1 0.477121255 0 0 0 3 0 0 3 chr15:43162017-43162042 minimal NA NA NA UAUU minimal chr15 - 43650691 43650724 3'utr ZSCAN29 Ensembl G5836.1 ATCTTAGTACAAAAAAATCTAATATTTATTAGG 9 5 8 68 0.888888889 0.903089987 0 0 0 9 1 0 8 chr15:43650691-43650724 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 44280835 44280856 intron FRMD5 Ensembl G5839.1 CCTTAATACTTCTTTATTTTG 6 2 2 70 0.333333333 0.301029996 0 0.333333333 0.666666667 2 4 0 2 chr15:44280835-44280856 minimal NA NA NA UAUU minimal chr15 - 48432425 48432452 3'utr MYEF2 Ensembl G5843.1 CATAAATAACACTAATATTTATCATCT 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:48432425-48432452 minimal NA NA AUUUA UAUU minimal chr15 - 48434014 48434045 3'utr MYEF2 Ensembl G5844.1 TCTTAACATTTATTTAATAATTATATTTATT 4 3 4 53 1 0.602059991 0 0 0 4 0 0 4 chr15:48434014-48434045 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 48435380 48435405 intron MYEF2 Ensembl G5845.1 CTTATATTATTTATTTTAAATAATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr15:48435380-48435405 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 - 48448444 48448471 intron MYEF2 Ensembl G5847.1 CCTTATTATTTTTTCCTTCTATTTATT 4 4 4 66 1 0.602059991 0 0 0 4 0 0 4 chr15:48448444-48448471 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 48458742 48458766 intron MYEF2 Ensembl G5848.1 TTAAAAATAAAATTAATATTTATT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:48458742-48458766 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 49030192 49030218 3'utr CEP152 Ensembl G5850.1 TTTCTAAACCATCTATTTTTATACTT 4 2 3 44 0.75 0.477121255 0 0 0 4 1 0 3 chr15:49030192-49030218 minimal NA NA NA UAUU minimal chr15 - 49283242 49283269 3'utr SECISBP2L Ensembl G5854.1 TATTAATTCTCTATTCACTATTATTTA 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr15:49283242-49283269 minimal NA NA AUUUA UAUU minimal chr15 - 49417243 49417266 NoAnnotation G5859.1 AAAAACTCTTATTCTTAATATTT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr15:49417243-49417266 minimal NA NA NA UAUU minimal chr15 - 49417965 49417986 3'utr COPS2 Ensembl G5860.1 TTATACCATAATAATTTATTG 22 4 16 202 0.727272727 1.204119983 0 0.5 0.818181818 4 6 0 16 chr15:49417965-49417986 minimal NA NA AUUUA UAUU minimal chr15 - 52842694 52842718 3'utr ARPP19 Ensembl G5866.1 ATCCTTTATTATTACTAATATTCT 17 6 16 184 0.941176471 1.204119983 0 0.5 0.705882353 5 1 0 16 chr15:52842694-52842718 minimal NA NA NA UAUU minimal chr15 - 52842874 52842898 3'utr ARPP19 Ensembl G5867.1 TCTATATCCTTACTCTTTTATATA 5 3 5 57 1 0.698970004 0 0 0 5 0 0 5 chr15:52842874-52842898 minimal NA NA NA NA NA chr15 - 52843793 52843819 3'utr ARPP19 Ensembl G5868.1 CTTTCATTACTTCATCTTAATTATAG 6 4 5 73 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr15:52843793-52843819 minimal NA NA NA NA NA chr15 - 52844076 52844104 3'utr ARPP19 Ensembl G5869.1 CTAAATCTCATTATTTCTCCTTAATATG 27 7 24 289 0.857142857 1.079181246 0 0.388888889 0.607142857 11 3 1 24 chr15:52844076-52844104 minimal NA NA NA UAUU minimal chr15 - 55577586 55577607 intron RAB27A Ensembl G5873.1 ATACTCATATTTTATTTATTG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr15:55577586-55577607 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 - 55833086 55833111 3'utr PYGO1 Ensembl G5880.1 TTCATATTAAAACTATTTCTTCCTT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr15:55833086-55833111 NA NA NA NA UAUU minimal chr15 - 55836266 55836290 3'utr PYGO1 Ensembl G5881.1 TAAAATATTTATCTTTACAATTTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr15:55836266-55836290 minimal NA NA AUUUA UAUU minimal chr15 - 56380802 56380835 intron RFX7 Ensembl G5884.1 TATAAATTTATGGATGGGATCACTTATTAATAT 8 3 5 58 0.625 0.698970004 0.25 0.333333333 0.5 4 3 0 5 chr15:56380802-56380835 minimal NA NA AUUUA UAUU minimal chr15 - 58245890 58245917 3'utr ALDH1A2 Ensembl G5887.1 TTTTCTATTTATAACTCTTATCTATCC 16 7 10 222 0.555555556 0.522878745 0 0.214285714 0.388888889 11 6 2 10 chr15:58245890-58245917 minimal NA NA AUUUA UAUU minimal chr1 + 167392608 167392628 3'utr POU2F1 Ensembl G589.1 CTTTACTAATAATCTTATTG 6 2 6 54 1 0.77815125 1 1 1 0 0 0 6 chr1:167392608-167392628 minimal NA NA NA UAUU minimal chr15 - 59962806 59962829 intron BNIP2 Ensembl G5894.1 CTTTATATTTCTCCTTATTTAAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:59962806-59962829 minimal NA NA AUUUA UAUU minimal chr15 - 60782536 60782561 3'utr RORA Ensembl G5897.1 TTTTACTATATAATCTATTTTAGAC 6 2 6 69 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr15:60782536-60782561 NA NA NA NA UAUU minimal chr15 - 64458442 64458470 3'utr CSNK1G1 Ensembl G5911.1 CTCTAATTTATTATATTATTATTTATCT 33 10 31 464 0.939393939 1.491361694 0 0.409090909 0.606060606 13 2 0 31 chr15:64458442-64458470 UUAUUUAU NA NA AUUUA UAUU minimal chr15 - 65738912 65738939 3'utr DPP8 Ensembl G5916.1 TATTCATACTACCCTATTTTCACTTTT 28 7 26 268 0.928571429 1.414973348 0 0.571428571 0.785714286 6 2 0 26 chr15:65738912-65738939 NA NA NA NA UAUU minimal chr15 - 65890810 65890839 intron C15orf44 Ensembl G5920.1 TATTACTCTTCCTATAACTATTAATTATC 12 3 9 122 0.75 0.954242509 0 0.285714286 0.583333333 5 3 0 9 chr15:65890810-65890839 minimal NA NA NA UAUU minimal chr15 - 66624430 66624453 NoAnnotation G5926.1 CTTAAATATTTTAATAAATTATA 4 2 2 42 0.5 0.301029996 0 0 0 4 2 0 2 chr15:66624430-66624453 minimal NA NA NA UAUU minimal chr15 - 66784605 66784628 intron SNAPC5 Ensembl G5929.1 CCTTTTATTTATAAATATATATG 4 2 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr15:66784605-66784628 UUAUUUAU NA NA AUUUA UAUU minimal chr15 - 66795209 66795235 snoRNA SNORD16 Ensembl G5934.1 TAATTTGCGTCTTACTCTGTTCTCAG 21 2 2 219 0.086956522 -0.176091259 0 0.307692308 0.608695652 9 19 2 2 chr15:66795209-66795235 NA NA NA NA NA NA chr15 - 71124249 71124287 3'utr LARP6 Ensembl G5943.1 ATTTTTTATTCATGTAGACCTCTTAATTTATCTATCTG 10 6 10 92 0.909090909 0.698970004 0 0.222222222 0.363636364 7 0 1 10 chr15:71124249-71124287 minimal NA NA AUUUA UAUU minimal chr15 - 71174158 71174184 3'utr THAP10 Ensembl G5944.1 TTTTCATATACTTACATTAACTTATT 9 7 9 104 1 0.954242509 0 0 0 9 0 0 9 chr15:71174158-71174184 minimal NA NA NA UAUU minimal chr15 - 71174278 71174299 3'utr THAP10 Ensembl G5945.1 TTATTTATTTATTAGTTTGTC 2 2 2 19 1 0.301029996 0 0 0 2 0 0 2 chr15:71174278-71174299 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 168212592 168212618 NoAnnotation G595.1 CTATATTTTTTTCTCCATTATTTATA 9 5 9 131 0.818181818 0.477121255 0 0.111111111 0.272727273 8 0 2 9 chr1:168212592-168212618 UUAUUUAU NA NA AUUUA UAUU minimal chr15 - 73043755 73043783 3'utr ADPGK Ensembl G5953.1 TTATATATTTATTTTTTTATAAATCAAG 9 4 7 129 0.777777778 0.84509804 0 0.5 0.666666667 3 2 0 7 chr15:73043755-73043783 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr15 - 75877936 75877959 repeat SINE-MIR RepeatMasker G5959.1 TTCACCTTTCTTATACTATTATG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr15:75877936-75877959 minimal NA NA NA UAUU minimal chr15 - 75931677 75931701 3'utr IMP3 Ensembl G5960.1 CACTGGGGTATTGTTGGCTTCTTG 3 2 3 23 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr15:75931677-75931701 NA NA NA NA UAUU minimal chr15 - 79430836 79430856 NoAnnotation G5968.1 TACATCTTTTCTATTTATTG 5 4 4 56 0.666666667 0.301029996 0 0 0 6 1 1 4 chr15:79430836-79430856 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 168219141 168219170 NoAnnotation G597.1 ATCATTAATTTATTTAACAAATACTTATC 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr1:168219141-168219170 minimal NA NA AUUUA UAUU minimal chr15 - 81271112 81271135 3'utr MESDC2 Ensembl G5971.1 CCATATACATCATTTTCATTATG 5 3 4 46 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr15:81271112-81271135 minimal NA NA NA NA NA chr15 - 83663783 83663805 intron C15orf40 Ensembl G5980.1 TTTATTTCATTCTATAATAATT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr15:83663783-83663805 minimal NA NA NA UAUU minimal chr15 - 85184182 85184208 NoAnnotation G5986.1 CCCTTATCTATTTTCATAATAATTAT 9 6 6 96 0.666666667 0.77815125 0 0.125 0.222222222 7 3 0 6 chr15:85184182-85184208 minimal NA NA NA UAUU minimal chr15 - 89974570 89974593 repeat DNA-MER97c RepeatMasker G5991.1 ACTATTTCTTATTTTATTTATTT 5 3 3 74 0.6 0.477121255 0 0 0 5 2 0 3 chr15:89974570-89974593 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr15 - 91509303 91509331 3'utr PRC1 Ensembl G5994.1 TTTTTAAAATATACAATTATTCTTAAAA 10 5 8 100 0.8 0.903089987 0 0.285714286 0.5 5 2 0 8 chr15:91509303-91509331 minimal NA NA NA UAUU minimal chr15 - 91509438 91509461 3'utr PRC1 Ensembl G5995.1 CACTATTATTTATTCTTCCGCTG 11 5 10 101 0.909090909 1 0 0.5 0.727272727 3 1 0 10 chr15:91509438-91509461 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 169100891 169100911 3'utr ATP1B1 Ensembl G600.1 ACCTACACTTAATCTATATG 3 2 3 18 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr1:169100891-169100911 NA NA NA NA NA NA chr15 - 101716426 101716451 3'utr CHSY1 Ensembl G6004.1 AAATACCTTTAATTTATTTAATATC 10 5 6 106 0.6 0.77815125 0 0 0 10 4 0 6 chr15:101716426-101716451 minimal NA NA AUUUA UAUU minimal chr15 - 101717543 101717568 3'utr CHSY1 Ensembl G6006.1 TTTTTAATTATCTAATTTATTTTTC 8 6 7 110 0.875 0.84509804 0 0 0 8 1 0 7 chr15:101717543-101717568 minimal NA NA AUUUA UAUU minimal chr16 + 1727749 1727774 3'utr CRAMP1L Ensembl G6015.1 TACCATATTGTAAATTATATTATTT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr16:1727749-1727774 minimal NA NA NA UAUU minimal chr16 + 2228017 2228039 3'utr TRAF7 Ensembl G6018.1 AATCAATAATATTTCTTTCTTT 11 6 9 121 0.818181818 0.954242509 0 0.222222222 0.363636364 7 2 0 9 chr16:2228017-2228039 NA NA NA NA UAUU minimal chr16 + 2758898 2758920 3'utr KCTD5 Ensembl G6022.1 ACTTAATTCACTAAAATTTATT 4 2 4 36 1 0.602059991 0 1 1 0 0 0 4 chr16:2758898-2758920 minimal NA NA AUUUA UAUU minimal chr16 + 9212056 9212083 3'utr C16orf72 Ensembl G6034.1 TAATTTATTCTATCATATTATTATATT 24 9 20 295 0.833333333 1.301029996 0 0.222222222 0.416666667 14 4 0 20 chr16:9212056-9212083 minimal NA NA AUUUA UAUU minimal chr16 + 9212686 9212714 3'utr C16orf72 Ensembl G6036.1 ATGGAGGAACACATATTTAATTCCCCTT 6 2 6 39 1 0.77815125 0 0.25 0.5 3 0 0 6 chr16:9212686-9212714 minimal NA NA AUUUA UAUU minimal chr1 + 169357362 169357383 repeat Low_complexity-AT_rich RepeatMasker G604.1 AATAATCACAAAATATTTATA 3 2 3 18 1 0.477121255 0 0 0 3 0 0 3 chr1:169357362-169357383 minimal NA NA AUUUA UAUU minimal chr16 + 14043590 14043611 3'utr ERCC4 Ensembl G6042.1 TTTTTAAACTTTTATATTTAA 4 2 2 42 0.5 0.301029996 0 0 0 4 2 0 2 chr16:14043590-14043611 minimal NA NA AUUUA UAUU minimal chr16 + 14045802 14045824 3'utr ERCC4 Ensembl G6043.1 AATTATCACTTTTCTTTATTAT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr16:14045802-14045824 minimal NA NA NA UAUU minimal chr16 + 14046024 14046047 repeat Low_complexity-AT_rich RepeatMasker G6044.1 TTTAATAAAATATATATTTATTC 5 3 3 56 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr16:14046024-14046047 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 + 14762769 14762792 3'utr BFAR Ensembl G6046.1 CTCACACTATATAATCTTTATTG 8 3 8 66 1 0.903089987 0.5 0.142857143 0.25 6 0 0 8 chr16:14762769-14762792 minimal NA NA NA UAUU minimal chr16 + 14767192 14767218 repeat Low_complexity-AT_rich RepeatMasker G6047.1 CTTCATTTGGGGATTCCTTTATTTAA 4 2 4 38 1 0.602059991 0.5 1 1 0 0 0 4 chr16:14767192-14767218 minimal NA NA AUUUA UAUU minimal chr16 + 19089723 19089748 3'utr COQ7 Ensembl G6051.1 TTTGGTCTCATACTTAATTTTCTTT 3 2 3 37 1 0.477121255 0 0 0 3 0 0 3 chr16:19089723-19089748 NA NA NA NA NA NA chr16 + 19564587 19564610 3'utr CCP110 Ensembl G6055.1 ATTTTTATTTATATACTTTTTTT 6 2 2 96 0.333333333 0.301029996 0.166666667 0.333333333 0.666666667 2 4 0 2 chr16:19564587-19564610 UUAUUUAU NA NA AUUUA UAUU minimal chr16 + 24835319 24835339 3'utr TNRC6A Ensembl G6070.1 TATCTACTCTATTTACACTC 4 3 4 32 1 0.602059991 0 0 0 4 0 0 4 chr16:24835319-24835339 minimal NA NA AUUUA UAUU minimal chr16 + 30755825 30755848 NoAnnotation G6082.1 CTACTATTTATTACTTACTATAT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr16:30755825-30755848 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 + 31767873 31767896 3'utr ZNF720 Ensembl G6086.1 AACTTAAACTTCTAATAATATTG 4 2 4 30 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr16:31767873-31767896 NA NA NA NA UAUU minimal chr16 + 31818417 31818444 NoAnnotation G6087.1 CTAACTTCCACTAATCCATTACCCTTT 18 2 6 158 0.315789474 0.477121255 0 0.4 0.684210526 6 12 1 6 chr16:31818417-31818444 NA NA NA NA NA NA chr16 + 33963057 33963084 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6095.1 AATGAGTCCACTTTAAATCCTTTAACG 591 6 29 4792 0.032366071 -1.023323429 0.810267857 0.432989691 0.938616071 55 562 305 29 chr16:33963057-33963084 NA NA NA NA NA NA chr16 + 33963102 33963165 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6096.1 AGTTTAGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTT 1204 7 27 5865 0.017612524 -1.087150176 0.523809524 0.393846154 0.871493803 197 1177 329 27 chr16:33963102-33963165 NA NA NA NA UAUU minimal chr16 + 33963212 33963270 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6097.1 AGGCGAGCCACTGCCCGTCCCCGCCCCTTGCCTCTTGGCGCCCCCTCGATGCTCTTAG 195 2 181 930 0.909547739 1.558708571 0.462311558 0.528301887 0.874371859 25 14 4 181 chr16:33963212-33963270 NA NA NA NA NA NA chr16 + 33963334 33963374 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6098.1 CCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCG 736 4 12 2660 0.014201183 -0.962211439 0.823668639 0.34375 0.875739645 105 724 109 12 chr16:33963334-33963374 NA NA NA NA NA NA chr1 + 24086701 24086721 3'utr TCEB3 Ensembl G61.1 CATCTCTTTCTTACTAACTG 3 3 3 24 1 0.477121255 1 0 0 3 0 0 3 chr1:24086701-24086721 NA NA NA NA NA NA chr16 + 33963564 33963594 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6100.1 TAGTTCTGACCATAAACGATGCCGACTGGC 492 2 492 1240 0.991935484 1.992995098 0.881048387 0.7 0.987903226 6 0 4 492 chr16:33963564-33963594 NA NA NA NA NA NA chr16 + 33963717 33963759 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6101.1 ACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACATG 2211 9 55 10917 0.020265291 -0.962067847 0.312822402 0.36746988 0.883935151 315 2156 503 55 chr16:33963717-33963759 NA NA NA NA NA NA chr16 + 33963902 33963947 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6102.1 CTAGTTACGTGACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAG 110 3 5 555 0.037313433 -0.698970004 0.410447761 0.254901961 0.71641791 38 105 24 5 chr16:33963902-33963947 NA NA NA NA NA NA chr16 + 33964134 33964164 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6104.1 GAGGAATTTCCAGTAAGTGCGGGTCATAAG 178 3 69 789 0.338235294 0.407485327 0.897058824 0.5625 0.931372549 14 109 26 69 chr16:33964134-33964164 NA NA NA NA NA NA chr16 + 47538727 47538756 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6109.1 CTGAGGTGGGATCCCGAGGCCTCTCCAGT 3846 5 64 15063 0.013614125 -1.126293791 0.373962987 0.484764543 0.96043395 186 3782 855 64 chr16:47538727-47538756 NA NA NA NA NA NA chr1 + 171458077 171458097 intron PRRC2C Ensembl G611.1 TATTAAAAAAACTATTGGGT 3 3 3 17 1 0.477121255 0 0 0 3 0 0 3 chr1:171458077-171458097 NA NA NA NA UAUU minimal chr16 + 53360819 53360840 3'utr CHD9 Ensembl G6120.1 TCACTAAAATCTAATTTATAT 3 2 3 24 1 0.477121255 0 0 0 3 0 0 3 chr16:53360819-53360840 minimal NA NA AUUUA NA minimal chr16 + 53360986 53361010 3'utr CHD9 Ensembl G6121.1 ACACTTCTATTTAATATTCATTGG 4 2 4 40 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr16:53360986-53361010 minimal NA NA AUUUA UAUU minimal chr16 + 56083797 56083817 repeat SINE-MIRc RepeatMasker G6128.1 TAATATAAAATACTTTTCAC 29 4 11 221 0.366666667 0.740362689 0 0.666666667 0.933333333 2 18 1 11 chr16:56083797-56083817 NA NA NA NA NA NA chr16 + 56807048 56807068 intron NUP93 Ensembl G6132.1 CAACTTATTTATTATTAGAT 2 2 2 18 1 0.301029996 0.5 0 0 2 0 0 2 chr16:56807048-56807068 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 171476926 171476952 intron PRRC2C Ensembl G614.1 AATGTGGGCTATCTTTCTATTTATTT 4 2 4 50 1 0.602059991 0.25 0.5 0.75 1 0 0 4 chr1:171476926-171476952 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 + 67182004 67182029 3'utr C16orf70 Ensembl G6150.1 TATAATTTTATCCCATTTTTAATAT 7 4 6 77 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr16:67182004-67182029 minimal NA NA NA NA NA chr16 + 67672323 67672347 3'utr CTCF Ensembl G6151.1 CTTGTAAATAACTTTTTTTACATT 9 4 8 91 0.888888889 0.903089987 0 0.5 0.666666667 3 1 0 8 chr16:67672323-67672347 NA NA NA NA NA NA chr16 + 69376558 69376585 repeat Low_complexity-AT_rich RepeatMasker G6163.1 TAATTATTTTTATATTATATATATTAT 6 5 6 90 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr16:69376558-69376585 minimal NA NA NA UAUU minimal chr16 + 69376908 69376929 3'utr NIP7 Ensembl G6165.1 CAAAATTAAACTATTTCTTTA 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr16:69376908-69376929 NA NA NA NA UAUU minimal chr16 + 69496998 69497020 3'utr CYB5B Ensembl G6168.1 ATTTAATTCTTTTATTTATCAT 38 6 26 472 0.684210526 1.414973348 0 0.5 0.868421053 5 12 0 26 chr16:69496998-69497020 UUAUUUAU NA NA AUUUA UAUU minimal chr16 + 69497050 69497070 3'utr CYB5B Ensembl G6169.1 CACCTATTAAACTTAAAACT 3 2 3 15 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr16:69497050-69497070 NA NA NA NA UAUU minimal chr16 + 69732631 69732659 repeat Simple_repeat-(TTA)n RepeatMasker G6170.1 CTCACTATATATTTAATATTTTATTATT 32 11 30 380 0.857142857 0.875061263 0 0.32 0.514285714 17 2 3 30 chr16:69732631-69732659 minimal NA NA AUUUA UAUU minimal chr16 + 69738240 69738263 repeat Low_complexity-AT_rich RepeatMasker G6176.1 CCATTTTTAATTTTTATTTAATT 5 3 5 69 1 0.698970004 0 0.25 0.4 3 0 0 5 chr16:69738240-69738263 minimal NA NA AUUUA UAUU minimal chr16 + 70606031 70606052 coding SF3B3 Ensembl G6179.1 CACACACCCTTAATTTTTAAT 4 2 2 30 0.75 0.477121255 0.5 0 0 4 1 0 3 chr16:70606031-70606052 NA NA NA NA NA NA chr16 + 71891167 71891190 repeat Simple_repeat-(TCTA)n RepeatMasker G6182.1 TAAACACAATATCTATCAATATC 4 3 3 23 0.75 0.477121255 0 0 0 4 1 0 3 chr16:71891167-71891190 NA NA NA NA NA NA chr16 + 75611384 75611404 3'utr GABARAPL2 Ensembl G6190.1 ATTTATTTCTTAATATATTG 5 3 5 55 1 0.698970004 1 0.666666667 0.8 1 0 0 5 chr16:75611384-75611404 minimal NA NA AUUUA UAUU minimal chr16 + 75611414 75611441 3'utr GABARAPL2 Ensembl G6191.1 TTTCCTTAGACTAGTAAATTATCATAC 24 3 21 201 0.807692308 0.84509804 0 0.5 0.730769231 7 3 2 21 chr16:75611414-75611441 minimal NA NA NA NA NA chr16 + 75686173 75686195 intron TERF2IP Ensembl G6192.1 TTTACTTTTTTTAAACTTAATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr16:75686173-75686195 NA NA NA NA NA NA chr16 + 81062831 81062852 3'utr CENPN Ensembl G6196.1 ATACTTCTCATAATCTATTTT 16 3 16 152 1 1.204119983 0 0.6 0.875 2 0 0 16 chr16:81062831-81062852 NA NA NA NA UAUU minimal chr16 + 81744878 81744901 3'utr CMIP Ensembl G6200.1 TTTTATATATATTTAATCTTATT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr16:81744878-81744901 minimal NA NA AUUUA UAUU minimal chr16 + 85706966 85706987 NoAnnotation G6205.1 TTTTTATTACTTTAACTATTG 4 4 4 47 1 0.602059991 0.5 0 0 4 0 0 4 chr16:85706966-85706987 minimal NA NA NA UAUU minimal chr16 - 239127 239150 3'utr LUC7L Ensembl G6222.1 TCTAAAATTACCCTTTATATTTG 6 4 5 58 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr16:239127-239150 minimal NA NA NA UAUU minimal chr16 - 2303219 2303240 3'utr RNPS1 Ensembl G6234.1 TACTATAAAATTTCTCTTTTG 19 4 19 190 1 1.278753601 0 0.625 0.842105263 3 0 0 19 chr16:2303219-2303240 NA NA NA NA NA NA chr16 - 3272474 3272497 3'utr ZNF200 Ensembl G6239.1 TTTTTTCCATTATATTTTTATAG 4 3 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr16:3272474-3272497 minimal NA NA NA UAUU minimal chr16 - 3273224 3273249 3'utr ZNF200 Ensembl G6240.1 ATTCCTTTTCACAACATAATTTAGG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr16:3273224-3273249 minimal NA NA AUUUA NA minimal chr16 - 3776846 3776877 3'utr CREBBP Ensembl G6246.1 TAAAATACCAACTCATTTCTTATATCATATT 4 3 3 36 0.75 0.477121255 0 0 0 4 1 0 3 chr16:3776846-3776877 minimal NA NA NA UAUU minimal chr16 - 3777356 3777381 3'utr CREBBP Ensembl G6247.1 TTCATTATATTCATATTTTTTATTT 6 5 6 88 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr16:3777356-3777381 minimal NA NA NA UAUU minimal chr16 - 4560711 4560735 3'utr C16orf5 Ensembl G6249.1 ATTCCTATTAATAAAATTATTTAA 4 3 4 40 1 0.602059991 0 0 0 4 0 0 4 chr16:4560711-4560735 minimal NA NA AUUUA UAUU minimal chr16 - 5339345 5339365 NoAnnotation G6251.1 ATGGGCCCTCCTCCTCCTCC 17 2 2 83 0.111111111 0 0 0.25 0.833333333 3 15 1 2 chr16:5339345-5339365 NA NA NA NA NA NA chr16 - 11928611 11928633 NoAnnotation G6255.1 CATCTAAAATATAAAATTATTT 10 2 10 74 0.909090909 0.698970004 0 0.6 0.818181818 2 0 1 10 chr16:11928611-11928633 minimal NA NA NA UAUU minimal chr16 - 11999708 11999732 intron GSPT1 Ensembl G6256.1 ACCTATAATTTATTTATTTATTTA 4 2 3 51 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr16:11999708-11999732 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr16 - 15961234 15961262 3'utr FOPNL Ensembl G6260.1 TATTATTAATTAAATAACTTATTTATTG 15 7 12 193 0.8 1.079181246 0 0.153846154 0.266666667 11 3 0 12 chr16:15961234-15961262 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr16 - 18803163 18803186 3'utr ARL6IP1 Ensembl G6262.1 ATTTTTTTTTATTATTTCATAAG 3 2 2 43 0.666666667 0.301029996 0 0 0 3 1 0 2 chr16:18803163-18803186 minimal NA NA NA UAUU minimal chr16 - 18803414 18803441 3'utr ARL6IP1 Ensembl G6263.1 CTTCTTATAATCATTCTTAACTTCTTG 7 3 7 74 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr16:18803414-18803441 minimal NA NA NA NA NA chr16 - 19717727 19717766 3'utr C16orf88 Ensembl G6265.1 AAATGGGTGCTATTATTAGCCCCATCTTATAGATGAGGC 5 2 4 35 0.8 0.602059991 0 0 0 5 1 0 4 chr16:19717727-19717766 minimal NA NA NA UAUU minimal chr16 - 20808794 20808817 3'utr ERI2 Ensembl G6266.1 TCTAAACTATTTTTAAATTATTT 12 3 8 145 0.666666667 0.903089987 0 0.428571429 0.666666667 4 4 0 8 chr16:20808794-20808817 minimal NA NA NA UAUU minimal chr16 - 22357321 22357348 3'utr CDR2 Ensembl G6270.1 CATTCTTTTAACTTAAAACTATTTAAG 13 7 13 133 1 1.113943352 0 0.181818182 0.307692308 9 0 0 13 chr16:22357321-22357348 minimal NA NA AUUUA UAUU minimal chr16 - 23580988 23581011 NoAnnotation G6272.1 AATAAACTTTATTTCTTTTATTT 4 2 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr16:23580988-23581011 minimal NA NA NA UAUU minimal chr16 - 23614634 23614654 3'utr PALB2 Ensembl G6273.1 ACTTATTTTTTATTCTAATG 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr16:23614634-23614654 minimal NA NA NA UAUU minimal chr16 - 24931057 24931080 3'utr ARHGAP17 Ensembl G6276.1 TTAACTATCTATTTAATAAAATG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr16:24931057-24931080 minimal NA NA AUUUA UAUU minimal chr16 - 29917691 29917721 3'utr KCTD13 Ensembl G6283.1 TTTCATATTATTTATTATTTTAATTTTCTA 12 5 11 200 0.916666667 1.041392685 0 0.2 0.333333333 8 1 0 11 chr16:29917691-29917721 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr16 - 29941291 29941316 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G6284.1 ATAATAGGTTTGTGATGCCCTTAGA 7 2 7 51 1 0.84509804 0 0.5 0.714285714 2 0 0 7 chr16:29941291-29941316 NA NA NA NA NA NA chr16 - 30932161 30932188 NoAnnotation G6288.1 TATTTATTATTTATTTTTCTACTTTCC 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr16:30932161-30932188 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr16 - 46831869 46831890 NoAnnotation G6293.1 CTTTATCTCACAAATTTTATT 4 3 4 37 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr16:46831869-46831890 minimal NA NA NA UAUU minimal chr16 - 46994926 46994951 intron DNAJA2 Ensembl G6295.1 CATTTATTTTAAATTTATTATTATT 3 2 2 40 1 0.477121255 0 0 0 3 0 0 3 chr16:46994926-46994951 minimal NA NA AUUUA UAUU minimal chr16 - 47189960 47189993 intron ITFG1 Ensembl G6298.1 AATCTAATACTTATTCCTATTTTCAAGTAGATA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr16:47189960-47189993 minimal NA NA NA UAUU minimal chr1 + 174963702 174963726 3'utr RABGAP1L Ensembl G631.1 TATAACTTTTAATAACTATATATT 6 3 4 66 0.666666667 0.602059991 0.166666667 0 0 6 2 0 4 chr1:174963702-174963726 NA NA NA NA UAUU minimal chr16 - 51170665 51170687 3'utr SALL1 Ensembl G6311.1 CATTAACTTATTTTCTATATCC 11 5 10 111 0.909090909 1 0 0.25 0.454545455 6 1 0 10 chr16:51170665-51170687 minimal NA NA NA UAUU minimal chr16 - 54885910 54885931 NoAnnotation G6316.1 ATCATATTTATATATTTATTC 6 3 3 69 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr16:54885910-54885931 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 - 54954328 54954353 lincRNA CRNDE Ensembl G6317.1 TAACTAATAATTATCTTATTTAAAT 5 4 5 47 1 0.698970004 0 0.25 0.4 3 0 0 5 chr16:54954328-54954353 minimal NA NA AUUUA UAUU minimal chr16 - 58593328 58593354 intron CNOT1 Ensembl G6329.1 TTCTAATTTCTAATACTTTTATTTAT 3 2 3 37 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr16:58593328-58593354 UUAUUUAU NA NA AUUUA UAUU minimal chr16 - 58593807 58593835 snoRNA SNORA50 Ensembl G6330.1 AAGCACTGCCTTTGAACCTGATGTGTCT 6 2 2 35 0.333333333 0.301029996 0 0.2 0.333333333 4 4 0 2 chr16:58593807-58593835 NA NA NA NA NA NA chr16 - 67718672 67718692 intron GFOD2 Ensembl G6340.1 TCAACTTCTTCTCTTTATCT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr16:67718672-67718692 minimal NA NA NA NA NA chr16 - 70283852 70283880 repeat LTR-LOR1-int RepeatMasker G6347.1 CTTTTTATTTTTTTATATTTATTTTTTG 11 7 10 196 0.909090909 1 0 0.1 0.181818182 9 1 0 10 chr16:70283852-70283880 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 - 70284033 70284062 repeat LTR-LOR1-int RepeatMasker G6348.1 CATATATATAAAACCATTATTATTATTAT 47 8 34 411 0.714285714 1.06694679 0 0.310344828 0.591836735 20 12 2 35 chr16:70284033-70284062 minimal NA NA NA UAUU minimal chr16 - 70413445 70413470 3'utr ST3GAL2 Ensembl G6350.1 TAATTTAAACACACTTTTTTATTTC 4 3 4 47 1 0.602059991 0 0 0 4 0 0 4 chr16:70413445-70413470 minimal NA NA AUUUA UAUU minimal chr16 - 71481572 71481598 repeat LINE-L1M5 RepeatMasker G6353.1 ATACTCTACCTACATTAATTTATTTG 7 5 6 72 0.666666667 0.301029996 0 0 0 9 1 2 6 chr16:71481572-71481598 minimal NA NA AUUUA UAUU minimal chr16 - 72819730 72819758 3'utr ZFHX3 Ensembl G6363.1 CATTTATTTTTTATTTATCCTTCTTTTG 4 2 3 67 0.75 0.477121255 0 0 0 4 1 0 3 chr16:72819730-72819758 UUAUUUAU NA NA AUUUA UAUU minimal chr16 - 75480277 75480299 3'utr TMEM170A Ensembl G6371.1 CTATTTAAATTTTTATTCTACT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr16:75480277-75480299 minimal NA NA AUUUA UAUU minimal chr16 - 85812994 85813016 3'utr COX4NB Ensembl G6382.1 TTAACTAACCTTTTATAATCTG 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr16:85812994-85813016 minimal NA NA NA NA NA chr16 - 87863724 87863747 3'utr SLC7A5 Ensembl G6383.1 TGGCTGGGACCTTCTTTATTCTG 9 4 8 77 0.888888889 0.903089987 0.222222222 0.166666667 0.444444444 5 1 0 8 chr16:87863724-87863747 minimal NA NA NA UAUU minimal chr16 - 87866275 87866304 3'utr SLC7A5 Ensembl G6384.1 TTTACTTATATATATATTTTTTTTAAACT 6 4 5 93 0.833333333 0.698970004 0 0 0 6 1 0 5 chr16:87866275-87866304 minimal NA NA NA UAUU minimal chr16 - 89282665 89282690 NoAnnotation G6387.1 TTTTATTTATTATTTATTAATTTTG 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr16:89282665-89282690 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr16 - 89458170 89458201 intron ANKRD11 Ensembl G6388.1 TTACTATTTATTTTTAGTTAGATGGGGAGGA 3 2 3 38 1 0.477121255 0 0 0 3 0 0 3 chr16:89458170-89458201 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr16 - 89952841 89952866 NoAnnotation G6390.1 AAACTCATATTATTATTATTATTAT 3 3 3 34 1 0.477121255 0 0 0 3 0 0 3 chr16:89952841-89952866 minimal NA NA NA UAUU minimal chr17 + 904890 904915 3'utr TIMM22 Ensembl G6393.1 TATTTTATTTTCAAATTCCCTATTC 4 3 3 51 0.75 0.477121255 0 0 0 4 1 0 3 chr17:904890-904915 minimal NA NA NA UAUU minimal chr17 + 1742126 1742152 intron RPA1 Ensembl G6395.1 CACTTTATTTATTTATTTTTTTAATT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr17:1742126-1742152 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 2569879 2569907 repeat SINE-MIR RepeatMasker G6397.1 CTCAATAAATATTAGCTTTTATTAATAT 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:2569879-2569907 minimal NA NA NA UAUU minimal chr1 + 178447697 178447721 repeat Low_complexity-AT_rich RepeatMasker G640.1 CTCTAAATAATTTATTTTTTATTT 3 2 2 41 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:178447697-178447721 minimal NA NA AUUUA UAUU minimal chr17 + 3629995 3630025 3'utr GSG2 Ensembl G6401.1 TTTATATTTATAAACCCTCTTTTTTTTTTT 5 3 4 73 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr17:3629995-3630025 minimal NA NA AUUUA UAUU minimal chr17 + 4894191 4894215 repeat SINE-AluSq2 RepeatMasker G6403.1 CAAAAAATCTCATAATATTTTATT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:4894191-4894215 minimal NA NA NA UAUU minimal chr17 + 5286579 5286601 3'utr RABEP1 Ensembl G6409.1 TAATTATTATTTAACTCTTAAC 5 3 3 52 1 0.698970004 0.4 0.25 0.4 3 0 0 5 chr17:5286579-5286601 minimal NA NA AUUUA UAUU minimal chr17 + 5335965 5335988 3'utr RPAIN Ensembl G6410.1 CCTTTTATTTATAACTTATTTTG 44 9 34 536 0.772727273 1.531478917 0.113636364 0.454545455 0.727272727 12 10 0 34 chr17:5335965-5335988 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 5393161 5393196 3'utr MIS12 Ensembl G6412.1 ATTAAACGGGTGGCTCCTTTAATATTATTATTATT 18 8 16 219 0.842105263 0.903089987 0.210526316 0.5 0.736842105 5 2 1 16 chr17:5393161-5393196 minimal NA NA NA UAUU minimal chr17 + 5393769 5393799 3'utr MIS12 Ensembl G6413.1 CCTTATACCTAATATTTATTTATTCACACT 149 13 126 1670 0.828947368 1.498310554 0 0.56 0.855263158 22 23 3 126 chr17:5393769-5393799 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 179889165 179889196 NoAnnotation G642.1 CTATTTTAGTAATTTAAATAAATTTACTTTC 6 5 6 62 1 0.77815125 0 0 0 6 0 0 6 chr1:179889165-179889196 minimal NA NA AUUUA UAUU minimal chr17 + 7474913 7474935 3'utr SENP3 Ensembl G6423.1 TTTTTCATATTTAAATGTTTCA 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:7474913-7474935 minimal NA NA AUUUA UAUU minimal chr17 + 7757406 7757427 3'utr KDM6B Ensembl G6429.1 TCCCACTCACCTCTATTTATT 4 2 2 32 0.5 0.301029996 0 0 0 4 2 0 2 chr17:7757406-7757427 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 179893142 179893165 NoAnnotation G643.1 CTTAAATACACTTCCTCTTATTT 3 2 2 30 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:179893142-179893165 minimal NA NA NA UAUU minimal chr17 + 8371319 8371343 3'utr NDEL1 Ensembl G6437.1 GCTTTGTAGCTTTTATTTATTCAG 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr17:8371319-8371343 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 8382498 8382520 intron NDEL1 Ensembl G6438.1 ATAATTTACTAATTACCTATTG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr17:8382498-8382520 minimal NA NA AUUUA UAUU minimal chr17 + 8386802 8386824 NoAnnotation G6439.1 CTAATATTTTATCCAATATTTA 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:8386802-8386824 minimal NA NA AUUUA UAUU minimal chr17 + 10619249 10619275 repeat Low_complexity-AT_rich RepeatMasker G6443.1 CTTTTTTTAAATTTTATCACATATTT 3 2 3 44 1 0.477121255 0 0 0 3 0 0 3 chr17:10619249-10619275 minimal NA NA NA UAUU