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{"sheet":"1","index":1,"n_rows":164,"n_cols":11,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",null," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","No GO Term Enrichment",null,null,"ATTED2 Co-expression network"]
["AT5G35935","AT5G35935.1","transposable element gene; copia-like retrotransposon family, has a 2.0e-232 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)","transposable_element_gene",null,null," ",{"$nulls":3},"none"]
["AT3G59940","AT3G59940.1","Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G44130.1); Has 2977 Blast hits to 2510 proteins in 188 species: Archae - 4; Bacteria - 251; Metazoa - 1720; Fungi - 24; Plants - 858; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G38830","AT4G38830.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 26 (CRK26)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 26 (CRK26)"," "]
["AT3G45640","AT3G45640.1","Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.","protein_coding","MITOGEN-ACTIVATED PROTEIN KINASE 3 (MPK3)","MITOGEN-ACTIVATED PROTEIN KINASE 3 (ATMPK3); (ATMAPK3);MITOGEN-ACTIVATED PROTEIN KINASE 3 (MPK3)"," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type",null,"All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G12910","AT3G12910.1","NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G61470","AT1G61470.1","Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G27820.1); Has 904 Blast hits to 904 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 275; Fungi - 148; Plants - 359; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G31345","AT2G31345.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06135.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","2.30e-08 ","7/12 (58.3%) ","422/30324 (1.4%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
["AT3G48650","AT3G48650.1","pseudogene, At14a-related protein, similar to At14a (GI:11994571 and GI:11994573) (Arabidopsis thaliana)","pseudogene",null,null," ","GO:0010243 response to organonitrogen compound ","P ","2.99e-08 ","7/12 (58.3%) ","438/30324 (1.4%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
["AT1G22810","AT1G22810.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","1.83e-06 ","7/12 (58.3%) ","792/30324 (2.6%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
["AT3G02840","AT3G02840.1","ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to other organism, response to ozone; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 423 Blast hits to 423 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 422; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009693 ethylene biosynthetic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT2G20562","AT2G20562.1","unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043450 alkene biosynthetic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT3G01830","AT3G01830.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 5650 Blast hits to 5606 proteins in 833 species: Archae - 0; Bacteria - 6; Metazoa - 2238; Fungi - 938; Plants - 1778; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink).","protein_coding",null,null," ","GO:1900673 olefin metabolic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT4G23810","AT4G23810.1","member of WRKY Transcription Factor; Group III","protein_coding"," (WRKY53)"," (ATWRKY53); (WRKY53)"," ","GO:1900674 olefin biosynthetic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT1G30370","AT1G30370.1","Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability.","protein_coding","DAD1-LIKE ACYLHYDROLASE (DLAH)","DAD1-LIKE ACYLHYDROLASE (DLAH)"," ","GO:0009692 ethylene metabolic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT4G17490","AT4G17490.1","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ATERF6); (ERF-6-6);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6)"," ","GO:0043449 cellular alkene metabolic process ","P ","3.62e-05 ","4/12 (33.3%) ","120/30324 (0.4%) ","FBS1 AT3G01830 PUB24 AT3G02840"," "]
["AT1G61340","AT1G61340.2","Encodes a F-box protein induced by various biotic or abiotic stress.","protein_coding","F-BOX STRESS INDUCED 1 (FBS1)"," (ATFBS1);F-BOX STRESS INDUCED 1 (FBS1)"," ","GO:0009753 response to jasmonic acid stimulus ","P ","2.30e-04 ","5/12 (41.7%) ","482/30324 (1.6%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24"," "]
["AT3G11840","AT3G11840.1","Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.","protein_coding","PLANT U-BOX 24 (PUB24)","PLANT U-BOX 24 (PUB24)"," ","GO:0009620 response to fungus ","P ","4.82e-04 ","5/12 (41.7%) ","560/30324 (1.8%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840"," "]
["AT5G59820","AT5G59820.1","Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.","protein_coding","RESPONSIVE TO HIGH LIGHT 41 (RHL41)","RESPONSIVE TO HIGH LIGHT 41 (RHL41); (ATZAT12); (ZAT12)"," ","GO:0009719 response to endogenous stimulus ","P ","6.69e-04 ","7/12 (58.3%) ","1879/30324 (6.2%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0071310 cellular response to organic substance ","P ","1.22e-03 ","6/12 (50.0%) ","1261/30324 (4.2%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0070887 cellular response to chemical stimulus ","P ","2.68e-03 ","6/12 (50.0%) ","1445/30324 (4.8%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","3.31e-03 ","4/12 (33.3%) ","373/30324 (1.2%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0006612 protein targeting to membrane ","P ","3.45e-03 ","4/12 (33.3%) ","377/30324 (1.2%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0090150 establishment of protein localization to membrane ","P ","3.53e-03 ","4/12 (33.3%) ","379/30324 (1.2%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0072657 protein localization to membrane ","P ","3.53e-03 ","4/12 (33.3%) ","379/30324 (1.2%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0050832 defense response to fungus ","P ","3.67e-03 ","4/12 (33.3%) ","383/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0051707 response to other organism ","P ","3.79e-03 ","6/12 (50.0%) ","1535/30324 (5.1%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0009607 response to biotic stimulus ","P ","3.81e-03 ","6/12 (50.0%) ","1536/30324 (5.1%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0080135 regulation of cellular response to stress ","P ","3.83e-03 ","4/12 (33.3%) ","387/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:1901700 response to oxygen-containing compound ","P ","4.03e-03 ","7/12 (58.3%) ","2459/30324 (8.1%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0043067 regulation of programmed cell death ","P ","4.32e-03 ","4/12 (33.3%) ","399/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0035556 intracellular signal transduction ","P ","4.36e-03 ","4/12 (33.3%) ","400/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 ERF6"," "]
[{"$nulls":6}," ","GO:0045730 respiratory burst ","P ","4.37e-03 ","3/12 (25.0%) ","122/30324 (0.4%) ","AT3G01830 PUB24 ERF6"," "]
[{"$nulls":6}," ","GO:0002679 respiratory burst involved in defense response ","P ","4.37e-03 ","3/12 (25.0%) ","122/30324 (0.4%) ","AT3G01830 PUB24 ERF6"," "]
[{"$nulls":6}," ","GO:0009626 plant-type hypersensitive response ","P ","4.62e-03 ","4/12 (33.3%) ","406/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0010941 regulation of cell death ","P ","4.67e-03 ","4/12 (33.3%) ","407/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0034050 host programmed cell death induced by symbiont ","P ","4.67e-03 ","4/12 (33.3%) ","407/30324 (1.3%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0007165 signal transduction ","P ","5.13e-03 ","6/12 (50.0%) ","1618/30324 (5.3%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0045088 regulation of innate immune response ","P ","5.53e-03 ","4/12 (33.3%) ","425/30324 (1.4%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0050776 regulation of immune response ","P ","5.63e-03 ","4/12 (33.3%) ","427/30324 (1.4%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0002682 regulation of immune system process ","P ","5.79e-03 ","4/12 (33.3%) ","430/30324 (1.4%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0009725 response to hormone stimulus ","P ","5.98e-03 ","6/12 (50.0%) ","1662/30324 (5.5%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 ERF6"," "]
[{"$nulls":6}," ","GO:0044700 single organism signaling ","P ","7.11e-03 ","6/12 (50.0%) ","1713/30324 (5.6%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0023052 signaling ","P ","7.13e-03 ","6/12 (50.0%) ","1714/30324 (5.7%) ","AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0012501 programmed cell death ","P ","7.54e-03 ","4/12 (33.3%) ","460/30324 (1.5%) ","AT3G01830 WRKY53 PUB24 AT3G02840"," "]
[{"$nulls":6}," ","GO:0002376 immune system process ","P ","9.41e-03 ","5/12 (41.7%) ","1032/30324 (3.4%) ","AT3G01830 WRKY53 PUB24 AT3G02840 ERF6"," "]
[{"$nulls":6}," ","GO:0009751 response to salicylic acid stimulus ","P ","9.43e-03 ","4/12 (33.3%) ","487/30324 (1.6%) ","FBS1 AT3G01830 WRKY53 PUB24"," "]
[{"$nulls":6}," ","GO:0010033 response to organic substance ","P ","9.62e-03 ","7/12 (58.3%) ","2805/30324 (9.3%) ","FBS1 AT3G01830 RHL41 WRKY53 PUB24 AT3G02840 ERF6"," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G29430","AT1G29430.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G27780.1); Has 636 Blast hits to 622 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 636; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT2G21210","AT2G21210.1","Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G38860","AT4G38860.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G21220.1); Has 1286 Blast hits to 1273 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1285; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009733 response to auxin stimulus ","P ","1.84e-25 ","17/22 (77.3%) ","442/30324 (1.5%) ","AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT1G29450","AT1G29450.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29500.1); Has 675 Blast hits to 661 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 675; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009725 response to hormone stimulus ","P ","1.82e-17 ","18/22 (81.8%) ","1662/30324 (5.5%) ","MAKR6 AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT4G38840","AT4G38840.1","SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G21210.1); Has 1324 Blast hits to 1312 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1323; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","1.62e-16 ","18/22 (81.8%) ","1879/30324 (6.2%) ","MAKR6 AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT1G29500","AT1G29500.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29450.1); Has 853 Blast hits to 839 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 853; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","2.00e-13 ","18/22 (81.8%) ","2805/30324 (9.3%) ","MAKR6 AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT4G34760","AT4G34760.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","3.96e-11 ","18/22 (81.8%) ","3789/30324 (12.5%) ","MAKR6 AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT2G21220","AT2G21220.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT4G38860.1); Has 1403 Blast hits to 1386 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1402; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","6.06e-07 ","18/22 (81.8%) ","6619/30324 (21.8%) ","MAKR6 AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT1G78170","AT1G78170.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G29460","AT1G29460.1","SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29500.1); Has 775 Blast hits to 762 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT4G38825","AT4G38825.1","SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G18030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT1G29490","AT1G29490.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29420.1); Has 690 Blast hits to 677 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 690; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G18030","AT5G18030.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0005739 mitochondrion ","C ","1.38e-07 ","15/22 (68.2%) ","3561/30324 (11.7%) ","AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 AT4G38825 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR68"," "]
["AT1G49200","AT1G49200.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 8744 Blast hits to 8720 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2273; Fungi - 539; Plants - 4805; Viruses - 46; Other Eukaryotes - 1081 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044444 cytoplasmic part ","C ","4.86e-04 ","18/22 (81.8%) ","9890/30324 (32.6%) ","AT4G38840 AT2G21210 AT1G29500 SAUR63 AT1G29450 AT5G18030 SAUR20 AT4G38860 SAUR75 AT1G29490 AT4G38825 SAUR19 AT1G29430 AT1G29460 AT4G34760 AT2G21220 SAUR24 SAUR68"," "]
["AT5G52900","AT5G52900.1","Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR)  gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6).","protein_coding","MEMBRANE-ASSOCIATED KINASE REGULATOR 6 (MAKR6)","MEMBRANE-ASSOCIATED KINASE REGULATOR 6 (MAKR6)"," ",{"$nulls":6}," "]
["AT2G32100","AT2G32100.1","ovate family protein 16 (OFP16); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 12 (TAIR:AT1G05420.1); Has 251 Blast hits to 251 proteins in 22 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","OVATE FAMILY PROTEIN 16 (OFP16)","OVATE FAMILY PROTEIN 16 (OFP16);RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16 (ATOFP16)"," ","  ",{"$nulls":5}," "]
["AT5G18010","AT5G18010.1","Encodes SAUR19 (small auxin up RNA 19).  Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223?1235 (PMID:21327815), At5g18010 is SAUR24.","protein_coding","SMALL AUXIN UP RNA 19 (SAUR19)","SMALL AUXIN UP RNA 19 (SAUR19);SMALL AUXIN UP RNA 24 (SAUR24)"," ",{"$nulls":6}," "]
["AT5G18020","AT5G18020.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G18080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","SMALL AUXIN UP RNA 20 (SAUR20)","SMALL AUXIN UP RNA 20 (SAUR20)"," ",{"$nulls":6}," "]
["AT5G18080","AT5G18080.1","Encodes SAUR24 (small auxin up RNA 24).  Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223?1235 (PMID:21327815), SAUR24 is At5g18010.","protein_coding","SMALL AUXIN UP RNA 24 (SAUR24)","SMALL AUXIN UP RNA 24 (SAUR24)"," ",{"$nulls":6}," "]
["AT1G29440","AT1G29440.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","SMALL AUXIN UP RNA 63 (SAUR63)","SMALL AUXIN UP RNA 63 (SAUR63)"," ",{"$nulls":6}," "]
["AT5G27780","AT5G27780.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","SMALL AUXIN UP RNA 75 (SAUR75)","SMALL AUXIN UP RNA 75 (SAUR75)"," ",{"$nulls":6}," "]
["AT1G29510","AT1G29510.1","SMALL AUXIN UPREGULATED 68 (SAUR68); CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29500.1); Has 748 Blast hits to 732 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 748; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","SMALL AUXIN UPREGULATED 68 (SAUR68)","SMALL AUXIN UPREGULATED 68 (SAUR68)"," ",{"$nulls":6}," "]
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{"sheet":"4","index":4,"n_rows":164,"n_cols":15,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G05250","AT5G05250.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT5G38005","AT5G38005.1","Unknown gene","other_rna",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G04223","AT4G04223.1","Unknown gene","other_rna",null,null," ","GO:0055072 iron ion homeostasis ","P ","1.91e-07 ","4/15 (26.7%) ","32/30324 (0.1%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT3G02480","AT3G02480.1","Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G38760.1); Has 213 Blast hits to 189 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 12; Plants - 190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0055076 transition metal ion homeostasis ","P ","4.54e-06 ","4/15 (26.7%) ","69/30324 (0.2%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT1G58320","AT1G58320.1","PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G68630.1); Has 648 Blast hits to 647 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 88; Plants - 508; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010106 cellular response to iron ion starvation ","P ","3.71e-05 ","4/15 (26.7%) ","116/30324 (0.4%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT2G30766","AT2G30766.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0055065 metal ion homeostasis ","P ","4.39e-05 ","4/15 (26.7%) ","121/30324 (0.4%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT1G12030","AT1G12030.1","Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT1G62420.1); Has 393 Blast hits to 391 proteins in 26 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 387; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009267 cellular response to starvation ","P ","6.60e-05 ","5/15 (33.3%) ","341/30324 (1.1%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT1G47400","AT1G47400.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042594 response to starvation ","P ","7.40e-05 ","5/15 (33.3%) ","349/30324 (1.2%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT1G47395","AT1G47395.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47400.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031669 cellular response to nutrient levels ","P ","8.05e-05 ","5/15 (33.3%) ","355/30324 (1.2%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT2G14247","AT2G14247.1","Expressed protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031667 response to nutrient levels ","P ","1.01e-04 ","5/15 (33.3%) ","372/30324 (1.2%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT3G56970","AT3G56970.1","Encodes a member of the basic helix-loop-helix transcription factor family protein.","protein_coding"," (BHLH038)"," (BHLH038);OBP3-RESPONSIVE GENE 3 (ORG2)"," ","GO:0031668 cellular response to extracellular stimulus ","P ","1.33e-04 ","5/15 (33.3%) ","393/30324 (1.3%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT3G56980","AT3G56980.1","Encodes a member of the basic helix-loop-helix transcription factor protein.","protein_coding"," (BHLH039)"," (BHLH039);OBP3-RESPONSIVE GENE 3 (ORG3)"," ","GO:0071496 cellular response to external stimulus ","P ","1.34e-04 ","5/15 (33.3%) ","394/30324 (1.3%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT5G04150","AT5G04150.1","BHLH101; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding"," (BHLH101)"," (BHLH101)"," ","GO:0009991 response to extracellular stimulus ","P ","1.65e-04 ","5/15 (33.3%) ","411/30324 (1.4%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT2G41240","AT2G41240.1","Encodes a member of the basic helix-loop-helix transcription factor family protein.","protein_coding","BASIC HELIX-LOOP-HELIX PROTEIN 100 (BHLH100)","BASIC HELIX-LOOP-HELIX PROTEIN 100 (BHLH100)"," ","GO:0055080 cation homeostasis ","P ","4.35e-04 ","4/15 (26.7%) ","215/30324 (0.7%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT5G14545","AT5G14545.1","Encodes a microRNA that targets both CSD and CytC oxidase family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UGUGUUCUCAGGUCACCCCUG. Down-regulated by biotic and abiotic stress.","miRNA","MICRORNA398B (MIR398B)","MICRORNA398B (MIR398B)"," ","GO:0050801 ion homeostasis ","P ","7.19e-04 ","4/15 (26.7%) ","244/30324 (0.8%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
["AT5G53450","AT5G53450.1","OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 595 Blast hits to 591 proteins in 152 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 309; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).","protein_coding","OBP3-RESPONSIVE GENE 1 (ORG1)","OBP3-RESPONSIVE GENE 1 (ORG1)"," ","GO:0048878 chemical homeostasis ","P ","1.44e-03 ","4/15 (26.7%) ","291/30324 (1.0%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
[{"$nulls":6}," ","GO:0042592 homeostatic process ","P ","3.85e-03 ","4/15 (26.7%) ","374/30324 (1.2%) ","BHLH101 BHLH100 bHLH38 bHLH39"," "]
[{"$nulls":6}," ","GO:0009605 response to external stimulus ","P ","4.67e-03 ","5/15 (33.3%) ","818/30324 (2.7%) ","MIR398B BHLH101 BHLH100 bHLH38 bHLH39"," "]
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{"sheet":"5","index":5,"n_rows":164,"n_cols":15,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G56060","AT1G56060.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 180 Blast hits to 180 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT2G20142","AT2G20142.1","Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G52760","AT5G52760.1","Copper transport protein family; BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT5G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009697 salicylic acid biosynthetic process ","P ","2.65e-09 ","8/26 (30.8%) ","210/30324 (0.7%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT5G39670","AT5G39670.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009696 salicylic acid metabolic process ","P ","4.29e-09 ","8/26 (30.8%) ","223/30324 (0.7%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT3G54150","AT3G54150.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G55450.1); Has 989 Blast hits to 984 proteins in 381 species: Archae - 6; Bacteria - 545; Metazoa - 68; Fungi - 151; Plants - 164; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","9.99e-09 ","10/26 (38.5%) ","580/30324 (1.9%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
["AT1G72920","AT1G72920.1","Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: response to wounding, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1); Has 1749 Blast hits to 1659 proteins in 68 species: Archae - 0; Bacteria - 41; Metazoa - 0; Fungi - 0; Plants - 1708; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042537 benzene-containing compound metabolic process ","P ","1.46e-08 ","8/26 (30.8%) ","260/30324 (0.9%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT1G13340","AT1G13340.1","Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 628 Blast hits to 628 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 130; Plants - 284; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","1.86e-08 ","9/26 (34.6%) ","422/30324 (1.4%) ","JAZ5 WRKY70 NAC036 ERF13 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
["AT2G34930","AT2G34930.1","disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","2.59e-08 ","9/26 (34.6%) ","438/30324 (1.4%) ","JAZ5 WRKY70 NAC036 ERF13 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
["AT1G24147","AT1G24147.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24148.1); Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035556 intracellular signal transduction ","P ","4.43e-07 ","8/26 (30.8%) ","400/30324 (1.3%) ","SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT3G54150"," "]
["AT5G22520","AT5G22520.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22530.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","8.24e-07 ","10/26 (38.5%) ","914/30324 (3.0%) ","SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT5G18470","AT5G18470.1","Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G67520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006955 immune response ","P ","8.78e-07 ","10/26 (38.5%) ","920/30324 (3.0%) ","SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT1G24145","AT1G24145.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","1.40e-06 ","12/26 (46.2%) ","1667/30324 (5.5%) ","AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340 AT1G72920"," "]
["AT2G04495","AT2G04495.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","2.63e-06 ","10/26 (38.5%) ","1032/30324 (3.4%) ","SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT4G18250","AT4G18250.1","receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016053 organic acid biosynthetic process ","P ","3.55e-06 ","10/26 (38.5%) ","1065/30324 (3.5%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
["AT1G09932","AT1G09932.1","Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT2G17280.2); Has 552 Blast hits to 552 proteins in 105 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 272; Plants - 167; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).","protein_coding",null,null," ","GO:0046394 carboxylic acid biosynthetic process ","P ","3.55e-06 ","10/26 (38.5%) ","1065/30324 (3.5%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
["AT4G11890","AT4G11890.3","Encodes a receptor-like cytosolic kinase ARCK1. Negatively controls abscisic acid and osmotic stress signal transduction.","protein_coding","ABA- AND  OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1 (ARCK1)","ABA- AND  OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1 (ARCK1)"," ","GO:1901698 response to nitrogen compound ","P ","4.63e-06 ","9/26 (34.6%) ","792/30324 (2.6%) ","JAZ5 WRKY70 NAC036 ERF13 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
["AT4G23160","AT4G23160.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8 (CRK8)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8 (CRK8)"," ","GO:0009620 response to fungus ","P ","6.12e-06 ","8/26 (30.8%) ","560/30324 (1.8%) ","JAZ5 AT2G34930 SIB1 WRKY70 ARCK1 AT5G52760 XBAT34 OPCL1"," "]
["AT3G50930","AT3G50930.1","cytochrome BC1 synthesis (BCS1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G50940.1); Has 21434 Blast hits to 19763 proteins in 2733 species: Archae - 1352; Bacteria - 7111; Metazoa - 3538; Fungi - 2773; Plants - 2474; Viruses - 30; Other Eukaryotes - 4156 (source: NCBI BLink).","protein_coding","CYTOCHROME BC1 SYNTHESIS (BCS1)","CYTOCHROME BC1 SYNTHESIS (BCS1)"," ","GO:1901617 organic hydroxy compound biosynthetic process ","P ","7.82e-06 ","8/26 (30.8%) ","578/30324 (1.9%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
["AT2G44840","AT2G44840.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13 (ERF13)"," (EREBP);ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13 (ATERF13);ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13 (ERF13)"," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","7.91e-06 ","7/26 (26.9%) ","367/30324 (1.2%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
["AT1G17380","AT1G17380.1","jasmonate-zim-domain protein 5 (JAZ5); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 6 (TAIR:AT1G72450.1); Has 301 Blast hits to 296 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","JASMONATE-ZIM-DOMAIN PROTEIN 5 (JAZ5)"," (tify11a);JASMONATE-ZIM-DOMAIN PROTEIN 5 (JAZ5)"," ","GO:0009814 defense response, incompatible interaction ","P ","7.93e-06 ","8/26 (30.8%) ","579/30324 (1.9%) ","SIB1 WRKY70 NAC036 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1"," "]
["AT2G17040","AT2G17040.1","Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis.","protein_coding","NAC DOMAIN CONTAINING PROTEIN 36 (NAC036)","NAC DOMAIN CONTAINING PROTEIN 36 (anac036);NAC DOMAIN CONTAINING PROTEIN 36 (NAC036)"," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","8.21e-06 ","7/26 (26.9%) ","369/30324 (1.2%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
["AT1G20510","AT1G20510.1","OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 85702 Blast hits to 78184 proteins in 3819 species: Archae - 1213; Bacteria - 55131; Metazoa - 3605; Fungi - 4761; Plants - 2762; Viruses - 1; Other Eukaryotes - 18229 (source: NCBI BLink).","protein_coding","OPC-8:0 COA LIGASE1 (OPCL1)","OPC-8:0 COA LIGASE1 (OPCL1)"," ","GO:0051707 response to other organism ","P ","8.41e-06 ","11/26 (42.3%) ","1535/30324 (5.1%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
["AT3G56710","AT3G56710.1","Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts.","protein_coding","SIGMA FACTOR BINDING PROTEIN 1 (SIB1)","SIGMA FACTOR BINDING PROTEIN 1 (SIB1)"," ","GO:0009607 response to biotic stimulus ","P ","8.46e-06 ","11/26 (42.3%) ","1536/30324 (5.1%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
["AT2G46400","AT2G46400.1","member of WRKY Transcription Factor; Group III","protein_coding","WRKY DNA-BINDING PROTEIN 46 (WRKY46)","WRKY DNA-BINDING PROTEIN 46 (WRKY46);WRKY DNA-BINDING PROTEIN 46 (ATWRKY46)"," ","GO:0032787 monocarboxylic acid metabolic process ","P ","9.11e-06 ","10/26 (38.5%) ","1176/30324 (3.9%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
["AT3G56400","AT3G56400.1","member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of  JA-signaling is partly executed by NPR1.","protein_coding","WRKY DNA-BINDING PROTEIN 70 (WRKY70)","WRKY DNA-BINDING PROTEIN 70 (WRKY70);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70 (ATWRKY70)"," ","GO:1901700 response to oxygen-containing compound ","P ","9.84e-06 ","13/26 (50.0%) ","2459/30324 (8.1%) ","JAZ5 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340 AT3G54150"," "]
["AT4G14365","AT4G14365.1","XB3 ortholog 4 in Arabidopsis thaliana (XBAT34); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 5 in Arabidopsis thaliana (TAIR:AT3G23280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","XB3 ORTHOLOG 4 IN ARABIDOPSIS THALIANA (XBAT34)","XB3 ORTHOLOG 4 IN ARABIDOPSIS THALIANA (XBAT34)"," ","GO:0000165 MAPK cascade ","P ","1.20e-05 ","6/26 (23.1%) ","222/30324 (0.7%) ","SIB1 WRKY70 NAC036 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0007243 intracellular protein kinase cascade ","P ","1.26e-05 ","6/26 (23.1%) ","224/30324 (0.7%) ","SIB1 WRKY70 NAC036 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0007165 signal transduction ","P ","1.45e-05 ","11/26 (42.3%) ","1618/30324 (5.3%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0044700 single organism signaling ","P ","2.59e-05 ","11/26 (42.3%) ","1713/30324 (5.6%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0023052 signaling ","P ","2.61e-05 ","11/26 (42.3%) ","1714/30324 (5.7%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:1901701 cellular response to oxygen-containing compound ","P ","2.62e-05 ","9/26 (34.6%) ","969/30324 (3.2%) ","JAZ5 SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0009627 systemic acquired resistance ","P ","3.69e-05 ","7/26 (26.9%) ","460/30324 (1.5%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1"," "]
[{"$nulls":6}," ","GO:0044283 small molecule biosynthetic process ","P ","4.30e-05 ","10/26 (38.5%) ","1387/30324 (4.6%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0031348 negative regulation of defense response ","P ","4.53e-05 ","6/26 (23.1%) ","278/30324 (0.9%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0010033 response to organic substance ","P ","4.71e-05 ","13/26 (50.0%) ","2805/30324 (9.3%) ","JAZ5 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0009751 response to salicylic acid stimulus ","P ","5.44e-05 ","7/26 (26.9%) ","487/30324 (1.6%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:1901615 organic hydroxy compound metabolic process ","P ","6.41e-05 ","8/26 (30.8%) ","760/30324 (2.5%) ","SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0009719 response to endogenous stimulus ","P ","6.65e-05 ","11/26 (42.3%) ","1879/30324 (6.2%) ","JAZ5 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT3G54150"," "]
[{"$nulls":6}," ","GO:0051704 multi-organism process ","P ","7.64e-05 ","11/26 (42.3%) ","1905/30324 (6.3%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1"," "]
[{"$nulls":6}," ","GO:0031347 regulation of defense response ","P ","1.22e-04 ","7/26 (26.9%) ","549/30324 (1.8%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0071407 cellular response to organic cyclic compound ","P ","1.25e-04 ","7/26 (26.9%) ","551/30324 (1.8%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0044711 single-organism biosynthetic process ","P ","1.52e-04 ","10/26 (38.5%) ","1589/30324 (5.2%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0080134 regulation of response to stress ","P ","1.69e-04 ","7/26 (26.9%) ","576/30324 (1.9%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0007154 cell communication ","P ","1.79e-04 ","11/26 (42.3%) ","2073/30324 (6.8%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0010310 regulation of hydrogen peroxide metabolic process ","P ","2.10e-04 ","5/26 (19.2%) ","188/30324 (0.6%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0071310 cellular response to organic substance ","P ","2.43e-04 ","9/26 (34.6%) ","1261/30324 (4.2%) ","JAZ5 SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0048585 negative regulation of response to stimulus ","P ","2.54e-04 ","6/26 (23.1%) ","373/30324 (1.2%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0050832 defense response to fungus ","P ","2.96e-04 ","6/26 (23.1%) ","383/30324 (1.3%) ","AT2G34930 SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:2000377 regulation of reactive oxygen species metabolic process ","P ","3.14e-04 ","5/26 (19.2%) ","204/30324 (0.7%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0006950 response to stress ","P ","4.25e-04 ","14/26 (53.8%) ","4028/30324 (13.3%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340 AT1G72920"," "]
[{"$nulls":6}," ","GO:0019752 carboxylic acid metabolic process ","P ","4.31e-04 ","10/26 (38.5%) ","1780/30324 (5.9%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0043436 oxoacid metabolic process ","P ","4.63e-04 ","10/26 (38.5%) ","1794/30324 (5.9%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0006082 organic acid metabolic process ","P ","4.65e-04 ","10/26 (38.5%) ","1795/30324 (5.9%) ","JAZ5 SIB1 WRKY70 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340"," "]
[{"$nulls":6}," ","GO:0045088 regulation of innate immune response ","P ","5.42e-04 ","6/26 (23.1%) ","425/30324 (1.4%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0050776 regulation of immune response ","P ","5.57e-04 ","6/26 (23.1%) ","427/30324 (1.4%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0002682 regulation of immune system process ","P ","5.80e-04 ","6/26 (23.1%) ","430/30324 (1.4%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0070887 cellular response to chemical stimulus ","P ","7.54e-04 ","9/26 (34.6%) ","1445/30324 (4.8%) ","JAZ5 SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0048583 regulation of response to stimulus ","P ","7.62e-04 ","7/26 (26.9%) ","722/30324 (2.4%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0009595 detection of biotic stimulus ","P ","8.11e-04 ","4/26 (15.4%) ","106/30324 (0.3%) ","WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","1.11e-03 ","5/26 (19.2%) ","264/30324 (0.9%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0009753 response to jasmonic acid stimulus ","P ","1.12e-03 ","6/26 (23.1%) ","482/30324 (1.6%) ","JAZ5 WRKY70 ERF13 AT5G52760 XBAT34 OPCL1"," "]
[{"$nulls":6}," ","GO:0042221 response to chemical stimulus ","P ","1.54e-03 ","13/26 (50.0%) ","3789/30324 (12.5%) ","JAZ5 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0009867 jasmonic acid mediated signaling pathway ","P ","1.82e-03 ","5/26 (19.2%) ","292/30324 (1.0%) ","JAZ5 WRKY70 ERF13 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0071395 cellular response to jasmonic acid stimulus ","P ","1.82e-03 ","5/26 (19.2%) ","292/30324 (1.0%) ","JAZ5 WRKY70 ERF13 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0014070 response to organic cyclic compound ","P ","2.41e-03 ","7/26 (26.9%) ","860/30324 (2.8%) ","SIB1 WRKY70 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340"," "]
[{"$nulls":6}," ","GO:0051606 detection of stimulus ","P ","3.14e-03 ","4/26 (15.4%) ","149/30324 (0.5%) ","WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0051716 cellular response to stimulus ","P ","3.59e-03 ","11/26 (42.3%) ","2811/30324 (9.3%) ","JAZ5 AT2G34930 SIB1 WRKY70 NAC036 ERF13 ARCK1 AT5G52760 XBAT34 AT1G13340 AT3G54150"," "]
[{"$nulls":6}," ","GO:0042743 hydrogen peroxide metabolic process ","P ","3.65e-03 ","5/26 (19.2%) ","337/30324 (1.1%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0043069 negative regulation of programmed cell death ","P ","5.16e-03 ","4/26 (15.4%) ","169/30324 (0.6%) ","WRKY70 ERF13 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0060548 negative regulation of cell death ","P ","5.66e-03 ","4/26 (15.4%) ","173/30324 (0.6%) ","WRKY70 ERF13 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0072593 reactive oxygen species metabolic process ","P ","5.72e-03 ","5/26 (19.2%) ","370/30324 (1.2%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0050896 response to stimulus ","P ","5.78e-03 ","16/26 (61.5%) ","6619/30324 (21.8%) ","JAZ5 AT2G34930 AT5G18470 SIB1 WRKY70 NAC036 ERF13 ARCK1 WRKY46 AT5G52760 XBAT34 OPCL1 BCS1 AT1G13340 AT3G54150 AT1G72920"," "]
[{"$nulls":6}," ","GO:0009581 detection of external stimulus ","P ","7.95e-03 ","3/26 (11.5%) ","61/30324 (0.2%) ","ARCK1 AT5G52760 XBAT34"," "]
[{"$nulls":6}," ","GO:0042742 defense response to bacterium ","P ","9.70e-03 ","5/26 (19.2%) ","413/30324 (1.4%) ","SIB1 WRKY70 ARCK1 AT5G52760 XBAT34"," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G76960","AT1G76960.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G58225","AT1G58225.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G38240","AT2G38240.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8819 Blast hits to 8740 proteins in 1012 species: Archae - 0; Bacteria - 1137; Metazoa - 112; Fungi - 1067; Plants - 5036; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","6.00e-10 ","16/32 (50.0%) ","1667/30324 (5.5%) ","PNP-A BGL2 PR1 CRK4 PDF1.2 TAT3 PDF1.3 AT3G13950 LURP1 CLH1 AT5G10760 PDF1.2c RLP38 ANK VSP1 PDF1.2b"," "]
["AT3G44870","AT3G44870.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: farnesoic acid carboxyl-O-methyltransferase (TAIR:AT3G44860.1); Has 896 Blast hits to 886 proteins in 115 species: Archae - 0; Bacteria - 49; Metazoa - 9; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009814 defense response, incompatible interaction ","P ","9.39e-08 ","10/32 (31.2%) ","579/30324 (1.9%) ","PNP-A BGL2 PR1 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT5G42530","AT5G42530.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009627 systemic acquired resistance ","P ","2.88e-07 ","9/32 (28.1%) ","460/30324 (1.5%) ","PNP-A BGL2 PR1 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT5G55460","AT5G55460.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G55410.2); Has 123 Blast hits to 123 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009753 response to jasmonic acid stimulus ","P ","4.34e-07 ","9/32 (28.1%) ","482/30324 (1.6%) ","BGL2 PR1 AT5G05600 PDF1.2 TAT3 LURP1 CLH1 ANK VSP1"," "]
["AT5G10760","AT5G10760.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","4.60e-07 ","19/32 (59.4%) ","4028/30324 (13.3%) ","PNP-A BGL2 PR1 AT5G05600 CRK4 PDF1.2 DIN11 TAT3 PDF1.3 AT3G13950 LURP1 CLH1 AT5G10760 PDF1.2c MSRB7 RLP38 ANK VSP1 PDF1.2b"," "]
["AT3G13950","AT3G13950.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051707 response to other organism ","P ","6.83e-07 ","13/32 (40.6%) ","1535/30324 (5.1%) ","PNP-A BGL2 PR1 AT5G05600 CRK4 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 PCC1 AT5G10760 ANK"," "]
["AT5G05600","AT5G05600.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009607 response to biotic stimulus ","P ","6.88e-07 ","13/32 (40.6%) ","1536/30324 (5.1%) ","PNP-A BGL2 PR1 AT5G05600 CRK4 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 PCC1 AT5G10760 ANK"," "]
["AT3G57260","AT3G57260.1","beta 1,3-glucanase","protein_coding","BETA-1,3-GLUCANASE 2 (BGL2)","BETA-1,3-GLUCANASE 2 (BGL2);PATHOGENESIS-RELATED PROTEIN 2 (PR2); (AtPR2);PATHOGENESIS-RELATED PROTEIN 2 (PR-2);BETA-1,3-GLUCANASE 2 (BG2)"," ","GO:0000165 MAPK cascade ","P ","1.05e-06 ","7/32 (21.9%) ","222/30324 (0.7%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT5G54610","AT5G54610.1","Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.","protein_coding","ANKYRIN (ANK)","BIAN DA 2 (BECOMING BIG IN CHINESE) (BDA1);ANKYRIN (ANK)"," ","GO:0007243 intracellular protein kinase cascade ","P ","1.12e-06 ","7/32 (21.9%) ","224/30324 (0.7%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT1G19670","AT1G19670.1","Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast.  Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation.","protein_coding","CHLOROPHYLLASE 1 (CLH1)","CHLOROPHYLLASE 1 (ATCLH1);CORONATINE-INDUCED PROTEIN 1 (CORI1);CHLOROPHYLLASE 1 (CLH1);CORONATINE-INDUCED PROTEIN 1 (ATHCOR1)"," ","GO:0009620 response to fungus ","P ","1.60e-06 ","9/32 (28.1%) ","560/30324 (1.8%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 PCC1 ANK"," "]
["AT3G45860","AT3G45860.1","Encodes a cysteine-rich receptor-like protein kinase.  Involved in programmed cell death and defense response to pathogen.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 4 (CRK4)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 4 (CRK4)"," ","GO:0050896 response to stimulus ","P ","6.25e-06 ","22/32 (68.8%) ","6619/30324 (21.8%) ","PNP-A GSTU4 BGL2 AT2G38240 PR1 AT5G05600 CRK4 PDF1.2 DIN11 TAT3 PDF1.3 AT3G13950 LURP1 CLH1 PCC1 AT5G10760 PDF1.2c MSRB7 RLP38 ANK VSP1 PDF1.2b"," "]
["AT4G23140","AT4G23140.2","Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 6 (CRK6)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 6 (CRK6)"," ","GO:0009867 jasmonic acid mediated signaling pathway ","P ","6.97e-06 ","7/32 (21.9%) ","292/30324 (1.0%) ","BGL2 PR1 AT5G05600 TAT3 LURP1 CLH1 ANK"," "]
["AT3G49620","AT3G49620.1","encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","protein_coding","DARK INDUCIBLE 11 (DIN11)","DARK INDUCIBLE 11 (DIN11)"," ","GO:0071395 cellular response to jasmonic acid stimulus ","P ","6.97e-06 ","7/32 (21.9%) ","292/30324 (1.0%) ","BGL2 PR1 AT5G05600 TAT3 LURP1 CLH1 ANK"," "]
["AT4G01630","AT4G01630.1","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","protein_coding","EXPANSIN A17 (EXPA17)","EXPANSIN 17 (ATEXP17);EXPANSIN A17 (ATEXPA17);EXPANSIN A17 (EXPA17); (ATHEXP ALPHA 1.13)"," ","GO:0045087 innate immune response ","P ","7.41e-06 ","10/32 (31.2%) ","914/30324 (3.0%) ","PNP-A BGL2 PR1 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT2G29460","AT2G29460.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 4 (GSTU4)","GLUTATHIONE S-TRANSFERASE TAU 4 (ATGSTU4);GLUTATHIONE S-TRANSFERASE 22 (GST22);GLUTATHIONE S-TRANSFERASE TAU 4 (GSTU4)"," ","GO:0006955 immune response ","P ","7.88e-06 ","10/32 (31.2%) ","920/30324 (3.0%) ","PNP-A BGL2 PR1 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT3G55970","AT3G55970.1","jasmonate-regulated gene 21 (JRG21); FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8809 Blast hits to 8750 proteins in 1005 species: Archae - 0; Bacteria - 1115; Metazoa - 109; Fungi - 1073; Plants - 4993; Viruses - 0; Other Eukaryotes - 1519 (source: NCBI BLink).","protein_coding","JASMONATE-REGULATED GENE 21 (JRG21)","JASMONATE-REGULATED GENE 21 (JRG21); (ATJRG21)"," ","GO:0051704 multi-organism process ","P ","9.11e-06 ","13/32 (40.6%) ","1905/30324 (6.3%) ","PNP-A BGL2 PR1 AT5G05600 CRK4 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 PCC1 AT5G10760 ANK"," "]
["AT2G14560","AT2G14560.1","Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica.  LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5.","protein_coding","LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA (LURP1)","LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA (LURP1)"," ","GO:0010033 response to organic substance ","P ","1.31e-05 ","15/32 (46.9%) ","2805/30324 (9.3%) ","GSTU4 BGL2 AT2G38240 PR1 AT5G05600 CRK4 PDF1.2 DIN11 TAT3 AT3G13950 LURP1 CLH1 ANK VSP1 PDF1.2b"," "]
["AT4G21830","AT4G21830.1","methionine sulfoxide reductase B7 (MSRB7); CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B8 (TAIR:AT4G21840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","METHIONINE SULFOXIDE REDUCTASE B7 (MSRB7)","METHIONINE SULFOXIDE REDUCTASE B7 (MSRB7);METHIONINE SULFOXIDE REDUCTASE B7 (ATMSRB7)"," ","GO:0010310 regulation of hydrogen peroxide metabolic process ","P ","1.48e-05 ","6/32 (18.8%) ","188/30324 (0.6%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
["AT4G21840","AT4G21840.1","methionine sulfoxide reductase B8 (MSRB8); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B7 (TAIR:AT4G21830.2); Has 8391 Blast hits to 8388 proteins in 2248 species: Archae - 76; Bacteria - 4942; Metazoa - 266; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2763 (source: NCBI BLink).","protein_coding","METHIONINE SULFOXIDE REDUCTASE B8 (MSRB8)","METHIONINE SULFOXIDE REDUCTASE B8 (ATMSRB8);METHIONINE SULFOXIDE REDUCTASE B8 (MSRB8)"," ","GO:0002376 immune system process ","P ","2.32e-05 ","10/32 (31.2%) ","1032/30324 (3.4%) ","PNP-A BGL2 PR1 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT3G22231","AT3G22231.1","Encodes a member of a novel 6 member Arabidopsis gene family.  Expression of PCC1 is regulated by the circadian clock and is upregulated in response to both virulent and avirulent strains of Pseudomonas syringae pv. tomato.","protein_coding","PATHOGEN AND CIRCADIAN CONTROLLED 1 (PCC1)","PATHOGEN AND CIRCADIAN CONTROLLED 1 (PCC1)"," ","GO:2000377 regulation of reactive oxygen species metabolic process ","P ","2.40e-05 ","6/32 (18.8%) ","204/30324 (0.7%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
["AT2G14610","AT2G14610.1","PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response.  Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence  actually corresponds to PR1.  Expression of this gene is salicylic-acid responsive.","protein_coding","PATHOGENESIS-RELATED GENE 1 (PR1)","PATHOGENESIS-RELATED GENE 1 (PR1);PATHOGENESIS-RELATED GENE 1 (ATPR1);PATHOGENESIS-RELATED GENE 1 (PR 1)"," ","GO:0009697 salicylic acid biosynthetic process ","P ","2.85e-05 ","6/32 (18.8%) ","210/30324 (0.7%) ","BGL2 PR1 TAT3 AT3G13950 LURP1 ANK"," "]
["AT1G14880","AT1G14880.1","PLANT CADMIUM RESISTANCE 1 (PCR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLANT CADMIUM RESISTANCE 2 (TAIR:AT1G14870.1); Has 778 Blast hits to 777 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 110; Plants - 511; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).","protein_coding","PLANT CADMIUM RESISTANCE 1 (PCR1)"," (AtPCR1);PLANT CADMIUM RESISTANCE 1 (PCR1)"," ","GO:0009696 salicylic acid metabolic process ","P ","4.07e-05 ","6/32 (18.8%) ","223/30324 (0.7%) ","BGL2 PR1 TAT3 AT3G13950 LURP1 ANK"," "]
["AT5G44420","AT5G44420.1","Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding","PLANT DEFENSIN 1.2 (PDF1.2)","PLANT DEFENSIN 1.2 (PDF1.2);LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77 (LCR77);PLANT DEFENSIN 1.2A (PDF1.2A)"," ","GO:0035556 intracellular signal transduction ","P ","5.95e-05 ","7/32 (21.9%) ","400/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
["AT2G26020","AT2G26020.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding","PLANT DEFENSIN 1.2B (PDF1.2b)","PLANT DEFENSIN 1.2B (PDF1.2b)"," ","GO:0009617 response to bacterium ","P ","6.27e-05 ","8/32 (25.0%) ","610/30324 (2.0%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 PCC1 ANK"," "]
["AT5G44430","AT5G44430.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding","PLANT DEFENSIN 1.2C (PDF1.2c)","PLANT DEFENSIN 1.2C (PDF1.2c)"," ","GO:0014070 response to organic cyclic compound ","P ","6.33e-05 ","9/32 (28.1%) ","860/30324 (2.8%) ","GSTU4 BGL2 AT2G38240 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
["AT2G26010","AT2G26010.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding","PLANT DEFENSIN 1.3 (PDF1.3)","PLANT DEFENSIN 1.3 (PDF1.3)"," ","GO:0042742 defense response to bacterium ","P ","7.38e-05 ","7/32 (21.9%) ","413/30324 (1.4%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
["AT2G18660","AT2G18660.1","Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space.  Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression.","protein_coding","PLANT NATRIURETIC PEPTIDE A (PNP-A)","EXPANSIN-LIKE B3 PRECURSOR (EXLB3);PLANT NATRIURETIC PEPTIDE A (PNP-A); (AtPNP-A)"," ","GO:0042537 benzene-containing compound metabolic process ","P ","1.00e-04 ","6/32 (18.8%) ","260/30324 (0.9%) ","BGL2 PR1 TAT3 AT3G13950 LURP1 ANK"," "]
["AT3G23120","AT3G23120.1","receptor like protein 38 (RLP38); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 37 (TAIR:AT3G23110.1); Has 120242 Blast hits to 33265 proteins in 1172 species: Archae - 42; Bacteria - 8485; Metazoa - 29672; Fungi - 1389; Plants - 71311; Viruses - 22; Other Eukaryotes - 9321 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 38 (RLP38)","RECEPTOR LIKE PROTEIN 38 (RLP38);RECEPTOR LIKE PROTEIN 38 (AtRLP38)"," ","GO:0042221 response to chemical stimulus ","P ","1.01e-04 ","16/32 (50.0%) ","3789/30324 (12.5%) ","GSTU4 BGL2 AT2G38240 PR1 AT5G05600 CRK4 PDF1.2 DIN11 TAT3 AT3G13950 LURP1 CLH1 MSRB7 ANK VSP1 PDF1.2b"," "]
["AT2G24850","AT2G24850.1","Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.","protein_coding","TYROSINE AMINOTRANSFERASE 3 (TAT3)","TYROSINE AMINOTRANSFERASE 3 (TAT3);TYROSINE AMINOTRANSFERASE (TAT)"," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","1.10e-04 ","6/32 (18.8%) ","264/30324 (0.9%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
["AT5G24780","AT5G24780.1","encodes an acid phosphatase similar to soybean vegetative storage proteins. Gene expression is induced by wounding and jasmonic acid.","protein_coding","VEGETATIVE STORAGE PROTEIN 1 (VSP1)","VEGETATIVE STORAGE PROTEIN 1 (VSP1); (ATVSP1)"," ","GO:0031348 negative regulation of defense response ","P ","1.49e-04 ","6/32 (18.8%) ","278/30324 (0.9%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0012501 programmed cell death ","P ","1.52e-04 ","7/32 (21.9%) ","460/30324 (1.5%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0007165 signal transduction ","P ","1.56e-04 ","11/32 (34.4%) ","1618/30324 (5.3%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 RLP38 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0009725 response to hormone stimulus ","P ","2.04e-04 ","11/32 (34.4%) ","1662/30324 (5.5%) ","BGL2 PR1 AT5G05600 PDF1.2 DIN11 TAT3 LURP1 CLH1 ANK VSP1 PDF1.2b"," "]
[{"$nulls":6}," ","GO:0009751 response to salicylic acid stimulus ","P ","2.23e-04 ","7/32 (21.9%) ","487/30324 (1.6%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0007154 cell communication ","P ","2.23e-04 ","12/32 (37.5%) ","2073/30324 (6.8%) ","BGL2 PR1 AT5G05600 DIN11 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 RLP38 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0044700 single organism signaling ","P ","2.76e-04 ","11/32 (34.4%) ","1713/30324 (5.6%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 RLP38 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0023052 signaling ","P ","2.77e-04 ","11/32 (34.4%) ","1714/30324 (5.7%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 RLP38 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0016265 death ","P ","2.96e-04 ","7/32 (21.9%) ","508/30324 (1.7%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0008219 cell death ","P ","2.96e-04 ","7/32 (21.9%) ","508/30324 (1.7%) ","BGL2 PR1 CRK4 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0042743 hydrogen peroxide metabolic process ","P ","4.56e-04 ","6/32 (18.8%) ","337/30324 (1.1%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0009755 hormone-mediated signaling pathway ","P ","4.62e-04 ","8/32 (25.0%) ","795/30324 (2.6%) ","BGL2 PR1 AT5G05600 TAT3 LURP1 CLH1 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0032870 cellular response to hormone stimulus ","P ","6.60e-04 ","8/32 (25.0%) ","834/30324 (2.8%) ","BGL2 PR1 AT5G05600 TAT3 LURP1 CLH1 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0009719 response to endogenous stimulus ","P ","6.85e-04 ","11/32 (34.4%) ","1879/30324 (6.2%) ","BGL2 PR1 AT5G05600 PDF1.2 DIN11 TAT3 LURP1 CLH1 ANK VSP1 PDF1.2b"," "]
[{"$nulls":6}," ","GO:0071495 cellular response to endogenous stimulus ","P ","6.90e-04 ","8/32 (25.0%) ","839/30324 (2.8%) ","BGL2 PR1 AT5G05600 TAT3 LURP1 CLH1 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","7.15e-04 ","7/32 (21.9%) ","580/30324 (1.9%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 ANK"," "]
[{"$nulls":6}," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","7.46e-04 ","6/32 (18.8%) ","367/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","7.70e-04 ","6/32 (18.8%) ","369/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0072593 reactive oxygen species metabolic process ","P ","7.82e-04 ","6/32 (18.8%) ","370/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","8.19e-04 ","6/32 (18.8%) ","373/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0048585 negative regulation of response to stimulus ","P ","8.19e-04 ","6/32 (18.8%) ","373/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0051716 cellular response to stimulus ","P ","8.26e-04 ","13/32 (40.6%) ","2811/30324 (9.3%) ","PNP-A BGL2 PR1 AT5G05600 DIN11 TAT3 AT3G13950 LURP1 CLH1 AT5G10760 RLP38 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0006612 protein targeting to membrane ","P ","8.71e-04 ","6/32 (18.8%) ","377/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0090150 establishment of protein localization to membrane ","P ","8.98e-04 ","6/32 (18.8%) ","379/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0072657 protein localization to membrane ","P ","8.98e-04 ","6/32 (18.8%) ","379/30324 (1.2%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0050832 defense response to fungus ","P ","9.54e-04 ","6/32 (18.8%) ","383/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0080135 regulation of cellular response to stress ","P ","1.01e-03 ","6/32 (18.8%) ","387/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0043067 regulation of programmed cell death ","P ","1.21e-03 ","6/32 (18.8%) ","399/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0009626 plant-type hypersensitive response ","P ","1.33e-03 ","6/32 (18.8%) ","406/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0010941 regulation of cell death ","P ","1.35e-03 ","6/32 (18.8%) ","407/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0034050 host programmed cell death induced by symbiont ","P ","1.35e-03 ","6/32 (18.8%) ","407/30324 (1.3%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:1901700 response to oxygen-containing compound ","P ","1.36e-03 ","12/32 (37.5%) ","2459/30324 (8.1%) ","BGL2 PR1 AT5G05600 CRK4 PDF1.2 TAT3 AT3G13950 LURP1 CLH1 MSRB7 ANK VSP1"," "]
[{"$nulls":6}," ","GO:0071310 cellular response to organic substance ","P ","1.52e-03 ","9/32 (28.1%) ","1261/30324 (4.2%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0045088 regulation of innate immune response ","P ","1.73e-03 ","6/32 (18.8%) ","425/30324 (1.4%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0050776 regulation of immune response ","P ","1.78e-03 ","6/32 (18.8%) ","427/30324 (1.4%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0002682 regulation of immune system process ","P ","1.85e-03 ","6/32 (18.8%) ","430/30324 (1.4%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:1901701 cellular response to oxygen-containing compound ","P ","2.00e-03 ","8/32 (25.0%) ","969/30324 (3.2%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0070887 cellular response to chemical stimulus ","P ","4.56e-03 ","9/32 (28.1%) ","1445/30324 (4.8%) ","BGL2 PR1 AT5G05600 TAT3 AT3G13950 LURP1 CLH1 ANK PDF1.2b"," "]
[{"$nulls":6}," ","GO:0033554 cellular response to stress ","P ","5.34e-03 ","9/32 (28.1%) ","1474/30324 (4.9%) ","PNP-A BGL2 PR1 DIN11 AT3G13950 LURP1 CLH1 AT5G10760 ANK"," "]
[{"$nulls":6}," ","GO:0031347 regulation of defense response ","P ","7.41e-03 ","6/32 (18.8%) ","549/30324 (1.8%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0071407 cellular response to organic cyclic compound ","P ","7.56e-03 ","6/32 (18.8%) ","551/30324 (1.8%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0080134 regulation of response to stress ","P ","9.70e-03 ","6/32 (18.8%) ","576/30324 (1.9%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0044802 single-organism membrane organization ","P ","9.79e-03 ","6/32 (18.8%) ","577/30324 (1.9%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:0061024 membrane organization ","P ","9.79e-03 ","6/32 (18.8%) ","577/30324 (1.9%) ","BGL2 PR1 AT3G13950 LURP1 CLH1 ANK"," "]
[{"$nulls":6}," ","GO:1901617 organic hydroxy compound biosynthetic process ","P ","9.89e-03 ","6/32 (18.8%) ","578/30324 (1.9%) ","BGL2 PR1 TAT3 AT3G13950 LURP1 ANK"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," "," ",{"$nulls":5}," "]
[{"$nulls":6}," ","Cellular Component",{"$nulls":5}," "]
[{"$nulls":6}," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
[{"$nulls":6}," ","GO:0005618 cell wall ","C ","7.56e-04 ","7/32 (21.9%) ","585/30324 (1.9%) ","PNP-A BGL2 PR1 PDF1.2 PDF1.3 PDF1.2c PDF1.2b"," "]
[{"$nulls":6}," ","GO:0030312 external encapsulating structure ","C ","7.65e-04 ","7/32 (21.9%) ","586/30324 (1.9%) ","PNP-A BGL2 PR1 PDF1.2 PDF1.3 PDF1.2c PDF1.2b"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ","  ",{"$nulls":5}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
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{"sheet":"7","index":7,"n_rows":164,"n_cols":11,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",null," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","No GO Term Enrichment",null,null,"ATTED2 Co-expression network"]
["AT2G43670","AT2G43670.1","Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G78520.1); Has 1380 Blast hits to 1333 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 1373; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G59930","AT3G59930.1","Encodes a defensin-like (DEFL) family protein.","protein_coding",null,null," "]
["AT3G28540","AT3G28540.1","P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28510.1); Has 19094 Blast hits to 18394 proteins in 2794 species: Archae - 1114; Bacteria - 6721; Metazoa - 2744; Fungi - 2271; Plants - 2238; Viruses - 33; Other Eukaryotes - 3973 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G25930","AT3G25930.1","Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G68300.1); Has 150 Blast hits to 150 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G49310","AT1G49310.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G17215","AT4G17215.1","Pollen Ole e 1 allergen and extensin family protein; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G47635.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G38080","AT4G38080.1","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root; EXPRESSED DURING: C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G22510.1); Has 4732 Blast hits to 2740 proteins in 428 species: Archae - 22; Bacteria - 604; Metazoa - 1100; Fungi - 265; Plants - 1375; Viruses - 486; Other Eukaryotes - 880 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G12420","AT5G12420.1","O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G16350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G43530","AT2G43530.1","Encodes a defensin-like (DEFL) family protein.","protein_coding",null,null," "]
["AT5G45460","AT5G45460.1","unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G05650","AT1G05650.1","Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G05660.1); Has 4025 Blast hits to 4009 proteins in 482 species: Archae - 4; Bacteria - 1133; Metazoa - 14; Fungi - 1282; Plants - 1474; Viruses - 2; Other Eukaryotes - 116 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G43910","AT5G43910.2","pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G28706.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G70700","AT1G70700.1","JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","protein_coding"," (TIFY7)"," (TIFY7);JASMONATE-ZIM-DOMAIN PROTEIN 9 (JAZ9)"," "]
["AT4G13310","AT4G13310.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 20 (CYP71A20)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 20 (CYP71A20)"," "]
["AT2G48140","AT2G48140.1","embryo sac development arrest 4 (EDA4); CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G05450.2); Has 541 Blast hits to 526 proteins in 56 species: Archae - 0; Bacteria - 35; Metazoa - 27; Fungi - 2; Plants - 459; Viruses - 2; Other Eukaryotes - 16 (source: NCBI BLink).","protein_coding","EMBRYO SAC DEVELOPMENT ARREST 4 (EDA4)","EMBRYO SAC DEVELOPMENT ARREST 4 (EDA4)"," "]
["AT3G22740","AT3G22740.1","homocysteine S-methyltransferase (HMT3)","protein_coding","HOMOCYSTEINE S-METHYLTRANSFERASE 3 (HMT3)","HOMOCYSTEINE S-METHYLTRANSFERASE 3 (HMT3)"," "]
["AT4G15440","AT4G15440.1","Encodes a hydroperoxide lyase.  Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first  exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.","protein_coding","HYDROPEROXIDE LYASE 1 (HPL1)","HYDROPEROXIDE LYASE 1 (HPL1); (CYP74B2)"," "]
["AT5G06870","AT5G06870.1","Encodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate.","protein_coding","POLYGALACTURONASE INHIBITING PROTEIN 2 (PGIP2)","POLYGALACTURONASE INHIBITING PROTEIN 2 (PGIP2);ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2 (ATPGIP2)"," "]
["AT5G09530","AT5G09530.1","The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development.","protein_coding","PRO-GLU-LEU|ILE|VAL-PRO-LYS 1 (PELPK1)","PROLINE-RICH PROTEIN 10 (PRP10);PRO-GLU-LEU|ILE|VAL-PRO-LYS 1 (PELPK1)"," "]
["AT5G09520","AT5G09520.1","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09530.1); Has 4837 Blast hits to 2182 proteins in 495 species: Archae - 22; Bacteria - 2025; Metazoa - 1314; Fungi - 166; Plants - 730; Viruses - 63; Other Eukaryotes - 517 (source: NCBI BLink).","protein_coding","PRO-GLU-LEU|ILE|VAL-PRO-LYS 2 (PELPK2)","PRO-GLU-LEU|ILE|VAL-PRO-LYS 2 (PELPK2)"," "]
["AT4G13810","AT4G13810.1","receptor like protein 47 (RLP47); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 50 (TAIR:AT4G13920.1); Has 94456 Blast hits to 27387 proteins in 1128 species: Archae - 39; Bacteria - 7351; Metazoa - 18966; Fungi - 1097; Plants - 59830; Viruses - 28; Other Eukaryotes - 7145 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 47 (RLP47)","RECEPTOR LIKE PROTEIN 47 (RLP47);RECEPTOR LIKE PROTEIN 47 (AtRLP47)"," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G56370","AT3G56370.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G09620","AT1G09620.1","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT3G59020","AT3G59020.2","ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G31660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0065008 regulation of biological quality ","P ","4.26e-05 ","13/55 (23.6%) ","1058/30324 (3.5%) ","ACO3 BRI1 CEV1 YDA ECA3 AT3G56370 MRL1 SLOMO AT2G01820 AT4G01290 AT2G36480 GLR3.4 UBA 2"," "]
["AT2G01440","AT2G01440.1","DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0005975 carbohydrate metabolic process ","P ","5.54e-04 ","14/55 (25.5%) ","1560/30324 (5.1%) ","ACO2 ACO3 ATPA PHS1 BRI1 CEV1 KUP5 AT4G27640 AT3G56370 AT2G15900 AT2G46520 Tudor2 AT1G04140 AT4G19110"," "]
["AT3G42628","AT3G42628.1","phosphoenolpyruvate carboxylase-related / PEP carboxylase-related; LOCATED IN: cytosol; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 2 (TAIR:AT2G42600.1); Has 248 Blast hits to 248 proteins in 69 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 247; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009059 macromolecule biosynthetic process ","P ","7.31e-04 ","23/55 (41.8%) ","4356/30324 (14.4%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 BRI1 CEV1 POLGAMMA2 PC-MYB1 AT1G09620 AT2G15900 POLGAMMA1 TPL MRL1 PSBD PSBC EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["AT2G01820","AT2G01820.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044260 cellular macromolecule metabolic process ","P ","7.66e-04 ","29/55 (52.7%) ","6717/30324 (22.2%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 CEV1 POLGAMMA2 PC-MYB1 DME AT1G09620 AT1G72180 AT4G27640 AT3G56370 AT2G15900 POLGAMMA1 TPL MRL1 SLOMO PSBD AT2G46520 UBP5 PSBC EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["AT3G23750","AT3G23750.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 176104 Blast hits to 138784 proteins in 5021 species: Archae - 174; Bacteria - 16889; Metazoa - 56819; Fungi - 11325; Plants - 68733; Viruses - 454; Other Eukaryotes - 21710 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043170 macromolecule metabolic process ","P ","9.24e-04 ","30/55 (54.5%) ","7205/30324 (23.8%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 BRI1 CEV1 POLGAMMA2 PC-MYB1 DME AT1G09620 AT1G72180 AT4G27640 AT3G56370 AT2G15900 POLGAMMA1 TPL MRL1 SLOMO PSBD AT2G46520 UBP5 PSBC EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["AT1G72180","AT1G72180.1","Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 222922 Blast hits to 143384 proteins in 4612 species: Archae - 143; Bacteria - 22250; Metazoa - 69718; Fungi - 11673; Plants - 90830; Viruses - 408; Other Eukaryotes - 27900 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006487 protein N-linked glycosylation ","P ","1.06e-03 ","5/55 (9.1%) ","98/30324 (0.3%) ","ACO2 ACO3 AT2G15900 AT1G04140 AT4G19110"," "]
["AT3G55410","AT3G55410.1","2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009987 cellular process ","P ","1.09e-03 ","40/55 (72.7%) ","12187/30324 (40.2%) ","ACO2 ACO3 SPL14 ATPA YCF10 AT5G58100 PHS1 BRI1 CEV1 POLGAMMA2 PC-MYB1 YDA DME KUP5 ECA3 AT1G09620 AT1G72180 AT4G27640 AT3G56370 AT3G59020 AT2G15900 POLGAMMA1 TPL MRL1 SLOMO PSBD AT2G46520 UBP5 AT4G01290 PSBC Tudor2 GLDP2 EICBP.B AT2G36480 AT1G04140 SPT16 ATPF GLR3.4 UBA 2 AT4G19110"," "]
["AT5G65440","AT5G65440.3","unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1).","protein_coding",null,null," ","GO:0000059 protein import into nucleus, docking ","P ","1.33e-03 ","3/55 (5.5%) ","12/30324 (0.0%) ","AT4G27640 AT3G59020 AT2G46520"," "]
["AT4G27640","AT4G27640.1","ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034645 cellular macromolecule biosynthetic process ","P ","2.13e-03 ","22/55 (40.0%) ","4260/30324 (14.0%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 CEV1 POLGAMMA2 PC-MYB1 AT1G09620 AT2G15900 POLGAMMA1 TPL MRL1 PSBD PSBC EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["AT1G53780","AT1G53780.2","peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein folding, protein catabolic process; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A 1A (TAIR:AT1G53750.1).","protein_coding",null,null," ","GO:0009057 macromolecule catabolic process ","P ","3.00e-03 ","9/55 (16.4%) ","662/30324 (2.2%) ","ACO2 ACO3 AT4G27640 AT3G56370 AT2G15900 SLOMO AT2G46520 UBP5 UBA 2"," "]
["AT2G07739","AT2G07739.1","Ycf1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATMG00370.1); Has 1145 Blast hits to 1145 proteins in 726 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044238 primary metabolic process ","P ","3.28e-03 ","33/55 (60.0%) ","9013/30324 (29.7%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 BRI1 CEV1 POLGAMMA2 PC-MYB1 DME KUP5 AT1G09620 AT1G72180 AT4G27640 AT3G56370 AT2G15900 POLGAMMA1 TPL MRL1 SLOMO PSBD AT2G46520 UBP5 PSBC Tudor2 GLDP2 EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["AT4G34810","AT4G34810.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT4G34790.1); Has 1331 Blast hits to 1316 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1330; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006264 mitochondrial DNA replication ","P ","3.50e-03 ","2/55 (3.6%) ","2/30324 (0.0%) ","POLGAMMA2 POLGAMMA1"," "]
["AT2G36480","AT2G36480.3","ENTH/VHS family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: PCF11P-similar protein 4 (TAIR:AT4G04885.1); Has 1695 Blast hits to 821 proteins in 229 species: Archae - 0; Bacteria - 223; Metazoa - 395; Fungi - 309; Plants - 134; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033259 plastid DNA replication ","P ","3.50e-03 ","2/55 (3.6%) ","2/30324 (0.0%) ","POLGAMMA2 POLGAMMA1"," "]
["AT1G09980","AT1G09980.1","Putative serine esterase  family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase  family protein (TAIR:AT1G58350.2); Has 480 Blast hits to 383 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 283; Fungi - 2; Plants - 87; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033258 plastid DNA metabolic process ","P ","3.50e-03 ","2/55 (3.6%) ","2/30324 (0.0%) ","POLGAMMA2 POLGAMMA1"," "]
["AT1G22610","AT1G22610.1","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006354 DNA-dependent transcription, elongation ","P ","3.65e-03 ","5/55 (9.1%) ","126/30324 (0.4%) ","ATPA YCF10 PSBD PSBC ATPF"," "]
["AT1G04140","AT1G04140.2","Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G43930.3); Has 24502 Blast hits to 11850 proteins in 489 species: Archae - 64; Bacteria - 6127; Metazoa - 7778; Fungi - 5629; Plants - 2081; Viruses - 0; Other Eukaryotes - 2823 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044723 single-organism carbohydrate metabolic process ","P ","4.75e-03 ","12/55 (21.8%) ","1353/30324 (4.5%) ","ACO2 ACO3 PHS1 BRI1 CEV1 KUP5 AT4G27640 AT2G15900 AT2G46520 Tudor2 AT1G04140 AT4G19110"," "]
["AT2G46520","AT2G46520.1","cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901575 organic substance catabolic process ","P ","4.96e-03 ","13/55 (23.6%) ","1611/30324 (5.3%) ","ACO2 ACO3 CEV1 KUP5 AT4G27640 AT3G56370 AT2G15900 SLOMO AT2G46520 UBP5 Tudor2 GLDP2 UBA 2"," "]
["AT2G15900","AT2G15900.1","Phox-associated domain;Phox-like;Sorting nexin, C-terminal; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PX-associated, sorting nexin 13 (InterPro:IPR013996), Sorting nexin, C-terminal (InterPro:IPR013937), Phox-like (InterPro:IPR001683), Phox-associated domain (InterPro:IPR003114); BEST Arabidopsis thaliana protein match is: Phox-associated domain;Phox-like;Sorting nexin, C-terminal (TAIR:AT1G15240.2); Has 1078 Blast hits to 871 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 658; Fungi - 203; Plants - 141; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042592 homeostatic process ","P ","5.43e-03 ","7/55 (12.7%) ","374/30324 (1.2%) ","ACO3 BRI1 ECA3 SLOMO AT2G36480 GLR3.4 UBA 2"," "]
["AT4G01290","AT4G01290.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1744 Blast hits to 1308 proteins in 219 species: Archae - 0; Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043623 cellular protein complex assembly ","P ","5.75e-03 ","8/55 (14.5%) ","536/30324 (1.8%) ","ACO3 YDA AT4G27640 AT3G59020 PSBD AT2G46520 AT4G01290 PSBC"," "]
["AT4G19110","AT4G19110.2","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.1); Has 126565 Blast hits to 124971 proteins in 4434 species: Archae - 127; Bacteria - 14032; Metazoa - 47999; Fungi - 13023; Plants - 29702; Viruses - 527; Other Eukaryotes - 21155 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034622 cellular macromolecular complex assembly ","P ","8.67e-03 ","8/55 (14.5%) ","567/30324 (1.9%) ","ACO3 YDA AT4G27640 AT3G59020 PSBD AT2G46520 AT4G01290 PSBC"," "]
["AT5G58100","AT5G58100.1","unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901576 organic substance biosynthetic process ","P ","9.13e-03 ","27/55 (49.1%) ","6662/30324 (22.0%) ","ACO2 ACO3 SPL14 ATPA YCF10 PHS1 BRI1 CEV1 POLGAMMA2 PC-MYB1 KUP5 AT1G09620 AT4G27640 AT2G15900 POLGAMMA1 TPL MRL1 PSBD AT2G46520 PSBC Tudor2 EICBP.B AT2G36480 AT1G04140 ATPF UBA 2 AT4G19110"," "]
["ATCG00130","ATCG00130.1","ATPase F subunit.","protein_coding"," (ATPF)"," (ATPF)"," ",{"$nulls":6}," "]
["AT4G32730","AT4G32730.2","Encodes a putative c-myb-like transcription factor with three MYB repeats.","protein_coding"," (PC-MYB1)"," (PC-MYB1);MYB DOMAIN PROTEIN 3R1 (MYB3R-1);C-MYB-LIKE TRANSCRIPTION FACTOR 3R-1 (MYB3R1);A. THALIANA MYB DOMAIN PROTEIN 3R1 (ATMYB3R1); (ATMYB3R-1)"," "," ",{"$nulls":5}," "]
["ATCG00530","ATCG00530.1","hypothetical protein","protein_coding"," (YCF10)"," (YCF10)"," ","Cellular Component",{"$nulls":5}," "]
["AT4G26970","AT4G26970.1","Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro.","protein_coding","ACONITASE 2 (ACO2)","ACONITASE 2 (ACO2)"," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G05710","AT2G05710.1","Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","protein_coding","ACONITASE 3 (ACO3)","ACONITASE 3 (ACO3)"," ","GO:0044444 cytoplasmic part ","C ","6.59e-04 ","36/55 (65.5%) ","9890/30324 (32.6%) ","ACO2 AT5G65440 ACO3 AT3G55410 ATPA YCF10 AT5G58100 PHS1 BRI1 AT3G42628 CEV1 BSL3 POLGAMMA2 AT3G23750 KUP5 ECA3 AT1G09620 AT4G27640 AT3G59020 AT2G15900 POLGAMMA1 TPL AT4G34810 MRL1 AT1G22610 PSBD AT2G46520 PSBC Tudor2 GLDP2 ATPF GLR3.4 AT2G07739 UBA 2 CPuORF25 SPS1F"," "]
["AT5G22770","AT5G22770.1","alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink).","protein_coding","ALPHA-ADAPTIN (alpha-ADR)","ALPHA-ADAPTIN (alpha-ADR)"," ","GO:0005737 cytoplasm ","C ","3.51e-03 ","39/55 (70.9%) ","12114/30324 (39.9%) ","ACO2 AT5G65440 ACO3 AT3G55410 ATPA YCF10 AT5G58100 PHS1 BRI1 AT3G42628 CEV1 BSL3 POLGAMMA2 AT3G23750 YDA KUP5 ECA3 AT1G09620 AT4G27640 AT3G59020 AT2G15900 POLGAMMA1 TPL AT4G34810 MRL1 SLOMO AT1G22610 PSBD AT2G46520 PSBC Tudor2 GLDP2 ATPF GLR3.4 AT2G07739 UBA 2 AT4G19110 CPuORF25 SPS1F"," "]
["AT3G29320","AT3G29320.1","Encodes a plastidic alpha-glucan phosphorylase.  In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.","protein_coding","ALPHA-GLUCAN PHOSPHORYLASE 1 (PHS1)","ALPHA-GLUCAN PHOSPHORYLASE 1 (PHS1)"," ","GO:0005643 nuclear pore ","C ","5.81e-03 ","3/55 (5.5%) ","19/30324 (0.1%) ","AT4G27640 AT3G59020 AT2G46520"," "]
["ATCG00120","ATCG00120.1","Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.","protein_coding","ATP SYNTHASE SUBUNIT ALPHA (ATPA)","ATP SYNTHASE SUBUNIT ALPHA (ATPA)"," ","GO:0046930 pore complex ","C ","5.81e-03 ","3/55 (5.5%) ","19/30324 (0.1%) ","AT4G27640 AT3G59020 AT2G46520"," "]
["AT4G39400","AT4G39400.1","Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution.  Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.","protein_coding","BRASSINOSTEROID INSENSITIVE 1 (BRI1)","BRASSINOSTEROID INSENSITIVE 1 (BRI1);CABBAGE 2 (CBB2); (ATBRI1);BR INSENSITIVE 1 (BIN1);DWARF 2 (DWF2)"," ","GO:0005635 nuclear envelope ","C ","9.85e-03 ","4/55 (7.3%) ","72/30324 (0.2%) ","AT4G27640 AT3G59020 AT2G46520 Tudor2"," "]
["AT2G27210","AT2G27210.1","BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, iron ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 3 (BSL3)","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 3 (BSL3)"," ",{"$nulls":6}," "]
["AT4G19112","AT4G19112.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF25 represents a conserved upstream opening reading frame relative to major ORF AT4G19110.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 25 (CPuORF25)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 25 (CPuORF25)"," ","  ",{"$nulls":5}," "]
["AT5G05170","AT5G05170.1","Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis.  As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification.","protein_coding","CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1)","ECTOPIC LIGNIFICATION 1 (ELI1);MULTIPLE RESPONSE EXPANSION 1 (MRE1);CELLULOSE SYNTHASE 3 (CESA3);CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); (ATCESA3); (ATH-B);ISOXABEN RESISTANT  1 (IXR1)"," ",{"$nulls":6}," "]
["AT5G04560","AT5G04560.2","Encodes a DNA glycosylase DEMETER (DME).  Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene.  DME can excise 5-methylcytosine in vitro and when expressed in E. coli.  DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.","protein_coding","DEMETER (DME)","DEMETER (DME)"," ",{"$nulls":6}," "]
["AT1G10130","AT1G10130.1","Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.","protein_coding","ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3 (ECA3)","ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3 (ECA3);ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 3 (ATECA3)"," ",{"$nulls":6}," "]
["AT5G09410","AT5G09410.3","calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum)","protein_coding","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)"," ",{"$nulls":6}," "]
["AT4G10710","AT4G10710.1","encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.","protein_coding","GLOBAL TRANSCRIPTION FACTOR C (SPT16)","GLOBAL TRANSCRIPTION FACTOR C (SPT16)"," ",{"$nulls":6}," "]
["AT1G05200","AT1G05200.1","Encodes a putative glutamate receptor GLR3 with dual localization in plastid and plasma membrane.","protein_coding","GLUTAMATE RECEPTOR 3.4 (GLR3.4)","GLUTAMATE RECEPTOR 3.4 (ATGLR3.4); (GLUR3);GLUTAMATE RECEPTOR 3.4 (GLR3.4)"," ",{"$nulls":6}," "]
["AT2G26080","AT2G26080.1","glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink).","protein_coding","GLYCINE DECARBOXYLASE P-PROTEIN 2 (GLDP2)","GLYCINE DECARBOXYLASE P-PROTEIN 2 (GLDP2);GLYCINE DECARBOXYLASE P-PROTEIN 2 (AtGLDP2)"," ",{"$nulls":6}," "]
["AT4G33530","AT4G33530.1","potassium transporter","protein_coding","K+ UPTAKE PERMEASE 5 (KUP5)","K+ UPTAKE PERMEASE 5 (KUP5)"," ",{"$nulls":6}," "]
["AT4G34830","AT4G34830.1","Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.","protein_coding","MATURATION OF RBCL 1 (MRL1)","PIGMENT DEFECTIVE 346 (PDE346);MATURATION OF RBCL 1 (MRL1)"," ",{"$nulls":6}," "]
["ATCG00280","ATCG00280.1","chloroplast gene encoding a CP43 subunit of  the photosystem II reaction center. promoter contains a blue-light responsive element.","protein_coding","PHOTOSYSTEM II REACTION CENTER PROTEIN C (PSBC)","PHOTOSYSTEM II REACTION CENTER PROTEIN C (PSBC)"," ",{"$nulls":6}," "]
["ATCG00270","ATCG00270.1","PSII D2 protein","protein_coding","PHOTOSYSTEM II REACTION CENTER PROTEIN D (PSBD)","PHOTOSYSTEM II REACTION CENTER PROTEIN D (PSBD)"," ",{"$nulls":6}," "]
["AT3G20540","AT3G20540.2","Encodes an organellar DNA polymerase I that is also involved in double strand break repair.","protein_coding","POLYMERASE GAMMA 1 (POLGAMMA1)","POLYMERASE GAMMA 1 (POLGAMMA1);POLYMERASE I B (PolIB)"," ",{"$nulls":6}," "]
["AT1G50840","AT1G50840.1","DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation.","protein_coding","POLYMERASE GAMMA 2 (POLGAMMA2)","POLYMERASE GAMMA 2 (POLGAMMA2);POLYMERASE I A (PolIA)"," ",{"$nulls":6}," "]
["AT4G33210","AT4G33210.1","Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem.","protein_coding","SLOW MOTION (SLOMO)","SLOW MOTION (SLOMO)"," ",{"$nulls":6}," "]
["AT1G20980","AT1G20980.1","Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture.","protein_coding","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (SPL14)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (SPL14);SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (ATSPL14); (SPL1R2); (FBR6)"," ",{"$nulls":6}," "]
["AT5G20280","AT5G20280.1","Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.","protein_coding","SUCROSE PHOSPHATE SYNTHASE 1F (SPS1F)","SUCROSE PHOSPHATE SYNTHASE 1F (SPS1F);SUCROSE PHOSPHATE SYNTHASE 1F (ATSPS1F);SUCROSE-PHOSPHATE SYNTHASE A1 (SPSA1)"," ",{"$nulls":6}," "]
["AT1G15750","AT1G15750.1","Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus.  Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.","protein_coding","TOPLESS (TPL)","TOPLESS (TPL);WUS-INTERACTING PROTEIN 1 (WSIP1)"," ",{"$nulls":6}," "]
["AT5G61780","AT5G61780.1","Involved in the regulation of  AtGA20ox3 expression, as well as seed germination.","protein_coding","TUDOR-SN PROTEIN 2 (TUDOR2)","TUDOR-SN PROTEIN 2 (TUDOR2);TUDOR-SN PROTEIN 2 (TSN2);ARABIDOPSIS THALIANA TUDOR-SN PROTEIN 2 (AtTUDOR2)"," ",{"$nulls":6}," "]
["AT5G06460","AT5G06460.1","Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.","protein_coding","UBIQUITIN ACTIVATING ENZYME 2 (UBA 2)","UBIQUITIN ACTIVATING ENZYME 2 (UBA 2);ARABIDOPSIS THALIANA  UBIQUITIN ACTIVATING ENZYME 2 (ATUBA2)"," ",{"$nulls":6}," "]
["AT2G40930","AT2G40930.1","Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation.","protein_coding","UBIQUITIN-SPECIFIC PROTEASE 5 (UBP5)","UBIQUITIN-SPECIFIC PROTEASE 5 (UBP5);PIGMENT DEFECTIVE EMBRYO 323 (PDE323); (ATUBP5)"," ",{"$nulls":6}," "]
["AT1G63700","AT1G63700.1","Member of MEKK subfamily, a component of the stomatal development regulatory pathway.  Mutations in this locus result in embryo lethality.","protein_coding","YODA (YDA)","EMBRYO DEFECTIVE 71 (EMB71);YODA (YDA);MAP KINASE KINASE KINASE 4 (MAPKKK4)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G44575","AT5G44575.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT5G39160","AT5G39160.1","RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G02540","AT5G02540.1","NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010038 response to metal ion ","P ","3.65e-05 ","9/39 (23.1%) ","604/30324 (2.0%) ","NRAMP3 FER4 PCK1 YSL1 FER1 AER MPK4 CSD2 ADH1"," "]
["AT5G38200","AT5G38200.1","Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3533 Blast hits to 3529 proteins in 1172 species: Archae - 17; Bacteria - 2871; Metazoa - 1; Fungi - 3; Plants - 53; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","1.52e-04 ","18/39 (46.2%) ","3789/30324 (12.5%) ","NRAMP3 AT5G16980 FER4 PCK1 YSL1 AtLEA4-1 FER1 M17 AER MPK4 EBP CSD2 LOL1 GRP5 AT3G46280 ADH1 AT1G15330 EARLI1"," "]
["AT3G43670","AT3G43670.1","Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1555 Blast hits to 1551 proteins in 277 species: Archae - 14; Bacteria - 383; Metazoa - 247; Fungi - 452; Plants - 241; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010039 response to iron ion ","P ","4.45e-04 ","4/39 (10.3%) ","54/30324 (0.2%) ","FER4 YSL1 FER1 CSD2"," "]
["AT2G14840","AT2G14840.1","pseudogene, similar to phosphoenolpyruvate carboxykinase, similar to GB:L31899; frameshift at base 16259 possibly caused by a base a pair deletion.; blastp match of 72% identity and 3.7e-81 P-value to GP|13785471|dbj|BAB43909.1||AB050473 phosphoenolpyruvate carboxykinase {Flaveria pringlei}","pseudogene",null,null," ","GO:0010035 response to inorganic substance ","P ","7.04e-04 ","11/39 (28.2%) ","1417/30324 (4.7%) ","NRAMP3 FER4 PCK1 YSL1 AtLEA4-1 FER1 AER MPK4 CSD2 LOL1 ADH1"," "]
["AT5G47590","AT5G47590.1","Heat shock protein HSP20/alpha crystallin family; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Small heat shock protein, predicted, plant (InterPro:IPR016952), Peptidase A1 (InterPro:IPR001461), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperone (TAIR:AT4G16550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0055072 iron ion homeostasis ","P ","6.00e-03 ","3/39 (7.7%) ","32/30324 (0.1%) ","NRAMP3 FER4 FER1"," "]
["AT3G43820","AT3G43820.1","pseudogene, copper amine oxidase protein family, similar to SP|Q43077 Amine oxidase (copper-containing) precursor (EC 1.4.3.6) {Pisum sativum}; contains Pfam profile PF01179: Copper amine oxidase, enzyme domain; blastp match of 57% identity and 2.6e-48 P-value to GP|5733089|gb|AAD49420.1|AF172681_1|AF172681 amine oxidase {Canavalia lineata}","pseudogene",null,null," ",{"$nulls":6}," "]
["AT5G45310","AT5G45310.1","unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: stem, inflorescence meristem, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT5G28996","AT5G28996.1","pseudogene, similar to ATP-dependent phosphoenolpyruvate carboxykinase, blastp match of 83% identity and 1.2e-13 P-value to GP|6707571|gb|AAF25671.1|AF212109_1|AF212109 ATP-dependent phosphoenolpyruvate carboxykinase {Medicago sativa}","pseudogene",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT3G49160","AT3G49160.1","Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G15330","AT1G15330.1","Cystathionine beta-synthase (CBS) protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G80090.1); Has 526 Blast hits to 526 proteins in 132 species: Archae - 6; Bacteria - 4; Metazoa - 257; Fungi - 91; Plants - 124; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).","protein_coding",null,null," ","GO:0008199 ferric iron binding ","F ","6.09e-03 ","2/39 (5.1%) ","4/30324 (0.0%) ","FER4 FER1"," "]
["AT5G16980","AT5G16980.2","Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cyclopentenone; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G60740","AT1G60740.1","Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 4009 Blast hits to 4009 proteins in 876 species: Archae - 11; Bacteria - 1529; Metazoa - 175; Fungi - 308; Plants - 243; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT1G09230","AT1G09230.1","RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 908 Blast hits to 898 proteins in 138 species: Archae - 0; Bacteria - 6; Metazoa - 655; Fungi - 76; Plants - 104; Viruses - 1; Other Eukaryotes - 66 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G46280","AT3G46280.1","protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: receptor protein kinase-related (TAIR:AT3G46270.1); Has 639 Blast hits to 634 proteins in 40 species: Archae - 0; Bacteria - 5; Metazoa - 5; Fungi - 8; Plants - 619; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G41260","AT2G41260.2","Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.","protein_coding"," (M17)"," (ATM17); (M17)"," ",{"$nulls":6}," "]
["AT2G28630","AT2G28630.1","Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","protein_coding","3-KETOACYL-COA SYNTHASE 12 (KCS12)","3-KETOACYL-COA SYNTHASE 12 (KCS12)"," ",{"$nulls":6}," "]
["AT1G77120","AT1G77120.1","Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","protein_coding","ALCOHOL DEHYDROGENASE 1 (ADH1)","ALCOHOL DEHYDROGENASE 1 (ADH1); (ATADH1);ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE (ATADH);ALCOHOL DEHYDROGENASE (ADH)"," ",{"$nulls":6}," "]
["AT5G16970","AT5G16970.1","encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls","protein_coding","ALKENAL REDUCTASE (AER)","ALKENAL REDUCTASE (AER);ALKENAL REDUCTASE (AT-AER)"," ",{"$nulls":6}," "]
["AT1G17810","AT1G17810.1","beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","protein_coding","BETA-TONOPLAST INTRINSIC PROTEIN (BETA-TIP)","BETA-TONOPLAST INTRINSIC PROTEIN (BETA-TIP)"," ",{"$nulls":6}," "]
["AT2G28190","AT2G28190.1","Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS.","protein_coding","COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CSD2)","COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CZSOD2);COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CSD2)"," ",{"$nulls":6}," "]
["AT4G12480","AT4G12480.1","a putative lipid transfer protein, vernalization-responsive and cold-induced","protein_coding","EARLY ARABIDOPSIS ALUMINUM INDUCED 1 (EARLI1)"," (pEARLI 1);EARLY ARABIDOPSIS ALUMINUM INDUCED 1 (EARLI1)"," ",{"$nulls":6}," "]
["AT3G16770","AT3G16770.1","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3).  The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6.   It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.","protein_coding","ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP)","ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (ATEBP);RELATED TO AP2 3 (RAP2.3);ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP);ETHYLENE RESPONSE FACTOR 72 (ERF72)"," ",{"$nulls":6}," "]
["AT5G01600","AT5G01600.1","Encodes  a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","protein_coding","FERRETIN 1 (FER1)","FERRETIN 1 (FER1);ARABIDOPSIS THALIANA FERRETIN 1 (ATFER1)"," ",{"$nulls":6}," "]
["AT2G40300","AT2G40300.1","Encodes FERRITIN 4, AtFER4.  Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life.  Function as the main iron store in mammals.  Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.","protein_coding","FERRITIN 4 (FER4)","FERRITIN 4 (FER4);FERRITIN 4 (ATFER4)"," ",{"$nulls":6}," "]
["AT1G09420","AT1G09420.2","Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH.  The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein.  gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","protein_coding","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4 (G6PD4)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4 (G6PD4)"," ",{"$nulls":6}," "]
["AT3G20470","AT3G20470.1","encodes a glycine-rich protein that is expressed more abundantly in immature seed pods than in stems and leaves. Expression is not detected in roots or flowers.","protein_coding","GLYCINE-RICH PROTEIN 5 (GRP5)","GLYCINE-RICH PROTEIN 5 (GRP-5); (ATGRP5);GLYCINE-RICH PROTEIN 5 (GRP5); (ATGRP-5)"," ",{"$nulls":6}," "]
["AT1G32560","AT1G32560.1","Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","protein_coding","LATE EMBRYOGENESIS ABUNDANT 4-1 (AtLEA4-1)","LATE EMBRYOGENESIS ABUNDANT 4-1 (LEA4-1);LATE EMBRYOGENESIS ABUNDANT 4-1 (AtLEA4-1)"," ",{"$nulls":6}," "]
["AT2G02147","AT2G02147.1","Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","protein_coding","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 73 (LCR73)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 73 (LCR73)"," ",{"$nulls":6}," "]
["AT1G32540","AT1G32540.1","Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.","protein_coding","LSD ONE LIKE 1 (LOL1)","LSD ONE LIKE 1 (LOL1)"," ",{"$nulls":6}," "]
["AT4G01370","AT4G01370.1","Encodes a nuclear and cytoplasmically localized  MAP kinase involved in mediating responses to pathogens.  Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis.","protein_coding","MAP KINASE 4 (MPK4)","MAP KINASE 4 (ATMPK4);MAP KINASE 4 (MPK4)"," ",{"$nulls":6}," "]
["AT2G23150","AT2G23150.1","Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.","protein_coding","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3 (NRAMP3)"," (ATNRAMP3);NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3 (NRAMP3)"," ",{"$nulls":6}," "]
["AT4G37870","AT4G37870.1","Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol.","protein_coding","PHOSPHOENOLPYRUVATE CARBOXYKINASE 1 (PCK1)","PHOSPHOENOLPYRUVATE CARBOXYKINASE (PEPCK);PHOSPHOENOLPYRUVATE CARBOXYKINASE 1 (PCK1)"," ",{"$nulls":6}," "]
["AT2G18328","AT2G18328.1","RAD-like 4 (RL4); FUNCTIONS IN: DNA binding; EXPRESSED IN: rosette leaf; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: RAD-like 1 (TAIR:AT4G39250.1); Has 590 Blast hits to 589 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 0; Plants - 467; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).","protein_coding","RAD-LIKE 4 (RL4)","RAD-LIKE 4 (ATRL4);RAD-LIKE 4 (RL4)"," ",{"$nulls":6}," "]
["AT1G03790","AT1G03790.1","Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein.  SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","protein_coding","SOMNUS (SOM)","SOMNUS (SOM)"," ",{"$nulls":6}," "]
["AT1G69230","AT1G69230.1","SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.","protein_coding","SPIRAL1-LIKE2 (SP1L2)","SPIRAL1-LIKE2 (SP1L2)"," ",{"$nulls":6}," "]
["AT4G08390","AT4G08390.1","Encodes a chloroplastic stromal ascorbate peroxidase sAPX.  Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells.  Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","protein_coding","STROMAL ASCORBATE PEROXIDASE (SAPX)","STROMAL ASCORBATE PEROXIDASE (SAPX)"," ",{"$nulls":6}," "]
["AT1G65970","AT1G65970.1","thioredoxin-dependent peroxidase 2","protein_coding","THIOREDOXIN-DEPENDENT PEROXIDASE 2 (TPX2)","THIOREDOXIN-DEPENDENT PEROXIDASE 2 (TPX2)"," ",{"$nulls":6}," "]
["AT5G43290","AT5G43290.1","member of WRKY Transcription Factor; Group II-c","protein_coding","WRKY DNA-BINDING PROTEIN 49 (WRKY49)","WRKY DNA-BINDING PROTEIN 49 (WRKY49);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 49 (ATWRKY49)"," ",{"$nulls":6}," "]
["AT4G24120","AT4G24120.1","Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1).","protein_coding","YELLOW STRIPE LIKE 1 (YSL1)","YELLOW STRIPE LIKE 1 (YSL1);YELLOW STRIPE LIKE 1 (ATYSL1)"," ",{"$nulls":6}," "]
["AT1G65730","AT1G65730.1","Arabidopsis thaliana metal-nicotianamine transporter YSL4","protein_coding","YELLOW STRIPE LIKE 7 (YSL7)","YELLOW STRIPE LIKE 7 (YSL7)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G17147","AT1G17147.1","VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G78410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G71520","AT1G71520.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G14480","AT1G14480.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G14500.1); Has 8895 Blast hits to 5065 proteins in 313 species: Archae - 10; Bacteria - 564; Metazoa - 4493; Fungi - 246; Plants - 1339; Viruses - 29; Other Eukaryotes - 2214 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","1.56e-24 ","23/61 (37.7%) ","422/30324 (1.4%) ","AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 AT3G46930 AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 MYB51 AT2G41640 UCP5 BBX32 RDUF2 LECRKA4.2 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT4G29780","AT4G29780.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","3.68e-24 ","23/61 (37.7%) ","438/30324 (1.4%) ","AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 AT3G46930 AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 MYB51 AT2G41640 UCP5 BBX32 RDUF2 LECRKA4.2 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT5G41750","AT5G41750.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","2.57e-18 ","23/61 (37.7%) ","792/30324 (2.6%) ","AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 AT3G46930 AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 MYB51 AT2G41640 UCP5 BBX32 RDUF2 LECRKA4.2 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT4G22030","AT4G22030.1","CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04480.1); Has 486 Blast hits to 359 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 482; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","1.46e-16 ","29/61 (47.5%) ","1879/30324 (6.2%) ","AT3G09870 AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 CYP81D8 AT3G46930 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 AT1G20310 MYB51 AT2G41640 UCP5 BBX32 AT4G37290 RDUF2 LECRKA4.2 GATL10 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT1G20310","AT1G20310.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76070.1); Has 46 Blast hits to 46 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","6.76e-13 ","30/61 (49.2%) ","2805/30324 (9.3%) ","AT3G09870 AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 CYP81D8 AT3G46930 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 AT1G20310 MYB51 AT2G41640 UCP5 BBX32 AT4G37290 RDUF2 CML37 LECRKA4.2 GATL10 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT1G07160","AT1G07160.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast, protein serine/threonine phosphatase complex; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 7376 Blast hits to 7203 proteins in 674 species: Archae - 10; Bacteria - 746; Metazoa - 1767; Fungi - 814; Plants - 2696; Viruses - 11; Other Eukaryotes - 1332 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","1.92e-11 ","27/61 (44.3%) ","2459/30324 (8.1%) ","AT1G24140 LYK5 AT5G05300 PUB29 AT2G39650 AT3G46930 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 AT1G20310 MYB51 AT2G41640 UCP5 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT1G30190","AT1G30190.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","2.77e-10 ","31/61 (50.8%) ","3789/30324 (12.5%) ","AT3G09870 AT1G24140 LYK5 AT5G05300 PUB29 AT4G19520 AT2G39650 CYP81D8 AT3G46930 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 ZAT6 S6K2 AT1G20310 MYB51 AT2G41640 UCP5 BBX32 AT4G37290 RDUF2 CML37 LECRKA4.2 GATL10 AT1G71520 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT2G18210","AT2G18210.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043450 alkene biosynthetic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT5G62150","AT5G62150.1","peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1900673 olefin metabolic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT3G55840","AT3G55840.1","Hs1pro-1 protein; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: ortholog of sugar beet HS1 PRO-1 2 (TAIR:AT2G40000.1); Has 60 Blast hits to 60 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1900674 olefin biosynthetic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT4G19520","AT4G19520.1","disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G51560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043449 cellular alkene metabolic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT5G36925","AT5G36925.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36920.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009693 ethylene biosynthetic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT1G02360","AT1G02360.1","Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, leaf whorl, root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2043 Blast hits to 2034 proteins in 421 species: Archae - 0; Bacteria - 465; Metazoa - 37; Fungi - 5; Plants - 1453; Viruses - 2; Other Eukaryotes - 81 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009692 ethylene metabolic process ","P ","1.57e-09 ","9/61 (14.8%) ","120/30324 (0.4%) ","AT1G24140 AT5G05300 AT2G39650 AT5G52050 AT1G20310 AT4G37290 RDUF2 CML37 AT3G55840"," "]
["AT4G14450","AT4G14450.1","unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","2.76e-09 ","21/61 (34.4%) ","1667/30324 (5.5%) ","AT5G05300 AT4G19520 AT1G72910 AT4G14370 AT5G62150 AT2G39650 GILP LECRKA4.1 WRKY33 EP3 AT5G52050 S6K2 AT1G20310 MYB51 RDUF2 AT5G41750 CML37 AT5G41740 AT1G02360 AT3G55840 BAP1"," "]
["AT1G06135","AT1G06135.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31345.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","6.87e-09 ","38/61 (62.3%) ","6619/30324 (21.8%) ","AT3G09870 AT1G24140 LYK5 AT5G05300 PUB29 AT4G19520 AT1G72910 AT4G14370 AT5G62150 AT2G39650 CYP81D8 AT3G46930 GA2OX6 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 AT5G52050 ZAT6 S6K2 AT1G20310 MYB51 AT2G41640 UCP5 BBX32 AT4G37290 RDUF2 AT5G41750 CML37 LECRKA4.2 GATL10 AT1G71520 AT5G41740 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT5G05300","AT5G05300.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","3.46e-07 ","28/61 (45.9%) ","4028/30324 (13.3%) ","AT1G24140 AT5G05300 AT4G19520 AT1G72910 AT4G14370 AT5G62150 AT2G39650 CYP81D8 AT3G46930 GA2OX6 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 AT5G52050 S6K2 AT1G20310 MYB51 RDUF2 AT5G41750 CML37 GATL10 AT5G41740 AT1G02360 AT5G57510 AT3G55840 BAP1"," "]
["AT1G27890","AT1G27890.1","Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G27820.1); Has 867 Blast hits to 866 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 251; Fungi - 146; Plants - 350; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).","protein_coding",null,null," ","GO:0030968 endoplasmic reticulum unfolded protein response ","P ","2.36e-06 ","8/61 (13.1%) ","186/30324 (0.6%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT4G14370","AT4G14370.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 20031 Blast hits to 15847 proteins in 637 species: Archae - 20; Bacteria - 2181; Metazoa - 1543; Fungi - 27; Plants - 15753; Viruses - 2; Other Eukaryotes - 505 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035967 cellular response to topologically incorrect protein ","P ","2.57e-06 ","8/61 (13.1%) ","188/30324 (0.6%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT5G52050","AT5G52050.1","MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G23030.1); Has 10796 Blast hits to 10712 proteins in 2003 species: Archae - 245; Bacteria - 7617; Metazoa - 145; Fungi - 324; Plants - 1294; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034620 cellular response to unfolded protein ","P ","2.57e-06 ","8/61 (13.1%) ","188/30324 (0.6%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT1G24140","AT1G24140.1","Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006986 response to unfolded protein ","P ","2.57e-06 ","8/61 (13.1%) ","188/30324 (0.6%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT5G41740","AT5G41740.2","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006984 ER-nucleus signaling pathway ","P ","3.28e-06 ","8/61 (13.1%) ","194/30324 (0.6%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT3G09870","AT3G09870.1","SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G28085.1); Has 997 Blast hits to 995 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 996; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0070887 cellular response to chemical stimulus ","P ","1.06e-05 ","16/61 (26.2%) ","1445/30324 (4.8%) ","AT1G24140 LYK5 AT4G19520 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 RDUF2 CML37 LECRKA4.2 GATL10 AT5G57510"," "]
["AT1G72910","AT1G72910.1","Toll-Interleukin-Resistance (TIR) domain-containing protein; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72900.1); Has 4443 Blast hits to 4310 proteins in 184 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 4322; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034976 response to endoplasmic reticulum stress ","P ","2.22e-05 ","9/61 (14.8%) ","353/30324 (1.2%) ","AT1G24140 AT5G62150 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT3G46930","AT3G46930.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 131220 Blast hits to 129723 proteins in 5271 species: Archae - 120; Bacteria - 14071; Metazoa - 50237; Fungi - 12125; Plants - 33600; Viruses - 536; Other Eukaryotes - 20531 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051716 cellular response to stimulus ","P ","3.64e-05 ","21/61 (34.4%) ","2811/30324 (9.3%) ","AT1G24140 LYK5 AT4G19520 AT4G14370 AT5G62150 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 EP3 S6K2 AT1G20310 MYB51 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT5G57510 AT3G55840"," "]
["AT2G39650","AT2G39650.1","Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007165 signal transduction ","P ","5.08e-05 ","16/61 (26.2%) ","1618/30324 (5.3%) ","AT1G24140 AT4G14370 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT3G55840"," "]
["AT2G41640","AT2G41640.1","Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1); Has 674 Blast hits to 674 proteins in 105 species: Archae - 0; Bacteria - 55; Metazoa - 158; Fungi - 12; Plants - 386; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071310 cellular response to organic substance ","P ","9.53e-05 ","14/61 (23.0%) ","1261/30324 (4.2%) ","AT1G24140 LYK5 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 RDUF2 CML37 LECRKA4.2 GATL10"," "]
["AT5G01100","AT5G01100.1","O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033554 cellular response to stress ","P ","9.75e-05 ","15/61 (24.6%) ","1474/30324 (4.9%) ","AT1G24140 AT4G19520 AT5G62150 AT2G39650 GILP LECRKA4.1 WRKY33 EP3 S6K2 AT1G20310 MYB51 RDUF2 CML37 GATL10 AT5G57510"," "]
["AT4G37290","AT4G37290.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045730 respiratory burst ","P ","1.07e-04 ","6/61 (9.8%) ","122/30324 (0.4%) ","AT2G39650 WRKY33 EP3 RDUF2 AT1G02360 AT3G55840"," "]
["AT3G27140","AT3G27140.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G08260.1); Has 3934 Blast hits to 3934 proteins in 277 species: Archae - 0; Bacteria - 6; Metazoa - 1049; Fungi - 401; Plants - 1950; Viruses - 3; Other Eukaryotes - 525 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002679 respiratory burst involved in defense response ","P ","1.07e-04 ","6/61 (9.8%) ","122/30324 (0.4%) ","AT2G39650 WRKY33 EP3 RDUF2 AT1G02360 AT3G55840"," "]
["AT5G43420","AT5G43420.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044700 single organism signaling ","P ","1.11e-04 ","16/61 (26.2%) ","1713/30324 (5.6%) ","AT1G24140 AT4G14370 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT3G55840"," "]
["AT3G52520","AT3G52520.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0023052 signaling ","P ","1.12e-04 ","16/61 (26.2%) ","1714/30324 (5.7%) ","AT1G24140 AT4G14370 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT3G55840"," "]
["AT5G57510","AT5G57510.1","unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010286 heat acclimation ","P ","4.67e-04 ","5/61 (8.2%) ","84/30324 (0.3%) ","CYP81D8 GA2OX6 WRKY33 CML37 BAP1"," "]
["AT4G11070","AT4G11070.1","member of WRKY Transcription Factor; Group III","protein_coding"," (WRKY41)"," (AtWRKY41); (WRKY41)"," ","GO:0035966 response to topologically incorrect protein ","P ","4.69e-04 ","8/61 (13.1%) ","370/30324 (1.2%) ","AT1G24140 AT2G39650 GILP LECRKA4.1 S6K2 RDUF2 CML37 GATL10"," "]
["AT4G37370","AT4G37370.1","member of CYP81D","protein_coding","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 8 (CYP81D8)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 8 (CYP81D8)"," ","GO:0071495 cellular response to endogenous stimulus ","P ","4.95e-04 ","11/61 (18.0%) ","839/30324 (2.8%) ","LYK5 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 RDUF2 LECRKA4.2 GATL10"," "]
["AT3G21150","AT3G21150.1","Encodes a protein with a B-box domain predicted to act as a transcription factor. Expression of the BBX32 gene is affected by monochromatic red light.","protein_coding","B-BOX DOMAIN PROTEIN 32 (BBX32)","B-BOX DOMAIN PROTEIN 32 (BBX32); (ATBBX32);EMF1-INTERACTING PROTEIN 1 (EIP6)"," ","GO:0002376 immune system process ","P ","5.20e-04 ","12/61 (19.7%) ","1032/30324 (3.4%) ","AT5G62150 AT2G39650 GILP LECRKA4.1 WRKY33 EP3 S6K2 AT1G20310 MYB51 RDUF2 AT1G02360 AT3G55840"," "]
["AT3G61190","AT3G61190.1","Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis.","protein_coding","BON ASSOCIATION PROTEIN 1 (BAP1)","BON ASSOCIATION PROTEIN 1 (BAP1)"," ","GO:0035556 intracellular signal transduction ","P ","8.39e-04 ","8/61 (13.1%) ","400/30324 (1.3%) ","AT2G39650 LECRKA4.1 WRKY33 S6K2 MYB51 RDUF2 GATL10 AT3G55840"," "]
["AT5G42380","AT5G42380.1","calmodulin like 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","CALMODULIN LIKE 37 (CML37)","CALMODULIN LIKE 37 (CML37);CALMODULIN LIKE 39 (CML39)"," ","GO:0007154 cell communication ","P ","1.40e-03 ","16/61 (26.2%) ","2073/30324 (6.8%) ","AT1G24140 AT4G14370 AT2G39650 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 BBX32 RDUF2 CML37 LECRKA4.2 GATL10 AT3G55840"," "]
["AT4G11470","AT4G11470.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 31 (CRK31)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 31 (CRK31)"," ","GO:0009755 hormone-mediated signaling pathway ","P ","2.40e-03 ","10/61 (16.4%) ","795/30324 (2.6%) ","GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 RDUF2 LECRKA4.2 GATL10"," "]
["AT3G09520","AT3G09520.1","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","protein_coding","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H4 (EXO70H4)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H4 (ATEXO70H4);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H4 (EXO70H4)"," ","GO:0009725 response to hormone stimulus ","P ","2.54e-03 ","14/61 (23.0%) ","1662/30324 (5.5%) ","AT3G09870 CYP81D8 GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 AT4G37290 RDUF2 LECRKA4.2 GATL10 BAP1"," "]
["AT3G28340","AT3G28340.1","Encodes a protein with  putative galacturonosyltransferase activity.","protein_coding","GALACTURONOSYLTRANSFERASE-LIKE 10 (GATL10)","GALACTINOL SYNTHASE 8 (GolS8);GALACTURONOSYLTRANSFERASE-LIKE 10 (GATL10)"," ","GO:0032870 cellular response to hormone stimulus ","P ","3.65e-03 ","10/61 (16.4%) ","834/30324 (2.8%) ","GILP AT4G29780 LECRKA4.1 WRKY33 S6K2 AT1G20310 MYB51 RDUF2 LECRKA4.2 GATL10"," "]
["AT1G02400","AT1G02400.1","Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.","protein_coding","GIBBERELLIN 2-OXIDASE 6 (GA2OX6)","ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 4 (ATGA2OX4);ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6 (ATGA2OX6);GIBBERELLIN 2-OXIDASE 6 (GA2OX6);DOWNSTREAM TARGET OF AGL15 1 (DTA1)"," ","GO:0052542 defense response by callose deposition ","P ","4.96e-03 ","4/61 (6.6%) ","63/30324 (0.2%) ","AT2G39650 AT5G52050 MYB51 CML37"," "]
["AT4G01950","AT4G01950.1","Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.","protein_coding","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 (GPAT3)"," (ATGPAT3);GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 (GPAT3)"," ",{"$nulls":6}," "]
["AT5G13190","AT5G13190.1","Encodes a plasma membrane localized LITAF domain protein that interacts with LSD1 and acts as a negative regulation of hypersensitive cell death.","protein_coding","GSH-INDUCED LITAF DOMAIN PROTEIN (GILP)","GSH-INDUCED LITAF DOMAIN PROTEIN (GILP); (AtGILP)"," ","  ",{"$nulls":5}," "]
["AT3G54420","AT3G54420.1","encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot.  Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.","protein_coding","HOMOLOG OF CARROT EP3-3 CHITINASE (EP3)","HOMOLOG OF CARROT EP3-3 CHITINASE (ATEP3);HOMOLOG OF CARROT EP3-3 CHITINASE (EP3); (CHIV);CHITINASE CLASS IV (ATCHITIV)"," ",{"$nulls":6}," "]
["AT5G01540","AT5G01540.1","Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560).  Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.","protein_coding","LECTIN RECEPTOR KINASE A4.1 (LECRKA4.1)","LECTIN RECEPTOR KINASE A4.1 (LECRKA4.1)"," ",{"$nulls":6}," "]
["AT5G01550","AT5G01550.1","Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560).  Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.","protein_coding","LECTIN RECEPTOR KINASE A4.1 (LECRKA4.2)","LECTIN RECEPTOR KINASE A4.1 (LECRKA4.2)"," ",{"$nulls":6}," "]
["AT2G33580","AT2G33580.1","Encodes a LysM-containing receptor-like kinase.  Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.","protein_coding","LYSM-CONTAINING RECEPTOR-LIKE KINASE 5 (LYK5)","LYSM-CONTAINING RECEPTOR-LIKE KINASE 5 (LYK5)"," ",{"$nulls":6}," "]
["AT1G18570","AT1G18570.1","Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis.","protein_coding","MYB DOMAIN PROTEIN 51 (MYB51)"," (BW51B); (BW51A);MYB DOMAIN PROTEIN 51 (MYB51);MYB DOMAIN PROTEIN 51 (AtMYB51);HIGH INDOLIC GLUCOSINOLATE 1 (HIG1)"," ",{"$nulls":6}," "]
["AT3G21070","AT3G21070.1","Encodes a protein with NAD(H) kinase activity.","protein_coding","NAD KINASE 1 (NADK1)","NAD KINASE 1 (NADK1);NAD KINASE 1 (ATNADK-1)"," ",{"$nulls":6}," "]
["AT3G18710","AT3G18710.1","Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","protein_coding","PLANT U-BOX 29 (PUB29)","ARABIDOPSIS THALIANA PLANT U-BOX 29 (ATPUB29);PLANT U-BOX 29 (PUB29)"," ",{"$nulls":6}," "]
["AT4G18197","AT4G18197.1","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","protein_coding","PURINE PERMEASE 7 (PUP7)","ARABIDOPSIS THALIANA PURINE PERMEASE 7 (ATPUP7);PEROXIN 17 (PEX17);PURINE PERMEASE 7 (PUP7)"," ",{"$nulls":6}," "]
["AT4G18195","AT4G18195.1","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","protein_coding","PURINE PERMEASE 8 (PUP8)","PURINE PERMEASE 8 (PUP8);ARABIDOPSIS THALIANA PURINE PERMEASE 8 (ATPUP8)"," ",{"$nulls":6}," "]
["AT5G59550","AT5G59550.1","Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants.","protein_coding","RING AND DOMAIN OF UNKNOWN FUNCTION 1117 2 (RDUF2)","RING AND DOMAIN OF UNKNOWN FUNCTION 1117 2 (RDUF2);ARABIDOPSIS THALIANA RING AND DOMAIN OF UNKNOWN FUNCTION 1117 2 (ATRDUF2)"," ",{"$nulls":6}," "]
["AT3G08720","AT3G08720.1","Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl).  Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.","protein_coding","SERINE/THREONINE PROTEIN KINASE 2 (S6K2)","ARABIDOPSIS THALIANA PROTEIN KINASE 19 (ATPK19);ARABIDOPSIS THALIANA PROTEIN KINASE 2 (ATPK2);SERINE/THREONINE PROTEIN KINASE 2 (S6K2);ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2 (ATS6K2)"," ",{"$nulls":6}," "]
["AT2G47140","AT2G47140.1","NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink).","protein_coding","SHORT-CHAIN DEHYDROGENASE REDUCTASE 5 (SDR5)"," (ATSDR5);SHORT-CHAIN DEHYDROGENASE REDUCTASE 5 (SDR5)"," ",{"$nulls":6}," "]
["AT4G30430","AT4G30430.1","Member of TETRASPANIN family","protein_coding","TETRASPANIN9 (TET9)","TETRASPANIN9 (TET9)"," ",{"$nulls":6}," "]
["AT2G22500","AT2G22500.1","Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).","protein_coding","UNCOUPLING PROTEIN 5 (UCP5)","DICARBOXYLATE CARRIER 1 (DIC1);PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5 (ATPUMP5);UNCOUPLING PROTEIN 5 (UCP5)"," ",{"$nulls":6}," "]
["AT2G38470","AT2G38470.1","Member of the plant WRKY transcription factor family.  Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens.  Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.","protein_coding","WRKY DNA-BINDING PROTEIN 33 (WRKY33)","WRKY DNA-BINDING PROTEIN 33 (ATWRKY33);WRKY DNA-BINDING PROTEIN 33 (WRKY33)"," ",{"$nulls":6}," "]
["AT5G04340","AT5G04340.1","putative c2h2 zinc finger transcription factor mRNA,","protein_coding","ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6)"," (C2H2);ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6);COLD INDUCED ZINC FINGER PROTEIN 2 (CZF2)"," ",{"$nulls":6}," "]
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{"sheet":"11","index":11,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G67920","AT1G67920.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT2G47550","AT2G47550.1","Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2676 Blast hits to 2617 proteins in 319 species: Archae - 6; Bacteria - 600; Metazoa - 1; Fungi - 202; Plants - 1841; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G51270","AT1G51270.3","structural molecules;transmembrane receptors;structural molecules; FUNCTIONS IN: transmembrane receptor activity, structural molecule activity; INVOLVED IN: signal transduction, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45000.1); Has 3496 Blast hits to 2597 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 611; Fungi - 254; Plants - 2516; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).","protein_coding",null,null," ","GO:0000165 MAPK cascade ","P ","4.76e-05 ","6/32 (18.8%) ","222/30324 (0.7%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RLP23"," "]
["AT3G07600","AT3G07600.1","Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT5G48290.1); Has 932 Blast hits to 701 proteins in 113 species: Archae - 0; Bacteria - 150; Metazoa - 39; Fungi - 24; Plants - 521; Viruses - 17; Other Eukaryotes - 181 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007243 intracellular protein kinase cascade ","P ","5.02e-05 ","6/32 (18.8%) ","224/30324 (0.7%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RLP23"," "]
["AT1G11330","AT1G11330.2","S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1).","protein_coding",null,null," ","GO:0009814 defense response, incompatible interaction ","P ","5.06e-05 ","8/32 (25.0%) ","579/30324 (1.9%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 AT5G52740"," "]
["AT5G45000","AT5G45000.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: structural molecules;transmembrane receptors;structural molecules (TAIR:AT1G51270.2); Has 3171 Blast hits to 1622 proteins in 83 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 3091; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051707 response to other organism ","P ","1.11e-04 ","11/32 (34.4%) ","1535/30324 (5.1%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AT3G51450 AIG2 RABA1e RLP23 LACS3 AT5G52740 ASB1"," "]
["AT3G52748","AT3G52748.1","Unknown gene","other_rna",null,null," ","GO:0009607 response to biotic stimulus ","P ","1.12e-04 ","11/32 (34.4%) ","1536/30324 (5.1%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AT3G51450 AIG2 RABA1e RLP23 LACS3 AT5G52740 ASB1"," "]
["AT3G13435","AT3G13435.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009627 systemic acquired resistance ","P ","1.83e-04 ","7/32 (21.9%) ","460/30324 (1.5%) ","AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 AT5G52740"," "]
["AT5G12930","AT5G12930.1","unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","2.53e-04 ","11/32 (34.4%) ","1667/30324 (5.5%) ","AT5G45000 AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 LACS3 AT5G52740 RLP35"," "]
["AT1G08050","AT1G08050.1","Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60710.1); Has 3591 Blast hits to 3577 proteins in 633 species: Archae - 55; Bacteria - 1268; Metazoa - 812; Fungi - 224; Plants - 715; Viruses - 5; Other Eukaryotes - 512 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","8.59e-04 ","7/32 (21.9%) ","580/30324 (1.9%) ","AT3G47480 GGP1 CHS1 AT1G08050 AT3G51450 AIG2 LACS3"," "]
["AT5G52740","AT5G52740.1","Copper transport protein family; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT5G52760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051704 multi-organism process ","P ","9.42e-04 ","11/32 (34.4%) ","1905/30324 (6.3%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AT3G51450 AIG2 RABA1e RLP23 LACS3 AT5G52740 ASB1"," "]
["AT5G44990","AT5G44990.1","Glutathione S-transferase family protein; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 2474 Blast hits to 2474 proteins in 819 species: Archae - 30; Bacteria - 1545; Metazoa - 25; Fungi - 237; Plants - 128; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035556 intracellular signal transduction ","P ","1.47e-03 ","6/32 (18.8%) ","400/30324 (1.3%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RLP23"," "]
["AT1G35710","AT1G35710.1","Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","1.56e-03 ","8/32 (25.0%) ","914/30324 (3.0%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 AT5G52740"," "]
["AT5G12340","AT5G12340.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006955 immune response ","P ","1.64e-03 ","8/32 (25.0%) ","920/30324 (3.0%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 AT5G52740"," "]
["AT1G17610","AT1G17610.1","Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT5G40090.1); Has 6872 Blast hits to 6811 proteins in 238 species: Archae - 0; Bacteria - 42; Metazoa - 2; Fungi - 5; Plants - 6813; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","3.42e-03 ","5/32 (15.6%) ","264/30324 (0.9%) ","AT3G47480 CHS1 AT1G08050 AIG2 RLP23"," "]
["AT5G45840","AT5G45840.2","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G18640.1).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","3.81e-03 ","8/32 (25.0%) ","1032/30324 (3.4%) ","AT1G35710 AT3G47480 CHS1 AT1G08050 AIG2 RABA1e RLP23 AT5G52740"," "]
["AT3G47480","AT3G47480.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G39670.1); Has 10704 Blast hits to 7592 proteins in 1081 species: Archae - 0; Bacteria - 18; Metazoa - 4225; Fungi - 2180; Plants - 2830; Viruses - 0; Other Eukaryotes - 1451 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031348 negative regulation of defense response ","P ","4.40e-03 ","5/32 (15.6%) ","278/30324 (0.9%) ","AT3G47480 CHS1 AT1G08050 AIG2 RLP23"," "]
["AT3G30840","AT3G30840.1","unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016053 organic acid biosynthetic process ","P ","4.79e-03 ","8/32 (25.0%) ","1065/30324 (3.5%) ","AT3G47480 GGP1 CHS1 AT1G08050 AT3G51450 AIG2 LACS3 ASB1"," "]
["AT3G51450","AT3G51450.1","Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51430.1); Has 1424 Blast hits to 1412 proteins in 332 species: Archae - 38; Bacteria - 499; Metazoa - 223; Fungi - 14; Plants - 451; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).","protein_coding",null,null," ","GO:0046394 carboxylic acid biosynthetic process ","P ","4.79e-03 ","8/32 (25.0%) ","1065/30324 (3.5%) ","AT3G47480 GGP1 CHS1 AT1G08050 AT3G51450 AIG2 LACS3 ASB1"," "]
["AT5G42830","AT5G42830.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G41800","AT2G41800.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT2G41810.1); Has 301 Blast hits to 298 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT2G04515","AT2G04515.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G33720","AT1G33720.1","member of CYP76C","protein_coding","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 6 (CYP76C6)","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 6 (CYP76C6)"," ",{"$nulls":6}," "]
["AT1G25220","AT1G25220.2","Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2).","protein_coding","ANTHRANILATE SYNTHASE BETA SUBUNIT 1 (ASB1)","ANTHRANILATE SYNTHASE BETA SUBUNIT 1 (ASB1)"," ",{"$nulls":6}," "]
["AT3G28930","AT3G28930.1","avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2","protein_coding","AVRRPT2-INDUCED GENE 2 (AIG2)","AVRRPT2-INDUCED GENE 2 (AIG2)"," ",{"$nulls":6}," "]
["AT4G22592","AT4G22592.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF27 represents a conserved upstream opening reading frame relative to major ORF AT4G22590.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 27 (CPuORF27)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 27 (CPuORF27)"," ",{"$nulls":6}," "]
["AT4G30530","AT4G30530.1","Encodes a gamma-glutamyl peptidase, outside the GGT family, that can hydrolyze gamma-glutamyl peptide bonds.","protein_coding","GAMMA-GLUTAMYL PEPTIDASE 1 (GGP1)","GAMMA-GLUTAMYL PEPTIDASE 1 (GGP1)"," ",{"$nulls":6}," "]
["AT1G64400","AT1G64400.1","long-chain acyl-CoA synthetase 3 (LACS3); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G23850.1); Has 56096 Blast hits to 52077 proteins in 3262 species: Archae - 1018; Bacteria - 35853; Metazoa - 2423; Fungi - 1951; Plants - 2073; Viruses - 1; Other Eukaryotes - 12777 (source: NCBI BLink).","protein_coding","LONG-CHAIN ACYL-COA SYNTHETASE 3 (LACS3)","LONG-CHAIN ACYL-COA SYNTHETASE 3 (LACS3)"," ",{"$nulls":6}," "]
["AT1G34180","AT1G34180.2","NAC domain containing protein 16 (NAC016); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 17 (TAIR:AT1G34190.1); Has 2852 Blast hits to 2834 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2852; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","NAC DOMAIN CONTAINING PROTEIN 16 (NAC016)","NAC DOMAIN CONTAINING PROTEIN 16 (anac016);NAC DOMAIN CONTAINING PROTEIN 16 (NAC016)"," ",{"$nulls":6}," "]
["AT4G18430","AT4G18430.1","RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).","protein_coding","RAB GTPASE HOMOLOG A1E (RABA1e)","RAB GTPASE HOMOLOG A1E (RABA1e);RAB GTPASE HOMOLOG A1E (AtRABA1e)"," ",{"$nulls":6}," "]
["AT2G32680","AT2G32680.1","receptor like protein 23 (RLP23); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 24 (TAIR:AT2G33020.1); Has 122044 Blast hits to 32861 proteins in 1177 species: Archae - 60; Bacteria - 10426; Metazoa - 30931; Fungi - 1442; Plants - 70180; Viruses - 48; Other Eukaryotes - 8957 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 23 (RLP23)","RECEPTOR LIKE PROTEIN 23 (RLP23);RECEPTOR LIKE PROTEIN 23 (AtRLP23)"," ",{"$nulls":6}," "]
["AT3G11080","AT3G11080.1","receptor like protein 35 (RLP35); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 34 (TAIR:AT3G11010.1); Has 143109 Blast hits to 35332 proteins in 1251 species: Archae - 53; Bacteria - 12845; Metazoa - 35908; Fungi - 1531; Plants - 81557; Viruses - 21; Other Eukaryotes - 11194 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 35 (RLP35)","RECEPTOR LIKE PROTEIN 35 (RLP35);RECEPTOR LIKE PROTEIN 35 (AtRLP35)"," ",{"$nulls":6}," "]
["AT4G22590","AT4G22590.1","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G12430.1); Has 2353 Blast hits to 2348 proteins in 847 species: Archae - 42; Bacteria - 1327; Metazoa - 222; Fungi - 153; Plants - 482; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).","protein_coding","TREHALOSE-6-PHOSPHATE PHOSPHATASE G (TPPG)","TREHALOSE-6-PHOSPHATE PHOSPHATASE G (TPPG)"," ",{"$nulls":6}," "]
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{"sheet":"12","index":12,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT1G13750","AT1G13750.1","Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT4G08780","AT4G08780.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: vacuole; EXPRESSED IN: embryo, hypocotyl, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G08770.1); Has 4369 Blast hits to 4341 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 39; Plants - 4275; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G21525","AT1G21525.1","pseudogene of unknown protein","pseudogene",null,null," ","GO:0051707 response to other organism ","P ","1.13e-15 ","23/45 (51.1%) ","1535/30324 (5.1%) ","CRK7 WRKY38 RLP41 CRK36 UGT76B1 AT1G19320 LTI30 AT5G09290 WRKY51 PR5 AT3G57460 FMO1 SAG13 PBS3 BG3 AT1G13750 OPR3 COBL5 IRT1 Prx37 CYP71A13 AT4G10500 ECS1"," "]
["AT3G57460","AT3G57460.1","catalytics;metal ion binding; FUNCTIONS IN: catalytic activity, metal ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.1); Has 1493 Blast hits to 898 proteins in 288 species: Archae - 0; Bacteria - 451; Metazoa - 456; Fungi - 242; Plants - 223; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009607 response to biotic stimulus ","P ","1.15e-15 ","23/45 (51.1%) ","1536/30324 (5.1%) ","CRK7 WRKY38 RLP41 CRK36 UGT76B1 AT1G19320 LTI30 AT5G09290 WRKY51 PR5 AT3G57460 FMO1 SAG13 PBS3 BG3 AT1G13750 OPR3 COBL5 IRT1 Prx37 CYP71A13 AT4G10500 ECS1"," "]
["AT4G01390","AT4G01390.1","TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT4G00780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","8.84e-15 ","31/45 (68.9%) ","4028/30324 (13.3%) ","CRK7 WRKY38 RLP41 BGLU36 CRK36 UGT76B1 LTI30 AT5G09290 WRKY51 PP2-A8 BGLU35 PR5 AT3G57460 FMO1 SAG13 PBS3 RLP39 BG3 AT1G13750 IRT2 OPR3 COBL5 IRT1 Prx37 CYP71A13 AT4G10500 ECS1 AT1G06620 BGLU34 AOC1 AT3G01190"," "]
["AT1G19320","AT1G19320.1","Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1611 Blast hits to 1588 proteins in 180 species: Archae - 0; Bacteria - 48; Metazoa - 52; Fungi - 78; Plants - 1416; Viruses - 5; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","9.28e-14 ","36/45 (80.0%) ","6619/30324 (21.8%) ","CRK7 WRKY38 RLP41 BGLU36 CRK36 UGT76B1 AT1G19320 LTI30 AT5G09290 WRKY51 PP2-A8 BGLU35 PROPEP4 PR5 AT3G57460 FMO1 SAG13 PBS3 RLP39 BG3 AT1G13750 IRT2 RLP40 OPR3 COBL5 IRT1 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 AT1G06620 BGLU34 AOC1 AT3G01190 RLP25"," "]
["AT2G39420","AT2G39420.1","alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","1.21e-13 ","22/45 (48.9%) ","1667/30324 (5.5%) ","CRK7 WRKY38 RLP41 CRK36 UGT76B1 LTI30 AT5G09290 WRKY51 PP2-A8 PR5 AT3G57460 FMO1 SAG13 PBS3 RLP39 BG3 AT1G13750 COBL5 Prx37 CYP71A13 AT4G10500 ECS1"," "]
["AT3G01190","AT3G01190.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G15180.1); Has 4151 Blast hits to 4125 proteins in 211 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 32; Plants - 4087; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051704 multi-organism process ","P ","1.28e-13 ","23/45 (51.1%) ","1905/30324 (6.3%) ","CRK7 WRKY38 RLP41 CRK36 UGT76B1 AT1G19320 LTI30 AT5G09290 WRKY51 PR5 AT3G57460 FMO1 SAG13 PBS3 BG3 AT1G13750 OPR3 COBL5 IRT1 Prx37 CYP71A13 AT4G10500 ECS1"," "]
["AT4G10500","AT4G10500.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009814 defense response, incompatible interaction ","P ","1.66e-12 ","15/45 (33.3%) ","579/30324 (1.9%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 PR5 AT3G57460 FMO1 PBS3 BG3 AT1G13750 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT5G41300","AT5G41300.1","Receptor-like protein kinase-related family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT5G41290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","1.70e-12 ","15/45 (33.3%) ","580/30324 (1.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT5G19110","AT5G19110.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, leaf apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009627 systemic acquired resistance ","P ","1.82e-12 ","14/45 (31.1%) ","460/30324 (1.5%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 PR5 AT3G57460 FMO1 PBS3 BG3 AT1G13750 COBL5 CYP71A13 AT4G10500"," "]
["AT1G06620","AT1G06620.1","encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase","protein_coding",null,null," ","GO:0009697 salicylic acid biosynthetic process ","P ","6.66e-12 ","11/45 (24.4%) ","210/30324 (0.7%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT4G25070","AT4G25070.2","unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009696 salicylic acid metabolic process ","P ","1.29e-11 ","11/45 (24.4%) ","223/30324 (0.7%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT1G21245","AT1G21245.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 18774 Blast hits to 18543 proteins in 473 species: Archae - 0; Bacteria - 447; Metazoa - 261; Fungi - 0; Plants - 17989; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042537 benzene-containing compound metabolic process ","P ","6.98e-11 ","11/45 (24.4%) ","260/30324 (0.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT5G09290","AT5G09290.1","Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 10680 Blast hits to 10676 proteins in 1898 species: Archae - 61; Bacteria - 6716; Metazoa - 401; Fungi - 268; Plants - 330; Viruses - 0; Other Eukaryotes - 2904 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","1.22e-09 ","15/45 (33.3%) ","914/30324 (3.0%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 PR5 AT3G57460 FMO1 PBS3 BG3 AT1G13750 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT1G31580","AT1G31580.1","Encodes cell wall protein.  ECS1 is not a Xcc750 resistance gene, but the genetic data indicate that ECS1 is linked to a locus influencing resistance to Xcc750.","protein_coding"," (ECS1)"," (ECS1); (CXC750)"," ","GO:0006955 immune response ","P ","1.34e-09 ","15/45 (33.3%) ","920/30324 (3.0%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 PR5 AT3G57460 FMO1 PBS3 BG3 AT1G13750 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT3G57240","AT3G57240.1","encodes a member of glycosyl hydrolase family 17","protein_coding","BETA-1,3-GLUCANASE 3 (BG3)","BETA-1,3-GLUCANASE 3 (BG3)"," ","GO:0050832 defense response to fungus ","P ","4.67e-09 ","11/45 (24.4%) ","383/30324 (1.3%) ","WRKY38 CRK36 UGT76B1 LTI30 WRKY51 PR5 FMO1 PBS3 BG3 COBL5 CYP71A13"," "]
["AT2G43570","AT2G43570.1","chitinase, putative (CHI); FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35; Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes - 124 (source: NCBI BLink).","protein_coding","CHITINASE, PUTATIVE (CHI)","CHITINASE, PUTATIVE (CHI)"," ","GO:0002376 immune system process ","P ","6.81e-09 ","15/45 (33.3%) ","1032/30324 (3.4%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 PR5 AT3G57460 FMO1 PBS3 BG3 AT1G13750 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT3G25760","AT3G25760.1","encodes allene oxide cyclase.  One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway.","protein_coding","ALLENE OXIDE CYCLASE 1 (AOC1)","EARLY-RESPONSIVE TO DEHYDRATION 12 (ERD12);ALLENE OXIDE CYCLASE 1 (AOC1)"," ","GO:0016053 organic acid biosynthetic process ","P ","1.06e-08 ","15/45 (33.3%) ","1065/30324 (3.5%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT5G13320","AT5G13320.1","Encodes an enzyme capable of conjugating amino acids to 4-substituted benzoates. 4-HBA (4-hydroxybenzoic acid) and pABA (4-aminobenzoate) may be targets of the enzyme in Arabidopsis, leading to the production of pABA-Glu, 4HBA-Glu, or other related compounds. This enzyme is involved in disease-resistance signaling. It is required for the accumulation of salicylic acid, activation of defense responses, and resistance to Pseudomonas syringae. Salicylic acid can decrease this enzyme's activity in vitro and may act as a competitive inhibitor. Expression of PBS3/GH3.12 can be detected in cotyledons, true leaves, hypocotyls, and occasionally in some parts of roots from 10-day-old seedlings.  No expression has been detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants.","protein_coding","AVRPPHB SUSCEPTIBLE 3 (PBS3)","GRETCHEN HAGEN 3.12 (GH3.12); (ATGH3.12);HOPW1-1-INTERACTING 3 (WIN3);GH3-LIKE DEFENSE GENE 1 (GDG1);AVRPPHB SUSCEPTIBLE 3 (PBS3)"," ","GO:0046394 carboxylic acid biosynthetic process ","P ","1.06e-08 ","15/45 (33.3%) ","1065/30324 (3.5%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT1G47600","AT1G47600.1","Encodes a myrosinase. Over-expression led to a glucosinolate profile change.","protein_coding","BETA GLUCOSIDASE 34 (BGLU34)","BETA GLUCOSIDASE 34 (BGLU34);THIOGLUCOSIDE GLUCOHYDROLASE 4 (TGG4)"," ","GO:0009620 response to fungus ","P ","1.38e-08 ","12/45 (26.7%) ","560/30324 (1.8%) ","WRKY38 CRK36 UGT76B1 LTI30 WRKY51 PR5 FMO1 PBS3 BG3 OPR3 COBL5 CYP71A13"," "]
["AT1G51470","AT1G51470.1","Encodes a myrosinase.","protein_coding","BETA GLUCOSIDASE 35 (BGLU35)","THIOGLUCOSIDE GLUCOHYDROLASE 5 (TGG5);BETA GLUCOSIDASE 35 (BGLU35)"," ","GO:0032787 monocarboxylic acid metabolic process ","P ","4.26e-08 ","15/45 (33.3%) ","1176/30324 (3.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT1G51490","AT1G51490.1","beta glucosidase 36 (BGLU36); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 34 (TAIR:AT1G47600.2); Has 11071 Blast hits to 10643 proteins in 1459 species: Archae - 141; Bacteria - 7659; Metazoa - 719; Fungi - 205; Plants - 1418; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink).","protein_coding","BETA GLUCOSIDASE 36 (BGLU36)","BETA GLUCOSIDASE 36 (BGLU36)"," ","GO:0009753 response to jasmonic acid stimulus ","P ","5.44e-08 ","11/45 (24.4%) ","482/30324 (1.6%) ","WRKY38 CRK36 WRKY51 PROPEP4 PR5 PBS3 BG3 OPR3 NATA1 CYP71A13 AT1G06620"," "]
["AT5G60950","AT5G60950.1","COBRA-like protein 5 precursor (COBL5); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","COBRA-LIKE PROTEIN 5 PRECURSOR (COBL5)","COBRA-LIKE PROTEIN 5 PRECURSOR (COBL5)"," ","GO:0007154 cell communication ","P ","1.70e-07 ","18/45 (40.0%) ","2073/30324 (6.8%) ","WRKY38 RLP41 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 RLP39 BG3 IRT2 RLP40 OPR3 IRT1 CYP71A13 AT1G06620 AT3G01190 RLP25"," "]
["AT4G04490","AT4G04490.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 36 (CRK36)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 36 (CRK36)"," ","GO:0009867 jasmonic acid mediated signaling pathway ","P ","2.46e-07 ","9/45 (20.0%) ","292/30324 (1.0%) ","WRKY38 CRK36 WRKY51 PR5 PBS3 BG3 OPR3 CYP71A13 AT1G06620"," "]
["AT4G23150","AT4G23150.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 7 (CRK7)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 7 (CRK7)"," ","GO:0071395 cellular response to jasmonic acid stimulus ","P ","2.46e-07 ","9/45 (20.0%) ","292/30324 (1.0%) ","WRKY38 CRK36 WRKY51 PR5 PBS3 BG3 OPR3 CYP71A13 AT1G06620"," "]
["AT2G30770","AT2G30770.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 13 (CYP71A13)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 13 (CYP71A13)"," ","GO:0007165 signal transduction ","P ","3.55e-07 ","16/45 (35.6%) ","1618/30324 (5.3%) ","WRKY38 RLP41 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 RLP39 BG3 RLP40 OPR3 IRT1 CYP71A13 AT1G06620 RLP25"," "]
["AT5G09980","AT5G09980.1","elicitor peptide 4 precursor (PROPEP4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to jasmonic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","ELICITOR PEPTIDE 4 PRECURSOR (PROPEP4)","ELICITOR PEPTIDE 4 PRECURSOR (PROPEP4)"," ","GO:1901617 organic hydroxy compound biosynthetic process ","P ","3.70e-07 ","11/45 (24.4%) ","578/30324 (1.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT1G19250","AT1G19250.1","FMO1 is required for full expression of TIR-NB-LRR?conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.","protein_coding","FLAVIN-DEPENDENT MONOOXYGENASE 1 (FMO1)","FLAVIN-DEPENDENT MONOOXYGENASE 1 (FMO1)"," ","GO:0044283 small molecule biosynthetic process ","P ","4.20e-07 ","15/45 (33.3%) ","1387/30324 (4.6%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT5G02780","AT5G02780.1","Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro.","protein_coding","GLUTATHIONE TRANSFERASE LAMBDA 1 (GSTL1)","GLUTATHIONE TRANSFERASE LAMBDA 1 (GSTL1)"," ","GO:0044700 single organism signaling ","P ","8.11e-07 ","16/45 (35.6%) ","1713/30324 (5.6%) ","WRKY38 RLP41 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 RLP39 BG3 RLP40 OPR3 IRT1 CYP71A13 AT1G06620 RLP25"," "]
["AT4G19680","AT4G19680.2","encodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone.","protein_coding","IRON REGULATED TRANSPORTER 2 (IRT2)","IRON REGULATED TRANSPORTER 2 (IRT2)"," ","GO:0023052 signaling ","P ","8.18e-07 ","16/45 (35.6%) ","1714/30324 (5.7%) ","WRKY38 RLP41 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 RLP39 BG3 RLP40 OPR3 IRT1 CYP71A13 AT1G06620 RLP25"," "]