minimal chr17 + 14046551 14046576 repeat Low_complexity-AT_rich RepeatMasker G6449.1 CAAATACCATTATTTACTATTTATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:14046551-14046576 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 14249036 14249063 repeat Low_complexity-AT_rich RepeatMasker G6451.1 AAATCTATTTTATAATAATTTATTTTT 12 5 12 160 1 1.079181246 0 0.571428571 0.75 3 0 0 12 chr17:14249036-14249063 minimal NA NA AUUUA UAUU minimal chr17 + 15612086 15612112 intron ZNF286A Ensembl G6454.1 CATATCATCATAATTTATTCATTATC 4 2 4 38 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr17:15612086-15612112 minimal NA NA AUUUA UAUU minimal chr17 + 15622014 15622036 3'utr ZNF286A Ensembl G6455.1 CCTTCATATTTATCTACTTTTT 5 3 4 61 0.8 0.602059991 0.8 0.25 0.4 3 1 0 4 chr17:15622014-15622036 minimal NA NA AUUUA UAUU minimal chr17 + 15867982 15868003 intron ADORA2B Ensembl G6456.1 CTATTAAAATTTCTATTTATT 5 3 5 55 1 0.698970004 0 0.25 0.4 3 0 0 5 chr17:15867982-15868003 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 15919151 15919175 intron TTC19 Ensembl G6457.1 ATATATTTACTAATCTTATTTATT 8 6 8 99 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr17:15919151-15919175 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 18686381 18686405 repeat LINE-L2a RepeatMasker G6467.1 TTCCCACTATTTATTTATTTATTG 3 3 3 38 1 0.477121255 1 0 0 3 0 0 3 chr17:18686381-18686405 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 19238332 19238352 3'utr EPN2 Ensembl G6468.1 TTTAAATCCTCTTATTTATG 5 2 4 51 0.8 0.602059991 1 0.333333333 0.6 2 1 0 4 chr17:19238332-19238352 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 19355612 19355647 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6469.1 GGCAGATCTTGGTGGTAGTAGTAAATATTCAAATG 6 2 6 47 1 0.77815125 0.5 0.2 0.333333333 4 0 0 6 chr17:19355612-19355647 NA NA NA NA UAUU minimal chr17 + 19355690 19355719 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6470.1 CAGTTGAACATGGGTCAGTCGGTCCTGAG 905 6 25 5234 0.023877746 -0.757396029 0.792741165 0.319727891 0.904489016 100 880 142 25 chr17:19355690-19355719 NA NA NA NA NA NA chr17 + 26689048 26689077 3'utr TMEM199 Ensembl G6483.1 CTTAGTTATTTATCCAATAAATATTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:26689048-26689077 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 27870028 27870050 coding TAOK1 Ensembl G6495.1 TCTTATACATAACTTAATAATT 4 2 4 34 1 0.602059991 0 1 1 0 0 0 4 chr17:27870028-27870050 minimal NA NA NA NA NA chr17 + 27873060 27873080 NoAnnotation G6498.1 CACATATTTTTTCCTCCCCT 5 2 4 41 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr17:27873060-27873080 NA NA NA NA UAUU minimal chr17 + 28513790 28513813 NoAnnotation G6505.1 AAACTCAGGAGAAATAATTATAC 3 2 3 11 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:28513790-28513813 minimal NA NA NA NA NA chr1 + 181059932 181059959 3'utr IER5 Ensembl G651.1 TAACTTCTACGTGTCTAACACGTATTA 3 3 3 20 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:181059932-181059959 NA NA NA NA UAUU minimal chr17 + 29523138 29523164 intron NF1 Ensembl G6519.1 TTATATTATATTTCCATATTCTCATA 4 3 3 43 1 0.602059991 0 0 0 4 0 0 4 chr17:29523138-29523164 minimal NA NA NA UAUU minimal chr17 + 29548215 29548239 repeat Low_complexity-AT_rich RepeatMasker G6520.1 TTTTAATTTATATAATAATCTATT 4 3 3 53 0.75 0.477121255 0 0 0 4 1 0 3 chr17:29548215-29548239 minimal NA NA AUUUA UAUU minimal chr17 + 30323902 30323927 repeat Low_complexity-AT_rich RepeatMasker G6529.1 TATTTCTAAATTAATTTAAATATTT 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr17:30323902-30323927 minimal NA NA AUUUA UAUU minimal chr1 + 181061581 181061612 repeat Simple_repeat-(TTTA)n RepeatMasker G653.1 TCTTCCTTTATTTATTTATTTATTTAATTAT 4 3 4 75 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:181061581-181061612 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 30327214 30327236 3'utr SUZ12 Ensembl G6532.1 CATTTTCATATTCTTTATTTAT 18 5 13 235 0.722222222 1.113943352 0 0.555555556 0.777777778 4 5 0 13 chr17:30327214-30327236 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 30808888 30808908 3'utr PSMD11 Ensembl G6540.1 CTTTTTAATTTACCTCTTAG 3 2 3 30 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr17:30808888-30808908 minimal NA NA AUUUA NA minimal chr17 + 30809143 30809165 3'utr PSMD11 Ensembl G6541.1 TTTTCATAATAAATTTATATTT 11 5 7 125 0.636363636 0.84509804 0 0.375 0.545454545 5 4 0 7 chr17:30809143-30809165 minimal NA NA AUUUA UAUU minimal chr17 + 30818095 30818115 3'utr CDK5R1 Ensembl G6542.1 TTAATATTAATTTATATTTG 3 2 3 33 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr17:30818095-30818115 minimal NA NA AUUUA UAUU minimal chr17 + 30818197 30818223 3'utr CDK5R1 Ensembl G6543.1 TAATTTAATTCCCCTTCCCTTATTTT 5 2 3 49 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr17:30818197-30818223 minimal NA NA AUUUA UAUU minimal chr17 + 34173354 34173379 repeat SINE-MIR RepeatMasker G6548.1 CACTATATAATTTTTAGCTATTAGT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:34173354-34173379 NA NA NA NA UAUU minimal chr17 + 34851605 34851625 3'utr ZNHIT3 Ensembl G6549.1 CATTATTCATAATTTAATTG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr17:34851605-34851625 minimal NA NA AUUUA UAUU minimal chr1 + 181995857 181995878 NoAnnotation G655.1 ATTTCACTTTTCTTATTTATC 8 3 4 100 0.5 0.602059991 0 0.5 0.75 2 4 0 4 chr1:181995857-181995878 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 34895101 34895123 3'utr PIGW Ensembl G6550.1 CTTTTACAATAAATATAAAATG 3 3 3 21 1 0.477121255 1 0 0 3 0 0 3 chr17:34895101-34895123 NA NA NA NA NA NA chr17 + 35322018 35322047 intron AATF Ensembl G6556.1 TTCGCTTCCTATTTATTTATTTTTTCCCT 4 4 4 58 1 0.602059991 0 0 0 4 0 0 4 chr17:35322018-35322047 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 35873470 35873500 3'utr DUSP14 Ensembl G6560.1 TAAGTTAAATACACCCTTATTATTTAGCTG 23 4 22 214 0.956521739 1.342422681 0.347826087 0.416666667 0.695652174 7 1 0 22 chr17:35873470-35873500 minimal NA NA AUUUA UAUU minimal chr17 + 35873551 35873590 3'utr DUSP14 Ensembl G6561.1 CCCAGGATTATATTAGCATTATTTTTAATAAATCTATAT 12 7 12 128 1 1.079181246 0.416666667 0.090909091 0.166666667 10 0 0 12 chr17:35873551-35873590 minimal NA NA NA UAUU minimal chr17 + 36883700 36883722 3'utr MLLT6 Ensembl G6564.1 CATTTTATTCTTCTTAATCTAT 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr17:36883700-36883722 minimal NA NA NA UAUU minimal chr17 + 37690718 37690739 3'utr CDK12 Ensembl G6571.1 TAATATATTAAATTTTTTTCT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:37690718-37690739 NA NA NA NA UAUU minimal chr17 + 38248835 38248857 3'utr THRA Ensembl G6573.1 TCTATTTTACTATATATTTATG 6 3 6 72 1 0.77815125 1 0.666666667 0.833333333 1 0 0 6 chr17:38248835-38248857 minimal NA NA AUUUA UAUU minimal chr17 + 38292751 38292771 3'utr MSL1 Ensembl G6575.1 TCTTATTTTTCCCTACATGG 3 2 3 27 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr17:38292751-38292771 minimal NA NA NA UAUU minimal chr17 + 38293056 38293077 NoAnnotation G6576.1 CTTCAATTTATTATATTTATT 4 4 4 48 1 0.602059991 0.25 0 0 4 0 0 4 chr17:38293056-38293077 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 38327064 38327093 repeat Low_complexity-AT_rich RepeatMasker G6577.1 CTTCTTATCCTTAATATTATTTTAATTTT 18 8 13 230 0.722222222 1.113943352 0 0.125 0.222222222 14 5 0 13 chr17:38327064-38327093 minimal NA NA NA UAUU minimal chr17 + 38440360 38440381 3'utr WIPF2 Ensembl G6578.1 TTAATAAACTACCTATTTATT 7 5 7 62 1 0.84509804 0.142857143 0.2 0.428571429 4 0 0 7 chr17:38440360-38440381 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 39847852 39847886 3'utr EIF1 Ensembl G6583.1 TAATGTATTTAAACCCTTATTTAAATAAAACTTG 43 8 38 393 0.844444444 1.102662342 0.044444444 0.625 0.866666667 6 5 2 38 chr17:39847852-39847886 minimal NA NA AUUUA UAUU minimal chr17 + 40724671 40724701 repeat Low_complexity-AT_rich RepeatMasker G6586.1 AAATTAAATATTTTTATATAAAATTAAATT 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:40724671-40724701 minimal NA NA NA UAUU minimal chr17 + 40767191 40767216 3'utr TUBG1 Ensembl G6588.1 CAAACACATTTACTTCTCCTCTTAT 5 4 5 40 1 0.698970004 0.4 0 0 5 0 0 5 chr17:40767191-40767216 minimal NA NA AUUUA NA minimal chr17 + 40994615 40994636 3'utr PSME3 Ensembl G6591.1 AACTATTTCTCTTTATTTATA 7 2 5 79 0.714285714 0.698970004 0 0.75 0.857142857 1 2 0 5 chr17:40994615-40994636 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 41145504 41145525 3'utr RUNDC1 Ensembl G6592.1 ATATTTCATTATAATTAGTTC 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:41145504-41145525 minimal NA NA NA UAUU minimal chr17 + 42786848 42786873 intron DBF4B Ensembl G6598.1 ACTTATTTATTCATTTTATTTATTG 2 2 2 30 1 0.301029996 1 0 0 2 0 0 2 chr17:42786848-42786873 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 25665540 25665565 repeat Low_complexity-AT_rich RepeatMasker G66.1 TAATCATATATTTTAATATTTAATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:25665540-25665565 minimal NA NA AUUUA UAUU minimal chr17 + 44834085 44834111 3'utr NSF Ensembl G6601.1 ACTTACTTAGAATTTATCCTTTATTT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr17:44834085-44834111 minimal NA NA AUUUA UAUU minimal chr17 + 45762616 45762641 NoAnnotation G6606.1 CAATCTATTTACTCTTACAAATATT 7 2 3 74 0.375 0.176091259 0.25 0.4 0.625 3 4 1 3 chr17:45762616-45762641 minimal NA NA AUUUA UAUU minimal chr17 + 46138718 46138740 3'utr NFE2L1 Ensembl G6607.1 CTTTTATAAATTATTTTCCTTG 4 2 3 49 1 0.602059991 0.5 0 0 4 0 0 4 chr17:46138718-46138740 minimal NA NA NA UAUU minimal chr1 + 183113392 183113417 3'utr LAMC1 Ensembl G661.1 CTATTAATTATTTCAAATTTATATT 4 3 4 52 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:183113392-183113417 minimal NA NA AUUUA UAUU minimal chr17 + 49538522 49538543 repeat LTR-LTR85c RepeatMasker G6621.1 TCAACACTAATATCTAATATT 4 2 2 29 0.4 0 0 0 0 5 2 1 2 chr17:49538522-49538543 NA NA NA NA UAUU minimal chr17 + 53113963 53113987 intron STXBP4 Ensembl G6627.1 TCTTATTAACTTATATATTTCTTT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:53113963-53113987 minimal NA NA NA UAUU minimal chr17 + 53123936 53123962 intron STXBP4 Ensembl G6628.1 TATAATATTAATCTTAATAACTATTA 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr17:53123936-53123962 NA NA NA NA UAUU minimal chr17 + 54941284 54941310 3'utr DGKE Ensembl G6629.1 AAATTTAGTCTATTAATTAAAATTCT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:54941284-54941310 minimal NA NA AUUUA UAUU minimal chr17 + 55758060 55758085 NoAnnotation G6631.1 CTACAATTTTAATATTTAACATATT 8 4 8 78 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr17:55758060-55758085 minimal NA NA AUUUA UAUU minimal chr17 + 56780589 56780614 coding RAD51C Ensembl G6633.1 ATAATATTCTTTCTCATATTTATTA 10 6 8 131 0.727272727 0.602059991 0 0.1 0.181818182 9 2 1 8 chr17:56780589-56780614 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 57193310 57193331 repeat Low_complexity-AT_rich RepeatMasker G6639.1 CCTTTTTAATTTTCTATTTAT 3 2 3 39 1 0.477121255 0 0 0 3 0 0 3 chr17:57193310-57193331 minimal NA NA AUUUA UAUU minimal chr1 + 183496370 183496392 intron SMG7 Ensembl G664.1 AATATTATATAACTTATTTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:183496370-183496392 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 57281340 57281364 NoAnnotation G6642.1 TATTTATAACAATAATATTTTATG 4 3 4 43 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr17:57281340-57281364 minimal NA NA AUUUA UAUU minimal chr17 + 57291746 57291778 intron SMG8 Ensembl G6644.1 CTTAATCTTATATATTCTTTTATTTATTTATT 8 7 7 139 0.875 0.84509804 0 0 0 8 1 0 7 chr17:57291746-57291778 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 57292508 57292529 3'utr SMG8 Ensembl G6645.1 TTCTACTTTTTCATTATATTG 19 7 16 227 0.842105263 1.204119983 0.684210526 0.454545455 0.684210526 6 3 0 16 chr17:57292508-57292529 minimal NA NA NA UAUU minimal chr17 + 57351297 57351319 repeat Low_complexity-AT_rich RepeatMasker G6646.1 TATATTTATTTTAAATAATATT 4 3 4 46 1 0.602059991 0.25 0 0 4 0 0 4 chr17:57351297-57351319 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 57685163 57685184 3'utr DHX40 Ensembl G6648.1 ATTATACAAATTCCTTTTTAT 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:57685163-57685184 minimal NA NA NA NA NA chr17 + 57918633 57918655 miRNA hsa-mir-21 miRBase G6649.1 TAGCTTATCAGACTGATGTTGA 369 7 19 2926 0.044289044 -0.506576234 0.062937063 0.509090909 0.937062937 27 350 60 19 chr17:57918633-57918655 minimal NA NA NA NA NA chr17 + 58024652 58024674 repeat Low_complexity-AT_rich RepeatMasker G6650.1 AATCTTTTTTTTATATAAATAT 4 3 4 48 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:58024652-58024674 minimal NA NA NA NA NA chr17 + 60038115 60038136 repeat Low_complexity-AT_rich RepeatMasker G6658.1 CATCTTAATATTTTAATATAT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr17:60038115-60038136 NA NA NA NA UAUU minimal chr1 + 183499133 183499159 intron SMG7 Ensembl G666.1 ATAACATTAACCTTCATTCTATTTAT 6 3 5 61 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:183499133-183499159 minimal NA NA AUUUA UAUU minimal chr17 + 61101431 61101456 intron TANC2 Ensembl G6661.1 CTTCTTTATCATATAAATTATTTAT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:61101431-61101456 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 61671264 61671294 3'utr DCAF7 Ensembl G6665.1 TTATATATTTAAACTTTCCCTCTATATTAT 77 8 68 814 0.829268293 1.054357662 0 0.318181818 0.634146341 30 9 5 68 chr17:61671264-61671294 minimal NA NA AUUUA UAUU minimal chr17 + 61671340 61671376 3'utr DCAF7 Ensembl G6666.1 CAGAACTGTACTGTAATATTTTTCTTTTATAAATAT 7 4 5 93 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr17:61671340-61671376 minimal NA NA NA UAUU minimal chr17 + 61690357 61690388 repeat LINE-L1ME4a RepeatMasker G6667.1 ATATGTATATATTTATTTAACATATTATATA 4 4 4 47 1 0.602059991 0 0 0 4 0 0 4 chr17:61690357-61690388 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 + 61706878 61706902 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6668.1 TAACTGGCTTGTGGCAGCCAAGTG 13 2 11 53 0.611111111 0.263241435 0.611111111 0.230769231 0.444444444 10 2 5 11 chr17:61706878-61706902 NA NA NA NA NA NA chr17 + 65827997 65828023 intron BPTF Ensembl G6676.1 ATTATTCTAATTTTATTTATTTATTT 2 2 2 34 1 0.301029996 0 0 0 2 0 0 2 chr17:65827997-65828023 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 66528042 66528064 3'utr PRKAR1A Ensembl G6685.1 TTATATTTGGGAGTGACTGCAA 4 2 3 28 0.75 0.477121255 0 0 0 4 1 0 3 chr17:66528042-66528064 minimal NA NA NA UAUU minimal chr17 + 70120950 70120979 3'utr SOX9 Ensembl G6689.1 AATATTCTCTATTTTAAATATTTTTAGTA 3 2 3 45 1 0.477121255 0 0 0 3 0 0 3 chr17:70120950-70120979 NA NA NA NA UAUU minimal chr17 + 70121801 70121830 repeat Low_complexity-AT_rich RepeatMasker G6690.1 TTTTTTTTTATTTATCTCTTTAATCTTTT 3 2 3 52 1 0.477121255 0 0 0 3 0 0 3 chr17:70121801-70121830 UUAUUUAU NA NA AUUUA UAUU minimal chr17 + 71244967 71244987 3'utr C17orf80 Ensembl G6693.1 CACATTAAAATTTATTTTAG 4 2 4 32 1 0.602059991 0.5 1 1 0 0 0 4 chr17:71244967-71244987 minimal NA NA AUUUA UAUU minimal chr17 + 74266800 74266827 repeat Low_complexity-AT_rich RepeatMasker G6697.1 TTTTTAATATATAACTATAATATATAT 5 3 4 65 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr17:74266800-74266827 NA NA NA NA NA NA chr17 + 74559808 74559832 NoAnnotation G6700.1 TTTTTTTTTAACATTTTATATTTT 3 2 2 46 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:74559808-74559832 minimal NA NA NA UAUU minimal chr17 + 76221152 76221172 3'utr BIRC5 Ensembl G6709.1 ATACTTCACTTTAATAACTG 10 4 9 66 0.9 0.954242509 0.9 0.5 0.7 3 1 0 9 chr17:76221152-76221172 NA NA NA NA NA NA chr17 + 77378897 77378920 NoAnnotation G6711.1 GCTTTGGGTGCTTGCTGGTGGAT 22 2 21 156 0.954545455 1.322219295 0 0.333333333 0.818181818 4 1 0 21 chr17:77378897-77378920 NA NA NA NA NA NA chr17 + 80560745 80560781 3'utr FOXK2 Ensembl G6718.1 TCATCATCATAACATTATTTATTTAAATGTAGTTAT 47 11 38 511 0.808510638 1.579783597 0.127659574 0.344827586 0.595744681 19 9 0 38 chr17:80560745-80560781 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 + 80560874 80560896 3'utr FOXK2 Ensembl G6719.1 CAATTTTAAAACATTTATTATT 6 2 3 62 0.833333333 0.698970004 0 0.5 0.666666667 2 1 0 5 chr17:80560874-80560896 minimal NA NA AUUUA UAUU minimal chr17 - 1324101 1324124 3'utr CRK Ensembl G6728.1 ATTATAACACTATACACTTTCTT 3 3 3 23 1 0.477121255 0 0 0 3 0 0 3 chr17:1324101-1324124 minimal NA NA NA NA NA chr1 + 185069568 185069597 3'utr RNF2 Ensembl G673.1 CTATTCAAATCTTTTCCCCTTTATTTAAG 13 5 12 151 0.857142857 0.77815125 0.142857143 0.166666667 0.285714286 10 1 1 12 chr1:185069568-185069597 minimal NA NA AUUUA UAUU minimal chr17 - 1324309 1324333 3'utr CRK Ensembl G6730.1 CTATATTTTATATAATCATTTCTG 8 5 7 86 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr17:1324309-1324333 minimal NA NA NA UAUU minimal chr17 - 2212423 2212444 repeat SINE-AluJb RepeatMasker G6739.1 CCTCTACAAATTATTATTATT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:2212423-2212444 minimal NA NA NA UAUU minimal chr17 - 2219230 2219253 NoAnnotation G6742.1 TTATATATATTATCCTAATTATA 5 3 4 52 0.8 0.602059991 0 0 0 5 1 0 4 chr17:2219230-2219253 minimal NA NA NA UAUU minimal chr17 - 2225699 2225721 NoAnnotation G6744.1 CACTTTATAAATAAATTATATG 13 4 13 99 1 1.113943352 0 0.5 0.769230769 3 0 0 13 chr17:2225699-2225721 minimal NA NA NA NA NA chr17 - 2319745 2319765 3'utr METTL16 Ensembl G6747.1 ATTACTTTAGTATATATTTT 5 2 4 49 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr17:2319745-2319765 NA NA NA NA UAUU minimal chr17 - 4132972 4132995 intron ANKFY1 Ensembl G6752.1 CTCAAAATAATCTATTTTATCTG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr17:4132972-4132995 minimal NA NA NA UAUU minimal chr17 - 4840937 4840966 3'utr SLC25A11 Ensembl G6756.1 CCCTGGACCCCTCTATTTATTTCCCTTCC 6 3 6 51 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr17:4840937-4840966 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 5081732 5081755 NoAnnotation G6758.1 TTTATTATAATTTCATTTTAGAC 6 2 4 48 0.666666667 0.602059991 0 1 1 0 2 0 4 chr17:5081732-5081755 minimal NA NA NA UAUU minimal chr17 - 5336163 5336188 3'utr C1QBP Ensembl G6761.1 TTCTCATTTATTATCATTTTTTTCT 14 6 12 208 0.8 0.77815125 0 0.25 0.4 9 2 1 12 chr17:5336163-5336188 minimal NA NA AUUUA UAUU minimal chr17 - 5336196 5336221 3'utr C1QBP Ensembl G6762.1 AAAAAATACCAAATTTAAATTATAT 5 2 2 13 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr17:5336196-5336221 minimal NA NA AUUUA NA minimal chr17 - 5346343 5346363 3'utr DHX33 Ensembl G6763.1 CATCTTATTAATTTTCTATG 6 3 6 60 1 0.77815125 0 0.666666667 0.833333333 1 0 0 6 chr17:5346343-5346363 minimal NA NA NA UAUU minimal chr17 - 5383402 5383425 coding DERL2 Ensembl G6766.1 TATTTCCCAATCAACCTGGTGGA 6 2 6 36 1 0.77815125 0 1 1 0 0 0 6 chr17:5383402-5383425 NA NA NA NA UAUU minimal chr17 - 6547636 6547659 3'utr MED31 Ensembl G6767.1 CTTTTTCATCCAACTTTTTATTG 7 4 5 86 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr17:6547636-6547659 minimal NA NA NA UAUU minimal chr17 - 6547683 6547711 3'utr MED31 Ensembl G6768.1 AAAACTCTTCCTATCTACCTTTATTATG 7 5 7 66 1 0.84509804 0 0 0 7 0 0 7 chr17:6547683-6547711 minimal NA NA NA UAUU minimal chr1 + 186377153 186377196 intron C1orf27 Ensembl G677.1 CTCTAAAAATAATATAGCCATTATTTATATATCTGCCAGGCAC 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr1:186377153-186377196 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 7128698 7128720 3'utr DVL2 Ensembl G6772.1 TTACTCTATTTATTTTAGTCAC 7 2 7 77 1 0.84509804 0 0.25 0.571428571 3 0 0 7 chr17:7128698-7128720 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 7494577 7494601 3'utr FXR2 Ensembl G6775.1 TATTTATTTTTCACTGTACAGTAT 5 3 5 57 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr17:7494577-7494601 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 8063989 8064022 3'utr VAMP2 Ensembl G6778.1 TTATTTATACATATATAATATTATATATATTTG 9 6 9 111 1 0.954242509 0 0 0 9 0 0 9 chr17:8063989-8064022 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 8263607 8263644 NoAnnotation G6784.1 TTTACTTTTCTTCATTATTATTATTATCATTATTATT 13 7 12 193 0.923076923 1.079181246 0 0.083333333 0.153846154 11 1 0 12 chr17:8263607-8263644 minimal NA NA NA UAUU minimal chr17 - 8271413 8271438 NoAnnotation G6787.1 AACTTATTTATTTATTTTTTTTTTC 3 2 2 47 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:8271413-8271438 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 13398241 13398262 NoAnnotation G6798.1 ATTCCCCCCTCCCACTTCCTA 2 2 2 7 1 0.301029996 0 0 0 2 0 0 2 chr17:13398241-13398262 NA NA NA NA NA NA chr17 - 13399088 13399121 3'utr HS3ST3A1 Ensembl G6799.1 CCACTTTTTCTTAAATTATTTCCCAGTTAGTAT 6 4 6 62 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr17:13399088-13399121 minimal NA NA NA UAUU minimal chr17 - 13399126 13399157 3'utr HS3ST3A1 Ensembl G6800.1 ATATCTATCCTTATATTTTTCTCCCTTTTTC 4 4 4 52 1 0.602059991 0 0 0 4 0 0 4 chr17:13399126-13399157 minimal NA NA NA UAUU minimal chr17 - 17748207 17748233 NoAnnotation G6810.1 TATATACTTAATTACACTAAATTATT 4 4 4 41 1 0.602059991 0 0 0 4 0 0 4 chr17:17748207-17748233 minimal NA NA NA UAUU minimal chr17 - 18570006 18570028 NoAnnotation G6811.1 ATATTATATTTTATCTAAATCT 4 4 4 41 1 0.602059991 0 0 0 4 0 0 4 chr17:18570006-18570028 minimal NA NA NA UAUU minimal chr17 - 19808114 19808140 3'utr AKAP10 Ensembl G6813.1 TACTTAAACCATATTATATTTAATTG 27 8 24 242 0.888888889 1.380211242 0 0.2 0.407407407 16 3 0 24 chr17:19808114-19808140 minimal NA NA AUUUA UAUU minimal chr17 - 19808307 19808329 3'utr AKAP10 Ensembl G6814.1 TATAAATATATAATTATTAATC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:19808307-19808329 minimal NA NA NA UAUU minimal chr17 - 19861210 19861230 intron AKAP10 Ensembl G6816.1 ATTTTTTTTCTCCTCTAACT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:19861210-19861230 NA NA NA NA NA NA chr17 - 20904753 20904779 3'utr USP22 Ensembl G6819.1 ATTTTTTTTTTAACTATTTAAAAACG 3 2 2 39 1 0.477121255 0 0 0 3 0 0 3 chr17:20904753-20904779 minimal NA NA AUUUA UAUU minimal chr17 - 21433336 21433358 3'utr C17orf51 Ensembl G6825.1 CCTCTTAAACCTATTTTTATTG 6 4 5 60 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr17:21433336-21433358 minimal NA NA NA UAUU minimal chr17 - 26722165 26722193 repeat SINE-AluJb RepeatMasker G6827.1 ATTAATAATATTATTTATTACTATTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:26722165-26722193 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 27188420 27188442 miRNA hsa-mir-451 miRBase G6831.1 AAACCGTTACCATTACTGAGTT 89 3 4 612 0.036697248 -0.720159303 0 0.5 0.908256881 10 85 20 4 chr17:27188420-27188442 NA NA NA NA NA NA chr17 - 27222323 27222358 repeat DNA-Charlie4a RepeatMasker G6833.1 ATTTACCACTAGATCTTACTATTTAATGTATTAAT 5 3 4 41 1 0.698970004 0 0 0 5 0 0 5 chr17:27222323-27222358 minimal NA NA AUUUA UAUU minimal chr17 - 27585021 27585046 3'utr NUFIP2 Ensembl G6835.1 TTCTTACCACCTCACTAATTTTTAT 4 3 4 37 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:27585021-27585046 minimal NA NA NA NA NA chr17 - 27587051 27587072 3'utr NUFIP2 Ensembl G6838.1 TAATTAATCAACAGAGCACCA 3 2 3 9 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:27587051-27587072 NA NA NA NA NA NA chr17 - 27589758 27589791 3'utr NUFIP2 Ensembl G6844.1 TAAACAAAACTTTTTTTTATACATAATATATAT 12 5 9 122 0.75 0.954242509 0 0.333333333 0.5 6 3 0 9 chr17:27589758-27589791 minimal NA NA NA NA NA chr17 - 27590372 27590413 3'utr NUFIP2 Ensembl G6845.1 CTTGTTAGCTTCTAATTATATCTTAATAAATATATTTTATT 66 14 57 785 0.826086957 1.153814864 0 0.272727273 0.536231884 32 9 3 57 chr17:27590372-27590413 minimal NA NA NA UAUU minimal chr17 - 27590901 27590926 3'utr NUFIP2 Ensembl G6848.1 AATACTTTATTTCTTTCCATTTATT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:27590901-27590926 minimal NA NA AUUUA UAUU minimal chr17 - 27613577 27613602 coding NUFIP2 Ensembl G6850.1 CCTTTTTATCTATCCTTCAAATATG 5 2 5 55 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr17:27613577-27613602 minimal NA NA NA NA NA chr17 - 28248070 28248097 intron SSH2 Ensembl G6855.1 CTAAACATTTTTTCAAATATTTACTAT 4 3 4 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:28248070-28248097 minimal NA NA AUUUA UAUU minimal chr17 - 30188665 30188688 3'utr UTP6 Ensembl G6862.1 ACTATTTAAAAATTTTTTTTCTT 5 2 4 59 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr17:30188665-30188688 minimal NA NA AUUUA UAUU minimal chr17 - 30202072 30202096 intron UTP6 Ensembl G6863.1 CTTCTATTTAATATCCTTTATTTG 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr17:30202072-30202096 minimal NA NA AUUUA UAUU minimal chr17 - 33420992 33421016 NoAnnotation G6865.1 ATTTATTTATATTTTAATTTATTT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr17:33420992-33421016 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 33478168 33478218 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6868.1 GAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAG 809 3 269 1802 0.120411817 -0.724367246 0.022829006 0.397810219 0.92614145 165 540 1425 269 chr17:33478168-33478218 NA NA NA NA NA NA chr17 - 33478230 33478275 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G6869.1 CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATAT 1871 7 49 6602 0.020710059 -1.005285596 0.039729501 0.387533875 0.904480135 226 1822 495 49 chr17:33478230-33478275 minimal NA NA AUUUA NA minimal chr17 - 33677921 33677945 3'utr SLFN11 Ensembl G6871.1 TTCTAAAACACTAATCTAAATATT 12 3 11 82 0.916666667 1.041392685 0 0.25 0.5 6 1 0 11 chr17:33677921-33677945 NA NA NA NA UAUU minimal chr17 - 33678490 33678512 3'utr SLFN11 Ensembl G6872.1 CTCTATAACACACCTAGTTAAG 3 2 3 15 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:33678490-33678512 NA NA NA NA NA NA chr17 - 34851647 34851674 3'utr MYO19 Ensembl G6874.1 AACAAAACTTTAGTATTTAATTAGTTG 31 4 30 270 0.967741935 1.477121255 0 0.454545455 0.806451613 6 1 0 30 chr17:34851647-34851674 minimal NA NA AUUUA UAUU minimal chr17 - 35875214 35875239 3'utr SYNRG Ensembl G6878.1 TTTTTACTTAATTCCATTATTTATA 6 3 5 74 0.625 0.22184875 0 0.166666667 0.375 5 1 2 5 chr17:35875214-35875239 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 35973118 35973149 3'utr DDX52 Ensembl G6880.1 AATTCAACTTATTTATTTCCTCTATTTGTAG 7 5 6 91 0.857142857 0.77815125 0 0 0 7 1 0 6 chr17:35973118-35973149 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 37563116 37563137 3'utr MED1 Ensembl G6888.1 TAATATTTTAACCCTTTATCT 6 4 6 56 1 0.77815125 0 0.25 0.5 3 0 0 6 chr17:37563116-37563137 minimal NA NA NA UAUU minimal chr17 - 37729614 37729642 NoAnnotation G6893.1 TCACTTATTTATTTTATTTTATTTTATT 5 2 2 98 0.4 0.301029996 0 0.333333333 0.6 2 3 0 2 chr17:37729614-37729642 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 37916935 37916958 3'utr IKZF3 Ensembl G6895.1 ATCACTATTATTCTCCTATTTCC 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:37916935-37916958 minimal NA NA NA UAUU minimal chr17 - 40006800 40006825 3'utr KLHL11 Ensembl G6905.1 TATTTAAATAATTTAGTATCTCACT 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:40006800-40006825 minimal NA NA AUUUA UAUU minimal chr17 - 40006993 40007025 3'utr KLHL11 Ensembl G6906.1 TCCCATCCCACCACTACCTTTTTCTCAATTTC 4 4 4 32 0.8 0.301029996 0 0 0 5 0 1 4 chr17:40006993-40007025 NA NA NA NA NA NA chr17 - 40277565 40277585 3'utr RAB5C Ensembl G6907.1 TCACTTTTTTAATATATATG 9 4 6 93 0.666666667 0.77815125 0 0.6 0.777777778 2 3 0 6 chr17:40277565-40277585 NA NA NA NA NA NA chr17 - 40724684 40724714 3'utr PSMC3IP Ensembl G6909.1 CAATATTTATTATAATTTAATTTTATATAA 13 5 10 161 0.714285714 0.698970004 0 0.181818182 0.357142857 9 3 1 10 chr17:40724684-40724714 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 41953520 41953544 3'utr MPP2 Ensembl G6916.1 AATATTTATTACAAATGTTAGAAT 2 2 2 17 0.666666667 0 0 0 0 3 0 1 2 chr17:41953520-41953544 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 42505074 42505096 intron GPATCH8 Ensembl G6920.1 CTTCATACCATTTAATTATTAT 4 2 2 41 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr17:42505074-42505096 minimal NA NA AUUUA UAUU minimal chr17 - 42542462 42542488 intron GPATCH8 Ensembl G6921.1 TTAAATATTTATATTATATATATTAT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr17:42542462-42542488 minimal NA NA AUUUA UAUU minimal chr17 - 42754975 42754998 repeat DNA-MER58C RepeatMasker G6924.1 TTTGCCAATCTCTGTTTTATACC 8 2 6 82 0.75 0.77815125 0 1 1 0 2 0 6 chr17:42754975-42754998 minimal NA NA NA NA NA chr17 - 42879412 42879441 3'utr GJC1 Ensembl G6926.1 CACACACTTTTAAAATCTATTTTTATTCT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr17:42879412-42879441 minimal NA NA NA UAUU minimal chr17 - 42881711 42881734 3'utr GJC1 Ensembl G6928.1 ACATATTTAAATCATTCTTGTTG 6 2 3 53 0.5 0.477121255 0 0.666666667 0.833333333 1 3 0 3 chr17:42881711-42881734 minimal NA NA AUUUA UAUU minimal chr17 - 42900418 42900444 intron GJC1 Ensembl G6929.1 CTTAATTTATTATTACTTAACTAATG 4 2 4 46 1 0.602059991 0 1 1 0 0 0 4 chr17:42900418-42900444 minimal NA NA AUUUA UAUU minimal chr17 - 42971742 42971766 intron EFTUD2 Ensembl G6930.1 TCTTTTATCTCACTCTTATTTATT 4 2 3 51 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr17:42971742-42971766 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 44247091 44247115 intron KIAA1267 Ensembl G6938.1 TACTATATTATAACATACTTAAAG 6 2 3 51 0.5 0.477121255 0 0.25 0.5 3 3 0 3 chr17:44247091-44247115 minimal NA NA NA UAUU minimal chr1 + 193056597 193056627 intron TROVE2 Ensembl G694.1 AAATTCCATTTATTAATACTTATATTATTT 6 4 5 69 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:193056597-193056627 minimal NA NA AUUUA UAUU minimal chr17 - 44840002 44840027 NoAnnotation G6940.1 TCTCTTTTTATAAATATTATTTATT 7 4 5 99 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr17:44840002-44840027 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 45195136 45195178 3'utr CDC27 Ensembl G6943.1 TTTATCTAATTTTTTAAAACTTACACTCTTAATATATTTATA 8 3 7 97 0.875 0.84509804 0 0 0 8 1 0 7 chr17:45195136-45195178 minimal NA NA AUUUA UAUU minimal chr17 - 45249935 45249965 intron CDC27 Ensembl G6946.1 CATTCACAATTTATAATTTATCTTAAATAT 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr17:45249935-45249965 minimal NA NA AUUUA NA minimal chr1 + 193058244 193058264 intron TROVE2 Ensembl G695.1 TATATCTTTTATATTAGATG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr1:193058244-193058264 minimal NA NA NA UAUU minimal chr17 - 46620085 46620111 3'utr HOXB2 Ensembl G6950.1 ATTATTTATTAAAATTCTTTAATAAT 15 6 15 176 1 1.176091259 0 0.444444444 0.666666667 5 0 0 15 chr17:46620085-46620111 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 46620124 46620146 3'utr HOXB2 Ensembl G6951.1 ACCTATTTTCCTCTTTTTTATG 6 4 6 72 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr17:46620124-46620146 minimal NA NA NA UAUU minimal chr17 - 46626572 46626596 3'utr HOXB3 Ensembl G6953.1 TATTATTTATCCCCCTACATTATG 3 2 2 23 0.75 0.176091259 0 0 0 4 0 1 3 chr17:46626572-46626596 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 46626627 46626650 3'utr HOXB3 Ensembl G6954.1 AACATTTTCATATATATTTATTG 21 7 20 232 0.952380952 1.301029996 0 0.454545455 0.714285714 6 1 0 20 chr17:46626627-46626650 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 46657266 46657288 miRNA hsa-mir-10a miRBase G6956.1 TACCCTGTAGATCCGAATTTGT 9 2 3 66 0.272727273 0 0 0.222222222 0.363636364 7 6 2 3 chr17:46657266-46657288 NA NA NA NA NA NA chr17 - 46673238 46673260 3'utr HOXB6 Ensembl G6958.1 TCTATTTTATTAATTTTCTATG 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:46673238-46673260 minimal NA NA NA UAUU minimal chr17 - 46698652 46698676 3'utr HOXB9 Ensembl G6960.1 ATTTCTTTGGGGGTGATTGTCTCG 4 2 4 39 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:46698652-46698676 NA NA NA NA NA NA chr17 - 47369881 47369903 intron ZNF652 Ensembl G6964.1 ACTATACTCTTTATTTTAGTCA 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr17:47369881-47369903 minimal NA NA NA UAUU minimal chr17 - 47370151 47370173 intron ZNF652 Ensembl G6965.1 ATATTTTTAACTTTTATTTATA 4 2 3 47 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr17:47370151-47370173 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 47373841 47373870 3'utr ZNF652 Ensembl G6966.1 CTTTTATTTATTTTTTTATTTTTAATATT 6 4 4 108 0.666666667 0.602059991 0 0 0 6 2 0 4 chr17:47373841-47373870 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 48772796 48772816 3'utr ANKRD40 Ensembl G6972.1 TTTCCTATAACATATTTATA 6 2 4 56 0.666666667 0.602059991 0 0.666666667 0.833333333 1 2 0 4 chr17:48772796-48772816 minimal NA NA AUUUA UAUU minimal chr17 - 49039600 49039626 3'utr SPAG9 Ensembl G6974.1 TTATTTCAGTATTTATTTCTATTATG 6 4 6 84 1 0.77815125 0 0.5 0.666666667 2 0 0 6 chr17:49039600-49039626 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 193094355 193094377 intron CDC73 Ensembl G698.1 AATTCATTTTACTTATCTATCT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:193094355-193094377 minimal NA NA NA NA NA chr17 - 53039256 53039284 3'utr COX11 Ensembl G6985.1 TACAACTTATTCTAAATATTTTCATTTT 6 2 3 66 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr17:53039256-53039284 minimal NA NA NA UAUU minimal chr17 - 53040523 53040547 intron COX11 Ensembl G6986.1 CTATTTTTCTTCACTATCTATACC 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:53040523-53040547 NA NA NA NA UAUU minimal chr17 - 56057552 56057572 intron VEZF1 Ensembl G6992.1 CATTTTCCTAATCCTTTATT 4 2 3 41 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr17:56057552-56057572 minimal NA NA NA UAUU minimal chr17 - 56078993 56079018 3'utr SRSF1 Ensembl G6993.1 ATTTCCCCCTCTTCTCCCTATTTAT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:56078993-56079018 minimal NA NA AUUUA UAUU minimal chr17 - 56081762 56081789 3'utr SRSF1 Ensembl G6995.1 TCTCACCTTCCCCTTTAAACTAATATT 11 4 6 92 0.545454545 0.77815125 0 0.375 0.545454545 5 5 0 6 chr17:56081762-56081789 NA NA NA NA UAUU minimal chr17 - 56082678 56082709 3'utr SRSF1 Ensembl G6997.1 TACAATCTTTTCATTTTTTAATTCAAACTGT 9 3 8 115 0.888888889 0.903089987 0 0.2 0.555555556 4 1 0 8 chr17:56082678-56082709 NA NA NA NA NA NA chr17 - 56494159 56494181 intron RNF43 Ensembl G7001.1 CACATTTTAAAAATCTTATTCT 7 4 6 58 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr17:56494159-56494181 minimal NA NA NA UAUU minimal chr17 - 57076017 57076040 3'utr TRIM37 Ensembl G7003.1 ATTATTTAAAATTCTTTCATTTT 3 2 3 37 1 0.477121255 0 0 0 3 0 0 3 chr17:57076017-57076040 minimal NA NA AUUUA UAUU minimal chr17 - 57152329 57152355 intron TRIM37 Ensembl G7004.1 ATTATTACTCTAAAATTTAGCATTTT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr17:57152329-57152355 minimal NA NA AUUUA UAUU minimal chr17 - 57188818 57188848 3'utr SKA2 Ensembl G7009.1 TCAATTTCCCTTTAAAATAACTATTTATTT 5 3 5 65 1 0.698970004 0 0.25 0.4 3 0 0 5 chr17:57188818-57188848 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 193127202 193127225 repeat Low_complexity-AT_rich RepeatMasker G701.1 TACTTATAATTTATTATATTTAT 8 5 8 98 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr1:193127202-193127225 minimal NA NA AUUUA UAUU minimal chr17 - 58233725 58233747 NoAnnotation G7019.1 TGGGCCCTCCTCCTCCTCCTCC 36 2 3 213 0.057692308 -0.753327667 0 0.363636364 0.865384615 7 33 16 3 chr17:58233725-58233747 NA NA NA NA NA NA chr17 - 58524546 58524568 3'utr APPBP2 Ensembl G7023.1 ATTTTAACAACTTTTTAATATG 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:58524546-58524568 NA NA NA NA NA NA chr17 - 59760540 59760566 3'utr BRIP1 Ensembl G7027.1 CATACTTTTTAAAAAACTATTTTATG 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:59760540-59760566 minimal NA NA NA UAUU minimal chr17 - 59862399 59862423 intron BRIP1 Ensembl G7030.1 AATCTTCTAAATACCTAACTTATT 4 2 3 35 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr17:59862399-59862423 minimal NA NA NA UAUU minimal chr17 - 59862834 59862862 intron BRIP1 Ensembl G7031.1 TATCTTTCTTATTTATCCTATTTCCCCA 4 3 3 54 0.75 0.477121255 0 0 0 4 1 0 3 chr17:59862834-59862862 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 59863321 59863351 intron BRIP1 Ensembl G7032.1 AACCATAATTAACTTTTTATTTATTTTTCC 4 3 4 52 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr17:59863321-59863351 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 60020511 60020535 3'utr MED13 Ensembl G7036.1 TTTTTAATATACATTCTTATTTTG 3 2 2 40 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:60020511-60020535 minimal NA NA NA UAUU minimal chr17 - 60020830 60020850 3'utr MED13 Ensembl G7037.1 ATTAAAATATTCTCCTTTCG 4 4 4 32 1 0.602059991 0 0 0 4 0 0 4 chr17:60020830-60020850 NA NA NA NA UAUU minimal chr17 - 60020889 60020919 3'utr MED13 Ensembl G7038.1 CTCTTACTACTTAGTCAACTATCCTCAGCT 5 2 5 46 1 0.698970004 0 0.25 0.4 3 0 0 5 chr17:60020889-60020919 NA NA NA NA NA NA chr17 - 60021655 60021679 3'utr MED13 Ensembl G7039.1 ATCCTTTTTATACACTTAATAGTG 4 3 4 37 1 0.602059991 0 0 0 4 0 0 4 chr17:60021655-60021679 minimal NA NA NA NA NA chr17 - 60021777 60021797 3'utr MED13 Ensembl G7040.1 CTAATACACCACACATTATG 3 2 3 12 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:60021777-60021797 minimal NA NA NA NA NA chr17 - 60022463 60022488 3'utr MED13 Ensembl G7042.1 CCTTTTTTATTTATTTAATTTTCTT 9 4 6 135 0.666666667 0.77815125 0 0.285714286 0.444444444 5 3 0 6 chr17:60022463-60022488 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 60022893 60022916 3'utr MED13 Ensembl G7043.1 TTTAGGGCTATGACTAATATTTC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:60022893-60022916 NA NA NA NA UAUU minimal chr17 - 60023330 60023356 3'utr MED13 Ensembl G7046.1 TCTTATATTTCTTAACCTCTTTTATA 8 2 5 107 0.625 0.698970004 0 0.333333333 0.5 4 3 0 5 chr17:60023330-60023356 minimal NA NA NA UAUU minimal chr17 - 60023375 60023400 3'utr MED13 Ensembl G7047.1 CATCTCTTCTCTTATTTATTGTAAG 81 11 80 893 0.952380952 1.301029996 0 0.705882353 0.94047619 5 1 3 80 chr17:60023375-60023400 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 193220005 193220028 3'utr CDC73 Ensembl G705.1 CTTACAACTATTTTTTTAATATT 7 4 5 79 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr1:193220005-193220028 NA NA NA NA UAUU minimal chr17 - 60079383 60079404 intron MED13 Ensembl G7053.1 TAAATATCTATTATTATTTTT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr17:60079383-60079404 minimal NA NA NA UAUU minimal chr17 - 60081769 60081790 repeat LINE-L2a RepeatMasker G7055.1 ATTTTCCTCACCATTTTATCT 6 4 4 59 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr17:60081769-60081790 minimal NA NA NA NA NA chr1 + 193221841 193221865 3'utr CDC73 Ensembl G706.1 TAATTAATTTCATTCCATTATTTT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr1:193221841-193221865 minimal NA NA NA UAUU minimal chr17 - 62939625 62939654 NoAnnotation G7064.1 TTCTATAATATTCCTTAATTATTTATTAT 4 3 3 57 0.6 0.176091259 0 0 0 5 1 1 3 chr17:62939625-62939654 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 63009608 63009638 3'utr GNA13 Ensembl G7068.1 CCTTTCTCATATTTAATTATCATGTAGTTT 10 4 10 103 1 1 0 0.166666667 0.5 5 0 0 10 chr17:63009608-63009638 minimal NA NA AUUUA UAUU minimal chr1 + 193222626 193222649 repeat Low_complexity-AT_rich RepeatMasker G707.1 CAATTTTTAATTATTTATTTAAT 6 3 3 78 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr1:193222626-193222649 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr17 - 65073976 65074000 3'utr HELZ Ensembl G7075.1 CATTTACATTTATTCAATAATATT 3 3 3 31 0.75 0.176091259 0 0 0 4 0 1 3 chr17:65073976-65074000 minimal NA NA AUUUA UAUU minimal chr17 - 65147009 65147032 repeat DNA-MER58A RepeatMasker G7076.1 CTCATTTATTTACCTATTTATTG 5 2 4 59 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr17:65147009-65147032 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr17 - 65334480 65334527 3'utr PSMD12 Ensembl G7079.1 TATTTACCAATTTATTTTCTTAGTATTACAAAATAATTCATTAGCAT 10 2 9 124 0.9 0.954242509 0 0.285714286 0.5 5 1 0 9 chr17:65334480-65334527 minimal NA NA AUUUA UAUU minimal chr17 - 65987706 65987734 3'utr C17orf58 Ensembl G7081.1 TTTTTAAATTATTTTAATTTAATATTCT 10 6 9 145 0.9 0.954242509 0 0.111111111 0.2 8 1 0 9 chr17:65987706-65987734 minimal NA NA AUUUA UAUU minimal chr17 - 73314216 73314236 3'utr GRB2 Ensembl G7088.1 TACTTAATCCTTTAACTCTG 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr17:73314216-73314236 NA NA NA NA NA NA chr17 - 73773915 73773946 3'utr H3F3B Ensembl G7092.1 CAAACACTAACTGGGGGATTTTATTTATAAG 4 3 3 36 0.75 0.477121255 0 0 0 4 1 0 3 chr17:73773915-73773946 UUAUUUAU NA NA AUUUA UAUU minimal chr17 - 73774114 73774155 3'utr H3F3B Ensembl G7093.1 CTATTTTATATATTGTAGTATCAACATTTTTAAATTAAATG 139 14 126 1430 0.9 1.799340549 0 0.523809524 0.857142857 20 13 1 126 chr17:73774114-73774155 minimal NA NA NA UAUU minimal chr17 - 74714552 74714575 3'utr JMJD6 Ensembl G7095.1 AAAATCCTTTACATTATTTAATA 4 3 3 36 0.75 0.477121255 0 0 0 4 1 0 3 chr17:74714552-74714575 minimal NA NA AUUUA UAUU minimal chr17 - 76793174 76793197 3'utr USP36 Ensembl G7102.1 ATTCTCCATTTATTTTACTACTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr17:76793174-76793197 minimal NA NA AUUUA UAUU minimal chr17 - 78440840 78440862 3'utr NPTX1 Ensembl G7105.1 TATCTCACTTTTTCATTATTTG 6 3 6 71 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr17:78440840-78440862 minimal NA NA NA UAUU minimal chr17 - 79477119 79477158 3'utr ACTG1 Ensembl G7109.1 TAAATGTATTCATTCTTAATTTATGTAAGGTTTTTTTTG 13 6 11 142 0.846153846 1.041392685 0 0.181818182 0.307692308 9 2 0 11 chr17:79477119-79477158 minimal NA NA AUUUA UAUU minimal chr1 + 195009781 195009801 NoAnnotation G711.1 TCTAACCTTTTATCTATTTT 4 2 4 41 1 0.602059991 0 0.5 0.75 1 0 0 4 chr1:195009781-195009801 minimal NA NA NA UAUU minimal chr17 - 79836485 79836521 NoAnnotation G7113.1 CATATATTCTATTTAGTATATTAATCCTTCATAAAC 6 4 6 61 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr17:79836485-79836521 minimal NA NA AUUUA UAUU minimal chr1 + 195790733 195790761 repeat Simple_repeat-(ATG)n RepeatMasker G712.1 TGATGATGATGATGATGATGATGAGTGA 229 2 196 1486 0.855895197 2.292256071 0 0.7 0.986899563 3 33 0 196 chr1:195790733-195790761 NA NA NA NA NA NA chr18 + 198156 198177 intron USP14 Ensembl G7120.1 ACTATACTCATACCTTATTAG 3 2 3 21 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr18:198156-198177 minimal NA NA NA UAUU minimal chr18 + 211281 211304 coding USP14 Ensembl G7121.1 TAATCTTCATTTTAGTATTTATG 53 4 53 617 1 1.72427587 0.867924528 0.6 0.924528302 4 0 0 53 chr18:211281-211304 minimal NA NA AUUUA UAUU minimal chr18 + 211641 211663 3'utr USP14 Ensembl G7122.1 CACACCTATTACCTATTATTTG 9 4 8 72 0.888888889 0.903089987 0.222222222 0.4 0.666666667 3 1 0 8 chr18:211641-211663 minimal NA NA NA UAUU minimal chr18 + 211711 211731 3'utr USP14 Ensembl G7123.1 CCTTATCTAACAAACATTTT 3 2 3 21 1 0.477121255 0 0 0 3 0 0 3 chr18:211711-211731 minimal NA NA NA NA NA chr18 + 673376 673398 3'utr TYMS Ensembl G7124.1 CTATTCCCTCAAATCTGAGGGA 4 2 2 22 0.5 0.301029996 0.25 0.333333333 0.5 2 2 0 2 chr18:673376-673398 NA NA NA NA UAUU minimal chr18 + 3458005 3458034 repeat Low_complexity-AT_rich RepeatMasker G7130.1 CATTATTTTATATATTTTTTATTAATATT 17 10 16 255 0.941176471 1.204119983 0 0.142857143 0.294117647 12 1 0 16 chr18:3458005-3458034 minimal NA NA NA UAUU minimal chr18 + 8638573 8638593 3'utr RAB12 Ensembl G7136.1 TCCTTATTAATTATATTATG 5 2 5 50 1 0.698970004 1 1 1 0 0 0 5 chr18:8638573-8638593 minimal NA NA NA UAUU minimal chr18 + 9177661 9177692 intron ANKRD12 Ensembl G7139.1 TCAAACATTAGAACTTATTTCTTCTATTTAT 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr18:9177661-9177692 minimal NA NA AUUUA UAUU minimal chr18 + 9281623 9281647 3'utr ANKRD12 Ensembl G7140.1 TCTTCCTTTTTAATAACTTATTTT 6 3 5 79 0.833333333 0.698970004 0 0.25 0.5 3 1 0 5 chr18:9281623-9281647 minimal NA NA NA UAUU minimal chr18 + 9954537 9954563 3'utr VAPA Ensembl G7147.1 TTATTTTAATAATCCCTTTAAATTTT 10 4 9 113 0.9 0.954242509 0 0.111111111 0.2 8 1 0 9 chr18:9954537-9954563 minimal NA NA NA UAUU minimal chr18 + 9955206 9955228 3'utr VAPA Ensembl G7148.1 TCTTACTACTTTTCATAATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr18:9955206-9955228 NA NA NA NA UAUU minimal chr18 + 9955989 9956011 3'utr VAPA Ensembl G7149.1 CTCTTATATAATCAATATTATT 5 4 4 50 0.8 0.602059991 0.4 0 0 5 1 0 4 chr18:9955989-9956011 minimal NA NA NA UAUU minimal chr18 + 12985669 12985690 repeat Low_complexity-AT_rich RepeatMasker G7157.1 AACTTTTATAATTTTAATTTG 4 3 4 44 1 0.602059991 1 0 0 4 0 0 4 chr18:12985669-12985690 minimal NA NA NA NA NA chr18 + 12986578 12986602 repeat Low_complexity-AT_rich RepeatMasker G7159.1 TAACATTTATATATATTTTTTAAC 5 2 5 57 1 0.698970004 0 0.25 0.4 3 0 0 5 chr18:12986578-12986602 minimal NA NA AUUUA UAUU minimal chr18 + 13057918 13057944 repeat Low_complexity-AT_rich RepeatMasker G7161.1 CATTTTCCATCATTTATTATTTATAT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr18:13057918-13057944 UUAUUUAU NA NA AUUUA UAUU minimal chr18 + 13759581 13759609 repeat Low_complexity-T-rich RepeatMasker G7162.1 TTATACTTATTTAAAATTTAATTTTATT 4 3 4 57 0.8 0.301029996 0 0 0 5 0 1 4 chr18:13759581-13759609 minimal NA NA AUUUA UAUU minimal chr18 + 19213188 19213213 NoAnnotation G7167.1 TTTCTTTTAATCTATCATAATTATG 10 2 10 116 1 1 0.3 0.6 0.8 2 0 0 10 chr18:19213188-19213213 minimal NA NA NA NA NA chr18 + 19781578 19781599 3'utr GATA6 Ensembl G7171.1 CTTCTTTTACAACTACATCCC 4 2 2 28 0.75 0.477121255 0 0 0 4 1 0 3 chr18:19781578-19781599 NA NA NA NA NA NA chr1 + 198290371 198290392 3'utr NEK7 Ensembl G719.1 TTTCTGAAGGGTAATTTTATT 4 2 2 42 0.75 0.477121255 0 0 0 4 1 0 3 chr1:198290371-198290392 minimal NA NA NA UAUU minimal chr18 + 32261561 32261582 intron DTNA Ensembl G7193.1 TCATTTATTTATTAATTTAGT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:32261561-32261582 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 + 32721558 32721585 3'utr MAPRE2 Ensembl G7198.1 CATTCCTTATTTTTTAACTAATATTTG 17 7 16 219 0.941176471 1.204119983 0.058823529 0.214285714 0.352941176 11 1 0 16 chr18:32721558-32721585 minimal NA NA NA UAUU minimal chr1 + 198291024 198291050 3'utr NEK7 Ensembl G721.1 CTATATCTATTCTAAACCTTATTTAG 10 3 8 109 0.8 0.903089987 0.4 0.333333333 0.6 4 2 0 8 chr1:198291024-198291050 minimal NA NA AUUUA UAUU minimal chr18 + 43845039 43845059 3'utr C18orf25 Ensembl G7215.1 ACCTTCACATTTTACTTTAG 4 3 4 32 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr18:43845039-43845059 NA NA NA NA NA NA chr18 + 43846029 43846051 3'utr C18orf25 Ensembl G7216.1 CATTCTTTTTTATTCAATTTAT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr18:43846029-43846051 minimal NA NA AUUUA UAUU minimal chr18 + 43846071 43846094 3'utr C18orf25 Ensembl G7217.1 CAATCAAACATCCCATAAACTTT 3 2 3 15 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:43846071-43846094 NA NA NA NA NA NA chr18 + 47918665 47918688 repeat Low_complexity-AT_rich RepeatMasker G7226.1 CTATTTCTATAATTTTCTTATAT 5 3 4 65 0.8 0.602059991 0 0 0 5 1 0 4 chr18:47918665-47918688 minimal NA NA NA UAUU minimal chr18 + 47933646 47933667 repeat LTR-HERVS71-int RepeatMasker G7227.1 ATTAATTCTTTTTATTTATCT 7 3 4 93 0.571428571 0.602059991 0 0.4 0.571428571 3 3 0 4 chr18:47933646-47933667 UUAUUUAU NA NA AUUUA UAUU minimal chr18 + 48474088 48474116 3'utr ME2 Ensembl G7229.1 AAATATTAAAAATTTACCCTATTTATTT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:48474088-48474116 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 200827788 200827809 3'utr CAMSAP1L1 Ensembl G723.1 TATTTACAACTCTATTTATTA 14 5 10 144 0.714285714 1 0 0.5 0.714285714 4 4 0 10 chr1:200827788-200827809 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 200828199 200828221 3'utr CAMSAP1L1 Ensembl G724.1 CTTCACATTATTTTACTTATAT 8 5 8 88 1 0.903089987 0.75 0.6 0.75 2 0 0 8 chr1:200828199-200828221 minimal NA NA NA UAUU minimal chr18 + 51905120 51905143 3'utr C18orf54 Ensembl G7240.1 AAATTTTCATAAATTTAATATTT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:51905120-51905143 minimal NA NA AUUUA UAUU minimal chr18 + 51906560 51906582 repeat Low_complexity-AT_rich RepeatMasker G7241.1 ATTTATTTATAATTTTAATATC 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr18:51906560-51906582 UUAUUUAU NA NA AUUUA UAUU minimal chr18 + 55150709 55150738 3'utr ONECUT2 Ensembl G7244.1 TAATTAACTTATTTAAATTAGTTCCTAGT 10 2 10 107 1 1 0.2 0.285714286 0.5 5 0 0 10 chr18:55150709-55150738 minimal NA NA AUUUA UAUU minimal chr18 + 55151075 55151108 3'utr ONECUT2 Ensembl G7247.1 CCTTCATATTGTAACTTATTTATTTAACTTATT 11 5 10 128 0.909090909 1 0 0.222222222 0.363636364 7 1 0 10 chr18:55151075-55151108 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 + 57571038 57571069 3'utr PMAIP1 Ensembl G7250.1 TATACACATACTTACATACTTATATGGGTAT 43 7 41 335 0.931818182 1.311753861 0.090909091 0.36 0.636363636 16 2 1 41 chr18:57571038-57571069 minimal NA NA NA NA NA chr18 + 57571116 57571153 3'utr PMAIP1 Ensembl G7251.1 TCTCAAGTAAGTTTCATTTTTTTTATCTGGGCTATAT 20 7 17 246 0.85 1.230448921 0 0.357142857 0.55 9 3 0 17 chr18:57571116-57571153 minimal NA NA NA NA NA chr18 + 60245512 60245533 3'utr ZCCHC2 Ensembl G7255.1 ACCACATTATTAAATTAATTG 3 2 3 21 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr18:60245512-60245533 minimal NA NA NA UAUU minimal chr18 + 72451447 72451470 repeat Simple_repeat-(TA)n RepeatMasker G7268.1 CTTTCCTTTTATTTATATTTATA 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr18:72451447-72451470 UUAUUUAU NA NA AUUUA UAUU minimal chr18 + 72484552 72484575 intron ZNF407 Ensembl G7269.1 CTTTTTATCTTTTATTTCATATT 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr18:72484552-72484575 minimal NA NA NA UAUU minimal chr18 + 73001088 73001110 3'utr TSHZ1 Ensembl G7271.1 ACACAAAACTTATTTAATAATT 4 3 4 27 1 0.602059991 0 0 0 4 0 0 4 chr18:73001088-73001110 minimal NA NA AUUUA UAUU minimal chr18 + 77469267 77469289 repeat Low_complexity-AT_rich RepeatMasker G7274.1 ATAACTTATTTTTAAATTATCT 4 4 4 43 1 0.602059991 0 0 0 4 0 0 4 chr18:77469267-77469289 minimal NA NA NA UAUU minimal chr18 + 77772975 77773002 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G7276.1 ACGACCTGCTTCTGGGTCGGGGTTTCG 193 4 6 1534 0.025751073 -0.834632606 0.91416309 0.358974359 0.892703863 25 187 40 6 chr18:77772975-77773002 NA NA NA NA NA NA chr18 + 77897389 77897411 3'utr ADNP2 Ensembl G7277.1 TTATTTTACAAATAAATTTATT 4 2 2 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr18:77897389-77897411 minimal NA NA AUUUA UAUU minimal chr18 - 5289825 5289848 3'utr ZFP161 Ensembl G7288.1 CTTACTTAAATTAATAAATTTAA 6 3 6 52 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr18:5289825-5289848 minimal NA NA AUUUA NA minimal chr1 + 203276665 203276686 repeat Low_complexity-AT_rich RepeatMasker G730.1 CTATTTATATATATTATTTTT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr1:203276665-203276686 minimal NA NA AUUUA UAUU minimal chr18 - 14123721 14123744 intron ZNF519 Ensembl G7304.1 TACCACTTATTTATTTATTTATG 3 2 3 36 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr18:14123721-14123744 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 203769636 203769679 3'utr ZBED6 Ensembl G731.1 TATCTTAATAGCTGTAGTTGTTAAATATAATCATTATCTTTAT 27 5 27 271 1 1.431363764 0.037037037 0.307692308 0.666666667 9 0 0 27 chr1:203769636-203769679 minimal NA NA NA NA NA chr18 - 24124960 24124981 intron KCTD1 Ensembl G7310.1 TCATTATCTTTTATTTACCTG 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr18:24124960-24124981 minimal NA NA AUUUA UAUU minimal chr18 - 28593535 28593564 intron DSC3 Ensembl G7313.1 CTCTTCTTATCTATTAACTATTTATTTAT 4 2 4 58 1 0.602059991 0 0.5 0.75 1 0 0 4 chr18:28593535-28593564 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr18 - 28646776 28646797 3'utr DSC2 Ensembl G7316.1 TAACTATTTTATAACTTAGAT 4 2 4 34 1 0.602059991 0 0.5 0.75 1 0 0 4 chr18:28646776-28646797 minimal NA NA NA UAUU minimal chr18 - 32831138 32831168 3'utr ZSCAN30 Ensembl G7325.1 TTTATTTTTCCCAATCCTAGTATTTTTAGT 3 2 2 44 0.666666667 0.301029996 0 0 0 3 1 0 2 chr18:32831138-32831168 minimal NA NA NA UAUU minimal chr18 - 32912707 32912729 repeat LTR-MLT1K RepeatMasker G7326.1 TAACACAACCTTTATTTATTTG 3 2 2 26 0.666666667 0.301029996 0 0 0 3 1 0 2 chr18:32912707-32912729 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 - 32913156 32913179 3'utr ZNF24 Ensembl G7327.1 CCATTATTTATTCCCTTAATTTT 4 3 3 47 0.75 0.477121255 0 0 0 4 1 0 3 chr18:32913156-32913179 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 - 32915743 32915764 3'utr ZNF24 Ensembl G7328.1 TTTATTAACCTATCACAATTG 4 3 4 28 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr18:32915743-32915764 minimal NA NA NA UAUU minimal chr18 - 32917043 32917066 3'utr ZNF24 Ensembl G7329.1 AAAAATCTTCACTCACCATTATG 3 2 3 18 1 0.477121255 0 0 0 3 0 0 3 chr18:32917043-32917066 minimal NA NA NA NA NA chr1 + 203770415 203770441 5'utr ZC3H11A Ensembl G733.1 TAATCTTTTTAAAAACATACTTAATG 3 2 3 26 0.75 0.176091259 1 0.333333333 0.5 2 0 1 3 chr1:203770415-203770441 NA NA NA NA NA NA chr18 - 32920564 32920589 coding ZNF24 Ensembl G7330.1 ATTCAATACTTATCATCCCAACTCC 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:32920564-32920589 minimal NA NA NA NA NA chr18 - 34359990 34360016 NoAnnotation G7334.1 CATTAAACTCTATTTATTTAGTATTT 16 2 16 177 1 1.204119983 0 0.714285714 0.875 2 0 0 16 chr18:34359990-34360016 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr18 - 36825806 36825832 lincRNA AC016205.1 Ensembl G7336.1 TATACCTTTATTTTTCATATTTATTG 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr18:36825806-36825832 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 203770830 203770855 5'utr ZC3H11A Ensembl G734.1 CCTAGAAATTATGTAGTATTTATTA 13 6 12 122 0.923076923 1.079181246 0 0.3 0.461538462 7 1 0 12 chr1:203770830-203770855 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr18 - 37267708 37267733 lincRNA AC016205.1 Ensembl G7341.1 AAAAAACTCAATTTTATTATTTATT 4 2 4 38 1 0.602059991 0 0.5 0.75 1 0 0 4 chr18:37267708-37267733 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 - 37344059 37344079 lincRNA AC016205.1 Ensembl G7342.1 CCTATTTAGAATTAATATTT 4 2 4 36 1 0.602059991 0 0.5 0.75 1 0 0 4 chr18:37344059-37344079 minimal NA NA AUUUA UAUU minimal chr18 - 43509492 43509521 intron EPG5 Ensembl G7351.1 ATACACTATTACATTTTTCTATTTTATTT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr18:43509492-43509521 minimal NA NA NA UAUU minimal chr18 - 44395990 44396011 intron PIAS2 Ensembl G7354.1 ACCTAAAAATTTTATTTATTG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:44395990-44396011 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 - 44603063 44603089 NoAnnotation G7355.1 CCCATAACTATAATTCCTTTAACATA 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:44603063-44603089 NA NA NA NA NA NA chr1 + 203771390 203771410 5'utr ZC3H11A Ensembl G736.1 TCTTTATTTTGTGGGCTGGG 12 4 12 108 1 1.079181246 0.416666667 1 1 0 0 0 12 chr1:203771390-203771410 minimal NA NA NA UAUU minimal chr18 - 45391618 45391640 intron SMAD2 Ensembl G7360.1 CAATATTACTTTTTATAATATT 4 2 4 44 1 0.602059991 0 0.5 0.75 1 0 0 4 chr18:45391618-45391640 minimal NA NA NA UAUU minimal chr18 - 46814668 46814696 intron DYM Ensembl G7364.1 AATTAAATATATTTTCTAATTATTTATT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr18:46814668-46814696 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr18 - 47008529 47008558 3'utr C18orf32 Ensembl G7366.1 TATTTAAAATGTAGTTAGTTATATTTAAT 18 3 15 213 0.833333333 1.176091259 0 0.307692308 0.5 9 3 0 15 chr18:47008529-47008558 minimal NA NA AUUUA UAUU minimal chr18 - 48701119 48701141 3'utr MEX3C Ensembl G7374.1 CTAATTTTACTACACTCTTTTG 5 4 5 49 1 0.698970004 0 0 0 5 0 0 5 chr18:48701119-48701141 NA NA NA NA NA NA chr18 - 48701459 48701484 3'utr MEX3C Ensembl G7376.1 ACAAATTTTATTTTTTATTTCCACT 4 2 2 41 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr18:48701459-48701484 minimal NA NA NA UAUU minimal chr18 - 54249289 54249312 NoAnnotation G7385.1 CCTAATATATTTTATTAATATTT 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:54249289-54249312 minimal NA NA NA UAUU minimal chr18 - 55268307 55268334 3'utr NARS Ensembl G7389.1 TTATTAATCTTTTCTAACTCTGCTTAG 5 3 5 57 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr18:55268307-55268334 minimal NA NA NA UAUU minimal chr1 + 203773151 203773176 intron ZC3H11A Ensembl G739.1 TAATTTCTTTAATCCTCTATTTATT 3 2 2 43 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:203773151-203773176 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr18 - 55268534 55268563 3'utr NARS Ensembl G7391.1 TATGTATAATTCAACAATTTTAGATTATG 19 2 19 173 0.95 0.977723605 0 0.25 0.7 6 0 1 19 chr18:55268534-55268563 minimal NA NA NA NA NA chr18 - 56998215 56998240 3'utr LMAN1 Ensembl G7395.1 TCTAAATTATTAATTTTCTTAATAA 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr18:56998215-56998240 minimal NA NA NA UAUU minimal chr1 + 203822415 203822437 3'utr ZC3H11A Ensembl G740.1 TTTGGTGGCCTTTAACCACCTG 3 2 3 20 1 0.477121255 0.666666667 0 0 3 0 0 3 chr1:203822415-203822437 NA NA NA NA NA NA chr18 - 67846360 67846387 intron RTTN Ensembl G7413.1 TTCTACTTTCGGTTTAAATATTTATTG 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr18:67846360-67846387 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr18 - 72913288 72913314 3'utr ZADH2 Ensembl G7418.1 AATTACTCAAATCAATTTATTTTTAG 8 4 6 78 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr18:72913288-72913314 minimal NA NA AUUUA UAUU minimal chr19 + 811484 811511 3'utr PTBP1 Ensembl G7423.1 ACCAAATATTCTAATCTTTTTTCATTT 32 9 28 313 0.875 1.447158031 0 0.291666667 0.46875 17 4 0 28 chr19:811484-811511 NA NA NA NA UAUU minimal chr19 + 2273294 2273321 repeat Low_complexity-AT_rich RepeatMasker G7428.1 CTTTAATTCTAAATAAAAATTTATATT 6 2 4 64 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr19:2273294-2273321 minimal NA NA AUUUA UAUU minimal chr19 + 2478200 2478225 3'utr GADD45B Ensembl G7430.1 ATATCTATATTTTTATTTCTACTAT 11 6 9 146 0.818181818 0.954242509 0.272727273 0.1 0.181818182 9 2 0 9 chr19:2478200-2478225 minimal NA NA NA UAUU minimal chr19 + 3123753 3123778 NoAnnotation G7432.1 ACAATTTCAACCTTAATCTATTTAA 11 4 10 89 0.909090909 1 0 0.222222222 0.363636364 7 1 0 10 chr19:3123753-3123778 minimal NA NA AUUUA UAUU minimal chr19 + 7086268 7086290 3'utr ZNF557 Ensembl G7437.1 ATATATTTTTTTCTAATTTAAT 5 4 5 63 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr19:7086268-7086290 minimal NA NA AUUUA UAUU minimal chr1 + 204518843 204518863 3'utr MDM4 Ensembl G744.1 TTCACTTACCACATTATTTG 5 2 4 41 0.8 0.602059991 1 0.666666667 0.8 1 1 0 4 chr1:204518843-204518863 minimal NA NA NA UAUU minimal chr19 + 7979031 7979066 3'utr MAP2K7 Ensembl G7440.1 CTGCCTGGTTTTATTTTTATTTAACTTTATTTTCT 14 5 11 224 0.785714286 1.041392685 0 0.076923077 0.142857143 12 3 0 11 chr19:7979031-7979066 minimal NA NA AUUUA UAUU minimal chr19 + 10407357 10407381 repeat Simple_repeat-(TTTA)n RepeatMasker G7448.1 CTTTATTTATTTACTTATTCATTT 2 2 2 30 1 0.301029996 0.5 0 0 2 0 0 2 chr19:10407357-10407381 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 10663764 10663793 3'utr ATG4D Ensembl G7449.1 ATACAACACTATTTATTTTTTTATTTATG 48 9 35 629 0.714285714 1.243038049 0.204081633 0.285714286 0.489795918 25 13 1 35 chr19:10663764-10663793 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 204518863 204518893 3'utr MDM4 Ensembl G745.1 AAAATCAATCCTTTATTTAATTTTATTTCC 8 3 7 73 0.777777778 0.544068044 0 0.285714286 0.444444444 5 1 1 7 chr1:204518863-204518893 minimal NA NA AUUUA UAUU minimal chr19 + 11040888 11040908 3'utr C19orf52 Ensembl G7454.1 TAATTAACTAAATAAAATTT 7 4 6 50 0.857142857 0.77815125 0.428571429 0.166666667 0.285714286 5 1 0 6 chr19:11040888-11040908 NA NA NA NA NA NA chr19 + 13942894 13942915 3'utr ZSWIM4 Ensembl G7464.1 TAACTTTTTTTCTATTTATTG 6 3 5 79 0.833333333 0.698970004 1 0.25 0.5 3 1 0 5 chr19:13942894-13942915 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 16213719 16213742 lincRNA AC020911.1 Ensembl G7469.1 AATAAAATCCACACTTTAGATTC 7 2 5 41 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr19:16213719-16213742 NA NA NA NA NA NA chr19 + 16614366 16614389 lincRNA AC020911.1 Ensembl G7470.1 CTATCTTTATTTATTTATTTAAT 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:16614366-16614389 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 17443041 17443069 NoAnnotation G7474.1 CCTTATTTTTTACTTTATTTATTTATTT 44 13 39 746 0.847826087 1.113943352 0.065217391 0.379310345 0.608695652 18 5 2 39 chr19:17443041-17443069 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 18781261 18781287 3'utr KLHL26 Ensembl G7479.1 TCTCCTAATATTTCCCTTTATTTAAT 13 4 11 148 0.846153846 1.041392685 0 0.2 0.384615385 8 2 0 11 chr19:18781261-18781287 minimal NA NA AUUUA UAUU minimal chr19 + 19617196 19617223 3'utr GATAD2A Ensembl G7483.1 TTTATTTTATTAAATTTTTTCCTTTTT 4 2 4 70 1 0.602059991 0 0 0 4 0 0 4 chr19:19617196-19617223 minimal NA NA NA UAUU minimal chr19 + 20005111 20005132 NoAnnotation G7488.1 CTATTTTATTCCTATTATATT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:20005111-20005132 minimal NA NA NA UAUU minimal chr19 + 21136598 21136651 repeat Low_complexity-AT_rich RepeatMasker G7491.1 AAAAACATTTTTAATATTAGTTAAAATTAGTAATATATTATTTTACTAATTAT 5 3 5 48 1 0.698970004 0.2 0 0 5 0 0 5 chr19:21136598-21136651 minimal NA NA NA UAUU minimal chr19 + 21223504 21223531 intron ZNF430 Ensembl G7493.1 ATCTTTTATCTAAATTTTCTATTTATT 3 2 2 46 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:21223504-21223531 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 21226868 21226888 intron ZNF430 Ensembl G7494.1 AATACCCCTTATTTATTTTT 5 3 5 50 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr19:21226868-21226888 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 21307516 21307537 NoAnnotation G7499.1 ACTATAATTACTTATTATTTG 4 2 4 40 0.8 0.301029996 1 0.666666667 0.8 1 0 1 4 chr19:21307516-21307537 minimal NA NA NA UAUU minimal chr1 + 206634814 206634838 3'utr SRGAP2 Ensembl G750.1 TTATTAAAATCTTCCTATTTAACT 8 2 5 79 0.625 0.698970004 0 0.333333333 0.5 4 3 0 5 chr1:206634814-206634838 minimal NA NA AUUUA UAUU minimal chr19 + 21308114 21308135 NoAnnotation G7502.1 TCTTCATTTACTCATTAGATG 4 2 3 37 0.75 0.477121255 1 0.333333333 0.5 2 1 0 3 chr19:21308114-21308135 minimal NA NA AUUUA NA minimal chr19 + 21371953 21371976 NoAnnotation G7506.1 ATATATATAGTTAAATTATTATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr19:21371953-21371976 