["AT4G19690","AT4G19690.2","The gene encodes Fe2+ transporter protein. It is a member of the Zrt/Irt-like protein (ZIP) family of transporters. AtIRT1 has broad specificity for divalent heavy metals, mediating the transport of zinc, manganese, cobalt and cadmium under Fe-deficient conditions. IRT1 is monoubiquitinated to promote endocytic trafficking.","protein_coding","IRON-REGULATED TRANSPORTER 1 (IRT1)","IRON-REGULATED TRANSPORTER 1 (IRT1)"," ","GO:0019752 carboxylic acid metabolic process ","P ","1.41e-06 ","16/45 (35.6%) ","1780/30324 (5.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT3G50970","AT3G50970.1","Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments.  LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid.","protein_coding","LOW TEMPERATURE-INDUCED 30 (LTI30)"," (XERO2);LOW TEMPERATURE-INDUCED 30 (LTI30)"," ","GO:0043436 oxoacid metabolic process ","P ","1.58e-06 ","16/45 (35.6%) ","1794/30324 (5.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT2G39030","AT2G39030.1","Encodes a protein that acts as an ornithine N-delta-acetyltransferase, leading to the formation of N-delta-actetylornithine. This compound is likely used in plant defense and levels of it are increased in Arabidopsis plants in response to MeJA and ABA.","protein_coding","N-ACETYLTRANSFERASE ACTIVITY 1 (NATA1)","N-ACETYLTRANSFERASE ACTIVITY 1 (NATA1)"," ","GO:0006082 organic acid metabolic process ","P ","1.59e-06 ","16/45 (35.6%) ","1795/30324 (5.9%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT2G06050","AT2G06050.2","Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.","protein_coding","OXOPHYTODIENOATE-REDUCTASE 3 (OPR3)","OXOPHYTODIENOATE-REDUCTASE 3 (OPR3); (AtOPR3)"," ","GO:0044711 single-organism biosynthetic process ","P ","2.68e-06 ","15/45 (33.3%) ","1589/30324 (5.2%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 CYP71A13 AT4G10500 ECS1 AOC1"," "]
["AT1G75040","AT1G75040.1","Thaumatin-like protein involved in response to pathogens.  mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.","protein_coding","PATHOGENESIS-RELATED GENE 5 (PR5)"," (PR-5);PATHOGENESIS-RELATED GENE 5 (PR5)"," ","GO:0051716 cellular response to stimulus ","P ","3.04e-06 ","19/45 (42.2%) ","2811/30324 (9.3%) ","CRK7 WRKY38 RLP41 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 RLP39 BG3 IRT2 RLP40 OPR3 IRT1 CYP71A13 AT1G06620 AT3G01190 RLP25"," "]
["AT4G08770","AT4G08770.1","Encodes a putative apoplastic peroxidase Prx37.  Primarily expressed in the vascular bundles.  Overexpression renders a dwarf phenotype with smaller plants and delayed development. Plants overexpressing Prx37 also shows an increase in the amount of esterified phenolic material associated with their walls.","protein_coding","PEROXIDASE 37 (Prx37)","PEROXIDASE 37 (Prx37)"," ","GO:0042742 defense response to bacterium ","P ","5.07e-06 ","9/45 (20.0%) ","413/30324 (1.4%) ","WRKY38 WRKY51 PR5 FMO1 PBS3 BG3 Prx37 CYP71A13 ECS1"," "]
["AT5G45070","AT5G45070.1","phloem protein 2-A8 (PP2-A8); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2-A6 (TAIR:AT5G45080.1); Has 1773 Blast hits to 1692 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1773; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","PHLOEM PROTEIN 2-A8 (PP2-A8)","PHLOEM PROTEIN 2-A8 (PP2-A8);PHLOEM PROTEIN 2-A8 (AtPP2-A8)"," ","GO:1901615 organic hydroxy compound metabolic process ","P ","6.36e-06 ","11/45 (24.4%) ","760/30324 (2.5%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 COBL5 CYP71A13 AT4G10500 ECS1"," "]
["AT1G01680","AT1G01680.1","plant U-box 54 (PUB54); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G01660.1); Has 2251 Blast hits to 2122 proteins in 140 species: Archae - 0; Bacteria - 22; Metazoa - 203; Fungi - 25; Plants - 1809; Viruses - 3; Other Eukaryotes - 189 (source: NCBI BLink).","protein_coding","PLANT U-BOX 54 (PUB54)","PLANT U-BOX 54 (PUB54);PLANT U-BOX 54 (ATPUB54)"," ","GO:0009617 response to bacterium ","P ","1.02e-05 ","10/45 (22.2%) ","610/30324 (2.0%) ","WRKY38 WRKY51 PR5 FMO1 PBS3 BG3 IRT1 Prx37 CYP71A13 ECS1"," "]
["AT2G33030","AT2G33030.1","receptor like protein 25 (RLP25); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 20 (TAIR:AT2G25440.1); Has 65632 Blast hits to 12596 proteins in 534 species: Archae - 7; Bacteria - 649; Metazoa - 578; Fungi - 90; Plants - 61765; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 25 (RLP25)","RECEPTOR LIKE PROTEIN 25 (RLP25);RECEPTOR LIKE PROTEIN 25 (AtRLP25)"," ","GO:1901700 response to oxygen-containing compound ","P ","1.95e-05 ","17/45 (37.8%) ","2459/30324 (8.1%) ","WRKY38 CRK36 LTI30 AT5G09290 WRKY51 PROPEP4 PR5 PBS3 BG3 IRT2 OPR3 IRT1 NATA1 CYP71A13 AT1G06620 AOC1 AT3G01190"," "]
["AT3G24900","AT3G24900.1","receptor like protein 39 (RLP39); INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 41 (TAIR:AT3G25010.1); Has 100467 Blast hits to 28160 proteins in 1059 species: Archae - 45; Bacteria - 6030; Metazoa - 21147; Fungi - 1159; Plants - 64382; Viruses - 14; Other Eukaryotes - 7690 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 39 (RLP39)","RECEPTOR LIKE PROTEIN 39 (RLP39);RECEPTOR LIKE PROTEIN 39 (AtRLP39)"," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","7.15e-05 ","7/45 (15.6%) ","264/30324 (0.9%) ","WRKY38 CRK36 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
["AT3G24982","AT3G24982.1","receptor like protein 40 (RLP40); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 42 (TAIR:AT3G25020.1); Has 99455 Blast hits to 28572 proteins in 1045 species: Archae - 41; Bacteria - 5981; Metazoa - 21246; Fungi - 1128; Plants - 63748; Viruses - 31; Other Eukaryotes - 7280 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 40 (RLP40)","RECEPTOR LIKE PROTEIN 40 (RLP40);RECEPTOR LIKE PROTEIN 40 (ATRLP40)"," ","GO:1901701 cellular response to oxygen-containing compound ","P ","7.51e-05 ","11/45 (24.4%) ","969/30324 (3.2%) ","WRKY38 CRK36 AT5G09290 WRKY51 PR5 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
["AT3G25010","AT3G25010.1","receptor like protein 41 (RLP41); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 40 (TAIR:AT3G24982.1); Has 100338 Blast hits to 28106 proteins in 1068 species: Archae - 55; Bacteria - 6779; Metazoa - 21043; Fungi - 1251; Plants - 63659; Viruses - 32; Other Eukaryotes - 7519 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 41 (RLP41)","RECEPTOR LIKE PROTEIN 41 (RLP41);RECEPTOR LIKE PROTEIN 41 (AtRLP41)"," ","GO:0009755 hormone-mediated signaling pathway ","P ","1.20e-04 ","10/45 (22.2%) ","795/30324 (2.6%) ","WRKY38 CRK36 WRKY51 PR5 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
["AT2G29350","AT2G29350.1","senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase","protein_coding","SENESCENCE-ASSOCIATED GENE 13 (SAG13)","SENESCENCE-ASSOCIATED GENE 13 (SAG13)"," ","GO:0032870 cellular response to hormone stimulus ","P ","1.87e-04 ","10/45 (22.2%) ","834/30324 (2.8%) ","WRKY38 CRK36 WRKY51 PR5 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
["AT3G11340","AT3G11340.1","Encodes a glucosyltransferase that conjugates isoleucic acid and modulates plant defense and senescence.","protein_coding","UDP-DEPENDENT GLYCOSYLTRANSFERASE 76B1 (UGT76B1)","UDP-DEPENDENT GLYCOSYLTRANSFERASE 76B1 (UGT76B1)"," ","GO:0071495 cellular response to endogenous stimulus ","P ","1.97e-04 ","10/45 (22.2%) ","839/30324 (2.8%) ","WRKY38 CRK36 WRKY51 PR5 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
["AT5G22570","AT5G22570.1","member of WRKY Transcription Factor; Group III","protein_coding","WRKY DNA-BINDING PROTEIN 38 (WRKY38)","ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38 (ATWRKY38);WRKY DNA-BINDING PROTEIN 38 (WRKY38)"," ","GO:0010310 regulation of hydrogen peroxide metabolic process ","P ","2.08e-04 ","6/45 (13.3%) ","188/30324 (0.6%) ","WRKY38 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
["AT5G64810","AT5G64810.1","member of WRKY Transcription Factor; Group II-c.  Involved in jasmonic acid inducible defense responses.","protein_coding","WRKY DNA-BINDING PROTEIN 51 (WRKY51)","WRKY DNA-BINDING PROTEIN 51 (WRKY51);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 51 (ATWRKY51)"," ","GO:0044281 small molecule metabolic process ","P ","3.03e-04 ","16/45 (35.6%) ","2614/30324 (8.6%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 AOC1"," "]
[{"$nulls":6}," ","GO:0009595 detection of biotic stimulus ","P ","3.10e-04 ","5/45 (11.1%) ","106/30324 (0.3%) ","WRKY38 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0009725 response to hormone stimulus ","P ","3.22e-04 ","13/45 (28.9%) ","1662/30324 (5.5%) ","WRKY38 CRK36 LTI30 WRKY51 PROPEP4 PR5 PBS3 BG3 OPR3 IRT1 NATA1 CYP71A13 AT1G06620"," "]
[{"$nulls":6}," ","GO:2000377 regulation of reactive oxygen species metabolic process ","P ","3.37e-04 ","6/45 (13.3%) ","204/30324 (0.7%) ","WRKY38 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0034976 response to endoplasmic reticulum stress ","P ","5.06e-04 ","7/45 (15.6%) ","353/30324 (1.2%) ","CRK7 WRKY38 RLP41 CRK36 PR5 PBS3 BG3"," "]
[{"$nulls":6}," ","GO:0070887 cellular response to chemical stimulus ","P ","5.20e-04 ","12/45 (26.7%) ","1445/30324 (4.8%) ","WRKY38 CRK36 AT5G09290 WRKY51 PR5 FMO1 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
[{"$nulls":6}," ","GO:0000165 MAPK cascade ","P ","5.51e-04 ","6/45 (13.3%) ","222/30324 (0.7%) ","WRKY38 CRK36 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0007243 intracellular protein kinase cascade ","P ","5.81e-04 ","6/45 (13.3%) ","224/30324 (0.7%) ","WRKY38 CRK36 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0033554 cellular response to stress ","P ","6.41e-04 ","12/45 (26.7%) ","1474/30324 (4.9%) ","CRK7 WRKY38 RLP41 CRK36 PR5 FMO1 PBS3 BG3 IRT2 IRT1 CYP71A13 AT3G01190"," "]
[{"$nulls":6}," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","6.55e-04 ","7/45 (15.6%) ","367/30324 (1.2%) ","WRKY38 CRK36 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","6.79e-04 ","7/45 (15.6%) ","369/30324 (1.2%) ","WRKY38 CRK36 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0031347 regulation of defense response ","P ","7.83e-04 ","8/45 (17.8%) ","549/30324 (1.8%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 AT1G13750 CYP71A13"," "]
[{"$nulls":6}," ","GO:0071310 cellular response to organic substance ","P ","1.01e-03 ","11/45 (24.4%) ","1261/30324 (4.2%) ","WRKY38 CRK36 AT5G09290 WRKY51 PR5 PBS3 BG3 OPR3 IRT1 CYP71A13 AT1G06620"," "]
[{"$nulls":6}," ","GO:0043900 regulation of multi-organism process ","P ","1.03e-03 ","5/45 (11.1%) ","135/30324 (0.4%) ","WRKY38 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0080134 regulation of response to stress ","P ","1.12e-03 ","8/45 (17.8%) ","576/30324 (1.9%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 AT1G13750 CYP71A13"," "]
[{"$nulls":6}," ","GO:1901698 response to nitrogen compound ","P ","1.23e-03 ","9/45 (20.0%) ","792/30324 (2.6%) ","WRKY38 CRK36 PR5 PBS3 BG3 IRT2 IRT1 CYP71A13 AT3G01190"," "]
[{"$nulls":6}," ","GO:0009719 response to endogenous stimulus ","P ","1.28e-03 ","13/45 (28.9%) ","1879/30324 (6.2%) ","WRKY38 CRK36 LTI30 WRKY51 PROPEP4 PR5 PBS3 BG3 OPR3 IRT1 NATA1 CYP71A13 AT1G06620"," "]
[{"$nulls":6}," ","GO:0009626 plant-type hypersensitive response ","P ","1.28e-03 ","7/45 (15.6%) ","406/30324 (1.3%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0034050 host programmed cell death induced by symbiont ","P ","1.30e-03 ","7/45 (15.6%) ","407/30324 (1.3%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0016045 detection of bacterium ","P ","1.46e-03 ","3/45 (6.7%) ","18/30324 (0.1%) ","WRKY38 PBS3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0051606 detection of stimulus ","P ","1.67e-03 ","5/45 (11.1%) ","149/30324 (0.5%) ","WRKY38 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0045088 regulation of innate immune response ","P ","1.73e-03 ","7/45 (15.6%) ","425/30324 (1.4%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0050776 regulation of immune response ","P ","1.78e-03 ","7/45 (15.6%) ","427/30324 (1.4%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0002682 regulation of immune system process ","P ","1.87e-03 ","7/45 (15.6%) ","430/30324 (1.4%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0042221 response to chemical stimulus ","P ","1.88e-03 ","18/45 (40.0%) ","3789/30324 (12.5%) ","WRKY38 CRK36 LTI30 AT5G09290 WRKY51 PROPEP4 PR5 FMO1 PBS3 BG3 IRT2 OPR3 IRT1 NATA1 CYP71A13 AT1G06620 AOC1 AT3G01190"," "]
[{"$nulls":6}," ","GO:0031348 negative regulation of defense response ","P ","2.03e-03 ","6/45 (13.3%) ","278/30324 (0.9%) ","WRKY38 CRK36 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0012501 programmed cell death ","P ","2.91e-03 ","7/45 (15.6%) ","460/30324 (1.5%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0009751 response to salicylic acid stimulus ","P ","4.22e-03 ","7/45 (15.6%) ","487/30324 (1.6%) ","WRKY38 CRK36 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0016265 death ","P ","5.55e-03 ","7/45 (15.6%) ","508/30324 (1.7%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0008219 cell death ","P ","5.55e-03 ","7/45 (15.6%) ","508/30324 (1.7%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0048583 regulation of response to stimulus ","P ","5.87e-03 ","8/45 (17.8%) ","722/30324 (2.4%) ","WRKY38 CRK36 PR5 FMO1 PBS3 BG3 AT1G13750 CYP71A13"," "]
[{"$nulls":6}," ","GO:0042743 hydrogen peroxide metabolic process ","P ","6.08e-03 ","6/45 (13.3%) ","337/30324 (1.1%) ","WRKY38 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ","GO:0044710 single-organism metabolic process ","P ","7.11e-03 ","17/45 (37.8%) ","3733/30324 (12.3%) ","CRK7 WRKY38 CRK36 PR5 AT3G57460 PBS3 BG3 AT1G13750 OPR3 COBL5 Prx37 NATA1 CYP71A13 AT4G10500 ECS1 BGLU34 AOC1"," "]
[{"$nulls":6}," ","GO:0071407 cellular response to organic cyclic compound ","P ","9.38e-03 ","7/45 (15.6%) ","551/30324 (1.8%) ","WRKY38 CRK36 AT5G09290 PR5 PBS3 BG3 CYP71A13"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," "," ",{"$nulls":5}," "]
[{"$nulls":6}," ","Molecular Function",{"$nulls":5}," "]
[{"$nulls":6}," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
[{"$nulls":6}," ","GO:0003824 catalytic activity ","F ","3.51e-03 ","24/45 (53.3%) ","6784/30324 (22.4%) ","AT4G08780 CRK7 RLP41 BGLU36 CRK36 UGT76B1 AT5G09290 BGLU35 CHI FMO1 SAG13 PBS3 AT2G39420 BG3 AT1G13750 OPR3 Prx37 NATA1 CYP71A13 AT4G10500 AT1G06620 BGLU34 AOC1 AT3G01190"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ","  ",{"$nulls":5}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G60690","AT3G60690.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G44830","AT1G44830.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.  Overexpression in cultured cells results in an increase in pectin deposition.","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G44800","AT2G44800.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 8435 Blast hits to 8385 proteins in 967 species: Archae - 0; Bacteria - 1060; Metazoa - 91; Fungi - 1008; Plants - 4904; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006865 amino acid transport ","P ","9.21e-03 ","5/37 (13.5%) ","264/30324 (0.9%) ","AT1G52200 PGIP1 AT2G27660 AT4G20860 AT5G48430"," "]
["AT5G48430","AT5G48430.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G01870","AT4G01870.1","tolB protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 6090 Blast hits to 4220 proteins in 1098 species: Archae - 42; Bacteria - 3414; Metazoa - 20; Fungi - 42; Plants - 120; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT3G55646","AT3G55646.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G60290","AT3G60290.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: response to karrikin, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G44800.1); Has 8462 Blast hits to 8411 proteins in 989 species: Archae - 0; Bacteria - 1081; Metazoa - 111; Fungi - 1027; Plants - 4887; Viruses - 0; Other Eukaryotes - 1356 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G30720","AT1G30720.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30730.1); Has 3969 Blast hits to 3939 proteins in 594 species: Archae - 30; Bacteria - 1573; Metazoa - 1; Fungi - 1535; Plants - 718; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G27660","AT2G27660.1","Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G44400.1); Has 12415 Blast hits to 4315 proteins in 441 species: Archae - 16; Bacteria - 8002; Metazoa - 1069; Fungi - 491; Plants - 2227; Viruses - 23; Other Eukaryotes - 587 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G68410","AT1G68410.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 5348 Blast hits to 5347 proteins in 441 species: Archae - 2; Bacteria - 344; Metazoa - 1196; Fungi - 481; Plants - 2242; Viruses - 4; Other Eukaryotes - 1079 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G08315","AT1G08315.1","ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT2G23140.2); Has 1129 Blast hits to 1121 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 8; Plants - 1079; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G03000","AT3G03000.1","Calmodulin like protein localized in the plant vacuolar compartment  with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G62860","AT5G62860.1","F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G32420.1); Has 451 Blast hits to 435 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 451; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G46690","AT3G46690.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G46680.1); Has 7788 Blast hits to 7728 proteins in 465 species: Archae - 0; Bacteria - 460; Metazoa - 2119; Fungi - 30; Plants - 5034; Viruses - 86; Other Eukaryotes - 59 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G63580","AT1G63580.1","Encodes a plasma membrane-localized protein with two DUF26 domains and a GPI anchor domain.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G10300","AT3G10300.3","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G04170.1); Has 38024 Blast hits to 21889 proteins in 1081 species: Archae - 4; Bacteria - 4124; Metazoa - 20808; Fungi - 4736; Plants - 4579; Viruses - 288; Other Eukaryotes - 3485 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G43863","AT3G43863.1","transposable element gene","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT1G05340","AT1G05340.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G04050","AT2G04050.1","MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, leaf whorl, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04070.1); Has 9243 Blast hits to 9147 proteins in 1877 species: Archae - 201; Bacteria - 6287; Metazoa - 147; Fungi - 326; Plants - 1316; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G52200","AT1G52200.1","PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18450.1); Has 632 Blast hits to 631 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 75; Plants - 516; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G21080","AT3G21080.1","ABC transporter-related; BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 247 Blast hits to 244 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 247; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G20860","AT4G20860.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G45180","AT1G45180.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G42940.1); Has 9233 Blast hits to 9191 proteins in 302 species: Archae - 0; Bacteria - 44; Metazoa - 2582; Fungi - 701; Plants - 4328; Viruses - 54; Other Eukaryotes - 1524 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G46370","AT3G46370.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 158526 Blast hits to 120263 proteins in 4504 species: Archae - 95; Bacteria - 12978; Metazoa - 44044; Fungi - 9573; Plants - 73487; Viruses - 375; Other Eukaryotes - 17974 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G72790","AT1G72790.1","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G57070.1); Has 16953 Blast hits to 10626 proteins in 654 species: Archae - 27; Bacteria - 1228; Metazoa - 7030; Fungi - 2381; Plants - 3856; Viruses - 536; Other Eukaryotes - 1895 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G08040","AT4G08040.1","encodes an aminotransferase that belongs to ACC synthase gene family structurally","protein_coding","1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 (ACS11)","1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 (ACS11)"," ",{"$nulls":6}," "]
["AT1G29970","AT1G29970.2","60S ribosomal protein L18A-1 (RPL18AA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18ae/LX (InterPro:IPR021138), Ribosomal protein L18ae (InterPro:IPR002670); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae/LX family protein (TAIR:AT1G29965.1); Has 869 Blast hits to 867 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 155; Plants - 265; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).","protein_coding","60S RIBOSOMAL PROTEIN L18A-1 (RPL18AA)","60S RIBOSOMAL PROTEIN L18A-1 (RPL18AA)"," ",{"$nulls":6}," "]
["AT4G26080","AT4G26080.1","Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.","protein_coding","ABA INSENSITIVE 1 (ABI1)"," (AtABI1);ABA INSENSITIVE 1 (ABI1)"," ",{"$nulls":6}," "]
["AT1G21910","AT1G21910.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 26 (DREB26)","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 26 (DREB26)"," ",{"$nulls":6}," "]
["AT1G31350","AT1G31350.1","KAR-UP F-box 1 (KUF1); CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 661 Blast hits to 661 proteins in 63 species: Archae - 0; Bacteria - 29; Metazoa - 81; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).","protein_coding","KAR-UP F-BOX 1 (KUF1)","KAR-UP F-BOX 1 (KUF1)"," ",{"$nulls":6}," "]
["AT1G65610","AT1G65610.1","KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).","protein_coding","KORRIGAN 2 (KOR2)","KORRIGAN 2 (KOR2);ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2 (ATGH9A2)"," ",{"$nulls":6}," "]
["AT3G07780","AT3G07780.1","Encodes a nuclear PHD finger protein that is functionally redundant with OBE2 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.","protein_coding","OBERON1 (OBE1)","OBERON1 (OBE1)"," ",{"$nulls":6}," "]
["AT5G06860","AT5G06860.1","Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection.","protein_coding","POLYGALACTURONASE INHIBITING PROTEIN 1 (PGIP1)","POLYGALACTURONASE INHIBITING PROTEIN 1 (PGIP1);POLYGALACTURONASE INHIBITING PROTEIN 1 (ATPGIP1)"," ",{"$nulls":6}," "]
["AT4G18210","AT4G18210.1","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","protein_coding","PURINE PERMEASE 10 (PUP10)","PURINE PERMEASE 10 (PUP10);PURINE PERMEASE 10 (ATPUP10)"," ",{"$nulls":6}," "]
["AT4G15800","AT4G15800.1","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis.  Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","protein_coding","RALF-LIKE 33 (RALFL33)","RALF-LIKE 33 (RALFL33)"," ",{"$nulls":6}," "]
["AT1G21450","AT1G21450.1","Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family.","protein_coding","SCARECROW-LIKE 1 (SCL1)","SCARECROW-LIKE 1 (SCL1)"," ",{"$nulls":6}," "]
["AT2G30360","AT2G30360.1","Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.","protein_coding","SOS3-INTERACTING PROTEIN 4 (SIP4)","CBL-INTERACTING PROTEIN KINASE 11 (CIPK11);PROTEIN KINASE SOS2-LIKE 5 (PKS5);SOS3-INTERACTING PROTEIN 4 (SIP4);SNF1-RELATED PROTEIN KINASE 3.22 (SNRK3.22)"," ",{"$nulls":6}," "]
["AT5G07100","AT5G07100.1","Encodes WRKY DNA-binding protein 26 (WRKY26).","protein_coding","WRKY DNA-BINDING PROTEIN 26 (WRKY26)","WRKY DNA-BINDING PROTEIN 26 (WRKY26)"," ",{"$nulls":6}," "]
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{"sheet":"14","index":14,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G53190","AT3G53190.1","Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 1735 Blast hits to 1728 proteins in 275 species: Archae - 0; Bacteria - 778; Metazoa - 0; Fungi - 236; Plants - 699; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G62110","AT1G62110.1","Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G62085.1); Has 1071 Blast hits to 876 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 0; Plants - 988; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G61990","AT1G61990.1","Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G61960.1); Has 813 Blast hits to 783 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 807; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009888 tissue development ","P ","1.23e-03 ","12/53 (22.6%) ","1268/30324 (4.2%) ","LAX2 BAT1 BGAL3 AT1G78060 CYC3B SERK1 LBD4 TBL36 CYCD1;1 EM1 PIN1 FLP"," "]
["AT3G15670","AT3G15670.1","Late embryogenesis abundant protein (LEA) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED DURING: dry seed stage; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT1G52690.2); Has 12897 Blast hits to 6829 proteins in 1482 species: Archae - 30; Bacteria - 6176; Metazoa - 1239; Fungi - 638; Plants - 1871; Viruses - 111; Other Eukaryotes - 2832 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G53070","AT1G53070.1","Legume lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Lectin (InterPro:IPR016363); BEST Arabidopsis thaliana protein match is: Legume lectin family protein (TAIR:AT1G53080.1); Has 1891 Blast hits to 1870 proteins in 117 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 1861; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT5G27140","AT5G27140.1","NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT5G27120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G36925","AT4G36925.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24945.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G52270","AT1G52270.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28310.1); Has 29 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G39180","AT5G39180.1","RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1507 Blast hits to 1499 proteins in 91 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 39; Plants - 1449; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G59670","AT3G59670.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G31910","AT4G31910.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G41040.1); Has 2584 Blast hits to 2554 proteins in 136 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 40; Plants - 2539; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G68230","AT1G68230.2","Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G05190","AT3G05190.1","D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 12987 Blast hits to 12984 proteins in 2156 species: Archae - 154; Bacteria - 7776; Metazoa - 19; Fungi - 96; Plants - 317; Viruses - 0; Other Eukaryotes - 4625 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G56540","AT3G56540.1","alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3496 Blast hits to 3462 proteins in 393 species: Archae - 0; Bacteria - 271; Metazoa - 619; Fungi - 840; Plants - 1342; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G45680","AT3G45680.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3869 Blast hits to 3768 proteins in 536 species: Archae - 0; Bacteria - 851; Metazoa - 459; Fungi - 223; Plants - 2137; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G80280","AT1G80280.1","alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7676 Blast hits to 7658 proteins in 1204 species: Archae - 71; Bacteria - 5735; Metazoa - 276; Fungi - 71; Plants - 550; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G24140","AT4G24140.1","alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G39850","AT2G39850.1","Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G46850.1); Has 4351 Blast hits to 3901 proteins in 675 species: Archae - 80; Bacteria - 1999; Metazoa - 45; Fungi - 97; Plants - 1948; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G70270","AT1G70270.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23965.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G16220","AT1G16220.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G79470","AT1G79470.1","Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G16350.1); Has 13395 Blast hits to 12591 proteins in 2701 species: Archae - 175; Bacteria - 7357; Metazoa - 460; Fungi - 182; Plants - 88; Viruses - 2; Other Eukaryotes - 5131 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G52170","AT3G52170.1","DNA binding; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G58210.4); Has 240 Blast hits to 221 proteins in 88 species: Archae - 6; Bacteria - 92; Metazoa - 40; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G65370","AT1G65370.1","TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT1G65150.2); Has 460 Blast hits to 456 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G54870","AT1G54870.1","ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G42960","AT2G42960.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59110.1); Has 122679 Blast hits to 121177 proteins in 4382 species: Archae - 116; Bacteria - 14606; Metazoa - 44944; Fungi - 10490; Plants - 33768; Viruses - 414; Other Eukaryotes - 18341 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G67105","AT1G67105.1","other RNA","other_rna",null,null," ",{"$nulls":6}," "]
["AT5G01870","AT5G01870.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the lipid transfer protein (PR-14) family with the following members:   At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G26680","AT5G26680.1","5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G01450","AT4G01450.2","nodulin MtN21-like transporter family protein","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G44490","AT5G44490.1","FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G22730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G78060","AT1G78060.1","Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G16730","AT2G16730.1","putative beta-galactosidase (BGAL13 gene)","protein_coding"," (BGAL13)","BETA-GALACTOSIDASE 13 (BGAL13); (BGAL13)"," ",{"$nulls":6}," "]
["AT3G52720","AT3G52720.1","Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast.  Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding, ER export, trafficking and activity of the protein.","protein_coding","ALPHA CARBONIC ANHYDRASE 1 (ACA1)","CARBONIC ANHYDRASE 1 (CAH1);ALPHA CARBONIC ANHYDRASE 1 (ACA1);A. THALIANA ALPHA CARBONIC ANHYDRASE 1 (ATACA1)"," ",{"$nulls":6}," "]
["AT3G21250","AT3G21250.2","member of MRP subfamily","protein_coding","ATP-BINDING CASSETTE C8 (ABCC8)","ATP-BINDING CASSETTE C8 (ABCC8);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6 (MRP6)"," ",{"$nulls":6}," "]
["AT4G36360","AT4G36360.1","putative beta-galactosidase (BGAL3 gene)","protein_coding","BETA-GALACTOSIDASE 3 (BGAL3)","BETA-GALACTOSIDASE 3 (BGAL3)"," ",{"$nulls":6}," "]
["AT1G70210","AT1G70210.1","Encodes a D-type cyclin that physically interacts with CDC2A.  Its expression is upregulated early during germination.","protein_coding","CYCLIN D1;1 (CYCD1;1)"," (ATCYCD1;1);CYCLIN D1;1 (CYCD1;1)"," ",{"$nulls":6}," "]
["AT2G34490","AT2G34490.1","Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze the conversion of both 24-<i>epi</i>-campesterol and &beta;-sitosterol to brassicasterol and stigmasterol, respectively, in the presence of NADPH.","protein_coding","CYTOCHROME P450, FAMILY 710, SUBFAMILY A, POLYPEPTIDE 2 (CYP710A2)","CYTOCHROME P450, FAMILY 710, SUBFAMILY A, POLYPEPTIDE 2 (CYP710A2)"," ",{"$nulls":6}," "]
["AT1G80710","AT1G80710.1","Encodes a WD-40 repeat family protein containing a DWD (DDB1 binding WD-40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1- Cul4?mediated protein degradation in drought response.","protein_coding","DROUGHT SENSITIVE 1 (DRS1)","DROUGHT SENSITIVE 1 (DRS1)"," ",{"$nulls":6}," "]
["AT2G28950","AT2G28950.1","Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","protein_coding","EXPANSIN A6 (EXPA6)","EXPANSIN A6 (EXPA6);EXPANSIN A6 (ATEXPA6);ARABIDOPSIS THALIANA TEXPANSIN 6 (ATEXP6); (ATHEXP ALPHA 1.8)"," ",{"$nulls":6}," "]
["AT1G14350","AT1G14350.1","Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells.  This phenotype is enhanced in double mutants with MYB88.","protein_coding","FOUR LIPS (FLP)","MYB DOMAIN PROTEIN 124 (AtMYB124);FOUR LIPS (FLP); (MYB124)"," ",{"$nulls":6}," "]
["AT1G60470","AT1G60470.1","Predicted to encode a galactinol synthase.","protein_coding","GALACTINOL SYNTHASE 4 (GolS4)","GALACTINOL SYNTHASE 4 (GolS4);GALACTINOL SYNTHASE 4 (AtGolS4)"," ",{"$nulls":6}," "]
["AT3G51810","AT3G51810.1","Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA.  The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.","protein_coding","LATE EMBRYOGENESIS ABUNDANT 1 (EM1)","ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1 (ATEM1);GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 (GEA1); (AT3);LATE EMBRYOGENESIS ABUNDANT 1 (EM1)"," ",{"$nulls":6}," "]
["AT2G21050","AT2G21050.1","Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers.  Required for the establishment of embryonic root cell organization.","protein_coding","LIKE AUXIN RESISTANT 2 (LAX2)","LIKE AUXIN RESISTANT 2 (LAX2)"," ",{"$nulls":6}," "]
["AT1G31320","AT1G31320.1","LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","LOB DOMAIN-CONTAINING PROTEIN 4 (LBD4)","LOB DOMAIN-CONTAINING PROTEIN 4 (LBD4)"," ",{"$nulls":6}," "]
["AT5G11300","AT5G11300.1","mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).","protein_coding","MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS (CYC3B)","CYCLIN A2;2 (CYCA2;2);MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS (CYC3B); (CYC2BAT)"," ",{"$nulls":6}," "]
["AT5G61420","AT5G61420.2","Encodes a nuclear localized member of the MYB transcription factor family. Involved in positive regulation of aliphatic glucosinolate biosynthesis.Expression is induced by touch, wounding and glucose.","protein_coding","MYB DOMAIN PROTEIN 28 (MYB28)","HIGH ALIPHATIC GLUCOSINOLATE 1 (HAG1);MYB DOMAIN PROTEIN 28 (MYB28)"," ",{"$nulls":6}," "]
["AT5G56080","AT5G56080.1","Encodes a protein with nicotianamine synthase activity. Its transcript levels rise in roots in response to zinc deficiency and rise in leaves in response to elevated levels of zinc.","protein_coding","NICOTIANAMINE SYNTHASE 2 (NAS2)","ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2 (ATNAS2);NICOTIANAMINE SYNTHASE 2 (NAS2)"," ",{"$nulls":6}," "]
["AT2G02020","AT2G02020.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).","protein_coding","PEPTIDE TRANSPORTER 4 (PTR4)","PEPTIDE TRANSPORTER 4 (PTR4); (AtPTR4)"," ",{"$nulls":6}," "]
["AT1G73590","AT1G73590.1","Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients.  Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem.  PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations.  In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex.  Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.","protein_coding","PIN-FORMED 1 (PIN1)","ARABIDOPSIS THALIANA PIN-FORMED 1 (ATPIN1);PIN-FORMED 1 (PIN1)"," ",{"$nulls":6}," "]
["AT4G18290","AT4G18290.1","Encodes KAT2, a member of the Shaker family potassium ion (K+) channel.  Critical to stomatal opening induced by blue light. Critical to circadian rhythm of stomatal opening. Involved in plant development in response to high light intensity. Under high light intensity, the mutant plant produced less biomass compared to the wild type. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","protein_coding","POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2 (KAT2)","POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2 (KAT2)"," ",{"$nulls":6}," "]
["AT1G34065","AT1G34065.1","S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink).","protein_coding","S-ADENOSYLMETHIONINE CARRIER 2 (SAMC2)","S-ADENOSYLMETHIONINE CARRIER 2 (SAMC2)"," ",{"$nulls":6}," "]
["AT5G54740","AT5G54740.1","seed storage albumin 5 (SESA5); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","SEED STORAGE ALBUMIN 5 (SESA5)","SEED STORAGE ALBUMIN 5 (SESA5)"," ",{"$nulls":6}," "]
["AT1G71830","AT1G71830.1","Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development  controlling male gametophyte production.  later","protein_coding","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (SERK1)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (SERK1);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (ATSERK1)"," ",{"$nulls":6}," "]
["AT1G09960","AT1G09960.1","low affinity (10mM) sucrose transporter in sieve elements (phloem)","protein_coding","SUCROSE TRANSPORTER 4 (SUT4)","SUCROSE TRANSPORTER 4 (SUT4);SUCROSE TRANSPORTER 4 (ATSUC4);SUCROSE TRANSPORTER 4 (SUC4);SUCROSE TRANSPORTER 4 (ATSUT4)"," ",{"$nulls":6}," "]
["AT3G54260","AT3G54260.1","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","protein_coding","TRICHOME BIREFRINGENCE-LIKE 36 (TBL36)","TRICHOME BIREFRINGENCE-LIKE 36 (TBL36)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G66080","AT5G66080.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT3G11580","AT3G11580.1","AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G06250.2); Has 1345 Blast hits to 1343 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1345; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G35510","AT5G35510.1","unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016265 death ","P ","1.96e-05 ","10/56 (17.9%) ","508/30324 (1.7%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 AT4G13820 EFR RLP46"," "]
["AT4G19460","AT4G19460.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0008219 cell death ","P ","1.96e-05 ","10/56 (17.9%) ","508/30324 (1.7%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 AT4G13820 EFR RLP46"," "]
["AT4G16900","AT4G16900.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT4G16890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","2.28e-05 ","16/56 (28.6%) ","1667/30324 (5.5%) ","AT4G16900 LAZ5 ALA3 RLP30 RLK CCR3 PMT5 ALA1 RPS4 SNC1 RPP5 EFR CRK28 HAE AT3G25510 RLP46"," "]
["AT3G25510","AT3G25510.1","disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: epidermis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G69550.1); Has 89074 Blast hits to 29960 proteins in 1009 species: Archae - 52; Bacteria - 3819; Metazoa - 7735; Fungi - 613; Plants - 72271; Viruses - 24; Other Eukaryotes - 4560 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","2.55e-05 ","13/56 (23.2%) ","1032/30324 (3.4%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 SNC1 RPP5 EFR CRK28 HAE RLP46"," "]
["AT4G22640","AT4G22640.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G22666.2); Has 25 Blast hits to 25 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009626 plant-type hypersensitive response ","P ","3.78e-05 ","9/56 (16.1%) ","406/30324 (1.3%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT4G29610","AT4G29610.1","Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, cytidine deaminase activity, zinc ion binding, catalytic activity; INVOLVED IN: cytidine deamination, cytidine metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytidine deaminase, homodimeric (InterPro:IPR006263), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine/deoxycytidylate deaminase, zinc-binding domain (InterPro:IPR013171); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29600.1); Has 3306 Blast hits to 3284 proteins in 1430 species: Archae - 58; Bacteria - 2532; Metazoa - 138; Fungi - 102; Plants - 130; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034050 host programmed cell death induced by symbiont ","P ","3.86e-05 ","9/56 (16.1%) ","407/30324 (1.3%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT3G56410","AT3G56410.2","Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT5G05190.1); Has 4873 Blast hits to 3554 proteins in 469 species: Archae - 21; Bacteria - 552; Metazoa - 1496; Fungi - 390; Plants - 373; Viruses - 48; Other Eukaryotes - 1993 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","5.93e-05 ","12/56 (21.4%) ","914/30324 (3.0%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 SNC1 RPP5 EFR HAE RLP46"," "]
["AT5G52670","AT5G52670.1","Copper transport protein family; BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT5G52720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006955 immune response ","P ","6.36e-05 ","12/56 (21.4%) ","920/30324 (3.0%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 SNC1 RPP5 EFR HAE RLP46"," "]
["AT5G22545","AT5G22545.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0012501 programmed cell death ","P ","1.09e-04 ","9/56 (16.1%) ","460/30324 (1.5%) ","LAZ5 ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT1G10050","AT1G10050.1","Encodes a putative glycosyl hydrolase family 10 protein (xylanase).","protein_coding",null,null," ","GO:0031347 regulation of defense response ","P ","4.78e-04 ","9/56 (16.1%) ","549/30324 (1.8%) ","ALA3 RLP30 RLK CCR3 PMT5 ALA1 RPS4 EFR RLP46"," "]
["AT2G44578","AT2G44578.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G44581.1); Has 9685 Blast hits to 9663 proteins in 277 species: Archae - 0; Bacteria - 6; Metazoa - 2319; Fungi - 820; Plants - 5125; Viruses - 38; Other Eukaryotes - 1377 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080134 regulation of response to stress ","P ","7.11e-04 ","9/56 (16.1%) ","576/30324 (1.9%) ","ALA3 RLP30 RLK CCR3 PMT5 ALA1 RPS4 EFR RLP46"," "]
["AT4G40080","AT4G40080.1","ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045088 regulation of innate immune response ","P ","7.55e-04 ","8/56 (14.3%) ","425/30324 (1.4%) ","ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT3G47090","AT3G47090.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050776 regulation of immune response ","P ","7.82e-04 ","8/56 (14.3%) ","427/30324 (1.4%) ","ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT4G13820","AT4G13820.1","Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, hypocotyl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002682 regulation of immune system process ","P ","8.24e-04 ","8/56 (14.3%) ","430/30324 (1.4%) ","ALA3 RLP30 RLK CCR3 ALA1 RPS4 EFR RLP46"," "]
["AT5G60350","AT5G60350.1","unknown protein; Has 110 Blast hits to 97 proteins in 36 species: Archae - 0; Bacteria - 10; Metazoa - 39; Fungi - 2; Plants - 5; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","3.82e-03 ","7/56 (12.5%) ","373/30324 (1.2%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT3G22555","AT3G22555.1","pseudogene, putative DNA methyltransferase","pseudogene",null,null," ","GO:0006612 protein targeting to membrane ","P ","4.10e-03 ","7/56 (12.5%) ","377/30324 (1.2%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT5G21960","AT5G21960.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding",null,null," ","GO:0090150 establishment of protein localization to membrane ","P ","4.24e-03 ","7/56 (12.5%) ","379/30324 (1.2%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT1G73810","AT1G73810.1","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G68390.1); Has 580 Blast hits to 580 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072657 protein localization to membrane ","P ","4.24e-03 ","7/56 (12.5%) ","379/30324 (1.2%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT1G11055","AT1G11055.1","Encodes a defensin-like (DEFL) family protein.","pseudogene",null,null," ","GO:0048583 regulation of response to stimulus ","P ","4.48e-03 ","9/56 (16.1%) ","722/30324 (2.4%) ","ALA3 RLP30 RLK CCR3 PMT5 ALA1 RPS4 EFR RLP46"," "]
["AT2G15760","AT2G15760.1","Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080135 regulation of cellular response to stress ","P ","4.86e-03 ","7/56 (12.5%) ","387/30324 (1.3%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT2G32130","AT2G32130.1","Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G29300.1); Has 208 Blast hits to 208 proteins in 30 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043067 regulation of programmed cell death ","P ","5.93e-03 ","7/56 (12.5%) ","399/30324 (1.3%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT5G57123","AT5G57123.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010941 regulation of cell death ","P ","6.74e-03 ","7/56 (12.5%) ","407/30324 (1.3%) ","ALA3 RLP30 RLK CCR3 ALA1 EFR RLP46"," "]
["AT2G32240","AT2G32240.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","7.80e-03 ","27/56 (48.2%) ","6619/30324 (21.8%) ","AT1G10050 AT2G32240 AT4G19460 AT4G16900 GATL2 LAZ5 RHA1A ALA3 RLP30 RLK CCR3 PMT5 ALA1 RPS4 AT4G40080 SBT3.3 SNC1 RPP5 AT4G13820 EFR IAA19 CRK28 HAE AT3G25510 RLP46 AT3G47090 ABCB21"," "]
["AT1G61420","AT1G61420.1","S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 124891 Blast hits to 122927 proteins in 4589 species: Archae - 114; Bacteria - 13852; Metazoa - 46086; Fungi - 10635; Plants - 35417; Viruses - 454; Other Eukaryotes - 18333 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G58782","AT5G58782.1","Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: ovule, embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT3G18370","AT3G18370.1","ATSYTF; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 3360; Fungi - 437; Plants - 1305; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink).","protein_coding"," (ATSYTF)"," (SYTF); (NTMC2T3); (NTMC2TYPE3); (ATSYTF)"," ","Cellular Component",{"$nulls":5}," "]
["AT1G32960","AT1G32960.1","SBT3.3; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT1G32950.1); Has 7025 Blast hits to 6424 proteins in 1056 species: Archae - 218; Bacteria - 3952; Metazoa - 121; Fungi - 168; Plants - 1966; Viruses - 0; Other Eukaryotes - 600 (source: NCBI BLink).","protein_coding"," (SBT3.3)"," (SBT3.3); (ATSBT3.3)"," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G52320","AT5G52320.1","member of CYP96A","protein_coding","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 4 (CYP96A4)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 4 (CYP96A4)"," ","GO:0005886 plasma membrane ","C ","9.03e-03 ","18/56 (32.1%) ","3258/30324 (10.7%) ","AT2G32240 ALA3 RLP30 RLK AT1G61420 CCR3 PMT5 ALA1 OPT2 AT2G15760 SD2-5 AT4G13820 EFR SVL3 HAE RLP46 AT3G47090 ABCB21"," "]
["AT5G04930","AT5G04930.1","Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.  It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit.","protein_coding","AMINOPHOSPHOLIPID ATPASE 1 (ALA1)","AMINOPHOSPHOLIPID ATPASE 1 (ALA1)"," ",{"$nulls":6}," "]
["AT1G59820","AT1G59820.1","Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.","protein_coding","AMINOPHOSPHOLIPID ATPASE 3 (ALA3)","AMINOPHOSPHOLIPID ATPASE 3 (ALA3)"," "," ",{"$nulls":5}," "]
["AT3G62150","AT3G62150.1","P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink).","protein_coding","ATP-BINDING CASSETTE B21 (ABCB21)","ATP-BINDING CASSETTE B21 (ABCB21);P-GLYCOPROTEIN 21 (PGP21)"," ","Molecular Function",{"$nulls":5}," "]
["AT4G15233","AT4G15233.2","ABC-2 and Plant PDR ABC-type transporter family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT4G15236.1).","protein_coding","ATP-BINDING CASSETTE G42 (ABCG42)","ATP-BINDING CASSETTE G42 (ABCG42)"," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G15236","AT4G15236.1","ABC-2 and Plant PDR ABC-type transporter family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT4G15233.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","ATP-BINDING CASSETTE G43 (ABCG43)","ATP-BINDING CASSETTE G43 (ABCG43)"," ","GO:0016740 transferase activity ","F ","3.38e-04 ","18/56 (32.1%) ","2589/30324 (8.5%) ","AT4G19460 GATL2 AT1G73810 XTH19 RLP30 RLK YDA AT1G61420 CCR3 SD2-5 AT4G13820 EFR CSLD1 cPT6 CRK28 HAE RLP46 AT3G47090"," "]
["AT2G33100","AT2G33100.1","encodes a gene similar to cellulose synthase","protein_coding","CELLULOSE SYNTHASE-LIKE D1 (CSLD1)","CELLULOSE SYNTHASE-LIKE D1 (CSLD1);CELLULOSE-SYNTHASE LIKE D1 (CSLD1);CELLULOSE SYNTHASE-LIKE D1 (ATCSLD1)"," ","GO:0016301 kinase activity ","F ","2.07e-03 ","12/56 (21.4%) ","1279/30324 (4.2%) ","RLP30 RLK YDA AT1G61420 CCR3 SD2-5 AT4G13820 EFR CRK28 HAE RLP46 AT3G47090"," "]
["AT3G55950","AT3G55950.1","CRINKLY4 related 3 (CCR3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 4 (TAIR:AT5G47850.1); Has 117697 Blast hits to 115463 proteins in 4296 species: Archae - 105; Bacteria - 13273; Metazoa - 42642; Fungi - 9844; Plants - 33569; Viruses - 607; Other Eukaryotes - 17657 (source: NCBI BLink).","protein_coding","CRINKLY4 RELATED 3 (CCR3)"," (ATCRR3);CRINKLY4 RELATED 3 (CCR3)"," ","GO:0016772 transferase activity, transferring phosphorus-containing groups ","F ","6.95e-03 ","12/56 (21.4%) ","1441/30324 (4.8%) ","RLP30 RLK YDA AT1G61420 CCR3 SD2-5 AT4G13820 EFR CRK28 HAE RLP46 AT3G47090"," "]
["AT4G21400","AT4G21400.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 28 (CRK28)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 28 (CRK28)"," ",{"$nulls":6}," "]
["AT5G20480","AT5G20480.1","Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK).  Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.","protein_coding","EF-TU RECEPTOR (EFR)","EF-TU RECEPTOR (EFR)"," ","  ",{"$nulls":5}," "]
["AT3G50760","AT3G50760.1","Encodes a protein with  putative galacturonosyltransferase activity.","protein_coding","GALACTURONOSYLTRANSFERASE-LIKE 2 (GATL2)","GALACTURONOSYLTRANSFERASE-LIKE 2 (GATL2)"," ",{"$nulls":6}," "]
["AT4G28490","AT4G28490.1","member of Receptor kinase-like protein family","protein_coding","HAESA (HAE)","HAESA (HAE);RECEPTOR-LIKE PROTEIN KINASE 5 (RLK5)"," ",{"$nulls":6}," "]
["AT5G65350","AT5G65350.1","histone 3 11 (HTR11); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","HISTONE 3 11 (HTR11)","HISTONE 3 11 (HTR11)"," ",{"$nulls":6}," "]
["AT3G15540","AT3G15540.1","Primary auxin-responsive gene. Involved in the regulation stamen filaments development.","protein_coding","INDOLE-3-ACETIC ACID INDUCIBLE 19 (IAA19)","MASSUGU 2 (MSG2);INDOLE-3-ACETIC ACID INDUCIBLE 19 (IAA19)"," ",{"$nulls":6}," "]
["AT5G44870","AT5G44870.1","Encodes LAZ5, a TIR-class NB-LRR R protein of unknown pathogen specificity with sequence similarity to RPS4, an R protein conferring resistance to Pseudomonas syringae expressing the effector AvrRPS4.  Overexpression of LAZ5 results in hypersensitive cell death (plants did not survive to set seeds).","protein_coding","LAZARUS 5 (LAZ5)","TOLERANCE TO TOBACCO RINGSPOT VIRUS 1 (TTR1);LAZARUS 5 (LAZ5)"," ",{"$nulls":6}," "]
["AT1G09930","AT1G09930.1","oligopeptide transporter","protein_coding","OLIGOPEPTIDE TRANSPORTER 2 (OPT2)","OLIGOPEPTIDE TRANSPORTER 2 (OPT2);OLIGOPEPTIDE TRANSPORTER 2 (ATOPT2)"," ",{"$nulls":6}," "]
["AT3G18830","AT3G18830.1","This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (<i>myo</i>-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.","protein_coding","POLYOL/MONOSACCHARIDE TRANSPORTER 5 (PMT5)","ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5 (ATPMT5);POLYOL/MONOSACCHARIDE TRANSPORTER 5 (PMT5);POLYOL TRANSPORTER 5 (ATPLT5)"," ",{"$nulls":6}," "]
["AT2G37710","AT2G37710.1","Induced in response to Salicylic acid.","protein_coding","RECEPTOR LECTIN KINASE (RLK)","RECEPTOR LECTIN KINASE (RLK)"," ",{"$nulls":6}," "]
["AT3G05360","AT3G05360.1","receptor like protein 30 (RLP30); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, signal transduction, response to cyclopentenone, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 11 (TAIR:AT1G71390.1); Has 101325 Blast hits to 29993 proteins in 1145 species: Archae - 37; Bacteria - 7130; Metazoa - 23873; Fungi - 1058; Plants - 61263; Viruses - 2; Other Eukaryotes - 7962 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 30 (RLP30)","RECEPTOR LIKE PROTEIN 30 (RLP30);RECEPTOR LIKE PROTEIN 30 (AtRLP30)"," ",{"$nulls":6}," "]
["AT4G04220","AT4G04220.1","receptor like protein 46 (RLP46); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 134299 Blast hits to 33174 proteins in 1147 species: Archae - 55; Bacteria - 10381; Metazoa - 36724; Fungi - 1470; Plants - 75311; Viruses - 4; Other Eukaryotes - 10354 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 46 (RLP46)","RECEPTOR LIKE PROTEIN 46 (RLP46);RECEPTOR LIKE PROTEIN 46 (AtRLP46)"," ",{"$nulls":6}," "]
["AT4G16950","AT4G16950.1","Contains a putative nucleotide binding site and leucine-rich repeats. Similar to the plant resistance genes N and L6, and to the toll and interleukin-1 receptors. Confers resistance to Peronospora parasitica.","protein_coding","RECOGNITION OF PERONOSPORA PARASITICA 5 (RPP5)","RECOGNITION OF PERONOSPORA PARASITICA 5 (RPP5)"," ",{"$nulls":6}," "]
["AT5G45250","AT5G45250.1","RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames.","protein_coding","RESISTANT TO P. SYRINGAE 4 (RPS4)","RESISTANT TO P. SYRINGAE 4 (RPS4)"," ",{"$nulls":6}," "]
["AT4G11370","AT4G11370.1","Encodes a putative RING-H2 finger protein RHA1a.","protein_coding","RING-H2 FINGER A1A (RHA1A)","RING-H2 FINGER A1A (RHA1A)"," ",{"$nulls":6}," "]
["AT4G32300","AT4G32300.1","S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink).","protein_coding","S-DOMAIN-2 5 (SD2-5)","S-DOMAIN-2 5 (SD2-5)"," ",{"$nulls":6}," "]
["AT3G20520","AT3G20520.1","Encodes a member of the glycerophosphodiester phosphodiesterase like (GDPD-like) family.","protein_coding","SHV3-LIKE 3 (SVL3)","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD) LIKE 5 (GDPDL5);SHV3-LIKE 3 (SVL3)"," ",{"$nulls":6}," "]
["AT4G16890","AT4G16890.1","Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu-  rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4.","protein_coding","SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 (SNC1)","BALL (BAL);SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 (SNC1)"," ",{"$nulls":6}," "]
["AT3G63500","AT3G63500.2","Encodes a PHD-finger protein that, with TTA2, is redundantly required for MP-dependent embryonic root meristem initiation.","protein_coding","TITANIA 2 (TTA2)","TITANIA 2 (TTA2)"," ",{"$nulls":6}," "]
["AT4G30290","AT4G30290.1","Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC   2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (XTH19)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (XTH19);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (ATXTH19)"," ",{"$nulls":6}," "]
["AT1G63700","AT1G63700.1","Member of MEKK subfamily, a component of the stomatal development regulatory pathway.  Mutations in this locus result in embryo lethality.","protein_coding","YODA (YDA)","EMBRYO DEFECTIVE 71 (EMB71);YODA (YDA);MAP KINASE KINASE KINASE 4 (MAPKKK4)"," ",{"$nulls":6}," "]
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{"sheet":"16","index":16,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G24735","AT5G24735.1","Unknown gene","other_rna",null,null," ","Biological Process",{"$nulls":5}," "]
["AT3G15440","AT3G15440.1","BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15740.1); Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G16460","AT4G16460.1","unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 4; Plants - 16; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009750 response to fructose stimulus ","P ","6.12e-08 ","9/74 (12.2%) ","144/30324 (0.5%) ","SEN1 ASN1 THA1 DIN4 IVD DIN2 FBP MCCA BCAT-2"," "]
["AT4G15610","AT4G15610.1","Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G06390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009746 response to hexose stimulus ","P ","2.99e-07 ","9/74 (12.2%) ","172/30324 (0.6%) ","SEN1 ASN1 THA1 DIN4 IVD DIN2 FBP MCCA BCAT-2"," "]
["AT4G28040","AT4G28040.1","nodulin MtN21-like transporter family protein","protein_coding",null,null," ","GO:0034284 response to monosaccharide stimulus ","P ","3.67e-07 ","9/74 (12.2%) ","176/30324 (0.6%) ","SEN1 ASN1 THA1 DIN4 IVD DIN2 FBP MCCA BCAT-2"," "]
["AT1G22490","AT1G22490.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034285 response to disaccharide stimulus ","P ","1.97e-06 ","9/74 (12.2%) ","213/30324 (0.7%) ","SEN1 ASN1 THA1 DIN4 IVD AT1G21400 DIN2 MCCA BCAT-2"," "]
["AT4G04745","AT4G04745.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009744 response to sucrose stimulus ","P ","1.97e-06 ","9/74 (12.2%) ","213/30324 (0.7%) ","SEN1 ASN1 THA1 DIN4 IVD AT1G21400 DIN2 MCCA BCAT-2"," "]
["AT1G07040","AT1G07040.1","unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043617 cellular response to sucrose starvation ","P ","4.21e-05 ","3/74 (4.1%) ","4/30324 (0.0%) ","ASN1 DIN4 AT1G21400"," "]
["AT4G20362","AT4G20362.1","Potential natural antisense gene, locus overlaps with AT4G20360","other_rna",null,null," ","GO:0009743 response to carbohydrate stimulus ","P ","4.39e-05 ","10/74 (13.5%) ","408/30324 (1.3%) ","SEN1 ASN1 THA1 DIN4 IVD AT1G21400 DIN2 FBP MCCA BCAT-2"," "]
["AT1G78720","AT1G78720.1","SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 4820 Blast hits to 4813 proteins in 2037 species: Archae - 276; Bacteria - 3174; Metazoa - 262; Fungi - 229; Plants - 171; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006552 leucine catabolic process ","P ","1.05e-04 ","3/74 (4.1%) ","5/30324 (0.0%) ","IVD MCCB MCCA"," "]
["AT3G19390","AT3G19390.1","Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 9061 Blast hits to 8168 proteins in 770 species: Archae - 67; Bacteria - 297; Metazoa - 4335; Fungi - 6; Plants - 1937; Viruses - 140; Other Eukaryotes - 2279 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009083 branched-chain amino acid catabolic process ","P ","2.10e-04 ","3/74 (4.1%) ","6/30324 (0.0%) ","IVD MCCB MCCA"," "]
["AT5G03120","AT5G03120.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009646 response to absence of light ","P ","1.53e-03 ","4/74 (5.4%) ","37/30324 (0.1%) ","AT1G13990 ASN1 DIN4 AT1G21400"," "]
["AT5G14470","AT5G14470.1","GHMP kinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: inflorescence meristem, flower, carpel, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: glucuronokinase G (TAIR:AT3G01640.1); Has 369 Blast hits to 369 proteins in 134 species: Archae - 34; Bacteria - 179; Metazoa - 12; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009063 cellular amino acid catabolic process ","P ","2.62e-03 ","6/74 (8.1%) ","167/30324 (0.6%) ","ASN1 THA1 IVD MCCB MCCA ERD5"," "]
["AT4G12290","AT4G12290.1","Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","3.65e-03 ","19/74 (25.7%) ","2459/30324 (8.1%) ","AT4G15610 SPL3 SEN1 XTH24 CDPK2 ASN1 BZS1 ATBETAFRUCT4 KAT3 THA1 DIN4 IVD RbcX1 AT1G21400 DIN2 FBP MCCA ERD5 BCAT-2"," "]
["AT4G15680","AT4G15680.1","Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1780 Blast hits to 1775 proteins in 241 species: Archae - 0; Bacteria - 33; Metazoa - 511; Fungi - 333; Plants - 758; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006551 leucine metabolic process ","P ","3.76e-03 ","3/74 (4.1%) ","14/30324 (0.0%) ","IVD MCCB MCCA"," "]
["AT5G67490","AT5G67490.1","unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1674 (InterPro:IPR012875); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044712 single-organism catabolic process ","P ","8.90e-03 ","9/74 (12.2%) ","580/30324 (1.9%) ","AT4G15610 MPL1 ASN1 THA1 IVD MCCB MCCA ERD5 BCAT-2"," "]
["AT5G06570","AT5G06570.1","alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009081 branched-chain amino acid metabolic process ","P ","9.92e-03 ","3/74 (4.1%) ","19/30324 (0.1%) ","IVD MCCB MCCA"," "]
["AT2G23110","AT2G23110.1","Late embryogenesis abundant protein, group 6; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 6 (InterPro:IPR018930); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 6 (TAIR:AT2G23120.1); Has 37 Blast hits to 37 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G21400","AT1G21400.1","Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT1G19540","AT1G19540.1","NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2081 Blast hits to 2077 proteins in 492 species: Archae - 4; Bacteria - 817; Metazoa - 4; Fungi - 543; Plants - 557; Viruses - 7; Other Eukaryotes - 149 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G62480","AT1G62480.1","Vacuolar calcium-binding protein-related; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 21787 Blast hits to 9668 proteins in 1087 species: Archae - 111; Bacteria - 3941; Metazoa - 6730; Fungi - 2179; Plants - 741; Viruses - 179; Other Eukaryotes - 7906 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G62510","AT1G62510.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, cotyledon, leaf whorl, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12490.1); Has 25891 Blast hits to 3864 proteins in 588 species: Archae - 46; Bacteria - 7812; Metazoa - 1674; Fungi - 617; Plants - 4225; Viruses - 1248; Other Eukaryotes - 10269 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G44130","AT1G44130.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, embryo, pedicel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G77480.2); Has 1835 Blast hits to 1829 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 37; Plants - 1697; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G23240","AT5G23240.1","DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G29670","AT2G29670.1","Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 535 Blast hits to 340 proteins in 62 species: Archae - 10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G30930","AT2G30930.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi - 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G39070","AT4G39070.1","B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to karrikin, response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homolog2 (TAIR:AT1G75540.1); Has 1892 Blast hits to 1305 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1793; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G50560","AT3G50560.1","NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G13990","AT1G13990.3","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G17345","AT1G17345.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G72430.1); Has 128 Blast hits to 128 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G57655","AT5G57655.2","xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G25770","AT2G25770.1","Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G32870.1); Has 173 Blast hits to 173 proteins in 49 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G12240","AT1G12240.1","Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum  through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole.","protein_coding"," (ATBETAFRUCT4)","FRUCTOSIDASE 4 (FRUCT4); (ATFRUCT4); (ATBETAFRUCT4);VACUOLAR INVERTASE (VAC-INV)"," ",{"$nulls":6}," "]
["AT1G03090","AT1G03090.2","MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.","protein_coding"," (MCCA)"," (MCCA)"," ",{"$nulls":6}," "]
["AT3G22640","AT3G22640.1","PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).","protein_coding"," (PAP85)"," (PAP85)"," ",{"$nulls":6}," "]
["AT1G21650","AT1G21650.3","Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.  Loss-of-function mutations result in arrest at the globular stage and embryo lethality.","protein_coding"," (SECA2)"," (SECA2)"," ",{"$nulls":6}," "]
["AT5G25140","AT5G25140.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 13 (CYP71B13)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 13 (CYP71B13)"," ",{"$nulls":6}," "]
["AT3G03470","AT3G03470.1","member of CYP89A","protein_coding","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 9 (CYP89A9)","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 9 (CYP89A9)"," ",{"$nulls":6}," "]
["AT4G34030","AT4G34030.1","MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.","protein_coding","3-METHYLCROTONYL-COA CARBOXYLASE (MCCB)","3-METHYLCROTONYL-COA CARBOXYLASE (MCCB)"," ",{"$nulls":6}," "]
["AT2G38400","AT2G38400.2","alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,","protein_coding","ALANINE:GLYOXYLATE AMINOTRANSFERASE 3 (AGT3)","ALANINE:GLYOXYLATE AMINOTRANSFERASE 3 (AGT3)"," ",{"$nulls":6}," "]
["AT5G56870","AT5G56870.1","beta-galactosidase 4 (BGAL4); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 12 (TAIR:AT4G26140.1); Has 2215 Blast hits to 2058 proteins in 473 species: Archae - 15; Bacteria - 949; Metazoa - 388; Fungi - 211; Plants - 584; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).","protein_coding","BETA-GALACTOSIDASE 4 (BGAL4)","BETA-GALACTOSIDASE 4 (BGAL4)"," ",{"$nulls":6}," "]
["AT1G10070","AT1G10070.1","Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.","protein_coding","BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (BCAT-2)","BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (BCAT-2);BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (ATBCAT-2)"," ",{"$nulls":6}," "]
["AT1G35670","AT1G35670.1","Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.","protein_coding","CALCIUM-DEPENDENT PROTEIN KINASE 2 (CDPK2)","CALCIUM-DEPENDENT PROTEIN KINASE 2 (ATCDPK2);CALCIUM-DEPENDENT PROTEIN KINASE 2 (CDPK2); (ATCPK11); (CPK11)"," ",{"$nulls":6}," "]
["AT5G42900","AT5G42900.1","cold regulated gene 27 (COR27); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33980.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","COLD REGULATED GENE 27 (COR27)","COLD REGULATED GENE 27 (COR27)"," ",{"$nulls":6}," "]
["AT3G60140","AT3G60140.1","Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","protein_coding","DARK INDUCIBLE 2 (DIN2)","DARK INDUCIBLE 2 (DIN2);SENESCENCE-RELATED GENE 2 (SRG2);BETA GLUCOSIDASE 30 (BGLU30)"," ",{"$nulls":6}," "]
["AT3G13450","AT3G13450.1","branched chain alpha-keto acid dehydrogenase E1 beta","protein_coding","DARK INDUCIBLE 4 (DIN4)","DARK INDUCIBLE 4 (DIN4)"," ",{"$nulls":6}," "]
["AT4G13830","AT4G13830.2","DnaJ-like protein (J20); nuclear gene","protein_coding","DNAJ-LIKE 20 (J20)","DNAJ-LIKE 20 (J20)"," ",{"$nulls":6}," "]
["AT3G30775","AT3G30775.1","Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress.  The promoter contains an L-proline-inducible element.","protein_coding","EARLY RESPONSIVE TO DEHYDRATION 5 (ERD5)","EARLY RESPONSIVE TO DEHYDRATION 5 (ERD5);PROLINE DEHYDROGENASE (PRODH); (AT-POX);PROLINE DEHYDROGENASE 1 (PDH1); (ATPDH); (PRO1);ARABIDOPSIS THALIANA PROLINE OXIDASE (ATPOX)"," ",{"$nulls":6}," "]
["AT5G44130","AT5G44130.1","FASCICLIN-like arabinogalactan protein 13 precursor (FLA13); FUNCTIONS IN: molecular_function unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinoogalactan 9 (TAIR:AT1G03870.1); Has 960 Blast hits to 947 proteins in 155 species: Archae - 12; Bacteria - 234; Metazoa - 13; Fungi - 0; Plants - 680; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).","protein_coding","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR (FLA13)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR (FLA13)"," ",{"$nulls":6}," "]
["AT1G43670","AT1G43670.1","Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus.","protein_coding","FRUCTOSE-1,6-BISPHOSPHATASE (FBP)","FRUCTOSE INSENSITIVE 1 (FINS1);FRUCTOSE-1,6-BISPHOSPHATASE (FBP);ARABIDOPSIS THALIANA CYTOSOLIC FRUCTOSE-1,6-BISPHOSPHATASE (AtcFBP)"," ",{"$nulls":6}," "]
["AT4G32940","AT4G32940.1","Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.","protein_coding","GAMMA VACUOLAR PROCESSING ENZYME (GAMMA-VPE)"," (GAMMAVPE);GAMMA VACUOLAR PROCESSING ENZYME (GAMMA-VPE)"," ",{"$nulls":6}," "]
["AT1G15040","AT1G15040.1","Encodes a nitrogen regulated putative glutamine amidotransferase that represses shoot branching.","protein_coding","GLUTAMINE AMIDOTRANSFERASE 1_2.1 (GAT1_2.1)","GLUTAMINE AMIDOTRANSFERASE (GAT);GLUTAMINE AMIDOTRANSFERASE 1_2.1 (GAT1_2.1)"," ",{"$nulls":6}," "]
["AT3G47340","AT3G47340.1","encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and  is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","protein_coding","GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (ASN1)","GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (ASN1);ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (AT-ASN1);DARK INDUCIBLE 6 (DIN6)"," ",{"$nulls":6}," "]
["AT5G41080","AT5G41080.1","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","protein_coding","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 2 (GDPD2)"," (AtGDPD2);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 2 (GDPD2)"," ",{"$nulls":6}," "]
["AT1G21360","AT1G21360.1","glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).","protein_coding","GLYCOLIPID TRANSFER PROTEIN 2 (GLTP2)","GLYCOLIPID TRANSFER PROTEIN 2 (GLTP2)"," ",{"$nulls":6}," "]