minimal NA NA NA UAUU minimal chr19 + 24312076 24312100 repeat Low_complexity-AT_rich RepeatMasker G7519.1 TCTATTTTTAAATTATAAATTATG 4 3 4 48 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr19:24312076-24312100 minimal NA NA NA UAUU minimal chr19 + 24312432 24312457 3'utr ZNF254 Ensembl G7521.1 CATACTCTATATAATAATCACATTA 9 4 8 65 0.888888889 0.903089987 0.222222222 0.285714286 0.444444444 5 1 0 8 chr19:24312432-24312457 NA NA NA NA NA NA chr19 + 28300810 28300831 NoAnnotation G7525.1 ATTATTTAATTATTTTCTATT 4 3 4 52 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr19:28300810-28300831 minimal NA NA AUUUA UAUU minimal chr19 + 28301930 28301956 NoAnnotation G7526.1 TTTCATCTTCTTTAATTTCTTTAATT 4 3 3 60 0.75 0.477121255 0 0 0 4 1 0 3 chr19:28301930-28301956 NA NA NA NA NA NA chr19 + 30315173 30315196 3'utr CCNE1 Ensembl G7527.1 CTATATCTATCCATTTTTTAATA 5 3 5 54 0.833333333 0.397940009 0 0.2 0.333333333 4 0 1 5 chr19:30315173-30315196 NA NA NA NA NA NA chr19 + 32875229 32875250 3'utr ZNF507 Ensembl G7535.1 TAATCTTATTAATTACACATT 3 3 3 26 1 0.477121255 0 0 0 3 0 0 3 chr19:32875229-32875250 minimal NA NA NA UAUU minimal chr19 + 32875545 32875571 repeat Low_complexity-AT_rich RepeatMasker G7537.1 ATTAATATTTATAAAATTATTATTAG 27 8 27 286 0.931034483 0.954242509 0.172413793 0.294117647 0.586206897 12 0 2 27 chr19:32875545-32875571 minimal NA NA AUUUA UAUU minimal chr19 + 32875672 32875713 3'utr ZNF507 Ensembl G7540.1 TAACTTTGCAGCTTTTTTATTTAGGTAGCTTTAATTTATTT 14 2 12 186 0.8 0.77815125 0.066666667 0.166666667 0.333333333 10 2 1 12 chr19:32875672-32875713 minimal NA NA AUUUA UAUU minimal chr19 + 32875762 32875783 3'utr ZNF507 Ensembl G7541.1 ATTTATATATACTATATTCCT 8 3 6 79 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr19:32875762-32875783 minimal NA NA AUUUA UAUU minimal chr19 + 32875794 32875820 3'utr ZNF507 Ensembl G7542.1 TATGTGGACTTATATTCATTTTCTCC 5 2 3 50 0.8 0.602059991 0.2 0.25 0.4 3 1 0 4 chr19:32875794-32875820 minimal NA NA NA UAUU minimal chr19 + 32876087 32876112 3'utr ZNF507 Ensembl G7543.1 AATTTTTAAATTACCTTTATTTCTT 10 4 9 128 0.9 0.954242509 0 0.428571429 0.6 4 1 0 9 chr19:32876087-32876112 minimal NA NA NA UAUU minimal chr19 + 32877264 32877304 3'utr ZNF507 Ensembl G7544.1 TTTTAGTTTTCATAGACACTTATTTAATCTTTTTAAATTG 20 9 20 220 1 1.301029996 0.3 0.285714286 0.5 10 0 0 20 chr19:32877264-32877304 minimal NA NA AUUUA UAUU minimal chr19 + 32944754 32944783 repeat Low_complexity-AT_rich RepeatMasker G7546.1 CTCTTTTAGCTTTATTTATATAATTAAAT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr19:32944754-32944783 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 32973959 32973982 3'utr DPY19L3 Ensembl G7549.1 CTTTATTTCTTACTCATTTCAAT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr19:32973959-32973982 minimal NA NA NA UAUU minimal chr1 + 207968587 207968616 3'utr CD46 Ensembl G755.1 ATTTTTTCAAATTTAATATTTATATTAGA 3 2 3 42 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:207968587-207968616 minimal NA NA AUUUA UAUU minimal chr19 + 32974898 32974924 repeat Low_complexity-AT_rich RepeatMasker G7550.1 CTATATTTAAATTTATTTTAAATATT 6 4 5 75 0.833333333 0.698970004 0 0 0 6 1 0 5 chr19:32974898-32974924 minimal NA NA AUUUA UAUU minimal chr19 + 33023350 33023370 repeat LTR-LTR37B RepeatMasker G7551.1 TCATCTTATTTAATCTTTTG 4 2 4 44 1 0.602059991 1 0.5 0.75 1 0 0 4 chr19:33023350-33023370 minimal NA NA AUUUA UAUU minimal chr19 + 33074170 33074208 intron PDCD5 Ensembl G7552.1 CCCCTTACTGCATGGCATATTTATTTATTCTTTACTTT 11 7 11 130 1 1.041392685 0.090909091 0.222222222 0.363636364 7 0 0 11 chr19:33074170-33074208 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 33183928 33183951 intron NUDT19 Ensembl G7555.1 TCTTCCTATTTTTATTTATTTTT 4 4 4 60 1 0.602059991 0.25 0 0 4 0 0 4 chr19:33183928-33183951 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 33204044 33204076 3'utr NUDT19 Ensembl G7557.1 TTAACATTTTATTTTATTTTATTCTATTTTAT 16 6 10 261 0.555555556 0.522878745 0 0.125 0.222222222 14 6 2 10 chr19:33204044-33204076 minimal NA NA NA UAUU minimal chr19 + 33204476 33204498 3'utr NUDT19 Ensembl G7558.1 TTTATTTTTACTGTATTTAATA 7 3 7 91 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr19:33204476-33204498 minimal NA NA AUUUA UAUU minimal chr19 + 33204637 33204658 3'utr NUDT19 Ensembl G7559.1 CCTTAATTTTCCTACTATAAC 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr19:33204637-33204658 NA NA NA NA NA NA chr19 + 33590103 33590127 repeat Simple_repeat-(TTATA)n RepeatMasker G7562.1 ATCTATTTTAATTATTCATTATTT 3 2 3 42 1 0.477121255 0 0 0 3 0 0 3 chr19:33590103-33590127 minimal NA NA NA UAUU minimal chr19 + 33871110 33871134 3'utr CEBPG Ensembl G7566.1 CATAAACTTTGTTTTAACATAATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr19:33871110-33871134 NA NA NA NA NA NA chr19 + 33871689 33871724 3'utr CEBPG Ensembl G7567.1 TTTTAACCTTTAATTTATTTCTCTTAAATACATCT 46 13 35 595 0.782608696 1.556302501 0 0.216216216 0.369565217 29 10 0 36 chr19:33871689-33871724 minimal NA NA AUUUA UAUU minimal chr19 + 33873517 33873543 repeat Low_complexity-AT_rich RepeatMasker G7571.1 ATTTCTCTATTTTTTTTAAATATAAT 5 4 4 73 0.666666667 0.301029996 0 0 0 6 1 1 4 chr19:33873517-33873543 NA NA NA NA UAUU minimal chr19 + 34306143 34306174 3'utr KCTD15 Ensembl G7574.1 TTACTCTAATTTATTTATTTCTTTACTAATT 39 7 31 529 0.794871795 1.491361694 0 0.421052632 0.717948718 11 8 0 31 chr19:34306143-34306174 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 34306399 34306420 3'utr KCTD15 Ensembl G7575.1 TAAACCTCAAAACTCATTATT 5 2 4 31 0.8 0.602059991 0 0.666666667 0.8 1 1 0 4 chr19:34306399-34306420 minimal NA NA NA UAUU minimal chr19 + 34691971 34691992 repeat Low_complexity-AT_rich RepeatMasker G7579.1 CTTTTATAAATATTTTAATCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:34691971-34691992 minimal NA NA NA UAUU minimal chr1 + 210025094 210025130 3'utr DIEXF Ensembl G758.1 ATTTACCTCTAATTTATTACACTTAGTAAATTCTTC 17 2 16 197 0.888888889 0.903089987 0.055555556 0.444444444 0.722222222 5 1 1 16 chr1:210025094-210025130 minimal NA NA AUUUA UAUU minimal chr19 + 34708471 34708494 repeat Low_complexity-AT_rich RepeatMasker G7580.1 TACTCTTCTCTACATTTATATAT 3 2 3 33 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr19:34708471-34708494 minimal NA NA AUUUA NA minimal chr19 + 34719129 34719150 3'utr LSM14A Ensembl G7582.1 ATACATTATTTCATTATCTAA 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:34719129-34719150 minimal NA NA NA UAUU minimal chr19 + 34719616 34719642 3'utr LSM14A Ensembl G7584.1 ATTTAAATATTTTTATCTAATATTTT 19 5 16 261 0.8 0.903089987 0.05 0.307692308 0.55 9 3 1 16 chr19:34719616-34719642 minimal NA NA AUUUA UAUU minimal chr19 + 34790990 34791016 5'utr KIAA0355 Ensembl G7590.1 TATTACATTATATTACATTTTTAAAC 4 2 4 45 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:34790990-34791016 minimal NA NA NA UAUU minimal chr19 + 34844950 34844972 3'utr KIAA0355 Ensembl G7593.1 AAATAATAATAAATATATCTAT 4 4 4 28 1 0.602059991 0 0 0 4 0 0 4 chr19:34844950-34844972 NA NA NA NA NA NA chr19 + 34845112 34845137 repeat Low_complexity-AT_rich RepeatMasker G7596.1 TATTAATATTTTTTTTATATTTTCT 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr19:34845112-34845137 minimal NA NA NA UAUU minimal chr19 + 34917027 34917054 repeat Low_complexity-AT_rich RepeatMasker G7600.1 CATTTCCTTTTATTAATATAAATTAAA 13 8 13 139 0.928571429 0.812913357 0 0.3 0.5 7 0 1 13 chr19:34917027-34917054 minimal NA NA NA UAUU minimal chr19 + 34924376 34924397 intron UBA2 Ensembl G7601.1 TTTACAAATTTAATATTTATT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:34924376-34924397 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 34960498 34960536 3'utr UBA2 Ensembl G7602.1 AATTATTTTTAGCCTAGATCTAACCATTTTCATACTCT 6 5 6 47 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr19:34960498-34960536 minimal NA NA NA UAUU minimal chr19 + 35233031 35233054 3'utr ZNF181 Ensembl G7605.1 ATTCTCCCTTATTTAACATTAGA 13 2 12 118 0.923076923 1.079181246 0.153846154 0.6 0.846153846 2 1 0 12 chr19:35233031-35233054 minimal NA NA AUUUA UAUU minimal chr19 + 35517324 35517345 3'utr GRAMD1A Ensembl G7610.1 TATTATATTTATTTGGGGCCG 5 2 4 44 0.8 0.602059991 1 0.25 0.4 3 1 0 4 chr19:35517324-35517345 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 36066515 36066560 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G7614.1 ACCCCAGAAAAGGTGTTGGTTGATATAGACAGCAGGACGGTGGCC 1868 7 55 12814 0.021000382 -1.135855151 0.660557465 0.464285714 0.942726231 150 1813 751 55 chr19:36066515-36066560 NA NA NA NA NA NA chr19 + 36066700 36066735 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G7615.1 TGGGGCCGAAACGATCTCAACCTATTCTCAAACTT 285 6 8 1969 0.023188406 -0.882239848 0.046376812 0.308641975 0.837681159 56 277 60 8 chr19:36066700-36066735 NA NA NA NA UAUU minimal chr19 + 36715429 36715452 intron ZNF146 Ensembl G7626.1 AAAATATTTATCTTTTTACTATT 3 2 3 36 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr19:36715429-36715452 minimal NA NA AUUUA UAUU minimal chr19 + 36728592 36728613 repeat LINE-L1ME3C RepeatMasker G7631.1 TCATCTACAACTAATATTAAG 6 4 6 36 1 0.77815125 1 0.5 0.666666667 2 0 0 6 chr19:36728592-36728613 NA NA NA NA UAUU minimal chr19 + 36729307 36729351 repeat LINE-L1ME3C RepeatMasker G7632.1 TGGGAGGTGGGATGGGTATTGGTTAAAGGGGACTTCAGCTTTTT 3 3 3 19 1 0.477121255 0 0 0 3 0 0 3 chr19:36729307-36729351 NA NA NA NA UAUU minimal chr19 + 36729537 36729558 3'utr ZNF146 Ensembl G7633.1 ATTCATTTCCAATTAAATACT 6 2 4 50 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr19:36729537-36729558 NA NA NA NA NA NA chr19 + 36729571 36729596 3'utr ZNF146 Ensembl G7634.1 AAAATATTTCTAAAATTTTATCACG 6 2 3 57 0.666666667 0.602059991 0.5 0 0 6 2 0 4 chr19:36729571-36729596 minimal NA NA NA UAUU minimal chr19 + 36729623 36729655 repeat Low_complexity-AT_rich RepeatMasker G7635.1 TAATATGAAATTAATCTATTTTATTAAAATTT 14 8 12 149 0.857142857 1.079181246 0 0.272727273 0.428571429 8 2 0 12 chr19:36729623-36729655 minimal NA NA NA UAUU minimal chr19 + 36739977 36740008 repeat SINE-AluJb RepeatMasker G7636.1 TCTCAAAAAAAATTTTATTTATTTATTTATT 4 2 4 59 1 0.602059991 0 0 0 4 0 0 4 chr19:36739977-36740008 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 37211998 37212036 3'utr ZNF567 Ensembl G7647.1 TTTTGCATGTTTTCAATTTTATAAATATATATTTTATC 13 5 11 171 0.846153846 1.041392685 0 0.083333333 0.153846154 11 2 0 11 chr19:37211998-37212036 minimal NA NA NA UAUU minimal chr19 + 37212063 37212086 3'utr ZNF567 Ensembl G7648.1 CTTATTTCACTCAATTTTTTAAG 14 5 10 158 0.714285714 1 0.285714286 0.555555556 0.714285714 4 4 0 10 chr19:37212063-37212086 minimal NA NA NA UAUU minimal chr19 + 37267163 37267184 lincRNA AC020928.1 Ensembl G7651.1 ATTTAAATCTTCCACCTATTT 11 4 10 98 0.833333333 0.698970004 0.25 0.222222222 0.416666667 7 1 1 10 chr19:37267163-37267184 minimal NA NA AUUUA UAUU minimal chr19 + 37490223 37490250 repeat DNA-Tigger16b RepeatMasker G7659.1 TACTGTTAGCACCATATTTCTTAGCTG 2 2 2 16 1 0.301029996 0.5 0 0 2 0 0 2 chr19:37490223-37490250 NA NA NA NA UAUU minimal chr19 + 37490261 37490283 repeat DNA-Tigger16b RepeatMasker G7660.1 TTAAATACATTTATATTATTTA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr19:37490261-37490283 minimal NA NA AUUUA UAUU minimal chr19 + 37495855 37495876 NoAnnotation G7663.1 TAACTACCACCTAATAATTAA 3 2 3 15 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr19:37495855-37495876 NA NA NA NA NA NA chr19 + 37733275 37733300 intron ZNF383 Ensembl G7665.1 ATACTATTCTTACTTTAATTTTTCC 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:37733275-37733300 NA NA NA NA UAUU minimal chr19 + 37818322 37818348 repeat Low_complexity-AT_rich RepeatMasker G7670.1 TAATTATTTTTATTTTCTATATATTT 4 3 4 64 1 0.602059991 0 0 0 4 0 0 4 chr19:37818322-37818348 minimal NA NA NA UAUU minimal chr19 + 37859659 37859680 NoAnnotation G7672.1 CTATTTCATTTAATTCTAATT 3 3 3 32 1 0.477121255 0 0 0 3 0 0 3 chr19:37859659-37859680 minimal NA NA AUUUA UAUU minimal chr19 + 38033319 38033342 repeat LINE-L1MC4a RepeatMasker G7676.1 TTAATATTATTAAAATATTTATG 6 4 5 66 0.833333333 0.698970004 1 0 0 6 1 0 5 chr19:38033319-38033342 minimal NA NA AUUUA UAUU minimal chr1 + 210417264 210417288 3'utr SERTAD4 Ensembl G768.1 ACCAATTTTTAAAACATTTTCTTG 4 3 4 40 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr1:210417264-210417288 NA NA NA NA NA NA chr19 + 39220834 39220861 3'utr ACTN4 Ensembl G7680.1 AATTACTATTTACTTTATTAACTTACG 92 11 89 1001 0.956989247 1.648360011 0.139784946 0.463414634 0.76344086 22 3 1 89 chr19:39220834-39220861 minimal NA NA AUUUA UAUU minimal chr19 + 39220862 39220886 repeat Low_complexity-AT_rich RepeatMasker G7681.1 ATTTATTATATAAATATATATTCA 8 6 7 89 0.777777778 0.544068044 0 0.125 0.222222222 7 1 1 7 chr19:39220862-39220886 minimal NA NA AUUUA UAUU minimal chr19 + 39874268 39874297 3'utr SAMD4B Ensembl G7683.1 CTATATATTCTAATATTTTTCTACTCTCT 9 5 9 125 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr19:39874268-39874297 NA NA NA NA UAUU minimal chr19 + 39874800 39874825 3'utr SAMD4B Ensembl G7684.1 ATACATATTTATATAGTTCTTAACG 4 3 3 41 0.75 0.477121255 1 0 0 4 1 0 3 chr19:39874800-39874825 minimal NA NA AUUUA UAUU minimal chr19 + 39876287 39876309 NoAnnotation G7687.1 TTTAATGGTCTGGGCTTATTTT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr19:39876287-39876309 minimal NA NA NA UAUU minimal chr19 + 39899842 39899862 3'utr ZFP36 Ensembl G7688.1 ACTTTATTTATTCTAATATG 14 5 11 143 0.785714286 1.041392685 1 0.666666667 0.857142857 2 3 0 11 chr19:39899842-39899862 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 39899941 39899989 repeat Low_complexity-AT_rich RepeatMasker G7689.1 ATATAATTATTATAAGTAGACTATAATATATTTAGTAATATATATTAT 15 5 14 158 0.933333333 1.146128036 0 0.272727273 0.466666667 8 1 0 14 chr19:39899941-39899989 minimal NA NA AUUUA UAUU minimal chr19 + 39999031 39999067 3'utr DLL3 Ensembl G7692.1 TAAATAATGGTTATTTATATCCTATTTTTTCTCACC 20 6 17 272 0.85 1.230448921 0 0.285714286 0.5 10 3 0 17 chr19:39999031-39999067 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 40478409 40478429 coding PSMC4 Ensembl G7693.1 ACAATTTCTGGAGGCTGTGG 7 4 7 35 1 0.84509804 0.714285714 0.2 0.428571429 4 0 0 7 chr19:40478409-40478429 NA NA NA NA NA NA chr19 + 40488669 40488693 repeat LINE-L1ME1 RepeatMasker G7694.1 TACCTAATTTATTGTAGTTTTATT 6 3 6 70 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr19:40488669-40488693 minimal NA NA AUUUA UAUU minimal chr19 + 40523347 40523371 3'utr ZNF546 Ensembl G7696.1 CTTATACATAATATTTACATATTT 5 3 5 47 1 0.698970004 0.2 0 0 5 0 0 5 chr19:40523347-40523371 minimal NA NA AUUUA UAUU minimal chr19 + 40524938 40524966 intron ZNF546 Ensembl G7697.1 CTAAATATTTCTTTTAATTTAGTAAACG 6 2 6 70 1 0.77815125 0.5 0.5 0.666666667 2 0 0 6 chr19:40524938-40524966 minimal NA NA AUUUA UAUU minimal chr1 + 28608042 28608062 3'utr SESN2 Ensembl G77.1 ATTATAAATCCTCTTTATTT 9 2 6 93 0.777777778 0.84509804 0.333333333 0.4 0.666666667 3 2 0 7 chr1:28608042-28608062 minimal NA NA NA UAUU minimal chr19 + 41257291 41257316 coding SNRPA Ensembl G7703.1 ACTTACCTCAACACTTCACTCCATG 2 2 2 12 1 0.301029996 1 0 0 2 0 0 2 chr19:41257291-41257316 NA NA NA NA NA NA chr19 + 41257333 41257354 coding SNRPA Ensembl G7704.1 CCCTAACCACACTATTTATAT 4 3 4 24 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:41257333-41257354 minimal NA NA AUUUA UAUU minimal chr19 + 41346738 41346761 NoAnnotation G7705.1 TCTATTCAAATCTTTTATTAATT 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr19:41346738-41346761 minimal NA NA NA UAUU minimal chr1 + 211608302 211608329 repeat SINE-AluJo RepeatMasker G771.1 CAAGACCCTATCTCTAAAACTATTTTT 5 4 5 41 0.833333333 0.397940009 0 0 0 6 0 1 5 chr1:211608302-211608329 NA NA NA NA UAUU minimal chr19 + 42411564 42411595 repeat Low_complexity-AT_rich RepeatMasker G7711.1 AATTGGAGGTTTATTTTTTAATATATATTAT 5 4 4 67 0.8 0.602059991 0 0 0 5 1 0 4 chr19:42411564-42411595 minimal NA NA NA UAUU minimal chr19 + 44343137 44343159 intron ZNF283 Ensembl G7717.1 TACAATAATACTAACTTTTATA 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:44343137-44343159 minimal NA NA NA NA NA chr19 + 44372477 44372507 repeat DNA-Charlie5 RepeatMasker G7721.1 AAATACTTAGTACTTTATAATTAAATTATT 5 4 4 54 1 0.698970004 0 0 0 5 0 0 5 chr19:44372477-44372507 minimal NA NA NA UAUU minimal chr19 + 44479968 44479989 NoAnnotation G7723.1 ATTATTATCTTATTCCACTTG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr19:44479968-44479989 minimal NA NA NA UAUU minimal chr19 + 44492897 44492917 repeat Simple_repeat-(TTTTG)n RepeatMasker G7726.1 TTACCATTATTTATTTTATG 5 2 5 55 1 0.698970004 1 0.5 0.8 1 0 0 5 chr19:44492897-44492917 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 44501591 44501611 coding ZNF155 Ensembl G7728.1 ATATACTTTTATCATTATTT 6 3 5 67 0.833333333 0.698970004 0 0.25 0.5 3 1 0 5 chr19:44501591-44501611 minimal NA NA NA UAUU minimal chr19 + 44515967 44515990 3'utr ZNF230 Ensembl G7730.1 TGAGGACAGTTAGTATTTATCTT 5 2 5 39 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr19:44515967-44515990 minimal NA NA AUUUA UAUU minimal chr19 + 44516104 44516124 3'utr ZNF230 Ensembl G7731.1 CCACCTTTTCTTCATTTATC 5 2 2 48 0.4 0.301029996 0.4 0.25 0.4 3 3 0 2 chr19:44516104-44516124 minimal NA NA AUUUA NA minimal chr19 + 44572246 44572266 NoAnnotation G7736.1 ATTTTTCTATTTTATAATTG 3 2 3 36 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr19:44572246-44572266 minimal NA NA NA UAUU minimal chr1 + 212276548 212276569 3'utr DTL Ensembl G774.1 TCTTCACTTTTTAAATTATTC 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr1:212276548-212276569 minimal NA NA NA UAUU minimal chr19 + 44613059 44613085 repeat Low_complexity-AT_rich RepeatMasker G7743.1 CATATTATTATTTTTTCTTTTAAATT 4 4 4 63 1 0.602059991 0 0 0 4 0 0 4 chr19:44613059-44613085 minimal NA NA NA UAUU minimal chr19 + 44613851 44613874 NoAnnotation G7744.1 TGCATTTATTCCTATAATAATAT 4 3 4 37 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr19:44613851-44613874 minimal NA NA AUUUA UAUU minimal chr19 + 44662737 44662760 3'utr ZNF226 Ensembl G7745.1 CATTCTCTTATTTAAAATATTTG 14 8 11 151 0.785714286 1.041392685 0.214285714 0.076923077 0.142857143 12 3 0 11 chr19:44662737-44662760 minimal NA NA AUUUA UAUU minimal chr19 + 44664757 44664779 intron ZNF226 Ensembl G7748.1 TATTTTTCCATTTTATAATTCC 4 2 3 49 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr19:44664757-44664779 minimal NA NA NA UAUU minimal chr19 + 44666492 44666514 intron ZNF226 Ensembl G7749.1 CTTTACTCAATAAATTATATCT 5 3 5 43 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:44666492-44666514 minimal NA NA NA NA NA chr19 + 44689099 44689120 NoAnnotation G7752.1 TAACTACCTTTCTAAATTTTG 2 2 2 17 1 0.301029996 1 0 0 2 0 0 2 chr19:44689099-44689120 NA NA NA NA NA NA chr19 + 44690058 44690081 NoAnnotation G7753.1 CCTTTAATCCATTTTTATTTAAT 4 2 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:44690058-44690081 minimal NA NA AUUUA UAUU minimal chr19 + 44690522 44690543 NoAnnotation G7754.1 ATTTCTTCTTTTATTAATAAC 3 2 2 34 1 0.477121255 0.333333333 0 0 3 0 0 3 chr19:44690522-44690543 minimal NA NA NA UAUU minimal chr19 + 44691572 44691597 NoAnnotation G7756.1 TAATCTCTTATACTTTTTTTATTTC 6 4 4 84 0.666666667 0.602059991 0 0 0 6 2 0 4 chr19:44691572-44691597 minimal NA NA NA UAUU minimal chr19 + 44691761 44691787 NoAnnotation G7758.1 TTATTTTCTTCTCTCTATTTTCTACT 4 2 2 58 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr19:44691761-44691787 minimal NA NA NA UAUU minimal chr19 + 44694413 44694436 NoAnnotation G7760.1 TTTATTTATTACTTAATAATTTA 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:44694413-44694436 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 44695462 44695482 NoAnnotation G7762.1 AAATTCAATTATTTCTATTG 5 2 5 45 1 0.698970004 1 0.5 0.8 1 0 0 5 chr19:44695462-44695482 minimal NA NA NA UAUU minimal chr19 + 44698405 44698426 NoAnnotation G7764.1 CATTTATTATTATTCTTATTT 5 2 5 65 1 0.698970004 0 1 1 0 0 0 5 chr19:44698405-44698426 minimal NA NA AUUUA UAUU minimal chr19 + 44701167 44701197 NoAnnotation G7765.1 ACTACTTTTCCTTTTATCTTTATATATATG 25 9 21 322 0.807692308 1.021189299 0.076923077 0.19047619 0.346153846 17 4 1 21 chr19:44701167-44701197 minimal NA NA NA NA NA chr19 + 44701546 44701569 repeat Low_complexity-AT_rich RepeatMasker G7766.1 ACTTAAATTATTTTTAAATTATT 5 2 3 62 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr19:44701546-44701569 minimal NA NA NA UAUU minimal chr19 + 44702099 44702123 NoAnnotation G7768.1 CTATTTAAAAAAATCTTTTAATTT 8 4 8 78 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr19:44702099-44702123 minimal NA NA AUUUA UAUU minimal chr19 + 44702127 44702148 NoAnnotation G7769.1 ATCTATATTCCATATCATATT 21 8 18 190 0.857142857 1.255272505 0.476190476 0.285714286 0.523809524 10 3 0 18 chr19:44702127-44702148 NA NA NA NA UAUU minimal chr19 + 44702232 44702254 NoAnnotation G7770.1 ATTTCTCCATTTTATTATCTTT 6 3 4 72 0.666666667 0.602059991 0.166666667 0.2 0.333333333 4 2 0 4 chr19:44702232-44702254 minimal NA NA NA UAUU minimal chr19 + 44702295 44702323 NoAnnotation G7771.1 AACTTTCTATTATCTTCCATTAGTCTAT 21 2 17 235 0.80952381 1.230448921 0.095238095 0.444444444 0.761904762 5 4 0 17 chr19:44702295-44702323 minimal NA NA NA UAUU minimal chr19 + 44702389 44702411 NoAnnotation G7772.1 CATAAACCCACCTCTTTCTATT 3 2 2 22 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:44702389-44702411 NA NA NA NA UAUU minimal chr19 + 44741307 44741339 3'utr ZNF227 Ensembl G7776.1 TTTTGGGTTATTATCCCTTTTCTTTAATTTTC 11 7 10 150 0.909090909 1 0 0 0 11 1 0 10 chr19:44741307-44741339 minimal NA NA NA UAUU minimal chr19 + 44742142 44742167 NoAnnotation G7777.1 TATATTTTTATATTTCTTTAAACTT 4 2 4 54 1 0.602059991 0 0 0 4 0 0 4 chr19:44742142-44742167 minimal NA NA NA UAUU minimal chr19 + 44742779 44742803 NoAnnotation G7778.1 ACCTTATTTAAATCTTAAAATTAT 7 2 2 59 0.285714286 0.301029996 0.142857143 0.166666667 0.285714286 5 5 0 2 chr19:44742779-44742803 minimal NA NA AUUUA UAUU minimal chr1 + 212794045 212794073 3'utr ATF3 Ensembl G778.1 AAAATATTACTTATTTATCCTAGTATTC 26 6 21 210 0.925925926 1.096910013 0.037037037 0.285714286 0.62962963 10 1 1 25 chr1:212794045-212794073 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 44746593 44746621 NoAnnotation G7780.1 TATACCCATATTTCTCTTCTCTTTTTCC 7 4 5 77 0.714285714 0.698970004 0 0.166666667 0.285714286 5 2 0 5 chr19:44746593-44746621 NA NA NA NA UAUU minimal chr19 + 44749128 44749150 NoAnnotation G7781.1 CAACTTATTTATATTAACATTG 9 5 8 82 0.888888889 0.903089987 0.888888889 0.333333333 0.555555556 4 1 0 8 chr19:44749128-44749150 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 44751077 44751100 NoAnnotation G7783.1 AAATTACCTCTTTATTATTATTT 6 3 6 69 1 0.77815125 0.5 0.25 0.5 3 0 0 6 chr19:44751077-44751100 minimal NA NA NA UAUU minimal chr1 + 213133885 213133908 intron VASH2 Ensembl G779.1 CACTTTATTTATTTATCTATTTG 7 3 5 93 0.714285714 0.698970004 1 0.75 0.857142857 1 2 0 5 chr1:213133885-213133908 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 48214052 48214074 repeat Low_complexity-AT_rich RepeatMasker G7791.1 ACCTTTTATATATTATATATAT 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr19:48214052-48214074 minimal NA NA NA UAUU minimal chr19 + 48969698 48969719 repeat Simple_repeat-(TA)n RepeatMasker G7799.1 ATATCTATCTATTTTTTCCCT 3 2 2 33 1 0.477121255 0.333333333 0 0 3 0 0 3 chr19:48969698-48969719 NA NA NA NA UAUU minimal chr19 + 49379244 49379274 3'utr PPP1R15A Ensembl G7800.1 CCTATAATTTATTAACTATTTATTTTTTCT 222 13 184 2802 0.814159292 1.565847819 0 0.5625 0.845132743 35 38 4 184 chr19:49379244-49379274 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 50129359 50129383 3'utr PRR12 Ensembl G7811.1 TTAATTATTTTTAATCTTATTTAT 7 4 5 107 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr19:50129359-50129383 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 52729612 52729641 3'utr PPP2R1A Ensembl G7818.1 TTTTTATTTTATTCCTTTTATTTTCCCCC 9 6 9 160 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr19:52729612-52729641 minimal NA NA NA UAUU minimal chr19 + 53063601 53063624 repeat Low_complexity-AT_rich RepeatMasker G7823.1 TCATAATTATTAATATTATTATT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:53063601-53063624 minimal NA NA NA UAUU minimal chr19 + 53857837 53857857 3'utr ZNF845 Ensembl G7824.1 TATAATCATTCAACAATATT 4 2 4 28 1 0.602059991 0 0.5 0.75 1 0 0 4 chr19:53857837-53857857 NA NA NA NA UAUU minimal chr19 + 53858001 53858022 3'utr ZNF845 Ensembl G7825.1 TTTCTTTAAACATTATTTATT 4 3 3 45 0.75 0.477121255 0.25 0 0 4 1 0 3 chr19:53858001-53858022 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 56890311 56890334 NoAnnotation G7838.1 AATTATATTTTCCCCCATATTAT 7 3 6 69 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr19:56890311-56890334 minimal NA NA NA UAUU minimal chr19 + 57091085 57091114 repeat Low_complexity-AT_rich RepeatMasker G7841.1 TTACAACTTAAACTTATTTTTAAAATATT 4 3 4 43 1 0.602059991 0 0 0 4 0 0 4 chr19:57091085-57091114 minimal NA NA NA UAUU minimal chr19 + 57725465 57725485 3'utr ZNF264 Ensembl G7845.1 TTCACTTATTATTTTTAGCT 3 2 3 33 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:57725465-57725485 minimal NA NA NA UAUU minimal chr19 + 57725570 57725590 3'utr ZNF264 Ensembl G7846.1 TAATATACCTTTTATTTCCT 3 2 3 30 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr19:57725570-57725590 minimal NA NA NA UAUU minimal chr19 + 57726345 57726365 3'utr ZNF264 Ensembl G7847.1 AAATATTCCTCTAATTTATT 14 4 11 129 0.785714286 1.041392685 0.428571429 0.5 0.714285714 4 3 0 11 chr19:57726345-57726365 minimal NA NA AUUUA UAUU minimal chr19 + 57726562 57726604 3'utr ZNF264 Ensembl G7848.1 ATTTTTCTTCTGGAGGCTTTTAAATTACATATTTATTTTATT 8 5 8 110 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr19:57726562-57726604 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 57726726 57726753 3'utr ZNF264 Ensembl G7849.1 CACTTCTTTTTATTTTTAATATTTAAA 43 12 39 621 0.906976744 1.591064607 0 0.384615385 0.627906977 16 4 0 39 chr19:57726726-57726753 minimal NA NA AUUUA UAUU minimal chr19 + 57728105 57728127 3'utr ZNF264 Ensembl G7854.1 ATTTACATTAAAATAATTATTG 28 6 26 254 0.928571429 1.414973348 0.75 0.5 0.785714286 6 2 0 26 chr19:57728105-57728127 minimal NA NA AUUUA UAUU minimal chr19 + 57766666 57766693 3'utr ZNF805 Ensembl G7857.1 ATTTCTTTTTTCTTACTATTTTTATTT 17 7 17 285 1 1.230448921 0 0.416666667 0.588235294 7 0 0 17 chr19:57766666-57766693 minimal NA NA NA UAUU minimal chr19 + 57766854 57766884 3'utr ZNF805 Ensembl G7859.1 CCTATCTTTTCATTATTTAAATTTTCTTTG 8 4 7 96 0.777777778 0.544068044 0.111111111 0.125 0.222222222 7 1 1 7 chr19:57766854-57766884 minimal NA NA AUUUA UAUU minimal chr19 + 57767844 57767870 3'utr ZNF805 Ensembl G7860.1 CTTTTTAATTATGTATTTATTTTATT 8 4 5 109 0.75 0.77815125 0 0.333333333 0.5 4 2 0 6 chr19:57767844-57767870 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 57768888 57768911 3'utr ZNF805 Ensembl G7862.1 TTAATACTCTTATCAATTTTTAT 5 3 3 57 0.6 0.477121255 0 0.25 0.4 3 2 0 3 chr19:57768888-57768911 minimal NA NA NA NA NA chr19 + 57772540 57772565 3'utr ZNF805 Ensembl G7864.1 CTCATTTATTTATAATCTACTATTC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:57772540-57772565 UUAUUUAU NA NA AUUUA UAUU minimal chr19 + 57804037 57804057 3'utr ZNF460 Ensembl G7868.1 TCATCCCCTCCTTATTTTAT 3 2 3 27 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr19:57804037-57804057 minimal NA NA NA UAUU minimal chr19 + 57804950 57804973 3'utr ZNF460 Ensembl G7871.1 CATATCCATCTCAATCATTTATC 6 5 5 47 0.833333333 0.698970004 0 0 0 6 1 0 5 chr19:57804950-57804973 minimal NA NA AUUUA NA minimal chr19 + 57805758 57805780 NoAnnotation G7873.1 TTCTCAGCAGCATTTTTTATTT 4 2 2 42 0.75 0.477121255 0.25 0 0 4 1 0 3 chr19:57805758-57805780 minimal NA NA NA UAUU minimal chr19 + 57805915 57805940 NoAnnotation G7874.1 TCTATTCACCTTATTTACCCATTTT 11 5 10 111 0.909090909 1 0 0.285714286 0.545454545 5 1 0 10 chr19:57805915-57805940 minimal NA NA AUUUA UAUU minimal chr19 + 57807019 57807043 NoAnnotation G7875.1 TTTTCCATGTATTCTTATTTTATT 3 2 2 39 1 0.477121255 0.333333333 0 0 3 0 0 3 chr19:57807019-57807043 minimal NA NA NA UAUU minimal chr19 + 57807431 57807452 NoAnnotation G7876.1 TTACTTATTACCTTTATTATG 43 10 39 467 0.906976744 1.591064607 0.581395349 0.571428571 0.790697674 9 4 0 39 chr19:57807431-57807452 minimal NA NA NA UAUU minimal chr19 + 57807781 57807802 NoAnnotation G7878.1 CCCATTCTTTCTATTATTATG 3 2 2 31 0.666666667 0.301029996 1 0 0 3 1 0 2 chr19:57807781-57807802 minimal NA NA NA UAUU minimal chr19 + 57807854 57807877 NoAnnotation G7879.1 CTTTTTCTCCACCTATGGAGATA 29 5 27 214 0.931034483 1.431363764 0 0.545454545 0.827586207 5 2 0 27 chr19:57807854-57807877 NA NA NA NA NA NA chr19 + 57808177 57808200 NoAnnotation G7880.1 TTTGAGAAGAATTCATATTTAAT 5 3 5 33 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr19:57808177-57808200 minimal NA NA AUUUA UAUU minimal chr19 + 57808571 57808591 NoAnnotation G7881.1 TTTTATTTATTACTCTTCTG 6 2 4 74 0.666666667 0.602059991 1 0.666666667 0.833333333 1 2 0 4 chr19:57808571-57808591 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 57808591 57808613 NoAnnotation G7882.1 ATCTTTATTAATTCTTTCCTTG 7 3 7 84 1 0.84509804 1 0.666666667 0.857142857 1 0 0 7 chr19:57808591-57808613 minimal NA NA NA UAUU minimal chr19 + 57809054 57809077 NoAnnotation G7884.1 TTTATTACTAAATACTTCCCTCT 4 2 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:57809054-57809077 minimal NA NA NA UAUU minimal chr19 + 57809157 57809177 NoAnnotation G7885.1 TTTCTTAATTTCTTCATTAC 6 3 4 58 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr19:57809157-57809177 NA NA NA NA NA NA chr19 + 57809294 57809316 NoAnnotation G7886.1 ATTTTAATTCTTTTAATTTTTG 8 4 8 112 1 0.903089987 1 0.75 0.875 1 0 0 8 chr19:57809294-57809316 NA NA NA NA NA NA chr19 + 57809552 57809580 NoAnnotation G7888.1 TCTTCCCCTTTAGATCTAATAATATTTG 29 3 28 323 0.933333333 1.146128036 0.066666667 0.307692308 0.7 9 1 1 28 chr19:57809552-57809580 NA NA NA NA UAUU minimal chr19 + 57810317 57810343 NoAnnotation G7891.1 TTCTTTTCTTCATCTCTTATTTTTTA 12 4 7 180 0.666666667 0.903089987 0.083333333 0.222222222 0.416666667 7 4 0 8 chr19:57810317-57810343 minimal NA NA NA UAUU minimal chr19 + 57811215 57811237 NoAnnotation G7893.1 TTTTCTTTTATTTTTAATCTTG 4 2 4 59 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr19:57811215-57811237 minimal NA NA NA UAUU minimal chr19 + 57811602 57811624 NoAnnotation G7894.1 TATTAAATATATATTTTTTTCT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr19:57811602-57811624 NA NA NA NA UAUU minimal chr19 + 57812043 57812066 NoAnnotation G7895.1 TCATTCTTATTTATTCTTCTCTC 4 3 3 52 0.75 0.477121255 0 0 0 4 1 0 3 chr19:57812043-57812066 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 57812071 57812102 NoAnnotation G7896.1 TAATTCCAAACAAACTCTTTATCTTTCTTTG 15 7 13 125 0.866666667 1.113943352 0.2 0.25 0.4 9 2 0 13 chr19:57812071-57812102 minimal NA NA NA NA NA chr19 + 57812135 57812159 NoAnnotation G7897.1 TACCTTATATTTTATACATTAAAT 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr19:57812135-57812159 minimal NA NA NA UAUU minimal chr19 + 57812187 57812209 NoAnnotation G7898.1 ATTTTAAAATATTTCTTTCTTA 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr19:57812187-57812209 NA NA NA NA UAUU minimal chr19 + 57817854 57817875 NoAnnotation G7900.1 AATATACCTTTCTAAATATCT 5 3 3 42 0.6 0.477121255 0 0 0 5 2 0 3 chr19:57817854-57817875 NA NA NA NA NA NA chr19 + 57818433 57818454 NoAnnotation G7901.1 TATTCTCTCTTTTATTCTATG 7 3 7 82 1 0.84509804 0.714285714 0.4 0.571428571 3 0 0 7 chr19:57818433-57818454 minimal NA NA NA UAUU minimal chr19 + 57818678 57818707 NoAnnotation G7902.1 TATATTTAATTCTTTACTCTCATTATACT 28 6 25 325 0.833333333 0.920818754 0 0.352941176 0.633333333 11 3 2 25 chr19:57818678-57818707 minimal NA NA AUUUA UAUU minimal chr19 + 57819000 57819026 NoAnnotation G7904.1 TATACATATTTCATTCTTCTATTTCA 44 11 38 532 0.826086957 1.102662342 0 0.322580645 0.543478261 21 6 2 38 chr19:57819000-57819026 NA NA NA NA UAUU minimal chr19 + 57819066 57819098 NoAnnotation G7905.1 AACTACTACTGGATTATTTTAATCCATTAGAA 9 2 9 73 1 0.954242509 0 0.666666667 0.888888889 1 0 0 9 chr19:57819066-57819098 minimal NA NA NA UAUU minimal chr19 + 57819251 57819284 NoAnnotation G7908.1 AATGTATATACTCATTTTATTCATTAGTCTAAG 16 4 13 192 0.8125 1.113943352 0.125 0.3 0.5625 7 3 0 13 chr19:57819251-57819284 minimal NA NA NA UAUU minimal chr19 + 57819294 57819318 NoAnnotation G7909.1 TAACACTTCTCTAACCTATTATAG 12 6 11 89 0.846153846 0.740362689 0.307692308 0.222222222 0.461538462 7 1 1 11 chr19:57819294-57819318 minimal NA NA NA UAUU minimal chr19 + 57842031 57842053 3'utr ZNF543 Ensembl G7910.1 TAATTCCTTTTTTATATTTTTA 3 3 3 42 1 0.477121255 0.333333333 0 0 3 0 0 3 chr19:57842031-57842053 minimal NA NA NA UAUU minimal chr19 + 57842079 57842103 3'utr ZNF543 Ensembl G7911.1 TTTTACCTCATATTAAATATATTG 10 5 6 102 0.6 0.77815125 0.4 0.111111111 0.2 8 4 0 6 chr19:57842079-57842103 NA NA NA NA UAUU minimal chr19 + 57842148 57842176 repeat Simple_repeat-(TTTA)n RepeatMasker G7912.1 CCTTTTTTATTTATTTACTTATTTACTT 10 5 7 176 0.7 0.84509804 0.1 0.111111111 0.2 8 3 0 7 chr19:57842148-57842176 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 + 57911611 57911636 3'utr ZNF548 Ensembl G7919.1 TATTTATATACCACATTTATTTATC 6 4 6 67 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr19:57911611-57911636 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 217856635 217856658 coding SPATA17 Ensembl G792.1 TACCTCTTTAATTATTATTATTT 4 2 4 52 0.666666667 0.124938737 0 0.5 0.666666667 2 0 2 4 chr1:217856635-217856658 minimal NA NA NA UAUU minimal chr19 + 57958416 57958442 NoAnnotation G7921.1 CTACTCTAAATTAATTTTTTCTTTAG 6 4 6 73 1 0.77815125 0.166666667 0.2 0.333333333 4 0 0 6 chr19:57958416-57958442 NA NA NA NA NA NA chr19 + 58006002 58006029 3'utr ZNF419 Ensembl G7922.1 ATCTTCTTTAATAAATATTTATTTCCC 17 9 14 209 0.823529412 1.146128036 0 0.214285714 0.352941176 11 3 0 14 chr19:58006002-58006029 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 + 58019804 58019827 intron ZNF773 Ensembl G7924.1 ATCTTCTTTAATAAATATTTACT 3 2 3 32 1 0.477121255 0 0 0 3 0 0 3 chr19:58019804-58019827 minimal NA NA AUUUA UAUU minimal chr19 + 58134655 58134675 3'utr ZNF134 Ensembl G7929.1 TTTATCCATTTATCTTAATT 3 2 2 34 0.666666667 0.301029996 0.666666667 0 0 3 1 0 2 chr19:58134655-58134675 minimal NA NA AUUUA NA minimal chr19 + 58269308 58269340 3'utr ZNF776 Ensembl G7932.1 TTCTTCTTTTTTCTTTATTATTATTTTTATTT 15 4 12 261 0.8 1.079181246 0 0.166666667 0.333333333 10 3 0 12 chr19:58269308-58269340 minimal NA NA NA UAUU minimal chr19 + 58314246 58314271 intron ZNF586 Ensembl G7937.1 CTACTAATATTAAACTTAATTTTAG 3 2 3 30 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr19:58314246-58314271 NA NA NA NA UAUU minimal chr19 + 58373022 58373044 3'utr ZNF587 Ensembl G7938.1 AATTTTATCTATTTCCCATTTC 4 2 3 44 1 0.602059991 0 0 0 4 0 0 4 chr19:58373022-58373044 minimal NA NA NA UAUU minimal chr19 + 58814870 58814893 NoAnnotation G7943.1 ACAGTGATGAGGAATAATTTTCA 3 2 2 15 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:58814870-58814893 NA NA NA NA NA NA chr19 + 58826461 58826490 lincRNA AC020915.4 Ensembl G7944.1 TTATCCCTTCCTCCCTATTCACTCTACCT 7 3 6 65 0.857142857 0.77815125 0 0.166666667 0.285714286 5 1 0 6 chr19:58826461-58826490 minimal NA NA NA UAUU minimal chr19 - 1009701 1009723 3'utr C19orf6 Ensembl G7956.1 CTCATTCCATTCTATTTAATTG 7 3 5 71 0.714285714 0.698970004 0 0.2 0.428571429 4 2 0 5 chr19:1009701-1009723 minimal NA NA AUUUA UAUU minimal chr19 - 2428171 2428193 3'utr LMNB2 Ensembl G7958.1 TACAACACTCCAATAAACATTT 2 2 2 6 1 0.301029996 0 0 0 2 0 0 2 chr19:2428171-2428193 NA NA NA NA NA NA chr1 + 218477163 218477191 intron RRP15 Ensembl G796.1 TAAATTATTATTTCCTAATTTAACTATT 4 3 4 53 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr1:218477163-218477191 minimal NA NA AUUUA UAUU minimal chr19 - 3053685 3053714 3'utr AES Ensembl G7962.1 CTAAACTCCCATAGTATTTATGGTGGCCG 4 3 3 32 0.75 0.477121255 0 0 0 4 1 0 3 chr19:3053685-3053714 minimal NA NA AUUUA UAUU minimal chr19 - 4046495 4046525 3'utr ZBTB7A Ensembl G7974.1 TACTACACTTTATCTTAATTCTTAATTTAA 16 5 14 145 0.823529412 0.84509804 0 0.3 0.588235294 7 2 1 14 chr19:4046495-4046525 minimal NA NA AUUUA NA minimal chr19 - 4675282 4675305 3'utr DPP9 Ensembl G7975.1 ATTCTTATTCTTTTATAATTATG 5 2 5 64 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:4675282-4675305 minimal NA NA NA UAUU minimal chr19 - 4724677 4724701 tRNA tRNA-tRNA-Val-GTG RepeatMasker G7976.1 TTATCACATTCGCCTCACACGCGA 18 2 2 87 0.1 -0.176091259 0.4 0.2 0.4 12 16 2 2 chr19:4724677-4724701 minimal NA NA NA NA NA chr19 - 4815950 4815976 3'utr TICAM1 Ensembl G7977.1 TCTTTTAATTATAATAAATATTTATT 4 2 3 55 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr19:4815950-4815976 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 218498189 218498210 intron RRP15 Ensembl G798.1 ACTTTTCATATTTAATTTCCT 6 3 5 66 0.833333333 0.698970004 0 0 0 6 1 0 5 chr1:218498189-218498210 minimal NA NA AUUUA UAUU minimal chr19 - 6413776 6413804 3'utr KHSRP Ensembl G7980.1 AACTTATAAAATTATATATATATATATT 21 6 18 197 0.782608696 0.77815125 0 0.4 0.608695652 9 3 2 18 chr19:6413776-6413804 minimal NA NA NA UAUU minimal chr19 - 8024160 8024182 3'utr ELAVL1 Ensembl G7984.1 TTTTATATAAAATAATTTATTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:8024160-8024182 minimal NA NA AUUUA UAUU minimal chr19 - 8027314 8027337 3'utr ELAVL1 Ensembl G7986.1 TTATCTATTAACCAAAACCTTTG 7 3 5 51 0.714285714 0.698970004 0 0.5 0.714285714 2 2 0 5 chr19:8027314-8027337 minimal NA NA NA UAUU minimal chr19 - 8376332 8376355 3'utr NDUFA7 Ensembl G7989.1 CTCCTTGGATTTCCTCCAGGGAG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:8376332-8376355 NA NA NA NA NA NA chr19 - 9402085 9402109 NoAnnotation G7993.1 CATCAATACCATACTATCTTAATT 3 2 3 22 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:9402085-9402109 NA NA NA NA NA NA chr19 - 9671802 9671831 NoAnnotation G7997.1 TATCCACACATTAATAACTCTATTTCTAT 15 6 13 128 0.866666667 1.113943352 0 0.153846154 0.266666667 11 2 0 13 chr19:9671802-9671831 NA NA NA NA UAUU minimal chr19 - 9672149 9672171 NoAnnotation G7999.1 TATCATAAATTCTTAATCTATG 13 3 12 115 0.923076923 1.079181246 0 0.375 0.615384615 5 1 0 12 chr19:9672149-9672171 NA NA NA NA NA NA chr1 + 1251988 1252011 NoAnnotation G8.1 ACTTCTTTTAAATTTAATTTATT 6 3 3 81 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr1:1251988-1252011 minimal NA NA AUUUA UAUU minimal chr1 + 28826826 28826849 repeat Low_complexity-AT_rich RepeatMasker G80.1 TCTTCCCATCAATATTAATTATT 9 3 8 82 0.888888889 0.903089987 0 0.4 0.666666667 3 1 0 8 chr1:28826826-28826849 minimal NA NA NA UAUU minimal chr19 - 9672181 9672214 NoAnnotation G8000.1 TTATCCTTATTCATTTATTTACCCATTTACTTG 12 5 11 158 0.916666667 1.041392685 0 0.090909091 0.166666667 10 1 0 11 chr19:9672181-9672214 minimal NA NA AUUUA UAUU minimal chr19 - 9676382 9676408 3'utr ZNF121 Ensembl G8002.1 AATCTTTTTTTATTATTTTATTTTAT 7 3 6 110 0.857142857 0.77815125 0 0.5 0.714285714 2 1 0 6 chr19:9676382-9676408 minimal NA NA NA UAUU minimal chr19 - 9676629 9676662 coding ZNF121 Ensembl G8003.1 CCTACAATAGATTTTATTTACTTACTAAACATT 4 3 4 39 1 0.602059991 0 0 0 4 0 0 4 chr19:9676629-9676662 minimal NA NA AUUUA UAUU minimal chr19 - 9718382 9718411 3'utr ZNF561 Ensembl G8006.1 ACTCTTACTTTTCCACTTTAGTCGTTAGG 13 2 13 128 1 1.113943352 0 0.6 0.846153846 2 0 0 13 chr19:9718382-9718411 NA NA NA NA NA NA chr19 - 9756568 9756596 NoAnnotation G8007.1 ATCATACCTTTAATTTATTTTATTCTTG 9 5 9 115 0.9 0.653212514 0 0.111111111 0.2 8 0 1 9 chr19:9756568-9756596 minimal NA NA AUUUA UAUU minimal chr1 + 218504574 218504599 3'utr RRP15 Ensembl G802.1 TACACTTTATATATACTTCATTAAA 9 3 8 88 0.888888889 0.903089987 0 0.125 0.222222222 7 1 0 8 chr1:218504574-218504599 minimal NA NA NA NA NA chr19 - 14104663 14104687 5'utr RFX1 Ensembl G8025.1 CCTTATTTATTATCATTTTCCCCA 12 4 10 134 0.833333333 1 0 0.333333333 0.5 6 2 0 10 chr19:14104663-14104687 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 15348072 15348096 NoAnnotation G8028.1 CTACAATTTCTTTTCTTTCCCCTC 4 2 3 43 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr19:15348072-15348096 NA NA NA NA NA NA chr1 + 218504761 218504781 3'utr RRP15 Ensembl G803.1 TACTAATTCATCATTAAACT 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr1:218504761-218504781 NA NA NA NA NA NA chr19 - 15348388 15348414 3'utr BRD4 Ensembl G8030.1 AATTCTATTTTATTTTTAATTCTCTC 4 4 4 53 1 0.602059991 0 0 0 4 0 0 4 chr19:15348388-15348414 minimal NA NA NA UAUU minimal chr19 - 18390874 18390895 3'utr JUND Ensembl G8040.1 CCTTTCCTTTACTTTTACTTT 4 2 3 49 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr19:18390874-18390895 NA NA NA NA NA NA chr19 - 21907278 21907303 3'utr ZNF100 Ensembl G8047.1 TATAATAAAATCCCTACATTTCTGA 2 2 2 15 1 0.301029996 0 0 0 2 0 0 2 chr19:21907278-21907303 NA NA NA NA NA NA chr19 - 21908430 21908456 3'utr ZNF100 Ensembl G8050.1 TAATTCAACTCTTAAATTATTTCCTG 7 5 7 68 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr19:21908430-21908456 minimal NA NA NA UAUU minimal chr19 - 21988599 21988622 NoAnnotation G8051.1 ACTAACATTTCTATTAATCTATT 3 2 3 26 0.75 0.176091259 0 0 0 4 0 1 3 chr19:21988599-21988622 NA NA NA NA UAUU minimal chr19 - 21989296 21989319 NoAnnotation G8053.1 CATTATTTAAAACATTTTTTATG 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr19:21989296-21989319 minimal NA NA AUUUA UAUU minimal chr19 - 23402069 23402095 NoAnnotation G8057.1 TATTTTAATAAATTTCTTATATATTT 6 2 5 80 0.833333333 0.698970004 0 0 0 6 1 0 5 chr19:23402069-23402095 minimal NA NA NA UAUU minimal chr19 - 23402760 23402789 NoAnnotation G8058.1 TTTTTCTTTCTCATTTAAATTTACTTAAT 2 2 2 29 1 0.301029996 0 0 0 2 0 0 2 chr19:23402760-23402789 minimal NA NA AUUUA NA minimal chr19 - 23402857 23402904 NoAnnotation G8059.1 TAACAATATATTATTTGTTAACATAATAAAGTAGTATTTGTAGTAAT 9 4 9 80 1 0.954242509 0 0.125 0.222222222 7 0 0 9 chr19:23402857-23402904 minimal NA NA NA UAUU minimal chr19 - 23402998 23403019 NoAnnotation G8060.1 ACTTAACTTTTTAATTTAACG 6 5 6 54 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr19:23402998-23403019 minimal NA NA AUUUA NA minimal chr19 - 23403103 23403125 NoAnnotation G8061.1 AAAAATATTTTTAATTTTAGTT 4 2 4 43 1 0.602059991 0 0.5 0.75 1 0 0 4 chr19:23403103-23403125 NA NA NA NA UAUU minimal chr19 - 23521356 23521384 NoAnnotation G8063.1 TTAGTTTTATACTTTTATATATTTTAAT 4 3 4 57 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:23521356-23521384 minimal NA NA NA UAUU minimal chr19 - 23834459 23834487 NoAnnotation G8064.1 TTAAAATTAGTAAATTATTTTACTAATT 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:23834459-23834487 minimal NA NA NA UAUU minimal chr19 - 23924705 23924730 3'utr ZNF681 Ensembl G8065.1 AATTATTACTCATTTTTTCTTATTT 5 4 5 73 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:23924705-23924730 minimal NA NA NA UAUU minimal chr19 - 24184093 24184147 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G8073.1 TGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAG 3742 10 3099 26225 0.789152024 1.221708632 0.259230965 0.385496183 0.959001783 161 643 185 3099 chr19:24184093-24184147 NA NA NA NA UAUU minimal chr19 - 24184749 24184794 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G8076.1 AAACTCTGGTGGGGGTCTGTAGTGGTCCTGACGTGCAAATCGGTC 130 2 126 533 0.893617021 1.021189299 0.070921986 0.5 0.943262411 8 4 11 126 chr19:24184749-24184794 NA NA NA NA NA NA chr19 - 24184953 24184990 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G8078.1 CACGAAAGCCACTGTGGCGCAATGAAGGTGAAGGCTG 9 2 8 22 0.571428571 0.124938737 0 0.375 0.642857143 5 1 5 8 chr19:24184953-24184990 NA NA NA NA NA NA chr19 - 24185781 24185809 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G8081.1 AGTTCAAGAGGGCGTGAAACCGTTAAGA 397 4 14 1918 0.028571429 -0.826999818 0.006122449 0.294117647 0.853061224 72 383 93 14 chr19:24185781-24185809 NA NA NA NA NA NA chr19 - 29031225 29031250 lincRNA AC005394.1 Ensembl G8086.1 TTAAATTTACTCTCATATATTTATA 9 4 5 100 0.555555556 0.698970004 0 0.285714286 0.444444444 5 4 0 5 chr19:29031225-29031250 minimal NA NA AUUUA UAUU minimal chr19 - 29107255 29107282 lincRNA AC005394.1 Ensembl G8087.1 ATACTAAATACTAAATTAATATTTATT 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:29107255-29107282 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 218615645 218615665 3'utr TGFB2 Ensembl G809.1 TAACCATACCTATATTATTA 5 2 5 35 1 0.698970004 0 0.5 0.8 1 0 0 5 chr1:218615645-218615665 minimal NA NA NA UAUU minimal chr19 - 31766526 31766552 3'utr TSHZ3 Ensembl G8093.1 TTTAAATTATACATATTTATTAGCAT 4 2 4 44 1 0.602059991 0 0 0 4 0 0 4 chr19:31766526-31766552 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 33425866 33425892 intron CEP89 Ensembl G8095.1 TCTTTTTAAATATAATTTTATTTATT 2 2 2 32 1 0.301029996 0 0 0 2 0 0 2 chr19:33425866-33425892 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 33461933 33461961 repeat LINE-L2c RepeatMasker G8096.1 ATTCTTATATTTATTTATTATTTAATTT 15 8 13 228 0.866666667 1.113943352 0 0.071428571 0.133333333 13 2 0 13 chr19:33461933-33461961 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 35224232 35224258 NoAnnotation G8098.1 AATTTTTTACTTTATTTTTAATATTT 3 2 3 51 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:35224232-35224258 minimal NA NA NA UAUU minimal chr19 - 35442610 35442635 NoAnnotation G8103.1 TCCTTTTCTTTCATCTCTATTTTAT 4 3 4 55 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:35442610-35442635 minimal NA NA NA UAUU minimal chr19 - 36667708 36667738 NoAnnotation G8107.1 ATATCTTATTATTCATTCCTTATTAGCTAG 10 2 10 133 1 1 0 0.285714286 0.5 5 0 0 10 chr19:36667708-36667738 minimal NA NA NA UAUU minimal chr19 - 36816441 36816464 lincRNA AC092296.1 Ensembl G8110.1 ATTAATTCTTTTTCTTAATTTTG 10 7 8 133 0.8 0.903089987 0 0.111111111 0.2 8 2 0 8 chr19:36816441-36816464 NA NA NA NA NA NA chr19 - 36816802 36816827 lincRNA AC092296.1 Ensembl G8111.1 CAAAAATATCACAAACTAATTTATT 23 3 18 151 0.782608696 1.255272505 0 0.555555556 0.826086957 4 5 0 18 chr19:36816802-36816827 minimal NA NA AUUUA UAUU minimal chr19 - 36874588 36874618 NoAnnotation G8113.1 CTTTCATTATTACCTAATAATCTTTTAAAT 8 4 6 79 0.666666667 0.477121255 0.111111111 0.125 0.222222222 7 2 1 6 chr19:36874588-36874618 minimal NA NA NA UAUU minimal chr19 - 36874666 36874690 NoAnnotation G8114.1 ACTTACCTTCTCCCATATTGTATT 8 4 7 61 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr19:36874666-36874690 NA NA NA NA UAUU minimal chr19 - 36875150 36875178 NoAnnotation G8116.1 TCCTATCTTTTATATATACATTATATGT 4 3 3 46 0.75 0.477121255 0 0 0 4 1 0 3 chr19:36875150-36875178 minimal NA NA NA NA NA chr19 - 36937029 36937058 3'utr ZNF566 Ensembl G8120.1 CTAAAACATTAACACACAATTATTTTATT 6 3 4 52 0.666666667 0.602059991 0 0 0 6 2 0 4 chr19:36937029-36937058 minimal NA NA NA UAUU minimal chr19 - 36939411 36939439 3'utr ZNF566 Ensembl G8122.1 TATACTATTTTAAAAATACCTTTAGTAC 5 2 4 51 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr19:36939411-36939439 NA NA NA NA UAUU minimal chr19 - 36939474 36939499 3'utr ZNF566 Ensembl G8123.1 TATTTTAATCCATATTAAATTTATA 9 5 7 83 1 0.954242509 0 0.5 0.666666667 3 0 0 9 chr19:36939474-36939499 minimal NA NA AUUUA UAUU minimal chr19 - 37001686 37001709 3'utr ZNF260 Ensembl G8125.1 CAACATAATATTCTCTAATATTG 9 3 8 70 0.8 0.602059991 0 0.142857143 0.4 6 1 1 8 chr19:37001686-37001709 NA NA NA NA UAUU minimal chr19 - 37002064 37002090 3'utr ZNF260 Ensembl G8126.1 ATTTTAAATATATTAATTTCTTTTAA 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr19:37002064-37002090 NA NA NA NA UAUU minimal chr19 - 37003131 37003153 3'utr ZNF260 Ensembl G8127.1 ATATTTCTAAAATCTTATCTTT 3 2 3 31 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:37003131-37003153 minimal NA NA NA UAUU minimal chr19 - 37006383 37006417 5'utr ZNF260 Ensembl G8128.1 AAACCTAATTTATATACAATCTATACCTAAATAT 5 2 4 39 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr19:37006383-37006417 minimal NA NA AUUUA NA minimal chr19 - 37006634 37006655 intron ZNF260 Ensembl G8129.1 CACTATATATTATATTAACTT 3 2 2 12 1 0.477121255 0 0 0 3 0 0 3 chr19:37006634-37006655 minimal NA NA NA UAUU minimal chr1 + 219385918 219385939 3'utr LYPLAL1 Ensembl G813.1 CATACATAATCTAATTTTATT 5 3 3 47 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:219385918-219385939 minimal NA NA NA UAUU minimal chr19 - 37010423 37010447 intron ZNF260 Ensembl G8130.1 TATACATTTTTCTTTTTATTTATA 6 3 4 87 0.666666667 0.602059991 0 0.2 0.333333333 4 2 0 4 chr19:37010423-37010447 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 37035096 37035119 3'utr ZNF529 Ensembl G8132.1 AAACCATAATATAATTATTATTG 4 3 3 32 0.75 0.477121255 0 0 0 4 1 0 3 chr19:37035096-37035119 minimal NA NA NA UAUU minimal chr19 - 37035450 37035472 3'utr ZNF529 Ensembl G8133.1 ATCTCATTCTCCCTTTTTATCC 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr19:37035450-37035472 minimal NA NA NA NA NA chr19 - 37035498 37035526 3'utr ZNF529 Ensembl G8134.1 CTCTATTTCTAACTAAATTCTATTTATG 40 9 36 466 0.87804878 1.255272505 0 0.416666667 0.658536585 14 4 1 36 chr19:37035498-37035526 minimal NA NA AUUUA UAUU minimal chr19 - 37035762 37035786 3'utr ZNF529 Ensembl G8135.1 TCATTCATTACATTTTAATTTTTG 7 4 6 83 0.857142857 0.77815125 0 0 0 7 1 0 6 chr19:37035762-37035786 NA NA NA NA NA NA chr19 - 37035805 37035825 3'utr ZNF529 Ensembl G8136.1 AAAATTTTACTATTATTTTC 3 2 2 31 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:37035805-37035825 minimal NA NA NA UAUU minimal chr19 - 37037221 37037248 3'utr ZNF529 Ensembl G8138.1 ACTTCTCTTTAAATTTCTACTTTATTT 5 3 5 64 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:37037221-37037248 minimal NA NA NA UAUU minimal chr19 - 37037379 37037405 3'utr ZNF529 Ensembl G8139.1 ATATCTATACTTACTTATTTTCCTCC 38 10 31 438 0.815789474 1.491361694 0 0.55 0.763157895 9 7 0 31 chr19:37037379-37037405 minimal NA NA NA UAUU minimal chr1 + 219429580 219429604 NoAnnotation G814.1 ACTATTTTAATTTTCTATTTATCC 8 4 8 103 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr1:219429580-219429604 minimal NA NA AUUUA UAUU minimal chr19 - 37037553 37037575 3'utr ZNF529 Ensembl G8141.1 CCAAATATTTCTCCTTTTTATG 10 5 9 101 0.9 0.954242509 0 0.111111111 0.2 8 1 0 9 chr19:37037553-37037575 minimal NA NA NA UAUU minimal chr19 - 37040276 37040302 intron ZNF529 Ensembl G8142.1 ATTTACTTTTCCTCTAATTAATTATC 7 3 7 80 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr19:37040276-37040302 minimal NA NA AUUUA NA minimal chr19 - 37073737 37073758 NoAnnotation G8147.1 TTTTCTATTTTATTAATTATG 5 4 5 65 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:37073737-37073758 minimal NA NA NA UAUU minimal chr1 + 219438282 219438311 repeat Low_complexity-AT_rich RepeatMasker G815.1 TCTTTTTAAAAATATCTAATTTATTTATT 3 2 2 46 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:219438282-219438311 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 37129457 37129490 3'utr ZNF461 Ensembl G8150.1 TTTCATTAGTATTTATTTATTTAAATAATCCTT 16 9 11 219 0.6875 1.041392685 0 0.142857143 0.25 12 5 0 11 chr19:37129457-37129490 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 37141712 37141737 intron ZNF461 Ensembl G8151.1 TATTTTTCTTATTTATCATATTTAT 3 3 3 44 1 0.477121255 0 0 0 3 0 0 3 chr19:37141712-37141737 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 37219489 37219516 NoAnnotation G8152.1 TTTCAAATATAAATTATTTTTATATTT 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:37219489-37219516 minimal NA NA NA UAUU minimal chr19 - 37236154 37236177 NoAnnotation G8153.1 TTTAAAAAATTTAACACTTCTCT 4 3 4 32 1 0.602059991 0 0 0 4 0 0 4 chr19:37236154-37236177 minimal NA NA AUUUA NA minimal chr19 - 37236178 37236206 NoAnnotation G8154.1 TATTTCATTCTATTTAAATTACACTTGC 9 5 8 105 0.888888889 0.903089987 0 0 0 9 1 0 8 chr19:37236178-37236206 minimal NA NA AUUUA UAUU minimal chr19 - 37247421 37247444 repeat LINE-L1ME3C RepeatMasker G8157.1 TAACTATATAACTATCCTTTATC 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr19:37247421-37247444 minimal NA NA NA NA NA chr19 - 37379107 37379133 3'utr ZNF829 Ensembl G8160.1 CACAATTTATAATTTCATTTCTATTT 11 5 9 127 0.75 0.653212514 0 0.2 0.333333333 8 2 1 9 chr19:37379107-37379133 minimal NA NA AUUUA UAUU minimal chr19 - 37381792 37381813 3'utr ZNF829 Ensembl G8161.1 TAATTTCCTTTTATACATAAG 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:37381792-37381813 minimal NA NA NA NA NA chr19 - 37638620 37638644 NoAnnotation G8164.1 ATTTATATATTTTAATTTTATATG 8 6 8 107 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr19:37638620-37638644 minimal NA NA AUUUA UAUU minimal chr19 - 37638960 37638990 repeat LINE-L1ME1 RepeatMasker G8165.1 CTTCTTATACTATTAACCATACATTTATCA 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr19:37638960-37638990 minimal NA NA AUUUA UAUU minimal chr19 - 37640267 37640289 NoAnnotation G8167.1 TAACAATATTATAATACTTACG 6 2 6 42 1 0.77815125 0 1 1 0 0 0 6 chr19:37640267-37640289 minimal NA NA NA UAUU minimal chr19 - 37640289 37640313 NoAnnotation G8168.1 ATTATTTCTCTTATATATTTATTG 52 11 36 719 0.692307692 1.556302501 0 0.52 0.769230769 12 16 0 36 chr19:37640289-37640313 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 37672537 37672561 NoAnnotation G8170.1 ACTTATTTATCCATTCACCTACTG 3 2 3 26 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:37672537-37672561 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 37673120 37673151 NoAnnotation G8171.1 ACTTTCAATAATTTCTCCTTTATATTTATTG 39 11 33 561 0.825 1.217483944 0 0.321428571 0.525 19 6 1 33 chr19:37673120-37673151 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 37674529 37674550 repeat LINE-L2a RepeatMasker G8172.1 CACAATTCTTTATTTTATCTG 4 3 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr19:37674529-37674550 minimal NA NA NA UAUU minimal chr19 - 38051183 38051208 NoAnnotation G8174.1 TTTATTTATATTTTTATTTTTTTCG 4 2 3 67 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr19:38051183-38051208 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 38056107 38056134 coding ZNF571 Ensembl G8176.1 CCTTTATTTCTAATTCTAATCTTATTC 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:38056107-38056134 minimal NA NA NA UAUU minimal chr19 - 38123547 38123568 repeat DNA-MER33 RepeatMasker G8177.1 TATCTCAATTTTTCATATTGA 5 2 3 52 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr19:38123547-38123568 NA NA NA NA UAUU minimal chr19 - 38131316 38131354 intron ZFP30 Ensembl G8179.1 CTTATTAATTTTATTAGTTAATATTAAATTATATAGTA 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:38131316-38131354 minimal NA NA NA UAUU minimal chr19 - 38195486 38195517 intron ZNF607 Ensembl G8181.1 TAATTCTTTATTAGTTAGTATTCCATAAAAG 4 2 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:38195486-38195517 minimal NA NA NA UAUU minimal chr19 - 38219752 38219773 NoAnnotation G8182.1 TTCATATATCATTCTCCTCTG 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:38219752-38219773 NA NA NA NA NA NA chr19 - 38219793 38219818 NoAnnotation G8183.1 CTAACTTCTTATATTTTTTCAAATC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:38219793-38219818 minimal NA NA NA UAUU minimal chr19 - 38220349 38220376 NoAnnotation G8185.1 TCCATCTAAAAATATAATTATTTTTTT 6 5 6 58 1 0.77815125 0 0 0 6 0 0 6 chr19:38220349-38220376 minimal NA NA NA UAUU minimal chr19 - 39327121 39327147 3'utr HNRNPL Ensembl G8189.1 TAACCTTCACTTTTAAAAAATTATTG 3 2 2 27 0.5 0 0 0 0 4 1 1 2 chr19:39327121-39327147 minimal NA NA NA UAUU minimal chr1 + 222153361 222153382 lincRNA RP11-400N13.2 Ensembl G819.1 TTTTAACTGTGATAAACTACA 29 2 11 204 0.041353383 -1.335184272 0 0.875 0.996240602 1 18 237 11 chr1:222153361-222153382 NA NA NA NA NA NA chr19 - 40305153 40305178 repeat SINE-AluJr RepeatMasker G8197.1 TAAAACACTTTTAACTTATTTTAAG 10 4 10 89 1 1 0 0.285714286 0.5 5 0 0 10 chr19:40305153-40305178 minimal NA NA NA UAUU minimal chr19 - 40307771 40307811 NoAnnotation G8200.1 ATTTGTCCCTTCTATCATACTTCACTTATTTTATTTATAC 13 5 8 165 0.571428571 0.602059991 0 0.166666667 0.285714286 10 5 1 8 chr19:40307771-40307811 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 40488907 40488930 NoAnnotation G8207.1 CTTATATTTAATATTTTATATTG 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr19:40488907-40488930 minimal NA NA AUUUA UAUU minimal chr19 - 40489152 40489177 NoAnnotation G8208.1 TAATTTTAACTATTTATATCTCATA 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:40489152-40489177 minimal NA NA AUUUA UAUU minimal chr19 - 40536935 40536957 3'utr ZNF780B Ensembl G8211.1 ACTACTTAATTCTATCTTTTAC 7 3 7 70 1 0.84509804 0 0.333333333 0.714285714 2 0 0 7 chr19:40536935-40536957 NA NA NA NA NA NA chr19 - 40553771 40553794 intron ZNF780B Ensembl G8213.1 ATTTTACATATATTACCTTATTT 3 2 2 36 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:40553771-40553794 minimal NA NA NA UAUU minimal chr19 - 40576085 40576107 3'utr ZNF780A Ensembl G8217.1 TTTATTATATATTTATATATTG 7 5 7 84 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr19:40576085-40576107 minimal NA NA AUUUA UAUU minimal chr19 - 40576171 40576195 3'utr ZNF780A Ensembl G8218.1 ATACATTTAATTATATAATCCCCT 8 4 8 65 1 0.903089987 0 0.333333333 0.5 4 0 0 8 chr19:40576171-40576195 minimal NA NA AUUUA NA minimal chr19 - 40577003 40577030 3'utr ZNF780A Ensembl G8219.1 ACTACTTAATTCTATTTCTTAACATTT 7 5 7 80 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr19:40577003-40577030 NA NA NA NA UAUU minimal chr19 - 40805176 40805198 NoAnnotation G8221.1 CATTTAATATTTATTAATATTC 5 4 4 55 0.8 0.602059991 0 0 0 5 1 0 4 chr19:40805176-40805198 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 40805222 40805245 NoAnnotation G8222.1 TTCATTTTATAATCATTTAATAT 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr19:40805222-40805245 minimal NA NA AUUUA NA minimal chr19 - 40820506 40820534 NoAnnotation G8224.1 TCTCTTCTCCTCATTTAGTAACTTAGTC 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr19:40820506-40820534 minimal NA NA AUUUA NA minimal chr19 - 40822649 40822677 NoAnnotation G8228.1 AACACATTATTACATTACATTATTTAAG 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:40822649-40822677 minimal NA NA AUUUA UAUU minimal chr19 - 40824134 40824160 NoAnnotation G8229.1 CCTTTTAAAAATTTTTATTTTATTTT 11 7 10 161 0.909090909 1 0 0.125 0.363636364 7 1 0 10 chr19:40824134-40824160 minimal NA NA NA UAUU minimal chr19 - 42702713 42702735 NoAnnotation G8235.1 ACTCTTTATTTATTATTTAATT 3 2 3 37 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:42702713-42702735 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 44093730 44093758 repeat LINE-L2a RepeatMasker G8239.1 TAAATATTTATTATTATTATTATTATTT 3 2 3 51 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr19:44093730-44093758 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 44152762 44152790 3'utr PLAUR Ensembl G8241.1 TTATTAATTAATATTCATATTATTTATT 4 2 4 59 1 0.602059991 0 0 0 4 0 0 4 chr19:44152762-44152790 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 44376558 44376581 repeat SINE-MIR RepeatMasker G8243.1 CTTACTAAATACATTATTTTTAT 11 4 9 115 0.818181818 0.954242509 0 0.25 0.454545455 6 2 0 9 chr19:44376558-44376581 minimal NA NA NA UAUU minimal chr19 - 44416532 44416557 repeat LINE-L1M5 RepeatMasker G8245.1 CTAACATTCTTTTTTTAATTAGGGA 5 2 5 55 1 0.698970004 0 0.333333333 0.6 2 0 0 5 chr19:44416532-44416557 NA NA NA NA NA NA chr19 - 44416727 44416754 NoAnnotation G8246.1 ATTTCTATACCATAAATTAATTAGGTC 8 4 7 72 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr19:44416727-44416754 NA NA NA NA NA NA chr19 - 44609629 44609649 NoAnnotation G8248.1 ACAATAATAAAATTAATATG 9 2 9 45 1 0.954242509 0 0.5 0.888888889 1 0 0 9 chr19:44609629-44609649 NA NA NA NA NA NA chr1 + 222907919 222907955 3'utr BROX Ensembl G825.1 AATAACTAAACAGACATTTAATTTTATTTCAATATC 4 3 3 42 0.75 0.477121255 0.25 0 0 4 1 0 3 chr1:222907919-222907955 minimal NA NA AUUUA UAUU minimal chr19 - 44800917 44800941 intron ZNF235 Ensembl G8252.1 ATTTTAATATTTTTATATTTATTA 3 2 3 45 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:44800917-44800941 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 44937158 44937179 intron ZNF229 Ensembl G8255.1 GGTAGTTCAGTTGGTTAGAAT 6 2 4 42 0.444444444 0 0.888888889 0.285714286 0.444444444 5 2 3 4 chr19:44937158-44937179 NA NA NA NA NA NA chr19 - 44974127 44974152 repeat SINE-MIR RepeatMasker G8256.1 TTATTTATTAAAATCACAGGACCTA 3 2 3 24 1 0.477121255 0 0 0 3 0 0 3 chr19:44974127-44974152 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 44980574 44980601 3'utr ZNF180 Ensembl G8257.1 ATTTCTTCCTTTTTATTTCATTCTTTT 4 4 4 64 1 0.602059991 0 0 0 4 0 0 4 chr19:44980574-44980601 minimal NA NA NA UAUU minimal chr19 - 46213891 46213912 3'utr FBXO46 Ensembl G8259.1 CCTTTCTATAAAATCAATATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr19:46213891-46213912 NA NA NA NA UAUU minimal chr19 - 46287006 46287031 3'utr DMWD Ensembl G8262.1 TCCCGCAGGACCTCTTATTTATACT 4 2 4 27 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:46287006-46287031 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 46358791 46358818 intron SYMPK Ensembl G8263.1 TCTTTTTCCTTTATTTATATTTATATG 2 2 2 33 1 0.301029996 0 0 0 2 0 0 2 chr19:46358791-46358818 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 47222879 47222915 3'utr STRN4 Ensembl G8264.1 TCTCCACTCTTTCCCTCTATTTATTTCACTCTCTTG 5 4 5 57 0.714285714 0.22184875 0 0.166666667 0.285714286 5 0 2 5 chr19:47222879-47222915 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 47567539 47567565 3'utr ZC3H4 Ensembl G8267.1 ACTATTTCACACCCTTTTTATACTCC 7 5 7 62 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr19:47567539-47567565 minimal NA NA NA UAUU minimal chr19 - 48713338 48713360 3'utr CARD8 Ensembl G8273.1 TATTTATCTTTAGTTTTTAGCC 5 4 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:48713338-48713360 minimal NA NA AUUUA UAUU minimal chr19 - 48714449 48714469 3'utr CARD8 Ensembl G8275.1 ACTTTAACACTTTATCTATG 5 2 3 42 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr19:48714449-48714469 minimal NA NA NA NA NA chr19 - 52393105 52393129 3'utr ZNF649 Ensembl G8292.1 TTTAAATTACTAACTTACTATTTG 13 4 12 130 0.923076923 1.079181246 0 0.222222222 0.461538462 