["AT4G04330","AT4G04330.1","Encodes a chloroplast thylakoid localized RbcX protein that acts as a chaperone in the folding of Rubisco.","protein_coding","HOMOLOGUE OF CYANOBACTERIAL RBCX 1 (RbcX1)","HOMOLOGUE OF CYANOBACTERIAL RBCX 1 (RbcX1); (AtRbcX1)"," ",{"$nulls":6}," "]
["AT3G45300","AT3G45300.1","Encodes isovaleryl-coenzyme a dehydrogenase.  Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.","protein_coding","ISOVALERYL-COA-DEHYDROGENASE (IVD)","ISOVALERYL-COA-DEHYDROGENASE (IVDH);ISOVALERYL-COA-DEHYDROGENASE (IVD); (ATIVD)"," ",{"$nulls":6}," "]
["AT2G15890","AT2G15890.1","maternal effect embryo arrest 14 (MEE14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to fungus, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 87 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding","MATERNAL EFFECT EMBRYO ARREST 14 (MEE14)","MATERNAL EFFECT EMBRYO ARREST 14 (MEE14)"," ",{"$nulls":6}," "]
["AT2G19800","AT2G19800.1","Encodes a myo-inositol oxygenase family gene.","protein_coding","MYO-INOSITOL OXYGENASE 2 (MIOX2)","MYO-INOSITOL OXYGENASE 2 (MIOX2)"," ",{"$nulls":6}," "]
["AT5G14180","AT5G14180.1","Myzus persicae-induced lipase 1 (MPL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: lipase 1 (TAIR:AT2G15230.1); Has 1911 Blast hits to 1879 proteins in 244 species: Archae - 0; Bacteria - 109; Metazoa - 1225; Fungi - 283; Plants - 181; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).","protein_coding","MYZUS PERSICAE-INDUCED LIPASE 1 (MPL1)","MYZUS PERSICAE-INDUCED LIPASE 1 (MPL1)"," ",{"$nulls":6}," "]
["AT1G79360","AT1G79360.1","organic cation/carnitine transporter 2 (2-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, ion transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Organic cation transport protein (InterPro:IPR004749), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 3 (TAIR:AT1G16390.1); Has 24066 Blast hits to 23860 proteins in 1933 species: Archae - 496; Bacteria - 11644; Metazoa - 4565; Fungi - 4772; Plants - 1707; Viruses - 0; Other Eukaryotes - 882 (source: NCBI BLink).","protein_coding","ORGANIC CATION/CARNITINE TRANSPORTER 2 (OCT2)","ORGANIC CATION/CARNITINE TRANSPORTER 2 (ATOCT2);ORGANIC CATION TRANSPORTER 2 (OCT2);ORGANIC CATION/CARNITINE TRANSPORTER 2 (OCT2)"," ",{"$nulls":6}," "]
["AT2G22860","AT2G22860.1","Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.","protein_coding","PHYTOSULFOKINE 2 PRECURSOR (PSK2)","PHYTOSULFOKINE 2 PRECURSOR (ATPSK2);PHYTOSULFOKINE 2 PRECURSOR (PSK2)"," ",{"$nulls":6}," "]
["AT4G32650","AT4G32650.1","Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","protein_coding","POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 3 (KAT3)","ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1);POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 3 (KAT3); (KC1);A. THALIANA LOW-K+-TOLERANT 1 (AtLKT1)"," ",{"$nulls":6}," "]
["AT3G53620","AT3G53620.1","Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.","protein_coding","PYROPHOSPHORYLASE 4 (PPa4)","PYROPHOSPHORYLASE 4 (PPa4);PYROPHOSPHORYLASE 4 (AtPPa4)"," ",{"$nulls":6}," "]
["AT5G60860","AT5G60860.1","RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","RAB GTPASE HOMOLOG A1F (RABA1f)","RAB GTPASE HOMOLOG A1F (RABA1f);RAB GTPASE HOMOLOG A1F (AtRABA1f)"," ",{"$nulls":6}," "]
["AT3G15820","AT3G15820.1","Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation  and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols  synthesis pathway","protein_coding","REDUCED OLEATE DESATURATION 1 (ROD1)","REDUCED OLEATE DESATURATION 1 (ROD1)"," ",{"$nulls":6}," "]
["AT3G57520","AT3G57520.1","SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2.","protein_coding","SEED IMBIBITION 2 (SIP2)","SEED IMBIBITION 2 (AtSIP2);RAFFINOSE SYNTHASE 2 (RS2);SEED IMBIBITION 2 (SIP2)"," ",{"$nulls":6}," "]
["AT4G35770","AT4G35770.1","Senescence-associated gene that is strongly induced by phosphate starvation.  Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","protein_coding","SENESCENCE 1 (SEN1)","SENESCENCE 1 (SEN1);DARK INDUCIBLE 1 (DIN1);ARABIDOPSIS THALIANA SENESCENCE 1 (ATSEN1);SENESCENCE ASSOCIATED GENE 1 (SEN1)"," ",{"$nulls":6}," "]
["AT2G33810","AT2G33810.1","Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors.  Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change.  Its temporal expression is regulated by the microRNA miR156.  The target site for the microRNA is in the 3'UTR.","protein_coding","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3 (SPL3)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3 (SPL3)"," ",{"$nulls":6}," "]
["AT1G11260","AT1G11260.1","Encodes a H+/hexose cotransporter.","protein_coding","SUGAR TRANSPORTER 1 (STP1)","SUGAR TRANSPORTER 1 (STP1);SUGAR TRANSPORTER 1 (ATSTP1)"," ",{"$nulls":6}," "]
["AT1G08630","AT1G08630.1","Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","protein_coding","THREONINE ALDOLASE 1 (THA1)","THREONINE ALDOLASE 1 (THA1)"," ",{"$nulls":6}," "]
["AT4G14130","AT4G14130.1","xyloglucan endotransglycosylase-related protein (XTR7)","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 15 (XTH15)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 15 (XTH15);XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7 (XTR7)"," ",{"$nulls":6}," "]
["AT4G30270","AT4G30270.1","encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 24 (XTH24)","MERISTEM-5 (MERI5B);SENESCENCE 4 (SEN4);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 24 (XTH24);MERISTEM 5 (MERI-5)"," ",{"$nulls":6}," "]
["AT1G10550","AT1G10550.1","Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.","protein_coding","XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33 (XTH33)","XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33 (XTH33);XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33 (XET)"," ",{"$nulls":6}," "]
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{"sheet":"17","index":17,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT4G12490","AT4G12490.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12500.1); Has 18352 Blast hits to 7356 proteins in 861 species: Archae - 114; Bacteria - 4375; Metazoa - 2713; Fungi - 1220; Plants - 5360; Viruses - 1445; Other Eukaryotes - 3125 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G73600","AT1G73600.2","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G33370","AT5G33370.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 3330 Blast hits to 3291 proteins in 163 species: Archae - 0; Bacteria - 218; Metazoa - 0; Fungi - 9; Plants - 3088; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006354 DNA-dependent transcription, elongation ","P ","3.70e-13 ","12/77 (15.6%) ","126/30324 (0.4%) ","NDHD YCF4 PSAA ORF31 PSAC PSBB PSBA ACCD NDHE RPS15 PSBT NDHG"," "]
["AT4G12500","AT4G12500.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; EXPRESSED IN: hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12490.1); Has 10886 Blast hits to 4309 proteins in 594 species: Archae - 53; Bacteria - 1827; Metazoa - 1251; Fungi - 647; Plants - 4075; Viruses - 997; Other Eukaryotes - 2036 (source: NCBI BLink).","protein_coding",null,null," ","GO:0015979 photosynthesis ","P ","3.75e-08 ","13/77 (16.9%) ","419/30324 (1.4%) ","NDHD YCF4 PSAA ORF31 PSAC PSBB ESM1 PSBA ACCD NDHE RPS15 PSBT NDHG"," "]
["AT1G73120","AT1G73120.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019684 photosynthesis, light reaction ","P ","4.05e-07 ","11/77 (14.3%) ","317/30324 (1.0%) ","NDHD YCF4 PSAA ORF31 PSAC PSBB PSBA ACCD NDHE PSBT NDHG"," "]
["AT2G26695","AT2G26695.1","Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006091 generation of precursor metabolites and energy ","P ","3.93e-05 ","12/77 (15.6%) ","615/30324 (2.0%) ","NDHD YCF4 PSAA ORF31 PSAC PSBB PSBA ACCD NDHE RPS15 PSBT NDHG"," "]
["AT5G44578","AT5G44578.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G39520","AT5G39520.1","Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39530.1); Has 157 Blast hits to 157 proteins in 60 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT4G33720","AT4G33720.1","CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT4G12545","AT4G12545.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Auxin-Induced in Root cultures 1 (TAIR:AT4G12550.1); Has 752 Blast hits to 746 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G26255","AT4G26255.1","Unknown gene","other_rna",null,null," ","GO:0009521 photosystem ","C ","1.62e-04 ","5/77 (6.5%) ","51/30324 (0.2%) ","PSAA PSAC PSBB PSBA PSBT"," "]
["AT4G14548","AT4G14548.1","other RNA","other_rna",null,null," ","GO:0005576 extracellular region ","C ","9.01e-04 ","22/77 (28.6%) ","2804/30324 (9.2%) ","AT1G69730 PR-1-LIKE AT2G19970 AT1G29090 AT4G12545 AT1G29080 AIR1 AT1G52070 AT5G44578 EXPA15 AT1G52780 EXPB3 PDF1.4 LCR67 ESM1 AT5G33370 AT2G33850 M10 AT5G19890 AT4G33720 AT3G16670 AT4G12500"," "]
["AT1G56300","AT1G56300.1","Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to cyclopentenone; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G71000.1); Has 23532 Blast hits to 23527 proteins in 3290 species: Archae - 175; Bacteria - 9754; Metazoa - 3953; Fungi - 2136; Plants - 2298; Viruses - 10; Other Eukaryotes - 5206 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G15128","AT2G15128.1","other RNA","other_rna",null,null," "," ",{"$nulls":5}," "]
["AT1G67105","AT1G67105.1","other RNA","other_rna",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT2G33850","AT2G33850.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G29090","AT1G29090.1","Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G34080.1); Has 7810 Blast hits to 7748 proteins in 713 species: Archae - 51; Bacteria - 224; Metazoa - 3316; Fungi - 4; Plants - 1901; Viruses - 135; Other Eukaryotes - 2179 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016168 chlorophyll binding ","F ","1.07e-03 ","4/77 (5.2%) ","32/30324 (0.1%) ","PSAA PSBB PSBA PSBT"," "]
["AT3G16670","AT3G16670.1","Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16660.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0046906 tetrapyrrole binding ","F ","5.15e-03 ","4/77 (5.2%) ","47/30324 (0.2%) ","PSAA PSBB PSBA PSBT"," "]
["AT2G19970","AT2G19970.1","CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular region; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT2G19980.1); Has 2315 Blast hits to 2257 proteins in 296 species: Archae - 0; Bacteria - 56; Metazoa - 1092; Fungi - 268; Plants - 864; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G23110","AT1G23110.1","unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT1G52070","AT1G52070.1","Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G52060.1); Has 1736 Blast hits to 822 proteins in 55 species: Archae - 0; Bacteria - 8; Metazoa - 31; Fungi - 2; Plants - 1691; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G19890","AT5G19890.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G35375","AT5G35375.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G22237","AT3G22237.1","pseudogene, putative ribulose 1,5-bisphosphate carboxylase, similar to ribulose 1,5-bisphosphate carboxylase GB:AAA62120 from (Mentzelia decapetala); blastp match of 62% identity and 4.8e-31 P-value to GP|25053482|gb|AAN71865.1||AF297143 ribulose-1,5-bisphosphate carboxylase {Persicaria punctata}","pseudogene",null,null," ",{"$nulls":6}," "]
["AT3G22232","AT3G22232.1","pseudogene, putative ribulose 1,5-bisphosphate carboxylase, similar to ribulose 1,5-bisphosphate carboxylase GB:AAA62120 from (Mentzelia decapetala); blastp match of 62% identity and 4.8e-31 P-value to GP|25053482|gb|AAN71865.1||AF297143 ribulose-1,5-bisphosphate carboxylase {Persicaria punctata}","pseudogene",null,null," ",{"$nulls":6}," "]
["AT3G21460","AT3G21460.1","Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15700.1); Has 1364 Blast hits to 1360 proteins in 220 species: Archae - 0; Bacteria - 35; Metazoa - 262; Fungi - 243; Plants - 766; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G64190","AT5G64190.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G27402","AT2G27402.1","BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 18 (TAIR:AT2G32180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G69730","AT1G69730.1","Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: WALL ASSOCIATED KINASE (WAK)-LIKE 10 (TAIR:AT1G79680.1); Has 118696 Blast hits to 117097 proteins in 4295 species: Archae - 105; Bacteria - 13298; Metazoa - 44157; Fungi - 9958; Plants - 33203; Viruses - 492; Other Eukaryotes - 17483 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G04460","AT2G04460.1","transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10090.1); similar to pol polyprotein [Citrus x paradisi] (GB:AAK70407.1)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT1G29080","AT1G29080.1","Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G29090.1); Has 7819 Blast hits to 7758 proteins in 724 species: Archae - 63; Bacteria - 249; Metazoa - 3289; Fungi - 4; Plants - 1890; Viruses - 133; Other Eukaryotes - 2191 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G35120","AT5G35120.1","MADS-box family protein; BEST Arabidopsis thaliana protein match is: MADS-box family protein (TAIR:AT1G59930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G21390","AT2G21390.1","Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 80927 Blast hits to 31058 proteins in 786 species: Archae - 62; Bacteria - 8761; Metazoa - 33547; Fungi - 17467; Plants - 10193; Viruses - 0; Other Eukaryotes - 10897 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G22710","AT2G22710.1","transposable element gene; similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G01980.1); similar to hypothetical protein 26.t00020 [Brassica oleracea] (GB:ABD65000.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT3G45660","AT3G45660.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate excretion transporter1 (TAIR:AT3G45650.1); Has 4308 Blast hits to 4237 proteins in 696 species: Archae - 0; Bacteria - 1162; Metazoa - 465; Fungi - 314; Plants - 2110; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G13277","AT3G13277.1","other RNA","other_rna",null,null," ",{"$nulls":6}," "]
["AT1G52780","AT1G52780.1","Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G03106","AT1G03106.1","unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G22510","AT2G22510.1","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G38080.1); Has 4670 Blast hits to 2256 proteins in 333 species: Archae - 29; Bacteria - 882; Metazoa - 845; Fungi - 279; Plants - 1271; Viruses - 397; Other Eukaryotes - 967 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G41280","AT2G41280.1","Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","protein_coding"," (M10)"," (ATM10); (M10)"," ",{"$nulls":6}," "]
["ATCG01050","ATCG01050.1","Represents a plastid-encoded subunit of a NAD(P)H dehydrogenase complex.  Its mRNA is edited at four positions.  Translation data is not available for this gene.","protein_coding"," (NDHD)"," (NDHD)"," ",{"$nulls":6}," "]
["ATCG01070","ATCG01070.1","NADH dehydrogenase ND4L","protein_coding"," (NDHE)"," (NDHE)"," ",{"$nulls":6}," "]
["ATCG01080","ATCG01080.1","NADH dehydrogenase ND6","protein_coding"," (NDHG)"," (NDHG)"," ",{"$nulls":6}," "]
["ATCG00590","ATCG00590.1","hypothetical protein","protein_coding"," (ORF31)"," (ORF31)"," ",{"$nulls":6}," "]
["AT1G19610","AT1G19610.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding"," (PDF1.4)"," (PDF1.4);LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78 (LCR78)"," ",{"$nulls":6}," "]
["ATCG00350","ATCG00350.1","Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome.","protein_coding"," (PSAA)"," (PSAA)"," ",{"$nulls":6}," "]
["ATCG01060","ATCG01060.1","Encodes the PsaC subunit of photosystem I.","protein_coding"," (PSAC)"," (PSAC)"," ",{"$nulls":6}," "]
["ATCG00410","ATCG00410.1","chloroplast TRNF","pre_trna"," (TRNF)"," (TRNF)"," ",{"$nulls":6}," "]
["ATCG00520","ATCG00520.1","Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth.","protein_coding"," (YCF4)"," (YCF4)"," ",{"$nulls":6}," "]
["AT5G23020","AT5G23020.1","methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2).  encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis.","protein_coding","2-ISOPROPYLMALATE SYNTHASE 2 (IMS2)"," (MAM3);2-ISOPROPYLMALATE SYNTHASE 2 (IMS2);METHYLTHIOALKYMALATE SYNTHASE-LIKE (MAM-L)"," ",{"$nulls":6}," "]
["ATCG00500","ATCG00500.1","Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.","protein_coding","ACETYL-COA CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA (ACCD)","ACETYL-COA CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA (ACCD)"," ",{"$nulls":6}," "]
["AT4G12550","AT4G12550.1","isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.","protein_coding","AUXIN-INDUCED IN ROOT CULTURES 1 (AIR1)","AUXIN-INDUCED IN ROOT CULTURES 1 (AIR1)"," ",{"$nulls":6}," "]
["AT3G20410","AT3G20410.1","calmodulin-domain protein kinase CDPK isoform 9 (CPK9)","protein_coding","CALMODULIN-DOMAIN PROTEIN KINASE 9 (CPK9)","CALMODULIN-DOMAIN PROTEIN KINASE 9 (CPK9)"," ",{"$nulls":6}," "]
["ATCG01120","ATCG01120.1","encodes a chloroplast ribosomal protein S15, a constituent of the small subunit of the ribosomal complex","protein_coding","CHLOROPLAST RIBOSOMAL PROTEIN S15 (RPS15)","CHLOROPLAST RIBOSOMAL PROTEIN S15 (RPS15)"," ",{"$nulls":6}," "]
["AT2G42530","AT2G42530.1","cold regulated 15b (COR15B); INVOLVED IN: response to cold, defense response to fungus; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cold-regulated 15a (TAIR:AT2G42540.2); Has 194 Blast hits to 148 proteins in 43 species: Archae - 0; Bacteria - 18; Metazoa - 5; Fungi - 6; Plants - 155; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding","COLD REGULATED 15B (COR15B)","COLD REGULATED 15B (COR15B)"," ",{"$nulls":6}," "]
["AT2G42540","AT2G42540.2","A cold-regulated gene whose product is targeted to the chloroplast. Cor15am  protects stromal proteins from aggregation under various stress conditions. Constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope.  Late Embryogenesis abundant protein (LEA).","protein_coding","COLD-REGULATED 15A (COR15A)"," (COR15);COLD-REGULATED 15A (COR15A)"," ",{"$nulls":6}," "]
["AT1G73602","AT1G73602.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF32 represents a conserved upstream opening reading frame relative to major ORF AT1G73600.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 32 (CPuORF32)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 32 (CPuORF32)"," ",{"$nulls":6}," "]
["AT1G02205","AT1G02205.3","Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.","protein_coding","ECERIFERUM 1 (CER1)","ECERIFERUM 1 (CER1)"," ",{"$nulls":6}," "]
["AT2G25490","AT2G25490.1","Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.","protein_coding","EIN3-BINDING F BOX PROTEIN 1 (EBF1)"," (FBL6);EIN3-BINDING F BOX PROTEIN 1 (EBF1)"," ",{"$nulls":6}," "]
["AT3G14210","AT3G14210.1","A semidominant QTL which has an epistatic effect on the Epithiospecifier gene. Represses nitrile formation and favors isothiocyanate production during glucosinolate hydrolysis. The functional allele deters the insect herbivory T. ni.","protein_coding","EPITHIOSPECIFIER MODIFIER 1 (ESM1)","EPITHIOSPECIFIER MODIFIER 1 (ESM1)"," ",{"$nulls":6}," "]
["AT3G23220","AT3G23220.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","ETHYLENE AND SALT INDUCIBLE 1 (ESE1)","ETHYLENE AND SALT INDUCIBLE 1 (ESE1)"," ",{"$nulls":6}," "]
["AT2G03090","AT2G03090.1","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","protein_coding","EXPANSIN A15 (EXPA15)","EXPANSIN A15 (ATEXPA15);EXPANSIN 15 (EXP15);EXPANSIN A15 (EXPA15); (ATHEXP ALPHA 1.3); (ATEXP15)"," ",{"$nulls":6}," "]
["AT4G28250","AT4G28250.1","putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","protein_coding","EXPANSIN B3 (EXPB3)","EXPANSIN B3 (ATEXPB3); (ATHEXP BETA 1.6);EXPANSIN B3 (EXPB3)"," ",{"$nulls":6}," "]
["AT4G26750","AT4G26750.1","hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","EXTENSIN-LIKE (EXT-like)","EXTENSIN-LIKE (EXT-like)"," ",{"$nulls":6}," "]
["AT2G19190","AT2G19190.1","Receptor-like protein kinase.  Involved in early defense signaling.","protein_coding","FLG22-INDUCED RECEPTOR-LIKE KINASE 1 (FRK1)","FLG22-INDUCED RECEPTOR-LIKE KINASE 1 (FRK1)"," ",{"$nulls":6}," "]
["AT3G03190","AT3G03190.1","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE F11 (GSTF11)","GLUTATHIONE S-TRANSFERASE F11 (ATGSTF11);GLUTATHIONE S-TRANSFERASE F11 (GSTF11);ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6 (ATGSTF6)"," ",{"$nulls":6}," "]
["AT1G01790","AT1G01790.1","K efflux antiporter KEA1","protein_coding","K+ EFFLUX ANTIPORTER 1 (KEA1)","K+ EFFLUX ANTIPORTER 1 (ATKEA1);K+ EFFLUX ANTIPORTER 1 (KEA1)"," ",{"$nulls":6}," "]
["AT3G45130","AT3G45130.1","lanosterol synthase 1 (LAS1); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: cycloartenol synthase 1 (TAIR:AT2G07050.1); Has 2160 Blast hits to 1916 proteins in 566 species: Archae - 4; Bacteria - 1015; Metazoa - 82; Fungi - 243; Plants - 610; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).","protein_coding","LANOSTEROL SYNTHASE 1 (LAS1)","LANOSTEROL SYNTHASE 1 (LAS1)"," ",{"$nulls":6}," "]
["AT1G75830","AT1G75830.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 67 (LCR67)","PLANT DEFENSIN 1.1 (PDF1.1);LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 67 (LCR67)"," ",{"$nulls":6}," "]
["AT2G02820","AT2G02820.2","Encodes a putative transcription factor (MYB88), involved in stomata development, double loss of MYB88 and FLP (MYB124) activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells.  This phenotype is enhanced in double mutants over the single mutant flp phenotype.","protein_coding","MYB DOMAIN PROTEIN 88 (MYB88)","MYB DOMAIN PROTEIN 88 (MYB88)"," ",{"$nulls":6}," "]
["AT4G26260","AT4G26260.2","Encodes a myo-inositol oxygenase.","protein_coding","MYO-INOSITOL OXYGENASE 4 (MIOX4)","MYO-INOSITOL OXYGENASE 4 (MIOX4)"," ",{"$nulls":6}," "]
["AT3G45650","AT3G45650.1","Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1).  Localized to the plasma membrane.  NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.","protein_coding","NITRATE EXCRETION TRANSPORTER1 (NAXT1)","NITRATE EXCRETION TRANSPORTER1 (NAXT1)"," ",{"$nulls":6}," "]
["AT2G19990","AT2G19990.1","Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis.  Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like.  Expression of this gene is not salicylic-acid responsive.","protein_coding","PATHOGENESIS-RELATED PROTEIN-1-LIKE (PR-1-LIKE)","PATHOGENESIS-RELATED PROTEIN-1-LIKE (PR-1-LIKE)"," ",{"$nulls":6}," "]
["ATCG00020","ATCG00020.1","Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core","protein_coding","PHOTOSYSTEM II REACTION CENTER PROTEIN A (PSBA)","PHOTOSYSTEM II REACTION CENTER PROTEIN A (PSBA)"," ",{"$nulls":6}," "]
["ATCG00680","ATCG00680.1","encodes for CP47, subunit of the photosystem II reaction center.","protein_coding","PHOTOSYSTEM II REACTION CENTER PROTEIN B (PSBB)","PHOTOSYSTEM II REACTION CENTER PROTEIN B (PSBB)"," ",{"$nulls":6}," "]
["ATCG00690","ATCG00690.1","Encodes photosystem II 5 kD protein subunit PSII-T. This is a plastid-encoded gene (PsbTc) which also has a nuclear-encoded paralog (PsbTn).","protein_coding","PHOTOSYSTEM II REACTION CENTER PROTEIN T (PSBT)","PHOTOSYSTEM II REACTION CENTER PROTEIN T (PSBT); (PSBTC)"," ",{"$nulls":6}," "]
["AT3G62680","AT3G62680.1","Proline-rich protein","protein_coding","PROLINE-RICH PROTEIN 3 (PRP3)","ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3 (ATPRP3);PROLINE-RICH PROTEIN 3 (PRP3)"," ",{"$nulls":6}," "]
["AT3G30720","AT3G30720.1","QUA-QUINE STARCH (QQS); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","QUA-QUINE STARCH (QQS)","QUA-QUINE STARCH (QQS)"," ",{"$nulls":6}," "]
["AT2G25470","AT2G25470.1","receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 21 (RLP21)","RECEPTOR LIKE PROTEIN 21 (AtRLP21);RECEPTOR LIKE PROTEIN 21 (RLP21)"," ",{"$nulls":6}," "]
["AT2G32660","AT2G32660.1","receptor like protein 22 (RLP22); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 72946 Blast hits to 23279 proteins in 925 species: Archae - 37; Bacteria - 3607; Metazoa - 12485; Fungi - 751; Plants - 51027; Viruses - 14; Other Eukaryotes - 5025 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 22 (RLP22)","RECEPTOR LIKE PROTEIN 22 (RLP22);RECEPTOR LIKE PROTEIN 22 (AtRLP22)"," ",{"$nulls":6}," "]
["AT1G67265","AT1G67265.1","ROTUNDIFOLIA like 21 (RTFL21); CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 18 (TAIR:AT5G16023.1); Has 118 Blast hits to 118 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","ROTUNDIFOLIA LIKE 21 (RTFL21)","DEVIL 3 (DVL3);ROTUNDIFOLIA LIKE 21 (RTFL21)"," ",{"$nulls":6}," "]
["AT1G78000","AT1G78000.1","Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.","protein_coding","SULFATE TRANSPORTER 1;2 (SULTR1;2)","SULFATE TRANSPORTER 1;2 (SULTR1;2);SELENATE RESISTANT 1 (SEL1)"," ",{"$nulls":6}," "]
["AT2G16950","AT2G16950.1","Nuclear import receptor for AtGRP7.","protein_coding","TRANSPORTIN 1 (TRN1)","TRANSPORTIN 1 (ATTRN1);TRANSPORTIN 1 (TRN1)"," ",{"$nulls":6}," "]
["The query for the following terms resulted in no hits: AT5G40451  ",{"$nulls":5}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
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[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G46080","AT5G46080.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: crinkly4 (TAIR:AT3G59420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT4G11000","AT4G11000.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G14480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G28400","AT2G28400.1","Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 318 Blast hits to 318 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","2.90e-30 ","28/74 (37.8%) ","422/30324 (1.4%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT2G36220 EDA39 RLP12 BZIP60 CRK11 MYB77 SCL13 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 ERF104 WRKY18"," "]
["AT1G36622","AT1G36622.1","unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36640.1); Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","8.31e-30 ","28/74 (37.8%) ","438/30324 (1.4%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT2G36220 EDA39 RLP12 BZIP60 CRK11 MYB77 SCL13 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 ERF104 WRKY18"," "]
["AT5G66675","AT5G66675.1","Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT2G18630.1); Has 241 Blast hits to 232 proteins in 16 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","1.16e-22 ","28/74 (37.8%) ","792/30324 (2.6%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT2G36220 EDA39 RLP12 BZIP60 CRK11 MYB77 SCL13 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 ERF104 WRKY18"," "]
["AT1G64065","AT1G64065.1","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G46150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","6.17e-18 ","33/74 (44.6%) ","1879/30324 (6.2%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT2G36220 EDA39 RLP12 BZIP60 CRK11 MYB77 AT1G11050 SCL13 AT4G28085 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 EXO70B1 AT1G63720 ERF104 WRKY18"," "]
["AT1G63720","AT1G63720.1","BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","1.52e-17 ","38/74 (51.4%) ","2805/30324 (9.3%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 CRK14 AT2G36220 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 AT4G28085 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18 WRKY28"," "]
["AT3G57640","AT3G57640.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65250.1); Has 19152 Blast hits to 18939 proteins in 410 species: Archae - 0; Bacteria - 70; Metazoa - 1065; Fungi - 99; Plants - 17549; Viruses - 14; Other Eukaryotes - 355 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","2.03e-17 ","36/74 (48.6%) ","2459/30324 (8.1%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 AT2G36220 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 AT4G28085 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18"," "]
["AT2G38790","AT2G38790.1","unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","4.45e-14 ","28/74 (37.8%) ","1667/30324 (5.5%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 CZF1 AT5G22690 AT5G35735 CRK14 EDA39 RLP12 BZIP60 CRK11 GGT1 SCL13 CMPG2 ZAR1 HSF A4A AT1G23710 AtIPCS2 GILP AT5G39020 HEMA2 AT1G50740 ERF104 BON1 WRKY18"," "]
["AT1G20823","AT1G20823.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1); Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2341; Fungi - 637; Plants - 4964; Viruses - 26; Other Eukaryotes - 1095 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","1.33e-13 ","23/74 (31.1%) ","1032/30324 (3.4%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 CZF1 AT5G35735 CRK14 EDA39 BZIP60 CRK11 GGT1 SCL13 CMPG2 HSF A4A AT1G23710 AtIPCS2 GILP AT5G39020 AT1G50740 BON1 WRKY18"," "]
["AT3G09020","AT3G09020.1","alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 364 Blast hits to 360 proteins in 67 species: Archae - 2; Bacteria - 16; Metazoa - 234; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","4.18e-13 ","38/74 (51.4%) ","3789/30324 (12.5%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 CRK14 AT2G36220 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 AT4G28085 CMPG2 AT3G25600 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18 WRKY28"," "]
["AT4G24110","AT4G24110.1","unknown protein; Has 76 Blast hits to 76 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007165 signal transduction ","P ","2.18e-11 ","25/74 (33.8%) ","1618/30324 (5.3%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT5G48657","AT5G48657.1","defense protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT3G07195.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035556 intracellular signal transduction ","P ","2.74e-11 ","15/74 (20.3%) ","400/30324 (1.3%) ","RPS2 AT3G09020 ERF11 AT5G66070 CZF1 EDA39 BZIP60 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 AT5G39020 EXO70B1"," "]
["AT1G23710","AT1G23710.1","Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 288 Blast hits to 282 proteins in 52 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 11; Plants - 191; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044700 single organism signaling ","P ","7.87e-11 ","25/74 (33.8%) ","1713/30324 (5.6%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT1G50740","AT1G50740.1","Transmembrane proteins 14C; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 412 Blast hits to 412 proteins in 97 species: Archae - 0; Bacteria - 35; Metazoa - 172; Fungi - 4; Plants - 187; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).","protein_coding",null,null," ","GO:0023052 signaling ","P ","7.97e-11 ","25/74 (33.8%) ","1714/30324 (5.7%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT5G35735","AT5G35735.1","Auxin-responsive family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT5G47530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031347 regulation of defense response ","P ","1.71e-10 ","16/74 (21.6%) ","549/30324 (1.8%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1 WRKY18"," "]
["AT3G15518","AT3G15518.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045730 respiratory burst ","P ","2.74e-10 ","10/74 (13.5%) ","122/30324 (0.4%) ","AT1G61360 AT3G09020 AT5G66070 CZF1 EDA39 BZIP60 SCL13 CMPG2 HSF A4A AT1G23710"," "]
["AT4G28085","AT4G28085.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002679 respiratory burst involved in defense response ","P ","2.74e-10 ","10/74 (13.5%) ","122/30324 (0.4%) ","AT1G61360 AT3G09020 AT5G66070 CZF1 EDA39 BZIP60 SCL13 CMPG2 HSF A4A AT1G23710"," "]
["AT1G11050","AT1G11050.1","Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050832 defense response to fungus ","P ","2.96e-10 ","14/74 (18.9%) ","383/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 EDA39 BZIP60 CRK11 CMPG2 AtIPCS2 AT5G39020 AT1G50740 ERF104 WRKY18"," "]
["AT2G36220","AT2G36220.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080134 regulation of response to stress ","P ","3.54e-10 ","16/74 (21.6%) ","576/30324 (1.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1 WRKY18"," "]
["AT1G70740","AT1G70740.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1); Has 118680 Blast hits to 117148 proteins in 4511 species: Archae - 101; Bacteria - 13535; Metazoa - 44165; Fungi - 9939; Plants - 33069; Viruses - 411; Other Eukaryotes - 17460 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009751 response to salicylic acid stimulus ","P ","4.69e-10 ","15/74 (20.3%) ","487/30324 (1.6%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 MYB77 SCL13 GILP AT5G39020 BON1 WRKY18"," "]
["AT1G75000","AT1G75000.1","GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT4G36830.1); Has 217 Blast hits to 217 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 53; Plants - 70; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009626 plant-type hypersensitive response ","P ","6.51e-10 ","14/74 (18.9%) ","406/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT5G36920","AT5G36920.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36925.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034050 host programmed cell death induced by symbiont ","P ","6.73e-10 ","14/74 (18.9%) ","407/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT2G05050","AT2G05050.1","Protein phosphatase 2C family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G08260.1); Has 3694 Blast hits to 3631 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 1048; Fungi - 338; Plants - 1876; Viruses - 3; Other Eukaryotes - 427 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010941 regulation of cell death ","P ","6.73e-10 ","14/74 (18.9%) ","407/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT4G08260","AT4G08260.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 4602 Blast hits to 4575 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 1217; Fungi - 464; Plants - 2203; Viruses - 5; Other Eukaryotes - 709 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048583 regulation of response to stimulus ","P ","8.50e-10 ","17/74 (23.0%) ","722/30324 (2.4%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 PFA-DSP3 AtIPCS2 GILP AT5G39020 AT1G50740 BON1 WRKY18"," "]
["AT5G66070","AT5G66070.2","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: NEP-interacting protein 2 (TAIR:AT2G17730.1); Has 9487 Blast hits to 9461 proteins in 285 species: Archae - 0; Bacteria - 10; Metazoa - 2332; Fungi - 815; Plants - 5049; Viruses - 44; Other Eukaryotes - 1237 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071310 cellular response to organic substance ","P ","9.69e-10 ","21/74 (28.4%) ","1261/30324 (4.2%) ","RPS2 CNGC13 AT3G09020 ERF11 TDR1 CZF1 AT5G35735 EDA39 BZIP60 CRK11 GGT1 AT1G11050 SCL13 PFA-DSP3 AT1G23710 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT5G39785","AT5G39785.2","FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e (InterPro:IPR008195), Protein of unknown function DUF1666 (InterPro:IPR012870); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1666) (TAIR:AT1G69610.1); Has 458 Blast hits to 427 proteins in 93 species: Archae - 0; Bacteria - 15; Metazoa - 64; Fungi - 53; Plants - 93; Viruses - 4; Other Eukaryotes - 229 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002682 regulation of immune system process ","P ","1.41e-09 ","14/74 (18.9%) ","430/30324 (1.4%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 WRKY18"," "]
["AT1G61360","AT1G61360.1","S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 125873 Blast hits to 123905 proteins in 4616 species: Archae - 126; Bacteria - 14038; Metazoa - 46183; Fungi - 10884; Plants - 35675; Viruses - 485; Other Eukaryotes - 18482 (source: NCBI BLink).","protein_coding",null,null," ","GO:0070887 cellular response to chemical stimulus ","P ","1.48e-09 ","22/74 (29.7%) ","1445/30324 (4.8%) ","RPS2 CNGC13 AT3G09020 ERF11 TDR1 CZF1 AT5G35735 EDA39 BZIP60 CRK11 GGT1 AT1G11050 SCL13 PFA-DSP3 AT1G23710 GILP ACS6 AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT5G54710","AT5G54710.1","Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G34050.1); Has 20807 Blast hits to 11728 proteins in 551 species: Archae - 16; Bacteria - 1568; Metazoa - 11429; Fungi - 1235; Plants - 2476; Viruses - 139; Other Eukaryotes - 3944 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","3.24e-09 ","13/74 (17.6%) ","367/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 GILP AT5G39020 BON1"," "]
["AT4G21920","AT4G21920.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","3.46e-09 ","13/74 (17.6%) ","369/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 GILP AT5G39020 BON1"," "]
["AT5G39020","AT5G39020.1","Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G39030.1); Has 113939 Blast hits to 112470 proteins in 4297 species: Archae - 118; Bacteria - 12172; Metazoa - 42643; Fungi - 9539; Plants - 32560; Viruses - 275; Other Eukaryotes - 16632 (source: NCBI BLink).","protein_coding",null,null," ","GO:0012501 programmed cell death ","P ","3.47e-09 ","14/74 (18.9%) ","460/30324 (1.5%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT5G54720","AT5G54720.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","3.97e-09 ","13/74 (17.6%) ","373/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT5G19240","AT5G19240.1","Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006612 protein targeting to membrane ","P ","4.53e-09 ","13/74 (17.6%) ","377/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT5G22690","AT5G22690.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46470.1); Has 15956 Blast hits to 11549 proteins in 387 species: Archae - 12; Bacteria - 480; Metazoa - 758; Fungi - 10; Plants - 14383; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink).","protein_coding",null,null," ","GO:0090150 establishment of protein localization to membrane ","P ","4.84e-09 ","13/74 (17.6%) ","379/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT2G35658","AT2G35658.2","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072657 protein localization to membrane ","P ","4.84e-09 ","13/74 (17.6%) ","379/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT2G40095","AT2G40095.1","Alpha/beta hydrolase related protein; CONTAINS InterPro DOMAIN/s: MENTAL domain (InterPro:IPR019498); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT3G55880.2); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007154 cell communication ","P ","5.28e-09 ","25/74 (33.8%) ","2073/30324 (6.8%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT3G25600","AT3G25600.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080135 regulation of cellular response to stress ","P ","6.28e-09 ","13/74 (17.6%) ","387/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT2G40140","AT2G40140.1","CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1); Has 1196 Blast hits to 1143 proteins in 183 species: Archae - 4; Bacteria - 47; Metazoa - 401; Fungi - 61; Plants - 441; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink).","protein_coding"," (CZF1)"," (ZFAR1); (CZF1); (ATSZF2);(SALT-INDUCIBLE ZINC FINGER 2 (SZF2)"," ","GO:0060548 negative regulation of cell death ","P ","9.17e-09 ","10/74 (13.5%) ","173/30324 (0.6%) ","RPS2 CNGC13 ERF11 CZF1 EDA39 BZIP60 AtIPCS2 GILP AT5G39020 BON1"," "]
["AT1G09940","AT1G09940.1","Encodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins","protein_coding"," (HEMA2)"," (HEMA2)"," ","GO:0043067 regulation of programmed cell death ","P ","9.19e-09 ","13/74 (17.6%) ","399/30324 (1.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT1G59590","AT1G59590.1","ZCF37 mRNA, complete cds","protein_coding"," (ZCF37)"," (ZCF37)"," ","GO:0016265 death ","P ","1.30e-08 ","14/74 (18.9%) ","508/30324 (1.7%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT2G20960","AT2G20960.1","pEARLI4; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT4G38560.1); Has 15842 Blast hits to 10281 proteins in 873 species: Archae - 33; Bacteria - 1976; Metazoa - 6640; Fungi - 3309; Plants - 1166; Viruses - 359; Other Eukaryotes - 2359 (source: NCBI BLink).","protein_coding"," (pEARLI4)"," (pEARLI4)"," ","GO:0008219 cell death ","P ","1.30e-08 ","14/74 (18.9%) ","508/30324 (1.7%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT5G64660","AT5G64660.1","CYS, MET, PRO, and GLY protein 2 (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","CYS, MET, PRO, AND GLY PROTEIN 2 (CMPG2)","CYS, MET, PRO, AND GLY PROTEIN 2 (CMPG2); (ATCMPG2)"," ","GO:0045088 regulation of innate immune response ","P ","2.01e-08 ","13/74 (17.6%) ","425/30324 (1.4%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT4G11280","AT4G11280.1","encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family","protein_coding","1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6 (ACS6)"," (ATACS6);1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6 (ACS6)"," ","GO:0050776 regulation of immune response ","P ","2.13e-08 ","13/74 (17.6%) ","427/30324 (1.4%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT4G22780","AT4G22780.1","Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding .","protein_coding","ACT DOMAIN REPEAT 7 (ACR7)","ACT DOMAIN REPEAT 7 (ACR7)"," ","GO:0045087 innate immune response ","P ","3.44e-08 ","17/74 (23.0%) ","914/30324 (3.0%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 CRK14 EDA39 BZIP60 CRK11 GGT1 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT2G37940","AT2G37940.1","Arabidopsis Inositol phosphorylceramide synthase 2 (AtIPCS2); BEST Arabidopsis thaliana protein match is: Arabidopsis Inositol phosphorylceramide synthase 1 (TAIR:AT3G54020.1); Has 438 Blast hits to 435 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 250; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).","protein_coding","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 2 (AtIPCS2)","ENHANCING RPW8-MEDIATED HR-LIKE CELL DEATH 1 (ERH1);ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 2 (AtIPCS2)"," ","GO:0006955 immune response ","P ","3.81e-08 ","17/74 (23.0%) ","920/30324 (3.0%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 CRK14 EDA39 BZIP60 CRK11 GGT1 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
["AT1G13210","AT1G13210.1","autoinhibited Ca2+/ATPase II (ACA.l); FUNCTIONS IN: calmodulin binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G25610.1); Has 13380 Blast hits to 11644 proteins in 1631 species: Archae - 144; Bacteria - 4268; Metazoa - 3224; Fungi - 2114; Plants - 1115; Viruses - 0; Other Eukaryotes - 2515 (source: NCBI BLink).","protein_coding","AUTOINHIBITED CA2+/ATPASE II (ACA.l)","AUTOINHIBITED CA2+/ATPASE II (ACA.l)"," ","GO:0009620 response to fungus ","P ","4.69e-08 ","14/74 (18.9%) ","560/30324 (1.8%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 EDA39 BZIP60 CRK11 CMPG2 AtIPCS2 AT5G39020 AT1G50740 ERF104 WRKY18"," "]
["AT1G42990","AT1G42990.1","bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.","protein_coding","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (ATBZIP60);BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60);BBASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)"," ","GO:0031348 negative regulation of defense response ","P ","4.92e-08 ","11/74 (14.9%) ","278/30324 (0.9%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G35735 EDA39 BZIP60 GGT1 GILP AT5G39020 BON1"," "]
["AT5G61900","AT5G61900.1","Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.","protein_coding","BONZAI 1 (BON1)"," (BON);BONZAI 1 (BON1);COPINE 1 (CPN1)"," ","GO:0002252 immune effector process ","P ","6.18e-08 ","11/74 (14.9%) ","284/30324 (0.9%) ","AT1G61360 AT3G09020 AT5G66070 CZF1 EDA39 BZIP60 SCL13 CMPG2 HSF A4A AT1G23710 WRKY18"," "]
["AT4G20780","AT4G20780.1","Calcium sensor involved in trichome branching.","protein_coding","CALMODULIN LIKE 42 (CML42)","CALMODULIN LIKE 42 (CML42)"," ","GO:0048585 negative regulation of response to stimulus ","P ","6.92e-08 ","12/74 (16.2%) ","373/30324 (1.2%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G35735 EDA39 BZIP60 GGT1 PFA-DSP3 GILP AT5G39020 BON1"," "]
["AT3G17690","AT3G17690.1","member of Cyclic nucleotide gated channel family","protein_coding","CYCLIC NUCLEOTIDE GATED CHANNEL 19 (CNGC19)","CYCLIC NUCLEOTIDE GATED CHANNEL 19 (CNGC19);CYCLIC NUCLEOTIDE-GATED CHANNEL 19 (ATCNGC19)"," ","GO:1901701 cellular response to oxygen-containing compound ","P ","8.48e-08 ","17/74 (23.0%) ","969/30324 (3.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 AT1G11050 SCL13 PFA-DSP3 GILP AT5G39020 EXO70B1 AT1G63720 BON1"," "]
["AT4G01010","AT4G01010.1","member of Cyclic nucleotide gated channel family","protein_coding","CYCLIC NUCLEOTIDE-GATED CHANNEL 13 (CNGC13)","CYCLIC NUCLEOTIDE-GATED CHANNEL 13 (CNGC13);CYCLIC NUCLEOTIDE-GATED CHANNEL 13 (ATCNGC13)"," ","GO:0051716 cellular response to stimulus ","P ","1.09e-07 ","27/74 (36.5%) ","2811/30324 (9.3%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP ACS6 AT5G39020 AT1G50740 EXO70B1 AT1G63720 BON1"," "]
["AT4G23190","AT4G23190.1","Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 11 (CRK11)","RECEPTOR LIKE PROTEIN KINASE 3 (AT-RLK3);CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 11 (CRK11)"," ","GO:0014070 response to organic cyclic compound ","P ","1.37e-07 ","16/74 (21.6%) ","860/30324 (2.8%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 MYB77 SCL13 GILP AT5G39020 BON1 WRKY18 WRKY28"," "]
["AT4G23220","AT4G23220.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 14 (CRK14)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 14 (CRK14)"," ","GO:0006950 response to stress ","P ","1.43e-07 ","32/74 (43.2%) ","4028/30324 (13.3%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 CZF1 AT5G22690 AT5G35735 CRK14 AT2G36220 EDA39 RLP12 BZIP60 CRK11 GGT1 SCL13 CMPG2 ZAR1 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP ACS6 AT5G39020 HEMA2 AT1G50740 AT1G63720 ERF104 BON1 WRKY18"," "]
["AT4G33050","AT4G33050.2","Encodes a calmodulin-binding protein involved in stomatal movement.","protein_coding","EMBRYO SAC DEVELOPMENT ARREST 39 (EDA39)","EMBRYO SAC DEVELOPMENT ARREST 39 (EDA39); (ATIQM1);IQ-MOTIF PROTEIN 1 (IQM1)"," ","GO:0050896 response to stimulus ","P ","2.00e-07 ","41/74 (55.4%) ","6619/30324 (21.8%) ","RPS2 AT1G61360 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G22690 AT5G35735 CRK14 AT2G36220 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 AT4G28085 CMPG2 ZAR1 AT3G25600 PFA-DSP3 HSF A4A AT4G24110 AT1G23710 AtIPCS2 GILP AT1G20823 ACS6 AT5G39020 HEMA2 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18 WRKY28"," "]
["AT1G28370","AT1G28370.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding","ERF DOMAIN PROTEIN 11 (ERF11)","ERF DOMAIN PROTEIN 11 (ATERF11);ERF DOMAIN PROTEIN 11 (ERF11)"," ","GO:0043069 negative regulation of programmed cell death ","P ","2.11e-07 ","9/74 (12.2%) ","169/30324 (0.6%) ","RPS2 CNGC13 ERF11 CZF1 EDA39 BZIP60 AtIPCS2 GILP AT5G39020"," "]
["AT5G61600","AT5G61600.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","ETHYLENE RESPONSE FACTOR 104 (ERF104)","ETHYLENE RESPONSE FACTOR 104 (ERF104)"," ","GO:0071407 cellular response to organic cyclic compound ","P ","4.84e-07 ","13/74 (17.6%) ","551/30324 (1.8%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 SCL13 GILP AT5G39020 BON1"," "]
["AT5G58430","AT5G58430.1","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","protein_coding","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (EXO70B1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (EXO70B1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (ATEXO70B1)"," ","GO:0009723 response to ethylene stimulus ","P ","7.56e-07 ","11/74 (14.9%) ","360/30324 (1.2%) ","ERF11 TDR1 BZIP60 MYB77 AT1G11050 SCL13 PFA-DSP3 AT1G23710 AtIPCS2 ACS6 AT1G63720"," "]
["AT5G59730","AT5G59730.1","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","protein_coding","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (EXO70H7)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (ATEXO70H7);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (EXO70H7)"," ","GO:0044802 single-organism membrane organization ","P ","8.45e-07 ","13/74 (17.6%) ","577/30324 (1.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT4G39640","AT4G39640.1","The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is  located in  vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.","protein_coding","GAMMA-GLUTAMYL TRANSPEPTIDASE 1 (GGT1)","GAMMA-GLUTAMYL TRANSPEPTIDASE 1 (GGT1)"," ","GO:0061024 membrane organization ","P ","8.45e-07 ","13/74 (17.6%) ","577/30324 (1.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
["AT5G13190","AT5G13190.1","Encodes a plasma membrane localized LITAF domain protein that interacts with LSD1 and acts as a negative regulation of hypersensitive cell death.","protein_coding","GSH-INDUCED LITAF DOMAIN PROTEIN (GILP)","GSH-INDUCED LITAF DOMAIN PROTEIN (GILP); (AtGILP)"," ","GO:0051707 response to other organism ","P ","2.00e-06 ","19/74 (25.7%) ","1535/30324 (5.1%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 CRK14 EDA39 RLP12 BZIP60 CRK11 GGT1 CMPG2 AtIPCS2 AT5G39020 AT1G50740 ERF104 BON1 WRKY18"," "]
["AT4G18880","AT4G18880.1","member of Heat Stress Transcription Factor (Hsf) family","protein_coding","HEAT SHOCK TRANSCRIPTION FACTOR  A4A (HSF A4A)","ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR  A4A (AT-HSFA4A);HEAT SHOCK TRANSCRIPTION FACTOR  A4A (HSF A4A)"," ","GO:0009607 response to biotic stimulus ","P ","2.02e-06 ","19/74 (25.7%) ","1536/30324 (5.1%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 CRK14 EDA39 RLP12 BZIP60 CRK11 GGT1 CMPG2 AtIPCS2 AT5G39020 AT1G50740 ERF104 BON1 WRKY18"," "]
["AT3G50950","AT3G50950.2","HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink).","protein_coding","HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)","HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)"," ","GO:0009755 hormone-mediated signaling pathway ","P ","4.28e-06 ","14/74 (18.9%) ","795/30324 (2.6%) ","RPS2 AT3G09020 ERF11 TDR1 EDA39 BZIP60 AT1G11050 SCL13 PFA-DSP3 AT1G23710 GILP AT5G39020 EXO70B1 AT1G63720"," "]
["AT3G26980","AT3G26980.1","membrane-anchored ubiquitin-fold protein 4 precursor (MUB4); CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin family protein (TAIR:AT4G24990.1); Has 168 Blast hits to 168 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR (MUB4)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR (MUB4)"," ","GO:0050794 regulation of cellular process ","P ","5.52e-06 ","30/74 (40.5%) ","4116/30324 (13.6%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18 WRKY28"," "]
["AT3G50060","AT3G50060.1","Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes.","protein_coding","MYB DOMAIN PROTEIN 77 (MYB77)","MYB DOMAIN PROTEIN 77 (MYB77)"," ","GO:0032870 cellular response to hormone stimulus ","P ","7.82e-06 ","14/74 (18.9%) ","834/30324 (2.8%) ","RPS2 AT3G09020 ERF11 TDR1 EDA39 BZIP60 AT1G11050 SCL13 PFA-DSP3 AT1G23710 GILP AT5G39020 EXO70B1 AT1G63720"," "]
["AT1G18300","AT1G18300.1","nudix hydrolase homolog 4 (NUDT4); FUNCTIONS IN: hydrolase activity; LOCATED IN: cytosol; EXPRESSED IN: stem, root, leaf; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 21 (TAIR:AT1G73540.1); Has 1264 Blast hits to 1263 proteins in 383 species: Archae - 1; Bacteria - 506; Metazoa - 249; Fungi - 131; Plants - 237; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).","protein_coding","NUDIX HYDROLASE HOMOLOG 4 (NUDT4)","NUDIX HYDROLASE HOMOLOG 4 (NUDT4);NUDIX HYDROLASE HOMOLOG 4 (atnudt4)"," ","GO:0071495 cellular response to endogenous stimulus ","P ","8.43e-06 ","14/74 (18.9%) ","839/30324 (2.8%) ","RPS2 AT3G09020 ERF11 TDR1 EDA39 BZIP60 AT1G11050 SCL13 PFA-DSP3 AT1G23710 GILP AT5G39020 EXO70B1 AT1G63720"," "]
["AT3G02800","AT3G02800.1","Encodes an atypical dual-speci&#64257;city phosphatase.","protein_coding","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 3 (PFA-DSP3)"," (AtPFA-DSP3);PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 3 (PFA-DSP3)"," ","GO:0043450 alkene biosynthetic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT1G14370","AT1G14370.1","Encodes protein kinase APK2a. Protein is N-myristoylated.","protein_coding","PROTEIN KINASE 2A (APK2A)","PBS1-LIKE 2 (PBL2);PROTEIN KINASE 2A (APK2A);KINASE 1 (KIN1)"," ","GO:1900673 olefin metabolic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT1G57990","AT1G57990.1","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","protein_coding","PURINE PERMEASE 18 (PUP18)","PURINE PERMEASE 18 (PUP18);PURINE PERMEASE 18 (ATPUP18)"," ","GO:1900674 olefin biosynthetic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT1G71400","AT1G71400.1","Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.","protein_coding","RECEPTOR LIKE PROTEIN 12 (RLP12)","RECEPTOR LIKE PROTEIN 12 (RLP12);RECEPTOR LIKE PROTEIN 12 (AtRLP12)"," ","GO:0043449 cellular alkene metabolic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT4G26090","AT4G26090.1","Encodes a plasma membrane protein with  leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2.  RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.","protein_coding","RESISTANT TO P. SYRINGAE 2 (RPS2)","RESISTANT TO P. SYRINGAE 2 (RPS2)"," ","GO:0009693 ethylene biosynthetic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT4G17230","AT4G17230.1","Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.","protein_coding","SCARECROW-LIKE 13 (SCL13)","SCARECROW-LIKE 13 (SCL13)"," ","GO:0009692 ethylene metabolic process ","P ","1.14e-05 ","7/74 (9.5%) ","120/30324 (0.4%) ","CNGC13 AT5G46080 BZIP60 AT1G11050 SCL13 ACS6 ERF104"," "]
["AT3G23230","AT3G23230.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","TRANSCRIPTIONAL REGULATOR OF DEFENSE RESPONSE 1 (TDR1)","TRANSCRIPTIONAL REGULATOR OF DEFENSE RESPONSE 1 (TDR1); (ATERF98);ETHYLENE RESPONSE FACTOR 98 (ERF98); (ATTDR1)"," ","GO:0009753 response to jasmonic acid stimulus ","P ","1.54e-05 ","11/74 (14.9%) ","482/30324 (1.6%) ","RPS2 AT3G09020 ERF11 EDA39 BZIP60 SCL13 AT4G28085 GILP ACS6 AT5G39020 AT1G63720"," "]
["AT4G31800","AT4G31800.1","Pathogen-induced transcription factor. Binds W-box sequences  in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18  enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both  P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.","protein_coding","WRKY DNA-BINDING PROTEIN 18 (WRKY18)","WRKY DNA-BINDING PROTEIN 18 (WRKY18);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18 (ATWRKY18)"," ","GO:0009725 response to hormone stimulus ","P ","4.35e-05 ","18/74 (24.3%) ","1662/30324 (5.5%) ","RPS2 AT3G09020 ERF11 TDR1 EDA39 BZIP60 MYB77 AT1G11050 SCL13 AT4G28085 PFA-DSP3 AT1G23710 AtIPCS2 GILP ACS6 AT5G39020 EXO70B1 AT1G63720"," "]
["AT4G18170","AT4G18170.1","member of WRKY Transcription Factor; Group II-c.  Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3.","protein_coding","WRKY DNA-BINDING PROTEIN 28 (WRKY28)"," (AtWRKY28);WRKY DNA-BINDING PROTEIN 28 (WRKY28)"," ","GO:0051704 multi-organism process ","P ","6.34e-05 ","19/74 (25.7%) ","1905/30324 (6.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 CRK14 EDA39 RLP12 BZIP60 CRK11 GGT1 CMPG2 AtIPCS2 AT5G39020 AT1G50740 ERF104 BON1 WRKY18"," "]
[{"$nulls":6}," ","GO:0009814 defense response, incompatible interaction ","P ","9.81e-05 ","11/74 (14.9%) ","579/30324 (1.9%) ","RPS2 AT3G09020 ERF11 AT5G35735 CRK14 EDA39 BZIP60 CRK11 GGT1 AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0009627 systemic acquired resistance ","P ","1.10e-04 ","10/74 (13.5%) ","460/30324 (1.5%) ","RPS2 AT3G09020 ERF11 AT5G35735 CRK14 EDA39 BZIP60 GGT1 AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0006605 protein targeting ","P ","1.40e-04 ","13/74 (17.6%) ","892/30324 (2.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","1.69e-04 ","8/74 (10.8%) ","264/30324 (0.9%) ","RPS2 AT3G09020 ERF11 AT5G35735 EDA39 BZIP60 GGT1 AT5G39020"," "]
[{"$nulls":6}," ","GO:0065007 biological regulation ","P ","2.12e-04 ","32/74 (43.2%) ","5410/30324 (17.8%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT5G39020 AT5G19240 AT1G50740 EXO70B1 AT1G63720 pEARLI4 ERF104 BON1 WRKY18 WRKY28"," "]
[{"$nulls":6}," ","GO:0030968 endoplasmic reticulum unfolded protein response ","P ","2.31e-04 ","7/74 (9.5%) ","186/30324 (0.6%) ","ERF11 CZF1 EDA39 BZIP60 CRK11 GILP AT1G50740"," "]
[{"$nulls":6}," ","GO:0035967 cellular response to topologically incorrect protein ","P ","2.48e-04 ","7/74 (9.5%) ","188/30324 (0.6%) ","ERF11 CZF1 EDA39 BZIP60 CRK11 GILP AT1G50740"," "]
[{"$nulls":6}," ","GO:0034620 cellular response to unfolded protein ","P ","2.48e-04 ","7/74 (9.5%) ","188/30324 (0.6%) ","ERF11 CZF1 EDA39 BZIP60 CRK11 GILP AT1G50740"," "]
[{"$nulls":6}," ","GO:0006986 response to unfolded protein ","P ","2.48e-04 ","7/74 (9.5%) ","188/30324 (0.6%) ","ERF11 CZF1 EDA39 BZIP60 CRK11 GILP AT1G50740"," "]
[{"$nulls":6}," ","GO:0006984 ER-nucleus signaling pathway ","P ","3.07e-04 ","7/74 (9.5%) ","194/30324 (0.6%) ","ERF11 CZF1 EDA39 BZIP60 CRK11 GILP AT1G50740"," "]
[{"$nulls":6}," ","GO:0050789 regulation of biological process ","P ","3.09e-04 ","30/74 (40.5%) ","4911/30324 (16.2%) ","RPS2 CNGC13 AT3G09020 ERF11 AT5G66070 TDR1 CZF1 AT5G35735 EDA39 RLP12 BZIP60 CRK11 GGT1 MYB77 AT1G11050 SCL13 CMPG2 PFA-DSP3 HSF A4A AT1G23710 AtIPCS2 GILP AT5G39020 AT1G50740 EXO70B1 AT1G63720 ERF104 BON1 WRKY18 WRKY28"," "]
[{"$nulls":6}," ","GO:0006886 intracellular protein transport ","P ","3.12e-04 ","13/74 (17.6%) ","957/30324 (3.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0009867 jasmonic acid mediated signaling pathway ","P ","3.63e-04 ","8/74 (10.8%) ","292/30324 (1.0%) ","RPS2 AT3G09020 ERF11 EDA39 BZIP60 SCL13 GILP AT5G39020"," "]
[{"$nulls":6}," ","GO:0071395 cellular response to jasmonic acid stimulus ","P ","3.63e-04 ","8/74 (10.8%) ","292/30324 (1.0%) ","RPS2 AT3G09020 ERF11 EDA39 BZIP60 SCL13 GILP AT5G39020"," "]
[{"$nulls":6}," ","GO:0034613 cellular protein localization ","P ","3.93e-04 ","13/74 (17.6%) ","977/30324 (3.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0015031 protein transport ","P ","5.16e-04 ","13/74 (17.6%) ","1001/30324 (3.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0045184 establishment of protein localization ","P ","5.16e-04 ","13/74 (17.6%) ","1001/30324 (3.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0009697 salicylic acid biosynthetic process ","P ","5.22e-04 ","7/74 (9.5%) ","210/30324 (0.7%) ","RPS2 CNGC13 AT3G09020 CRK14 EDA39 AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0070727 cellular macromolecule localization ","P ","5.76e-04 ","13/74 (17.6%) ","1011/30324 (3.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0051649 establishment of localization in cell ","P ","6.75e-04 ","15/74 (20.3%) ","1389/30324 (4.6%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 EXO70H7 EXO70B1"," "]
[{"$nulls":6}," ","GO:0000165 MAPK cascade ","P ","7.57e-04 ","7/74 (9.5%) ","222/30324 (0.7%) ","RPS2 AT3G09020 ERF11 EDA39 BZIP60 PFA-DSP3 AT5G39020"," "]
[{"$nulls":6}," ","GO:0009696 salicylic acid metabolic process ","P ","7.80e-04 ","7/74 (9.5%) ","223/30324 (0.7%) ","RPS2 CNGC13 AT3G09020 CRK14 EDA39 AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0007243 intracellular protein kinase cascade ","P ","8.04e-04 ","7/74 (9.5%) ","224/30324 (0.7%) ","RPS2 AT3G09020 ERF11 EDA39 BZIP60 PFA-DSP3 AT5G39020"," "]
[{"$nulls":6}," ","GO:0008104 protein localization ","P ","9.54e-04 ","13/74 (17.6%) ","1058/30324 (3.5%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0033554 cellular response to stress ","P ","1.41e-03 ","15/74 (20.3%) ","1474/30324 (4.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 CRK11 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 BON1"," "]
[{"$nulls":6}," ","GO:0048519 negative regulation of biological process ","P ","1.54e-03 ","14/74 (18.9%) ","1290/30324 (4.3%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 GGT1 PFA-DSP3 AtIPCS2 GILP AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0051641 cellular localization ","P ","1.54e-03 ","15/74 (20.3%) ","1485/30324 (4.9%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740 EXO70H7 EXO70B1"," "]
[{"$nulls":6}," ","GO:0042537 benzene-containing compound metabolic process ","P ","2.16e-03 ","7/74 (9.5%) ","260/30324 (0.9%) ","RPS2 CNGC13 AT3G09020 CRK14 EDA39 AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0048523 negative regulation of cellular process ","P ","2.47e-03 ","11/74 (14.9%) ","806/30324 (2.7%) ","RPS2 CNGC13 ERF11 CZF1 EDA39 BZIP60 PFA-DSP3 AtIPCS2 GILP AT5G39020 BON1"," "]
[{"$nulls":6}," ","GO:0033036 macromolecule localization ","P ","2.60e-03 ","14/74 (18.9%) ","1350/30324 (4.5%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 HEMA2 AT1G50740"," "]
[{"$nulls":6}," ","GO:0002237 response to molecule of bacterial origin ","P ","3.41e-03 ","5/74 (6.8%) ","103/30324 (0.3%) ","CRK14 EDA39 RLP12 AT5G39020 WRKY18"," "]
[{"$nulls":6}," ","GO:0046907 intracellular transport ","P ","6.58e-03 ","13/74 (17.6%) ","1264/30324 (4.2%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP AT5G39020 AT1G50740"," "]
[{"$nulls":6}," ","GO:0071702 organic substance transport ","P ","6.75e-03 ","15/74 (20.3%) ","1678/30324 (5.5%) ","RPS2 CNGC13 AT3G09020 ERF11 CZF1 AT5G35735 EDA39 BZIP60 SCL13 AtIPCS2 GILP PUP18 AT5G39020 AT1G50740 WRKY28"," "]
[{"$nulls":6}," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","7.33e-03 ","9/74 (12.2%) ","580/30324 (1.9%) ","RPS2 CNGC13 AT3G09020 CRK14 EDA39 AT5G39020 AT5G19240 pEARLI4 BON1"," "]
[{"$nulls":6}," ","GO:0009873 ethylene mediated signaling pathway ","P ","9.83e-03 ","5/74 (6.8%) ","128/30324 (0.4%) ","ERF11 TDR1 BZIP60 SCL13 AT1G23710"," "]
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{"sheet":"19","index":19,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G19120","AT5G19120.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT1G50040","AT1G50040.1","Protein of unknown function (DUF1005); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf apex, leaf whorl, root, petiole, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT3G19680.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 137; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G69570","AT1G69570.1","Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G26790.1); Has 1305 Blast hits to 1151 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 16; Fungi - 10; Plants - 1107; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009725 response to hormone stimulus ","P ","1.16e-08 ","27/107 (25.2%) ","1662/30324 (5.5%) ","EPR1 ARR9 BRH1 GLK2 HBI1 SAUR29 EBF2 MYB59 NAC083 TMM AT2G46690 HB-12 AT4G34770 ATAUX2-11 KMD1 AT5G55620 RAP2.6 RD26 DFL2 AT4G34750 CIPK20 AT1G29420 AUF1 BBX14 CGA1 MYB16 BT4"," "]
["AT2G43340","AT2G43340.1","Protein of unknown function (DUF1685); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G31560.2); Has 272 Blast hits to 272 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","1.83e-07 ","27/107 (25.2%) ","1879/30324 (6.2%) ","EPR1 ARR9 BRH1 GLK2 HBI1 SAUR29 EBF2 MYB59 NAC083 TMM AT2G46690 HB-12 AT4G34770 ATAUX2-11 KMD1 AT5G55620 RAP2.6 RD26 DFL2 AT4G34750 CIPK20 AT1G29420 AUF1 BBX14 CGA1 MYB16 BT4"," "]
["AT5G21940","AT5G21940.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","1.56e-05 ","30/107 (28.0%) ","2805/30324 (9.3%) ","AT4G10910 EPR1 ARR9 BRH1 GLK2 HBI1 AT2G17880 SAUR29 EBF2 MYB59 NAC083 TMM AT2G46690 HB-12 AT4G34770 ATAUX2-11 KMD1 AT5G55620 RAP2.6 RD26 DFL2 AT4G34750 CIPK20 AFB3 AT1G29420 AUF1 BBX14 CGA1 MYB16 BT4"," "]
["AT1G23390","AT1G23390.1","Kelch repeat-containing F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G24760.1); Has 146 Blast hits to 146 proteins in 15 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009733 response to auxin stimulus ","P ","4.09e-05 ","12/107 (11.2%) ","442/30324 (1.5%) ","SAUR29 MYB59 AT2G46690 AT4G34770 ATAUX2-11 RD26 DFL2 AT4G34750 AT1G29420 AUF1 MYB16 BT4"," "]
["AT5G61590","AT5G61590.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","1.02e-04 ","34/107 (31.8%) ","3789/30324 (12.5%) ","AT4G10910 EPR1 ARR9 BRH1 GLK2 HBI1 AT2G17880 SAUR29 EBF2 MYB59 NAC083 TMM AT2G46690 HB-12 AT4G34770 ATAUX2-11 KMD1 AT5G55620 RAP2.6 FBH4 RD26 AT5G61590 DFL2 AT4G34750 OXS3 CIPK20 MAX2 AFB3 AT1G29420 AUF1 BBX14 CGA1 MYB16 BT4"," "]
["AT3G19680","AT3G19680.1","Protein of unknown function (DUF1005); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G50040.1); Has 782 Blast hits to 189 proteins in 38 species: Archae - 0; Bacteria - 22; Metazoa - 12; Fungi - 23; Plants - 137; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031326 regulation of cellular biosynthetic process ","P ","2.64e-04 ","24/107 (22.4%) ","2150/30324 (7.1%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT2G25200","AT2G25200.1","Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT5G11000.1); Has 283 Blast hits to 283 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 283; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033993 response to lipid ","P ","2.93e-04 ","15/107 (14.0%) ","867/30324 (2.9%) ","ARR9 BRH1 GLK2 MYB59 NAC083 TMM HB-12 RAP2.6 RD26 DFL2 CIPK20 AUF1 CGA1 MYB16 BT4"," "]
["AT3G07350","AT3G07350.1","Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009889 regulation of biosynthetic process ","P ","6.52e-04 ","24/107 (22.4%) ","2261/30324 (7.5%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT5G44680","AT5G44680.1","DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink).","protein_coding",null,null," ","GO:2000112 regulation of cellular macromolecule biosynthetic process ","P ","6.82e-04 ","23/107 (21.5%) ","2101/30324 (6.9%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT4G10910","AT4G10910.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010556 regulation of macromolecule biosynthetic process ","P ","6.82e-04 ","23/107 (21.5%) ","2101/30324 (6.9%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT1G11175","AT1G11175.1","other RNA","other_rna",null,null," ","GO:0051171 regulation of nitrogen compound metabolic process ","P ","9.66e-04 ","23/107 (21.5%) ","2144/30324 (7.1%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT5G01740","AT5G01740.1","Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: senescence associated gene 20 (TAIR:AT3G10985.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010468 regulation of gene expression ","P ","9.83e-04 ","24/107 (22.4%) ","2314/30324 (7.6%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT2G23690","AT2G23690.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:2001141 regulation of RNA biosynthetic process ","P ","9.90e-04 ","22/107 (20.6%) ","1983/30324 (6.5%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT5G55620","AT5G55620.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006355 regulation of transcription, DNA-dependent ","P ","9.90e-04 ","22/107 (20.6%) ","1983/30324 (6.5%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT1G80440","AT1G80440.1","Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G15670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051252 regulation of RNA metabolic process ","P ","1.08e-03 ","22/107 (20.6%) ","1993/30324 (6.6%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT1G69760","AT1G69760.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26920.1); Has 51 Blast hits to 51 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031323 regulation of cellular metabolic process ","P ","2.61e-03 ","24/107 (22.4%) ","2447/30324 (8.1%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT2G46690","AT2G46690.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT3G61900.1); Has 1291 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1290; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019219 regulation of nucleobase-containing compound metabolic process ","P ","2.73e-03 ","22/107 (20.6%) ","2110/30324 (7.0%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT3G52070","AT3G52070.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0060255 regulation of macromolecule metabolic process ","P ","3.54e-03 ","24/107 (22.4%) ","2491/30324 (8.2%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 CGA1 MYB20 MYB16 BT4"," "]