7 1 0 12 chr19:52393105-52393129 NA NA NA NA UAUU minimal chr19 - 52393285 52393311 3'utr ZNF649 Ensembl G8293.1 TTATATCTTTCATATCTTTATTTATC 15 8 13 213 0.8125 0.812913357 0 0.142857143 0.25 12 2 1 13 chr19:52393285-52393311 UUAUUUAU NA NA AUUUA UAUU minimal chr19 - 52393328 52393352 3'utr ZNF649 Ensembl G8294.1 TAATTTTTAACCTCTAATAATTTG 6 4 5 59 0.833333333 0.698970004 0 0 0 6 1 0 5 chr19:52393328-52393352 NA NA NA NA NA NA chr1 + 224346801 224346828 3'utr FBXO28 Ensembl G830.1 TATTTTAATTTACTAAATTATGTAGCT 34 10 30 385 0.857142857 1.176091259 0.428571429 0.333333333 0.6 14 4 1 30 chr1:224346801-224346828 minimal NA NA AUUUA UAUU minimal chr19 - 53300818 53300847 3'utr ZNF28 Ensembl G8300.1 TTTTAATTTTATTTTAAAATTATTTAATG 2 2 2 32 1 0.301029996 0 0 0 2 0 0 2 chr19:53300818-53300847 minimal NA NA AUUUA UAUU minimal chr19 - 53341949 53341979 3'utr ZNF468 Ensembl G8302.1 TTTTTAATTTTCTTTTAAAATTATTTATTG 3 2 2 47 0.666666667 0.301029996 0 0 0 3 1 0 2 chr19:53341949-53341979 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 53742596 53742623 intron ZNF677 Ensembl G8304.1 ATTCTCAACATATTATTTTTCCTATTG 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr19:53742596-53742623 minimal NA NA NA UAUU minimal chr19 - 54659399 54659419 3'utr LENG1 Ensembl G8306.1 TCATATAAAACTATTTATTC 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr19:54659399-54659419 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr19 - 55390045 55390076 repeat LINE-L1PREC2 RepeatMasker G8308.1 CGGAAGTCGGAATCTGCTAAGGAGTGTGTAA 3131 2 3128 15695 0.993331216 2.216513143 0.020006351 0.622222222 0.994601461 17 3 18 3128 chr19:55390045-55390076 NA NA NA NA NA NA chr1 + 224347059 224347083 3'utr FBXO28 Ensembl G831.1 CTTTTTCTATCCATTTTTAATATT 10 8 10 138 1 1 0.5 0.111111111 0.2 8 0 0 10 chr1:224347059-224347083 NA NA NA NA UAUU minimal chr19 - 55877201 55877222 3'utr IL11 Ensembl G8311.1 CCTTATTTATACTTATTTATT 3 3 3 35 1 0.477121255 0 0 0 3 0 0 3 chr19:55877201-55877222 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr19 - 56893428 56893448 NoAnnotation G8315.1 CTACTAACCCTCTATTTATG 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr19:56893428-56893448 minimal NA NA AUUUA UAUU minimal chr19 - 57973602 57973625 NoAnnotation G8317.1 ACTAAACTAACTCATTTTATTTT 5 3 5 44 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:57973602-57973625 minimal NA NA NA UAUU minimal chr19 - 57980957 57980982 3'utr ZNF772 Ensembl G8318.1 AATAATAAATATTTCCTATTTTATG 11 3 8 107 0.727272727 0.903089987 0 0.375 0.545454545 5 3 0 8 chr19:57980957-57980982 minimal NA NA NA UAUU minimal chr19 - 57981995 57982020 3'utr ZNF772 Ensembl G8319.1 ATTTATCAATTTTACAATTTTATTG 5 3 5 60 1 0.698970004 0 0.25 0.4 3 0 0 5 chr19:57981995-57982020 minimal NA NA AUUUA UAUU minimal chr1 + 224347673 224347697 3'utr FBXO28 Ensembl G832.1 CATACACTTATAATCATCTATTCA 11 4 11 86 0.916666667 0.740362689 0 0.375 0.583333333 5 0 1 11 chr1:224347673-224347697 minimal NA NA NA UAUU minimal chr19 - 58054001 58054023 3'utr AC003682.1 Ensembl G8322.1 ATTAAATTATTTTTAAATTATG 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr19:58054001-58054023 minimal NA NA NA UAUU minimal chr19 - 58413927 58413947 NoAnnotation G8324.1 AACATATTTATATTTACCTC 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr19:58413927-58413947 minimal NA NA AUUUA UAUU minimal chr19 - 58451876 58451902 NoAnnotation G8326.1 AAATTATATATTATTAACTTTAGTTC 5 2 4 56 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr19:58451876-58451902 minimal NA NA NA UAUU minimal chr1 + 224348771 224348795 3'utr FBXO28 Ensembl G833.1 TTCCTTATTCTTAATAAACTTTTT 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr1:224348771-224348795 minimal NA NA NA UAUU minimal chr2 + 3251685 3251706 NoAnnotation G8331.1 ATTAATTCTTCTTATTTATCT 6 2 2 74 0.333333333 0.301029996 0 0.5 0.666666667 2 4 0 2 chr2:3251685-3251706 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 224348920 224348946 repeat Low_complexity-AT_rich RepeatMasker G834.1 TCTATTTCCAACATTATATAATTTTA 13 7 11 129 0.846153846 1.041392685 0 0.2 0.384615385 8 2 0 11 chr1:224348920-224348946 minimal NA NA NA UAUU minimal chr2 + 15757598 15757624 repeat Low_complexity-AT_rich RepeatMasker G8352.1 ATATTTTCATATACTTTTTATTTATA 3 2 3 40 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:15757598-15757624 UUAUUUAU NA NA AUUUA UAUU minimal chr1 + 224380888 224380916 3'utr DEGS1 Ensembl G836.1 TATTTCACTATCTTTATACTATATAATA 8 4 7 89 0.875 0.84509804 0 0.2 0.5 4 1 0 7 chr1:224380888-224380916 minimal NA NA NA UAUU minimal chr2 + 20873323 20873347 3'utr GDF7 Ensembl G8364.1 TTATTTTGAGGAAGGTCTGGGGTA 7 6 7 44 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr2:20873323-20873347 minimal NA NA NA UAUU minimal chr2 + 20878881 20878902 NoAnnotation G8365.1 CAATCTCTATTTTTCTTAACT 5 4 5 49 1 0.698970004 0 0 0 5 0 0 5 chr2:20878881-20878902 NA NA NA NA UAUU minimal chr2 + 25271593 25271617 repeat LTR-LTR13 RepeatMasker G8372.1 CAATTACTCTCTATTCCAATATTA 6 3 4 56 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr2:25271593-25271617 NA NA NA NA UAUU minimal chr2 + 26359245 26359266 3'utr RAB10 Ensembl G8375.1 AAATACTTTAGAATATTATTA 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:26359245-26359266 minimal NA NA NA UAUU minimal chr2 + 26412316 26412339 3'utr FAM59B Ensembl G8376.1 TCTACCTATTTATTTCCTCCACT 4 2 3 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:26412316-26412339 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 26613086 26613116 3'utr EPT1 Ensembl G8378.1 ACAAACATAAAAATCCCTTTAATTGTAGTG 2 2 2 16 1 0.301029996 1 0 0 2 0 0 2 chr2:26613086-26613116 NA NA NA NA NA NA chr2 + 26613326 26613346 3'utr EPT1 Ensembl G8379.1 TAATTAAATTCATAACTATT 4 3 4 29 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr2:26613326-26613346 NA NA NA NA UAUU minimal chr1 + 224548672 224548699 repeat Simple_repeat-(TTTA)n RepeatMasker G838.1 ACTCTTTATTTATTTATTTATTTATTG 5 4 4 86 0.8 0.602059991 1 0 0 5 1 0 4 chr1:224548672-224548699 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 27019299 27019319 NoAnnotation G8380.1 TTTTTAATATCCAATTAACT 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:27019299-27019319 NA NA NA NA NA NA chr2 + 27436212 27436242 intron C2orf28 Ensembl G8382.1 CCTGGCTGCTTTTATACCCTTATATTATTT 4 2 4 49 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:27436212-27436242 minimal NA NA NA UAUU minimal chr2 + 27845331 27845358 3'utr ZNF512 Ensembl G8383.1 AATATTGTCCTATCCTCTTTTATATAT 3 2 2 34 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:27845331-27845358 minimal NA NA NA UAUU minimal chr2 + 27845404 27845424 3'utr ZNF512 Ensembl G8384.1 ATATTTATCTGGAGCTGGAA 7 3 7 42 1 0.84509804 0 0.666666667 0.857142857 1 0 0 7 chr2:27845404-27845424 minimal NA NA AUUUA UAUU minimal chr2 + 28002540 28002563 3'utr MRPL33 Ensembl G8386.1 CATCACATTTATTTATCTTTCTG 13 5 12 140 0.923076923 1.079181246 0.230769231 0.333333333 0.538461538 6 1 0 12 chr2:28002540-28002563 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 29022887 29022908 3'utr PPP1CB Ensembl G8387.1 CACTCTAATTTTTAACTTATT 7 4 6 70 0.857142857 0.77815125 0.714285714 0.166666667 0.285714286 5 1 0 6 chr2:29022887-29022908 minimal NA NA NA UAUU minimal chr2 + 29122056 29122080 intron WDR43 Ensembl G8389.1 CCTACCTTTTTATTACTTAATATA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:29122056-29122080 minimal NA NA NA UAUU minimal chr2 + 29406355 29406379 3'utr CLIP4 Ensembl G8399.1 GATTATTTCTTAAAAACTCTATTT 7 2 6 76 0.75 0.477121255 0 0.6 0.75 2 1 1 6 chr2:29406355-29406379 minimal NA NA NA UAUU minimal chr2 + 30685998 30686021 repeat Low_complexity-AT_rich RepeatMasker G8401.1 TAATATTTATACATTTATATATT 3 3 3 34 1 0.477121255 0 0 0 3 0 0 3 chr2:30685998-30686021 minimal NA NA AUUUA UAUU minimal chr2 + 30696352 30696375 intron LCLAT1 Ensembl G8402.1 TTTTTTCATCCCTTTATTTATTC 4 2 4 56 1 0.602059991 0 0.5 0.75 1 0 0 4 chr2:30696352-30696375 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 32523615 32523644 intron YIPF4 Ensembl G8406.1 CATATAATTTATTTATTTTTTATTTATTT 4 3 3 77 0.75 0.477121255 0 0 0 4 1 0 3 chr2:32523615-32523644 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 32747389 32747413 intron BIRC6 Ensembl G8410.1 TATTCTAATATATATATTTTATTT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr2:32747389-32747413 minimal NA NA NA UAUU minimal chr2 + 37429193 37429214 NoAnnotation G8415.1 CTTTTCTTCTCATATTTATTG 3 2 3 36 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:37429193-37429214 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr1 + 225161512 225161538 repeat Low_complexity-AT_rich RepeatMasker G842.1 TATTTTAAAAATAATTTTTAATATTT 5 3 4 71 0.8 0.602059991 0 0 0 5 1 0 4 chr1:225161512-225161538 NA NA NA NA UAUU minimal chr2 + 44458216 44458245 3'utr PPM1B Ensembl G8420.1 CTTCATATTATTTTACCTATTAGTACACT 22 4 21 248 1 1.342422681 0.227272727 0.444444444 0.772727273 5 0 0 22 chr2:44458216-44458245 minimal NA NA NA UAUU minimal chr2 + 44460932 44460959 3'utr PPM1B Ensembl G8421.1 CCACAATATATTTTATTTATTCTTTAG 7 4 5 72 0.714285714 0.698970004 0.285714286 0.4 0.571428571 3 2 0 5 chr2:44460932-44460959 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 44617509 44617532 intron CAMKMT Ensembl G8423.1 TTTTCTTCTCACTAATATTTATT 4 3 4 45 1 0.602059991 0 0 0 4 0 0 4 chr2:44617509-44617532 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 44627839 44627865 repeat Low_complexity-AT_rich RepeatMasker G8424.1 CTATTAACAAATATTTATATTATTTT 3 3 3 38 1 0.477121255 0 0 0 3 0 0 3 chr2:44627839-44627865 minimal NA NA AUUUA UAUU minimal chr2 + 44734748 44734770 intron CAMKMT Ensembl G8428.1 TAATAATTATTCATATTTATTT 4 4 4 48 1 0.602059991 0 0 0 4 0 0 4 chr2:44734748-44734770 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 46989608 46989628 3'utr SOCS5 Ensembl G8435.1 TATTTCAAAACTTTCATATG 3 2 3 24 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:46989608-46989628 NA NA NA NA UAUU minimal chr2 + 47613550 47613574 intron EPCAM Ensembl G8437.1 CAATATAACTTTTTCTTTTTTTAT 3 2 3 42 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:47613550-47613574 minimal NA NA NA NA NA chr2 + 47613614 47613636 intron EPCAM Ensembl G8438.1 TTCCTTTAATTTCATTTTTATT 4 3 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:47613614-47613636 minimal NA NA NA UAUU minimal chr1 + 225195247 225195271 intron DNAH14 Ensembl G844.1 TAATTCTTTAATTATATCATATTT 8 3 8 93 1 0.903089987 0 0.142857143 0.25 6 0 0 8 chr1:225195247-225195271 minimal NA NA NA UAUU minimal chr2 + 48604476 48604503 3'utr FOXN2 Ensembl G8441.1 ATTATACACATCATCTTAATAACTATT 5 3 5 38 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:48604476-48604503 minimal NA NA NA UAUU minimal chr2 + 54001729 54001749 3'utr CHAC2 Ensembl G8450.1 ATCTTATTTTTAATGTAGTG 3 2 3 30 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:54001729-54001749 minimal NA NA NA UAUU minimal chr2 + 54001752 54001774 3'utr CHAC2 Ensembl G8451.1 ATATTATTTAAACTTTTATTTT 4 3 4 52 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:54001752-54001774 minimal NA NA AUUUA UAUU minimal chr2 + 54045714 54045741 3'utr ERLEC1 Ensembl G8452.1 AACTTTTATCTATTACTTTTTTCTTCT 8 5 8 114 1 0.903089987 0 0.166666667 0.375 5 0 0 8 chr2:54045714-54045741 minimal NA NA NA UAUU minimal chr2 + 54361836 54361861 intron ACYP2 Ensembl G8454.1 TAAACATTTTATTTATTTCATTTAC 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr2:54361836-54361861 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 55748459 55748485 intron CCDC104 Ensembl G8457.1 ATTTTATTTAACTTCATTATTTATCT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr2:55748459-55748485 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 61149745 61149765 3'utr REL Ensembl G8464.1 ATATAATACTATATTTATAC 4 3 4 32 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:61149745-61149765 minimal NA NA AUUUA UAUU minimal chr2 + 61157911 61157935 NoAnnotation G8466.1 AATTTATTATCCTCTAATATTCTT 5 3 3 56 0.5 0.176091259 0.166666667 0.2 0.333333333 4 2 1 3 chr2:61157911-61157935 minimal NA NA AUUUA UAUU minimal chr2 + 61246328 61246351 intron PEX13 Ensembl G8469.1 TAACAATAATATATATTTTATAT 11 3 8 102 0.909090909 1 0 0.5 0.727272727 3 1 0 10 chr2:61246328-61246351 minimal NA NA NA UAUU minimal chr1 + 225270626 225270646 intron DNAH14 Ensembl G847.1 CTATTAATTATTCCATTATT 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr1:225270626-225270646 minimal NA NA NA UAUU minimal chr2 + 63834301 63834321 3'utr MDH1 Ensembl G8480.1 CATTCTAAATAAATATATAT 3 2 2 22 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:63834301-63834321 NA NA NA NA NA NA chr2 + 68405387 68405415 NoAnnotation G8487.1 TATCACATTAATTTATTAATTATTTATT 5 2 2 72 0.4 0.301029996 0.4 0 0 5 3 0 2 chr2:68405387-68405415 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 225345138 225345163 intron DNAH14 Ensembl G849.1 CTTTCATTATTTATTCTTAAATTAT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr1:225345138-225345163 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 70166628 70166657 3'utr MXD1 Ensembl G8493.1 ACACATTAAATCTATAAATACTATTTATT 5 2 5 49 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr2:70166628-70166657 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 70316052 70316074 3'utr PCBP1 Ensembl G8494.1 TTTCTACACAACTTTATCATCC 5 2 4 38 0.8 0.602059991 0 0 0 5 1 0 4 chr2:70316052-70316074 minimal NA NA NA NA NA chr2 + 71588133 71588153 intron ZNF638 Ensembl G8496.1 ATCAACAATATTATTTATTG 5 2 5 40 1 0.698970004 1 0.5 0.8 1 0 0 5 chr2:71588133-71588153 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 71660456 71660479 intron ZNF638 Ensembl G8503.1 TCTTAGAATCAAATTATTTATCT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr2:71660456-71660479 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 73683286 73683309 intron ALMS1 Ensembl G8507.1 TCATATCTTTTTTATTTCTTATT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr2:73683286-73683309 minimal NA NA NA UAUU minimal chr1 + 225977626 225977651 3'utr SRP9 Ensembl G851.1 CCTTATTTCCACATTTAAACTACCT 6 5 6 49 1 0.77815125 0.166666667 0.2 0.333333333 4 0 0 6 chr1:225977626-225977651 minimal NA NA AUUUA UAUU minimal chr2 + 74329587 74329610 3'utr TET3 Ensembl G8512.1 TCTGGGGGGTTTTTATTTTTATT 4 2 2 47 0.75 0.477121255 0.25 0 0 4 1 0 3 chr2:74329587-74329610 minimal NA NA NA UAUU minimal chr2 + 74334984 74335010 NoAnnotation G8515.1 TATTAAACTGTAGATATTCTTAGTAC 5 2 5 47 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr2:74334984-74335010 NA NA NA NA UAUU minimal chr2 + 74335267 74335290 repeat Low_complexity-AT_rich RepeatMasker G8517.1 TTTTAATAAATTTTATATTTATT 8 4 7 112 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr2:74335267-74335290 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 74377198 74377224 NoAnnotation G8520.1 CTTATCTCTAACCTTCCTCTTCCCCA 3 3 3 26 0.75 0.176091259 0 0 0 4 0 1 3 chr2:74377198-74377224 minimal NA NA NA NA NA chr2 + 74441914 74441939 3'utr MTHFD2 Ensembl G8524.1 AAAAACTGCATGTTAATCATTTTCC 4 2 4 26 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:74441914-74441939 NA NA NA NA NA NA chr2 + 74442070 74442091 3'utr MTHFD2 Ensembl G8526.1 ATTCTTTTCTACATTATACAT 3 2 3 30 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr2:74442070-74442091 minimal NA NA NA NA NA chr2 + 74442115 74442138 3'utr MTHFD2 Ensembl G8527.1 CTATATACTTTAACTTCATTGTT 19 7 17 177 0.894736842 1.230448921 0.631578947 0.333333333 0.578947368 8 2 0 17 chr2:74442115-74442138 NA NA NA NA NA NA chr2 + 75192941 75192963 intron POLE4 Ensembl G8532.1 CTTTCTTTAGTTAGTATTTATT 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr2:75192941-75192963 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 75886567 75886588 intron MRPL19 Ensembl G8536.1 TCAATATATTTATCTTATTTT 8 3 8 93 1 0.903089987 0.5 0.5 0.75 2 0 0 8 chr2:75886567-75886588 minimal NA NA AUUUA UAUU minimal chr2 + 75895828 75895848 intron MRPL19 Ensembl G8538.1 TTTCCAACTATTTTCTATTA 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:75895828-75895848 NA NA NA NA UAUU minimal chr2 + 86715172 86715197 intron KDM3A Ensembl G8548.1 CTTATATTTACAATTTTAACATATA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:86715172-86715197 minimal NA NA AUUUA UAUU minimal chr2 + 87002389 87002413 3'utr RMND5A Ensembl G8549.1 TTTATTATATATATATTTTTCCTT 6 4 6 82 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr2:87002389-87002413 minimal NA NA NA UAUU minimal chr1 + 227769285 227769309 intron ZNF678 Ensembl G855.1 CTTCTTTTTCATCCATAATCTAAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:227769285-227769309 NA NA NA NA NA NA chr2 + 99234920 99234942 3'utr UNC50 Ensembl G8554.1 TACATTCCTTAAAACTAATTAA 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr2:99234920-99234942 NA NA NA NA NA NA chr2 + 105474512 105474535 repeat Low_complexity-AT_rich RepeatMasker G8565.1 CTAATATTTTTTTTATTAATATT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr2:105474512-105474535 minimal NA NA NA UAUU minimal chr2 + 105963884 105963910 repeat Low_complexity-AT_rich RepeatMasker G8568.1 TTACTCAATAAAATTAATATTTTATT 10 5 8 104 0.727272727 0.602059991 0 0.222222222 0.363636364 7 2 1 8 chr2:105963884-105963910 minimal NA NA NA UAUU minimal chr2 + 109125340 109125364 3'utr GCC2 Ensembl G8573.1 TTTATACTCTTAATTTAATTTTCT 3 2 2 38 1 0.477121255 0.333333333 0 0 3 0 0 3 chr2:109125340-109125364 minimal NA NA AUUUA NA minimal chr2 + 110955910 110955930 NoAnnotation G8577.1 ACTTTATAAATTATCTAATA 8 3 5 67 0.625 0.698970004 0 0.75 0.875 1 3 0 5 chr2:110955910-110955930 minimal NA NA NA NA NA chr2 + 113404280 113404319 repeat Low_complexity-AT_rich RepeatMasker G8578.1 TTTACAGTATTTAATTTTATATAATATATATTATTTATT 6 6 6 89 1 0.77815125 0 0 0 6 0 0 6 chr2:113404280-113404319 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 113411340 113411383 intron SLC20A1 Ensembl G8579.1 ACCCAAAGTAGAGTTAGCTAAATATTTTTATTATTTATTTATT 6 6 6 82 1 0.77815125 0 0 0 6 0 0 6 chr2:113411340-113411383 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 227844144 227844167 repeat Low_complexity-AT_rich RepeatMasker G858.1 ATATAATTCATATCTCAAATAAC 4 4 4 28 1 0.602059991 0 0 0 4 0 0 4 chr1:227844144-227844167 NA NA NA NA NA NA chr2 + 120862268 120862290 3'utr EPB41L5 Ensembl G8599.1 TTCTTATACACTATTTTAATAT 2 2 2 22 1 0.301029996 0.5 0 0 2 0 0 2 chr2:120862268-120862290 minimal NA NA NA UAUU minimal chr1 + 28871826 28871850 NoAnnotation G86.1 TCTAATATACCTATTCTTATTTTA 13 6 13 140 1 1.113943352 0 0.3 0.461538462 7 0 0 13 chr1:28871826-28871850 minimal NA NA NA UAUU minimal chr1 + 227845790 227845820 repeat Low_complexity-AT_rich RepeatMasker G860.1 TTACTACATTTTATTTAATTAGTATATTTT 20 5 19 233 0.95 1.278753601 0.25 0.285714286 0.5 10 1 0 19 chr1:227845790-227845820 minimal NA NA AUUUA UAUU minimal chr2 + 122523399 122523435 3'utr TSN Ensembl G8602.1 AAAACTTATTTTATATTTTCCCTTCCTTATTTTAAG 22 5 20 270 0.909090909 1.301029996 0.045454545 0.266666667 0.5 11 2 0 20 chr2:122523399-122523435 minimal NA NA NA UAUU minimal chr2 + 127104283 127104303 NoAnnotation G8605.1 CTCTTATTAATATAATTTAG 3 2 2 28 0.666666667 0.301029996 0.666666667 0 0 3 1 0 2 chr2:127104283-127104303 minimal NA NA AUUUA UAUU minimal chr2 + 128461243 128461264 3'utr SFT2D3 Ensembl G8607.1 ATTTATTTTTTTAATTAATTG 4 3 4 52 1 0.602059991 1 0.333333333 0.5 2 0 0 4 chr2:128461243-128461264 minimal NA NA AUUUA UAUU minimal chr2 + 139326884 139326907 3'utr SPOPL Ensembl G8628.1 TTCATATAATACTTTAATTTTTT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:139326884-139326907 NA NA NA NA NA NA chr1 + 227846786 227846818 NoAnnotation G863.1 TAATATATTAGACAATAATAAACATTTACATT 6 2 3 37 0.5 0.477121255 0.166666667 0 0 6 3 0 3 chr1:227846786-227846818 minimal NA NA AUUUA UAUU minimal chr1 + 227846822 227846859 repeat Low_complexity-AT_rich RepeatMasker G864.1 TTTACATTTATATTTAATTTTTCAAATTTAATTTAAA 12 6 9 175 0.75 0.954242509 0 0.2 0.333333333 8 3 0 9 chr1:227846822-227846859 minimal NA NA AUUUA UAUU minimal chr2 + 149254502 149254526 intron MBD5 Ensembl G8640.1 AATCAACTTTTTACTCTAAATTAT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr2:149254502-149254526 minimal NA NA NA NA NA chr2 + 149449935 149449957 repeat LINE-L2c RepeatMasker G8643.1 CAGGAACTATATATTTTATTTT 2 2 2 20 1 0.301029996 0 0 0 2 0 0 2 chr2:149449935-149449957 minimal NA NA NA UAUU minimal chr2 + 149450407 149450430 repeat Low_complexity-AT_rich RepeatMasker G8644.1 TTTTTTTCATTTCATTTTATTCT 4 2 3 55 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr2:149450407-149450430 minimal NA NA NA UAUU minimal chr2 + 152308177 152308197 coding RIF1 Ensembl G8655.1 ACTTCTCACCATATAATATT 5 3 3 37 0.6 0.477121255 0.2 0.25 0.4 3 2 0 3 chr2:152308177-152308197 NA NA NA NA UAUU minimal chr2 + 152331884 152331908 3'utr RIF1 Ensembl G8658.1 CTTTCTTAAACCCGTGCATATTCT 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:152331884-152331908 NA NA NA NA UAUU minimal chr1 + 227848076 227848097 NoAnnotation G866.1 ATAACTTTTCATTTATTTATG 19 5 16 212 0.842105263 1.204119983 0.894736842 0.857142857 0.947368421 1 3 0 16 chr1:227848076-227848097 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 159365415 159365435 intron PKP4 Ensembl G8671.1 TTTCTAAATATTTATTAATC 4 2 2 40 0.5 0.301029996 0 0 0 4 2 0 2 chr2:159365415-159365435 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 160624174 160624194 3'utr MARCH7 Ensembl G8673.1 ATTACTGTAGTCATATTTAT 4 2 4 36 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr2:160624174-160624194 minimal NA NA AUUUA UAUU minimal chr2 + 160624271 160624292 3'utr MARCH7 Ensembl G8674.1 CACCTAATTATTTTTTCTTTT 3 2 2 37 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:160624271-160624292 minimal NA NA NA UAUU minimal chr2 + 162019154 162019185 intron TANK Ensembl G8678.1 TTACTATTAATATCTAATAAATTATATTTAT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr2:162019154-162019185 minimal NA NA AUUUA UAUU minimal chr2 + 162026885 162026911 intron TANK Ensembl G8679.1 TATCAAAATACCTTTATTTATTTATT 5 2 4 58 0.666666667 0.301029996 0 0.5 0.666666667 2 1 1 4 chr2:162026885-162026911 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 162092166 162092190 3'utr TANK Ensembl G8681.1 ATTTACTATATAACTCTTATTTTT 7 4 7 80 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr2:162092166-162092190 minimal NA NA AUUUA UAUU minimal chr2 + 170488893 170488917 intron PPIG Ensembl G8698.1 TTTACTACATAAATCTACATTATT 4 3 4 37 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:170488893-170488917 minimal NA NA NA UAUU minimal chr2 + 170494582 170494605 3'utr PPIG Ensembl G8700.1 CACTTCATACTCTATTCTTTATA 5 4 5 50 1 0.698970004 0.4 0 0 5 0 0 5 chr2:170494582-170494605 minimal NA NA NA UAUU minimal chr2 + 170496906 170496950 3'utr PPIG Ensembl G8702.1 ACAATTCTAATTTATTTTAGTTAGTATATGTAGCAAGTTAGTAT 23 4 22 254 0.916666667 1.041392685 0.333333333 0.285714286 0.583333333 10 1 1 22 chr2:170496906-170496950 minimal NA NA AUUUA UAUU minimal chr2 + 170608323 170608349 repeat Low_complexity-AT_rich RepeatMasker G8704.1 ACTTTATTTATTTAAATCTTTTCTTT 14 5 9 213 0.642857143 0.954242509 0 0.3 0.5 7 5 0 9 chr2:170608323-170608349 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 170668523 170668557 3'utr SSB Ensembl G8706.1 TATTAGTACAAACTAACTAATAAAATATATACTA 11 5 10 60 0.909090909 1 0 0.222222222 0.363636364 7 1 0 10 chr2:170668523-170668557 NA NA NA NA UAUU minimal chr2 + 172633725 172633748 repeat Simple_repeat-(TTTA)n RepeatMasker G8713.1 TATTTCATTTATTTCATTTATTA 4 2 4 56 1 0.602059991 0 0.5 0.75 1 0 0 4 chr2:172633725-172633748 minimal NA NA AUUUA UAUU minimal chr2 + 174091418 174091439 3'utr AC013461.1 Ensembl G8719.1 CACCTACATTAATTATTTTAT 4 2 2 38 0.5 0.301029996 0.25 0.333333333 0.5 2 2 0 2 chr2:174091418-174091439 minimal NA NA NA UAUU minimal chr2 + 174233663 174233688 3'utr CDCA7 Ensembl G8720.1 TACTTAATTCTAATTTTTTCCTCAT 12 5 9 138 0.692307692 0.653212514 0 0.2 0.384615385 8 3 1 9 chr2:174233663-174233688 NA NA NA NA NA NA chr2 + 175206107 175206133 NoAnnotation G8722.1 AAACTTTATTTATTTTAACTCTAATC 3 2 3 35 0.75 0.176091259 0 0 0 4 0 1 3 chr2:175206107-175206133 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 176984208 176984229 3'utr HOXD10 Ensembl G8726.1 TAATTTATTATTTTTTCATCG 5 4 5 59 0.833333333 0.397940009 1 0.2 0.333333333 4 0 1 5 chr2:176984208-176984229 minimal NA NA AUUUA UAUU minimal chr2 + 177037383 177037404 3'utr HOXD3 Ensembl G8728.1 ACCTTAATTTATATTCTCCTT 3 3 3 29 1 0.477121255 0 0 0 3 0 0 3 chr2:177037383-177037404 minimal NA NA AUUUA UAUU minimal chr2 + 177037428 177037448 3'utr HOXD3 Ensembl G8729.1 ACTAAACTATCTGTATTTAT 4 2 3 33 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr2:177037428-177037448 minimal NA NA AUUUA UAUU minimal chr1 + 228285860 228285886 3'utr ARF1 Ensembl G873.1 CCTGCGGCCAGGCTTTTTATTTAATG 4 2 4 34 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr1:228285860-228285886 minimal NA NA AUUUA UAUU minimal chr2 + 178088320 178088340 NoAnnotation G8734.1 TATATAATAATCACAAATTG 3 2 3 18 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:178088320-178088340 NA NA NA NA NA NA chr2 + 179251293 179251314 intron OSBPL6 Ensembl G8737.1 CTATACTCCAATTATTTTTAG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:179251293-179251314 minimal NA NA NA UAUU minimal chr1 + 228285899 228285924 3'utr ARF1 Ensembl G874.1 TTTCCAATGAGGCAGTTTCTGGTAC 13 3 12 90 0.923076923 1.079181246 0.615384615 0.2 0.384615385 8 1 0 12 chr1:228285899-228285924 NA NA NA NA NA NA chr2 + 179409397 179409419 lincRNA AC009948.3 Ensembl G8742.1 CCACATTATAATTTAATATTAT 4 3 3 37 0.75 0.477121255 0 0 0 4 1 0 3 chr2:179409397-179409419 minimal NA NA AUUUA UAUU minimal chr2 + 181874009 181874029 intron UBE2E3 Ensembl G8748.1 ACCTTTTATACTATTTATCT 4 2 4 40 1 0.602059991 0 1 1 0 0 0 4 chr2:181874009-181874029 minimal NA NA AUUUA UAUU minimal chr2 + 181874269 181874292 repeat Low_complexity-AT_rich RepeatMasker G8749.1 CTTTATTATTTTATTTTATTAAT 2 2 2 30 1 0.301029996 0 0 0 2 0 0 2 chr2:181874269-181874292 minimal NA NA NA UAUU minimal chr2 + 181888615 181888639 repeat SINE-MIR RepeatMasker G8751.1 CTATAATCATTACTACTATTATTA 4 3 3 39 0.6 0.176091259 0 0 0 5 1 1 3 chr2:181888615-181888639 minimal NA NA NA UAUU minimal chr2 + 181927915 181927938 3'utr UBE2E3 Ensembl G8753.1 CATTTTAGCCTAATTCATTATCT 7 2 6 68 0.857142857 0.77815125 0.142857143 0.4 0.571428571 3 1 0 6 chr2:181927915-181927938 minimal NA NA NA NA NA chr2 + 183642393 183642417 3'utr DNAJC10 Ensembl G8759.1 CTATCCCTAACCATATATTTATAT 4 2 2 35 0.5 0.301029996 0 0 0 4 2 0 2 chr2:183642393-183642417 minimal NA NA AUUUA UAUU minimal chr1 + 228286688 228286711 3'utr ARF1 Ensembl G876.1 ACAACCTCTACTTTTTTCTTTTG 2 2 2 22 1 0.301029996 1 0 0 2 0 0 2 chr1:228286688-228286711 NA NA NA NA NA NA chr2 + 184026266 184026304 3'utr NUP35 Ensembl G8764.1 TCTTTTAATTTAGATAGTATTTAATATTTTAATTATCC 7 4 6 82 0.875 0.544068044 0.25 0.333333333 0.5 4 0 1 7 chr2:184026266-184026304 minimal NA NA AUUUA UAUU minimal chr2 + 184032096 184032127 repeat Simple_repeat-(TA)n RepeatMasker G8765.1 TTAATACTTAATATACTCCCCTTTATTTATA 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr2:184032096-184032127 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 184307329 184307352 repeat Low_complexity-AT_rich RepeatMasker G8769.1 CAATTACTTTAAAAATATTATTT 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:184307329-184307352 minimal NA NA NA UAUU minimal chr2 + 187542968 187543001 3'utr ITGAV Ensembl G8777.1 TTTTTAGTTAGTATTAATTTATTTTCCTCCATT 4 2 4 50 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:187542968-187543001 minimal NA NA AUUUA UAUU minimal chr2 + 189459379 189459402 3'utr GULP1 Ensembl G8780.1 TTATACTCTAAATATTTAATTTG 4 3 3 42 0.75 0.477121255 0.5 0 0 4 1 0 3 chr2:189459379-189459402 minimal NA NA AUUUA UAUU minimal chr2 + 190324373 190324400 intron WDR75 Ensembl G8781.1 TTTACATAAATAACCTATTTAAATTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:190324373-190324400 minimal NA NA AUUUA UAUU minimal chr2 + 190340194 190340219 3'utr WDR75 Ensembl G8782.1 ATATTCTAAAAACATCTATTTTAAT 5 3 3 48 0.6 0.477121255 0.2 0 0 5 2 0 3 chr2:190340194-190340219 NA NA NA NA UAUU minimal chr2 + 191761041 191761062 intron GLS Ensembl G8790.1 CATATATTTATTATTTATCTT 5 3 5 59 1 0.698970004 0.2 0.333333333 0.6 2 0 0 5 chr2:191761041-191761062 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 191798473 191798497 3'utr GLS Ensembl G8794.1 CTTTTACATTTTATTATCTTAATT 9 5 9 116 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr2:191798473-191798497 minimal NA NA NA UAUU minimal chr2 + 196601810 196601831 3'utr SLC39A10 Ensembl G8800.1 TTTTATATTCTCTCAAAAATG 2 2 2 18 1 0.301029996 1 0 0 2 0 0 2 chr2:196601810-196601831 minimal NA NA NA UAUU minimal chr2 + 198339717 198339739 3'utr COQ10B Ensembl G8804.1 CATCCCTATTTTCTATTTATTG 27 6 22 302 0.814814815 1.342422681 0.851851852 0.363636364 0.740740741 7 5 0 22 chr2:198339717-198339739 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 198415395 198415415 3'utr PHOCN Ensembl G8805.1 ATCATATAATTAACATTATG 6 4 6 42 1 0.77815125 1 0.5 0.666666667 2 0 0 6 chr2:198415395-198415415 minimal NA NA NA NA NA chr2 + 198571952 198571977 3'utr MARS2 Ensembl G8807.1 TTATCTTTTTATTTTTTATTTTCAG 2 2 2 33 1 0.301029996 1 0 0 2 0 0 2 chr2:198571952-198571977 minimal NA NA NA UAUU minimal chr2 + 200215229 200215254 repeat DNA-Kanga2_a RepeatMasker G8808.1 AAAGTAGTATTTCTAAATTAATACT 9 5 6 83 0.6 0.477121255 0.1 0.125 0.3 7 3 1 6 chr2:200215229-200215254 NA NA NA NA UAUU minimal chr2 + 201445157 201445182 intron SGOL2 Ensembl G8815.1 CTTCATATTTATTATTTCCTTCTTT 4 4 4 54 1 0.602059991 0.25 0 0 4 0 0 4 chr2:201445157-201445182 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 201950441 201950463 3'utr NDUFB3 Ensembl G8817.1 ATTTAATCAATTAAAATATATA 13 5 10 107 0.769230769 1 0 0.3 0.461538462 7 3 0 10 chr2:201950441-201950463 minimal NA NA AUUUA NA minimal chr2 + 203168353 203168376 3'utr NOP58 Ensembl G8830.1 ATATACAAATAAAATTTTCTTTG 3 2 3 27 1 0.477121255 1 0.5 0.666666667 1 0 0 3 chr2:203168353-203168376 NA NA NA NA NA NA chr2 + 204089469 204089489 NoAnnotation G8837.1 CCTTATTTATATCTAATTAT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:204089469-204089489 UUAUUUAU NA NA AUUUA UAUU minimal chr2 + 204161768 204161789 3'utr CYP20A1 Ensembl G8838.1 ATTTTTATATATCATATTTTC 4 2 4 48 1 0.602059991 0 0.5 0.75 1 0 0 4 chr2:204161768-204161789 minimal NA NA NA UAUU minimal chr2 + 207179012 207179041 repeat Low_complexity-AT_rich RepeatMasker G8847.1 AAAAGCTATATTTAAATATTCAAATAATT 10 5 7 97 0.7 0.84509804 0 0.111111111 0.2 8 3 0 7 chr2:207179012-207179041 minimal NA NA AUUUA UAUU minimal chr2 + 207655674 207655695 intron FASTKD2 Ensembl G8851.1 CAAATAATATATTTTCATATT 4 3 3 37 0.75 0.477121255 0 0 0 4 1 0 3 chr2:207655674-207655695 NA NA NA NA UAUU minimal chr1 + 229795210 229795234 3'utr URB2 Ensembl G887.1 TTTTTCTTACTATTTTTTAATACA 6 4 5 80 0.833333333 0.698970004 0 0 0 6 1 0 5 chr1:229795210-229795234 NA NA NA NA UAUU minimal chr2 + 217058829 217058854 intron XRCC5 Ensembl G8870.1 TCATTTAATTATCATTTATTTATTG 6 5 5 84 0.833333333 0.698970004 0.666666667 0 0 6 1 0 5 