["AT5G57760","AT5G57760.1","unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006351 transcription, DNA-dependent ","P ","5.10e-03 ","22/107 (20.6%) ","2194/30324 (7.2%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT5G03230","AT5G03230.1","Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT5G60680.1); Has 326 Blast hits to 326 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 324; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0032774 RNA biosynthetic process ","P ","5.13e-03 ","22/107 (20.6%) ","2195/30324 (7.2%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT1G76220","AT1G76220.1","Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 446 Blast hits to 436 proteins in 35 species: Archae - 3; Bacteria - 10; Metazoa - 14; Fungi - 2; Plants - 400; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009735 response to cytokinin stimulus ","P ","6.58e-03 ","6/107 (5.6%) ","136/30324 (0.4%) ","ARR9 HBI1 ATAUX2-11 KMD1 AUF1 CGA1"," "]
["AT3G44120","AT3G44120.1","F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G07140.2); Has 1417 Blast hits to 1367 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1415; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080090 regulation of primary metabolic process ","P ","7.79e-03 ","23/107 (21.5%) ","2430/30324 (8.0%) ","EPR1 AT2G28200 ARR9 AT1G69570 GLK2 HBI1 MYB59 NAC083 HB-12 ATAUX2-11 PRR5 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 PAR1 BBX14 MYB20 MYB16 BT4"," "]
["AT4G34770","AT4G34770.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G17880","AT2G17880.1","Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species: Archae - 135; Bacteria - 8632; Metazoa - 3284; Fungi - 1660; Plants - 1836; Viruses - 5; Other Eukaryotes - 4125 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT3G26510","AT3G26510.5","Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT1G50290","AT1G50290.1","unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G43675","AT1G43675.1","similarity to non-LTR retroelement protein","transposable_element_gene",null,null," ","GO:0005634 nucleus ","C ","3.20e-03 ","56/107 (52.3%) ","9465/30324 (31.2%) ","AT4G10910 EPR1 AT2G28200 AT3G23880 AT2G47440 ARR9 BRH1 AT1G69570 AT5G21940 AT4G28240 GLK2 HBI1 AT1G23390 AT2G38820 EBF2 MYB59 COL2 NAC083 AT2G20670 HB-12 ATAUX2-11 KMD1 PRR5 AT5G44680 BEE3 PP2-A12 OZF2 RAP2.6 FBH4 AT3G10120 RD26 AT5G61590 AT4G26288 KMD3 AT5G03230 AT5G19190 AT1G50040 TZF5 AT4G34750 OXS3 RTFL8 AT3G26510 FBS2 MAX2 BRG3 AFB3 PAR1 CPuORF60 AUF1 BBX14 AT4G14620 AT2G43340 AT1G69760 CGA1 MYB20 MYB16"," "]
["AT2G28200","AT2G28200.1","C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G18810","AT1G18810.1","phytochrome kinase substrate-related; BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 458 Blast hits to 394 proteins in 45 species: Archae - 0; Bacteria - 2; Metazoa - 60; Fungi - 9; Plants - 109; Viruses - 2; Other Eukaryotes - 276 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT5G42680","AT5G42680.1","Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT4G39610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT1G72645","AT1G72645.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT3G10120","AT3G10120.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0003700 sequence-specific DNA binding transcription factor activity ","F ","2.38e-04 ","21/107 (19.6%) ","1669/30324 (5.5%) ","EPR1 AT2G28200 AT1G69570 GLK2 HBI1 MYB59 COL2 NAC083 HB-12 ATAUX2-11 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 BBX14 CGA1 MYB20 MYB16"," "]
["AT2G44130","AT2G44130.1","Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G59940.1); Has 5544 Blast hits to 3569 proteins in 209 species: Archae - 8; Bacteria - 363; Metazoa - 3928; Fungi - 26; Plants - 960; Viruses - 5; Other Eukaryotes - 254 (source: NCBI BLink).","protein_coding",null,null," ","GO:0001071 nucleic acid binding transcription factor activity ","F ","2.40e-04 ","21/107 (19.6%) ","1670/30324 (5.5%) ","EPR1 AT2G28200 AT1G69570 GLK2 HBI1 MYB59 COL2 NAC083 HB-12 ATAUX2-11 BEE3 OZF2 RAP2.6 FBH4 RD26 AT5G61590 TZF5 BBX14 CGA1 MYB20 MYB16"," "]
["AT3G06070","AT3G06070.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G62930","AT3G62930.1","Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT1G49470","AT1G49470.1","Family of unknown function (DUF716) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF716)  (TAIR:AT1G55230.1); Has 395 Blast hits to 395 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 236; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G79160","AT1G79160.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G39080","AT5G39080.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39050.1); Has 2008 Blast hits to 1990 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 1965; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G20670","AT2G20670.1","Protein of unknown function (DUF506) ; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G47440","AT2G47440.1","Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G26288","AT4G26288.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G23880","AT3G23880.1","F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G06240.1); Has 2315 Blast hits to 2300 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2313; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G78450","AT1G78450.1","SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G17100.1); Has 640 Blast hits to 629 proteins in 68 species: Archae - 2; Bacteria - 20; Metazoa - 147; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G38825","AT4G38825.1","SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G18030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G18320","AT3G18320.1","F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G44120.1); Has 1386 Blast hits to 879 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G14560","AT3G14560.1","unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G18300","AT2G18300.3","basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cytokinin stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 2 (TAIR:AT4G36540.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G28240","AT4G28240.1","Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G49220","AT1G49220.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 8983 Blast hits to 8960 proteins in 282 species: Archae - 0; Bacteria - 0; Metazoa - 2327; Fungi - 545; Plants - 4884; Viruses - 52; Other Eukaryotes - 1175 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G29420","AT1G29420.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT1G29510.1); Has 732 Blast hits to 717 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 732; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G34750","AT4G34750.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G10990.1); Has 1347 Blast hits to 1333 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1346; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G74940","AT1G74940.1","Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G19200.1); Has 483 Blast hits to 483 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 483; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G40230","AT2G40230.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G27620.1); Has 2517 Blast hits to 2503 proteins in 143 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 52; Plants - 2458; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G13540","AT4G13540.1","unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","RD26"]
["AT5G19190","AT5G19190.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","BEE3"]
["AT5G62280","AT5G62280.1","Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT2G45360.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","VNI2"]
["AT5G67390","AT5G67390.1","unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","MYB20"]
["AT4G14620","AT4G14620.1","Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT3G22970.1); Has 402 Blast hits to 400 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","At1g68520"]
["AT4G28290","AT4G28290.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","At2g18300"]
["AT5G44260","AT5G44260.1","Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G03790.1); Has 1182 Blast hits to 968 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 415; Fungi - 15; Plants - 396; Viruses - 3; Other Eukaryotes - 353 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","At1g69570"]
["AT2G38820","AT2G38820.2","Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT3G22970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," ","At5g61590"]
["AT1G52140","AT1G52140.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G68520","AT1G68520.1","B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G25440.1); Has 3472 Blast hits to 2352 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 1; Plants - 3365; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G26200","AT5G26200.1","Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G72820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G43700","AT5G43700.1","Auxin inducible protein similar to transcription factors.","protein_coding","AUXIN INDUCIBLE 2-11 (ATAUX2-11)","INDOLE-3-ACETIC ACID INDUCIBLE 4 (IAA4);AUXIN INDUCIBLE 2-11 (ATAUX2-11)"," ",{"$nulls":6}," "]
["AT1G12820","AT1G12820.1","Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.","protein_coding","AUXIN SIGNALING F-BOX 3 (AFB3)","AUXIN SIGNALING F-BOX 3 (AFB3)"," ",{"$nulls":6}," "]
["AT1G78100","AT1G78100.1","F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G22220.1); Has 149 Blast hits to 148 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","AUXIN UP-REGULATED F-BOX PROTEIN 1 (AUF1)","AUXIN UP-REGULATED F-BOX PROTEIN 1 (AUF1)"," ",{"$nulls":6}," "]
["AT3G12920","AT3G12920.1","Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","protein_coding","BOI-RELATED GENE 3 (BRG3)","BOI-RELATED GENE 3 (BRG3)"," ",{"$nulls":6}," "]
["AT1G73830","AT1G73830.1","BR enhanced expression 3 (BEE3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2141 Blast hits to 2133 proteins in 100 species: Archae - 0; Bacteria - 4; Metazoa - 8; Fungi - 37; Plants - 2087; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding","BR ENHANCED EXPRESSION 3 (BEE3)","BR ENHANCED EXPRESSION 3 (BEE3)"," ",{"$nulls":6}," "]
["AT3G30180","AT3G30180.1","Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide.  It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring.  The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.","protein_coding","BRASSINOSTEROID-6-OXIDASE 2 (BR6OX2)","BRASSINOSTEROID-6-OXIDASE 2 (BR6OX2); (CYP85A2)"," ",{"$nulls":6}," "]
["AT3G61460","AT3G61460.1","Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.","protein_coding","BRASSINOSTEROID-RESPONSIVE RING-H2 (BRH1)","BRASSINOSTEROID-RESPONSIVE RING-H2 (BRH1)"," ",{"$nulls":6}," "]
["AT5G67480","AT5G67480.2","BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","protein_coding","BTB AND TAZ DOMAIN PROTEIN 4 (BT4)","BTB AND TAZ DOMAIN PROTEIN 4 (BT4)"," ",{"$nulls":6}," "]
["AT5G45820","AT5G45820.1","Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.","protein_coding","CBL-INTERACTING PROTEIN KINASE 20 (CIPK20)","PROTEIN KINASE 18 (PKS18);CBL-INTERACTING PROTEIN KINASE 20 (CIPK20);SNF1-RELATED PROTEIN KINASE 3.6 (SnRK3.6)"," ",{"$nulls":6}," "]
["AT4G14622","AT4G14622.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF60 represents a conserved upstream opening reading frame relative to major ORF AT4G14620.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 60 (CPuORF60)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 60 (CPuORF60)"," ",{"$nulls":6}," "]
["AT3G02380","AT3G02380.1","homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins","protein_coding","CONSTANS-LIKE 2 (COL2)","CONSTANS-LIKE 2 (ATCOL2);CONSTANS-LIKE 2 (COL2)"," ",{"$nulls":6}," "]
["AT4G26150","AT4G26150.1","Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.","protein_coding","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1)","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1);GNC-LIKE (GNL);GATA TRANSCRIPTION FACTOR 22 (GATA22)"," ",{"$nulls":6}," "]
["AT4G03400","AT4G03400.1","Encodes a GH3-related gene involved in red light-specific hypocotyl elongation.  Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","protein_coding","DWARF IN LIGHT 2 (DFL2)"," (GH3-10);DWARF IN LIGHT 2 (DFL2)"," ",{"$nulls":6}," "]
["AT1G18330","AT1G18330.2","EARLY-PHYTOCHROME-RESPONSIVE1","protein_coding","EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1)","REVEILLE 7 (RVE7);EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1)"," ",{"$nulls":6}," "]
["AT5G25350","AT5G25350.1","Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.","protein_coding","EIN3-BINDING F BOX PROTEIN 2 (EBF2)","EIN3-BINDING F BOX PROTEIN 2 (EBF2)"," ",{"$nulls":6}," "]
["AT4G21510","AT4G21510.1","F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","F-BOX STRESS INDUCED 2 (FBS2)"," (ATFBS2);F-BOX STRESS INDUCED 2 (FBS2)"," ",{"$nulls":6}," "]
["AT2G42280","AT2G42280.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","FLOWERING BHLH 4 (FBH4)","FLOWERING BHLH 4 (FBH4)"," ",{"$nulls":6}," "]
["AT5G44190","AT5G44190.1","Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner.  GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.","protein_coding","GOLDEN2-LIKE 2 (GLK2)","GOLDEN2-LIKE 2 (GLK2);GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 (GPRI2); (ATGLK2)"," ",{"$nulls":6}," "]
["AT3G61890","AT3G61890.1","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.","protein_coding","HOMEOBOX 12 (HB-12)","HOMEOBOX 12 (ATHB-12);HOMEOBOX 12 (HB-12);ARABIDOPSIS THALIANA HOMEOBOX 12 (ATHB12)"," ",{"$nulls":6}," "]
["AT4G15550","AT4G15550.1","UDP-glucose:indole-3-acetate beta-D-glucosyltransferase","protein_coding","INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE (IAGLU)","INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE (IAGLU)"," ",{"$nulls":6}," "]
["AT4G37540","AT4G37540.1","LOB domain-containing protein 39 (LBD39); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 571 Blast hits to 570 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 571; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","LOB DOMAIN-CONTAINING PROTEIN 39 (LBD39)","LOB DOMAIN-CONTAINING PROTEIN 39 (LBD39)"," ",{"$nulls":6}," "]
["AT1G31173","AT1G31173.1","Encodes a microRNA that targets ARF family members ARF6 and ARF8.  MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UGAAGCUGCCAGCAUGAUCUGG","miRNA","MICRORNA167D (MIR167D)","MICRORNA167D (MIR167D)"," ",{"$nulls":6}," "]
["AT2G42620","AT2G42620.1","The mutations at  MAX2 cause increased hypocotyl and petiole elongation in  light-grown seedlings. Positional cloning identifies MAX2  as a member of the F-box leucine-rich repeat family of  proteins. MAX2 is identical to ORE9, a proposed regulator  of leaf senescence. Involved in positive regulation of light responses.","protein_coding","MORE AXILLARY BRANCHES 2 (MAX2)","MORE AXILLARY BRANCHES 2 (MAX2);PLEIOTROPIC PHOTOSIGNALING (PPS);ORESARA 9 (ORE9)"," ",{"$nulls":6}," "]
["AT5G15310","AT5G15310.1","Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 16 (MYB16)","MYB DOMAIN PROTEIN 16 (ATMYB16); (ATMIXTA);MYB DOMAIN PROTEIN 16 (MYB16)"," ",{"$nulls":6}," "]
["AT1G66230","AT1G66230.1","Encodes a putative transcription factor (MYB20).","protein_coding","MYB DOMAIN PROTEIN 20 (MYB20)","MYB DOMAIN PROTEIN 20 (AtMYB20);MYB DOMAIN PROTEIN 20 (MYB20)"," ",{"$nulls":6}," "]
["AT5G59780","AT5G59780.3","Encodes a putative transcription factor (MYB59).","protein_coding","MYB DOMAIN PROTEIN 59 (MYB59)"," (ATMYB59-3);MYB DOMAIN PROTEIN 59 (MYB59)"," ",{"$nulls":6}," "]
["AT5G13180","AT5G13180.1","Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.","protein_coding","NAC DOMAIN CONTAINING PROTEIN 83 (NAC083)","NAC DOMAIN CONTAINING PROTEIN 83 (ANAC083);NAC DOMAIN CONTAINING PROTEIN 83 (NAC083);VND-INTERACTING 2 (VNI2)"," ",{"$nulls":6}," "]
["AT4G29190","AT4G29190.1","Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger family protein (TAIR:AT2G19810.1); Has 726 Blast hits to 700 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 3; Plants - 406; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).","protein_coding","OXIDATION-RELATED ZINC FINGER 2 (OZF2)","OXIDATION-RELATED ZINC FINGER 2 (OZF2);ARABIDOPSIS THALIANA OXIDATION-RELATED ZINC FINGER 2 (ATOZF2);TANDEM ZINC FINGER 3 (TZF3); (ATTZF3); (ATC3H49)"," ",{"$nulls":6}," "]
["AT5G56550","AT5G56550.1","Encodes OXIDATIVE STRESS 3 (OXS3)&#65292; involved in tolerance to heavy metals and oxidative stress.","protein_coding","OXIDATIVE STRESS 3 (OXS3)","OXIDATIVE STRESS 3 (ATOXS3);OXIDATIVE STRESS 3 (OXS3)"," ",{"$nulls":6}," "]
["AT1G12710","AT1G12710.1","This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.","protein_coding","PHLOEM PROTEIN 2-A12 (PP2-A12)","PHLOEM PROTEIN 2-A12 (AtPP2-A12);PHLOEM PROTEIN 2-A12 (PP2-A12)"," ",{"$nulls":6}," "]
["AT2G42870","AT2G42870.1","Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein.  Closely related to PAR2 (At3g58850).  Up regulated after simulated shade perception.  Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response.  Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510).","protein_coding","PHY RAPIDLY REGULATED 1 (PAR1)","PHY RAPIDLY REGULATED 1 (PAR1);HELIX-LOOP-HELIX 1 (HLH1)"," ",{"$nulls":6}," "]
["AT1G14280","AT1G14280.1","Encodes phytochrome kinase substrate 2.  PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.","protein_coding","PHYTOCHROME KINASE SUBSTRATE 2 (PKS2)","PHYTOCHROME KINASE SUBSTRATE 2 (PKS2)"," ",{"$nulls":6}," "]
["AT5G04190","AT5G04190.1","Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.  It is phosphorylated in a phot1-dependent manner in vitro. Phosphorylation is transient and regulated by a type 2- protein phosphatase.","protein_coding","PHYTOCHROME KINASE SUBSTRATE 4 (PKS4)","PHYTOCHROME KINASE SUBSTRATE 4 (PKS4)"," ",{"$nulls":6}," "]
["AT2G27820","AT2G27820.1","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis.  Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","protein_coding","PREPHENATE DEHYDRATASE 1 (PD1)","AROGENATE DEHYDRATASE 3 (ADT3);PREPHENATE DEHYDRATASE 1 (PD1)"," ",{"$nulls":6}," "]
["AT5G24470","AT5G24470.1","Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.","protein_coding","PSEUDO-RESPONSE REGULATOR 5 (PRR5)","PSEUDO-RESPONSE REGULATOR 5 (PRR5);PSEUDO-RESPONSE REGULATOR 5 (APRR5)"," ",{"$nulls":6}," "]
["AT1G43160","AT1G43160.1","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","RELATED TO AP2 6 (RAP2.6)","RELATED TO AP2 6 (RAP2.6)"," ",{"$nulls":6}," "]
["AT3G57040","AT3G57040.1","response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2","protein_coding","RESPONSE REGULATOR 9 (ARR9)","RESPONSE REGULATOR 9 (ARR9);RESPONSE REGULATOR 4 (ATRR4)"," ",{"$nulls":6}," "]
["AT4G27410","AT4G27410.3","Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.","protein_coding","RESPONSIVE TO DESICCATION 26 (RD26)","RESPONSIVE TO DESICCATION 26 (RD26)"," ",{"$nulls":6}," "]
["AT3G25717","AT3G25717.1","ROTUNDIFOLIA like 16 (RTFL16); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: shoot development; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 17 (TAIR:AT1G13245.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","ROTUNDIFOLIA LIKE 16 (RTFL16)","ROTUNDIFOLIA LIKE 16 (RTFL16);DEVIL 6 (DVL6)"," ",{"$nulls":6}," "]
["AT1G13245","AT1G13245.1","ROTUNDIFOLIA like 17 (RTFL17); CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 15 (TAIR:AT1G68825.2); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","ROTUNDIFOLIA LIKE 17 (RTFL17)","DEVIL 4 (DVL4);ROTUNDIFOLIA LIKE 17 (RTFL17)"," ",{"$nulls":6}," "]
["AT2G39705","AT2G39705.1","ROTUNDIFOLIA like 8 (RTFL8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: shoot development; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 7 (TAIR:AT3G55515.1); Has 171 Blast hits to 171 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","ROTUNDIFOLIA LIKE 8 (RTFL8)","ROTUNDIFOLIA LIKE 8 (RTFL8);DEVIL 11 (DVL11)"," ",{"$nulls":6}," "]
["AT3G03820","AT3G03820.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT3G03840.1); Has 1097 Blast hits to 1091 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1096; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding","SMALL AUXIN UP RNA 29 (SAUR29)","SMALL AUXIN UP RNA 29 (SAUR29)"," ",{"$nulls":6}," "]
["AT1G80080","AT1G80080.1","Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.","protein_coding","TOO MANY MOUTHS (TMM)","RECEPTOR LIKE PROTEIN 17 (AtRLP17);TOO MANY MOUTHS (TMM)"," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
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{"sheet":"20","index":20,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT2G22880","AT2G22880.1","VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT4G37710.1); Has 33 Blast hits to 33 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT4G28460","AT4G28460.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G36780","AT2G36780.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","1.48e-08 ","14/89 (15.7%) ","422/30324 (1.4%) ","AT5G37490 AT5G05190 RRTF1 RING1 AT1G26420 AT1G07135 LOX3 AT3G46080 AT4G27280 AT1G64380 AT4G34150 AT1G74450 B120 TCH4"," "]
["AT3G23170","AT3G23170.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","2.43e-08 ","14/89 (15.7%) ","438/30324 (1.4%) ","AT5G37490 AT5G05190 RRTF1 RING1 AT1G26420 AT1G07135 LOX3 AT3G46080 AT4G27280 AT1G64380 AT4G34150 AT1G74450 B120 TCH4"," "]
["AT4G20000","AT4G20000.1","VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); Has 92 Blast hits to 92 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","7.34e-07 ","16/89 (18.0%) ","792/30324 (2.6%) ","AT5G37490 AT5G05190 RRTF1 RING1 AT1G26420 AT1G07135 LOX3 AT3G46080 AT4G01700 AT4G27280 AT1G64380 AT4G34150 AT1G74450 B120 TCH4 AT2G17660"," "]
["AT1G77640","AT1G77640.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding",null,null," ","GO:0006952 defense response ","P ","1.17e-06 ","22/89 (24.7%) ","1667/30324 (5.5%) ","AT5G39580 AT5G44910 AT5G37490 AT3G44630 AT5G05190 AT5G18360 AT3G48640 CPK29 RRTF1 BAP2 RING1 AT1G26420 LHT7 LOX3 AT4G01700 GRX480 MPK11 AT1G10340 AT4G34150 SDR3 AT1G57630 B120"," "]
["AT5G39580","AT5G39580.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 3879 Blast hits to 3855 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 13; Plants - 3857; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","2.85e-05 ","31/89 (34.8%) ","3789/30324 (12.5%) ","AT5G37490 AT5G05190 AT3G48640 AT1G77640 CYP82C4 RRTF1 AT5G65600 RING1 AT1G26420 AT2G31945 AT1G07135 LHT7 GSTU11 LOX3 AT3G46080 AT4G01700 AT4G27280 GRX480 AT1G64380 MPK11 AT1G10340 AT4G34150 WAKL4 AT1G74450 MC8 AT1G30700 AT1G57630 ATPMEPCRB B120 TCH4 AT2G17660"," "]
["AT3G44630","AT3G44630.3","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41236 Blast hits to 23630 proteins in 841 species: Archae - 26; Bacteria - 2523; Metazoa - 3794; Fungi - 289; Plants - 32905; Viruses - 4; Other Eukaryotes - 1695 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","4.49e-05 ","26/89 (29.2%) ","2805/30324 (9.3%) ","AT5G37490 AT5G05190 AT3G48640 AT1G77640 RRTF1 AT5G65600 RING1 AT1G26420 AT2G31945 AT1G07135 LHT7 GSTU11 LOX3 AT3G46080 AT4G27280 GRX480 AT1G64380 MPK11 AT1G10340 AT4G34150 AT1G74450 AT1G30700 AT1G57630 ATPMEPCRB B120 TCH4"," "]
["AT2G27080","AT2G27080.1","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G21130.1); Has 1062 Blast hits to 1061 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1062; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","6.39e-05 ","24/89 (27.0%) ","2459/30324 (8.1%) ","AT5G37490 AT5G05190 AT3G48640 AT1G77640 RRTF1 RING1 AT1G26420 AT1G07135 GSTU11 LOX3 AT3G46080 AT4G01700 AT4G27280 GRX480 AT1G64380 MPK11 AT4G34150 AT1G74450 MC8 AT1G57630 ATPMEPCRB B120 TCH4 AT2G17660"," "]
["AT1G59865","AT1G59865.1","unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","2.44e-04 ","20/89 (22.5%) ","1879/30324 (6.2%) ","AT5G37490 AT5G05190 AT1G77640 RRTF1 AT5G65600 RING1 AT1G26420 AT1G07135 LOX3 AT3G46080 AT4G27280 GRX480 AT1G64380 MPK11 AT4G34150 AT1G74450 AT1G57630 ATPMEPCRB B120 TCH4"," "]
["AT1G53060","AT1G53060.1","Legume lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Lectin (InterPro:IPR016363); BEST Arabidopsis thaliana protein match is: Legume lectin family protein (TAIR:AT1G53080.1); Has 1853 Blast hits to 1833 proteins in 123 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 1819; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009611 response to wounding ","P ","4.43e-04 ","9/89 (10.1%) ","340/30324 (1.1%) ","AT1G07135 LOX3 AT4G27280 GRX480 MPK11 AT4G34150 AT1G74450 B120 TCH4"," "]
["AT2G36690","AT2G36690.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","6.03e-04 ","40/89 (44.9%) ","6619/30324 (21.8%) ","AT5G39580 AT5G44910 AT2G22880 AT5G37490 AT3G44630 AT5G05190 AT5G18360 AT3G48640 CPK29 AT1G77640 CYP82C4 RRTF1 BAP2 AT5G65600 RING1 AT1G26420 AT2G31945 AT1G07135 LHT7 GSTU11 RLP2 LOX3 AT3G46080 AT4G01700 AT4G27280 GRX480 AT1G64380 MPK11 AT1G10340 AT4G34150 WAKL4 SDR3 AT1G74450 MC8 AT1G30700 AT1G57630 ATPMEPCRB B120 TCH4 AT2G17660"," "]
["AT2G17660","AT2G17660.1","RPM1-interacting protein 4 (RIN4) family protein; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT4G35655.1); Has 277 Blast hits to 276 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 275; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009612 response to mechanical stimulus ","P ","7.86e-04 ","5/89 (5.6%) ","64/30324 (0.2%) ","AT1G07135 AT4G27280 AT4G34150 AT1G74450 TCH4"," "]
["AT2G35710","AT2G35710.1","Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043450 alkene biosynthetic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT3G48640","AT3G48640.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1900673 olefin metabolic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT1G05670","AT1G05670.1","Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink).","protein_coding",null,null," ","GO:1900674 olefin biosynthetic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT1G30700","AT1G30700.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species: Archae - 47; Bacteria - 2248; Metazoa - 0; Fungi - 1602; Plants - 666; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043449 cellular alkene metabolic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT2G36440","AT2G36440.1","unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009693 ethylene biosynthetic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT1G43000","AT1G43000.1","PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G21000.1); Has 398 Blast hits to 398 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009692 ethylene metabolic process ","P ","9.15e-04 ","6/89 (6.7%) ","120/30324 (0.4%) ","AT5G37490 RRTF1 BAP2 AT2G31945 LOX3 GRX480"," "]
["AT3G18560","AT3G18560.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","1.11e-03 ","14/89 (15.7%) ","1032/30324 (3.4%) ","AT5G37490 AT5G05190 AT3G48640 CPK29 RRTF1 BAP2 RING1 AT1G26420 GRX480 MPK11 AT1G10340 AT4G34150 AT1G57630 B120"," "]
["AT1G26400","AT1G26400.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26420.1); Has 4296 Blast hits to 4165 proteins in 631 species: Archae - 49; Bacteria - 1840; Metazoa - 8; Fungi - 1622; Plants - 655; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","1.36e-03 ","29/89 (32.6%) ","4028/30324 (13.3%) ","AT5G39580 AT5G44910 AT5G37490 AT3G44630 AT5G05190 AT5G18360 AT3G48640 CPK29 RRTF1 BAP2 RING1 AT1G26420 AT1G07135 LHT7 GSTU11 LOX3 AT4G01700 AT4G27280 GRX480 MPK11 AT1G10340 AT4G34150 SDR3 AT1G74450 MC8 AT1G57630 ATPMEPCRB B120 TCH4"," "]
["AT1G67880","AT1G67880.1","beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006865 amino acid transport ","P ","7.98e-03 ","7/89 (7.9%) ","264/30324 (0.9%) ","AT5G39580 LHT7 AT4G01700 AT1G64380 AT1G30700 AT1G57630 ATPMEPCRB"," "]
["AT4G34150","AT4G34150.1","Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G39320","AT4G39320.1","microtubule-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT1G06137","AT1G06137.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT3G46080","AT3G46080.1","C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G46090.1); Has 1162 Blast hits to 1123 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 356; Fungi - 0; Plants - 800; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G37490","AT5G37490.1","ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 1 (TAIR:AT1G66160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0030246 carbohydrate binding ","F ","9.93e-03 ","5/89 (5.6%) ","107/30324 (0.4%) ","AT1G53060 PP2-B14 PP2-B13 B120 AT1G53080"," "]
["AT5G05190","AT5G05190.1","Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G56410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G47540","AT3G47540.2","Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT1G33760","AT1G33760.1","encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G51920","AT1G51920.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G26420","AT1G26420.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26380.1); Has 4265 Blast hits to 4053 proteins in 603 species: Archae - 34; Bacteria - 1861; Metazoa - 0; Fungi - 1585; Plants - 662; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G28703","AT4G28703.1","RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G04300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G12880","AT5G12880.1","proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G16640","AT1G16640.1","AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G06220.1); Has 242 Blast hits to 231 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 242; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G01700","AT4G01700.1","Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT1G02360.1); Has 2167 Blast hits to 2158 proteins in 471 species: Archae - 0; Bacteria - 548; Metazoa - 37; Fungi - 6; Plants - 1456; Viruses - 21; Other Eukaryotes - 99 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G34380","AT4G34380.1","Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G18950.1); Has 30752 Blast hits to 16743 proteins in 595 species: Archae - 24; Bacteria - 4552; Metazoa - 10989; Fungi - 7521; Plants - 3775; Viruses - 0; Other Eukaryotes - 3891 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G37820","AT2G37820.1","Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37800.1); Has 2103 Blast hits to 832 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 14; Plants - 1982; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G53080","AT1G53080.1","Legume lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Lectin (InterPro:IPR016363); BEST Arabidopsis thaliana protein match is: Legume lectin family protein (TAIR:AT3G16530.1); Has 2015 Blast hits to 1995 proteins in 120 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 1993; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G24310","AT4G24310.1","Protein of unknown function (DUF679); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF679) (TAIR:AT3G02430.1); Has 267 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G44910","AT5G44910.1","Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45000.1); Has 1558 Blast hits to 1491 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G31945","AT2G31945.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G38310","AT5G38310.1","unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G74450","AT1G74450.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G18740.1); Has 215 Blast hits to 212 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G27280","AT4G27280.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G79245","AT1G79245.1","pseudogene of unknown protein","pseudogene",null,null," ",{"$nulls":6}," "]
["AT5G32179","AT5G32179.1","transposable element gene; gypsy-like retrotransposon family (Athila), has a 2.8e-301 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT5G65600","AT5G65600.1","Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G10530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G06960","AT2G06960.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G36690.1); Has 3743 Blast hits to 3727 proteins in 437 species: Archae - 0; Bacteria - 62; Metazoa - 3; Fungi - 20; Plants - 3620; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G64380","AT1G64380.1","encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G10340","AT1G10340.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G24600.4); Has 23228 Blast hits to 12811 proteins in 577 species: Archae - 31; Bacteria - 1612; Metazoa - 12827; Fungi - 1604; Plants - 2793; Viruses - 138; Other Eukaryotes - 4223 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G19710","AT2G19710.1","Regulator of Vps4 activity in the MVB pathway protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G29440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G27654","AT4G27654.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G18360","AT5G18360.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G17970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G08870","AT3G08870.1","Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 126249 Blast hits to 124574 proteins in 5056 species: Archae - 117; Bacteria - 14623; Metazoa - 46287; Fungi - 11015; Plants - 35222; Viruses - 451; Other Eukaryotes - 18534 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G63860","AT1G63860.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63870.1); Has 21728 Blast hits to 14713 proteins in 764 species: Archae - 21; Bacteria - 1218; Metazoa - 3321; Fungi - 679; Plants - 12992; Viruses - 308; Other Eukaryotes - 3189 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G03460","AT4G03460.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03500.1); Has 31827 Blast hits to 15474 proteins in 712 species: Archae - 44; Bacteria - 2495; Metazoa - 17236; Fungi - 2457; Plants - 2857; Viruses - 141; Other Eukaryotes - 6597 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G57630","AT1G57630.1","Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44670.2); Has 1555 Blast hits to 1476 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1555; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G07135","AT1G07135.1","glycine-rich protein; Has 22251 Blast hits to 8348 proteins in 789 species: Archae - 21; Bacteria - 7328; Metazoa - 6126; Fungi - 1280; Plants - 3980; Viruses - 524; Other Eukaryotes - 2992 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G18540","AT4G18540.1","unknown protein; Has 209 Blast hits to 205 proteins in 54 species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G02330","AT4G02330.1","Encodes a pectin methylesterase that is sensitive to chilling stress and brassinosteroid regulation.","protein_coding"," (ATPMEPCRB)"," (ATPMEPCRB); (AtPME41);PECTIN METHYLESTERASE 41 (PME41)"," ",{"$nulls":6}," "]
["AT4G21390","AT4G21390.1","B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink).","protein_coding"," (B120)"," (B120)"," ",{"$nulls":6}," "]
["AT1G28480","AT1G28480.1","Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state.  GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription.  GRX480 transcription is SA-inducible and requires NPR1.  Maybe involved in SA/JA cross-talk.","protein_coding"," (GRX480)"," (roxy19); (GRX480)"," ",{"$nulls":6}," "]
["AT5G10380","AT5G10380.1","Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators.","protein_coding"," (RING1)"," (ATRING1); (RING1)"," ",{"$nulls":6}," "]
["AT4G31950","AT4G31950.1","member of CYP82C","protein_coding","CYTOCHROME P450, FAMILY 82, SUBFAMILY C, POLYPEPTIDE 3 (CYP82C3)","CYTOCHROME P450, FAMILY 82, SUBFAMILY C, POLYPEPTIDE 3 (CYP82C3)"," ",{"$nulls":6}," "]
["AT4G31940","AT4G31940.1","The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.","protein_coding","CYTOCHROME P450, FAMILY 82, SUBFAMILY C, POLYPEPTIDE 4 (CYP82C4)","CYTOCHROME P450, FAMILY 82, SUBFAMILY C, POLYPEPTIDE 4 (CYP82C4)"," ",{"$nulls":6}," "]
["AT2G45760","AT2G45760.1","encodes a protein that is similar to BONZAI1-binding protein BAP1.","protein_coding","BON ASSOCIATION PROTEIN 2 (BAP2)","BON ASSOCIATION PROTEIN 1-LIKE (BAL);BON ASSOCIATION PROTEIN 2 (BAP2)"," ",{"$nulls":6}," "]
["AT1G76040","AT1G76040.2","member of Calcium Dependent Protein Kinase","protein_coding","CALCIUM-DEPENDENT PROTEIN KINASE 29 (CPK29)","CALCIUM-DEPENDENT PROTEIN KINASE 29 (CPK29)"," ",{"$nulls":6}," "]
["AT3G21520","AT3G21520.1","Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.","protein_coding","DUF679 DOMAIN MEMBRANE PROTEIN 1 (DMP1)","ARABIDOPSIS THALIANA DUF679 DOMAIN MEMBRANE PROTEIN 1 (AtDMP1);DUF679 DOMAIN MEMBRANE PROTEIN 1 (DMP1)"," ",{"$nulls":6}," "]
["AT1G69930","AT1G69930.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 11 (GSTU11)","GLUTATHIONE S-TRANSFERASE TAU 11 (GSTU11);GLUTATHIONE S-TRANSFERASE TAU 11 (ATGSTU11)"," ",{"$nulls":6}," "]
["AT1G69920","AT1G69920.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 12 (GSTU12)","GLUTATHIONE S-TRANSFERASE TAU 12 (GSTU12);ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12 (ATGSTU12)"," ",{"$nulls":6}," "]
["AT3G23630","AT3G23630.1","Encodes an isopentenyl transferase involved in cytokinin biosynthesis.","protein_coding","ISOPENTENYLTRANSFERASE 7 (IPT7)","ISOPENTENYLTRANSFERASE 7 (IPT7);ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 7 (ATIPT7)"," ",{"$nulls":6}," "]
["AT1G17420","AT1G17420.1","LOX3 encode  a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).","protein_coding","LIPOXYGENASE 3 (LOX3)","LIPOXYGENASE 3 (LOX3);ARABIDOPSIS THALIANA LIPOXYGENASE 3 (ATLOX3)"," ",{"$nulls":6}," "]
["AT4G35180","AT4G35180.1","LYS/HIS transporter 7 (LHT7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G47670.1); Has 1572 Blast hits to 1571 proteins in 189 species: Archae - 0; Bacteria - 36; Metazoa - 144; Fungi - 199; Plants - 1047; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).","protein_coding","LYS/HIS TRANSPORTER 7 (LHT7)","LYS/HIS TRANSPORTER 7 (LHT7)"," ",{"$nulls":6}," "]
["AT1G01560","AT1G01560.2","member of MAP Kinase","protein_coding","MAP KINASE 11 (MPK11)","MAP KINASE 11 (MPK11);MAP KINASE 11 (ATMPK11)"," ",{"$nulls":6}," "]
["AT1G70170","AT1G70170.1","mutant has Late flowering; Early senescence; Matrix Metalloproteinase","protein_coding","MATRIX METALLOPROTEINASE (MMP)","MATRIX METALLOPROTEINASE (MMP)"," ",{"$nulls":6}," "]
["AT1G16420","AT1G16420.1","Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0.","protein_coding","METACASPASE 8 (MC8)","ARABIDOPSIS THALIANA METACASPASE 8 (ATMC8);METACASPASE 2E (AtMCP2e);METACASPASE 2E (MCP2e);METACASPASE 8 (MC8)"," ",{"$nulls":6}," "]
["AT4G21850","AT4G21850.1","methionine sulfoxide reductase B9 (MSRB9); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B7 (TAIR:AT4G21830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","METHIONINE SULFOXIDE REDUCTASE B9 (MSRB9)","METHIONINE SULFOXIDE REDUCTASE B9 (ATMSRB9);METHIONINE SULFOXIDE REDUCTASE B9 (MSRB9)"," ",{"$nulls":6}," "]
["AT4G37780","AT4G37780.1","encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 87 (MYB87)"," (ATMYB87);MYB DOMAIN PROTEIN 87 (MYB87)"," ",{"$nulls":6}," "]
["AT5G22380","AT5G22380.1","NAC domain containing protein 90 (NAC090); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 61 (TAIR:AT3G44350.2); Has 2731 Blast hits to 2726 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2731; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","NAC DOMAIN CONTAINING PROTEIN 90 (NAC090)","NAC DOMAIN CONTAINING PROTEIN 90 (NAC090);NAC DOMAIN CONTAINING PROTEIN 90 (anac090)"," ",{"$nulls":6}," "]
["AT1G56240","AT1G56240.1","phloem protein 2-B13 (PP2-B13); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B14 (TAIR:AT1G56250.1); Has 533 Blast hits to 519 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 533; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","PHLOEM PROTEIN 2-B13 (PP2-B13)","PHLOEM PROTEIN 2-B13 (PP2-B13);PHLOEM PROTEIN 2-B13 (AtPP2-B13)"," ",{"$nulls":6}," "]
["AT1G56250","AT1G56250.1","Encodes an F-box protein that can functionally replace VirF, regulating levels of the VirE2 and VIP1 proteins via a VBF-containing SCF complex.  It is thought to be involved in DNA integration and T-DNA degradation.","protein_coding","PHLOEM PROTEIN 2-B14 (PP2-B14)","PHLOEM PROTEIN 2-B14 (AtPP2-B14);VIP1-BINDING F-BOX PROTEIN (VBF);PHLOEM PROTEIN 2-B14 (PP2-B14)"," ",{"$nulls":6}," "]
["AT1G17240","AT1G17240.1","Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.","protein_coding","RECEPTOR LIKE PROTEIN 2 (RLP2)","RECEPTOR LIKE PROTEIN 2 (RLP2);RECEPTOR LIKE PROTEIN 2 (AtRLP2)"," ",{"$nulls":6}," "]
["AT4G34410","AT4G34410.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","protein_coding","REDOX RESPONSIVE TRANSCRIPTION FACTOR 1 (RRTF1)","REDOX RESPONSIVE TRANSCRIPTION FACTOR 1 (RRTF1)"," ",{"$nulls":6}," "]
["AT4G15417","AT4G15417.1","RNAse II-like 1 (RTL1); FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6428 Blast hits to 6386 proteins in 2315 species: Archae - 23; Bacteria - 4325; Metazoa - 271; Fungi - 247; Plants - 236; Viruses - 14; Other Eukaryotes - 1312 (source: NCBI BLink).","protein_coding","RNASE II-LIKE 1 (RTL1)","RNASE II-LIKE 1 (RTL1);RNASE II-LIKE 1 (ATRTL1)"," ",{"$nulls":6}," "]
["AT2G47130","AT2G47130.1","Encodes a short-chain dehydrogenase/reductase that is not involved in ABA biosynthesis but plays an important role in plant defense response to bacteria.","protein_coding","SHORT-CHAIN DEHYDROGENASE/REDUCTASE 2 (SDR3)"," (ATSDR3);SHORT-CHAIN DEHYDROGENASE/REDUCTASE 2 (SDR3)"," ",{"$nulls":6}," "]
["AT1G67810","AT1G67810.1","Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.","protein_coding","SULFUR E2 (SUFE2)","SULFUR E2 (SUFE2)"," ",{"$nulls":6}," "]
["AT5G57560","AT5G57560.1","Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli","protein_coding","TOUCH 4 (TCH4)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 22 (XTH22);TOUCH 4 (TCH4)"," ",{"$nulls":6}," "]
["AT1G16150","AT1G16150.1","Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily.  Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+.","protein_coding","WALL ASSOCIATED KINASE-LIKE 4 (WAKL4)","WALL ASSOCIATED KINASE-LIKE 4 (WAKL4)"," ",{"$nulls":6}," "]
["AT1G65310","AT1G65310.1","Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC   2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17 (XTH17)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17 (XTH17);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17 (ATXTH17)"," ",{"$nulls":6}," "]
["AT4G30280","AT4G30280.1","Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC   2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18 (XTH18)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18 (ATXTH18);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18 (XTH18)"," ",{"$nulls":6}," "]
["AT4G25810","AT4G25810.1","xyloglucan endotransglycosylase-related protein (XTR6)","protein_coding","XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6 (XTR6)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 23 (XTH23);XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6 (XTR6)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT4G30690","AT4G30690.1","Translation initiation factor 3 protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, N-terminal (InterPro:IPR019814), Translation initiation factor 3, conserved site (InterPro:IPR019813), Translation initiation factor 3, C-terminal (InterPro:IPR019815), Translation initiation factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana protein match is: Translation initiation factor 3 protein (TAIR:AT2G24060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT1G79510","AT1G79510.1","Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G16320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G42090","AT5G42090.1","Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009536 plastid ","C ","1.15e-03 ","23/61 (37.7%) ","4032/30324 (13.3%) ","AT5G51010 AT3G52230 AT1G79510 ROC3 CYP707A2 emb1138 cpHsc70-2 AT5G42090 AT1G19740 AT4G30690 PGLCT SKIP6 AT5G09820 AT3G04760 TLP2 AT5G46560 PFK4 DFL1 G6PD1 FADA UGT73C1 ARASP AT5G19590"," "]
["AT5G01210","AT5G01210.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009507 chloroplast ","C ","3.30e-03 ","22/61 (36.1%) ","3956/30324 (13.0%) ","AT5G51010 AT3G52230 AT1G79510 ROC3 CYP707A2 emb1138 cpHsc70-2 AT5G42090 AT1G19740 AT4G30690 PGLCT SKIP6 AT5G09820 AT3G04760 AT5G46560 PFK4 DFL1 G6PD1 FADA UGT73C1 ARASP AT5G19590"," "]
["AT1G21830","AT1G21830.1","unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G46560","AT5G46560.1","CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT2G14220","AT2G14220.1","transposable element gene; copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT2G23940","AT2G23940.1","Protein of unknown function (DUF788); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF788 (InterPro:IPR008506); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF788) (TAIR:AT4G30500.1); Has 311 Blast hits to 311 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 102; Plants - 52; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G21352","AT3G21352.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21351.1); Has 26 Blast hits to 26 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G05250","AT2G05250.1","DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G02620","AT1G02620.1","Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, intracellular; CONTAINS InterPro DOMAIN/s: Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: secretion-associated RAS super family 2 (TAIR:AT4G02080.1); Has 4733 Blast hits to 4733 proteins in 333 species: Archae - 0; Bacteria - 0; Metazoa - 2238; Fungi - 747; Plants - 975; Viruses - 0; Other Eukaryotes - 773 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G30200","AT1G30200.2","F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G46170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G47610","AT5G47610.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17245.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G59080","AT5G59080.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G09820","AT5G09820.2","Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G24530","AT1G24530.1","Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 47444 Blast hits to 22226 proteins in 799 species: Archae - 42; Bacteria - 6792; Metazoa - 17370; Fungi - 11016; Plants - 5872; Viruses - 0; Other Eukaryotes - 6352 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G51010","AT5G51010.1","Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G22930","AT1G22930.1","T-complex protein 11; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.1); Has 9929 Blast hits to 7090 proteins in 817 species: Archae - 19; Bacteria - 1454; Metazoa - 4175; Fungi - 699; Plants - 382; Viruses - 14; Other Eukaryotes - 3186 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G38280","AT4G38280.1","BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G52480","AT3G52480.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G08110","AT4G08110.1","transposable element gene; CACTA-like transposase family (Ptta/En/Spm), has a 4.2e-66 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT5G18850","AT5G18850.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G15690","AT4G15690.1","Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15700.1); Has 1698 Blast hits to 1693 proteins in 230 species: Archae - 0; Bacteria - 23; Metazoa - 485; Fungi - 319; Plants - 757; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G19740","AT1G19740.1","ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G75460.1); Has 3644 Blast hits to 3644 proteins in 880 species: Archae - 0; Bacteria - 1707; Metazoa - 175; Fungi - 37; Plants - 117; Viruses - 0; Other Eukaryotes - 1608 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G04760","AT3G04760.1","Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 62164 Blast hits to 15231 proteins in 315 species: Archae - 6; Bacteria - 70; Metazoa - 1026; Fungi - 1135; Plants - 57538; Viruses - 0; Other Eukaryotes - 2389 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G15545","AT4G15545.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G54870","AT5G54870.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G19590","AT5G19590.1","Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G33102","AT1G33102.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G52230","AT3G52230.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G16320","AT1G16320.1","Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G66440","AT5G66440.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G19700","AT4G19700.1","Encodes BOI (Botrytis Susceptible 1 Interactor).  Has E3 ubiquitin ligase activity. Interacts with and ubiquitinates BOS1 (Botrytis Susceptible 1).  It prevents caspase activation and attenuates cell death.","protein_coding"," (RING)"," (RING); (ATILP);IAP-LIKE PROTEIN (ILP);BOTRYTIS SUSCEPTIBLE1 INTERACTOR (BOI)"," ",{"$nulls":6}," "]
["AT2G29090","AT2G29090.1","Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.","protein_coding","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 2 (CYP707A2)","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 2 (CYP707A2)"," ",{"$nulls":6}," "]
["AT1G58360","AT1G58360.1","Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds.  Functions in amino acid uptake into embryos.","protein_coding","AMINO ACID PERMEASE 1 (AAP1)","NEUTRAL AMINO ACID TRANSPORTER 2 (NAT2);AMINO ACID PERMEASE 1 (AAP1)"," ",{"$nulls":6}," "]
["AT2G32480","AT2G32480.1","Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.","protein_coding","ARABIDOPSIS SERIN PROTEASE (ARASP)","ARABIDOPSIS SERIN PROTEASE (ARASP)"," ",{"$nulls":6}," "]
["AT5G67380","AT5G67380.1","Casein kinase II (CK2) catalytic subunit (alpha 1). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis.","protein_coding","CASEIN KINASE ALPHA 1 (CKA1)"," (ATCKA1);CASEIN KINASE ALPHA 1 (CKA1)"," ",{"$nulls":6}," "]
["AT5G49910","AT5G49910.1","Stromal heat shock protein involved in protein import into chloroplast.","protein_coding","CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (cpHsc70-2)","CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (CPHSC70-2EAT SHOCK PROTEIN 70-2);CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (cpHsc70-2);HEAT SHOCK PROTEIN 70-7 (HSC70-7)"," ",{"$nulls":6}," "]
["AT1G62810","AT1G62810.1","Encodes COPPER AMINE OXIDASE1 (CuAO1). Contributes to abscisic acid- and polyamine-induced nitric oxide biosynthesis and abscisic acid signal transduction.","protein_coding","COPPER AMINE OXIDASE1 (CUAO1)","COPPER AMINE OXIDASE1 (CUAO1)"," ",{"$nulls":6}," "]
["AT3G28740","AT3G28740.1","Encodes a member of the cytochrome p450 family. Expression is upregulated in response to cis-jasmonate treatment. Overexpression induces synthesis of volatile compounds that affect chemical ecology and insect interactions.","protein_coding","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 11 (CYP81D11)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 11 (CYP81D11)"," ",{"$nulls":6}," "]
["AT5G54510","AT5G54510.1","Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins.  Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).","protein_coding","DWARF IN LIGHT 1 (DFL1)","DWARF IN LIGHT 1 (DFL1);GRETCHEN HAGEN3.6 (GH3.6)"," ",{"$nulls":6}," "]
["AT5G26742","AT5G26742.2","embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1); Has 62370 Blast hits to 60300 proteins in 3359 species: Archae - 1368; Bacteria - 33087; Metazoa - 7991; Fungi - 5480; Plants - 3250; Viruses - 141; Other Eukaryotes - 11053 (source: NCBI BLink).","protein_coding","EMBRYO DEFECTIVE 1138 (emb1138)","EMBRYO DEFECTIVE 1138 (emb1138); (RH3); (ATRH3)"," ",{"$nulls":6}," "]
["AT4G27030","AT4G27030.1","Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol.","protein_coding","FATTY ACID DESATURASE A (FADA)","FATTY ACID DESATURASE 4 (FAD4); (FAD4);FATTY ACID DESATURASE A (FADA)"," ",{"$nulls":6}," "]
["AT5G35790","AT5G35790.1","Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","protein_coding","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1 (G6PD1)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1 (G6PD1)"," ",{"$nulls":6}," "]
["AT2G18050","AT2G18050.1","encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.","protein_coding","HISTONE H1-3 (HIS1-3)","HISTONE H1-3 (HIS1-3)"," ",{"$nulls":6}," "]
["AT3G21760","AT3G21760.1","Encodes HYR1, a UDP glycosyltransferase (UGT).  HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.","protein_coding","HYPOSTATIN RESISTANCE 1 (HYR1)","HYPOSTATIN RESISTANCE 1 (HYR1)"," ",{"$nulls":6}," "]
["AT4G16690","AT4G16690.1","Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","protein_coding","METHYL ESTERASE 16 (MES16)","ARABIDOPSIS THALIANA METHYL ESTERASE 16 (ATMES16);METHYL ESTERASE 16 (MES16)"," ",{"$nulls":6}," "]
["AT5G55930","AT5G55930.1","oligopeptide transporter","protein_coding","OLIGOPEPTIDE TRANSPORTER 1 (OPT1)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 1 (ATOPT1);OLIGOPEPTIDE TRANSPORTER 1 (OPT1)"," ",{"$nulls":6}," "]
["AT3G29370","AT3G29370.1","Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors.","protein_coding","P1R3 (P1R3)","P1R3 (P1R3)"," ",{"$nulls":6}," "]
["AT5G61580","AT5G61580.1","phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","PHOSPHOFRUCTOKINASE 4 (PFK4)","PHOSPHOFRUCTOKINASE 4 (PFK4)"," ",{"$nulls":6}," "]
["AT4G35470","AT4G35470.1","Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.","protein_coding","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 4 (PIRL4)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 4 (PIRL4)"," ",{"$nulls":6}," "]
["AT5G16150","AT5G16150.1","Encodes a putative plastidic glucose transporter.","protein_coding","PLASTIDIC GLC TRANSLOCATOR (PGLCT)","PLASTIDIC GLC TRANSLOCATOR (PGLCT);GLUCOSE TRANSPORTER 1 (GLT1)"," ",{"$nulls":6}," "]
["AT3G22200","AT3G22200.2","Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.","protein_coding","POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)","POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)"," ",{"$nulls":6}," "]
["AT2G30520","AT2G30520.1","light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis","protein_coding","ROOT PHOTOTROPISM 2 (RPT2)","ROOT PHOTOTROPISM 2 (RPT2)"," ",{"$nulls":6}," "]
["AT2G16600","AT2G16600.1","Encodes cytosolic cyclophilin ROC3.","protein_coding","ROTAMASE CYP 3 (ROC3)","ROTAMASE CYP 3 (ROC3)"," ",{"$nulls":6}," "]
["AT2G31380","AT2G31380.1","a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction.","protein_coding","SALT TOLERANCE HOMOLOGUE (STH)","SALT TOLERANCE HOMOLOGUE (STH)"," ",{"$nulls":6}," "]
["AT2G21950","AT2G21950.1","Encodes an SKP1 interacting partner (SKIP6).","protein_coding","SKP1 INTERACTING PARTNER 6 (SKIP6)","SKP1 INTERACTING PARTNER 6 (SKIP6)"," ",{"$nulls":6}," "]
["AT4G37760","AT4G37760.1","squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","SQUALENE EPOXIDASE 3 (SQE3)","SQUALENE EPOXIDASE 3 (SQE3)"," ",{"$nulls":6}," "]
["AT5G18680","AT5G18680.1","Member of TLP family","protein_coding","TUBBY LIKE PROTEIN 11 (TLP11)","TUBBY LIKE PROTEIN 11 (TLP11);TUBBY LIKE PROTEIN 11 (AtTLP11)"," ",{"$nulls":6}," "]
["AT2G18280","AT2G18280.1","Member of TLP family","protein_coding","TUBBY LIKE PROTEIN 2 (TLP2)","TUBBY LIKE PROTEIN 2 (TLP2);TUBBY LIKE PROTEIN 2 (AtTLP2)"," ",{"$nulls":6}," "]
["AT1G75440","AT1G75440.1","ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink).","protein_coding","UBIQUITIN-CONJUGATING ENZYME 16 (UBC16)","UBIQUITIN-CONJUGATING ENZYME 16 (UBC16)"," ",{"$nulls":6}," "]
["AT2G36750","AT2G36750.1","UDP-glucosyl transferase 73C1 (UGT73C1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7705 Blast hits to 7611 proteins in 415 species: Archae - 0; Bacteria - 205; Metazoa - 2197; Fungi - 31; Plants - 5129; Viruses - 79; Other Eukaryotes - 64 (source: NCBI BLink).","protein_coding","UDP-GLUCOSYL TRANSFERASE 73C1 (UGT73C1)","UDP-GLUCOSYL TRANSFERASE 73C1 (UGT73C1)"," ",{"$nulls":6}," "]
["AT3G23730","AT3G23730.1","xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 16 (XTH16)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 16 (XTH16)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT5G03380","AT5G03380.1","Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT2G36950.1); Has 4632 Blast hits to 3385 proteins in 434 species: Archae - 9; Bacteria - 451; Metazoa - 988; Fungi - 256; Plants - 2406; Viruses - 0; Other Eukaryotes - 522 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT5G62570","AT5G62570.2","Calmodulin binding protein-like; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G65920","AT5G65920.1","ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G49810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","2.42e-19 ","31/65 (47.7%) ","1667/30324 (5.5%) ","VICTR AT3G19970 AT1G63750 AT2G40270 AT3G46600 SERK4 SYP121 AT1G31540 CPK4 AT5G42050 AT1G33600 SEC1B MLO2 AT4G28400 AT1G16670 AT3G57700 TIR AT1G56520 BIK1 AT5G62570 PUB12 NPR3 AT1G76600 CRK20 MUR4 NSL1 AT3G52800 PEPR1 TIP AT5G47070 ACA2"," "]
["AT5G42050","AT5G42050.1","DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","4.80e-16 ","18/65 (27.7%) ","422/30324 (1.4%) ","AT1G68340 AT3G19970 AT3G46600 SERK4 SYP121 MLO2 SUT2 AT5G03380 AT3G57450 BIK1 PUB12 NPR3 AT1G76600 AT3G62260 NSL1 AT3G52800 AT4G38940 ACA2"," "]
["AT3G57450","AT3G57450.1","unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","9.27e-16 ","18/65 (27.7%) ","438/30324 (1.4%) ","AT1G68340 AT3G19970 AT3G46600 SERK4 SYP121 MLO2 SUT2 AT5G03380 AT3G57450 BIK1 PUB12 NPR3 AT1G76600 AT3G62260 NSL1 AT3G52800 AT4G38940 ACA2"," "]
["AT1G33600","AT1G33600.1","Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33590.1); Has 71591 Blast hits to 27926 proteins in 991 species: Archae - 22; Bacteria - 6296; Metazoa - 16731; Fungi - 641; Plants - 43101; Viruses - 4; Other Eukaryotes - 4796 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","7.41e-13 ","36/65 (55.4%) ","4028/30324 (13.3%) ","VICTR AT1G55450 AT3G19970 AT1G63750 AT2G40270 AT3G46600 SERK4 SYP121 AT1G31540 CPK4 AT5G42050 AT1G33600 SEC1B MLO2 SUT2 AT4G28400 AT1G16670 AT3G57700 MYB96 TIR AT1G56520 AT3G57450 BIK1 AT5G62570 PUB12 NPR3 PTI1-4 AT1G76600 CRK20 MUR4 NSL1 AT3G52800 PEPR1 TIP AT5G47070 ACA2"," "]
["AT3G57700","AT3G57700.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57770.1); Has 67512 Blast hits to 66820 proteins in 2383 species: Archae - 56; Bacteria - 6522; Metazoa - 21491; Fungi - 4320; Plants - 26508; Viruses - 167; Other Eukaryotes - 8448 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","1.16e-12 ","21/65 (32.3%) ","1032/30324 (3.4%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 AT1G76600 NSL1 AT3G52800 PEPR1 TIP AT5G47070 ACA2"," "]
["AT1G69840","AT1G69840.1","SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5669 Blast hits to 5668 proteins in 1821 species: Archae - 158; Bacteria - 3805; Metazoa - 307; Fungi - 277; Plants - 271; Viruses - 5; Other Eukaryotes - 846 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","1.78e-12 ","29/65 (44.6%) ","2459/30324 (8.1%) ","AT1G68340 AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT1G16670 AT5G03380 AT3G57700 MYB96 AT3G57450 BIK1 PUB12 NPR3 AT1G76600 AT3G62260 CRK20 MUR4 NSL1 AT3G52800 AT4G38940 PEPR1 TIP ACA2"," "]
["AT4G38940","AT4G38940.1","Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G10510.1); Has 1232 Blast hits to 1193 proteins in 71 species: Archae - 4; Bacteria - 55; Metazoa - 149; Fungi - 0; Plants - 1016; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","6.45e-12 ","30/65 (46.2%) ","2805/30324 (9.3%) ","AT1G68340 AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT1G16670 AT5G03380 AT3G57700 MYB96 AT3G57450 BIK1 AT5G62570 PUB12 NPR3 AT1G76600 AT3G62260 CRK20 MUR4 NSL1 AT3G52800 AT4G38940 PEPR1 TIP ACA2"," "]
["AT1G58420","AT1G58420.1","Uncharacterised conserved protein UCP031279; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031279 (InterPro:IPR016972); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031279 (TAIR:AT1G10140.1); Has 61 Blast hits to 61 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031347 regulation of defense response ","P ","2.01e-11 ","16/65 (24.6%) ","549/30324 (1.8%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT3G16510","AT3G16510.1","Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT4G15755.1); Has 24270 Blast hits to 15902 proteins in 854 species: Archae - 8; Bacteria - 1639; Metazoa - 9119; Fungi - 5377; Plants - 5202; Viruses - 451; Other Eukaryotes - 2474 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","2.08e-11 ","25/65 (38.5%) ","1879/30324 (6.2%) ","AT1G68340 AT3G19970 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT5G03380 MYB96 AT3G57450 BIK1 PUB12 NPR3 AT1G76600 AT3G62260 MUR4 NSL1 AT3G52800 AT4G38940 PEPR1 TIP ACA2"," "]
["AT1G67470","AT1G67470.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65250.1); Has 33748 Blast hits to 33462 proteins in 1596 species: Archae - 6; Bacteria - 3452; Metazoa - 6540; Fungi - 924; Plants - 20581; Viruses - 40; Other Eukaryotes - 2205 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","2.74e-11 ","18/65 (27.7%) ","792/30324 (2.6%) ","AT1G68340 AT3G19970 AT3G46600 SERK4 SYP121 MLO2 SUT2 AT5G03380 AT3G57450 BIK1 PUB12 NPR3 AT1G76600 AT3G62260 NSL1 AT3G52800 AT4G38940 ACA2"," "]
["AT1G65486","AT1G65486.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080134 regulation of response to stress ","P ","4.21e-11 ","16/65 (24.6%) ","576/30324 (1.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT1G61370","AT1G61370.1","S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61390.1); Has 120586 Blast hits to 118822 proteins in 4586 species: Archae - 110; Bacteria - 13732; Metazoa - 44218; Fungi - 9948; Plants - 34744; Viruses - 407; Other Eukaryotes - 17427 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","9.75e-11 ","42/65 (64.6%) ","6619/30324 (21.8%) ","VICTR AT1G55450 AT1G68340 AT3G19970 AT1G63750 AT2G40270 AT3G46600 AT1G70420 SERK4 SYP121 AT1G31540 CPK4 AT5G42050 AT1G33600 SEC1B MLO2 SUT2 AT4G28400 AT1G16670 AT5G03380 AT3G57700 MYB96 TIR AT1G56520 AT3G57450 BIK1 AT5G62570 PUB12 NPR3 PTI1-4 AT1G76600 AT3G62260 AT1G33610 CRK20 MUR4 NSL1 AT3G52800 AT4G38940 PEPR1 TIP AT5G47070 ACA2"," "]
["AT2G40270","AT2G40270.1","Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 40621 Blast hits to 40281 proteins in 1597 species: Archae - 8; Bacteria - 2197; Metazoa - 11172; Fungi - 1041; Plants - 22757; Viruses - 129; Other Eukaryotes - 3317 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","3.08e-10 ","18/65 (27.7%) ","914/30324 (3.0%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 PEPR1 AT5G47070 ACA2"," "]
["AT1G16670","AT1G16670.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006955 immune response ","P ","3.44e-10 ","18/65 (27.7%) ","920/30324 (3.0%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 PEPR1 AT5G47070 ACA2"," "]
["AT1G56520","AT1G56520.2","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G56510.1).","protein_coding",null,null," ","GO:0031348 negative regulation of defense response ","P ","4.77e-10 ","12/65 (18.5%) ","278/30324 (0.9%) ","AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 NPR3 NSL1"," "]
["AT4G01090","AT4G01090.1","Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT1G01440.1); Has 1545 Blast hits to 1451 proteins in 231 species: Archae - 0; Bacteria - 62; Metazoa - 476; Fungi - 316; Plants - 452; Viruses - 2; Other Eukaryotes - 237 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007165 signal transduction ","P ","7.53e-10 ","22/65 (33.8%) ","1618/30324 (5.3%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
["AT1G63750","AT1G63750.3","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G58120.1); Has 22087 Blast hits to 17235 proteins in 755 species: Archae - 13; Bacteria - 2137; Metazoa - 2175; Fungi - 113; Plants - 17053; Viruses - 13; Other Eukaryotes - 583 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009751 response to salicylic acid stimulus ","P ","1.19e-09 ","14/65 (21.5%) ","487/30324 (1.6%) ","AT3G19970 AT2G40270 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 MYB96 BIK1 NPR3 CRK20 NSL1"," "]
["AT3G19970","AT3G19970.1","alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048583 regulation of response to stimulus ","P ","1.30e-09 ","16/65 (24.6%) ","722/30324 (2.4%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT1G33610","AT1G33610.1","Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, phloem, root, petiole, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035556 intracellular signal transduction ","P ","1.75e-09 ","13/65 (20.0%) ","400/30324 (1.3%) ","AT3G46600 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 AT3G57450 AT1G76600 MUR4 NSL1 AT3G52800 PEPR1"," "]
["AT1G31540","AT1G31540.2","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044700 single organism signaling ","P ","2.33e-09 ","22/65 (33.8%) ","1713/30324 (5.6%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
["AT3G10720","AT3G10720.2","Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink).","protein_coding",null,null," ","GO:0023052 signaling ","P ","2.35e-09 ","22/65 (33.8%) ","1714/30324 (5.7%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
["AT5G25050","AT5G25050.1","Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25040.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051707 response to other organism ","P ","2.52e-09 ","21/65 (32.3%) ","1535/30324 (5.1%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT4G28400 AT1G16670 AT3G57700 AT3G57450 BIK1 PUB12 NPR3 CRK20 NSL1 TIP AT5G47070 ACA2"," "]
["AT1G70420","AT1G70420.1","Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009607 response to biotic stimulus ","P ","2.56e-09 ","21/65 (32.3%) ","1536/30324 (5.1%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT4G28400 AT1G16670 AT3G57700 AT3G57450 BIK1 PUB12 NPR3 CRK20 NSL1 TIP AT5G47070 ACA2"," "]
["AT1G55450","AT1G55450.2","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G54150.1).","protein_coding",null,null," ","GO:0045088 regulation of innate immune response ","P ","3.73e-09 ","13/65 (20.0%) ","425/30324 (1.4%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT1G32928","AT1G32928.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050776 regulation of immune response ","P ","3.96e-09 ","13/65 (20.0%) ","427/30324 (1.4%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT3G56880","AT3G56880.1","VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: calmodulin (CAM)-binding protein of 25 kDa (TAIR:AT2G41010.1); Has 109 Blast hits to 109 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002682 regulation of immune system process ","P ","4.32e-09 ","13/65 (20.0%) ","430/30324 (1.4%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT3G62260","AT3G62260.2","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071310 cellular response to organic substance ","P ","6.58e-09 ","19/65 (29.2%) ","1261/30324 (4.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 MUR4 NSL1 PEPR1 ACA2"," "]
["AT5G28630","AT5G28630.1","glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28610.1); Has 3156 Blast hits to 2062 proteins in 232 species: Archae - 6; Bacteria - 50; Metazoa - 1681; Fungi - 287; Plants - 258; Viruses - 160; Other Eukaryotes - 714 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009627 systemic acquired resistance ","P ","1.00e-08 ","13/65 (20.0%) ","460/30324 (1.5%) ","AT2G40270 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT1G18380","AT1G18380.1","similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67025.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95895.1)","protein_coding",null,null," ","GO:0012501 programmed cell death ","P ","1.00e-08 ","13/65 (20.0%) ","460/30324 (1.5%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 CRK20 NSL1 AT3G52800 ACA2"," "]
["AT3G52800","AT3G52800.1","A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1056 Blast hits to 1045 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 445; Fungi - 9; Plants - 478; Viruses - 6; Other Eukaryotes - 118 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009814 defense response, incompatible interaction ","P ","1.20e-08 ","14/65 (21.5%) ","579/30324 (1.9%) ","AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT5G66790","AT5G66790.1","Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","1.23e-08 ","12/65 (18.5%) ","367/30324 (1.2%) ","AT3G19970 AT2G40270 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 BIK1 NPR3 NSL1"," "]
["AT5G46520","AT5G46520.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46510.1); Has 17530 Blast hits to 12991 proteins in 492 species: Archae - 6; Bacteria - 943; Metazoa - 980; Fungi - 57; Plants - 15109; Viruses - 15; Other Eukaryotes - 420 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007154 cell communication ","P ","1.27e-08 ","23/65 (35.4%) ","2073/30324 (6.8%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 TH9 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
["AT1G76600","AT1G76600.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","1.31e-08 ","12/65 (18.5%) ","369/30324 (1.2%) ","AT3G19970 AT2G40270 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 BIK1 NPR3 NSL1"," "]
["AT5G47070","AT5G47070.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","1.48e-08 ","12/65 (18.5%) ","373/30324 (1.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT4G28400","AT4G28400.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: PP2C induced by AVRRPM1 (TAIR:AT2G20630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048585 negative regulation of response to stimulus ","P ","1.48e-08 ","12/65 (18.5%) ","373/30324 (1.2%) ","AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 NPR3 NSL1"," "]
["AT3G29010","AT3G29010.1","Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","1.64e-08 ","30/65 (46.2%) ","3789/30324 (12.5%) ","AT1G68340 AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT1G16670 AT5G03380 AT3G57700 MYB96 AT3G57450 BIK1 AT5G62570 PUB12 NPR3 AT1G76600 AT3G62260 CRK20 MUR4 NSL1 AT3G52800 AT4G38940 PEPR1 TIP ACA2"," "]
["AT1G61460","AT1G61460.1","S-locus protein kinase, putative; FUNCTIONS IN: carbohydrate binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: PAN-2 domain (InterPro:IPR013227), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61420.1); Has 110853 Blast hits to 109563 proteins in 4182 species: Archae - 79; Bacteria - 11198; Metazoa - 41616; Fungi - 9137; Plants - 32970; Viruses - 298; Other Eukaryotes - 15555 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006612 protein targeting to membrane ","P ","1.67e-08 ","12/65 (18.5%) ","377/30324 (1.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT1G68340","AT1G68340.1","Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G25370.1); Has 250 Blast hits to 250 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0090150 establishment of protein localization to membrane ","P ","1.78e-08 ","12/65 (18.5%) ","379/30324 (1.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT3G46600","AT3G46600.1","GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G59450.1); Has 2508 Blast hits to 2402 proteins in 303 species: Archae - 0; Bacteria - 7; Metazoa - 2; Fungi - 0; Plants - 2499; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072657 protein localization to membrane ","P ","1.78e-08 ","12/65 (18.5%) ","379/30324 (1.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT2G41835","AT2G41835.1","zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080135 regulation of cellular response to stress ","P ","2.27e-08 ","12/65 (18.5%) ","387/30324 (1.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT4G12120","AT4G12120.1","member of KEULE Gene Family","protein_coding"," (SEC1B)"," (ATSEC1B); (SEC1B)"," ","GO:0043067 regulation of programmed cell death ","P ","3.22e-08 ","12/65 (18.5%) ","399/30324 (1.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT2G39660","AT2G39660.1","Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection.  It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.","protein_coding","BOTRYTIS-INDUCED KINASE1 (BIK1)","BOTRYTIS-INDUCED KINASE1 (BIK1)"," ","GO:0016265 death ","P ","3.42e-08 ","13/65 (20.0%) ","508/30324 (1.7%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 CRK20 NSL1 AT3G52800 ACA2"," "]
["AT4G37640","AT4G37640.1","Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum.  Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.","protein_coding","CALCIUM ATPASE 2 (ACA2)","CALCIUM ATPASE 2 (ACA2)"," ","GO:0008219 cell death ","P ","3.42e-08 ","13/65 (20.0%) ","508/30324 (1.7%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 CRK20 NSL1 AT3G52800 ACA2"," "]
["AT4G09570","AT4G09570.1","Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.","protein_coding","CALCIUM-DEPENDENT PROTEIN KINASE 4 (CPK4)"," (ATCPK4);CALCIUM-DEPENDENT PROTEIN KINASE 4 (CPK4)"," ","GO:0009626 plant-type hypersensitive response ","P ","3.94e-08 ","12/65 (18.5%) ","406/30324 (1.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT4G23280","AT4G23280.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 20 (CRK20)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 20 (CRK20)"," ","GO:0034050 host programmed cell death induced by symbiont ","P ","4.05e-08 ","12/65 (18.5%) ","407/30324 (1.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT4G39650","AT4G39650.1","The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the apoplast of young siliques (within the ovules of the carpel) and is involved in the degradation of glutathione. The encoded enzyme also acts as part of a GSH pumping gamma-glutamyl cycle in this tissue and may also be involved in gamma-glutamyl amino acid formation.","protein_coding","GAMMA-GLUTAMYL TRANSPEPTIDASE 2 (GGT2)","GAMMA-GLUTAMYL TRANSPEPTIDASE 2 (GGT2)"," ","GO:0010941 regulation of cell death ","P ","4.05e-08 ","12/65 (18.5%) ","407/30324 (1.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT1G21120","AT1G21120.1","O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21110.1); Has 3310 Blast hits to 3305 proteins in 577 species: Archae - 1; Bacteria - 921; Metazoa - 104; Fungi - 640; Plants - 1542; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).","protein_coding","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 2 (IGMT2)","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 2 (IGMT2)"," ","GO:0052542 defense response by callose deposition ","P ","4.92e-08 ","7/65 (10.8%) ","63/30324 (0.2%) ","AT3G19970 SEC1B AT5G62570 NPR3 MUR4 NSL1 PEPR1"," "]
["AT1G11310","AT1G11310.1","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in  A. thaliana does not involve the signaling molecules ethylene,  jasmonic acid or salicylic acid, but requires a syntaxin,  glycosyl hydrolase and ABC transporter.","protein_coding","MILDEW RESISTANCE LOCUS O 2 (MLO2)","MILDEW RESISTANCE LOCUS O 2 (MLO2);POWDERY MILDEW RESISTANT 2 (PMR2);MILDEW RESISTANCE LOCUS O 2 (ATMLO2)"," ","GO:0070887 cellular response to chemical stimulus ","P ","6.77e-08 ","19/65 (29.2%) ","1445/30324 (4.8%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 MUR4 NSL1 PEPR1 ACA2"," "]
["AT1G30620","AT1G30620.1","encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.","protein_coding","MURUS 4 (MUR4)","UDP-D-XYLOSE 4-EPIMERASE 1 (UXE1);MURUS 4 (MUR4);HIGH SUGAR RESPONSE8 (HSR8)"," ","GO:0071407 cellular response to organic cyclic compound ","P ","9.30e-08 ","13/65 (20.0%) ","551/30324 (1.8%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 BIK1 NPR3 NSL1"," "]
["AT5G62470","AT5G62470.2","Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response.","protein_coding","MYB DOMAIN PROTEIN 96 (MYB96)","MYB DOMAIN PROTEIN 96 (MYB96)"," ","GO:1901701 cellular response to oxygen-containing compound ","P ","1.02e-07 ","16/65 (24.6%) ","969/30324 (3.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 NPR3 MUR4 NSL1 PEPR1"," "]
["AT1G28380","AT1G28380.1","This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.","protein_coding","NECROTIC SPOTTED LESIONS 1 (NSL1)","NECROTIC SPOTTED LESIONS 1 (NSL1)"," ","GO:0051704 multi-organism process ","P ","1.41e-07 ","21/65 (32.3%) ","1905/30324 (6.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 AT4G28400 AT1G16670 AT3G57700 AT3G57450 BIK1 PUB12 NPR3 CRK20 NSL1 TIP AT5G47070 ACA2"," "]
["AT5G45110","AT5G45110.1","Encodes a paralog of NPR1.  Involved in negative regulation of defense responses against bacterial and oomycete pathogens.  npr3 mutants has elevated level of PR1 expression.  Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.","protein_coding","NPR1-LIKE PROTEIN 3 (NPR3)","NPR1-LIKE PROTEIN 3 (NPR3); (ATNPR3)"," ","GO:0014070 response to organic cyclic compound ","P ","1.99e-07 ","15/65 (23.1%) ","860/30324 (2.8%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 MYB96 BIK1 NPR3 CRK20 NSL1"," "]
["AT1G73080","AT1G73080.1","Encodes a leucine-rich repeat receptor kinase.  Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks.","protein_coding","PEP1 RECEPTOR 1 (PEPR1)","PEP1 RECEPTOR 1 (ATPEPR1);PEP1 RECEPTOR 1 (PEPR1)"," ","GO:0009697 salicylic acid biosynthetic process ","P ","4.62e-07 ","9/65 (13.8%) ","210/30324 (0.7%) ","SYP121 CPK4 MLO2 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT2G28830","AT2G28830.1","Encodes a U-box E3 ubiquitin ligase involved in ubiquitination of pattern recognition receptor FLS2.","protein_coding","PLANT U-BOX 12 (PUB12)","PLANT U-BOX 12 (PUB12); (AtPUB12)"," ","GO:0009696 salicylic acid metabolic process ","P ","7.85e-07 ","9/65 (13.8%) ","223/30324 (0.7%) ","SYP121 CPK4 MLO2 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT2G47060","AT2G47060.4","Encodes Pto-interacting 1-4 (PTI1-4), a member of the PTI1-like serine/threonine protein kinases that share strong sequence identity to the tomato PTI1 kinase.","protein_coding","PTO-INTERACTING 1-4 (PTI1-4)","PTO-INTERACTING 1-4 (PTI1-4)"," ","GO:0052545 callose localization ","P ","1.00e-06 ","7/65 (10.8%) ","96/30324 (0.3%) ","AT3G19970 SEC1B AT5G62570 NPR3 MUR4 NSL1 PEPR1"," "]
["AT4G01750","AT4G01750.1","Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the <i>O</i>-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT2 protein might be involved in the synthesis of the &alpha;-D-Xyl-(1,3)-&alpha;-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II.","protein_coding","RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 2 (RGXT2)","RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 2 (RGXT2)"," ","GO:0033037 polysaccharide localization ","P ","1.08e-06 ","7/65 (10.8%) ","97/30324 (0.3%) ","AT3G19970 SEC1B AT5G62570 NPR3 MUR4 NSL1 PEPR1"," "]
["AT2G13790","AT2G13790.1","somatic embryogenesis receptor-like kinase 4 (SERK4); FUNCTIONS IN: protein kinase activity, transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: rosette leaf, cauline leaf, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 5 (TAIR:AT2G13800.1); Has 172318 Blast hits to 120437 proteins in 4454 species: Archae - 129; Bacteria - 14524; Metazoa - 44355; Fungi - 9158; Plants - 84468; Viruses - 411; Other Eukaryotes - 19273 (source: NCBI BLink).","protein_coding","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (ATSERK4);BRI1-  ASSOCIATED KINASE 7 (BAK7);BAK1-LIKE 1 (BKK1);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4)"," ","GO:0044802 single-organism membrane organization ","P ","2.12e-06 ","12/65 (18.5%) ","577/30324 (1.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT2G13800","AT2G13800.1","somatic embryogenesis receptor-like kinase 5 (SERK5); FUNCTIONS IN: protein kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 5 (SERK5)","SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5 (ATSERK5);BRI1- ASSOCIATED KINASE 8 (BAK8);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 5 (SERK5)"," ","GO:0061024 membrane organization ","P ","2.12e-06 ","12/65 (18.5%) ","577/30324 (1.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
["AT2G02860","AT2G02860.1","encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.","protein_coding","SUCROSE TRANSPORTER 2 (SUT2)"," (ATSUT2);SUCROSE TRANSPORTER 3 (SUC3);ARABIDOPSIS THALIANA SUCROSE TRANSPORTER 3 (ATSUC3);SUCROSE TRANSPORTER 2 (SUT2)"," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","2.25e-06 ","12/65 (18.5%) ","580/30324 (1.9%) ","AT3G19970 SYP121 CPK4 MLO2 SUT2 AT1G16670 AT3G57700 AT3G57450 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT3G11820","AT3G11820.1","Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1).  SYR1/PEN1 is a member of the SNARE superfamily proteins.  SNARE proteins are involved in cell signaling, vesicle traffic, growth and development.  SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling.  Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei.  SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. The syp121 point mutation results in stomatal phenotypes that reduce CO2 assimilation, slow vegetative growth and increase water use efficiency in the whole plant, conditional upon high light intensities and low relative humidity.","protein_coding","SYNTAXIN OF PLANTS 121 (SYP121)","SYNTAXIN RELATED PROTEIN 1 (SYR1);SYNTAXIN RELATED PROTEIN 1 (ATSYR1);PENETRATION1 (PEN1);SYNTAXIN OF PLANTS 121 (SYP121); (AT-SYR1); (ATSYP121)"," ","GO:0042537 benzene-containing compound metabolic process ","P ","3.01e-06 ","9/65 (13.8%) ","260/30324 (0.9%) ","SYP121 CPK4 MLO2 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
["AT5G24590","AT5G24590.2","Member of NAc protein family. Interacts with  turnip crinkle virus (TCV) capsid protein. Transcription factor  involved in regulating the defense response of Arabidopsis to TCV.","protein_coding","TCV-INTERACTING PROTEIN (TIP)","TCV-INTERACTING PROTEIN (TIP);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 91 (ANAC091)"," ","GO:0006984 ER-nucleus signaling pathway ","P ","5.89e-06 ","8/65 (12.3%) ","194/30324 (0.6%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 NSL1 ACA2"," "]
["AT3G08710","AT3G08710.1","Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.","protein_coding","THIOREDOXIN H-TYPE 9 (TH9)","THIOREDOXIN H-TYPE 9 (ATH9);THIOREDOXIN H-TYPE 9 (TH9);THIOREDOXIN TYPE H 9 (TRX H9)"," ","GO:0009755 hormone-mediated signaling pathway ","P ","7.69e-06 ","13/65 (20.0%) ","795/30324 (2.6%) ","AT3G19970 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT3G57450 NPR3 AT1G76600 MUR4 NSL1 PEPR1"," "]
["AT1G72930","AT1G72930.1","Toll/interleukin-1 receptor-like protein (TIR) mRNA,","protein_coding","TOLL/INTERLEUKIN-1 RECEPTOR-LIKE (TIR)","TOLL/INTERLEUKIN-1 RECEPTOR-LIKE (TIR)"," ","GO:0033036 macromolecule localization ","P ","1.18e-05 ","16/65 (24.6%) ","1350/30324 (4.5%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 AT5G62570 NPR3 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
["AT1G16110","AT1G16110.1","WAK-like kinase","protein_coding","WALL ASSOCIATED KINASE-LIKE 6 (WAKL6)","WALL ASSOCIATED KINASE-LIKE 6 (WAKL6)"," ","GO:0032870 cellular response to hormone stimulus ","P ","1.35e-05 ","13/65 (20.0%) ","834/30324 (2.8%) ","AT3G19970 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT3G57450 NPR3 AT1G76600 MUR4 NSL1 PEPR1"," "]
[{"$nulls":6}," ","GO:0071495 cellular response to endogenous stimulus ","P ","1.45e-05 ","13/65 (20.0%) ","839/30324 (2.8%) ","AT3G19970 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT3G57450 NPR3 AT1G76600 MUR4 NSL1 PEPR1"," "]
[{"$nulls":6}," ","GO:0009620 response to fungus ","P ","1.84e-05 ","11/65 (16.9%) ","560/30324 (1.8%) ","AT3G19970 SYP121 AT5G42050 MLO2 SUT2 AT3G57700 AT3G57450 BIK1 NPR3 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0051716 cellular response to stimulus ","P ","2.69e-05 ","22/65 (33.8%) ","2811/30324 (9.3%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
[{"$nulls":6}," ","GO:0033554 cellular response to stress ","P ","3.98e-05 ","16/65 (24.6%) ","1474/30324 (4.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57450 BIK1 AT5G62570 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0009753 response to jasmonic acid stimulus ","P ","5.04e-05 ","10/65 (15.4%) ","482/30324 (1.6%) ","AT3G19970 SYP121 AT5G42050 AT1G33600 MLO2 SUT2 AT3G57450 NPR3 NSL1 PEPR1"," "]
[{"$nulls":6}," ","GO:0043069 negative regulation of programmed cell death ","P ","5.13e-05 ","7/65 (10.8%) ","169/30324 (0.6%) ","SERK4 SYP121 AT5G42050 BIK1 NPR3 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0060548 negative regulation of cell death ","P ","6.02e-05 ","7/65 (10.8%) ","173/30324 (0.6%) ","SERK4 SYP121 AT5G42050 BIK1 NPR3 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway ","P ","6.40e-05 ","8/65 (12.3%) ","264/30324 (0.9%) ","AT2G40270 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 NPR3 NSL1"," "]
[{"$nulls":6}," ","GO:0030968 endoplasmic reticulum unfolded protein response ","P ","9.87e-05 ","7/65 (10.8%) ","186/30324 (0.6%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 ACA2"," "]
[{"$nulls":6}," ","GO:0035967 cellular response to topologically incorrect protein ","P ","1.06e-04 ","7/65 (10.8%) ","188/30324 (0.6%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 ACA2"," "]
[{"$nulls":6}," ","GO:0034620 cellular response to unfolded protein ","P ","1.06e-04 ","7/65 (10.8%) ","188/30324 (0.6%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 ACA2"," "]
[{"$nulls":6}," ","GO:0006986 response to unfolded protein ","P ","1.06e-04 ","7/65 (10.8%) ","188/30324 (0.6%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 ACA2"," "]
[{"$nulls":6}," ","GO:0015031 protein transport ","P ","1.12e-04 ","13/65 (20.0%) ","1001/30324 (3.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0045184 establishment of protein localization ","P ","1.12e-04 ","13/65 (20.0%) ","1001/30324 (3.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0045730 respiratory burst ","P ","1.67e-04 ","6/65 (9.2%) ","122/30324 (0.4%) ","AT3G46600 SYP121 BIK1 AT1G76600 NSL1 AT3G52800"," "]
[{"$nulls":6}," ","GO:0002679 respiratory burst involved in defense response ","P ","1.67e-04 ","6/65 (9.2%) ","122/30324 (0.4%) ","AT3G46600 SYP121 BIK1 AT1G76600 NSL1 AT3G52800"," "]
[{"$nulls":6}," ","GO:0009725 response to hormone stimulus ","P ","2.03e-04 ","16/65 (24.6%) ","1662/30324 (5.5%) ","AT3G19970 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 SUT2 MYB96 AT3G57450 NPR3 AT1G76600 MUR4 NSL1 PEPR1 TIP"," "]
[{"$nulls":6}," ","GO:0008104 protein localization ","P ","2.11e-04 ","13/65 (20.0%) ","1058/30324 (3.5%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0071702 organic substance transport ","P ","2.31e-04 ","16/65 (24.6%) ","1678/30324 (5.5%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 AT4G01090 SUT2 GGT2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0006605 protein targeting ","P ","2.46e-04 ","12/65 (18.5%) ","892/30324 (2.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:1901617 organic hydroxy compound biosynthetic process ","P ","2.68e-04 ","10/65 (15.4%) ","578/30324 (1.9%) ","AT3G10720 SYP121 CPK4 MLO2 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0048519 negative regulation of biological process ","P ","3.10e-04 ","14/65 (21.5%) ","1290/30324 (4.3%) ","AT2G40270 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT4G28400 AT1G16670 AT3G57700 BIK1 NPR3 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0000165 MAPK cascade ","P ","3.27e-04 ","7/65 (10.8%) ","222/30324 (0.7%) ","SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 NSL1"," "]
[{"$nulls":6}," ","GO:0007243 intracellular protein kinase cascade ","P ","3.47e-04 ","7/65 (10.8%) ","224/30324 (0.7%) ","SERK4 SYP121 AT5G42050 AT1G33600 MLO2 AT3G57700 NSL1"," "]
[{"$nulls":6}," ","GO:0009617 response to bacterium ","P ","4.38e-04 ","10/65 (15.4%) ","610/30324 (2.0%) ","AT2G40270 SERK4 SYP121 AT1G33600 MLO2 AT3G57700 PUB12 NPR3 CRK20 NSL1"," "]
[{"$nulls":6}," ","GO:0006886 intracellular protein transport ","P ","5.16e-04 ","12/65 (18.5%) ","957/30324 (3.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0034976 response to endoplasmic reticulum stress ","P ","5.79e-04 ","8/65 (12.3%) ","353/30324 (1.2%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0034613 cellular protein localization ","P ","6.41e-04 ","12/65 (18.5%) ","977/30324 (3.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0070727 cellular macromolecule localization ","P ","9.16e-04 ","12/65 (18.5%) ","1011/30324 (3.3%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0050832 defense response to fungus ","P ","1.06e-03 ","8/65 (12.3%) ","383/30324 (1.3%) ","SYP121 AT5G42050 MLO2 AT3G57700 BIK1 NPR3 NSL1 ACA2"," "]
[{"$nulls":6}," ","GO:0016053 organic acid biosynthetic process ","P ","1.57e-03 ","12/65 (18.5%) ","1065/30324 (3.5%) ","AT3G19970 SYP121 CPK4 MLO2 SUT2 AT1G16670 AT3G57700 AT3G57450 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0046394 carboxylic acid biosynthetic process ","P ","1.57e-03 ","12/65 (18.5%) ","1065/30324 (3.5%) ","AT3G19970 SYP121 CPK4 MLO2 SUT2 AT1G16670 AT3G57700 AT3G57450 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0002252 immune effector process ","P ","1.69e-03 ","7/65 (10.8%) ","284/30324 (0.9%) ","AT3G46600 SYP121 BIK1 AT1G76600 NSL1 AT3G52800 TIP"," "]
[{"$nulls":6}," ","GO:0009867 jasmonic acid mediated signaling pathway ","P ","2.02e-03 ","7/65 (10.8%) ","292/30324 (1.0%) ","AT3G19970 SYP121 AT5G42050 AT1G33600 MLO2 NPR3 NSL1"," "]
[{"$nulls":6}," ","GO:0071395 cellular response to jasmonic acid stimulus ","P ","2.02e-03 ","7/65 (10.8%) ","292/30324 (1.0%) ","AT3G19970 SYP121 AT5G42050 AT1G33600 MLO2 NPR3 NSL1"," "]
[{"$nulls":6}," ","GO:0097306 cellular response to alcohol ","P ","2.87e-03 ","7/65 (10.8%) ","308/30324 (1.0%) ","SERK4 SYP121 CPK4 AT5G42050 AT3G57450 MUR4 PEPR1"," "]
[{"$nulls":6}," ","GO:1901615 organic hydroxy compound metabolic process ","P ","3.12e-03 ","10/65 (15.4%) ","760/30324 (2.5%) ","AT3G10720 SYP121 CPK4 MLO2 AT1G16670 AT3G57700 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0044283 small molecule biosynthetic process ","P ","4.24e-03 ","13/65 (20.0%) ","1387/30324 (4.6%) ","AT3G10720 AT3G19970 SYP121 CPK4 MLO2 SUT2 AT1G16670 AT3G57700 AT3G57450 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0051649 establishment of localization in cell ","P ","4.30e-03 ","13/65 (20.0%) ","1389/30324 (4.6%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0032787 monocarboxylic acid metabolic process ","P ","4.32e-03 ","12/65 (18.5%) ","1176/30324 (3.9%) ","AT3G19970 SYP121 CPK4 MLO2 SUT2 AT1G16670 AT3G57700 AT3G57450 NPR3 NSL1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0050794 regulation of cellular process ","P ","4.88e-03 ","23/65 (35.4%) ","4116/30324 (13.6%) ","AT3G19970 AT2G40270 AT3G46600 SERK4 SYP121 CPK4 AT5G42050 AT1G33600 MLO2 AT1G16670 AT3G57700 MYB96 AT3G57450 BIK1 AT5G62570 NPR3 AT1G76600 AT1G33610 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
[{"$nulls":6}," ","GO:0051179 localization ","P ","7.23e-03 ","20/65 (30.8%) ","3295/30324 (10.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 AT4G01090 SUT2 GGT2 BIK1 AT5G62570 NPR3 AT5G25050 MUR4 NSL1 AT3G52800 PEPR1 ACA2"," "]
[{"$nulls":6}," ","GO:0051641 cellular localization ","P ","8.79e-03 ","13/65 (20.0%) ","1485/30324 (4.9%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 SEC1B MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0046907 intracellular transport ","P ","8.92e-03 ","12/65 (18.5%) ","1264/30324 (4.2%) ","AT3G19970 AT2G40270 SERK4 SYP121 AT5G42050 AT1G33600 MLO2 BIK1 NPR3 NSL1 AT3G52800 ACA2"," "]
[{"$nulls":6}," ","GO:0035966 response to topologically incorrect protein ","P ","9.46e-03 ","7/65 (10.8%) ","370/30324 (1.2%) ","SYP121 CPK4 AT5G42050 AT1G16670 AT3G57450 AT5G62570 ACA2"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," "," ",{"$nulls":5}," "]
[{"$nulls":6}," ","Cellular Component",{"$nulls":5}," "]
[{"$nulls":6}," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
[{"$nulls":6}," ","GO:0005886 plasma membrane ","C ","3.60e-04 ","22/65 (33.8%) ","3258/30324 (10.7%) ","AT1G61460 AT2G40270 AT1G67470 SERK4 SYP121 AT1G33600 SEC1B MLO2 AT1G69840 SUT2 GGT2 TH9 AT1G16670 AT5G03380 BIK1 SERK5 PTI1-4 AT1G33610 AT1G61370 PEPR1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ","GO:0071944 cell periphery ","C ","9.13e-04 ","23/65 (35.4%) ","3734/30324 (12.3%) ","AT3G10720 AT1G61460 AT2G40270 AT1G67470 SERK4 SYP121 AT1G33600 SEC1B MLO2 AT1G69840 SUT2 GGT2 TH9 AT1G16670 AT5G03380 BIK1 SERK5 PTI1-4 AT1G33610 AT1G61370 PEPR1 AT5G47070 ACA2"," "]
[{"$nulls":6}," ",{"$nulls":6}," "]
[{"$nulls":6}," "," ",{"$nulls":5}," "]
[{"$nulls":6}," ","Molecular Function",{"$nulls":5}," "]
[{"$nulls":6}," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
[{"$nulls":6}," ","GO:0016301 kinase activity ","F ","5.52e-06 ","16/65 (24.6%) ","1279/30324 (4.2%) ","AT1G61460 AT2G40270 AT1G67470 SERK4 CPK4 AT1G16670 AT3G57700 BIK1 WAKL6 SERK5 PTI1-4 CRK20 AT5G66790 AT1G61370 PEPR1 AT5G47070"," "]
[{"$nulls":6}," ","GO:0016772 transferase activity, transferring phosphorus-containing groups ","F ","2.91e-05 ","16/65 (24.6%) ","1441/30324 (4.8%) ","AT1G61460 AT2G40270 AT1G67470 SERK4 CPK4 AT1G16670 AT3G57700 BIK1 WAKL6 SERK5 PTI1-4 CRK20 AT5G66790 AT1G61370 PEPR1 AT5G47070"," "]
[{"$nulls":6}," ","GO:0016740 transferase activity ","F ","8.08e-04 ","19/65 (29.2%) ","2589/30324 (8.5%) ","AT1G61460 AT2G40270 RGXT2 AT1G67470 SERK4 CPK4 GGT2 AT1G16670 AT3G57700 BIK1 WAKL6 SERK5 PTI1-4 IGMT2 CRK20 AT5G66790 AT1G61370 PEPR1 AT5G47070"," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G06035","AT3G06035.1","Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19250.1); Has 86 Blast hits to 85 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT4G23670","AT4G23670.1","Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, defense response to bacterium; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G23680.1); Has 355 Blast hits to 331 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 355; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G11310","AT4G11310.1","cysteine proteinase precursor-like protein","protein_coding",null,null," ","GO:0019748 secondary metabolic process ","P ","1.26e-16 ","25/105 (23.8%) ","638/30324 (2.1%) ","CYP81F4 SOT18 AT1G77530 BGLU21 APR1 TT4 CYP83A1 MAM1 BAT5 PRR1 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 GSTU26 GSTU20 CB5-C PMEAMT CYP79B3 GSTF12 CYP79F2 FAH1 CYP81F3 GSTF14"," "]
["AT1G23720","AT1G23720.1","Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; EXPRESSED IN: hypocotyl, root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G13390.1); Has 541802 Blast hits to 61860 proteins in 2130 species: Archae - 1218; Bacteria - 96253; Metazoa - 194950; Fungi - 87318; Plants - 78001; Viruses - 13090; Other Eukaryotes - 70972 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016143 S-glycoside metabolic process ","P ","5.66e-13 ","15/105 (14.3%) ","208/30324 (0.7%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 CYP81F3"," "]
["AT1G77530","AT1G77530.1","O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 3283 Blast hits to 3279 proteins in 572 species: Archae - 3; Bacteria - 854; Metazoa - 104; Fungi - 647; Plants - 1564; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019760 glucosinolate metabolic process ","P ","5.66e-13 ","15/105 (14.3%) ","208/30324 (0.7%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 CYP81F3"," "]
["AT1G54010","AT1G54010.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54000.1); Has 3090 Blast hits to 3062 proteins in 114 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 2943; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019757 glycosinolate metabolic process ","P ","5.66e-13 ","15/105 (14.3%) ","208/30324 (0.7%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 CYP81F3"," "]
["AT5G40510","AT5G40510.1","Sucrase/ferredoxin-like family protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT3G27570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044550 secondary metabolite biosynthetic process ","P ","2.00e-11 ","16/105 (15.2%) ","322/30324 (1.1%) ","SOT18 AT1G77530 APR1 TT4 CYP83A1 MAM1 BAT5 PRR1 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 FAH1"," "]
["AT5G23820","AT5G23820.1","MD-2-related lipid recognition domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172); BEST Arabidopsis thaliana protein match is: MD-2-related lipid recognition domain-containing protein (TAIR:AT5G23840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006790 sulfur compound metabolic process ","P ","5.61e-11 ","19/105 (18.1%) ","558/30324 (1.8%) ","CYP81F4 SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 CYP81F3 MSRB5"," "]
["AT1G58280","AT1G58280.2","Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8); Has 412 Blast hits to 412 proteins in 84 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 152; Plants - 162; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901657 glycosyl compound metabolic process ","P ","3.64e-10 ","15/105 (14.3%) ","323/30324 (1.1%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 CYP81F3"," "]
["AT5G37970","AT5G37970.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G37990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044711 single-organism biosynthetic process ","P ","4.44e-10 ","28/105 (26.7%) ","1589/30324 (5.2%) ","AT4G29270 SOT18 AT5G38020 NAS4 AT3G57010 PRP4 AT4G23670 AT1G77530 AT1G55260 APR1 TT4 CYP83A1 AT1G77330 MAM1 BAT5 AGP22 PRR1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 CYP79F2 FAH1 MSRB5"," "]
["AT4G03926","AT4G03926.1","pseudogene, similar to Pectinesterase 3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3). (Tomato), blastp match of 61% identity and 9.6e-28 P-value to SP|Q96576|PME3_LYCES Pectinesterase 3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3). (Tomato) {Lycopersicon esculentum}","pseudogene",null,null," ","GO:0044710 single-organism metabolic process ","P ","5.62e-10 ","42/105 (40.0%) ","3733/30324 (12.3%) ","AT4G29270 CYP81F4 AT4G29700 SOT18 AT5G38020 NAS4 CHIL AT3G57010 PRP4 AT4G23670 AT1G77530 AT1G55260 BGLU21 APR1 TT4 CYP83A1 FUM2 AT1G77330 MAM1 BAT5 AGP22 PRR1 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 UXS6 GSTU26 GSTU20 CB5-C PMEAMT CYP79B3 GSTF12 FLS1 CYP79F2 FAH1 TLL1 CYP81F3 ML3 GSTF14 MSRB5"," "]
["AT3G09925","AT3G09925.1","Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G05500.1); Has 222 Blast hits to 222 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019758 glycosinolate biosynthetic process ","P ","9.51e-10 ","12/105 (11.4%) ","175/30324 (0.6%) ","SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2"," "]
["AT2G40460","AT2G40460.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019761 glucosinolate biosynthetic process ","P ","9.51e-10 ","12/105 (11.4%) ","175/30324 (0.6%) ","SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2"," "]
["AT2G46535","AT2G46535.1","unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016144 S-glycoside biosynthetic process ","P ","9.51e-10 ","12/105 (11.4%) ","175/30324 (0.6%) ","SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2"," "]
["AT5G22860","AT5G22860.1","Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1224 Blast hits to 1198 proteins in 170 species: Archae - 0; Bacteria - 11; Metazoa - 605; Fungi - 185; Plants - 238; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042430 indole-containing compound metabolic process ","P ","3.60e-09 ","11/105 (10.5%) ","148/30324 (0.5%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3 CYP81F3"," "]
["AT5G38020","AT5G38020.1","encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)","protein_coding",null,null," ","GO:0044272 sulfur compound biosynthetic process ","P ","7.20e-09 ","16/105 (15.2%) ","474/30324 (1.6%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2 MSRB5"," "]
["AT4G22212","AT4G22212.1","Encodes a defensin-like (DEFL) family protein.","protein_coding",null,null," ","GO:1901659 glycosyl compound biosynthetic process ","P ","9.16e-09 ","12/105 (11.4%) ","212/30324 (0.7%) ","SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2"," "]
["AT1G14250","AT1G14250.1","GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14240.4); Has 1463 Blast hits to 1456 proteins in 234 species: Archae - 0; Bacteria - 39; Metazoa - 610; Fungi - 315; Plants - 332; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042446 hormone biosynthetic process ","P ","1.46e-08 ","13/105 (12.4%) ","280/30324 (0.9%) ","AT4G29270 SOT18 AT3G57010 APR1 CYP83A1 AT1G77330 MAM1 AGP22 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT1G14120","AT1G14120.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14130.1); Has 6316 Blast hits to 6255 proteins in 769 species: Archae - 0; Bacteria - 698; Metazoa - 67; Fungi - 416; Plants - 4549; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901605 alpha-amino acid metabolic process ","P ","7.84e-08 ","16/105 (15.2%) ","557/30324 (1.8%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C CYP79B3 ML3 MSRB5"," "]
["AT1G22065","AT1G22065.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010817 regulation of hormone levels ","P ","8.35e-08 ","15/105 (14.3%) ","474/30324 (1.6%) ","RGF9 AT4G29270 SOT18 AT3G57010 APR1 TT4 CYP83A1 AT1G77330 MAM1 AGP22 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT4G27560","AT4G27560.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: response to salt stress, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G27570.1); Has 5043 Blast hits to 5008 proteins in 241 species: Archae - 0; Bacteria - 56; Metazoa - 380; Fungi - 15; Plants - 4575; Viruses - 3; Other Eukaryotes - 14 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009069 serine family amino acid metabolic process ","P ","8.59e-08 ","12/105 (11.4%) ","257/30324 (0.8%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 CYP79B3 ML3 MSRB5"," "]
["AT4G22513","AT4G22513.1","Encodes a Protease inhibitor/seed storage/LTP family protein","protein_coding",null,null," ","GO:0042445 hormone metabolic process ","P ","1.12e-07 ","13/105 (12.4%) ","330/30324 (1.1%) ","AT4G29270 SOT18 AT3G57010 APR1 CYP83A1 AT1G77330 MAM1 AGP22 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT4G29270","AT4G29270.1","HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase  (TAIR:AT4G29260.1); Has 719 Blast hits to 714 proteins in 195 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 0; Plants - 383; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019344 cysteine biosynthetic process ","P ","1.23e-07 ","11/105 (10.5%) ","205/30324 (0.7%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 CYP79B3 MSRB5"," "]
["AT2G38390","AT2G38390.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G38380.1); Has 4338 Blast hits to 4309 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 52; Plants - 4237; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009684 indoleacetic acid biosynthetic process ","P ","1.34e-07 ","9/105 (8.6%) ","109/30324 (0.4%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT3G58550","AT3G58550.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 502 Blast hits to 498 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006534 cysteine metabolic process ","P ","1.36e-07 ","11/105 (10.5%) ","207/30324 (0.7%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 CYP79B3 MSRB5"," "]
["AT1G06090","AT1G06090.1","Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT1G06120.1); Has 3429 Blast hits to 3429 proteins in 832 species: Archae - 0; Bacteria - 1555; Metazoa - 791; Fungi - 234; Plants - 106; Viruses - 4; Other Eukaryotes - 739 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009683 indoleacetic acid metabolic process ","P ","1.46e-07 ","9/105 (8.6%) ","110/30324 (0.4%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT3G30280","AT3G30280.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1); Has 2342 Blast hits to 2327 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 49; Plants - 2289; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009070 serine family amino acid biosynthetic process ","P ","1.51e-07 ","11/105 (10.5%) ","209/30324 (0.7%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 CYP79B3 MSRB5"," "]
["AT1G77330","AT1G77330.1","similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)","protein_coding",null,null," ","GO:0009851 auxin biosynthetic process ","P ","4.28e-07 ","9/105 (8.6%) ","124/30324 (0.4%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT1G23140","AT1G23140.1","Expression is upregulated in the shoot of cax1/cax3 mutant.","protein_coding",null,null," ","GO:0006520 cellular amino acid metabolic process ","P ","8.20e-07 ","17/105 (16.2%) ","756/30324 (2.5%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 ML3 MSRB5"," "]
["AT1G11460","AT1G11460.1","nodulin MtN21-like transporter family protein","protein_coding",null,null," ","GO:0042435 indole-containing compound biosynthetic process ","P ","8.55e-07 ","9/105 (8.6%) ","134/30324 (0.4%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT1G66100","AT1G66100.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.","protein_coding",null,null," ","GO:0044283 small molecule biosynthetic process ","P ","1.52e-06 ","22/105 (21.0%) ","1387/30324 (4.6%) ","AT4G29270 SOT18 AT5G38020 NAS4 AT3G57010 PRP4 AT4G23670 AT1G55260 APR1 TT4 CYP83A1 AT1G77330 MAM1 AGP22 SUR1 IMD1 IPMI2 GSTU20 CB5-C PMEAMT CYP79B3 MSRB5"," "]
["AT4G15390","AT4G15390.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2282 Blast hits to 2273 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 35; Plants - 2239; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009850 auxin metabolic process ","P ","1.62e-06 ","9/105 (8.6%) ","144/30324 (0.5%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT5G37990","AT5G37990.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G37970.1); Has 880 Blast hits to 866 proteins in 114 species: Archae - 0; Bacteria - 48; Metazoa - 9; Fungi - 5; Plants - 716; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).","protein_coding",null,null," ","GO:0000096 sulfur amino acid metabolic process ","P ","1.94e-06 ","12/105 (11.4%) ","338/30324 (1.1%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 FMO GS-OX1 CYP79B3 MSRB5"," "]
["AT1G67360","AT1G67360.2","Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 125 Blast hits to 125 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0000097 sulfur amino acid biosynthetic process ","P ","6.28e-06 ","11/105 (10.5%) ","298/30324 (1.0%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IPMI2 CYP79B3 MSRB5"," "]
["AT4G29700","AT4G29700.1","Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2237 Blast hits to 2218 proteins in 571 species: Archae - 24; Bacteria - 916; Metazoa - 704; Fungi - 177; Plants - 108; Viruses - 6; Other Eukaryotes - 302 (source: NCBI BLink).","protein_coding",null,null," ","GO:0000041 transition metal ion transport ","P ","7.50e-06 ","10/105 (9.5%) ","233/30324 (0.8%) ","CYP81F4 AT5G40510 AT5G37990 AT1G77330 AGP22 AT5G23830 AT4G22212 GLP4 EDA21 AT4G15390"," "]
["AT1G55260","AT1G55260.1","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: nucleus, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034754 cellular hormone metabolic process ","P ","8.12e-06 ","9/105 (8.6%) ","173/30324 (0.6%) ","SOT18 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT5G44550","AT5G44550.1","Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT4G20390.1); Has 554 Blast hits to 554 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 554; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044281 small molecule metabolic process ","P ","9.30e-06 ","29/105 (27.6%) ","2614/30324 (8.6%) ","AT4G29270 CYP81F4 AT4G29700 SOT18 AT5G38020 NAS4 AT3G57010 PRP4 AT4G23670 AT1G55260 APR1 TT4 CYP83A1 FUM2 AT1G77330 MAM1 AGP22 SUR1 IMD1 IPMI2 FMO GS-OX1 UXS6 GSTU20 CB5-C PMEAMT CYP79B3 CYP81F3 ML3 MSRB5"," "]
["AT4G08400","AT4G08400.1","Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08410.1); Has 197190 Blast hits to 41529 proteins in 1665 species: Archae - 390; Bacteria - 28435; Metazoa - 74378; Fungi - 33240; Plants - 30216; Viruses - 5197; Other Eukaryotes - 25334 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901564 organonitrogen compound metabolic process ","P ","9.36e-06 ","22/105 (21.0%) ","1533/30324 (5.1%) ","CYP81F4 SOT18 NAS4 AT3G57010 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 CYP81F3 ML3 MSRB5"," "]
["AT3G54580","AT3G54580.1","Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT3G28550.1); Has 478331 Blast hits to 51256 proteins in 1906 species: Archae - 1077; Bacteria - 77248; Metazoa - 176231; Fungi - 77872; Plants - 71303; Viruses - 12471; Other Eukaryotes - 62129 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901566 organonitrogen compound biosynthetic process ","P ","1.09e-05 ","18/105 (17.1%) ","1019/30324 (3.4%) ","SOT18 NAS4 AT3G57010 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 NSP1 GSTU20 CB5-C PMEAMT CYP79B3 MSRB5"," "]
["AT2G27395","AT2G27395.1","pseudogene of cysteine protease-related","pseudogene",null,null," ","GO:1901607 alpha-amino acid biosynthetic process ","P ","1.14e-05 ","12/105 (11.4%) ","396/30324 (1.3%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 CYP79B3 MSRB5"," "]
["AT1G67750","AT1G67750.1","Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).","protein_coding",null,null," ","GO:0008652 cellular amino acid biosynthetic process ","P ","2.06e-05 ","13/105 (12.4%) ","509/30324 (1.7%) ","SOT18 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 PMEAMT CYP79B3 MSRB5"," "]
["AT4G03038","AT4G03038.1","Unknown gene","other_rna",null,null," ","GO:0016053 organic acid biosynthetic process ","P ","1.23e-04 ","17/105 (16.2%) ","1065/30324 (3.5%) ","SOT18 AT5G38020 NAS4 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 GSTU20 CB5-C PMEAMT CYP79B3 MSRB5"," "]
["AT4G22517","AT4G22517.1","Encodes a Protease inhibitor/seed storage/LTP family protein","protein_coding",null,null," ","GO:0046394 carboxylic acid biosynthetic process ","P ","1.23e-04 ","17/105 (16.2%) ","1065/30324 (3.5%) ","SOT18 AT5G38020 NAS4 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 MAM1 SUR1 IMD1 IPMI2 GSTU20 CB5-C PMEAMT CYP79B3 MSRB5"," "]
["AT3G20380","AT3G20380.1","TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G20370.1); Has 521 Blast hits to 488 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043436 oxoacid metabolic process ","P ","1.49e-04 ","22/105 (21.0%) ","1794/30324 (5.9%) ","CYP81F4 SOT18 AT5G38020 NAS4 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 FUM2 MAM1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 CYP81F3 ML3 MSRB5"," "]
["AT3G57010","AT3G57010.1","Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57020.1); Has 984 Blast hits to 970 proteins in 187 species: Archae - 1; Bacteria - 187; Metazoa - 221; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006082 organic acid metabolic process ","P ","1.50e-04 ","22/105 (21.0%) ","1795/30324 (5.9%) ","CYP81F4 SOT18 AT5G38020 NAS4 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 FUM2 MAM1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 CYP81F3 ML3 MSRB5"," "]
["AT5G23830","AT5G23830.1","MD-2-related lipid recognition domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172); BEST Arabidopsis thaliana protein match is: MD-2-related lipid recognition domain-containing protein (TAIR:AT5G23820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901135 carbohydrate derivative metabolic process ","P ","3.39e-04 ","16/105 (15.2%) ","1012/30324 (3.3%) ","CYP81F4 SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 NSP1 FMO GS-OX1 UXS6 CB5-C CYP79B3 CYP79F2 CYP81F3"," "]
["AT1G35250","AT1G35250.1","Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G35290.1); Has 1470 Blast hits to 1469 proteins in 508 species: Archae - 4; Bacteria - 1027; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).","protein_coding",null,null," ","GO:0065008 regulation of biological quality ","P ","6.10e-04 ","16/105 (15.2%) ","1058/30324 (3.5%) ","RGF9 AT4G29270 SOT18 AT3G57010 APR1 TT4 CYP83A1 AT1G77330 MAM1 AGP22 SUR1 IPMI2 GSTU20 CB5-C CYP79B3 GAPCP-1"," "]
["AT3G20370","AT3G20370.1","TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G20360.1); Has 795 Blast hits to 651 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 671; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).","protein_coding",null,null," ","GO:0019752 carboxylic acid metabolic process ","P ","2.28e-03 ","20/105 (19.0%) ","1780/30324 (5.9%) ","SOT18 AT5G38020 NAS4 PRP4 AT4G23670 AT1G55260 APR1 CYP83A1 FUM2 MAM1 SUR1 IMD1 IPMI2 FMO GS-OX1 GSTU20 CB5-C PMEAMT CYP79B3 ML3 MSRB5"," "]
["AT1G66270","AT1G66270.1","BGLU21; FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: cellular response to phosphate starvation, response to salt stress, cellular response to cold, cellular response to salt stress, response to osmotic stress; LOCATED IN: vacuole, membrane; EXPRESSED IN: root, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66280.1); Has 11188 Blast hits to 10882 proteins in 1457 species: Archae - 140; Bacteria - 7714; Metazoa - 698; Fungi - 202; Plants - 1441; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink).","protein_coding"," (BGLU21)"," (BGLU21)"," ","GO:0030001 metal ion transport ","P ","2.45e-03 ","11/105 (10.5%) ","542/30324 (1.8%) ","CYP81F4 AT5G40510 AT5G37990 AT1G77330 BAT5 AGP22 AT5G23830 AT4G22212 GLP4 EDA21 AT4G15390"," "]
["AT3G54600","AT3G54600.1","Class I glutamine amidotransferase-like superfamily protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G38860.2); Has 5251 Blast hits to 3173 proteins in 1205 species: Archae - 295; Bacteria - 4620; Metazoa - 9; Fungi - 11; Plants - 126; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).","protein_coding"," (DJ1F)"," (DJ1F)"," ","GO:1901137 carbohydrate derivative biosynthetic process ","P ","3.67e-03 ","12/105 (11.4%) ","682/30324 (2.2%) ","SOT18 APR1 CYP83A1 MAM1 BAT5 SUR1 IMD1 IPMI2 FMO GS-OX1 CB5-C CYP79B3 CYP79F2"," "]
["AT4G15920","AT4G15920.1","Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).","protein_coding"," (SWEET17)"," (AtSWEET17); (SWEET17)"," ","GO:0072330 monocarboxylic acid biosynthetic process ","P ","4.66e-03 ","11/105 (10.5%) ","580/30324 (1.9%) ","SOT18 AT5G38020 NAS4 APR1 CYP83A1 MAM1 SUR1 IPMI2 GSTU20 CB5-C CYP79B3"," "]
["AT1G58270","AT1G58270.1","ZW9 mRNA, complete cds","protein_coding"," (ZW9)"," (ZW9)"," ",{"$nulls":6}," "]
["AT4G15393","AT4G15393.2","a member of the cytochrome P450 gene family. molecular function unknown.","protein_coding","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 5 (CYP702A5)","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 5 (CYP702A5)"," "," ",{"$nulls":5}," "]
["AT3G26330","AT3G26330.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 37 (CYP71B37)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 37 (CYP71B37)"," ","Cellular Component",{"$nulls":5}," "]
["AT2G22330","AT2G22330.1","Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.","protein_coding","CYTOCHROME P450, FAMILY 79, SUBFAMILY B, POLYPEPTIDE 3 (CYP79B3)","CYTOCHROME P450, FAMILY 79, SUBFAMILY B, POLYPEPTIDE 3 (CYP79B3)"," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G16400","AT1G16400.1","Encodes cytochrome P450 CYP79F2.","protein_coding","CYTOCHROME P450, FAMILY 79, SUBFAMILY F, POLYPEPTIDE 2 (CYP79F2)","CYTOCHROME P450, FAMILY 79, SUBFAMILY F, POLYPEPTIDE 2 (CYP79F2)"," ","GO:0005576 extracellular region ","C ","6.13e-07 ","32/105 (30.5%) ","2804/30324 (9.2%) ","RGF9 RNS3 AT3G20380 AT4G29700 AT1G66100 AT5G22860 CYP71B37 SCPL9 CP1 BGLU21 AT3G09925 AT5G37990 AT3G20370 GLL22 AT1G58280 SDR4 AT5G23830 AT1G54010 AT4G22517 BGLU6 THI2.2 AT4G22212 GSTU20 AT5G44550 CYP81F3 GLP4 ML3 EDA21 AT1G23140 AT1G67750 FRO5 AT2G38390"," "]
["AT4G37400","AT4G37400.1","member of CYP81F","protein_coding","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 3 (CYP81F3)","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 3 (CYP81F3)"," ",{"$nulls":6}," "]
["AT4G37410","AT4G37410.1","member of CYP81F","protein_coding","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 4 (CYP81F4)","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 4 (CYP81F4)"," "," ",{"$nulls":5}," "]
["AT4G13770","AT4G13770.1","Encodes a cytochrome p450 enzyme that catalyzes the initial conversion of aldoximes to thiohydroximates in the synthesis of glucosinolates not derived from tryptophan.   Also has a role in auxin homeostasis.","protein_coding","CYTOCHROME P450, FAMILY 83, SUBFAMILY A, POLYPEPTIDE 1 (CYP83A1)","REDUCED EPIDERMAL FLUORESCENCE 2 (REF2);\"CYTOCHROME P450, FAMILY 83, SUBFAMILY A, POLYPEPTIDE 1\" (CYP83A1)"," ","Molecular Function",{"$nulls":5}," "]
["AT1G01750","AT1G01750.1","actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).","protein_coding","ACTIN DEPOLYMERIZING FACTOR 11 (ADF11)","ACTIN DEPOLYMERIZING FACTOR 11 (ADF11)"," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G38750","AT2G38750.1","Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis.","protein_coding","ANNEXIN 4 (ANNAT4)","ANNEXIN 4 (ANNAT4)"," ","GO:0003824 catalytic activity ","F ","2.16e-07 ","53/105 (50.5%) ","6784/30324 (22.4%) ","AT3G30280 AT4G29270 AT5G37970 RNS3 CYP81F4 AT4G29700 SOT18 AT5G38020 NAS4 AT5G22860 AT3G57010 AT1G77530 SCPL9 CP1 BGLU21 APR1 TT4 CYP83A1 AHP4 FUM2 AT5G37990 AT1G77330 MAM1 GLL22 PRR1 SUR1 SDR4 HXK3 IMD1 IPMI2 AT1G35250 FMO GS-OX1 UXS6 GSTU26 GSTU20 PMEAMT GSTF12 FLS1 CYP79F2 FAH1 MSRB4 AT1G14120 TLL1 CYP81F3 AT1G06090 GSTF14 AT4G15390 AT1G67750 GAPCP-1 AT1G14250 FRO5 AT2G38390 AT4G27560"," "]
["AT4G04610","AT4G04610.1","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.  This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","protein_coding","APS REDUCTASE 1 (APR1)","APS REDUCTASE 1 (APR1); (ATAPR1);PAPS REDUCTASE HOMOLOG 19 (PRH19); (APR)"," ","GO:0016491 oxidoreductase activity ","F ","4.95e-06 ","18/105 (17.1%) ","968/30324 (3.2%) ","CYP81F4 APR1 CYP83A1 AT1G77330 PRR1 SDR4 IMD1 FMO GS-OX1 FLS1 CYP79F2 FAH1 MSRB4 AT1G14120 CYP81F3 AT1G06090 GAPCP-1 FRO5 AT2G38390"," "]
["AT5G53250","AT5G53250.1","arabinogalactan protein 22 (AGP22); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1070 (InterPro:IPR009424); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 20 (TAIR:AT3G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","ARABINOGALACTAN PROTEIN 22 (AGP22)","ARABINOGALACTAN PROTEIN 22 (ATAGP22);ARABINOGALACTAN PROTEIN 22 (AGP22)"," ","GO:0004497 monooxygenase activity ","F ","8.94e-04 ","6/105 (5.7%) ","96/30324 (0.3%) ","CYP81F4 CYP83A1 FMO GS-OX1 CYP79F2 FAH1 CYP81F3"," "]
["AT1G60270","AT1G60270.1","beta glucosidase 6 (BGLU6); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 4 (TAIR:AT1G60090.1).","protein_coding","BETA GLUCOSIDASE 6 (BGLU6)","BETA GLUCOSIDASE 6 (BGLU6)"," ",{"$nulls":6}," "]
["AT4G12030","AT4G12030.2","Required for the biosynthesis of methionine-derived glucosinolates. Involved in the  transport of 2-keto acids between chloroplasts and the cytosol.","protein_coding","BILE ACID TRANSPORTER 5 (BAT5)","BILE ACID TRANSPORTER 5 (BAT5);BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5 (BASS5)"," ","  ",{"$nulls":5}," "]
["AT5G05270","AT5G05270.1","Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","CHALCONE ISOMERASE LIKE (CHIL)","CHALCONE ISOMERASE LIKE (CHIL); (ATCHIL)"," ",{"$nulls":6}," "]
["AT1G48598","AT1G48598.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF31 represents a conserved upstream opening reading frame relative to major ORF AT1G48600.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 31 (CPuORF31)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 31 (CPuORF31)"," ",{"$nulls":6}," "]
["AT2G46650","AT2G46650.1","member of Cytochromes b5","protein_coding","CYTOCHROME B5 ISOFORM C (CB5-C)"," (B5 #1); (CYTB5-C);CYTOCHROME B5 ISOFORM C (CB5-C);ARABIDOPSIS CYTOCHROME B5 ISOFORM C (ATCB5-C)"," ",{"$nulls":6}," "]
["AT2G30750","AT2G30750.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 12 (CYP71A12)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 12 (CYP71A12)"," ",{"$nulls":6}," "]
["AT1G74090","AT1G74090.1","encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.","protein_coding","DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (SOT18)","DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (SOT18);ARABIDOPSIS SULFOTRANSFERASE 5B (ATST5B);DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (ATSOT18)"," ",{"$nulls":6}," "]
["AT4G13235","AT4G13235.1","Encodes a defensin-like (DEFL) family protein.","protein_coding","EMBRYO SAC DEVELOPMENT ARREST 21 (EDA21)","EMBRYO SAC DEVELOPMENT ARREST 21 (EDA21)"," ",{"$nulls":6}," "]
["AT5G23990","AT5G23990.1","Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.","protein_coding","FERRIC REDUCTION OXIDASE 5 (FRO5)","FERRIC REDUCTION OXIDASE 5 (FRO5);FERRIC REDUCTION OXIDASE 5 (ATFRO5)"," ",{"$nulls":6}," "]
["AT4G36220","AT4G36220.1","encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","protein_coding","FERULIC ACID 5-HYDROXYLASE 1 (FAH1)"," (CYP84A1);FERULIC ACID 5-HYDROXYLASE 1 (FAH1)"," ",{"$nulls":6}," "]
["AT1G65860","AT1G65860.1","belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates","protein_coding","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1 (FMO GS-OX1)","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1 (FMO GS-OX1)"," ",{"$nulls":6}," "]
["AT5G08640","AT5G08640.1","Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR).","protein_coding","FLAVONOL SYNTHASE 1 (FLS1)"," (ATFLS1);FLAVONOL SYNTHASE 1 (FLS1);FLAVONOL SYNTHASE (FLS)"," ",{"$nulls":6}," "]
["AT5G50950","AT5G50950.1","Encodes a fumarase enzyme initially shown to be in the mitochondria through proteomic studies but later shown to be present in the cytosol using an RFP fluorescent protein tag. It appears to be important for the accumulation of fumarate from malate in leaves in the light, and helps to promote nitrogen assimilation under high nitrogen conditions. It does not appear to be necessary for lipid metabolism and seedling growth.","protein_coding","FUMARASE 2 (FUM2)","FUMARASE 2 (FUM2)"," ",{"$nulls":6}," "]
["AT1G54000","AT1G54000.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type cell wall, plant-type vacuole; EXPRESSED IN: stem, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 3190 Blast hits to 3160 proteins in 155 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 4; Plants - 2945; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).","protein_coding","GDSL LIPASE-LIKE PROTEIN 22 (GLL22)","GDSL LIPASE-LIKE PROTEIN 22 (GLL22)"," ",{"$nulls":6}," "]
["AT1G18970","AT1G18970.1","Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record).","protein_coding","GERMIN-LIKE PROTEIN 4 (GLP4)","GERMIN-LIKE PROTEIN 4 (GLP4)"," ",{"$nulls":6}," "]
["AT1G49860","AT1G49860.1","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE (CLASS PHI) 14 (GSTF14)","GLUTATHIONE S-TRANSFERASE (CLASS PHI) 14 (GSTF14);GLUTATHIONE S-TRANSFERASE (CLASS PHI) 14 (ATGSTF14)"," ",{"$nulls":6}," "]
["AT5G17220","AT5G17220.1","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts.","protein_coding","GLUTATHIONE S-TRANSFERASE PHI 12 (GSTF12)","ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12 (ATGSTF12);GLUTATHIONE S-TRANSFERASE 26 (GST26);TRANSPARENT TESTA 19 (TT19);GLUTATHIONE S-TRANSFERASE PHI 12 (GSTF12)"," ",{"$nulls":6}," "]
["AT1G78370","AT1G78370.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 20 (GSTU20)","GLUTATHIONE S-TRANSFERASE TAU 20 (ATGSTU20);GLUTATHIONE S-TRANSFERASE TAU 20 (GSTU20)"," ",{"$nulls":6}," "]
["AT1G17190","AT1G17190.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 26 (GSTU26)","GLUTATHIONE S-TRANSFERASE TAU 26 (GSTU26);GLUTATHIONE S-TRANSFERASE TAU 26 (ATGSTU26)"," ",{"$nulls":6}," "]
["AT1G79530","AT1G79530.1","Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","protein_coding","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1 (GAPCP-1)","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1 (GAPCP-1)"," ",{"$nulls":6}," "]
["AT1G47840","AT1G47840.1","Encodes a putative hexokinase.","protein_coding","HEXOKINASE 3 (HXK3)","HEXOKINASE 3 (HXK3)"," ",{"$nulls":6}," "]
["AT3G16360","AT3G16360.2","Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs).  AHPs function as redundant positive regulators of cytokinin signaling.  Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).","protein_coding","HPT PHOSPHOTRANSMITTER 4 (AHP4)","HPT PHOSPHOTRANSMITTER 4 (AHP4)"," ",{"$nulls":6}," "]
["AT5G14200","AT5G14200.1","The AtIMD1 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. Encodes methylthioalkylmalate dehydrogenase. Involved in glucosinolate biosynthesis, in methionine chain elongation.","protein_coding","ISOPROPYLMALATE DEHYDROGENASE 1 (IMD1)","ISOPROPYLMALATE DEHYDROGENASE 1 (IMD1);ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1 (ATIMD1)"," ",{"$nulls":6}," "]
["AT2G43100","AT2G43100.1","isopropylmalate isomerase 2 (IPMI2); FUNCTIONS IN: hydro-lyase activity, 3-isopropylmalate dehydratase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: plastid; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: 3-isopropylmalate dehydratase, small subunit-like (InterPro:IPR012305), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase-like core (InterPro:IPR015937); BEST Arabidopsis thaliana protein match is: Aconitase/3-isopropylmalate dehydratase protein (TAIR:AT2G43090.1); Has 8735 Blast hits to 8734 proteins in 2248 species: Archae - 359; Bacteria - 5628; Metazoa - 12; Fungi - 337; Plants - 71; Viruses - 0; Other Eukaryotes - 2328 (source: NCBI BLink).","protein_coding","ISOPROPYLMALATE ISOMERASE 2 (IPMI2)"," (ATLEUD1);ISOPROPYLMALATE ISOMERASE 2 (IPMI2)"," ",{"$nulls":6}," "]
["AT4G04810","AT4G04810.1","methionine sulfoxide reductase B4 (MSRB4); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B5 (TAIR:AT4G04830.1); Has 8356 Blast hits to 8353 proteins in 2248 species: Archae - 76; Bacteria - 4937; Metazoa - 263; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2736 (source: NCBI BLink).","protein_coding","METHIONINE SULFOXIDE REDUCTASE B4 (MSRB4)","METHIONINE SULFOXIDE REDUCTASE B4 (MSRB4);METHIONINE SULFOXIDE REDUCTASE B4 (ATMSRB4)"," ",{"$nulls":6}," "]
["AT4G04830","AT4G04830.1","methionine sulfoxide reductase B5 (MSRB5); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B4 (TAIR:AT4G04810.1); Has 8417 Blast hits to 8406 proteins in 2250 species: Archae - 78; Bacteria - 4939; Metazoa - 269; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2787 (source: NCBI BLink).","protein_coding","METHIONINE SULFOXIDE REDUCTASE B5 (MSRB5)","METHIONINE SULFOXIDE REDUCTASE B5 (MSRB5);METHIONINE SULFOXIDE REDUCTASE B5 (ATMSRB5)"," ",{"$nulls":6}," "]
["AT5G23010","AT5G23010.1","Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.","protein_coding","METHYLTHIOALKYLMALATE SYNTHASE 1 (MAM1)","2-ISOPROPYLMALATE SYNTHASE 3 (IMS3);METHYLTHIOALKYLMALATE SYNTHASE 1 (MAM1)"," ",{"$nulls":6}," "]
["AT2G01520","AT2G01520.1","Encodes a cis-cinnamic acid responsive gene that is a member of the major latex protein-like gene family and plays a role in promoting vegetative growth and delaying &#64258;owering.","protein_coding","MLP-LIKE PROTEIN 328 (MLP328)","(ZUSAMMEN-CA)-ENHANCED 1 (ZCE1);MLP-LIKE PROTEIN 328 (MLP328)"," ",{"$nulls":6}," "]
["AT1G56430","AT1G56430.1","Encodes a protein with nicotianamine synthase activity.","protein_coding","NICOTIANAMINE SYNTHASE 4 (NAS4)","ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4 (ATNAS4);NICOTIANAMINE SYNTHASE 4 (NAS4)"," ",{"$nulls":6}," "]
["AT3G16400","AT3G16400.1","Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","protein_coding","NITRILE SPECIFIER PROTEIN 1 (NSP1)","MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-470 (ATMLP-470);NITRILE SPECIFIER PROTEIN 1 (ATNSP1);NITRILE SPECIFIER PROTEIN 1 (NSP1)"," ",{"$nulls":6}," "]
["AT4G19030","AT4G19030.1","an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.","protein_coding","NOD26-LIKE MAJOR INTRINSIC PROTEIN 1 (NLM1)","NOD26-LIKE INTRINSIC PROTEIN 1;1 (NIP1;1);NOD26-LIKE MAJOR INTRINSIC PROTEIN 1 (NLM1); (AT-NLM1);NOD26-LIKE MAJOR INTRINSIC PROTEIN 1 (ATNLM1)"," ",{"$nulls":6}," "]
["AT1G48600","AT1G48600.2","Encodes a phosphoethanolamine N-methyltransferase that catalyses the last two methylation steps of the three sequential methylations of phosphoethanolamine (PEA) that are required for the synthesis of phosphocholine (PCho) in plants.","protein_coding","PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE (PMEAMT)"," (AtPMEAMT);PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE (PMEAMT)"," ",{"$nulls":6}," "]
["AT1G32100","AT1G32100.1","Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.","protein_coding","PINORESINOL REDUCTASE 1 (PRR1)","PSEUDO-RESPONSE REGULATOR 1 (PRR1);PINORESINOL REDUCTASE 1 (PRR1); (ATPRR1)"," ",{"$nulls":6}," "]
["AT4G38770","AT4G38770.1","Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall.  Transcripts are most abundant in aerial organs of the plant.","protein_coding","PROLINE-RICH PROTEIN 4 (PRP4)","ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4 (ATPRP4);PROLINE-RICH PROTEIN 4 (PRP4)"," ",{"$nulls":6}," "]
["AT3G05890","AT3G05890.1","RARE-COLD-INDUCIBLE 2B (RCI2B); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT3G05880.1); Has 1391 Blast hits to 1391 proteins in 471 species: Archae - 0; Bacteria - 653; Metazoa - 37; Fungi - 280; Plants - 382; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).","protein_coding","RARE-COLD-INDUCIBLE 2B (RCI2B)","RARE-COLD-INDUCIBLE 2B (RCI2B)"," ",{"$nulls":6}," "]
["AT1G26820","AT1G26820.1","Encodes ribonuclease RNS3.","protein_coding","RIBONUCLEASE 3 (RNS3)","RIBONUCLEASE 3 (RNS3)"," ",{"$nulls":6}," "]
["AT5G64770","AT5G64770.1","Encodes a root meristem growth factor (RGF).  Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation.  Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).","protein_coding","ROOT MERISTEM GROWTH FACTOR 9 (RGF9)","GOLVEN 2 (GLV2);CLE-LIKE 9 (CLEL 9);ROOT MERISTEM GROWTH FACTOR 9 (RGF9)"," ",{"$nulls":6}," "]
["AT2G23010","AT2G23010.2","serine carboxypeptidase-like 9 (SCPL9); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: sinapoylglucose 1 (TAIR:AT2G22990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","SERINE CARBOXYPEPTIDASE-LIKE 9 (SCPL9)","SERINE CARBOXYPEPTIDASE-LIKE 9 (SCPL9)"," ",{"$nulls":6}," "]
["AT3G29250","AT3G29250.1","NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 117310 Blast hits to 117106 proteins in 3562 species: Archae - 953; Bacteria - 77625; Metazoa - 4727; Fungi - 6379; Plants - 2526; Viruses - 6; Other Eukaryotes - 25094 (source: NCBI BLink).","protein_coding","SHORT-CHAIN DEHYDROGENASE REDUCTASE 4 (SDR4)"," (ATSDR4);SHORT-CHAIN DEHYDROGENASE REDUCTASE 4 (SDR4)"," ",{"$nulls":6}," "]
["AT2G20610","AT2G20610.1","Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis.","protein_coding","SUPERROOT 1 (SUR1)","SUPERROOT 1 (SUR1);HOOKLESS 3 (HLS3);ROOTY 1 (RTY1);ABERRANT LATERAL ROOT FORMATION 1 (ALF1);ROOTY (RTY)"," ",{"$nulls":6}," "]
["AT5G36910","AT5G36910.1","Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation.  Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.","protein_coding","THIONIN 2.2 (THI2.2)","THIONIN 2.2 (THI2.2)"," ",{"$nulls":6}," "]
["AT5G01500","AT5G01500.1","encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover","protein_coding","THYLAKOID ATP/ADP CARRIER (TAAC)","THYLAKOID ATP/ADP CARRIER (TAAC)"," ",{"$nulls":6}," "]
["AT5G25810","AT5G25810.1","encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis.","protein_coding","TINY (tny)","TINY (tny)"," ",{"$nulls":6}," "]
["AT1G43790","AT1G43790.1","tracheary element differentiation-related 6 (TED6); BEST Arabidopsis thaliana protein match is: tracheary element differentiation-related 7 (TAIR:AT5G48920.1); Has 61 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 (TED6)","TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 (TED6)"," ",{"$nulls":6}," "]
["AT5G48920","AT5G48920.1","tracheary element differentiation-related 7 (TED7); BEST Arabidopsis thaliana protein match is: tracheary element differentiation-related 6 (TAIR:AT1G43790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7 (TED7)","TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7 (TED7)"," ",{"$nulls":6}," "]
["AT5G13930","AT5G13930.1","Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.","protein_coding","TRANSPARENT TESTA 4 (TT4)","CHALCONE SYNTHASE (CHS);TRANSPARENT TESTA 4 (TT4); (ATCHS)"," ",{"$nulls":6}," "]
["AT1G45201","AT1G45201.1","Target of AtGRP7 regulation.","protein_coding","TRIACYLGLYCEROL LIPASE-LIKE 1 (TLL1)","ARABIDOPSIS THALIANA TRIACYLGLYCEROL LIPASE-LIKE 1 (ATTLL1);TRIACYLGLYCEROL LIPASE-LIKE 1 (TLL1)"," ",{"$nulls":6}," "]
["AT2G28760","AT2G28760.2","UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","UDP-XYL SYNTHASE 6 (UXS6)","UDP-XYL SYNTHASE 6 (UXS6)"," ",{"$nulls":6}," "]
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["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT4G24780","AT4G24780.1","Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT3G06868","AT3G06868.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G22700","AT5G22700.1","F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein (TAIR:AT5G22660.2); Has 2254 Blast hits to 2213 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010073 meristem maintenance ","P ","1.06e-05 ","10/88 (11.4%) ","289/30324 (1.0%) ","TAA1 AT5G56040 ZPR1 XTH9 LHW NIK1 AT4G29020 HSL1 AT3G07540 BAM2"," "]
["AT1G27210","AT1G27210.1","ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G59850.1); Has 516 Blast hits to 439 proteins in 115 species: Archae - 2; Bacteria - 40; Metazoa - 93; Fungi - 74; Plants - 195; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048507 meristem development ","P ","2.24e-04 ","11/88 (12.5%) ","508/30324 (1.7%) ","TAA1 AT5G56040 ZPR1 XTH9 LHW NIK1 PRE1 AT4G29020 HSL1 AT3G07540 BAM2"," "]
["AT2G32560","AT2G32560.1","F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G26850.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007166 cell surface receptor signaling pathway ","P ","2.44e-04 ","7/88 (8.0%) ","150/30324 (0.5%) ","AT5G56040 AT2G27060 WDR5a AT4G37250 HSL1 BAM2 AT4G34220"," "]
["AT4G35840","AT4G35840.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: NEP-interacting protein 2 (TAIR:AT2G17730.1); Has 8964 Blast hits to 8940 proteins in 268 species: Archae - 0; Bacteria - 2; Metazoa - 2132; Fungi - 649; Plants - 5031; Viruses - 28; Other Eukaryotes - 1122 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048509 regulation of meristem development ","P ","2.68e-04 ","8/88 (9.1%) ","225/30324 (0.7%) ","AT5G56040 ZPR1 XTH9 NIK1 PRE1 AT4G29020 HSL1 BAM2"," "]
["AT5G02890","AT5G02890.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G29250.1); Has 524 Blast hits to 524 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010075 regulation of meristem growth ","P ","6.16e-04 ","7/88 (8.0%) ","172/30324 (0.6%) ","AT5G56040 ZPR1 XTH9 NIK1 AT4G29020 HSL1 BAM2"," "]
["AT5G12950","AT5G12950.1","FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035266 meristem growth ","P ","8.36e-04 ","7/88 (8.0%) ","180/30324 (0.6%) ","AT5G56040 ZPR1 XTH9 NIK1 AT4G29020 HSL1 BAM2"," "]
["AT2G05765","AT2G05765.1","snoRNA; snoRNA","small_nucleolar_rna",null,null," ","GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway ","P ","1.92e-03 ","6/88 (6.8%) ","130/30324 (0.4%) ","AT5G56040 AT2G27060 AT4G37250 HSL1 BAM2 AT4G34220"," "]