chr2:217058829-217058854 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 217366147 217366170 3'utr RPL37A Ensembl G8871.1 ACATCACTGGCCTATAATAAATG 3 2 3 15 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr2:217366147-217366170 NA NA NA NA NA NA chr1 + 229796083 229796104 NoAnnotation G888.1 TATCTGTCCAAATTCCCTTTT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:229796083-229796104 NA NA NA NA NA NA chr1 + 229796346 229796379 NoAnnotation G889.1 ATTATACATTTTTCACATTTACCATTTTTATTT 12 4 10 137 0.833333333 1 0 0.090909091 0.166666667 10 2 0 10 chr1:229796346-229796379 minimal NA NA AUUUA UAUU minimal chr2 + 228375971 228375994 intron AGFG1 Ensembl G8890.1 TTTTTATTATCCTATTTAAATTG 5 2 5 65 1 0.698970004 1 1 1 0 0 0 5 chr2:228375971-228375994 minimal NA NA AUUUA UAUU minimal chr2 + 228419494 228419519 3'utr AGFG1 Ensembl G8891.1 TACATATTTTTCTTAGAAATTAGCT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:228419494-228419519 NA NA NA NA UAUU minimal chr2 + 228420608 228420629 repeat Low_complexity-AT_rich RepeatMasker G8892.1 ATTTTAATAAATTTAATTATT 3 3 3 32 1 0.477121255 0.333333333 0 0 3 0 0 3 chr2:228420608-228420629 minimal NA NA AUUUA UAUU minimal chr1 + 229796395 229796416 NoAnnotation G890.1 TTATATAATTATCTTTCTTCT 3 3 3 35 1 0.477121255 0.333333333 0 0 3 0 0 3 chr1:229796395-229796416 minimal NA NA NA NA NA chr2 + 231913585 231913608 NoAnnotation G8902.1 CTATCATTTTCTATTTCTTTATT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr2:231913585-231913608 minimal NA NA NA UAUU minimal chr2 + 232837598 232837619 intron DIS3L2 Ensembl G8907.1 CCATATTCTTATTCTATTTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:232837598-232837619 minimal NA NA AUUUA UAUU minimal chr1 + 229796440 229796462 NoAnnotation G891.1 ATATTTACCATTTTTCTTATTC 5 3 4 61 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr1:229796440-229796462 minimal NA NA AUUUA UAUU minimal chr2 + 233603215 233603237 repeat LINE-L2a RepeatMasker G8910.1 ACAAATATTTTACATATTTATT 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr2:233603215-233603237 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 + 233645635 233645658 repeat Low_complexity-AT_rich RepeatMasker G8911.1 ACTTTAATATTTATTATTTATTT 4 3 4 56 1 0.602059991 0.5 0.333333333 0.5 2 0 0 4 chr2:233645635-233645658 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 234204231 234204252 3'utr ATG16L1 Ensembl G8917.1 CACATCTTTTATTTATTTCAT 3 2 2 34 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr2:234204231-234204252 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 235962864 235962884 3'utr SH3BP4 Ensembl G8920.1 TATTTAAAGGTCACTGGGAG 6 2 6 30 1 0.77815125 1 0.5 0.833333333 1 0 0 6 chr2:235962864-235962884 minimal NA NA AUUUA UAUU minimal chr2 + 236852806 236852828 intron AGAP1 Ensembl G8923.1 CCTCTTAAATTATATACTTATT 9 2 6 92 0.666666667 0.77815125 0 0.4 0.666666667 3 3 0 6 chr2:236852806-236852828 minimal NA NA NA UAUU minimal chr2 + 238006583 238006606 3'utr COPS8 Ensembl G8926.1 TTCTCATTTTGTAGTATTTAATA 4 4 4 44 1 0.602059991 0 0 0 4 0 0 4 chr2:238006583-238006606 minimal NA NA AUUUA UAUU minimal chr2 + 238007462 238007485 repeat Low_complexity-AT_rich RepeatMasker G8927.1 ATAATTATATAATTTATTTATTT 3 3 3 39 1 0.477121255 0 0 0 3 0 0 3 chr2:238007462-238007485 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 + 238688863 238688884 3'utr LRRFIP1 Ensembl G8928.1 CATTATTTAATCCTTATATTT 3 2 3 33 1 0.477121255 0.666666667 0.5 0.666666667 1 0 0 3 chr2:238688863-238688884 minimal NA NA AUUUA UAUU minimal chr1 + 230829396 230829419 3'utr COG2 Ensembl G893.1 AACAAATTATTTTATTTTTATTG 7 2 5 86 0.714285714 0.698970004 1 0.666666667 0.857142857 1 2 0 5 chr1:230829396-230829419 minimal NA NA NA UAUU minimal chr1 + 231136245 231136268 3'utr ARV1 Ensembl G894.1 TTTATATCTTTTTAATTTAAATG 4 3 4 50 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr1:231136245-231136268 minimal NA NA AUUUA NA minimal chr2 - 19491953 19491976 lincRNA AC092594.1 Ensembl G8961.1 TTTGGCTGCTGCCACTGCTGAGT 8 2 8 42 0.727272727 0.301029996 0.181818182 0.428571429 0.636363636 4 0 3 8 chr2:19491953-19491976 NA NA NA NA NA NA chr2 - 20450045 20450069 3'utr PUM2 Ensembl G8963.1 ATTTTTTAAAAATTTTTTATCTTT 3 2 3 41 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:20450045-20450069 minimal NA NA NA NA NA chr2 - 20453727 20453749 coding PUM2 Ensembl G8969.1 ATGCCTCCCGTGCTGAGAGAGC 4 2 2 14 0.5 0.301029996 0 0 0 4 2 0 2 chr2:20453727-20453749 NA NA NA NA NA NA chr1 + 231489417 231489438 3'utr C1orf124 Ensembl G899.1 TATACTTTCCTAAAAATATTC 4 3 3 33 0.75 0.477121255 0.25 0 0 4 1 0 3 chr1:231489417-231489438 NA NA NA NA UAUU minimal chr2 - 20884861 20884887 3'utr C2orf43 Ensembl G8996.1 ATACTCATTCTTAATTCCTATTTATC 8 4 5 98 0.625 0.698970004 0 0.166666667 0.375 5 3 0 5 chr2:20884861-20884887 minimal NA NA AUUUA UAUU minimal chr2 - 24290561 24290591 NoAnnotation G9002.1 ACAACTACCACCTTTTTTTCCTTTTTAATT 8 6 7 87 0.875 0.84509804 0 0.142857143 0.25 6 1 0 7 chr2:24290561-24290591 NA NA NA NA NA NA chr2 - 25959319 25959341 NoAnnotation G9009.1 CATCTTCATAATTTCCATATAT 4 2 4 34 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:25959319-25959341 NA NA NA NA NA NA chr2 - 25960585 25960615 3'utr ASXL2 Ensembl G9010.1 TATTCCTATATTCTTATTTTTCATTTTATT 6 5 6 93 1 0.77815125 0 0 0 6 0 0 6 chr2:25960585-25960615 minimal NA NA NA UAUU minimal chr1 + 231700710 231700740 3'utr TSNAX Ensembl G902.1 ACTTATTTAGTATTTCATTTAACTTTATTG 9 4 9 118 1 0.954242509 0.333333333 0.4 0.666666667 3 0 0 9 chr1:231700710-231700740 minimal NA NA AUUUA UAUU minimal chr2 - 32249060 32249088 3'utr DPY30 Ensembl G9022.1 ATTTAATCACCATAAACCATACCTATTT 4 2 3 32 0.6 0.176091259 0 0 0 5 1 1 3 chr2:32249060-32249088 minimal NA NA AUUUA UAUU minimal chr2 - 32249088 32249110 3'utr DPY30 Ensembl G9023.1 ATAACATATTTCCCTTATTTTG 11 7 11 104 1 1.041392685 0 0.375 0.545454545 5 0 0 11 chr2:32249088-32249110 minimal NA NA NA UAUU minimal chr1 + 231700816 231700838 3'utr TSNAX Ensembl G903.1 AATCATTTCTTATATCTTATTC 3 3 3 33 1 0.477121255 0 0 0 3 0 0 3 chr1:231700816-231700838 minimal NA NA NA UAUU minimal chr2 - 37443888 37443913 intron CEBPZ Ensembl G9033.1 TTATTTATTTATTACCTTCTAGCTC 2 2 2 25 1 0.301029996 0 0 0 2 0 0 2 chr2:37443888-37443913 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 38207082 38207102 NoAnnotation G9035.1 ATTTTAATAATAATTAACTG 5 2 3 42 0.6 0.477121255 0 0.666666667 0.8 1 2 0 3 chr2:38207082-38207102 NA NA NA NA NA NA chr2 - 38294942 38294969 3'utr CYP1B1 Ensembl G9036.1 ATACCTTCTTATTTAATCTTTTCTTAT 5 3 5 67 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:38294942-38294969 minimal NA NA AUUUA UAUU minimal chr2 - 38297274 38297314 3'utr CYP1B1 Ensembl G9037.1 AAAATAACTTAGACTCTAGTATTTATGGGTGGATTTATCC 5 2 5 42 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:38297274-38297314 minimal NA NA AUUUA UAUU minimal chr2 - 38522860 38522893 3'utr ATL2 Ensembl G9039.1 TTAACTCTTTTATTTCTTTTTACTTAATCTAAT 5 2 4 73 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr2:38522860-38522893 minimal NA NA NA UAUU minimal chr1 + 231700946 231700969 3'utr TSNAX Ensembl G904.1 CCATAACCTATTTTAATTTACTT 10 6 10 89 0.909090909 0.698970004 0 0.375 0.545454545 5 0 1 10 chr1:231700946-231700969 minimal NA NA AUUUA UAUU minimal chr2 - 38524196 38524222 intron ATL2 Ensembl G9041.1 ATATTTATTCTATTTAAATTTTTATC 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr2:38524196-38524222 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 38910265 38910285 NoAnnotation G9043.1 TCTCTTTTTATTTCTAATCT 3 2 2 32 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:38910265-38910285 minimal NA NA NA UAUU minimal chr2 - 38970823 38970848 3'utr SRSF7 Ensembl G9044.1 TATAACTGGCAGGCTTATTTATCTG 6 4 6 49 1 0.77815125 0 0 0 6 0 0 6 chr2:38970823-38970848 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 38971137 38971157 3'utr SRSF7 Ensembl G9045.1 TTCTTTATTCAAATTTTAAG 3 3 3 30 1 0.477121255 0 0 0 3 0 0 3 chr2:38971137-38971157 minimal NA NA NA UAUU minimal chr2 - 42669239 42669260 3'utr KCNG3 Ensembl G9051.1 ATTTATTTTTTCTTAACTATT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:42669239-42669260 minimal NA NA AUUUA UAUU minimal chr2 - 43450343 43450371 3'utr ZFP36L2 Ensembl G9052.1 TAATATTTATTTCATTAATTTCTTTCCT 20 10 17 273 0.772727273 0.753327667 0 0.222222222 0.363636364 14 3 2 17 chr2:43450343-43450371 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 43450440 43450461 3'utr ZFP36L2 Ensembl G9053.1 TTCTTTTCACAGTAATATATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr2:43450440-43450461 NA NA NA NA NA NA chr2 - 43450476 43450497 3'utr ZFP36L2 Ensembl G9054.1 ATTGCCATTATTAATCGGCAA 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:43450476-43450497 minimal NA NA NA UAUU minimal chr2 - 43450507 43450527 3'utr ZFP36L2 Ensembl G9055.1 ATATATATTCTTTTATTATG 12 3 11 133 0.916666667 1.041392685 0 0.5 0.833333333 2 1 0 11 chr2:43450507-43450527 minimal NA NA NA UAUU minimal chr2 - 43450590 43450618 3'utr ZFP36L2 Ensembl G9056.1 AAAACTATTTAACTTATTTATTATCTTG 88 12 78 920 0.857142857 1.290034611 0 0.390243902 0.725274725 25 10 3 78 chr2:43450590-43450618 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 233519403 233519431 3'utr RP5-862P8.2 Ensembl G906.1 CATGTGTCTTAATTTTATTTTCTCTATT 3 3 3 40 1 0.477121255 0 0 0 3 0 0 3 chr1:233519403-233519431 minimal NA NA NA UAUU minimal chr2 - 43819532 43819553 5'utr THADA Ensembl G9061.1 ACTACTATTAATTCTATTTAA 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr2:43819532-43819553 minimal NA NA AUUUA UAUU minimal chr2 - 45616151 45616174 3'utr SRBD1 Ensembl G9068.1 TAATTTATCTTTAACTCCTTTTG 3 2 3 32 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:45616151-45616174 minimal NA NA AUUUA NA minimal chr1 + 233519437 233519457 3'utr RP5-862P8.2 Ensembl G907.1 CATAATTATCCTAATAATCC 6 4 5 31 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr1:233519437-233519457 minimal NA NA NA NA NA chr2 - 47387725 47387746 3'utr CALM2 Ensembl G9075.1 TCCTAAAACCTTATTTTAGAA 8 2 8 56 1 0.903089987 0 1 1 0 0 0 8 chr2:47387725-47387746 minimal NA NA NA UAUU minimal chr2 - 47387746 47387771 3'utr CALM2 Ensembl G9076.1 TTCTTCCCTTATCTTACTGTCATTG 5 2 2 51 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr2:47387746-47387771 minimal NA NA NA NA NA chr2 - 53874905 53874930 NoAnnotation G9084.1 CATATACTTCATCTTTTTTCCTATT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:53874905-53874930 NA NA NA NA UAUU minimal chr2 - 53897153 53897186 NoAnnotation G9085.1 TTATTATTATCATTATTATTTTATTTAGACTTG 5 2 4 92 0.8 0.602059991 0 0.666666667 0.8 1 1 0 4 chr2:53897153-53897186 minimal NA NA AUUUA UAUU minimal chr1 + 233519643 233519666 3'utr RP5-862P8.2 Ensembl G909.1 ATTTAAATAATAAAATTATCTAT 5 3 5 44 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:233519643-233519666 minimal NA NA AUUUA NA minimal chr2 - 55525026 55525049 intron CCDC88A Ensembl G9093.1 CTTCATATCTTTATTTAACTTTC 6 2 4 67 0.666666667 0.602059991 0 0.666666667 0.833333333 1 2 0 4 chr2:55525026-55525049 minimal NA NA AUUUA UAUU minimal chr2 - 55841673 55841697 intron SMEK2 Ensembl G9097.1 TATCCATAAATAATATGTAGTCTG 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:55841673-55841697 NA NA NA NA NA NA chr2 - 55842330 55842352 intron SMEK2 Ensembl G9098.1 TATTATTTAACTGTAGTTAGCC 10 2 9 88 1 1 0 0.5 0.8 2 0 0 10 chr2:55842330-55842352 minimal NA NA AUUUA UAUU minimal chr2 - 55901735 55901764 intron PNPT1 Ensembl G9099.1 ATTTACTCTTTTTCTCTATTTATTTATTT 3 2 3 51 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:55901735-55901764 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 + 233520512 233520556 3'utr RP5-862P8.2 Ensembl G910.1 TTATTATTCCCCTTTAGCTTTATTTTAGTCAACTCTACATTATG 15 4 15 165 1 1.176091259 0.2 0.2 0.466666667 8 0 0 15 chr1:233520512-233520556 minimal NA NA NA UAUU minimal chr2 - 58411731 58411758 intron FANCL Ensembl G9106.1 CTTTAATTTTTCTCTTATATTTTTATT 2 2 2 36 1 0.301029996 0 0 0 2 0 0 2 chr2:58411731-58411758 minimal NA NA NA UAUU minimal chr2 - 60768948 60768979 intron BCL11A Ensembl G9113.1 ACTACTTATTTTTCTTTTCTCTTTATTTATG 2 2 2 37 1 0.301029996 0 0 0 2 0 0 2 chr2:60768948-60768979 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 60780539 60780560 5'utr BCL11A Ensembl G9114.1 TATTATTTCTAATTTATTTTG 5 2 4 66 0.8 0.602059991 0 0.333333333 0.6 2 1 0 4 chr2:60780539-60780560 minimal NA NA AUUUA UAUU minimal chr2 - 61705132 61705152 3'utr XPO1 Ensembl G9122.1 ACTTATACTAATTTACATTG 6 3 6 48 1 0.77815125 0 0.333333333 0.666666667 2 0 0 6 chr2:61705132-61705152 minimal NA NA AUUUA NA minimal chr2 - 61719435 61719458 intron XPO1 Ensembl G9124.1 TAAATCTCTTTCTTTACTATATT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:61719435-61719458 NA NA NA NA UAUU minimal chr1 + 235507582 235507602 3'utr GGPS1 Ensembl G913.1 ATCTATTTACCATATATTTG 3 3 3 27 1 0.477121255 1 0 0 3 0 0 3 chr1:235507582-235507602 minimal NA NA AUUUA UAUU minimal chr2 - 64320368 64320397 3'utr PELI1 Ensembl G9138.1 CATACCTTTAATTTATCCTATTACAAAAC 6 5 5 59 0.714285714 0.397940009 0 0 0 7 1 1 5 chr2:64320368-64320397 minimal NA NA AUUUA UAUU minimal chr2 - 64321040 64321065 3'utr PELI1 Ensembl G9139.1 CAATTTAATCTAGATTATCTATTTT 4 2 4 43 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:64321040-64321065 minimal NA NA AUUUA UAUU minimal chr1 + 235516732 235516758 NoAnnotation G914.1 ATACCTATTTATTACTTTTCATTTTT 2 2 2 30 1 0.301029996 0.5 0 0 2 0 0 2 chr1:235516732-235516758 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 64321412 64321442 3'utr PELI1 Ensembl G9140.1 TATATTAACTTTTTTCTATTTATCTTTATT 51 9 46 727 0.901960784 1.662757832 0 0.303030303 0.549019608 23 5 0 46 chr2:64321412-64321442 minimal NA NA AUUUA UAUU minimal chr2 - 64862647 64862676 3'utr SERTAD2 Ensembl G9142.1 AAAACTATATATATATATCTTATTTAGAT 4 4 4 42 1 0.602059991 0 0 0 4 0 0 4 chr2:64862647-64862676 minimal NA NA AUUUA UAUU minimal chr2 - 65538170 65538190 3'utr SPRED2 Ensembl G9144.1 CATAATTCATTCTTTACCTG 4 2 4 32 1 0.602059991 0 0.5 0.75 1 0 0 4 chr2:65538170-65538190 NA NA NA NA NA NA chr2 - 68407459 68407479 3'utr PPP3R1 Ensembl G9151.1 TAACTTTATTTATACTTATG 12 4 9 123 0.75 0.954242509 0 0.4 0.75 3 3 0 9 chr2:68407459-68407479 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 68407495 68407529 3'utr PPP3R1 Ensembl G9152.1 TTAACGTCCTATTATTTACCTTAATTACATTTTT 9 5 7 92 0.777777778 0.84509804 0 0.125 0.222222222 7 2 0 7 chr2:68407495-68407529 minimal NA NA AUUUA UAUU minimal chr2 - 68407802 68407831 3'utr PPP3R1 Ensembl G9153.1 CTTTTTAATTTATTTTTCTTCATCTTTTA 13 7 12 206 0.857142857 0.77815125 0 0.166666667 0.285714286 10 1 1 12 chr2:68407802-68407831 minimal NA NA AUUUA UAUU minimal chr2 - 69551571 69551593 3'utr GFPT1 Ensembl G9157.1 CTATATTAATCTACTTTAATTG 4 2 4 40 0.8 0.301029996 0 0.25 0.4 3 0 1 4 chr2:69551571-69551593 NA NA NA NA UAUU minimal chr2 - 69551606 69551631 3'utr GFPT1 Ensembl G9158.1 TCACTATTTACATTATATATAATAT 4 2 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:69551606-69551631 minimal NA NA AUUUA UAUU minimal chr1 + 236851754 236851774 intron ACTN2 Ensembl G916.1 CCATATTTAATCTTTTAACT 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr1:236851754-236851774 minimal NA NA AUUUA UAUU minimal chr2 - 73956518 73956548 NoAnnotation G9170.1 TTTCTATTCAAATATATTTTATTTTTATAT 4 4 4 57 1 0.602059991 0 0 0 4 0 0 4 chr2:73956518-73956548 minimal NA NA NA UAUU minimal chr2 - 74362620 74362644 3'utr BOLA3 Ensembl G9173.1 TCACCAAAAAATTTATATATTTTG 5 3 4 38 0.8 0.602059991 0 0 0 5 1 0 4 chr2:74362620-74362644 minimal NA NA AUUUA UAUU minimal chr2 - 74382832 74382859 3'utr MOBKL1B Ensembl G9174.1 ATCTCAAAACCACTATTTTTATTATTT 4 2 2 35 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr2:74382832-74382859 minimal NA NA NA UAUU minimal chr2 - 74382987 74383013 3'utr MOBKL1B Ensembl G9176.1 TTTTCATATCTATCTAAATTATTAGG 8 5 6 90 0.75 0.77815125 0 0.142857143 0.25 6 2 0 6 chr2:74382987-74383013 minimal NA NA NA UAUU minimal chr2 - 74383397 74383418 3'utr MOBKL1B Ensembl G9178.1 CTTATAAATTTACTTATTATT 7 5 6 75 0.6 0.176091259 0 0.25 0.4 6 1 3 6 chr2:74383397-74383418 minimal NA NA AUUUA UAUU minimal chr2 - 75921343 75921365 intron C2orf3 Ensembl G9184.1 TACATATCAATATTTATTTATA 4 2 4 40 1 0.602059991 0 1 1 0 0 0 4 chr2:75921343-75921365 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 77802346 77802372 NoAnnotation G9188.1 TTCATCATTTAACTCTTCTATTTATG 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:77802346-77802372 minimal NA NA AUUUA UAUU minimal chr2 - 78043063 78043083 NoAnnotation G9189.1 TTTAATTCTCTATTATTATT 3 2 3 36 1 0.477121255 0 0 0 3 0 0 3 chr2:78043063-78043083 minimal NA NA NA UAUU minimal chr2 - 85545280 85545314 3'utr TGOLN2 Ensembl G9197.1 TAACTTAACTATAATTACTTAATTTTATTTTTTT 46 12 43 550 0.914893617 1.33243846 0 0.28125 0.510638298 23 3 1 43 chr2:85545280-85545314 minimal NA NA NA UAUU minimal chr2 - 86531210 86531232 intron REEP1 Ensembl G9200.1 TGGGTTGTAAACTGCTTTTGTA 11 2 11 98 0.916666667 0.740362689 0.083333333 0.25 0.75 3 0 1 11 chr2:86531210-86531232 NA NA NA NA NA NA chr2 - 100017492 100017521 3'utr REV1 Ensembl G9209.1 TTAATTATTTTACTGTAGCATAGATTCTA 13 6 13 141 1 1.113943352 0 0.333333333 0.538461538 6 0 0 13 chr2:100017492-100017521 minimal NA NA NA UAUU minimal chr2 - 103333123 103333144 3'utr MFSD9 Ensembl G9218.1 TCATATCTTTAATATTTATTG 12 4 7 137 0.583333333 0.84509804 0 0.5 0.75 3 5 0 7 chr2:103333123-103333144 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 111408569 111408599 intron BUB1 Ensembl G9228.1 TATTACCTCACCTATTTATCTAATATAACC 3 2 3 29 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:111408569-111408599 minimal NA NA AUUUA UAUU minimal chr2 - 112404554 112404575 NoAnnotation G9230.1 TTCTATTTAATTTCTTTTAAT 3 2 3 39 1 0.477121255 0 0 0 3 0 0 3 chr2:112404554-112404575 minimal NA NA AUUUA UAUU minimal chr2 - 113007559 113007589 intron ZC3H8 Ensembl G9232.1 TTATACTTTTTAAATAAATTATTATTTAAT 3 2 3 41 1 0.477121255 0 0 0 3 0 0 3 chr2:113007559-113007589 minimal NA NA AUUUA UAUU minimal chr2 - 113495496 113495520 3'utr CKAP2L Ensembl G9234.1 TCAACACATTTTAAATTTTAGCTT 8 2 8 68 1 0.903089987 0 0.6 0.75 2 0 0 8 chr2:113495496-113495520 NA NA NA NA NA NA chr2 - 113496121 113496142 3'utr CKAP2L Ensembl G9235.1 ATAAATATTTATACTTTATTG 3 2 3 30 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:113496121-113496142 minimal NA NA AUUUA UAUU minimal chr1 + 237766558 237766589 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G925.1 ACCCTGTTGAGCTTGACTCTAGTCTGGCACG 62 2 2 441 0.029411765 -1.135662602 0.794117647 0.318181818 0.705882353 30 59 40 3 chr1:237766558-237766589 NA NA NA NA NA NA chr2 - 128057970 128057991 3'utr MAP3K2 Ensembl G9257.1 CCATTAAATTCTCTATATTTA 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr2:128057970-128057991 minimal NA NA AUUUA UAUU minimal chr2 - 128605349 128605378 3'utr POLR2D Ensembl G9265.1 CCTCCACATCATCTTTTTTCTTAATATTT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:128605349-128605378 NA NA NA NA UAUU minimal chr2 - 128619531 128619551 3'utr AMMECR1L Ensembl G9267.1 ACATTACATATATTTTATTG 8 4 6 71 0.75 0.77815125 0 0.4 0.625 3 2 0 6 chr2:128619531-128619551 minimal NA NA NA UAUU minimal chr2 - 128621165 128621187 3'utr AMMECR1L Ensembl G9268.1 TTTTTATTTAATTTATTTTTTG 3 2 3 48 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:128621165-128621187 minimal NA NA AUUUA UAUU minimal chr2 - 131805558 131805579 3'utr FAM168B Ensembl G9270.1 ATACTATTTTAATTTTTTATG 5 3 5 60 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr2:131805558-131805579 minimal NA NA NA UAUU minimal chr2 - 131809147 131809174 3'utr FAM168B Ensembl G9272.1 TAAAACTAAATTATTTTCCTGGGATGG 4 2 3 34 0.75 0.477121255 0 0.333333333 0.5 2 1 0 3 chr2:131809147-131809174 minimal NA NA NA UAUU minimal chr2 - 133012042 133012068 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9276.1 ATTGGATGGTTTAGTGAGGCCCTCGG 52 3 3 333 0.046153846 -0.669006781 0.061538462 0.185185185 0.661538462 22 49 13 3 chr2:133012042-133012068 NA NA NA NA NA NA chr2 - 133012125 133012152 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9278.1 ATGAATGAGGAATTCCCAGTAAGTGCT 237 2 237 751 1 2.374748346 0 0.428571429 0.983122363 4 0 0 237 chr2:133012125-133012152 NA NA NA NA NA NA chr1 + 242029016 242029047 repeat Low_complexity-AT_rich RepeatMasker G928.1 TTATTTTTATTTATCTAAAATTTATTTAGTC 3 2 3 35 1 0.477121255 0 0 0 3 0 0 3 chr1:242029016-242029047 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 133012712 133012770 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9284.1 TGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTTGTA 295 7 12 1580 0.032085561 -0.823908741 0.050802139 0.29375 0.697860963 113 283 79 12 chr2:133012712-133012770 NA NA NA NA NA NA chr2 - 133012841 133012900 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9285.1 GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCAT 605 8 22 4831 0.022494888 -1.230448921 0.156441718 0.3625 0.843558282 153 583 373 22 chr2:133012841-133012900 NA NA NA NA UAUU minimal chr2 - 133013075 133013107 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9287.1 TGCAGTTAAAAAGCTCGTAGTTGAATCTTGGG 232 6 13 1195 0.11550152 -0.411442479 0.167173252 0.382857143 0.671732523 108 194 97 38 chr2:133013075-133013107 NA NA NA NA NA NA chr2 - 133013129 133013187 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9287.2 TTAATGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGTGGTAATTCCAGCTC 621 4 496 2353 0.721979622 0.869406874 0.181950509 0.469879518 0.871906841 88 125 66 496 chr2:133013129-133013187 NA NA NA NA NA NA chr2 - 133013289 133013341 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9289.1 TTCTGGAGAAGGAGCCTGAGAAATGGCTACCACATTCAAGGAAGGCAGCAGA 5 3 5 12 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:133013289-133013341 NA NA NA NA NA NA chr2 - 133036517 133036553 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9295.1 TGAACGCCTCTAAGTCAGAATCCTGCCCAGGCGGAA 540 2 512 2164 0.896672504 1.204119983 0.014010508 0.351851852 0.938704028 35 28 31 512 chr2:133036517-133036553 NA NA NA NA NA NA chr1 + 242048952 242048974 intron EXO1 Ensembl G930.1 CTAACTCTTTATACTTAATATC 3 2 3 27 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:242048952-242048974 minimal NA NA NA NA NA chr2 - 133038446 133038470 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9307.1 AGGCGTCCAGTGCGGTAATGTGAC 13 2 13 41 1 1.113943352 0 1 1 0 0 0 13 chr2:133038446-133038470 NA NA NA NA NA NA chr1 + 242088829 242088850 NoAnnotation G931.1 AAATCTTTACAAATATTTATC 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr1:242088829-242088850 minimal NA NA AUUUA UAUU minimal chr2 - 133038976 133039013 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9312.1 GGTGGCCATGGAAGTTGGAATCCGCTAAGGAGTGTAA 173 2 168 755 0.943820225 1.447158031 0.308988764 0.462686567 0.797752809 36 5 5 168 chr2:133038976-133039013 NA NA NA NA NA NA chr2 - 133039077 133039115 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9314.1 CAGAACTGGCACTGTGGGATGAACCAAATGCCGGGTTA 13 2 13 41 0.590909091 0.113943352 0.090909091 0.307692308 0.590909091 9 0 9 13 chr2:133039077-133039115 NA NA NA NA NA NA chr2 - 136199074 136199099 intron ZRANB3 Ensembl G9318.1 TCATTTATATTTATATTAATATATA 3 3 3 36 1 0.477121255 0 0 0 3 0 0 3 chr2:136199074-136199099 minimal NA NA AUUUA UAUU minimal chr2 - 136872263 136872287 3'utr CXCR4 Ensembl G9324.1 ACTTATTTATATAAATTTTTTTTG 6 2 3 86 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr2:136872263-136872287 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 142590739 142590765 intron LRP1B Ensembl G9335.1 CTATTTATTAAATTATTTTAAAATTT 2 2 2 27 1 0.301029996 0 0 0 2 0 0 2 chr2:142590739-142590765 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 142818365 142818390 intron LRP1B Ensembl G9336.1 CTCTATTAACCTATTATCTTATTTT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:142818365-142818390 minimal NA NA NA UAUU minimal chr2 - 145145324 145145349 3'utr ZEB2 Ensembl G9340.1 TTATATTATTCAAATTTAGTCTATT 3 2 3 35 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:145145324-145145349 minimal NA NA AUUUA UAUU minimal chr2 - 145146004 145146034 3'utr ZEB2 Ensembl G9341.1 CTCATTTTATATTTCCTAATTTTATTTATT 15 8 15 213 1 1.176091259 0 0.071428571 0.133333333 13 0 0 15 chr2:145146004-145146034 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 145146580 145146602 3'utr ZEB2 Ensembl G9344.1 TATTCCTTTTTAATTTAATGTG 3 2 3 34 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:145146580-145146602 minimal NA NA AUUUA UAUU minimal chr2 - 148691765 148691790 3'utr ORC4 Ensembl G9347.1 CTTACAATCTATTTAACTATTAGAG 9 4 9 81 1 0.954242509 0 0.4 0.666666667 3 0 0 9 chr2:148691765-148691790 minimal NA NA AUUUA UAUU minimal chr2 - 148692966 148692997 3'utr ORC4 Ensembl G9348.1 CTAAACATTCTATAAACATTCTTGTATTTAT 5 4 5 43 1 0.698970004 0 0 0 5 0 0 5 chr2:148692966-148692997 minimal NA NA AUUUA UAUU minimal chr1 + 244219531 244219556 3'utr ZNF238 Ensembl G935.1 TTTAAAATTATTTAATTTCCTTAGA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr1:244219531-244219556 minimal NA NA AUUUA UAUU minimal chr2 - 151324740 151324769 3'utr RND3 Ensembl G9351.1 TATTTATTAAAACATACTTTTTTTTTCTT 13 8 8 181 0.533333333 0.425968732 0 0.071428571 0.133333333 13 5 2 8 chr2:151324740-151324769 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 154333874 154333900 3'utr RPRM Ensembl G9359.1 TTTTTTTCTTATTTAACATTTCCTTA 5 4 5 76 1 0.698970004 0.2 0.25 0.4 3 0 0 5 chr2:154333874-154333900 minimal NA NA AUUUA UAUU minimal chr1 + 244219611 244219636 repeat Low_complexity-AT_rich RepeatMasker G936.1 TTTTTATTTTTATTTTATATAATTT 7 3 5 121 0.714285714 0.698970004 0 0.4 0.571428571 3 2 0 5 chr1:244219611-244219636 minimal NA NA NA UAUU minimal chr2 - 157050573 157050602 repeat LINE-L2c RepeatMasker G9363.1 CTACACTCTATCCATATCATAATATTTAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:157050573-157050602 minimal NA NA AUUUA UAUU minimal chr2 - 157181096 157181117 3'utr NR4A2 Ensembl G9364.1 CATATTCTGTAGTATTTTTCT 3 2 2 33 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:157181096-157181117 NA NA NA NA UAUU minimal chr2 - 159440484 159440510 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9366.1 TTGGGAACCTGGCGCTAAACCATTTG 9 2 7 42 0.636363636 0.367976785 0.181818182 0.142857143 0.454545455 6 2 2 7 chr2:159440484-159440510 NA NA NA NA NA NA chr1 + 244220490 244220516 repeat Low_complexity-AT_rich RepeatMasker G937.1 TTAAAATAATTTTTATTAATTTAGAG 3 3 3 34 1 0.477121255 0.666666667 0 0 3 0 0 3 chr1:244220490-244220516 minimal NA NA AUUUA UAUU minimal chr2 - 170429169 170429195 intron FASTKD1 Ensembl G9386.1 ACTTCTTTTATTTATTTATTTTCTAA 3 2 2 49 0.666666667 0.301029996 0 0 0 3 1 0 2 chr2:170429169-170429195 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 170429267 170429293 intron FASTKD1 Ensembl G9387.1 AAACATTACTTAATTTCTTAGTATTT 3 2 3 31 1 0.477121255 0 0 0 3 0 0 3 chr2:170429267-170429293 NA NA NA NA UAUU minimal chr1 + 244870446 244870471 3'utr PPPDE1 Ensembl G939.1 CTTTATATACATATAAAATATAGTT 3 2 3 30 1 0.477121255 0 0 0 3 0 0 3 chr1:244870446-244870471 minimal NA NA NA NA NA chr2 - 172178365 172178392 NoAnnotation G9394.1 TCTCATACTCATTACATAATATTTATT 5 3 3 56 0.6 0.477121255 0 0 0 5 2 0 3 chr2:172178365-172178392 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 172964176 172964196 3'utr DLX2 Ensembl G9398.1 ATTATTTAAATAAATTATTG 9 4 9 81 1 0.954242509 0 0.75 0.888888889 1 0 0 9 chr2:172964176-172964196 minimal NA NA AUUUA UAUU minimal chr2 - 172964419 172964441 3'utr DLX2 Ensembl G9400.1 TATAAAAATACTCATCTTTTCA 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr2:172964419-172964441 NA NA NA NA NA NA chr1 + 244871270 244871294 3'utr PPPDE1 Ensembl G941.1 ATTCCTTATAATCTAATTATACCT 6 3 6 58 1 0.77815125 0.333333333 1 1 0 0 0 6 chr1:244871270-244871294 minimal NA NA NA NA NA chr2 - 175938263 175938295 3'utr ATF2 Ensembl G9418.1 AAAAAAAATCAGTATCTATCTTTAGAACAATG 3 2 3 21 1 0.477121255 0 0 0 3 0 0 3 chr2:175938263-175938295 NA NA NA NA NA NA chr2 - 175938532 175938552 3'utr ATF2 Ensembl G9419.1 TATCAAATATCTAATAATTT 4 2 4 31 0.8 0.301029996 0 0.333333333 0.6 2 0 1 4 chr2:175938532-175938552 NA NA NA NA NA NA chr2 - 175938686 175938715 3'utr ATF2 Ensembl G9420.1 TCATTTATAATCATTTTCCTTTTTTATTT 21 6 20 301 0.952380952 1.301029996 0 0.428571429 0.619047619 8 1 0 20 chr2:175938686-175938715 minimal NA NA AUUUA UAUU minimal chr2 - 175939110 175939132 3'utr ATF2 Ensembl G9421.1 CTTTTTTTATAAATATTATTAG 8 4 8 96 1 0.903089987 0 0.75 0.875 1 0 0 8 chr2:175939110-175939132 minimal NA NA NA UAUU minimal chr2 - 178095245 178095270 3'utr NFE2L2 Ensembl G9427.1 TAAATACTACAAAAACTTATTTATA 7 2 2 56 0.285714286 0.301029996 0 0.4 0.571428571 3 5 0 2 chr2:178095245-178095270 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 179974016 179974047 3'utr SESTD1 Ensembl G9431.1 ACTTCTTTAAACATCTTATTTAATTTAGTAG 4 3 4 48 1 0.602059991 0 0 0 4 0 0 4 chr2:179974016-179974047 minimal NA NA AUUUA UAUU minimal chr2 - 180809668 180809689 3'utr CWC22 Ensembl G9432.1 CCCTACCCATAAAATTATTTG 3 2 3 18 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:180809668-180809689 minimal NA NA NA UAUU minimal chr2 - 183840640 183840671 intron NCKAP1 Ensembl G9438.1 TCTTTTTAAAAAAATATTTACTTATTTATTT 4 2 2 65 0.5 0.301029996 0 0 0 4 2 0 2 chr2:183840640-183840671 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 191402711 191402750 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9455.1 TGTTGATGTGTTGTTGCCATGGTAATCCTGCTCAGTATA 14 2 7 139 0.24137931 -0.359021943 0.24137931 0.173913043 0.344827586 19 7 15 7 chr2:191402711-191402750 NA NA NA NA NA NA chr2 - 192550199 192550219 NoAnnotation G9457.1 ACACTTTTATTTTTATACAG 5 2 2 48 0.4 0.301029996 0 0.25 0.4 3 3 0 2 chr2:192550199-192550219 minimal NA NA NA UAUU minimal chr2 - 197001326 197001355 repeat LTR-LTR90A RepeatMasker G9462.1 TATTTTTAGTCAAACATATTTATTAATTG 33 5 31 373 0.939393939 1.491361694 0 0.266666667 0.666666667 11 2 0 31 chr2:197001326-197001355 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 197013371 197013399 intron STK17B Ensembl G9463.1 AATACACATCTATTTTTTATATATTTAG 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr2:197013371-197013399 minimal NA NA AUUUA UAUU minimal chr2 - 198256772 198256797 3'utr SF3B1 Ensembl G9467.1 ATTTCATTTTTAATTCATCTTTATG 7 3 4 79 0.571428571 0.602059991 0 0.4 0.571428571 3 3 0 4 chr2:198256772-198256797 minimal NA NA NA NA NA chr2 - 198257018 198257040 coding SF3B1 Ensembl G9468.1 ACTATATCTTATAATTTTATTG 113 10 103 1241 0.903508772 1.711807229 0 0.615384615 0.912280702 10 10 1 103 chr2:198257018-198257040 minimal NA NA NA UAUU minimal chr2 - 200134282 200134303 3'utr SATB2 Ensembl G9472.1 ATAATTAATTTTTAACTTATG 5 4 5 50 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:200134282-200134303 minimal NA NA NA NA NA chr2 - 200135118 200135150 3'utr SATB2 Ensembl G9473.1 TAATATAACTGTTAATACTATTTATATATTTG 8 3 8 88 1 0.903089987 0 0.6 0.75 2 0 0 8 chr2:200135118-200135150 minimal NA NA AUUUA UAUU minimal chr2 - 200258867 200258891 intron SATB2 Ensembl G9475.1 