["AT4G37250","AT4G37250.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007167 enzyme linked receptor protein signaling pathway ","P ","1.92e-03 ","6/88 (6.8%) ","130/30324 (0.4%) ","AT5G56040 AT2G27060 AT4G37250 HSL1 BAM2 AT4G34220"," "]
["AT5G56040","AT5G56040.2","Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 231331 Blast hits to 125911 proteins in 4380 species: Archae - 141; Bacteria - 23597; Metazoa - 71861; Fungi - 8804; Plants - 101197; Viruses - 340; Other Eukaryotes - 25391 (source: NCBI BLink).","protein_coding",null,null," ","GO:0065007 biological regulation ","P ","8.49e-03 ","33/88 (37.5%) ","5410/30324 (17.8%) ","TAA1 AT5G09460 AT5G56040 SVR7 RGF6 HB5 DRT100 ZPR1 AT2G44940 EMB25 bHLH071 GASA6 SOFL1 XTH9 AT1G68780 FP3 LHW AT2G27060 TCL2 NIK1 WDR5a BDG1 PRE1 EPF1 AT4G37250 TAS2 AT4G29020 HSL1 CIA2 AT3G07540 BAM2 AT4G34220 MURE"," "]
["AT4G34220","AT4G34220.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G15300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050789 regulation of biological process ","P ","9.09e-03 ","31/88 (35.2%) ","4911/30324 (16.2%) ","TAA1 AT5G09460 AT5G56040 SVR7 RGF6 HB5 DRT100 ZPR1 AT2G44940 EMB25 bHLH071 GASA6 XTH9 AT1G68780 LHW AT2G27060 TCL2 NIK1 WDR5a BDG1 PRE1 EPF1 AT4G37250 TAS2 AT4G29020 HSL1 CIA2 AT3G07540 BAM2 AT4G34220 MURE"," "]
["AT1G11850","AT1G11850.2","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 84259 Blast hits to 16502 proteins in 1194 species: Archae - 107; Bacteria - 41190; Metazoa - 21798; Fungi - 3523; Plants - 7569; Viruses - 886; Other Eukaryotes - 9186 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007389 pattern specification process ","P ","9.90e-03 ","8/88 (9.1%) ","366/30324 (1.2%) ","TAA1 ZPR1 LHW TCL2 EPF1 HSL1 AT3G07540 BAM2"," "]
["AT1G63080","AT1G63080.1","Transacting siRNA generating locus. Is targeted by TAS2-derived ta-siR2140 for cleavage.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G13190","AT3G13190.1","Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G55860.1); Has 29991 Blast hits to 19596 proteins in 1702 species: Archae - 469; Bacteria - 4655; Metazoa - 14295; Fungi - 2209; Plants - 1912; Viruses - 102; Other Eukaryotes - 6349 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT5G45950","AT5G45950.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G45960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT5G49170","AT5G49170.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G44940","AT2G44940.1","encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.","protein_coding",null,null," ","GO:0005576 extracellular region ","C ","7.92e-04 ","24/88 (27.3%) ","2804/30324 (9.2%) ","AT2G04570 AT5G63180 RGF6 XYL1 AT2G32560 EXPA10 AT5G45950 GASA6 XTH9 AT1G60590 AT1G55360 AT4G24780 AT5G11420 NIK1 AT1G10640 EXPA8 AT5G12950 AT1G09750 AT5G12960 EPF1 DGR2 AT5G01015 AT4G37250 CYP86A8"," "]
["AT1G75166","AT1G75166.1","snoRNA; snoRNA","small_nucleolar_rna",null,null," ",{"$nulls":6}," "]
["AT5G12960","AT5G12960.1","FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12950.1); Has 1236 Blast hits to 1216 proteins in 340 species: Archae - 6; Bacteria - 1067; Metazoa - 2; Fungi - 28; Plants - 90; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT5G63180","AT5G63180.1","Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G11420","AT5G11420.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G10640","AT1G10640.1","Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4327 Blast hits to 4306 proteins in 507 species: Archae - 6; Bacteria - 1323; Metazoa - 14; Fungi - 1302; Plants - 1545; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G60590","AT1G60590.1","Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1); Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6; Bacteria - 1298; Metazoa - 151; Fungi - 1295; Plants - 1596; Viruses - 3; Other Eukaryotes - 176 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G19870","AT2G19870.1","tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: methyltransferase activity, RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), RNA methyltransferase TrmH, group 3 (InterPro:IPR004441), RNA 2-O ribose methyltransferase, substrate binding (InterPro:IPR013123); Has 11661 Blast hits to 11576 proteins in 2636 species: Archae - 7; Bacteria - 7686; Metazoa - 749; Fungi - 216; Plants - 206; Viruses - 3; Other Eukaryotes - 2794 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G04570","AT2G04570.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G29020","AT4G29020.1","glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 92355 Blast hits to 23750 proteins in 1587 species: Archae - 185; Bacteria - 38167; Metazoa - 25977; Fungi - 4591; Plants - 7302; Viruses - 1155; Other Eukaryotes - 14978 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G14240","AT3G14240.1","Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 2 (TAIR:AT4G34980.1); Has 8878 Blast hits to 7637 proteins in 1214 species: Archae - 263; Bacteria - 5045; Metazoa - 160; Fungi - 690; Plants - 1978; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G26840","AT2G26840.2","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G09750","AT1G09750.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G01015","AT5G01015.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G28410","AT2G28410.1","unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G50685","AT3G50685.1","unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G13575","AT4G13575.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G07900","AT5G07900.1","Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G21150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G07540","AT3G07540.1","Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT5G48360.1); Has 4151 Blast hits to 3580 proteins in 346 species: Archae - 0; Bacteria - 185; Metazoa - 1758; Fungi - 365; Plants - 898; Viruses - 103; Other Eukaryotes - 842 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G09460","AT5G09460.1","sequence-specific DNA binding transcription factors;transcription regulators; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT5G64340.1); Has 178 Blast hits to 178 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 1; Plants - 159; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G59250","AT3G59250.1","F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G49150.1); Has 1668 Blast hits to 1623 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1668; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G68780","AT1G68780.1","RNI-like superfamily protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G25670.1); Has 76880 Blast hits to 27020 proteins in 1013 species: Archae - 25; Bacteria - 5064; Metazoa - 15853; Fungi - 790; Plants - 50474; Viruses - 2; Other Eukaryotes - 4672 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G27060","AT2G27060.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 117505 Blast hits to 68268 proteins in 2350 species: Archae - 92; Bacteria - 11270; Metazoa - 27205; Fungi - 2913; Plants - 66366; Viruses - 137; Other Eukaryotes - 9522 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G05600","AT3G05600.1","alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G55360","AT1G55360.1","Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G17180","AT4G17180.1","O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2802 Blast hits to 2733 proteins in 160 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 65; Plants - 2718; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G35180","AT1G35180.1","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35170.1); Has 191 Blast hits to 191 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 8; Plants - 76; Viruses - 3; Other Eukaryotes - 45 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G63680","AT1G63680.1","Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis.  Localized to plastids.  AtMurE is involved in chloroplast biogenesis.","protein_coding"," (MURE)","ALBINO OR PALE-GREEN 13 (APG13); (MURE);PIGMENT DEFECTIVE EMBRYO 316 (PDE316); (ATMURE)"," ",{"$nulls":6}," "]
["AT5G11040","AT5G11040.1","Encodes a tethering factor required for cell plate biogenesis.","protein_coding"," (TRS120)"," (TRS120); (AtTRS120)"," ",{"$nulls":6}," "]
["AT2G45970","AT2G45970.1","Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","protein_coding","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 8 (CYP86A8)","LACERATA (LCR);\"CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 8\" (CYP86A8)"," ",{"$nulls":6}," "]
["AT4G39510","AT4G39510.1","member of CYP96A","protein_coding","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 12 (CYP96A12)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 12 (CYP96A12)"," ",{"$nulls":6}," "]
["AT4G34250","AT4G34250.1","Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","protein_coding","3-KETOACYL-COA SYNTHASE 16 (KCS16)","3-KETOACYL-COA SYNTHASE 16 (KCS16)"," ",{"$nulls":6}," "]
["AT1G68560","AT1G68560.1","Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","protein_coding","ALPHA-XYLOSIDASE 1 (XYL1)","ALPHA-XYLOSIDASE 1 (ATXYL1);ALPHA-XYLOSIDASE 1 (XYL1);THERMOINHIBITION RESISTANT GERMINATION 1 (TRG1); (TRG1);ALTERED XYLOGLUCAN 3 (AXY3)"," ",{"$nulls":6}," "]
["AT3G49670","AT3G49670.1","Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function.  Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.","protein_coding","BARELY ANY MERISTEM 2 (BAM2)","BARELY ANY MERISTEM 2 (BAM2)"," ",{"$nulls":6}," "]
["AT5G46690","AT5G46690.1","beta HLH protein 71 (bHLH071); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","BETA HLH PROTEIN 71 (bHLH071)","BETA HLH PROTEIN 71 (bHLH071)"," ",{"$nulls":6}," "]
["AT1G64670","AT1G64670.1","Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.","protein_coding","BODYGUARD1 (BDG1)","9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1 (CED1);BODYGUARD1 (BDG1)"," ",{"$nulls":6}," "]
["AT5G57180","AT5G57180.2","Transcription regulator responsible for  specific upregulation of the translocon genes  atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.","protein_coding","CHLOROPLAST IMPORT APPARATUS 2 (CIA2)","CHLOROPLAST IMPORT APPARATUS 2 (CIA2)"," ",{"$nulls":6}," "]
["AT3G17998","AT3G17998.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF30 represents a conserved upstream opening reading frame relative to major ORF AT3G18000.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 30 (CPuORF30)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 30 (CPuORF30)"," ",{"$nulls":6}," "]
["AT5G09463","AT5G09463.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF41 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 41 (CPuORF41)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 41 (CPuORF41)"," ",{"$nulls":6}," "]
["AT5G09462","AT5G09462.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF42 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 42 (CPuORF42)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 42 (CPuORF42)"," ",{"$nulls":6}," "]
["AT5G09461","AT5G09461.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF43 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 43 (CPuORF43)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 43 (CPuORF43)"," ",{"$nulls":6}," "]
["AT2G27228","AT2G27228.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF6 represents a conserved upstream opening reading frame relative to major ORF AT2G27230.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 6 (CPuORF6)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 6 (CPuORF6)"," ",{"$nulls":6}," "]
["AT3G48720","AT3G48720.1","Encodes a hydroxycinnamoyl-CoA: v-hydroxy fatty acid transferase involved in cutin synthesis.  Mutants are almost devoid of ferulic acid.","protein_coding","DEFICIENT IN CUTIN FERULATE (DCF)","DEFICIENT IN CUTIN FERULATE (DCF)"," ",{"$nulls":6}," "]
["AT3G12610","AT3G12610.1","Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.","protein_coding","DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100)","DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100)"," ",{"$nulls":6}," "]
["AT5G25460","AT5G25460.1","Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","DUF642  L-GALL RESPONSIVE GENE 2 (DGR2)","DUF642  L-GALL RESPONSIVE GENE 2 (DGR2)"," ",{"$nulls":6}," "]
["AT4G24510","AT4G24510.1","Involved in C28 to C30 fatty acid elongation.","protein_coding","ECERIFERUM 2 (CER2)","ECERIFERUM 2 (CER2); (VC-2); (VC2)"," ",{"$nulls":6}," "]
["AT1G70070","AT1G70070.1","Allelic to ISE2(increased size  exclusion limit of plasmodesmata 2).  Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.","protein_coding","EMBRYO DEFECTIVE 25 (EMB25)","EMBRYO DEFECTIVE 25 (EMB25);INCREASED SIZE EXCLUSION LIMIT 2 (ISE2);PIGMENT DEFECTIVE 317 (PDE317)"," ",{"$nulls":6}," "]
["AT2G20875","AT2G20875.1","Encodes a secretory peptide EPF1 involved in stomatal development.  EPF1 is related to EPF2 which controls asymmetric cell divisions during stomatal devlopment.","protein_coding","EPIDERMAL PATTERNING FACTOR 1 (EPF1)","EPIDERMAL PATTERNING FACTOR 1 (EPF1)"," ",{"$nulls":6}," "]
["AT1G26770","AT1G26770.2","Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","protein_coding","EXPANSIN A10 (EXPA10)","EXPANSIN 10 (EXP10);EXPANSIN A10 (EXPA10);EXPANSIN A10 (ATEXPA10);ARABIDOPSIS THALIANA EXPANSIN 10 (AT-EXP10);ARABIDOPSIS THALIANA EXPANSIN 10 (ATEXP10);ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1 (ATHEXP ALPHA 1.1)"," ",{"$nulls":6}," "]
["AT2G40610","AT2G40610.1","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","protein_coding","EXPANSIN A8 (EXPA8)","EXPANSIN A8 (ATEXPA8); (EXP8);EXPANSIN A8 (EXPA8); (ATHEXP ALPHA 1.11); (ATEXP8)"," ",{"$nulls":6}," "]
["AT5G63530","AT5G63530.1","Farnesylated protein that binds metals.","protein_coding","FARNESYLATED PROTEIN 3 (FP3)","FARNESYLATED PROTEIN 3 (FP3);ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3 (ATFP3)"," ",{"$nulls":6}," "]
["AT5G22940","AT5G22940.1","Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.","protein_coding","FRA8 HOMOLOG (F8H)","FRA8 HOMOLOG (F8H)"," ",{"$nulls":6}," "]
["AT1G74670","AT1G74670.1","Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 4 (TAIR:AT5G15230.1); Has 479 Blast hits to 479 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","GA-STIMULATED ARABIDOPSIS 6 (GASA6)","GA-STIMULATED ARABIDOPSIS 6 (GASA6)"," ",{"$nulls":6}," "]
["AT1G28440","AT1G28440.1","HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink).","protein_coding","HAESA-LIKE 1 (HSL1)","HAESA-LIKE 1 (HSL1)"," ",{"$nulls":6}," "]
["AT1G16030","AT1G16030.1","heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink).","protein_coding","HEAT SHOCK PROTEIN 70B (Hsp70b)","HEAT SHOCK PROTEIN 70B (Hsp70b)"," ",{"$nulls":6}," "]
["AT2G28740","AT2G28740.1","histone 4","protein_coding","HISTONE H4 (HIS4)","HISTONE H4 (HIS4)"," ",{"$nulls":6}," "]
["AT5G65310","AT5G65310.1","Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.","protein_coding","HOMEOBOX PROTEIN 5 (HB5)","HOMEOBOX PROTEIN 5 (ATHB5);HOMEOBOX PROTEIN 5 (HB5); (ATHB-5)"," ",{"$nulls":6}," "]
["AT3G49660","AT3G49660.1","Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex.","protein_coding","HUMAN WDR5 (WD40 REPEAT) HOMOLOG A (WDR5a)"," (AtWDR5a);HUMAN WDR5 (WD40 REPEAT) HOMOLOG A (WDR5a)"," ",{"$nulls":6}," "]
["AT2G45450","AT2G45450.1","ZPR1, a small leucine zipper-containing protein that interacts with REV HD-ZIPIII and is involved in the establishment of leaf polarity.","protein_coding","LITTLE ZIPPER 1 (ZPR1)","LITTLE ZIPPER 1 (ZPR1)"," ",{"$nulls":6}," "]
["AT2G27230","AT2G27230.1","Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins.  It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.","protein_coding","LONESOME HIGHWAY (LHW)","LONESOME HIGHWAY (LHW)"," ",{"$nulls":6}," "]
["AT4G13494","AT4G13494.1","Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UUGAGAGCAACAAGACAUAAU","miRNA","MICRORNA863A (MIR863A)","MICRORNA863A (MIR863A)"," ",{"$nulls":6}," "]
["AT5G16000","AT5G16000.1","NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus  It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP).","protein_coding","NSP-INTERACTING KINASE 1 (NIK1)","NSP-INTERACTING KINASE 1 (NIK1)"," ",{"$nulls":6}," "]
["AT5G39860","AT5G39860.1","Encodes PRE1 (PACLOBUTRAZOL RESISTANCE1).  PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation.  BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.","protein_coding","PACLOBUTRAZOL  RESISTANCE1 (PRE1)","PACLOBUTRAZOL  RESISTANCE1 (PRE1);BASIC HELIX-LOOP-HELIX PROTEIN 136 (BHLH136);BANQUO 1 (BNQ1)"," ",{"$nulls":6}," "]
["AT2G38940","AT2G38940.1","Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). Expression is upregulated in the shoot of cax1/cax3 mutant.","protein_coding","PHOSPHATE TRANSPORTER 1;4 (PHT1;4)","ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2 (ATPT2);PHOSPHATE TRANSPORTER 1;4 (PHT1;4)"," ",{"$nulls":6}," "]
["AT3G16380","AT3G16380.1","polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins.","protein_coding","POLY(A) BINDING PROTEIN 6 (PAB6)","POLY(A) BINDING PROTEIN 6 (PAB6)"," ",{"$nulls":6}," "]
["AT4G16515","AT4G16515.1","Encodes a root meristem growth factor (RGF).  Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation.  Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).","protein_coding","ROOT MERISTEM GROWTH FACTOR 6 (RGF6)","GOLVEN 1 (GLV1);CLE-LIKE 6 (CLEL 6);ROOT MERISTEM GROWTH FACTOR 6 (RGF6)"," ",{"$nulls":6}," "]
["AT5G18060","AT5G18060.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G18050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","SMALL AUXIN UP RNA 23 (SAUR23)","SMALL AUXIN UP RNA 23 (SAUR23)"," ",{"$nulls":6}," "]
["AT1G26210","AT1G26210.1","AtSOFL1 acts redundantly with AtSOFL2 as positive regulator of cytokinin levels.","protein_coding","SOB FIVE-LIKE 1 (SOFL1)","SOB FIVE-LIKE 1 (SOFL1);SOB FIVE-LIKE 1 (ATSOFL1)"," ",{"$nulls":6}," "]
["AT4G16390","AT4G16390.1","Encodes a pentatricopeptide repeat protein, SVR7 (SUPPRESSOR OF VARIEGATION7), required for FtsH-mediated chloroplast biogenesis.","protein_coding","SUPPRESSOR OF VARIEGATION 7 (SVR7)","SUPPRESSOR OF VARIEGATION 7 (SVR7)"," ",{"$nulls":6}," "]
["AT2G39681","AT2G39681.1","Trans-acting siRNA primary transcript. RDR6-dependent trans-acting siRNA-generating locus. Regulated by miR173.  Produces at least four distinct ta-siRNAs directed against PPR genes.","other_rna","TRANS-ACTING SIRNA2 (TAS2)","TRANS-ACTING SIRNA2 (TAS2)"," ",{"$nulls":6}," "]
["AT2G30424","AT2G30424.1","In a tandem repeat with AT2g30432 (TCL1) and AT2g30420 (ETC2), it encodes a single-repeat R3 MYB transcription factor that is involved in the negative regulation of trichome formation.","protein_coding","TRICHOMELESS 2 (TCL2)","TRICHOMELESS 2 (TCL2)"," ",{"$nulls":6}," "]
["AT1G70560","AT1G70560.1","TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.","protein_coding","TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (TAA1)","CYTOKININ INDUCED ROOT CURLING 1 (CKRC1);TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (TAA1);WEAK ETHYLENE INSENSITIVE 8 (WEI8);SHADE AVOIDANCE 3 (SAV3)"," ",{"$nulls":6}," "]
["AT3G18000","AT3G18000.1","Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.","protein_coding","XIPOTL 1 (XPL1)","N-METHYLTRANSFERASE 1 (NMT1); (PEAMT);XIPOTL 1 (XPL1)"," ",{"$nulls":6}," "]
["AT4G03210","AT4G03210.1","encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.","protein_coding","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 (XTH9)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 (XTH9)"," ",{"$nulls":6}," "]
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{"sheet":"25","index":25,"n_rows":164,"n_cols":11,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",null," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","No GO Term enrichment",null,null,"ATTED2 Co-expression network"]
["AT5G63000","AT5G63000.1","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G62910","AT1G62910.1","Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63150.1); Has 124657 Blast hits to 15540 proteins in 305 species: Archae - 10; Bacteria - 122; Metazoa - 2303; Fungi - 2464; Plants - 114740; Viruses - 0; Other Eukaryotes - 5018 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G63150","AT1G63150.1","Transacting siRNA generating locus.","protein_coding",null,null," "]
["AT2G38980","AT2G38980.1","pseudogene, similar to fiber protein Fb12,  blastp match of 53% identity and 1.2e-13 P-value to GP|25992543|gb|AAN77151.1||AF531371 fiber protein Fb12 {Gossypium barbadense}","pseudogene",null,null," "]
["AT4G22790","AT4G22790.1","MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 7578 Blast hits to 7441 proteins in 1706 species: Archae - 65; Bacteria - 4933; Metazoa - 143; Fungi - 328; Plants - 1275; Viruses - 0; Other Eukaryotes - 834 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G50690","AT3G50690.1","Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: U2 small nuclear ribonucleoprotein A (TAIR:AT1G09760.1); Has 87837 Blast hits to 40058 proteins in 1793 species: Archae - 912; Bacteria - 10630; Metazoa - 29004; Fungi - 15487; Plants - 5654; Viruses - 1023; Other Eukaryotes - 25127 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G60545","AT1G60545.1","Potential natural antisense gene, locus overlaps with AT1G60540","other_rna",null,null," "]
["AT5G14940","AT5G14940.1","Major facilitator superfamily protein; FUNCTIONS IN: amino acid transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01350.1); Has 5224 Blast hits to 5039 proteins in 856 species: Archae - 0; Bacteria - 1785; Metazoa - 536; Fungi - 394; Plants - 2164; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G02005","AT4G02005.1","Unknown gene","other_rna",null,null," "]
["AT4G39361","AT4G39361.1","snoRNA; snoRNA","small_nucleolar_rna",null,null," "]
["AT5G52550","AT5G52550.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25670.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G18255","AT5G18255.1","Potential natural antisense gene, locus overlaps with AT5G18260","other_rna",null,null," "]
["AT1G05860","AT1G05860.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 101 Blast hits to 100 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G28060","AT1G28060.1","Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G27340","AT2G27340.2","N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT3G58130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G01570","AT4G01570.1","Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 59349 Blast hits to 13105 proteins in 268 species: Archae - 8; Bacteria - 24; Metazoa - 241; Fungi - 448; Plants - 57026; Viruses - 0; Other Eukaryotes - 1602 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G41250","AT2G41250.1","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G34560","AT4G34560.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G07215","AT3G07215.1","Unknown gene","other_rna",null,null," "]
["AT5G35753","AT5G35753.1","CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G15820","AT5G15820.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1); Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0; Bacteria - 6; Metazoa - 2461; Fungi - 626; Plants - 4186; Viruses - 29; Other Eukaryotes - 1112 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G67570","AT1G67570.1","Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G60050","AT5G60050.1","BTB/POZ domain-containing protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G04880","AT5G04880.1","pseudogene of ABC transporter family protein","pseudogene",null,null," "]
["AT1G22040","AT1G22040.1","Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G25707","AT4G25707.1","This gene encodes a small protein and has either evidence of transcription or purifying selection.","protein_coding",null,null," "]
["AT4G37130","AT4G37130.1","hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G14330","AT3G14330.1","Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G46790.1); Has 35559 Blast hits to 14091 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 58; Fungi - 108; Plants - 34937; Viruses - 0; Other Eukaryotes - 450 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G26030","AT2G26030.1","F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G44950.1); Has 2057 Blast hits to 2017 proteins in 27 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2053; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G22890","AT5G22890.1","C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G34370.1); Has 32454 Blast hits to 15503 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 30756; Fungi - 38; Plants - 696; Viruses - 0; Other Eukaryotes - 964 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G01210","AT5G01210.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G44660","AT5G44660.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits to 462 proteins in 141 species: Archae - 2; Bacteria - 370; Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other Eukaryotes - 239 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G09670","AT5G09670.2","loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3115 Blast hits to 1776 proteins in 152 species: Archae - 0; Bacteria - 24; Metazoa - 1222; Fungi - 31; Plants - 508; Viruses - 3; Other Eukaryotes - 1327 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G06000","AT2G06000.1","Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 50374 Blast hits to 14280 proteins in 277 species: Archae - 4; Bacteria - 40; Metazoa - 520; Fungi - 618; Plants - 47817; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G27590","AT1G27590.1","CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G25590","AT2G25590.1","Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like RNA-binding protein (TAIR:AT4G32440.3); Has 129 Blast hits to 122 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G63330","AT1G63330.1","Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G62590.1); Has 64592 Blast hits to 15428 proteins in 305 species: Archae - 4; Bacteria - 72; Metazoa - 1099; Fungi - 1181; Plants - 59820; Viruses - 0; Other Eukaryotes - 2416 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G03995","AT5G03995.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G19250","AT2G19250.1","pseudogene, similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco), similar to SP|O24133 Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana tabacum}; blastp match of 78% identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco) {Nicotiana tabacum}","pseudogene",null,null," "]
["AT1G62590","AT1G62590.1","pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63330.1); Has 66706 Blast hits to 15368 proteins in 309 species: Archae - 3; Bacteria - 71; Metazoa - 1158; Fungi - 1331; Plants - 61521; Viruses - 0; Other Eukaryotes - 2622 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G19070","AT4G19070.1","Putative membrane lipoprotein; Has 124 Blast hits to 75 proteins in 28 species: Archae - 2; Bacteria - 7; Metazoa - 8; Fungi - 0; Plants - 50; Viruses - 47; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G27921","AT1G27921.1","Potential natural antisense gene, locus overlaps with AT1G27920","other_rna",null,null," "]
["AT1G64270","AT1G64270.1","transposable element gene; Mutator-like transposase family, has a 1.0e-06 P-value blast match to GB:AAA21566 mudrA of transposon=\"MuDR\" (MuDr-element) (Zea mays)","transposable_element_gene",null,null," "]
["AT1G19620","AT1G19620.1","unknown protein; Has 44 Blast hits to 24 proteins in 12 species: Archae - 0; Bacteria - 8; Metazoa - 22; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G17780","AT5G17780.2","alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G17720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G29357","AT1G29357.1","Potential natural antisense gene, locus overlaps with AT1G29355","other_rna",null,null," "]
["AT2G35750","AT2G35750.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G45340","AT2G45340.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 128804 Blast hits to 78819 proteins in 2294 species: Archae - 81; Bacteria - 6216; Metazoa - 31402; Fungi - 3884; Plants - 74763; Viruses - 171; Other Eukaryotes - 12287 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G51530","AT3G51530.1","F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 1900 Blast hits to 1872 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1900; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G32440","AT4G32440.2","Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G29230","AT3G29230.1","Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 41738 Blast hits to 14344 proteins in 280 species: Archae - 0; Bacteria - 4; Metazoa - 166; Fungi - 161; Plants - 40664; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G26622","AT5G26622.1","Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT3G44070.1); Has 72 Blast hits to 70 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G57720","AT3G57720.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57730.1); Has 54825 Blast hits to 54362 proteins in 2398 species: Archae - 40; Bacteria - 6527; Metazoa - 13539; Fungi - 2973; Plants - 25185; Viruses - 100; Other Eukaryotes - 6461 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G57170","AT3G57170.1","N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G33500","AT2G33500.1","B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3455 Blast hits to 2237 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 3332; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G15690","AT1G15690.1","Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.","protein_coding"," (AVP1)"," (AVP1);ARABIDOPSIS THALIANA V-PPASE 3 (ATAVP3); (ATAVP1); (AtVHP1;1);FUGU 5 (FUGU5); (AVP-3)"," "]
["AT5G64570","AT5G64570.1","Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","protein_coding","BETA-D-XYLOSIDASE 4 (XYL4)","BETA-D-XYLOSIDASE 4 (XYL4);ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4 (ATBXL4)"," "]
["AT5G52552","AT5G52552.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF14 represents a conserved upstream opening reading frame relative to major ORF AT5G52550.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 14 (CPuORF14)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 14 (CPuORF14)"," "]
["AT5G09672","AT5G09672.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF21 represents a conserved upstream opening reading frame relative to major ORF AT5G09670.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 21 (CPuORF21)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 21 (CPuORF21)"," "]
["AT1G25472","AT1G25472.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF54 represents a conserved upstream opening reading frame relative to major ORF AT1G25470.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 54 (CPuORF54)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 54 (CPuORF54)"," "]
["AT1G25470","AT1G25470.1","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","protein_coding","CYTOKININ RESPONSE FACTOR 12 (CRF12)","CYTOKININ RESPONSE FACTOR 12 (CRF12)"," "]
["AT4G27950","AT4G27950.1","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","CYTOKININ RESPONSE FACTOR 4 (CRF4)","CYTOKININ RESPONSE FACTOR 4 (CRF4)"," "]
["AT1G03300","AT1G03300.1","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","protein_coding","DOMAIN OF UNKNOWN FUNCTION 724 1 (ATDUF1)","DOMAIN OF UNKNOWN FUNCTION 724 1 (ATDUF1);DOMAIN OF UNKNOWN FUNCTION 724 1 (DUF1)"," "]
["AT1G14920","AT1G14920.1","Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.","protein_coding","GIBBERELLIC ACID INSENSITIVE (GAI)","GIBBERELLIC ACID INSENSITIVE (GAI);RESTORATION ON GROWTH ON AMMONIA 2 (RGA2)"," "]
["AT4G03190","AT4G03190.1","Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.","protein_coding","GRR1-LIKE PROTEIN 1 (GRH1)","GRR1-LIKE PROTEIN 1 (GRH1); (ATGRH1);A. THALIANA GERMIN-LIKE PROTEIN 1 (ATGER1);AUXIN SIGNALING F BOX PROTEIN 1 (AFB1)"," "]
["AT3G60630","AT3G60630.1","Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","protein_coding","HAIRY MERISTEM 2 (HAM2)","HAIRY MERISTEM 2 (HAM2);LOST MERISTEMS 2 (LOM2);ARABIDOPSIS THALIANA HAIRY MERISTEM 2 (ATHAM2)"," "]
["AT5G62940","AT5G62940.1","HCA2 induces the formation of interfascicular  cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.","protein_coding","HIGH CAMBIAL ACTIVITY2 (HCA2)","DNA BINDING WITH ONE FINGER 5.6 (DOF5.6);HIGH CAMBIAL ACTIVITY2 (HCA2)"," "]
["AT5G15580","AT5G15580.1","Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction.  The LNG1 homologue LNG2 (At3g02170) has similar function.","protein_coding","LONGIFOLIA1 (LNG1)","TON1 RECRUITING MOTIF 2 (TRM2);LONGIFOLIA1 (LNG1)"," "]
["AT3G53700","AT3G53700.1","maternal effect embryo arrest 40 (MEE40); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 58723 Blast hits to 15213 proteins in 321 species: Archae - 6; Bacteria - 72; Metazoa - 992; Fungi - 1450; Plants - 53933; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).","protein_coding","MATERNAL EFFECT EMBRYO ARREST 40 (MEE40)","MATERNAL EFFECT EMBRYO ARREST 40 (MEE40)"," "]
["AT4G18120","AT4G18120.1","A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization.","protein_coding","MEI2-LIKE 3 (ML3)","MEI2-LIKE 3 (AML3);MEI2-LIKE 3 (ML3)"," "]
["AT2G26700","AT2G26700.1","Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.","protein_coding","PINOID2 (PID2)","PINOID2 (PID2)"," "]
["AT2G46790","AT2G46790.1","Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY.","protein_coding","PSEUDO-RESPONSE REGULATOR 9 (PRR9)","ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9 (APRR9);TOC1-LIKE PROTEIN 1 (TL1);PSEUDO-RESPONSE REGULATOR 9 (PRR9)"," "]
["AT5G37260","AT5G37260.1","Encodes a MYB family transcription factor Circadian 1 (CIR1).  Involved in circadian regulation in Arabidopsis.","protein_coding","REVEILLE 2 (RVE2)","REVEILLE 2 (RVE2);CIRCADIAN 1 (CIR1)"," "]
["AT1G02840","AT1G02840.1","SR34/SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","protein_coding","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (SR34)"," (SR1); (ATSRP34);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (At-SR34);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (SR34); (SRP34)"," "]
["AT4G02430","AT4G02430.2","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","protein_coding","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34B (SR34b)","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34B (At-SR34b);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34B (SR34b)"," "]
["AT2G24820","AT2G24820.1","translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink).","protein_coding","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55-II (TIC55-II)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55 (AtTic55);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55-II (TIC55-II);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55 (Tic55)"," "]
["AT3G56860","AT3G56860.3","encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.","protein_coding","UBP1-ASSOCIATED PROTEIN 2A (UBA2A)","UBP1-ASSOCIATED PROTEIN 2A (UBA2A)"," "]
["AT1G28520","AT1G28520.1","vascular plant one zinc finger protein (VOZ1); BEST Arabidopsis thaliana protein match is: vascular plant one zinc finger protein 2 (TAIR:AT2G42400.1); Has 77 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","VASCULAR PLANT ONE ZINC FINGER PROTEIN (VOZ1)","VASCULAR PLANT ONE ZINC FINGER PROTEIN (ATVOZ1);VASCULAR PLANT ONE ZINC FINGER PROTEIN (VOZ1)"," "]
["AT3G29100","AT3G29100.1","Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13.  This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated.","protein_coding","VESICLE TRANSPORT V-SNARE 13 (VTI13)"," (ATVTI13);VESICLE TRANSPORT V-SNARE 13 (VTI13)"," "]
["AT5G65683","AT5G65683.1","Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT4G37890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","WAV3 HOMOLOG 2 (WAVH2)","WAV3 HOMOLOG 2 (WAVH2)"," "]
["AT4G28720","AT4G28720.1","Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype.","protein_coding","YUCCA 8 (YUC8)","YUCCA 8 (YUC8)"," "]
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{"sheet":"26","index":26,"n_rows":164,"n_cols":11,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",null," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","No GO Term enrichment",null,null,"ATTED2 Co-expression network"]
["AT5G24890","AT5G24890.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G43950","AT5G43950.1","Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT1G04090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G50450","AT5G50450.1","HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT1G67340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G65660","AT5G65660.1","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G03150","AT4G03150.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G34570","AT1G34570.1","Essential protein Yae1, N-terminal; CONTAINS InterPro DOMAIN/s: Essential protein Yae1, N-terminal (InterPro:IPR019191); BEST Arabidopsis thaliana protein match is: Essential protein Yae1, N-terminal (TAIR:AT3G15750.1); Has 136 Blast hits to 136 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 17; Plants - 55; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G75460","AT1G75460.1","ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G62900","AT5G62900.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G21445","AT4G21445.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G29905","AT4G29905.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G13975","AT2G13975.1","transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43920.1); similar to GRF zinc finger containing protein [Brassica oleracea] (GB:ABD64950.1)","transposable_element_gene",null,null," "]
["AT5G57887","AT5G57887.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G15570","AT3G15570.1","Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G52770.1); Has 825 Blast hits to 823 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G33960","AT4G33960.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G25210","AT5G25210.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G22210","AT3G22210.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G26220","AT1G26220.1","Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 1297 Blast hits to 1297 proteins in 410 species: Archae - 14; Bacteria - 927; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G18773","AT3G18773.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 8714 Blast hits to 8693 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 2221; Fungi - 538; Plants - 4826; Viruses - 53; Other Eukaryotes - 1076 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G60400","AT5G60400.3","unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G47160","AT3G47160.2","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1).","protein_coding",null,null," "]
["AT2G28605","AT2G28605.1","Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side).","protein_coding",null,null," "]
["AT5G62360","AT5G62360.1","Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G21185","AT2G21185.1","unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G33055","AT1G33055.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G10405","AT3G10405.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G15450","AT3G15450.1","Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT4G27450.1); Has 430 Blast hits to 430 proteins in 86 species: Archae - 0; Bacteria - 40; Metazoa - 2; Fungi - 2; Plants - 364; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G06145","AT3G06145.1","unknown protein; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G59940","AT3G59940.1","Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G44130.1); Has 2977 Blast hits to 2510 proteins in 188 species: Archae - 4; Bacteria - 251; Metazoa - 1720; Fungi - 24; Plants - 858; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G27385","AT2G27385.1","Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G22430.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "]
["AT1G75960","AT1G75960.1","AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 5 (TAIR:AT5G16370.1); Has 76139 Blast hits to 69900 proteins in 3519 species: Archae - 1138; Bacteria - 49873; Metazoa - 3177; Fungi - 3318; Plants - 2164; Viruses - 1; Other Eukaryotes - 16468 (source: NCBI BLink).","protein_coding",null,null," "]
["AT5G44250","AT5G44250.1","Protein of unknown function DUF829, transmembrane 53; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT2G15695.1); Has 221 Blast hits to 219 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 97; Fungi - 6; Plants - 101; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G09580","AT3G09580.1","FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G30975","AT4G30975.1","Unknown gene","other_rna",null,null," "]
["AT3G50840","AT3G50840.1","Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G66560.1); Has 881 Blast hits to 860 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 3; Plants - 864; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," "]
["AT3G15115","AT3G15115.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," "]
["AT4G01330","AT4G01330.2","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2).","protein_coding",null,null," "]
["AT5G47550","AT5G47550.1","Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G16500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G45210","AT2G45210.1","SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT3G60690.1); Has 1221 Blast hits to 1213 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1220; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," "]
["AT2G22800","AT2G22800.1","Encodes homeobox protein HAT9.","protein_coding"," (HAT9)"," (HAT9)"," "]
["AT5G36120","AT5G36120.1","cofactor assembly, complex C (B6F) (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","COFACTOR ASSEMBLY, COMPLEX C (B6F) (CCB3)","COFACTOR ASSEMBLY, COMPLEX C (B6F) (CCB3); (atylmg3); (YLMG3)"," "]
["AT5G04770","AT5G04770.1","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.","protein_coding","CATIONIC AMINO ACID TRANSPORTER 6 (CAT6)","ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6 (ATCAT6);CATIONIC AMINO ACID TRANSPORTER 6 (CAT6)"," "]
["AT3G26740","AT3G26740.1","transcripts are  differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","protein_coding","CCR-LIKE (CCL)","CCR-LIKE (CCL)"," "]
["AT5G43860","AT5G43860.1","Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.","protein_coding","CHLOROPHYLLASE 2 (CLH2)","ARABIDOPSIS THALIANA CHLOROPHYLLASE 2 (ATCLH2);CHLOROPHYLLASE 2 (CLH2)"," "]
["AT5G57660","AT5G57660.1","CONSTANS-like 5 (COL5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","CONSTANS-LIKE 5 (COL5)","CONSTANS-LIKE 5 (COL5); (ATCOL5)"," "]
["AT5G67190","AT5G67190.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)"," "]
["AT2G30420","AT2G30420.1","In a tandem repeat with AT2G30424 and AT2G30432","protein_coding","ENHANCER OF TRY AND CPC 2 (ETC2)","ENHANCER OF TRY AND CPC 2 (ETC2)"," "]
["AT2G45160","AT2G45160.1","Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","protein_coding","HAIRY MERISTEM 1 (HAM1)","ARABIDOPSIS THALIANA HAIRY MERISTEM 1 (ATHAM1);HAIRY MERISTEM 1 (HAM1);LOST MERISTEMS 1 (LOM1)"," "]
["AT3G51910","AT3G51910.1","member of Heat Stress Transcription Factor (Hsf) family","protein_coding","HEAT SHOCK TRANSCRIPTION FACTOR  A7A (HSFA7A)","HEAT SHOCK TRANSCRIPTION FACTOR  A7A (HSFA7A);ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR  A7A (AT-HSFA7A)"," "]
["AT4G37470","AT4G37470.1","HTL belonging to the alpha/beta fold hydrolase superfamily. Mutant and over-expression studies indicates its involvement in seedling de-etiolation process.","protein_coding","KARRIKIN INSENSITIVE 2 (KAI2)","KARRIKIN INSENSITIVE 2 (KAI2)"," "]
["AT2G30790","AT2G30790.1","Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.","protein_coding","PHOTOSYSTEM II SUBUNIT P-2 (PSBP-2)","PHOTOSYSTEM II SUBUNIT P-2 (PSBP-2)"," "]
["AT2G01918","AT2G01918.1","Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.","protein_coding","PSBQ-LIKE 3 (PQL3)","PSBQ-LIKE 3 (PQL3)"," "]
["AT4G01026","AT4G01026.1","Encodes a member of the PYR (pyrabactin resistance  )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members.  PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.  PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2.","protein_coding","PYR1-LIKE 7 (PYL7)","REGULATORY COMPONENTS OF ABA RECEPTOR 2 (RCAR2);PYR1-LIKE 7 (PYL7)"," "]
["AT4G39090","AT4G39090.1","Similar to cysteine proteinases, induced by desiccation but not abscisic acid.  Required for RRS1-R mediated resistance against Ralstonia solanacearum.  Interacts with the R. solanacearum type III effector PopP2.  RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R?mediated resistance response.","protein_coding","RESPONSIVE TO DEHYDRATION 19 (RD19)","RESPONSIVE TO DEHYDRATION 19A (RD19A);RESPONSIVE TO DEHYDRATION 19 (RD19)"," "]
["AT2G17450","AT2G17450.1","Encodes a putative RING-H2 finger protein RHA3a.","protein_coding","RING-H2 FINGER A3A (RHA3A)","RING-H2 FINGER A3A (RHA3A)"," "]
["AT1G04240","AT1G04240.1","SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro.","protein_coding","SHORT HYPOCOTYL 2 (SHY2)","INDOLE-3-ACETIC ACID INDUCIBLE 3 (IAA3);SHORT HYPOCOTYL 2 (SHY2)"," "]
["AT1G22370","AT1G22370.2","UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","UDP-GLUCOSYL TRANSFERASE 85A5 (UGT85A5)","UDP-GLUCOSYL TRANSFERASE 85A5 (UGT85A5);UDP-GLUCOSYL TRANSFERASE 85A5 (AtUGT85A5)"," "]
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{"sheet":"27","index":27,"n_rows":164,"n_cols":15,"rows_kept":164,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT2G38740","AT2G38740.1","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G56500.1); Has 17978 Blast hits to 17978 proteins in 2581 species: Archae - 265; Bacteria - 14433; Metazoa - 167; Fungi - 429; Plants - 387; Viruses - 3; Other Eukaryotes - 2294 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT3G04410","AT3G04410.1","NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 48 Blast hits to 26 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT4G08593","AT4G08593.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45095.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010167 response to nitrate ","P ","4.92e-13 ","17/157 (10.8%) ","199/30324 (0.7%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 AT5G44380 RWP1 WRKY65 WRKY9 AT3G47040 LOG7 PR4 VSR7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT3G13760","AT3G13760.1","Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: membrane; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G35610.1); Has 1382 Blast hits to 598 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 1353; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).","protein_coding",null,null," ","GO:0015698 inorganic anion transport ","P ","6.99e-13 ","19/157 (12.1%) ","282/30324 (0.9%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 AT5G44380 RWP1 WRKY65 WRKY9 AT3G47040 LOG7 AT1G26250 PR4 VSR7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT1G09176","AT1G09176.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0015706 nitrate transport ","P ","9.55e-13 ","17/157 (10.8%) ","207/30324 (0.7%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 AT5G44380 RWP1 WRKY65 WRKY9 AT3G47040 LOG7 PR4 VSR7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT3G27950","AT3G27950.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G14450.1); Has 3142 Blast hits to 3112 proteins in 96 species: Archae - 0; Bacteria - 88; Metazoa - 0; Fungi - 8; Plants - 3037; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006826 iron ion transport ","P ","2.99e-12 ","14/157 (8.9%) ","121/30324 (0.4%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 FRU WRKY65 WRKY9 AT3G47040 LOG7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT3G60450","AT3G60450.1","Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1); Has 301 Blast hits to 297 proteins in 123 species: Archae - 0; Bacteria - 109; Metazoa - 16; Fungi - 49; Plants - 68; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006820 anion transport ","P ","6.43e-12 ","24/157 (15.3%) ","587/30324 (1.9%) ","FLS5 AT4G26470 PHT1;2 AT3G23190 AT2G39110 PGSIP5 AT5G44380 GSTU21 RWP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 AT1G26250 PR4 ERD9 VSR7 AT3G56200 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT5G44380","AT5G44380.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6276 Blast hits to 6099 proteins in 947 species: Archae - 86; Bacteria - 3186; Metazoa - 42; Fungi - 1722; Plants - 710; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink).","protein_coding",null,null," ","GO:0000041 transition metal ion transport ","P ","6.88e-12 ","17/157 (10.8%) ","233/30324 (0.8%) ","FLS5 AT2G21550 AT4G26470 AT3G23190 AT2G39110 AT5G59530 PGSIP5 FRU WRKY65 WRKY9 AT3G47040 LOG7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT5G24760","AT5G24760.1","GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010106 cellular response to iron ion starvation ","P ","4.66e-11 ","13/157 (8.3%) ","116/30324 (0.4%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT2G21550","AT2G21550.1","Bifunctional dihydrofolate reductase/thymidylate synthase; FUNCTIONS IN: thymidylate synthase activity, dihydrofolate reductase activity; INVOLVED IN: oxidation reduction, glycine biosynthetic process, one-carbon metabolic process, nucleotide biosynthetic process, dTMP biosynthetic process; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 12633 Blast hits to 12576 proteins in 2517 species: Archae - 33; Bacteria - 8296; Metazoa - 499; Fungi - 419; Plants - 87; Viruses - 227; Other Eukaryotes - 3072 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010035 response to inorganic substance ","P ","5.70e-11 ","34/157 (21.7%) ","1417/30324 (4.7%) ","FLS5 SAL1 AT3G23190 TIFY10B CML43 AT2G39110 AT5G59530 GSTU8 PGSIP5 FRU TRX5 AT5G44380 DHAR1 PDIL1-3 RWP1 AT2G19060 WRKY61 WRKY65 WRKY9 ADAP AT3G47040 LOG7 ARP1 PR4 ERD9 BI1 VSR7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3 AT2G46140"," "]
["AT3G05920","AT3G05920.1","Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT5G26690.1); Has 4471 Blast hits to 2060 proteins in 274 species: Archae - 6; Bacteria - 658; Metazoa - 586; Fungi - 145; Plants - 2171; Viruses - 410; Other Eukaryotes - 495 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006811 ion transport ","P ","5.40e-09 ","28/157 (17.8%) ","1122/30324 (3.7%) ","FLS5 AT2G21550 AT4G26470 PHT1;2 AT3G23190 AT2G39110 AT5G59530 PGSIP5 FRU AT5G44380 GSTU21 RWP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 AT1G26250 PR4 ERD9 VSR7 AT3G56200 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3 VHA-E3"," "]
["AT5G14330","AT5G14330.1","unknown protein; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","1.36e-08 ","54/157 (34.4%) ","4028/30324 (13.3%) ","FLS5 PHT1;2 SAL1 AT3G23190 JAZ8 PGDH TIFY10B AT2G39110 AT2G04400 RGLG3 TI1 AT3G60450 GSTU8 PGSIP5 AT5G24760 FRU TRX5 RLP37 TGA10 AT5G44380 DHAR1 PDIL1-3 PBS3 RLP50 DHS1 WRKY65 WRKY9 PMSR2 ADAP AT3G47040 ALD1 LOG7 EDS16 ARP1 PR4 AT5G38340 ERD9 AT5G63990 TRP1 BI1 PDF2.5 AT4G11210 EXT3 NIT3 SBT4.12 MTPA2 AT3G60540 ENDO5 AT5G57970 AT2G18980 PP2-A3 ARGAH2 AT2G46140 VSR5"," "]
["AT3G60540","AT3G60540.1","Preprotein translocase Sec, Sec61-beta subunit protein; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT2G45070.4); Has 393 Blast hits to 393 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 114; Plants - 109; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","1.62e-08 ","52/157 (33.1%) ","3789/30324 (12.5%) ","FLS5 AT4G26470 SAL1 AT3G23190 JAZ8 TIFY10B CML43 AT2G39110 RGLG3 AT5G59530 GSTU8 PGSIP5 GSTU9 FRU TRX5 TGA10 AT5G44380 GSTU21 DHAR1 PDIL1-3 RWP1 PBS3 DHS1 AT2G19060 WRKY61 WRKY65 WRKY9 PMSR2 LEP ADAP AT3G47040 ALD1 LOG7 EDS16 ARP1 TIP4;1 PR4 ERD9 AT5G63990 BI1 VSR7 EXT3 NIT3 BS1 SBT4.12 AT3G22850 F3H MTPA2 ENDO5 AT2G18980 PP2-A3 AT2G46140"," "]
["AT4G18440","AT4G18440.1","L-Aspartase-like family protein; FUNCTIONS IN: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, purine base biosynthetic process, IMP biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; CONTAINS InterPro DOMAIN/s: Adenylosuccinate lyase C-terminal/plant (InterPro:IPR013539), L-Aspartase-like (InterPro:IPR008948), Adenylosuccinate lyase (InterPro:IPR004769), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: L-Aspartase-like family protein (TAIR:AT1G36280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050896 response to stimulus ","P ","6.41e-08 ","71/157 (45.2%) ","6619/30324 (21.8%) ","FLS5 AT4G26470 PHT1;2 SAL1 AT3G23190 JAZ8 PGDH TIFY10B CML43 AT2G39110 AT2G04400 TGA9 RGLG3 AT5G59530 TI1 AT3G60450 GSTU8 PGSIP5 GSTU9 AT5G24760 FRU TRX5 RLP37 TGA10 AT5G44380 GSTU21 DHAR1 PDIL1-3 RWP1 PBS3 RLP50 DHS1 AT2G19060 WRKY61 WRKY65 AT3G55940 WRKY9 PMSR2 LEP ADAP AT3G47040 ALD1 LOG7 EDS16 ARP1 BGLU4 TIP4;1 PR4 AT5G38340 ERD9 AT5G63990 TRP1 BI1 PDF2.5 VSR7 AT4G11210 EXT3 NIT3 BS1 SBT4.12 AT3G22850 F3H MTPA2 AT3G60540 ENDO5 AT5G57970 AT2G18980 PP2-A3 ARGAH2 AT2G46140 VSR5"," "]
["AT5G63990","AT5G63990.1","Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071705 nitrogen compound transport ","P ","1.46e-07 ","22/157 (14.0%) ","783/30324 (2.6%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 AT5G44380 GSTU21 RWP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 PR4 ERD9 VSR7 AT3G56200 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3 AT1G72120"," "]
["AT2G40113","AT2G40113.1","Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G47635.1); Has 53 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009267 cellular response to starvation ","P ","3.90e-07 ","15/157 (9.6%) ","341/30324 (1.1%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT1G72125","AT1G72125.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042594 response to starvation ","P ","5.36e-07 ","15/157 (9.6%) ","349/30324 (1.2%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT5G60520","AT5G60520.1","Late embryogenesis abundant (LEA) protein-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein-related / LEA protein-related (TAIR:AT5G60530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033554 cellular response to stress ","P ","6.03e-07 ","29/157 (18.5%) ","1474/30324 (4.9%) ","FLS5 PHT1;2 AT3G23190 PGDH TIFY10B AT2G39110 AT2G04400 AT3G60450 PGSIP5 FRU TGA10 PDIL1-3 PBS3 WRKY65 WRKY9 PMSR2 AT3G47040 LOG7 EDS16 TRP1 BI1 NIT3 SBT4.12 MTPA2 AT3G60540 ENDO5 AT5G57970 AT2G18980 PP2-A3"," "]
["AT1G35513","AT1G35513.1","pseudogene of isochorismate synthase-related / isochorismate mutase-related","pseudogene",null,null," ","GO:0031669 cellular response to nutrient levels ","P ","6.78e-07 ","15/157 (9.6%) ","355/30324 (1.2%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT2G39110","AT2G39110.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 116486 Blast hits to 115184 proteins in 3894 species: Archae - 105; Bacteria - 13150; Metazoa - 42637; Fungi - 10037; Plants - 33183; Viruses - 432; Other Eukaryotes - 16942 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","1.13e-06 ","21/157 (13.4%) ","792/30324 (2.6%) ","FLS5 AT3G23190 AT2G39110 PGSIP5 FRU AT5G44380 RWP1 PBS3 WRKY65 WRKY9 AT3G47040 LOG7 EDS16 PR4 ERD9 VSR7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT2G32487","AT2G32487.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031667 response to nutrient levels ","P ","1.29e-06 ","15/157 (9.6%) ","372/30324 (1.2%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT3G55940","AT3G55940.1","Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase C 2 (TAIR:AT3G08510.2); Has 7225 Blast hits to 3392 proteins in 352 species: Archae - 10; Bacteria - 635; Metazoa - 3351; Fungi - 1029; Plants - 675; Viruses - 45; Other Eukaryotes - 1480 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031668 cellular response to extracellular stimulus ","P ","2.71e-06 ","15/157 (9.6%) ","393/30324 (1.3%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT4G26470","AT4G26470.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1); Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0; Bacteria - 25; Metazoa - 3748; Fungi - 1101; Plants - 3090; Viruses - 0; Other Eukaryotes - 1336 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071496 cellular response to external stimulus ","P ","2.81e-06 ","15/157 (9.6%) ","394/30324 (1.3%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT5G54530","AT5G54530.1","Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G61667.1); Has 418 Blast hits to 418 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 418; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","3.00e-06 ","37/157 (23.6%) ","2459/30324 (8.1%) ","FLS5 SAL1 AT3G23190 JAZ8 TIFY10B AT2G39110 RGLG3 PGSIP5 FRU AT5G44380 DHAR1 PDIL1-3 RWP1 PBS3 DHS1 WRKY65 WRKY9 LEP ADAP AT3G47040 ALD1 LOG7 EDS16 ARP1 PR4 ERD9 BI1 VSR7 BS1 SBT4.12 AT3G22850 F3H MTPA2 ENDO5 AT2G18980 PP2-A3 AT2G46140"," "]
["AT4G04632","AT4G04632.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0030001 metal ion transport ","P ","4.27e-06 ","17/157 (10.8%) ","542/30324 (1.8%) ","FLS5 AT2G21550 AT4G26470 AT3G23190 AT2G39110 AT5G59530 PGSIP5 FRU WRKY65 WRKY9 AT3G47040 LOG7 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT1G26250","AT1G26250.1","Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08370.1); Has 289174 Blast hits to 44674 proteins in 1767 species: Archae - 806; Bacteria - 48932; Metazoa - 103337; Fungi - 38580; Plants - 50919; Viruses - 7655; Other Eukaryotes - 38945 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006812 cation transport ","P ","4.73e-06 ","20/157 (12.7%) ","776/30324 (2.6%) ","FLS5 AT2G21550 AT4G26470 AT3G23190 AT2G39110 AT5G59530 PGSIP5 FRU GSTU21 WRKY65 WRKY9 AT3G47040 LOG7 ERD9 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3 VHA-E3"," "]
["AT3G29635","AT3G29635.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G29680.1); Has 2281 Blast hits to 2266 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 38; Plants - 2241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009991 response to extracellular stimulus ","P ","4.96e-06 ","15/157 (9.6%) ","411/30324 (1.4%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 PGSIP5 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT2G16980","AT2G16980.2","Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: response to antibiotic, tetracycline transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051716 cellular response to stimulus ","P ","9.67e-06 ","39/157 (24.8%) ","2811/30324 (9.3%) ","FLS5 PHT1;2 SAL1 AT3G23190 JAZ8 PGDH TIFY10B AT2G39110 AT2G04400 TGA9 RGLG3 AT3G60450 PGSIP5 FRU RLP37 TGA10 PDIL1-3 PBS3 RLP50 WRKY65 AT3G55940 WRKY9 PMSR2 AT3G47040 ALD1 LOG7 EDS16 TIP4;1 TRP1 BI1 NIT3 BS1 SBT4.12 MTPA2 AT3G60540 ENDO5 AT5G57970 AT2G18980 PP2-A3"," "]
["AT2G19060","AT2G19060.1","SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G19050.1); Has 3295 Blast hits to 3255 proteins in 153 species: Archae - 0; Bacteria - 219; Metazoa - 0; Fungi - 6; Plants - 3058; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006810 transport ","P ","2.05e-05 ","40/157 (25.5%) ","3014/30324 (9.9%) ","FLS5 AT2G21550 AT4G26470 PHT1;2 AT3G23190 PGDH TIFY10B AT2G39110 AT5G59530 PGSIP5 NIP3;1 FRU AT5G44380 GSTU21 RWP1 PBS3 MVP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 EDS16 AT1G26250 TIP4;1 PR4 ERD9 BI1 VSR7 AT3G56200 SBT4.12 MTPA2 AT3G60540 ENDO5 AT2G18980 PP2-A3 VHA-E3 SGP1 AT1G72120 VSR5"," "]
["AT3G03560","AT3G03560.1","unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051234 establishment of localization ","P ","4.11e-05 ","40/157 (25.5%) ","3091/30324 (10.2%) ","FLS5 AT2G21550 AT4G26470 PHT1;2 AT3G23190 PGDH TIFY10B AT2G39110 AT5G59530 PGSIP5 NIP3;1 FRU AT5G44380 GSTU21 RWP1 PBS3 MVP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 EDS16 AT1G26250 TIP4;1 PR4 ERD9 BI1 VSR7 AT3G56200 SBT4.12 MTPA2 AT3G60540 ENDO5 AT2G18980 PP2-A3 VHA-E3 SGP1 AT1G72120 VSR5"," "]
["AT5G44565","AT5G44565.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051179 localization ","P ","7.83e-05 ","41/157 (26.1%) ","3295/30324 (10.9%) ","FLS5 AT2G21550 AT4G26470 PHT1;2 AT3G23190 PGDH TIFY10B AT2G39110 AT5G59530 PGSIP5 NIP3;1 FRU AT5G44380 GSTU21 RWP1 PBS3 MVP1 WRKY65 AT3G55940 WRKY9 AT3G47040 AT3G01760 LOG7 EDS16 AT1G26250 TIP4;1 PR4 ERD9 BI1 VSR7 AT3G56200 SBT4.12 MTPA2 AT3G60540 ENDO5 AT2G18980 PP2-A3 VHA-E3 SGP1 AT1G72120 VSR5"," "]
["AT4G11655","AT4G11655.1","Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044765 single-organism transport ","P ","1.27e-04 ","36/157 (22.9%) ","2711/30324 (8.9%) ","FLS5 AT2G21550 AT4G26470 PHT1;2 AT3G23190 PGDH TIFY10B AT2G39110 AT5G59530 PGSIP5 FRU AT5G44380 GSTU21 RWP1 PBS3 MVP1 WRKY65 WRKY9 AT3G47040 AT3G01760 LOG7 EDS16 AT1G26250 PR4 ERD9 BI1 VSR7 AT3G56200 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3 VHA-E3 AT1G72120 VSR5"," "]
["AT5G35950","AT5G35950.1","Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G35940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007154 cell communication ","P ","3.02e-04 ","30/157 (19.1%) ","2073/30324 (6.8%) ","FLS5 PHT1;2 SAL1 AT3G23190 JAZ8 TIFY10B AT2G39110 TGA9 RGLG3 PGSIP5 RLP37 TGA10 PBS3 RLP50 WRKY65 AT3G55940 WRKY9 AT3G47040 ALD1 LOG7 EDS16 TIP4;1 BI1 NIT3 BS1 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT1G24320","AT1G24320.1","Six-hairpin glycosidases superfamily protein; FUNCTIONS IN: mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity; INVOLVED IN: oligosaccharide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: glucosidase 1 (TAIR:AT1G67490.1); Has 471 Blast hits to 459 proteins in 200 species: Archae - 2; Bacteria - 99; Metazoa - 113; Fungi - 132; Plants - 45; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010043 response to zinc ion ","P ","7.26e-04 ","6/157 (3.8%) ","59/30324 (0.2%) ","AT5G59530 DHAR1 AT2G19060 WRKY61 WRKY9 MTPA2"," "]
["AT5G58540","AT5G58540.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G07150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009605 response to external stimulus ","P ","1.50e-03 ","17/157 (10.8%) ","818/30324 (2.7%) ","FLS5 PHT1;2 AT3G23190 AT2G39110 TGA9 PGSIP5 PBS3 WRKY65 WRKY9 AT3G47040 LOG7 NIT3 SBT4.12 MTPA2 ENDO5 AT2G18980 PP2-A3"," "]
["AT1G30550","AT1G30550.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: RNA capping, RNA methylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA cap guanine-N2 methyltransferase (InterPro:IPR019012); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G45231.2); Has 1500 Blast hits to 1060 proteins in 507 species: Archae - 106; Bacteria - 580; Metazoa - 259; Fungi - 264; Plants - 97; Viruses - 3; Other Eukaryotes - 191 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010033 response to organic substance ","P ","6.91e-03 ","33/157 (21.0%) ","2805/30324 (9.3%) ","FLS5 AT4G26470 SAL1 AT3G23190 JAZ8 TIFY10B RGLG3 AT5G59530 GSTU8 GSTU9 FRU TGA10 GSTU21 DHAR1 PDIL1-3 PBS3 DHS1 LEP ADAP ALD1 LOG7 EDS16 ARP1 TIP4;1 PR4 ERD9 AT5G63990 BI1 EXT3 BS1 AT3G22850 F3H AT2G18980"," "]
["AT5G07770","AT5G07770.1","Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 32498 Blast hits to 13926 proteins in 764 species: Archae - 52; Bacteria - 3235; Metazoa - 13136; Fungi - 3419; Plants - 6778; Viruses - 1558; Other Eukaryotes - 4320 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G47200","AT2G47200.1","unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT1G30820","AT1G30820.1","CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink).","protein_coding",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT5G19100","AT5G19100.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT3G22800","AT3G22800.1","Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 229273 Blast hits to 72952 proteins in 2610 species: Archae - 422; Bacteria - 37303; Metazoa - 68145; Fungi - 17365; Plants - 71911; Viruses - 5341; Other Eukaryotes - 28786 (source: NCBI BLink).","protein_coding",null,null," ","GO:0003824 catalytic activity ","F ","2.67e-03 ","61/157 (38.9%) ","6784/30324 (22.4%) ","FLS5 SAL1 AT4G18440 PGDH PIA1 AT5G58540 AT1G30820 GPAT5 AT2G39110 AT2G04400 RGLG3 AT5G59530 AT3G55180 GSTU8 AT1G24320 PGSIP5 GSTU9 AT2G37440 TRX5 AT3G29635 KP1 RLP37 GSTU21 DHAR1 PDIL1-3 RWP1 PBS3 RLP50 DHS1 PLP5 AT2G19060 MVP1 AT3G55940 MES18 PMSR2 AT3G47040 ALD1 LOG7 ATCSLA15 EDS16 AAE18 BGLU4 PR4 GDPD5 ERD9 AT5G63990 TRP1 AT2G38740 PFK3 NIT3 SBT4.12 F3H FUT6 BGLU17 ENDO5 AT5G57970 AT2G18980 AT3G25810 AT3G44840 SPP1 ARGAH2"," "]