ATATAAACTATTCTATTGGGTACT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr2:200258867-200258891 NA NA NA NA UAUU minimal chr2 - 201717919 201717940 3'utr CLK1 Ensembl G9477.1 AATTCTTAACATTTTTATATT 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr2:201717919-201717940 minimal NA NA NA UAUU minimal chr2 - 201843930 201843956 3'utr FAM126B Ensembl G9480.1 TATTTTAAATATTTTAAATACCCTTT 4 3 4 49 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:201843930-201843956 NA NA NA NA UAUU minimal chr2 - 201880866 201880891 intron FAM126B Ensembl G9481.1 TATTATTAATATTTTATTTATATCT 4 2 4 56 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:201880866-201880891 UUAUUUAU NA NA AUUUA UAUU minimal chr2 - 201887767 201887791 intron FAM126B Ensembl G9482.1 CCTATTTCTTTATATTAATTATTT 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:201887767-201887791 minimal NA NA NA UAUU minimal chr2 - 202624415 202624436 3'utr ALS2 Ensembl G9484.1 TCTTTATTTCACAATCTATTC 4 2 4 40 1 0.602059991 0 0.5 0.75 1 0 0 4 chr2:202624415-202624436 minimal NA NA NA UAUU minimal chr2 - 202624742 202624765 3'utr ALS2 Ensembl G9485.1 CCTATTTTATATATCTTATTAAA 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr2:202624742-202624765 minimal NA NA NA UAUU minimal chr2 - 202662405 202662425 NoAnnotation G9486.1 ATATTTAATTTTCCACTCTC 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:202662405-202662425 minimal NA NA AUUUA UAUU minimal chr2 - 204303905 204303930 3'utr RAPH1 Ensembl G9493.1 TTATTCTATTTATTCCTTTTCTCTC 3 3 3 44 1 0.477121255 0 0 0 3 0 0 3 chr2:204303905-204303930 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 206860073 206860098 3'utr INO80D Ensembl G9495.1 ACATCCACACACTATTTATTTATCT 5 2 2 46 0.285714286 -0.176091259 0 0 0 7 3 2 2 chr2:206860073-206860098 UUAUUUAU NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 206867066 206867086 3'utr INO80D Ensembl G9498.1 ATCACCATAAATTTCTATTC 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr2:206867066-206867086 NA NA NA NA UAUU minimal chr2 - 206867104 206867135 3'utr INO80D Ensembl G9499.1 CAAAATTTCTAAATTATAACTTATGTCATAA 10 6 9 89 0.818181818 0.653212514 0 0.1 0.181818182 9 1 1 9 chr2:206867104-206867135 minimal NA NA NA NA NA chr1 + 32637654 32637682 3'utr KPNA6 Ensembl G95.1 TATTTTTTTATATTCTATATATTAGGTA 15 6 14 222 0.933333333 1.146128036 0.066666667 0.3 0.533333333 7 1 0 14 chr1:32637654-32637682 minimal NA NA NA UAUU minimal chr2 - 208629661 208629691 3'utr FZD5 Ensembl G9505.1 CCTATTTTATTCCTCTATTTATTCTTCTAG 3 3 3 42 1 0.477121255 0 0 0 3 0 0 3 chr2:208629661-208629691 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 208686177 208686198 lincRNA AC096772.6 Ensembl G9506.1 CATAACTTATCTATATTTTTG 4 2 3 41 0.75 0.477121255 0 0 0 4 1 0 3 chr2:208686177-208686198 minimal NA NA NA UAUU minimal chr2 - 213301019 213301040 intron ERBB4 Ensembl G9513.1 TCATATTTATTTCTTTTAATA 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:213301019-213301040 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 217536896 217536922 3'utr IGFBP5 Ensembl G9520.1 TATACTATTTATTCAACTTATAATTT 5 3 5 62 1 0.698970004 0 0.25 0.4 3 0 0 5 chr2:217536896-217536922 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr2 - 220420568 220420594 3'utr OBSL1 Ensembl G9529.1 CAAAACTTTTCTTTTTCTAATATTTT 3 2 3 38 1 0.477121255 0 0 0 3 0 0 3 chr2:220420568-220420594 NA NA NA NA UAUU minimal chr2 - 223510176 223510198 intron FARSB Ensembl G9530.1 TACATTATCTTACCTTATTTTT 4 3 4 44 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr2:223510176-223510198 minimal NA NA NA UAUU minimal chr2 - 225337708 225337735 3'utr CUL3 Ensembl G9533.1 TATTTTTATCTTCAATTTTATTTAATT 5 3 5 78 0.833333333 0.397940009 0 0.5 0.666666667 2 0 1 5 chr2:225337708-225337735 minimal NA NA AUUUA UAUU minimal chr2 - 225370701 225370722 coding CUL3 Ensembl G9534.1 AATACCTCTCATTATTTATTG 11 3 8 102 0.727272727 0.903089987 0 0.666666667 0.818181818 2 3 0 8 chr2:225370701-225370722 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 1271107 1271128 3'utr DVL1 Ensembl G954.1 ATCTAATTTATTTATTTATTG 7 3 3 88 0.428571429 0.477121255 0 0.25 0.571428571 3 4 0 3 chr1:1271107-1271128 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 230045486 230045518 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9543.1 ATCCCCGAATCCGGAGTGGCGGAGATGGGCGT 496 3 109 1494 0.192982456 0.166331422 0.012280702 0.367088608 0.912280702 50 386 74 110 chr2:230045486-230045518 NA NA NA NA NA NA chr2 - 230045575 230045605 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9544.1 GGTCCTGAGAGATGGGCGAGCGCCGTTCCG 222 3 3 692 0.010948905 -1.247154615 0.076642336 0.336842105 0.770072993 63 219 52 3 chr2:230045575-230045605 NA NA NA NA NA NA chr2 - 234746430 234746458 intron HJURP Ensembl G9555.1 TTTCTTTAACATAACTTACTTATTTAAC 3 2 3 35 0.75 0.176091259 0 0.333333333 0.5 2 0 1 3 chr2:234746430-234746458 minimal NA NA AUUUA UAUU minimal chr2 - 240254486 240254509 intron HDAC4 Ensembl G9557.1 CTTATTTATTATATTAATATTTT 3 2 3 39 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr2:240254486-240254509 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr2 - 241058020 241058048 NoAnnotation G9561.1 ACTTTTATATCTTAACCACTTTAGTTAG 3 2 3 36 1 0.477121255 0 0 0 3 0 0 3 chr2:241058020-241058048 minimal NA NA NA NA NA chr2 - 242624770 242624792 intron DTYMK Ensembl G9565.1 CAATTTTAATTTACTTTATTTT 7 3 6 87 0.857142857 0.77815125 0 0.4 0.571428571 3 1 0 6 chr2:242624770-242624792 minimal NA NA AUUUA UAUU minimal chr20 + 279670 279693 3'utr ZCCHC3 Ensembl G9566.1 CCCCTCCCTTTTAAAATTTTATT 7 3 6 71 0.857142857 0.77815125 0 0.25 0.571428571 3 1 0 6 chr20:279670-279693 minimal NA NA NA UAUU minimal chr1 - 2301149 2301174 intron MORN1 Ensembl G958.1 ATTATAATTATTTTATTAATTATTT 3 2 2 46 0.666666667 0.301029996 0 0 0 3 1 0 2 chr1:2301149-2301174 minimal NA NA NA UAUU minimal chr20 + 4682125 4682147 3'utr PRNP Ensembl G9581.1 TACTTTATATTTTCTATATTTG 8 4 8 102 1 0.903089987 0.625 0.333333333 0.5 4 0 0 8 chr20:4682125-4682147 minimal NA NA NA UAUU minimal chr20 + 10025391 10025423 intron ANKRD5 Ensembl G9590.1 CTAATTTACTTATTTAATATTATTCATAGTAT 7 4 7 89 1 0.84509804 0 0.166666667 0.285714286 5 0 0 7 chr20:10025391-10025423 minimal NA NA AUUUA UAUU minimal chr20 + 11905065 11905086 3'utr BTBD3 Ensembl G9598.1 TTAAACTCCTACTAATTTAAA 4 3 4 28 1 0.602059991 0 0 0 4 0 0 4 chr20:11905065-11905086 minimal NA NA AUUUA NA minimal chr20 + 11905118 11905141 3'utr BTBD3 Ensembl G9599.1 ACTCATACTACAAATAATTTAAT 5 2 4 33 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr20:11905118-11905141 minimal NA NA AUUUA NA minimal chr1 + 32638041 32638078 3'utr KPNA6 Ensembl G96.1 ATCACCCATGGCTGCCTCTCCTATTATCTATTATCAC 10 3 10 85 1 1 0 0.5 0.7 3 0 0 10 chr1:32638041-32638078 minimal NA NA NA UAUU minimal chr20 + 11905243 11905265 3'utr BTBD3 Ensembl G9600.1 AATTTCTATTTTCTTTTTCCCC 3 2 3 36 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr20:11905243-11905265 NA NA NA NA UAUU minimal chr20 + 11905519 11905539 3'utr BTBD3 Ensembl G9601.1 ACACATTTTATTATACCTAA 2 2 2 14 1 0.301029996 0 0 0 2 0 0 2 chr20:11905519-11905539 minimal NA NA NA UAUU minimal chr20 + 11906974 11906996 3'utr BTBD3 Ensembl G9603.1 TCTAATTTCTACATAATTATTG 15 6 14 148 0.933333333 1.146128036 0.466666667 0.333333333 0.6 6 1 0 14 chr20:11906974-11906996 minimal NA NA NA UAUU minimal chr1 - 3547346 3547383 3'utr WRAP73 Ensembl G961.1 ATAAAACTGTAGTTTTATTATTTAAAATAAATACTTG 5 3 5 56 1 0.698970004 0 0.25 0.4 3 0 0 5 chr1:3547346-3547383 minimal NA NA AUUUA UAUU minimal chr20 + 17469748 17469782 rRNA rRNA-LSU-rRNA_Hsa RepeatMasker G9610.1 AGCACAAGTGCACGTGTTAGGACCTGAAAGATGG 3 2 3 11 1 0.477121255 1 0 0 3 0 0 3 chr20:17469748-17469782 NA NA NA NA NA NA chr20 + 18148557 18148578 intron CSRP2BP Ensembl G9612.1 CACTTATCTCTTTTTTTCTTT 2 2 2 26 1 0.301029996 0.5 0 0 2 0 0 2 chr20:18148557-18148578 minimal NA NA NA NA NA chr20 + 18464333 18464355 3'utr POLR3F Ensembl G9614.1 AAAACATATTTTTTTTATTTAT 4 2 3 49 0.75 0.477121255 0.75 0 0 4 1 0 3 chr20:18464333-18464355 UUAUUUAU NA NA AUUUA UAUU minimal chr20 + 18487292 18487312 NoAnnotation G9616.1 CCTTAAACTATTAATAATTT 3 2 3 24 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr20:18487292-18487312 NA NA NA NA UAUU minimal chr20 + 18541507 18541533 3'utr SEC23B Ensembl G9617.1 TAACTCTTTAGATTATAATTTATTTG 23 3 23 284 1 1.361727836 0.043478261 0.272727273 0.652173913 8 0 0 23 chr20:18541507-18541533 minimal NA NA AUUUA UAUU minimal chr20 + 19302423 19302445 intron SLC24A3 Ensembl G9618.1 TATTCCTATATTCTTATTTCTC 3 2 2 36 0.666666667 0.301029996 0 0 0 3 1 0 2 chr20:19302423-19302445 minimal NA NA NA UAUU minimal chr20 + 20351213 20351239 repeat Low_complexity-AT_rich RepeatMasker G9621.1 TTATTTATTCTTTATTTATTTATATT 5 3 4 75 0.8 0.602059991 0.2 0 0 5 1 0 4 chr20:20351213-20351239 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr20 + 21285815 21285836 intron XRN2 Ensembl G9622.1 CATCTGGGATTTTATTATTAT 4 2 2 42 0.5 0.301029996 0 0.333333333 0.5 2 2 0 2 chr20:21285815-21285836 minimal NA NA NA UAUU minimal chr20 + 21320635 21320661 intron XRN2 Ensembl G9628.1 TTTCTACTTATATATTATTATTTTTG 3 2 3 44 1 0.477121255 0.333333333 0.5 0.666666667 1 0 0 3 chr20:21320635-21320661 minimal NA NA NA UAUU minimal chr20 + 21354906 21354928 intron XRN2 Ensembl G9631.1 ACCATTTTATTTATTTATTTTC 2 2 2 26 1 0.301029996 0 0 0 2 0 0 2 chr20:21354906-21354928 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr20 + 23335320 23335343 3'utr NXT1 Ensembl G9637.1 TAAACTTTTCTATTTTTCTACTT 4 3 4 47 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr20:23335320-23335343 NA NA NA NA UAUU minimal chr20 + 25428945 25428969 3'utr GINS1 Ensembl G9643.1 TCTTCTATTTCTCTTAATAATCTT 5 5 5 56 1 0.698970004 0 0 0 5 0 0 5 chr20:25428945-25428969 NA NA NA NA UAUU minimal chr20 + 25851810 25851834 NoAnnotation G9644.1 ATATAATTTATTTACCCATTCTCC 6 3 5 61 0.833333333 0.698970004 0 0 0 6 1 0 5 chr20:25851810-25851834 minimal NA NA AUUUA UAUU minimal chr20 + 30754965 30754988 repeat Low_complexity-AT_rich RepeatMasker G9648.1 ACTTTTTAAATCATTATCATTAT 6 4 6 63 1 0.77815125 0 0.2 0.333333333 4 0 0 6 chr20:30754965-30754988 minimal NA NA NA NA NA chr20 + 30824596 30824621 3'utr POFUT1 Ensembl G9649.1 TTTATGGGGGCATTCTCTTATTTAT 5 2 3 46 1 0.698970004 0 0.666666667 0.8 1 0 0 5 chr20:30824596-30824621 UUAUUUAU NA NA AUUUA UAUU minimal chr1 - 6281348 6281373 3'utr ICMT Ensembl G965.1 TAATTATTCTACTCTTCTTTTTACA 16 4 9 208 0.5625 0.954242509 0 0.363636364 0.5625 7 7 0 9 chr1:6281348-6281373 minimal NA NA NA UAUU minimal chr20 + 31025991 31026017 3'utr ASXL1 Ensembl G9652.1 TTTCTTATTTTTATATTTTTAACTCT 10 5 8 155 0.727272727 0.602059991 0 0 0 11 2 1 8 chr20:31025991-31026017 minimal NA NA NA UAUU minimal chr20 + 31437763 31437794 repeat Low_complexity-AT_rich RepeatMasker G9653.1 ATTTAAAATACTTCATTCCTTAACTCTCCCT 4 3 4 39 1 0.602059991 0 0 0 4 0 0 4 chr20:31437763-31437794 minimal NA NA AUUUA NA minimal chr20 + 31443536 31443572 NoAnnotation G9654.1 CTTATTTATCATGTTCATATTTATATTTTTCATAAT 6 4 6 70 1 0.77815125 0.166666667 0.25 0.5 3 0 0 6 chr20:31443536-31443572 UUAUUUAU NA NA AUUUA UAUU minimal chr20 + 31445969 31445996 NoAnnotation G9657.1 ACTTTTTATTCATCCATTCTTAATATT 3 3 3 41 1 0.477121255 0 0 0 3 0 0 3 chr20:31445969-31445996 minimal NA NA NA UAUU minimal chr1 - 6284553 6284574 3'utr ICMT Ensembl G966.1 CTACATACCTATTTTTTATAA 9 4 8 82 0.888888889 0.903089987 0 0.333333333 0.555555556 4 1 0 8 chr1:6284553-6284574 minimal NA NA NA UAUU minimal chr20 + 33765114 33765141 repeat Low_complexity-AT_rich RepeatMasker G9664.1 ATCAATTATTAATCAATTAATAATATT 7 5 7 63 1 0.84509804 0 0.4 0.571428571 3 0 0 7 chr20:33765114-33765141 minimal NA NA NA UAUU minimal chr20 + 34459765 34459788 intron PHF20 Ensembl G9666.1 TTAAATTAATCCTCTTTTTATAT 2 2 2 22 1 0.301029996 0 0 0 2 0 0 2 chr20:34459765-34459788 minimal NA NA NA NA NA chr1 - 6284574 6284596 3'utr ICMT Ensembl G967.1 CCCTTCATCTATTTAATCATAG 3 3 3 24 0.75 0.176091259 0 0 0 4 0 1 3 chr1:6284574-6284596 minimal NA NA AUUUA UAUU minimal chr20 + 35843406 35843429 intron RPN2 Ensembl G9670.1 TTTTATACCATTTTATTTATAAC 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr20:35843406-35843429 UUAUUUAU NA NA AUUUA UAUU minimal chr20 + 36367814 36367840 intron CTNNBL1 Ensembl G9673.1 ACTTATTTAATTATTTTCTATTAATG 4 2 2 53 0.5 0.301029996 0.25 0.333333333 0.5 2 2 0 2 chr20:36367814-36367840 minimal NA NA AUUUA UAUU minimal chr20 + 36718505 36718527 3'utr RPRD1B Ensembl G9675.1 ACTTTTTCTCCCACTTCATATT 2 2 2 20 1 0.301029996 0.5 0 0 2 0 0 2 chr20:36718505-36718527 NA NA NA NA UAUU minimal chr20 + 36719512 36719541 3'utr RPRD1B Ensembl G9676.1 TAAATCATTCTAATTTGGCAGGCTTATTT 4 3 4 40 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr20:36719512-36719541 minimal NA NA NA UAUU minimal chr20 + 37205963 37206000 3'utr RALGAPB Ensembl G9677.1 AACATATTTAGCACCTAATATTAATATTTAGTAGTCC 10 3 10 80 1 1 0.5 0.333333333 0.6 4 0 0 10 chr20:37205963-37206000 minimal NA NA AUUUA UAUU minimal chr1 - 6284649 6284675 3'utr ICMT Ensembl G968.1 CTTTAACCTCTTTATTTCTGTCCCCC 5 3 5 51 0.833333333 0.397940009 0 0.25 0.5 3 0 1 5 chr1:6284649-6284675 minimal NA NA NA UAUU minimal chr20 + 42091424 42091451 3'utr SRSF6 Ensembl G9686.1 CTTCTTCCATTATCTTATTTTCTTTGA 81 4 7 99 1 1.908485019 0.938271605 0.5 0.962962963 3 0 0 81 chr20:42091424-42091451 minimal NA NA NA UAUU minimal chr1 - 6590513 6590549 intron NOL9 Ensembl G969.1 TATTACTTCACATTTATTTATTTATTTATCTTTTTG 10 5 7 146 0.7 0.84509804 0 0.125 0.3 7 3 0 7 chr1:6590513-6590549 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr20 + 43121517 43121538 3'utr TTPAL Ensembl G9691.1 CATTTTCTTTTTTATTCTATT 6 2 4 84 0.666666667 0.602059991 0.333333333 0.5 0.666666667 2 2 0 4 chr20:43121517-43121538 minimal NA NA NA UAUU minimal chr20 + 44039216 44039237 repeat LINE-L4 RepeatMasker G9695.1 TATAAATAATAAACTAATAAT 15 3 7 97 0.533333333 0.903089987 0 0.333333333 0.6 6 7 0 8 chr20:44039216-44039237 NA NA NA NA NA NA chr20 + 47653166 47653186 3'utr ARFGEF2 Ensembl G9702.1 TATAATACTATTAAAATATC 3 2 3 21 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr20:47653166-47653186 NA NA NA NA UAUU minimal chr20 + 47684155 47684177 repeat Low_complexity-AT_rich RepeatMasker G9703.1 TTTAATTAATTATATATTTATA 2 2 2 23 1 0.301029996 0 0 0 2 0 0 2 chr20:47684155-47684177 minimal NA NA AUUUA UAUU minimal chr20 + 48808747 48808777 repeat Low_complexity-AT_rich RepeatMasker G9712.1 TAATTTTAATATTTTATTATATATATATAT 11 6 11 151 1 1.041392685 0 0.222222222 0.363636364 7 0 0 11 chr20:48808747-48808777 minimal NA NA NA UAUU minimal chr20 + 48809081 48809118 3'utr CEBPB Ensembl G9713.1 TCTTTTTTTGTATTATAAAAAATAATCTATTTCTATG 10 6 6 99 0.6 0.77815125 0.2 0 0 10 4 0 6 chr20:48809081-48809118 minimal NA NA NA UAUU minimal chr20 + 48809170 48809191 3'utr CEBPB Ensembl G9714.1 AACACTTTTAATAAACTTTTT 4 2 2 38 0.4 0 0 0.25 0.4 3 2 1 2 chr20:48809170-48809191 NA NA NA NA NA NA chr20 + 49368964 49368985 3'utr PARD6B Ensembl G9716.1 TTTATCACTATTAATTTTATG 9 4 8 99 0.888888889 0.903089987 1 0.4 0.666666667 3 1 0 8 chr20:49368964-49368985 minimal NA NA NA UAUU minimal chr20 + 49369157 49369179 3'utr PARD6B Ensembl G9717.1 TTATTTATTAATTAACTTTATG 3 3 3 35 1 0.477121255 0.666666667 0 0 3 0 0 3 chr20:49369157-49369179 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr20 + 49370155 49370179 3'utr PARD6B Ensembl G9718.1 TATTTTACTACAATTTTATTATAA 3 2 2 36 0.666666667 0.301029996 0.333333333 0 0 3 1 0 2 chr20:49370155-49370179 minimal NA NA NA UAUU minimal chr20 + 52835686 52835708 coding PFDN4 Ensembl G9720.1 TAAACATTTTATAATACTTTTT 6 3 3 68 0.5 0.477121255 0 0.2 0.333333333 4 3 0 3 chr20:52835686-52835708 minimal NA NA NA NA NA chr20 + 54972832 54972853 coding CSTF1 Ensembl G9722.1 ATTATACTCTTAAATTATTTG 41 6 36 415 0.87804878 1.556302501 0.146341463 0.777777778 0.951219512 2 5 0 36 chr20:54972832-54972853 minimal NA NA NA UAUU minimal chr20 + 54979298 54979318 3'utr CSTF1 Ensembl G9723.1 CTCAGATCTGCAACTTTATT 4 2 4 28 1 0.602059991 0.25 0.333333333 0.5 2 0 0 4 chr20:54979298-54979318 minimal NA NA NA UAUU minimal chr20 + 55984317 55984344 3'utr RBM38 Ensembl G9727.1 CTAATCTCATCATAATATTTTTATTAG 14 6 14 141 0.933333333 0.84509804 0.066666667 0.076923077 0.2 12 0 1 14 chr20:55984317-55984344 minimal NA NA NA UAUU minimal chr20 + 56942427 56942448 3'utr RAB22A Ensembl G9728.1 CCATACTTTTAAATAATATTG 4 3 4 32 1 0.602059991 0.75 0.333333333 0.5 2 0 0 4 chr20:56942427-56942448 NA NA NA NA UAUU minimal chr20 + 57019995 57020015 3'utr VAPB Ensembl G9732.1 CATATTTAACTTATTTAATG 7 3 5 65 0.714285714 0.698970004 1 0.75 0.857142857 1 2 0 5 chr20:57019995-57020015 minimal NA NA AUUUA UAUU minimal chr20 + 60756679 60756702 3'utr SS18L1 Ensembl G9744.1 TACATTTATTTCCTAATTTATAC 4 3 4 42 1 0.602059991 0 0 0 4 0 0 4 chr20:60756679-60756702 minimal NA NA AUUUA UAUU minimal chr20 + 61431631 61431653 3'utr C20orf20 Ensembl G9746.1 TATTTCACTATTTAATTTTTAA 12 6 12 144 1 1.079181246 0.583333333 0.142857143 0.5 6 0 0 12 chr20:61431631-61431653 minimal NA NA AUUUA UAUU minimal chr20 + 62521990 62522013 3'utr TPD52L2 Ensembl G9748.1 CTTTATTTCTTTCTAATTTTTAT 4 2 2 59 0.5 0.301029996 0 0 0 4 2 0 2 chr20:62521990-62522013 minimal NA NA NA UAUU minimal chr20 - 418480 418504 3'utr TBC1D20 Ensembl G9750.1 TACTTTTATTACTATTTTTAGAAT 19 3 19 229 1 1.278753601 0 0.571428571 0.842105263 3 0 0 19 chr20:418480-418504 minimal NA NA NA UAUU minimal chr20 - 455200 455226 NoAnnotation G9751.1 TATTTACTTTTAAAACTATATTTATG 5 4 4 66 0.8 0.602059991 0 0 0 5 1 0 4 chr20:455200-455226 minimal NA NA AUUUA UAUU minimal chr20 - 462708 462736 3'utr CSNK2A1 Ensembl G9752.1 TAACTTTATCAAGGTGGTGGCTTTAGTG 4 2 4 32 1 0.602059991 0 1 1 0 0 0 4 chr20:462708-462736 minimal NA NA NA NA NA chr20 - 2810370 2810394 NoAnnotation G9760.1 ATACTTTTTTCTTTCTTTATTATT 2 2 2 31 1 0.301029996 0 0 0 2 0 0 2 chr20:2810370-2810394 minimal NA NA NA UAUU minimal chr20 - 2852189 2852222 NoAnnotation G9762.1 CCTTATATCTAATTTACACTATTATTTCTTAAT 3 2 2 35 0.666666667 0.301029996 0 0 0 3 1 0 2 chr20:2852189-2852222 minimal NA NA AUUUA UAUU minimal chr20 - 3127180 3127221 3'utr FASTKD5 Ensembl G9763.1 TATACATGTTACTCTTAGTAAATAATAAACATCTTAATATG 16 7 16 118 1 1.204119983 0 0.272727273 0.5 8 0 0 16 chr20:3127180-3127221 NA NA NA NA NA NA chr20 - 3230038 3230063 3'utr C20orf194 Ensembl G9766.1 CCTTCAATTTATTTTTATATTATTT 7 5 6 92 0.857142857 0.77815125 0 0 0 7 1 0 6 chr20:3230038-3230063 minimal NA NA AUUUA UAUU minimal chr20 - 5095771 5095800 3'utr PCNA Ensembl G9769.1 TAAATAACCTATTTTTTTCTCTATTCTCT 24 6 18 277 0.75 1.255272505 0 0.277777778 0.458333333 13 6 0 18 chr20:5095771-5095800 NA NA NA NA UAUU minimal chr20 - 10619464 10619490 3'utr JAG1 Ensembl G9777.1 CCTTAAAACATCATTCCTTTTTATTT 4 2 4 43 1 0.602059991 0 0.5 0.75 1 0 0 4 chr20:10619464-10619490 minimal NA NA NA UAUU minimal chr20 - 10619656 10619680 3'utr JAG1 Ensembl G9779.1 ACTTTATTATTTATTTTTTTTAAT 3 2 3 46 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr20:10619656-10619680 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr1 - 8925496 8925524 coding ENO1 Ensembl G978.1 ACTGCTATTGGGAAAGCTGGCTACACTG 5 2 2 31 0.333333333 0 0 0.2 0.333333333 4 3 1 2 chr1:8925496-8925524 NA NA NA NA UAUU minimal chr20 - 13695071 13695100 3'utr ESF1 Ensembl G9790.1 TTTAAATAACTATTAAAATAATTTATTTT 6 3 5 72 0.833333333 0.698970004 0 0.2 0.333333333 4 1 0 5 chr20:13695071-13695100 minimal NA NA AUUUA UAUU minimal chr20 - 13695369 13695392 3'utr ESF1 Ensembl G9791.1 AAAATTTTTCTCCATAAATAATT 2 2 2 16 1 0.301029996 0 0 0 2 0 0 2 chr20:13695369-13695392 NA NA NA NA NA NA chr20 - 14305959 14305991 3'utr FLRT3 Ensembl G9792.1 AACACAATTCTATATTTTAGTATTTTTTAGTA 11 3 11 128 1 1.041392685 0 0.5 0.727272727 3 0 0 11 chr20:14305959-14305991 NA NA NA NA UAUU minimal chr20 - 17929667 17929688 intron SNX5 Ensembl G9797.1 TCTTCATAATATATATTTTAT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr20:17929667-17929688 minimal NA NA NA UAUU minimal chr20 - 17943497 17943518 snoRNA SNORD17 Ensembl G9802.1 TTCTAGGAACTTGAGGCTATG 14 2 2 94 0.133333333 0 0 0.25 0.6 6 12 1 2 chr20:17943497-17943518 NA NA NA NA NA NA chr20 - 23377450 23377477 intron NAPB Ensembl G9811.1 CATCATTTAATTAAACTCTTATTTATA 9 5 7 110 0.777777778 0.84509804 0 0.5 0.666666667 3 2 0 7 chr20:23377450-23377477 UUAUUUAU NA NA AUUUA UAUU minimal chr20 - 23608192 23608213 repeat LINE-L1MB8 RepeatMasker G9812.1 CAACTCTACTCATATTTATAT 3 3 3 22 1 0.477121255 0 0 0 3 0 0 3 chr20:23608192-23608213 minimal NA NA AUUUA UAUU minimal chr20 - 26190222 26190244 NoAnnotation G9816.1 ACTTGCGGGCGGCCCCCCTCCG 10 2 3 27 0.157894737 -0.522878745 0.105263158 0.1875 0.315789474 13 7 9 3 chr20:26190222-26190244 NA NA NA NA NA NA chr1 - 10516591 10516623 3'utr DFFA Ensembl G982.1 TATCTTTAATAAATAACCACATTATTTAGCTG 9 4 7 82 0.7 0.544068044 0 0.111111111 0.2 8 2 1 7 chr1:10516591-10516623 minimal NA NA AUUUA UAUU minimal chr20 - 33962764 33962792 intron UQCC Ensembl G9830.1 TCAACTCTTAAATAATTTATTTTTAGAT 4 3 4 45 1 0.602059991 0 0 0 4 0 0 4 chr20:33962764-33962792 minimal NA NA AUUUA UAUU minimal chr20 - 34224701 34224725 intron CPNE1 Ensembl G9831.1 CATACTCTTCCTATTATTATTATT 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr20:34224701-34224725 minimal NA NA NA UAUU minimal chr20 - 34238755 34238782 3'utr RBM12 Ensembl G9834.1 TATTTCCTATTAAACTATATATATATA 10 4 8 99 0.727272727 0.602059991 0 0.25 0.454545455 6 2 1 8 chr20:34238755-34238782 NA NA NA NA UAUU minimal chr20 - 34241852 34241872 coding RBM12 Ensembl G9835.1 ATAGTATTTATATAGCTTAT 3 2 3 25 1 0.477121255 0 0.5 0.666666667 1 0 0 3 chr20:34241852-34241872 minimal NA NA AUUUA UAUU minimal chr20 - 34300609 34300639 intron RBM39 Ensembl G9837.1 AAAAAATATTTATAATATTAGAATTTAGAA 3 2 3 25 1 0.477121255 0 0 0 3 0 0 3 chr20:34300609-34300639 minimal NA NA AUUUA UAUU minimal chr20 - 34319235 34319257 intron RBM39 Ensembl G9839.1 AAATTTGGATGTGGATATTTAA 3 3 3 24 1 0.477121255 0 0 0 3 0 0 3 chr20:34319235-34319257 minimal NA NA AUUUA UAUU minimal chr20 - 34327190 34327215 intron RBM39 Ensembl G9840.1 ATAACTTTTAATATCTAAACTATAT 8 5 5 73 0.75 0.77815125 0 0 0 8 2 0 6 chr20:34327190-34327215 NA NA NA NA NA NA chr20 - 34636208 34636233 NoAnnotation G9843.1 TATATATAACGGACAAATTAGTCCC 24 4 20 139 0.958333333 1.361727836 0 0.625 0.875 3 1 0 23 chr20:34636208-34636233 NA NA NA NA NA NA chr20 - 35413752 35413791 intron KIAA0889 Ensembl G9845.1 TTTACTTTATTTTAATAATTTAATTTACCCCAAAGTCCC 6 6 6 78 0.857142857 0.477121255 0 0 0 7 0 1 6 chr20:35413752-35413791 minimal NA NA AUUUA UAUU minimal chr20 - 35413797 35413821 intron KIAA0889 Ensembl G9846.1 AATTTTTCCTACTATAAATATTTA 9 3 9 93 1 0.954242509 0 0.333333333 0.555555556 4 0 0 9 chr20:35413797-35413821 minimal NA NA AUUUA UAUU minimal chr20 - 35625189 35625209 3'utr RBL1 Ensembl G9847.1 TATTTTTATCTTCATTATTG 2 2 2 24 1 0.301029996 0 0 0 2 0 0 2 chr20:35625189-35625209 minimal NA NA NA UAUU minimal chr20 - 35625894 35625919 3'utr RBL1 Ensembl G9848.1 CCTCATAATTCTAATATATTTAATA 12 5 11 105 0.916666667 1.041392685 0 0.1 0.25 9 1 0 11 chr20:35625894-35625919 minimal NA NA AUUUA UAUU minimal chr20 - 35626142 35626163 3'utr RBL1 Ensembl G9849.1 ACATTAACTTAATTATATATG 4 2 3 33 0.75 0.477121255 0 0 0 4 1 0 3 chr20:35626142-35626163 minimal NA NA NA NA NA chr1 - 16450886 16450918 3'utr EPHA2 Ensembl G985.1 AATCTTAATTTATTATTTTTTTTATATTTATT 17 7 12 274 0.705882353 1.079181246 0 0.133333333 0.235294118 13 5 0 12 chr1:16450886-16450918 minimal NA UAUUUAUU AUUUA UAUU UAUUUAUU chr20 - 36065455 36065479 NoAnnotation G9850.1 ATGGAGAGTTTGATCCTGGCTCAG 40 2 19 239 0.263888889 -0.239760339 0.319444444 0.361702128 0.583333333 30 21 32 19 chr20:36065455-36065479 NA NA NA NA NA NA chr1 - 16451609 16451632 3'utr EPHA2 Ensembl G986.1 GCCACTGGGGACTTTATTTATTT 2 2 2 15 1 0.301029996 1 0 0 2 0 0 2 chr1:16451609-16451632 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU chr20 - 40206562 40206586 intron CHD6 Ensembl G9863.1 CATCTACTAATTTATTTAATCCTT 4 3 4 38 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr20:40206562-40206586 minimal NA NA AUUUA UAUU minimal chr20 - 42935205 42935231 3'utr FITM2 Ensembl G9864.1 CTAATCTATTTTTCAAATATATATTT 8 3 4 92 0.5 0.602059991 0 0.142857143 0.25 6 4 0 4 chr20:42935205-42935231 NA NA NA NA UAUU minimal chr20 - 43954769 43954789 3'utr SDC4 Ensembl G9866.1 TATATTATTATTCTTCCTTG 3 3 3 25 1 0.477121255 0 0 0 3 0 0 3 chr20:43954769-43954789 minimal NA NA NA UAUU minimal chr20 - 43954886 43954913 3'utr SDC4 Ensembl G9867.1 CCTTGGCCCTTTCTGAAGCTGCTTCCT 14 6 13 91 0.928571429 1.113943352 0 0.333333333 0.571428571 6 1 0 13 chr20:43954886-43954913 NA NA NA NA NA NA chr20 - 45837994 45838017 3'utr ZMYND8 Ensembl G9874.1 TATTAAACTTAAATATCTTTTTG 2 2 2 21 1 0.301029996 0 0 0 2 0 0 2 chr20:45837994-45838017 NA NA NA NA UAUU minimal chr20 - 48249551 48249572 3'utr B4GALT5 Ensembl G9878.1 TCATTACATTATTTACTCATG 2 2 2 18 1 0.301029996 0 0 0 2 0 0 2 chr20:48249551-48249572 minimal NA NA AUUUA UAUU minimal chr20 - 48250956 48250983 3'utr B4GALT5 Ensembl G9879.1 TTTTCCATAAAACATATTTATATATTG 17 7 16 157 0.941176471 1.204119983 0 0.230769231 0.411764706 10 1 0 16 chr20:48250956-48250983 minimal NA NA AUUUA UAUU minimal chr20 - 49506923 49506946 3'utr ADNP Ensembl G9882.1 ATCTTTATTTTCCCTTTGTATTC 10 3 7 124 0.7 0.84509804 0 0.285714286 0.5 5 3 0 7 chr20:49506923-49506946 minimal NA NA NA UAUU minimal chr20 - 50691861 50691888 NoAnnotation G9886.1 CTTTAAAAAATTTTTTTATTAATATTT 4 3 3 60 0.75 0.477121255 0 0 0 4 1 0 3 chr20:50691861-50691888 minimal NA NA NA UAUU minimal chr20 - 50700051 50700074 NoAnnotation G9887.1 CATCTTTCCTTCAAATACTCTTT 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr20:50700051-50700074 NA NA NA NA NA NA chr1 - 17345311 17345333 3'utr SDHB Ensembl G990.1 AACATAATTTATATCTAATTTG 2 2 2 17 1 0.301029996 0 0 0 2 0 0 2 chr1:17345311-17345333 minimal NA NA AUUUA NA minimal chr20 - 61510294 61510318 3'utr DIDO1 Ensembl G9902.1 TTATCTTTTCCAATAACTTTATTG 5 2 4 58 0.8 0.602059991 0 0.25 0.4 3 1 0 4 chr20:61510294-61510318 minimal NA NA NA UAUU minimal chr20 - 61826784 61826807 3'utr YTHDF1 Ensembl G9905.1 CCTTAATAAACAATACTATTTAG 12 3 12 78 1 1.079181246 0 0.4 0.75 3 0 0 12 chr20:61826784-61826807 minimal NA NA AUUUA UAUU minimal chr20 - 61827703 61827729 3'utr YTHDF1 Ensembl G9907.1 ACTTCATATTTCTCATCCCTTTATTG 3 3 3 31 1 0.477121255 0 0 0 3 0 0 3 chr20:61827703-61827729 minimal NA NA NA UAUU minimal chr20 - 62704577 62704606 3'utr RGS19 Ensembl G9912.1 TTTTCATATTTATCTCTATCCCTAACCCC 13 4 12 146 0.857142857 0.77815125 0 0.2 0.428571429 8 1 1 12 chr20:62704577-62704606 minimal NA NA AUUUA UAUU minimal chr21 + 9826993 9827042 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9922.1 CTCTACCTACCTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCA 415 11 18 3083 0.036585366 -0.636822098 0.325203252 0.3 0.758130081 119 397 77 18 chr21:9826993-9827042 NA NA NA NA NA NA chr21 + 9827070 9827189 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9922.2 CACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 3340 30 221 24810 0.057503153 -0.438639486 0.587641866 0.363354037 0.844892812 615 3112 625 228 chr21:9827070-9827189 minimal NA NA NA NA NA chr21 + 9827288 9827333 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9924.1 TTTGGTGACTCTAGATAACCTCGGGCTGATCGCACGCCCCCCGTG 3502 2 3445 10805 0.974816072 2.018675286 0.64204867 0.537313433 0.98245614 62 57 32 3445 chr21:9827288-9827333 NA NA NA NA NA NA chr1 - 17733297 17733327 3'utr RCC2 Ensembl G993.1 TCTTATTATTTTTTTTATATATATATTTCT 61 15 50 957 0.819672131 1.698970004 0 0.275 0.524590164 29 11 0 50 chr1:17733297-17733327 minimal NA NA NA UAUU minimal chr21 + 18942002 18942027 repeat Low_complexity-AT_rich RepeatMasker G9940.1 TTAACTTTTATAATTTATCTTATTT 5 3 5 63 1 0.698970004 0 0.25 0.4 3 0 0 5 chr21:18942002-18942027 minimal NA NA AUUUA UAUU minimal chr21 + 27142047 27142073 repeat Low_complexity-AT_rich RepeatMasker G9948.1 AATAAATTTATATTAATAAATTACTA 3 2 3 28 1 0.477121255 0 0 0 3 0 0 3 chr21:27142047-27142073 minimal NA NA AUUUA UAUU minimal chr21 + 27143167 27143189 3'utr GABPA Ensembl G9949.1 TTCTCAATTCATTCATATTATT 4 2 4 42 1 0.602059991 0 0.333333333 0.5 2 0 0 4 chr21:27143167-27143189 minimal NA NA NA UAUU minimal chr21 + 27228119 27228144 rRNA rRNA-SSU-rRNA_Hsa RepeatMasker G9952.1 CCACCCGAGATTGAGCAATAACAGG 1306 3 17 3900 0.011265739 -1.079181246 0.970841617 0.65060241 0.980781975 29 1289 203 17 chr21:27228119-27228144 NA NA NA NA NA NA chr21 + 28362836 28362856 NoAnnotation G9953.1 ATTCTATATACTTACTATAT 6 2 4 56 0.666666667 0.602059991 0 0.5 0.666666667 2 2 0 4 chr21:28362836-28362856 NA NA NA NA NA NA chr21 + 30418442 30418471 intron USP16 Ensembl G9958.1 CCTAAATAACTTTTCTTCATAATTTATTT 2 2 2 28 1 0.301029996 0 0 0 2 0 0 2 chr21:30418442-30418471 minimal NA NA AUUUA UAUU minimal chr21 + 30717558 30717579 3'utr BACH1 Ensembl G9961.1 CCTATTTTAACATTAACTTCT 3 2 2 28 0.666666667 0.301029996 0 0 0 3 1 0 2 chr21:30717558-30717579 NA NA NA NA UAUU minimal chr21 + 30717804 30717827 3'utr BACH1 Ensembl G9962.1 TAAAATAACATTACCTTATTTTT 11 3 11 85 1 1.041392685 0 0.4 0.727272727 3 0 0 11 chr21:30717804-30717827 minimal NA NA NA UAUU minimal chr21 + 30718241 30718264 3'utr BACH1 Ensembl G9964.1 ATTTTTTTATATCTTTCATAATA 4 3 3 53 0.75 0.477121255 0 0 0 4 1 0 3 chr21:30718241-30718264 minimal NA NA NA NA NA chr21 + 30718343 30718373 3'utr BACH1 Ensembl G9965.1 TTTCATAGTATTTAATTTACATTTCTCCCT 7 3 7 75 0.875 0.544068044 0.375 0.4 0.625 3 0 1 7 chr21:30718343-30718373 minimal NA NA AUUUA UAUU minimal chr21 + 33374031 33374055 repeat Low_complexity-AT_rich RepeatMasker G9970.1 ATTCTTTATTATTTTATTATATTT 7 5 7 107 1 0.84509804 0 0.2 0.428571429 4 0 0 7 chr21:33374031-33374055 minimal NA NA NA UAUU minimal chr21 + 34669451 34669475 3'utr IL10RB Ensembl G9972.1 AATTTATTTTTCTACCTATATATG 6 4 6 70 1 0.77815125 0.333333333 0.2 0.333333333 4 0 0 6 chr21:34669451-34669475 minimal NA NA AUUUA UAUU minimal chr21 + 34809736 34809768 3'utr IFNGR2 Ensembl G9976.1 TAATTAATCTTGTAAATATACTCCTAGTAATT 7 4 5 53 0.857142857 0.77815125 0.428571429 0.166666667 0.285714286 5 1 0 6 chr21:34809736-34809768 NA NA NA NA NA NA chr21 + 34926123 34926157 coding SON Ensembl G9977.1 TATAAATATAGACCTTAATATAAATAATCATTTA 9 6 9 68 1 0.954242509 0 0.142857143 0.333333333 6 0 0 9 chr21:34926123-34926157 minimal NA NA AUUUA NA minimal chr21 + 34930181 34930210 intron SON Ensembl G9978.1 TAACATATATATTTTAAACACACTTATTT 6 3 6 61 1 0.77815125 0 0 0 6 0 0 6 chr21:34930181-34930210 minimal NA NA NA UAUU minimal chr21 + 34934507 34934530 intron SON Ensembl G9984.1 AATTTATTATTTATACAATTAGT 13 2 13 140 1 1.113943352 0.846153846 0.75 0.923076923 1 0 0 13 chr21:34934507-34934530 UUAUUUAU NA NA AUUUA UAUU minimal chr21 + 35474030 35474050 3'utr SLC5A3 Ensembl G9992.1 ACTCATTAAATATAATTATG 3 3 3 21 1 0.477121255 1 0 0 3 0 0 3 chr21:35474030-35474050 minimal NA NA NA NA NA chr21 + 38450866 38450888 intron TTC3 Ensembl G9998.1 ATTCTATCTTAACTTATTTATT 6 4 4 74 0.666666667 0.602059991 0.333333333 0 0 6 2 0 4 chr21:38450866-38450888 UUAUUUAUU UUAUUUAUU UAUUUAUU AUUUA UAUU UUAUUUAUU