["AT4G12050","AT4G12050.1","Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G22810.1); Has 6654 Blast hits to 4300 proteins in 274 species: Archae - 0; Bacteria - 187; Metazoa - 2435; Fungi - 660; Plants - 926; Viruses - 16; Other Eukaryotes - 2430 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G11210","AT4G11210.1","Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, petal, hypocotyl, cauline leaf, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT5G66985","AT5G66985.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G02090","AT4G02090.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G38340","AT5G38340.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G65850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G21840","AT2G21840.1","Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G21850.1); Has 2782 Blast hits to 662 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 0; Plants - 2730; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G44840","AT3G44840.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: farnesoic acid carboxyl-O-methyltransferase (TAIR:AT3G44860.1); Has 872 Blast hits to 866 proteins in 112 species: Archae - 0; Bacteria - 44; Metazoa - 9; Fungi - 5; Plants - 711; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G23190","AT3G23190.1","HR-like lesion-inducing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, callus; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT3G23180.1); Has 132 Blast hits to 132 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G11572","AT1G11572.1","Encodes a Plant thionin family protein","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G22850","AT3G22850.1","Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1324 Blast hits to 1324 proteins in 483 species: Archae - 0; Bacteria - 791; Metazoa - 46; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G63410","AT1G63410.1","Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G14260.1); Has 268 Blast hits to 267 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 268; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G63950","AT1G63950.1","Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT1G01490.2); Has 169 Blast hits to 169 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G46060","AT5G46060.1","Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G24600.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G10720","AT4G10720.1","Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54620.1); Has 21854 Blast hits to 10883 proteins in 482 species: Archae - 19; Bacteria - 1460; Metazoa - 11922; Fungi - 1177; Plants - 2352; Viruses - 52; Other Eukaryotes - 4872 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G22230","AT4G22230.1","Encodes a defensin-like (DEFL) family protein.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G46140","AT2G46140.1","Late embryogenesis abundant protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 348 Blast hits to 348 proteins in 99 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 325; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G44050","AT1G44050.1","Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G55780.1); Has 1688 Blast hits to 654 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 1656; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G43535","AT2G43535.1","Encodes a defensin-like (DEFL) family protein.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G62280","AT3G62280.1","GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3192 Blast hits to 3150 proteins in 118 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 17; Plants - 3087; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G04320","AT3G04320.1","Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: Kunitz family trypsin and protease inhibitor protein (TAIR:AT3G04330.1); Has 157 Blast hits to 157 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G72120","AT1G72120.1","Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72125.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G14530","AT4G14530.1","BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97 (TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G59530","AT5G59530.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G59540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G56200","AT3G56200.1","Encodes a putative amino acid transporter.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G54770","AT3G54770.1","RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, gynoecium, carpel, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1); Has 10710 Blast hits to 8449 proteins in 510 species: Archae - 0; Bacteria - 384; Metazoa - 5849; Fungi - 946; Plants - 2782; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G49030","AT1G49030.1","PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18460.1); Has 749 Blast hits to 748 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 45; Plants - 538; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G52720","AT5G52720.1","Copper transport protein family; BEST Arabidopsis thaliana protein match is: Copper transport protein family (TAIR:AT5G52670.1); Has 113 Blast hits to 106 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G23850","AT1G23850.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G51330","AT3G51330.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51350.1); Has 2269 Blast hits to 2259 proteins in 198 species: Archae - 0; Bacteria - 13; Metazoa - 189; Fungi - 203; Plants - 1703; Viruses - 2; Other Eukaryotes - 159 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G01760","AT3G01760.1","Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G61270.1); Has 4381 Blast hits to 4371 proteins in 390 species: Archae - 5; Bacteria - 296; Metazoa - 1264; Fungi - 731; Plants - 1536; Viruses - 3; Other Eukaryotes - 546 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G57970","AT5G57970.1","DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G19200","AT3G19200.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G04400","AT2G04400.1","Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, copper ion binding; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G48220.1); Has 8050 Blast hits to 8050 proteins in 2237 species: Archae - 197; Bacteria - 5328; Metazoa - 3; Fungi - 164; Plants - 82; Viruses - 0; Other Eukaryotes - 2276 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G50640","AT3G50640.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G18980","AT2G18980.1","Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase family protein (TAIR:AT4G30170.1); Has 4579 Blast hits to 4551 proteins in 298 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 207; Plants - 4299; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G47040","AT3G47040.2","Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 3, active site (InterPro:IPR019800); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT3G47000.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G41040","AT5G41040.1","Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G51350","AT3G51350.1","Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51330.1); Has 2922 Blast hits to 2911 proteins in 289 species: Archae - 2; Bacteria - 28; Metazoa - 564; Fungi - 406; Plants - 1751; Viruses - 2; Other Eukaryotes - 169 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G03505","AT2G03505.1","Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G13830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G55180","AT3G55180.1","alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39400.1); Has 4129 Blast hits to 4129 proteins in 1315 species: Archae - 32; Bacteria - 2874; Metazoa - 141; Fungi - 140; Plants - 467; Viruses - 36; Other Eukaryotes - 439 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G25810","AT3G25810.1","Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G37440","AT2G37440.1","DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G01900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G13410","AT4G13410.1","encodes a gene similar to cellulose synthase","protein_coding"," (ATCSLA15)","CELLULOSE SYNTHASE LIKE A15 (CSLA15); (ATCSLA15)"," ",{"$nulls":6}," "]
["AT1G47590","AT1G47590.1","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","pseudogene"," (ATPUP20)"," (ATPUP20)"," ",{"$nulls":6}," "]
["AT5G63660","AT5G63660.1","Predicted to encode a PR (pathogenesis-related) protein.  Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","protein_coding"," (PDF2.5)"," (PDF2.5);LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74 (LCR74)"," ",{"$nulls":6}," "]
["AT5G63980","AT5G63980.1","Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast.  It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.","protein_coding"," (SAL1)"," (SAL1);ALTERED EXPRESSION OF APX2 8 (ALX8); (ATSAL1); (ATFRY1);FIERY1 (FRY1);ROTUNDA 1 (RON1);SUPPRESSORS OF PIN1 OVEREXPRESSION 1 (SUPO1);HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (HOS2)"," ",{"$nulls":6}," "]
["AT5G54840","AT5G54840.1","Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.","protein_coding"," (SGP1)"," (SGP1); (ATSGP1)"," ",{"$nulls":6}," "]
["AT1G74950","AT1G74950.1","TIFY10B; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 1 (TAIR:AT1G19180.1); Has 432 Blast hits to 427 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 432; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding"," (TIFY10B)"," (TIFY10B);JASMONATE-ZIM-DOMAIN PROTEIN 2 (JAZ2)"," ",{"$nulls":6}," "]
["AT3G20960","AT3G20960.1","member of CYP705A","protein_coding","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 33 (CYP705A33)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 33 (CYP705A33)"," ",{"$nulls":6}," "]
["AT3G26320","AT3G26320.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 36 (CYP71B36)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 36 (CYP71B36)"," ",{"$nulls":6}," "]
["AT4G39980","AT4G39980.1","Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.","protein_coding","3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1 (DHS1)","3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1 (DHS1)"," ",{"$nulls":6}," "]
["AT1G17745","AT1G17745.2","encodes a 3-Phosphoglycerate dehydrogenase","protein_coding","3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)","3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)"," ",{"$nulls":6}," "]
["AT5G24420","AT5G24420.1","6-phosphogluconolactonase 5 (PGL5); FUNCTIONS IN: 6-phosphogluconolactonase activity; INVOLVED IN: pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","6-PHOSPHOGLUCONOLACTONASE 5 (PGL5)","6-PHOSPHOGLUCONOLACTONASE 5 (PGL5)"," ",{"$nulls":6}," "]
["AT1G74500","AT1G74500.1","Encodes a basic helix?loop?helix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves  to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the  hypophysis cell division plane.","protein_coding","ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (BS1)","BASIC HELIX-LOOP-HELIX PROTEIN 135 (BHLH135);ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (ATBS1);TARGET OF MONOPTEROS 7 (TMO7);ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (BS1);PACLOBUTRAZOL RESISTANCE 3 (PRE3)"," ",{"$nulls":6}," "]
["AT1G55320","AT1G55320.1","Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.","protein_coding","ACYL-ACTIVATING ENZYME 18 (AAE18)","ACYL-ACTIVATING ENZYME 18 (AAE18)"," ",{"$nulls":6}," "]
["AT2G13810","AT2G13810.1","AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink).","protein_coding","AGD2-LIKE DEFENSE RESPONSE PROTEIN 1 (ALD1)","EDS TWO SUPPRESSOR 5 (EDTS5);AGD2-LIKE DEFENSE RESPONSE PROTEIN 1 (ALD1)"," ",{"$nulls":6}," "]
["AT4G08870","AT4G08870.1","Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment.  It is involved in the defense response to B.cinerea.","protein_coding","ARGININE AMIDOHYDROLASE 2 (ARGAH2)","ARGININE AMIDOHYDROLASE 2 (ARGAH2)"," ",{"$nulls":6}," "]
["AT1G16060","AT1G16060.1","Encodes ADAP, an AP2-domain protein that interacts with ARIA.  ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.","protein_coding","ARIA-INTERACTING DOUBLE AP2 DOMAIN PROTEIN (ADAP)","ARIA-INTERACTING DOUBLE AP2 DOMAIN PROTEIN (ADAP)"," ",{"$nulls":6}," "]
["AT5G13320","AT5G13320.1","Encodes an enzyme capable of conjugating amino acids to 4-substituted benzoates. 4-HBA (4-hydroxybenzoic acid) and pABA (4-aminobenzoate) may be targets of the enzyme in Arabidopsis, leading to the production of pABA-Glu, 4HBA-Glu, or other related compounds. This enzyme is involved in disease-resistance signaling. It is required for the accumulation of salicylic acid, activation of defense responses, and resistance to Pseudomonas syringae. Salicylic acid can decrease this enzyme's activity in vitro and may act as a competitive inhibitor. Expression of PBS3/GH3.12 can be detected in cotyledons, true leaves, hypocotyls, and occasionally in some parts of roots from 10-day-old seedlings.  No expression has been detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants.","protein_coding","AVRPPHB SUSCEPTIBLE 3 (PBS3)","GRETCHEN HAGEN 3.12 (GH3.12); (ATGH3.12);HOPW1-1-INTERACTING 3 (WIN3);GH3-LIKE DEFENSE GENE 1 (GDG1);AVRPPHB SUSCEPTIBLE 3 (PBS3)"," ",{"$nulls":6}," "]
["AT5G47120","AT5G47120.1","Encodes BI-1, a homolog of mammalian Bax inhibitor 1.  Functions as an attenuator of biotic and abiotic types of cell death.  Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.","protein_coding","BAX INHIBITOR 1 (BI1)","ARABIDOPSIS BAX INHIBITOR 1 (ATBI-1);BAX INHIBITOR 1 (BI1);BAX INHIBITOR 1 (ATBI1); (BI-1)"," ",{"$nulls":6}," "]
["AT2G44480","AT2G44480.1","beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 11437 Blast hits to 11059 proteins in 1476 species: Archae - 140; Bacteria - 7925; Metazoa - 696; Fungi - 198; Plants - 1473; Viruses - 0; Other Eukaryotes - 1005 (source: NCBI BLink).","protein_coding","BETA GLUCOSIDASE 17 (BGLU17)","BETA GLUCOSIDASE 17 (BGLU17)"," ",{"$nulls":6}," "]
["AT1G60090","AT1G60090.1","beta glucosidase 4 (BGLU4); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 2 (TAIR:AT4G22100.1); Has 11230 Blast hits to 10889 proteins in 1481 species: Archae - 144; Bacteria - 7786; Metazoa - 705; Fungi - 199; Plants - 1443; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).","protein_coding","BETA GLUCOSIDASE 4 (BGLU4)","BETA GLUCOSIDASE 4 (BGLU4)"," ",{"$nulls":6}," "]
["AT5G44460","AT5G44460.1","calmodulin like 43 (CML43); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 15485 Blast hits to 11560 proteins in 1261 species: Archae - 1; Bacteria - 65; Metazoa - 6030; Fungi - 3167; Plants - 4134; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).","protein_coding","CALMODULIN LIKE 43 (CML43)","CALMODULIN LIKE 43 (CML43)"," ",{"$nulls":6}," "]
["AT2G36100","AT2G36100.1","Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G11550.1); Has 599 Blast hits to 599 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 599; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN 1 (CASP1)","CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN 1 (CASP1)"," ",{"$nulls":6}," "]
["AT1G19570","AT1G19570.1","Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","protein_coding","DEHYDROASCORBATE REDUCTASE (DHAR1)","DEHYDROASCORBATE REDUCTASE (DHAR1); (ATDHAR1);DEHYDROASCORBATE REDUCTASE 5 (DHAR5)"," ",{"$nulls":6}," "]
["AT1G10370","AT1G10370.1","Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses.","protein_coding","EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9)","GLUTATHIONE S-TRANSFERASE 30 (GST30);GLUTATHIONE S-TRANSFERASE TAU 17 (ATGSTU17);GLUTATHIONE S-TRANSFERASE U17 (GSTU17);EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9);GLUTATHIONE S-TRANSFERASE 30B (GST30B)"," ",{"$nulls":6}," "]
["AT4G21600","AT4G21600.1","Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches.  It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).","protein_coding","ENDONUCLEASE 5 (ENDO5)","ENDONUCLEASE 5 (ENDO5)"," ",{"$nulls":6}," "]
["AT1G74710","AT1G74710.2","Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid.  Its function may be redundant with that of ICS2 (AT1G18870).","protein_coding","ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16 (EDS16)","ISOCHORISMATE SYNTHASE 1 (ICS1);SALICYLIC ACID INDUCTION DEFICIENT 2 (SID2);ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16 (EDS16)"," ",{"$nulls":6}," "]
["AT2G28670","AT2G28670.1","esb1 mutants have increased levels of suberin and altered levels of several ions in their leaves.","protein_coding","ENHANCED SUBERIN 1 (ESB1)","ENHANCED SUBERIN 1 (ESB1)"," ",{"$nulls":6}," "]
["AT2G39050","AT2G39050.1","Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates.","protein_coding","EUONYMUS LECTIN S3 (EULS3)"," (ARATHEULS3);EUONYMUS LECTIN S3 (EULS3)"," ",{"$nulls":6}," "]
["AT1G21310","AT1G21310.1","Encodes extensin 3.","protein_coding","EXTENSIN 3 (EXT3)","EXTENSIN 3 (ATEXT3);EXTENSIN 3 (EXT3);ROOT-SHOOT-HYPOCOTYL DEFECTIVE (RSH)"," ",{"$nulls":6}," "]
["AT2G28160","AT2G28160.1","Encodes a putative transcription factor that regulates iron uptake responses.  mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency.  The expression of many iron-regulated genes is dependent on FIT1.  It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.","protein_coding","FER-LIKE REGULATOR OF IRON UPTAKE (FRU)","FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1 (FIT1);BASIC HELIX-LOOP-HELIX PROTEIN 29 (ATBHLH029);ARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1 (ATFIT1);BASIC HELIX-LOOP-HELIX PROTEIN 29 (BHLH029);BASIC HELIX-LOOP-HELIX PROTEIN 29 (ATBHLH29);FER-LIKE REGULATOR OF IRON UPTAKE (FRU)"," ",{"$nulls":6}," "]
["AT3G51240","AT3G51240.1","Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR).","protein_coding","FLAVANONE 3-HYDROXYLASE (F3H)","FLAVANONE 3-HYDROXYLASE (F3H); (F3'H);TRANSPARENT TESTA 6 (TT6)"," ",{"$nulls":6}," "]
["AT5G63600","AT5G63600.2","encodes a protein whose sequence is similar to flavonol synthase","protein_coding","FLAVONOL SYNTHASE 5 (FLS5)","FLAVONOL SYNTHASE 5 (FLS5); (ATFLS5)"," ",{"$nulls":6}," "]
["AT1G14080","AT1G14080.1","member of Xyloglucan fucosyltransferase family","protein_coding","FUCOSYLTRANSFERASE 6 (FUT6)"," (ATFUT6);FUCOSYLTRANSFERASE 6 (FUT6)"," ",{"$nulls":6}," "]
["AT1G78360","AT1G78360.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 21 (GSTU21)","GLUTATHIONE S-TRANSFERASE TAU 21 (GSTU21);GLUTATHIONE S-TRANSFERASE TAU 21 (ATGSTU21)"," ",{"$nulls":6}," "]
["AT3G09270","AT3G09270.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 8 (GSTU8)","GLUTATHIONE S-TRANSFERASE TAU 8 (ATGSTU8);GLUTATHIONE S-TRANSFERASE TAU 8 (GSTU8)"," ",{"$nulls":6}," "]
["AT5G62480","AT5G62480.1","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","protein_coding","GLUTATHIONE S-TRANSFERASE TAU 9 (GSTU9)","GLUTATHIONE S-TRANSFERASE 14B (GST14B);GLUTATHIONE S-TRANSFERASE TAU 9 (GSTU9);GLUTATHIONE S-TRANSFERASE TAU 9 (ATGSTU9);GLUTATHIONE S-TRANSFERASE 14 (GST14)"," ",{"$nulls":6}," "]
["AT3G11430","AT3G11430.1","Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.","protein_coding","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5 (GPAT5)","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5 (ATGPAT5);GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5 (GPAT5)"," ",{"$nulls":6}," "]
["AT1G74210","AT1G74210.1","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","protein_coding","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 5 (GDPD5)"," (AtGDPD5);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 5 (GDPD5)"," ",{"$nulls":6}," "]
["AT1G30135","AT1G30135.1","jasmonate-zim-domain protein 8 (JAZ8); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 7 (TAIR:AT2G34600.1); Has 89 Blast hits to 89 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","JASMONATE-ZIM-DOMAIN PROTEIN 8 (JAZ8)"," (tify5a);JASMONATE-ZIM-DOMAIN PROTEIN 8 (JAZ8)"," ",{"$nulls":6}," "]
["AT3G44730","AT3G44730.1","kinesin-like protein 1 (KP1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT2G47500.1); Has 10649 Blast hits to 10123 proteins in 338 species: Archae - 0; Bacteria - 46; Metazoa - 4773; Fungi - 1367; Plants - 1910; Viruses - 0; Other Eukaryotes - 2553 (source: NCBI BLink).","protein_coding","KINESIN-LIKE PROTEIN 1 (KP1)","KINESIN-LIKE PROTEIN 1 (KP1); (AtKIN14h);ARABIDOPSIS KINESIN-LIKE PROTEIN 1 (ATKP1)"," ",{"$nulls":6}," "]
["AT1G32300","AT1G32300.1","D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 2573 Blast hits to 2542 proteins in 768 species: Archae - 19; Bacteria - 1742; Metazoa - 82; Fungi - 220; Plants - 254; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).","protein_coding","L -GULONO-1,4-LACTONE ( L -GULL) OXIDASE 1 (GULLO1)"," (ATGULLO1);L -GULONO-1,4-LACTONE ( L -GULL) OXIDASE 1 (GULLO1)"," ",{"$nulls":6}," "]
["AT5G13910","AT5G13910.1","Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE.  Acts as a positive regulator of gibberellic acid-induced germination.","protein_coding","LEAFY PETIOLE (LEP)","LEAFY PETIOLE (LEP)"," ",{"$nulls":6}," "]
["AT5G06300","AT5G06300.1","Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5281 Blast hits to 5279 proteins in 1570 species: Archae - 23; Bacteria - 3686; Metazoa - 10; Fungi - 132; Plants - 400; Viruses - 0; Other Eukaryotes - 1030 (source: NCBI BLink).","protein_coding","LONELY GUY 7 (LOG7)","LONELY GUY 7 (LOG7)"," ",{"$nulls":6}," "]
["AT3G58810","AT3G58810.1","Member of Zinc transporter (ZAT) family. Contributes to basic cellular Zn tolerance and controls Zn partitioning, particularly under conditions of high  rates of Zn influx into the root symplasm. Localizes to  the vacuolar membrane.","protein_coding","METAL TOLERANCE PROTEIN A2 (MTPA2)","METAL TOLERANCE PROTEIN A2 (MTPA2);ARABIDOPSIS METAL TOLERANCE PROTEIN 3 (ATMTP3);METAL TOLERANCE PROTEIN 3 (MTP3); (ATMTPA2)"," ",{"$nulls":6}," "]
["AT5G58310","AT5G58310.1","Encodes a protein shown to have methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","protein_coding","METHYL ESTERASE 18 (MES18)","METHYL ESTERASE 18 (MES18);ARABIDOPSIS THALIANA METHYL ESTERASE 18 (ATMES18)"," ",{"$nulls":6}," "]
["AT1G35260","AT1G35260.1","MLP-like protein 165 (MLP165); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 168 (TAIR:AT1G35310.1); Has 407 Blast hits to 375 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","MLP-LIKE PROTEIN 165 (MLP165)","MLP-LIKE PROTEIN 165 (MLP165)"," ",{"$nulls":6}," "]
["AT1G54030","AT1G54030.1","Encodes a vacuolar protein.  Mutation causes organizational defects in the endoplasmic reticulum and aberrant protein trafficking in the plant secretory pathway.","protein_coding","MODIFIED VACUOLE PHENOTYPE 1 (MVP1)","MODIFIED VACUOLE PHENOTYPE 1 (MVP1);GOLGI DEFECTS 36 (GOLD36)"," ",{"$nulls":6}," "]
["AT5G26660","AT5G26660.1","myb domain protein 86 (MYB86); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 9095 Blast hits to 8321 proteins in 479 species: Archae - 0; Bacteria - 3; Metazoa - 831; Fungi - 514; Plants - 5926; Viruses - 6; Other Eukaryotes - 1815 (source: NCBI BLink).","protein_coding","MYB DOMAIN PROTEIN 86 (MYB86)","MYB DOMAIN PROTEIN 4 (ATMYB4-old);MYB DOMAIN PROTEIN 86 (MYB86);MYB DOMAIN PROTEIN 86 (ATMYB86);MYB DOMAIN PROTEIN 4 (ATMYB4)"," ",{"$nulls":6}," "]
["AT1G02220","AT1G02220.1","NAC domain containing protein 3 (NAC003); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 48 (TAIR:AT3G04420.1); Has 2600 Blast hits to 2593 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 2598; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","NAC DOMAIN CONTAINING PROTEIN 3 (NAC003)","NAC DOMAIN CONTAINING PROTEIN 3 (NAC003);NAC DOMAIN CONTAINING PROTEIN 3 (ANAC003)"," ",{"$nulls":6}," "]
["AT3G44320","AT3G44320.1","This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels.  It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.","protein_coding","NITRILASE 3 (NIT3)","NITRILASE 3 (NIT3);NITRILASE 3 (AtNIT3)"," ",{"$nulls":6}," "]
["AT1G31885","AT1G31885.1","NOD26-like intrinsic protein 3;1 (NIP3;1); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 1;2 (TAIR:AT4G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","NOD26-LIKE INTRINSIC PROTEIN 3;1 (NIP3;1)","NOD26-LIKE INTRINSIC PROTEIN 3;1 (NIP3;1)"," ",{"$nulls":6}," "]
["AT4G37060","AT4G37060.2","Patatin-related phospholipase A. Expressed weakly in roots, cotyledons, and leaves but is transcriptionally induced  by auxin. Phosphorylation by calcium-dependent protein kinases in vitro  enhances its activity.","protein_coding","PATATIN-LIKE PROTEIN 5 (PLP5)","PATATIN-LIKE PROTEIN 5 (PLP5)"," ",{"$nulls":6}," "]
["AT3G04720","AT3G04720.1","Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.","protein_coding","PATHOGENESIS-RELATED 4 (PR4)","PATHOGENESIS-RELATED 4 (PR4); (PR-4);HEVEIN-LIKE (HEL)"," ",{"$nulls":6}," "]
["AT3G54960","AT3G54960.1","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","protein_coding","PDI-LIKE 1-3 (PDIL1-3)","ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 1 (ATPDI1);PDI-LIKE 1-3 (PDIL1-3);PDI-LIKE 1-3 (ATPDIL1-3);PROTEIN DISULFIDE ISOMERASE 1 (PDI1)"," ",{"$nulls":6}," "]
["AT5G07460","AT5G07460.1","ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.","protein_coding","PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2 (PMSR2)","ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 2 (ATMSRA2);PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2 (PMSR2)"," ",{"$nulls":6}," "]
["AT2G26820","AT2G26820.1","phloem protein 2-A3 (PP2-A3); CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33900.1); Has 7075 Blast hits to 5270 proteins in 530 species: Archae - 11; Bacteria - 693; Metazoa - 2878; Fungi - 405; Plants - 651; Viruses - 87; Other Eukaryotes - 2350 (source: NCBI BLink).","protein_coding","PHLOEM PROTEIN 2-A3 (PP2-A3)","PHLOEM PROTEIN 2-A3 (PP2-A3);PHLOEM PROTEIN 2-A3 (ATPP2-A3)"," ",{"$nulls":6}," "]
["AT5G43370","AT5G43370.1","Encodes a phosphate transporter Pht1;2.  Members of the Pht1 family of phosphate transporters include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341)","protein_coding","PHOSPHATE TRANSPORTER 2 (PHT1;2)","PHOSPHATE TRANSPORTER 2 (PHT1;2);ARABIDOPSIS PHOSPHATE TRANSPORTER 1 (APT1);PHOSPHATE TRANSPORTER 2 (PHT2)"," ",{"$nulls":6}," "]
["AT4G26270","AT4G26270.1","phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","PHOSPHOFRUCTOKINASE 3 (PFK3)","PHOSPHOFRUCTOKINASE 3 (PFK3)"," ",{"$nulls":6}," "]
["AT1G08990","AT1G08990.1","plant glycogenin-like starch initiation protein 5 (PGSIP5); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 4 (TAIR:AT1G54940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5 (PGSIP5)","GLUCURONIC ACID SUBSTITUTION OF XYLAN 5 (GUX5);PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5 (PGSIP5)"," ",{"$nulls":6}," "]
["AT2G20630","AT2G20630.2","PP2C induced by AVRRPM1 (PIA1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding","PP2C INDUCED BY AVRRPM1 (PIA1)","PP2C INDUCED BY AVRRPM1 (PIA1)"," ",{"$nulls":6}," "]
["AT3G23110","AT3G23110.1","receptor like protein 37 (RLP37); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 38 (TAIR:AT3G23120.1); Has 116481 Blast hits to 31282 proteins in 1091 species: Archae - 43; Bacteria - 8551; Metazoa - 25997; Fungi - 1173; Plants - 71485; Viruses - 19; Other Eukaryotes - 9213 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 37 (RLP37)","RECEPTOR LIKE PROTEIN 37 (AtRLP37);EMBRYO DEFECTIVE 2800 (EMB2800);RECEPTOR LIKE PROTEIN 37 (RLP37)"," ",{"$nulls":6}," "]
["AT4G13920","AT4G13920.1","receptor like protein 50 (RLP50); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 47 (TAIR:AT4G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 50 (RLP50)","RECEPTOR LIKE PROTEIN 50 (AtRLP50);RECEPTOR LIKE PROTEIN 50 (RLP50)"," ",{"$nulls":6}," "]
["AT5G63970","AT5G63970.1","Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli.","protein_coding","RING DOMAIN LIGASE 3 (RGLG3)","RING DOMAIN LIGASE 3 (RGLG3)"," ",{"$nulls":6}," "]
["AT5G59090","AT5G59090.1","subtilase 4.12 (SBT4.12); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, nucleus, cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase 4.13 (TAIR:AT5G59120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","SUBTILASE 4.12 (SBT4.12)","SUBTILASE 4.12 (SBT4.12);SUBTILASE 4.12 (ATSBT4.12)"," ",{"$nulls":6}," "]
["AT1G51420","AT1G51420.1","sucrose-phosphatase 1 (SPP1); FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: petal, leaf whorl, root, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: Sucrose-6F-phosphate phosphohydrolase family protein (TAIR:AT2G35840.3); Has 854 Blast hits to 850 proteins in 328 species: Archae - 0; Bacteria - 616; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).","protein_coding","SUCROSE-PHOSPHATASE 1 (SPP1)","SUCROSE-PHOSPHATASE 1 (ATSPP1);SUCROSE-PHOSPHATASE 1 (SPP1)"," ",{"$nulls":6}," "]
["AT5G13550","AT5G13550.1","Encodes a sulfate transporter.","protein_coding","SULFATE TRANSPORTER 4.1 (SULTR4;1)","SULFATE TRANSPORTER 4.1 (SULTR4;1)"," ",{"$nulls":6}," "]
["AT5G06839","AT5G06839.3","bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3).","protein_coding","TGACG (TGA) MOTIF-BINDING PROTEIN 10 (TGA10)","TGACG (TGA) MOTIF-BINDING PROTEIN 10 (TGA10); (bZIP65)"," ",{"$nulls":6}," "]
["AT1G08320","AT1G08320.1","bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 1141 Blast hits to 1141 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 49; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).","protein_coding","TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)"," (bZIP21);TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)"," ",{"$nulls":6}," "]
["AT1G45145","AT1G45145.1","encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","protein_coding","THIOREDOXIN H-TYPE 5 (TRX5)","THIOREDOXIN H-TYPE 5 (ATTRX5);THIOREDOXIN H-TYPE 5 (TRX5);LOCUS OF INSENSITIVITY TO VICTORIN 1 (LIV1);THIOREDOXIN H-TYPE 5 (ATH5)"," ",{"$nulls":6}," "]
["AT2G25810","AT2G25810.1","tonoplast intrinsic protein 4;1 (TIP4;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, membrane, central vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10430 Blast hits to 10407 proteins in 2161 species: Archae - 84; Bacteria - 4945; Metazoa - 1471; Fungi - 406; Plants - 2499; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink).","protein_coding","TONOPLAST INTRINSIC PROTEIN 4;1 (TIP4;1)","TONOPLAST INTRINSIC PROTEIN 4;1 (TIP4;1)"," ",{"$nulls":6}," "]
["AT4G01080","AT4G01080.1","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","protein_coding","TRICHOME BIREFRINGENCE-LIKE 26 (TBL26)","TRICHOME BIREFRINGENCE-LIKE 26 (TBL26)"," ",{"$nulls":6}," "]
["AT2G43510","AT2G43510.1","Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.","protein_coding","TRYPSIN INHIBITOR PROTEIN 1 (TI1)","TRYPSIN INHIBITOR PROTEIN 1 (TI1);TRYPSIN INHIBITOR PROTEIN 1 (ATTI1)"," ",{"$nulls":6}," "]
["AT5G17990","AT5G17990.1","Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase  (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.","protein_coding","TRYPTOPHAN BIOSYNTHESIS 1 (TRP1)","PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1 (pat1);TRYPTOPHAN BIOSYNTHESIS 1 (TRP1)"," ",{"$nulls":6}," "]
["AT1G64200","AT1G64200.1","vacuolar H+-ATPase subunit E isoform 3 (VHA-E3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 792 Blast hits to 792 proteins in 304 species: Archae - 92; Bacteria - 13; Metazoa - 250; Fungi - 149; Plants - 127; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).","protein_coding","VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3 (VHA-E3)","VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3 (VHA-E3)"," ",{"$nulls":6}," "]
["AT2G34940","AT2G34940.1","VACUOLAR SORTING RECEPTOR 5 (VSR5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1); Has 10681 Blast hits to 5483 proteins in 264 species: Archae - 0; Bacteria - 175; Metazoa - 9320; Fungi - 5; Plants - 378; Viruses - 0; Other Eukaryotes - 803 (source: NCBI BLink).","protein_coding","VACUOLAR SORTING RECEPTOR 5 (VSR5)","VACUOLAR SORTING RECEPTOR 5 (VSR5);BINDING PROTEIN OF 80 KDA 3;2 (BP80-3;2);VACUOLAR SORTING RECEPTOR 3;2 (VSR3;2)"," ",{"$nulls":6}," "]
["AT4G20110","AT4G20110.2","VACUOLAR SORTING RECEPTOR 7 (VSR7); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: trans-Golgi network, integral to plasma membrane, Golgi transport complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1).","protein_coding","VACUOLAR SORTING RECEPTOR 7 (VSR7)","VACUOLAR SORTING RECEPTOR 7 (VSR7)"," ",{"$nulls":6}," "]
["AT1G18860","AT1G18860.1","member of WRKY Transcription Factor; Group II-b","protein_coding","WRKY DNA-BINDING PROTEIN 61 (WRKY61)","WRKY DNA-BINDING PROTEIN 61 (WRKY61);WRKY DNA-BINDING PROTEIN 61 (ATWRKY61)"," ",{"$nulls":6}," "]
["AT1G29280","AT1G29280.1","member of WRKY Transcription Factor; Group II-e","protein_coding","WRKY DNA-BINDING PROTEIN 65 (WRKY65)","WRKY DNA-BINDING PROTEIN 65 (ATWRKY65);WRKY DNA-BINDING PROTEIN 65 (WRKY65)"," ",{"$nulls":6}," "]
["AT1G68150","AT1G68150.1","member of WRKY Transcription Factor; Group II-b","protein_coding","WRKY DNA-BINDING PROTEIN 9 (WRKY9)"," (AtWRKY9);WRKY DNA-BINDING PROTEIN 9 (WRKY9)"," ",{"$nulls":6}," "]

{"sheet":"28","index":28,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT4G06740","AT4G06740.1","unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT2G41120","AT2G41120.1","unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G44290","AT5G44290.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G03740.1); Has 122706 Blast hits to 121395 proteins in 4473 species: Archae - 82; Bacteria - 13422; Metazoa - 46349; Fungi - 12470; Plants - 30311; Viruses - 462; Other Eukaryotes - 19610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009626 plant-type hypersensitive response ","P ","3.45e-03 ","11/142 (7.7%) ","406/30324 (1.3%) ","CSLA07 RPP13 RIN4 AT1G08940 AIB SERK4 CAX2 MC1 BAK1 AT5G63490 AT3G19030"," "]
["AT5G37750","AT5G37750.1","Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G37440.1); Has 18162 Blast hits to 18133 proteins in 3068 species: Archae - 123; Bacteria - 7872; Metazoa - 3152; Fungi - 1402; Plants - 1773; Viruses - 8; Other Eukaryotes - 3832 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034050 host programmed cell death induced by symbiont ","P ","3.53e-03 ","11/142 (7.7%) ","407/30324 (1.3%) ","CSLA07 RPP13 RIN4 AT1G08940 AIB SERK4 CAX2 MC1 BAK1 AT5G63490 AT3G19030"," "]
["AT1G25370","AT1G25370.1","Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G68340.1); Has 265 Blast hits to 265 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048583 regulation of response to stimulus ","P ","7.72e-03 ","14/142 (9.9%) ","722/30324 (2.4%) ","CSLA07 RIN4 AT1G08940 MYBR1 AIB SERK4 CAX2 SIB2 MC1 BAK1 AT5G63490 ATSTE14B AT3G19030 AT2G04305"," "]
["AT4G38540","AT4G38540.1","FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G02220","AT5G02220.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT1G47265","AT1G47265.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT3G15350","AT3G15350.1","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G53100.1); Has 959 Blast hits to 959 proteins in 120 species: Archae - 0; Bacteria - 47; Metazoa - 560; Fungi - 0; Plants - 315; Viruses - 14; Other Eukaryotes - 23 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT2G04305","AT2G04305.1","Magnesium transporter CorA-like family protein; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0005886 plasma membrane ","C ","5.24e-03 ","34/142 (23.9%) ","3258/30324 (10.7%) ","AT1G18210 CNGC10 MAKR2 AT2G21500 AT3G57750 RPP13 RAB11c AT2G19440 CIPK8 RIN4 WIH2 PAPP2C AT2G31820 AT1G22510 AT4G36945 PBL1 AT3G46110 KEU AT1G57700 AT3G49720 SERK4 AT5G18310 GONST3 AT1G66780 AT5G50120 CPK5 AT2G28940 SOUL-1 AT4G20840 AT2G39360 AT5G44290 BAK1 AT3G50140 AT2G04305"," "]
["AT5G08760","AT5G08760.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G20460","AT4G20460.1","NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity; INVOLVED IN: galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G30620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","  ",{"$nulls":5}," "]
["AT5G01750","AT5G01750.2","Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G27260","AT2G27260.1","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G52460.1); Has 868 Blast hits to 868 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 862; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G30600","AT4G30600.1","signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G21790","AT3G21790.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G20520","AT1G20520.1","Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT1G76210.1); Has 416 Blast hits to 408 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G33940","AT4G33940.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G00300","AT4G00300.1","fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G57700","AT1G57700.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 118165 Blast hits to 116848 proteins in 3803 species: Archae - 91; Bacteria - 12447; Metazoa - 43256; Fungi - 11995; Plants - 30846; Viruses - 422; Other Eukaryotes - 19108 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G21650","AT3G21650.1","Encodes protein phosphatase 2A (PP2A) B'zeta subunit.  Targeted to mitochondria.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G47550","AT3G47550.3","RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 1874 Blast hits to 1869 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 852; Fungi - 126; Plants - 623; Viruses - 31; Other Eukaryotes - 242 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G13665","AT2G13665.1","Potential natural antisense gene, locus overlaps with AT2G13660","other_rna",null,null," ",{"$nulls":6}," "]
["AT5G44582","AT5G44582.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44580.1); Has 24 Blast hits to 24 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G16800","AT5G16800.3","Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: MEIOTIC CONTROL OF CROSSOVERS1 (TAIR:AT3G02980.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G03495","AT1G03495.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03940.1); Has 1920 Blast hits to 1905 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1900; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G63490","AT5G63490.1","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT5G50530.1); Has 8040 Blast hits to 6478 proteins in 1504 species: Archae - 1004; Bacteria - 5599; Metazoa - 7; Fungi - 119; Plants - 199; Viruses - 0; Other Eukaryotes - 1112 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G30990","AT2G30990.1","Protein of unknown function (DUF688); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 249 Blast hits to 230 proteins in 71 species: Archae - 0; Bacteria - 43; Metazoa - 23; Fungi - 18; Plants - 104; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G25210","AT4G25210.1","DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00130.1); Has 6385 Blast hits to 3618 proteins in 495 species: Archae - 4; Bacteria - 719; Metazoa - 1874; Fungi - 800; Plants - 494; Viruses - 72; Other Eukaryotes - 2422 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G31820","AT2G31820.1","Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G66780","AT1G66780.1","MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G64820.1); Has 9685 Blast hits to 9584 proteins in 1890 species: Archae - 189; Bacteria - 6754; Metazoa - 148; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G59860","AT1G59860.1","HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7002 Blast hits to 7001 proteins in 1594 species: Archae - 206; Bacteria - 4112; Metazoa - 148; Fungi - 313; Plants - 1631; Viruses - 0; Other Eukaryotes - 592 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G03156","AT4G03156.1","small GTPase-related; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G08190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G30240","AT4G30240.1","Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT2G18860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G29195","AT1G29195.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G22510","AT1G22510.2","RING/U-box protein with domain of unknown function (DUF 1232); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G19140","AT4G19140.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G62770","AT5G62770.1","Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G70420.1); Has 173 Blast hits to 173 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G21570","AT4G21570.1","Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G11200.1); Has 836 Blast hits to 835 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 192; Plants - 240; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G26770","AT5G26770.2","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G47080","AT3G47080.1","Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 387 Blast hits to 270 proteins in 35 species: Archae - 8; Bacteria - 81; Metazoa - 0; Fungi - 0; Plants - 274; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G51795","AT5G51795.1","DNA/RNA-binding protein Kin17, conserved region; CONTAINS InterPro DOMAIN/s: DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT1G55460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G04684","AT1G04684.1","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G33040","AT4G33040.1","Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G11930.1); Has 1149 Blast hits to 1147 proteins in 175 species: Archae - 0; Bacteria - 20; Metazoa - 257; Fungi - 124; Plants - 712; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G28940","AT2G28940.2","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G57070","AT3G57070.1","Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G41330.1); Has 1224 Blast hits to 656 proteins in 101 species: Archae - 0; Bacteria - 41; Metazoa - 125; Fungi - 4; Plants - 389; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G32910","AT1G32910.1","HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G78990.1); Has 2266 Blast hits to 2253 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 22; Plants - 2240; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G29510","AT2G29510.1","Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT5G59020.1); Has 3861 Blast hits to 705 proteins in 135 species: Archae - 0; Bacteria - 66; Metazoa - 411; Fungi - 77; Plants - 149; Viruses - 10; Other Eukaryotes - 3148 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G57750","AT3G57750.1","Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 51261 Blast hits to 50836 proteins in 2124 species: Archae - 20; Bacteria - 5135; Metazoa - 13711; Fungi - 2551; Plants - 24631; Viruses - 129; Other Eukaryotes - 5084 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G18210","AT1G18210.1","Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1); Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2; Bacteria - 177; Metazoa - 9876; Fungi - 6429; Plants - 6014; Viruses - 0; Other Eukaryotes - 3910 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G07334","AT4G07334.1","transposable element gene; gypsy-like retrotransposon family (Athila), has a 3.4e-97 P-value blast match to gb|AAL06422.1|AF378081_1 reverse transcriptase (Athila4) (Arabidopsis thaliana) (Gypsy_Ty3-family)","transposable_element_gene",null,null," ",{"$nulls":6}," "]
["AT1G28280","AT1G28280.1","VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G33780.1); Has 240 Blast hits to 231 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 36; Fungi - 32; Plants - 147; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G50120","AT5G50120.1","Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G24130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G15200","AT3G15200.1","Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cytosolic ribosome; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 26696 Blast hits to 9471 proteins in 249 species: Archae - 1; Bacteria - 11; Metazoa - 102; Fungi - 194; Plants - 25787; Viruses - 0; Other Eukaryotes - 601 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G26080","AT3G26080.1","plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 376 Blast hits to 374 proteins in 78 species: Archae - 0; Bacteria - 85; Metazoa - 0; Fungi - 0; Plants - 276; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G13275","AT3G13275.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G50140","AT3G50140.1","Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon, leaf whorl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50190.1); Has 1193 Blast hits to 1065 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1176; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G18295","AT3G18295.1","Protein of unknown function (DUF1639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G48770.1); Has 259 Blast hits to 258 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G03330","AT5G03330.1","Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G04250.2); Has 956 Blast hits to 946 proteins in 179 species: Archae - 0; Bacteria - 4; Metazoa - 388; Fungi - 96; Plants - 262; Viruses - 17; Other Eukaryotes - 189 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G19440","AT2G19440.1","O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G37550","AT5G37550.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G10650","AT1G10650.1","SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 1212 Blast hits to 1212 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 524; Fungi - 0; Plants - 416; Viruses - 105; Other Eukaryotes - 165 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G36945","AT4G36945.1","PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT3G19310.1); Has 486 Blast hits to 483 proteins in 111 species: Archae - 0; Bacteria - 90; Metazoa - 8; Fungi - 169; Plants - 156; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G18310","AT5G18310.2","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G52950","AT3G52950.1","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1); Has 6963 Blast hits to 5172 proteins in 1360 species: Archae - 807; Bacteria - 5016; Metazoa - 6; Fungi - 130; Plants - 259; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G26350","AT4G26350.1","F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G26340.1); Has 1865 Blast hits to 1805 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 1848; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G08940","AT1G08940.1","Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G35500","AT4G35500.2","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17530.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G53330","AT1G53330.1","encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes.","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G20840","AT4G20840.1","FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445 proteins in 696 species: Archae - 38; Bacteria - 1910; Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G07380","AT3G07380.1","Domain of unknown function (DUF23); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G48190.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G06760","AT3G06760.2","Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G49230.1); Has 224 Blast hits to 224 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G13390","AT1G13390.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G10990","AT1G10990.2","unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G38545","AT4G38545.1","Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540","other_rna",null,null," ",{"$nulls":6}," "]
["AT2G21500","AT2G21500.2","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G39140.5); Has 279 Blast hits to 254 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 31; Plants - 177; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G02770","AT3G02770.1","Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; FUNCTIONS IN: ribonuclease inhibitor activity; INVOLVED IN: regulation of RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (InterPro:IPR005493), Ribonuclease E inhibitor RraA (InterPro:IPR010203); BEST Arabidopsis thaliana protein match is: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase (TAIR:AT5G16450.2); Has 3340 Blast hits to 3340 proteins in 1050 species: Archae - 84; Bacteria - 2632; Metazoa - 2; Fungi - 51; Plants - 104; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G13760","AT1G13760.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G53110","AT5G53110.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G77250","AT1G77250.1","RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G62460","AT5G62460.1","RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G47550.6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G02970","AT5G02970.1","alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G09690.2); Has 911 Blast hits to 905 proteins in 207 species: Archae - 6; Bacteria - 480; Metazoa - 9; Fungi - 40; Plants - 329; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G05140","AT5G05140.1","Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G19030","AT3G19030.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxine biosynthetic process, homoserine biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT2G39360","AT2G39360.1","Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 117164 Blast hits to 115761 proteins in 4506 species: Archae - 99; Bacteria - 13343; Metazoa - 43886; Fungi - 9766; Plants - 32814; Viruses - 370; Other Eukaryotes - 16886 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G34480","AT4G34480.1","O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G16230.1); Has 576 Blast hits to 566 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 570; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G49280","AT5G49280.1","hydroxyproline-rich glycoprotein family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G49720","AT3G49720.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G34270","AT1G34270.1","Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1266 Blast hits to 1263 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 4; Plants - 1015; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G45276","AT5G45276.1","unknown pseudogene","pseudogene",null,null," ",{"$nulls":6}," "]
["AT1G78070","AT1G78070.1","Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G36070.1); Has 25796 Blast hits to 12397 proteins in 585 species: Archae - 64; Bacteria - 7254; Metazoa - 7661; Fungi - 5235; Plants - 2447; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G46110","AT3G46110.1","LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 195 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT1G07500","AT1G07500.1","unknown protein; Has 4 Blast hits to 4 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT3G14870","AT3G14870.1","Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G53380.3); Has 436 Blast hits to 433 proteins in 67 species: Archae - 9; Bacteria - 8; Metazoa - 66; Fungi - 13; Plants - 283; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G10970","AT4G10970.6","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 72 Blast hits to 50 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT5G56340","AT5G56340.1","ATCRT1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding"," (ATCRT1)"," (ATCRT1)"," ",{"$nulls":6}," "]
["AT5G08335","AT5G08335.1","Encodes an  isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.","protein_coding"," (ATSTE14B)"," (ATSTE14B);ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B (ATICMTB);ISOPRENYL CYSTEINE METHYLTRANSFERASE B (ICMTB)"," ",{"$nulls":6}," "]
["AT2G37970","AT2G37970.1","SOUL-1; FUNCTIONS IN: binding; INVOLVED IN: N-terminal protein myristoylation, red or far-red light signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1); Has 1375 Blast hits to 1375 proteins in 156 species: Archae - 18; Bacteria - 186; Metazoa - 71; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink).","protein_coding"," (SOUL-1)"," (SOUL-1)"," ",{"$nulls":6}," "]
["AT1G73030","AT1G73030.1","Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730.  CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development.  ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.","protein_coding"," (VPS46.2)","CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING  PROTEIN1A (CHMP1A); (VPS46.2)"," ",{"$nulls":6}," "]
["AT3G48320","AT3G48320.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 21 (CYP71A21)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 21 (CYP71A21)"," ",{"$nulls":6}," "]
["AT3G14660","AT3G14660.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 13 (CYP72A13)","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 13 (CYP72A13)"," ",{"$nulls":6}," "]
["AT1G04220","AT1G04220.1","Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","protein_coding","3-KETOACYL-COA SYNTHASE 2 (KCS2)","3-KETOACYL-COA SYNTHASE 2 (KCS2)"," ",{"$nulls":6}," "]
["AT2G46510","AT2G46510.1","Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.","protein_coding","ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (AIB)","ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (AIB);ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (ATAIB)"," ",{"$nulls":6}," "]
["AT1G32150","AT1G32150.1","Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1.  The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","protein_coding","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68)"," (AtbZIP68);BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68)"," ",{"$nulls":6}," "]
["AT4G33430","AT4G33430.2","Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1  and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.","protein_coding","BRI1-ASSOCIATED RECEPTOR KINASE (BAK1)","BRI1-ASSOCIATED RECEPTOR KINASE (BAK1)"," ",{"$nulls":6}," "]
["AT4G00330","AT4G00330.1","high overall homology to CRCK1","protein_coding","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (CRCK2)","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (CRCK2)"," ",{"$nulls":6}," "]
["AT4G35310","AT4G35310.1","calmodulin-domain protein kinase CDPK isoform 5 (CPK5)","protein_coding","CALMODULIN-DOMAIN PROTEIN KINASE 5 (CPK5)"," (ATCPK5);CALMODULIN-DOMAIN PROTEIN KINASE 5 (CPK5)"," ",{"$nulls":6}," "]
["AT5G57015","AT5G57015.1","casein kinase I-like 12 (ckl12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding","CASEIN KINASE I-LIKE 12 (ckl12)","CASEIN KINASE I-LIKE 12 (ckl12)"," ",{"$nulls":6}," "]
["AT3G13320","AT3G13320.1","low affinity calcium antiporter CAX2","protein_coding","CATION EXCHANGER 2 (CAX2)","CATION EXCHANGER 2 (CAX2); (atcax2)"," ",{"$nulls":6}," "]
["AT4G24400","AT4G24400.1","Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.","protein_coding","CBL-INTERACTING PROTEIN KINASE 8 (CIPK8)","CBL-INTERACTING PROTEIN KINASE 8 (CIPK8); (ATCIPK8);PROTEIN KINASE 11 (PKS11);SNF1-RELATED PROTEIN KINASE 3.13 (SnRK3.13)"," ",{"$nulls":6}," "]
["AT2G35650","AT2G35650.1","a member of Glycosyltransferase- Family 2 and encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. Mutants exhibit defects in pollen tube growth and embryo development. The defective embryonic development was associated with reduced proliferation and failed cellularization of the endosperm.","protein_coding","CELLULOSE SYNTHASE LIKE (CSLA07)","CELLULOSE SYNTHASE LIKE (CSLA07);CELLULOSE SYNTHASE LIKE A7 (CSLA7);CELLULOSE SYNTHASE LIKE (ATCSLA07); (CSLA07); (ATCSLA7)"," ",{"$nulls":6}," "]
["AT2G31955","AT2G31955.1","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.","protein_coding","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2 (CNX2)","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2 (CNX2)"," ",{"$nulls":6}," "]
["AT1G01340","AT1G01340.2","member of Cyclic nucleotide gated channel family","protein_coding","CYCLIC NUCLEOTIDE GATED CHANNEL 10 (CNGC10)","CYCLIC NUCLEOTIDE GATED CHANNEL 10 (CNGC10)"," ",{"$nulls":6}," "]
["AT4G10040","AT4G10040.1","Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.","protein_coding","CYTOCHROME C-2 (CYTC-2)","CYTOCHROME C-2 (CYTC-2)"," ",{"$nulls":6}," "]
["AT5G02200","AT5G02200.2","Encodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA.","protein_coding","FAR-RED-ELONGATED HYPOCOTYL1-LIKE (FHL)","FAR-RED-ELONGATED HYPOCOTYL1-LIKE (FHL)"," ",{"$nulls":6}," "]
["AT1G06130","AT1G06130.1","glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, zinc ion binding, hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.1); Has 15456 Blast hits to 15455 proteins in 2500 species: Archae - 395; Bacteria - 9969; Metazoa - 478; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink).","protein_coding","GLYOXALASE 2-4 (GLX2-4)","GLYOXALASE 2-4 (GLX2-4)"," ",{"$nulls":6}," "]
["AT1G76340","AT1G76340.1","Encodes a nucleotide-sugar transporter.","protein_coding","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 (GONST3)","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 (GONST3)"," ",{"$nulls":6}," "]
["AT5G64300","AT5G64300.1","encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively","protein_coding","GTP CYCLOHYDROLASE II (GCH)","ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II (ATGCH);RIBOFLAVIN A1 (RIBA1);ARABIDOPSIS THALIANA RIBOFLAVIN A1 (ATRIBA1);RED FLUORESCENT IN DARKNESS 1 (RFD1);GTP CYCLOHYDROLASE II (GCH)"," ",{"$nulls":6}," "]
["AT3G50480","AT3G50480.1","Homolog of RPW8","protein_coding","HOMOLOG OF RPW8 4 (HR4)","HOMOLOG OF RPW8 4 (HR4)"," ",{"$nulls":6}," "]
["AT1G12360","AT1G12360.1","encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis.","protein_coding","KEULE (KEU)","KEULE (KEU)"," ",{"$nulls":6}," "]
["AT1G64080","AT1G64080.1","Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR)  gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6).","protein_coding","MEMBRANE-ASSOCIATED KINASE REGULATOR 2 (MAKR2)","MEMBRANE-ASSOCIATED KINASE REGULATOR 2 (MAKR2)"," ",{"$nulls":6}," "]
["AT1G02170","AT1G02170.1","Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2)  antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues.  A third type I Arabidopsis metacaspase is MC3 (AT5g64240).","protein_coding","METACASPASE 1 (MC1)","LSD ONE LIKE 3 (LOL3);ARABIDOPSIS THALIANA METACASPASE 1B (ATMCPB1);METACASPASE 1B (MCP1b);METACASPASE 1 (AMC1);ARABIDOPSIS THALIANA METACASPASE 1 (ATMC1);METACASPASE 1 (MC1);METACASPASE 1B (AtMCP1b)"," ",{"$nulls":6}," "]
["AT1G06140","AT1G06140.1","Encodes MEF3 (mitochondrial editing factor 3), a PPR (pentatricopeptide repeat) protein of the E domain subclass. Functions in mitochondrial RNA editing.","protein_coding","MITOCHONDRIAL EDITING FACTOR 3 (MEF3)","MITOCHONDRIAL EDITING FACTOR 3 (MEF3)"," ",{"$nulls":6}," "]
["AT2G43290","AT2G43290.1","Encodes calmodulin-like MSS3.","protein_coding","MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3 (MSS3)","MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3 (MSS3)"," ",{"$nulls":6}," "]
["AT3G51160","AT3G51160.1","Catalyzes the first step in the de novo synthesis of GDP-L-fucose.","protein_coding","MURUS 1 (MUR1)","MURUS 1 (MUR1);GDP-D-MANNOSE-4,6-DEHYDRATASE 2 (GMD2);MURUS 1 (MUR_1)"," ",{"$nulls":6}," "]
["AT5G67300","AT5G67300.1","Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.","protein_coding","MYB DOMAIN PROTEIN R1 (MYBR1)"," (ATMYBR1); (MYB44);MYB DOMAIN PROTEIN R1 (MYBR1);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44 (ATMYB44)"," ",{"$nulls":6}," "]
["AT5G63790","AT5G63790.1","Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings.","protein_coding","NAC DOMAIN CONTAINING PROTEIN 102 (NAC102)","NAC DOMAIN CONTAINING PROTEIN 102 (ANAC102);NAC DOMAIN CONTAINING PROTEIN 102 (NAC102)"," ",{"$nulls":6}," "]
["AT5G62380","AT5G62380.1","Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.","protein_coding","NAC-DOMAIN PROTEIN 101 (NAC101)","NAC-DOMAIN PROTEIN 101 (NAC101);NAC-DOMAIN PROTEIN 101 (ANAC101);VASCULAR-RELATED NAC-DOMAIN 6 (VND6)"," ",{"$nulls":6}," "]
["AT3G55450","AT3G55450.2","PBS1-like 1 (PBL1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: botrytis-induced kinase1 (TAIR:AT2G39660.1).","protein_coding","PBS1-LIKE 1 (PBL1)","PBS1-LIKE 1 (PBL1)"," ",{"$nulls":6}," "]
["AT1G12580","AT1G12580.1","phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink).","protein_coding","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 1 (PEPKR1)","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 1 (PEPKR1)"," ",{"$nulls":6}," "]
["AT1G22280","AT1G22280.3","Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C).  PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB.  Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.","protein_coding","PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C (PAPP2C)","PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C (PAPP2C)"," ",{"$nulls":6}," "]
["AT5G05850","AT5G05850.1","Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.","protein_coding","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 1 (PIRL1)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 1 (PIRL1)"," ",{"$nulls":6}," "]
["AT4G36650","AT4G36650.1","Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.","protein_coding","PLANT-SPECIFIC TFIIB-RELATED PROTEIN (PBRP)","PLANT-SPECIFIC TFIIB-RELATED PROTEIN (PBRP);PLANT-SPECIFIC TFIIB-RELATED PROTEIN (ATPBRP)"," ",{"$nulls":6}," "]
["AT5G56230","AT5G56230.1","prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","PRENYLATED RAB ACCEPTOR 1.G2 (PRA1.G2)","PRENYLATED RAB ACCEPTOR 1.G2 (PRA1.G2)"," ",{"$nulls":6}," "]
["AT5G15860","AT5G15860.1","Encodes a protein with prenylcysteine methylesterase activity.","protein_coding","PRENYLCYSTEINE METHYLESTERASE (PCME)","PRENYLCYSTEINE METHYLESTERASE (ATPCME);ISOPRENYLCYSTEINE METHYLESTERASE (ICME);PRENYLCYSTEINE METHYLESTERASE (PCME)"," ",{"$nulls":6}," "]
["AT1G09630","AT1G09630.1","Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate.","protein_coding","RAB GTPASE 11C (RAB11c)","ARABIDOPSIS RAB GTPASE A2A (ATRABA2A);ARABIDOPSIS RAB GTPASE A2A (ATRAB-A2A);RAB GTPASE A2A (RAB-A2A);RAB GTPASE 11C (ATRAB11C);RAB GTPASE 11C (RAB11c)"," ",{"$nulls":6}," "]
["AT3G46530","AT3G46530.1","Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.","protein_coding","RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)","RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)"," ",{"$nulls":6}," "]
["AT1G68840","AT1G68840.1","Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)","protein_coding","RELATED TO ABI3/VP1 2 (RAV2)","RELATED TO ABI3/VP1 2 (RAV2);RELATED TO AP2 8 (rap2.8);TEMPRANILLO 2 (TEM2);ETHYLENE RESPONSE DNA BINDING FACTOR 2 (EDF2); (AtRAV2)"," ",{"$nulls":6}," "]
["AT3G25070","AT3G25070.1","Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved  by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the  plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.","protein_coding","RPM1 INTERACTING PROTEIN 4 (RIN4)","RPM1 INTERACTING PROTEIN 4 (RIN4)"," ",{"$nulls":6}," "]
["AT4G35590","AT4G35590.1","RWP-RK domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT5G66990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","RWP-RK DOMAIN-CONTAINING 5 (RKD5)","RWP-RK DOMAIN-CONTAINING 5 (RKD5)"," ",{"$nulls":6}," "]
["AT2G41180","AT2G41180.1","VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: sigma factor binding protein 1 (TAIR:AT3G56710.1); Has 49 Blast hits to 49 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","SIGMA FACTOR BINDING PROTEIN 2 (SIB2)","SIGMA FACTOR BINDING PROTEIN 2 (SIB2)"," ",{"$nulls":6}," "]
["AT2G13790","AT2G13790.1","somatic embryogenesis receptor-like kinase 4 (SERK4); FUNCTIONS IN: protein kinase activity, transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: rosette leaf, cauline leaf, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 5 (TAIR:AT2G13800.1); Has 172318 Blast hits to 120437 proteins in 4454 species: Archae - 129; Bacteria - 14524; Metazoa - 44355; Fungi - 9158; Plants - 84468; Viruses - 411; Other Eukaryotes - 19273 (source: NCBI BLink).","protein_coding","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (ATSERK4);BRI1-  ASSOCIATED KINASE 7 (BAK7);BAK1-LIKE 1 (BKK1);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4)"," ",{"$nulls":6}," "]
["AT2G41630","AT2G41630.1","Encodes the transcription factor TFIIB.","protein_coding","TRANSCRIPTION FACTOR IIB (TFIIB)","TRANSCRIPTION FACTOR IIB (TFIIB)"," ",{"$nulls":6}," "]
["AT1G05680","AT1G05680.1","Encodes a UDP-glucosyltransferase, UGT74E2,  that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","protein_coding","URIDINE DIPHOSPHATE GLYCOSYLTRANSFERASE 74E2 (UGT74E2)","URIDINE DIPHOSPHATE GLYCOSYLTRANSFERASE 74E2 (UGT74E2)"," ",{"$nulls":6}," "]
["AT2G41420","AT2G41420.1","proline-rich family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 12775 Blast hits to 6141 proteins in 617 species: Archae - 8; Bacteria - 1509; Metazoa - 4530; Fungi - 1572; Plants - 2511; Viruses - 428; Other Eukaryotes - 2217 (source: NCBI BLink).","protein_coding","WINDHOSE 2 (WIH2)","WINDHOSE 2 (WIH2)"," ",{"$nulls":6}," "]
["AT4G32540","AT4G32540.1","Mutant has elevated levels of free IAA in dominant mutant allele; Flavin Monooxygenase-Like Enzyme; Auxin Biosynthesis","protein_coding","YUCCA 1 (YUC1)","YUCCA (YUC);YUCCA 1 (YUC1)"," ",{"$nulls":6}," "]
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{"sheet":"29","index":29,"n_rows":194,"n_cols":15,"rows_kept":194,"flags":["formulas_cached_only"]}
["Source: TAIR database (http://www.arabidopsis.org/tools/bulk/genes/index.jsp)",{"$nulls":5}," ","Source: AmiGO (http://amigo.geneontology.org/cgi-bin/amigo/term_enrichment?session_id=)",{"$nulls":5}," ","Source: ATTED2 (http://atted.jp/top_draw.shtml#NetworkDrawer)"]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"," ","GO Term Enrichment",{"$nulls":5}," ","ATTED2 Co-expression network"]
["AT3G50190","AT3G50190.1","Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50140.1); Has 1131 Blast hits to 1013 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1129; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","Biological Process",{"$nulls":5}," "]
["AT4G34180","AT4G34180.1","Cyclase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative cyclase (InterPro:IPR007325); BEST Arabidopsis thaliana protein match is: Cyclase family protein (TAIR:AT1G44542.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT5G66480","AT5G66480.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010200 response to chitin ","P ","3.73e-11 ","20/151 (13.2%) ","422/30324 (1.4%) ","WRKY17 CNBT1 SRO5 Kin3 ZF3 AT3G02880 ARR7 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 AT5G61560 LYK4 AT1G76970 VPS60.1 AT4G33920 AT5G48655 AGB1 ATL9 AT5G59450"," "]
["AT3G13430","AT3G13430.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 9891 Blast hits to 9858 proteins in 281 species: Archae - 0; Bacteria - 11; Metazoa - 2611; Fungi - 953; Plants - 4922; Viruses - 39; Other Eukaryotes - 1355 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010243 response to organonitrogen compound ","P ","7.48e-11 ","20/151 (13.2%) ","438/30324 (1.4%) ","WRKY17 CNBT1 SRO5 Kin3 ZF3 AT3G02880 ARR7 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 AT5G61560 LYK4 AT1G76970 VPS60.1 AT4G33920 AT5G48655 AGB1 ATL9 AT5G59450"," "]
["AT5G41400","AT5G41400.1","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007165 signal transduction ","P ","1.16e-10 ","35/151 (23.2%) ","1618/30324 (5.3%) ","CRLK2 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 RLP3 CST CAM9 AT3G02880 ARR7 AT3G26910 AT1G64710 LSD1 PFA-DSP1 AT3G04640 AT1G67510 PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1"," "]
["AT4G08555","AT4G08555.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044700 single organism signaling ","P ","6.02e-10 ","35/151 (23.2%) ","1713/30324 (5.6%) ","CRLK2 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 RLP3 CST CAM9 AT3G02880 ARR7 AT3G26910 AT1G64710 LSD1 PFA-DSP1 AT3G04640 AT1G67510 PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1"," "]
["AT2G41905","AT2G41905.1","BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0023052 signaling ","P ","6.12e-10 ","35/151 (23.2%) ","1714/30324 (5.7%) ","CRLK2 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 RLP3 CST CAM9 AT3G02880 ARR7 AT3G26910 AT1G64710 LSD1 PFA-DSP1 AT3G04640 AT1G67510 PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1"," "]
["AT3G53810","AT3G53810.1","Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: receptor lectin kinase (TAIR:AT2G37710.1); Has 115173 Blast hits to 113727 proteins in 4497 species: Archae - 97; Bacteria - 13623; Metazoa - 41795; Fungi - 9670; Plants - 33434; Viruses - 433; Other Eukaryotes - 16121 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051716 cellular response to stimulus ","P ","7.45e-10 ","45/151 (29.8%) ","2811/30324 (9.3%) ","CRLK2 PDX1.2 CNBT1 BRL3 AT3G28450 AT1G51840 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 RLP3 AT5G46780 CST CAM9 AT3G02880 SGT1A ARR7 AT3G26910 AT1G64710 AT5G41400 LSD1 PFA-DSP1 AT3G53810 AT3G04640 AT1G67510 PUB17 ATRAD17 PI4K GAMMA 4 RPK1 AT5G61560 LYK4 AT2G27500 AT1G17860 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1"," "]
["AT1G17860","AT1G17860.1","Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: kunitz trypsin inhibitor 1 (TAIR:AT1G73260.1); Has 1019 Blast hits to 1019 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006952 defense response ","P ","1.45e-09 ","34/151 (22.5%) ","1667/30324 (5.5%) ","CRLK2 WRKY17 CNBT1 IP5PII Kin3 AT5G46780 CST CAM9 AT3G02880 SGT1A AT3G26910 AT1G63740 AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT5G40910 AT2G27500 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 CRK19 AGB1 CBL1 PARVUS ATL9 AT1G15890"," "]
["AT2G17705","AT2G17705.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08330.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 5; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901698 response to nitrogen compound ","P ","1.46e-09 ","24/151 (15.9%) ","792/30324 (2.6%) ","WRKY17 CNBT1 SRO5 AT1G51840 AGP2 Kin3 ZF3 AT3G02880 ARR7 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 AT5G61560 LYK4 AT1G17860 AT1G76970 VPS60.1 AT4G33920 AT5G48655 CRK19 AGB1 ATL9 AT5G59450"," "]
["AT5G48655","AT5G48655.2","RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0002376 immune system process ","P ","9.74e-09 ","26/151 (17.2%) ","1032/30324 (3.4%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 AT3G02880 SGT1A AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT2G27500 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G64710","AT1G64710.1","GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 32712 Blast hits to 32690 proteins in 3136 species: Archae - 724; Bacteria - 20870; Metazoa - 1276; Fungi - 2315; Plants - 4127; Viruses - 3; Other Eukaryotes - 3397 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009626 plant-type hypersensitive response ","P ","2.42e-08 ","17/151 (11.3%) ","406/30324 (1.3%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G53110","AT1G53110.1","BEST Arabidopsis thaliana protein match is: proton pump interactor 2 (TAIR:AT3G15340.1); Has 9980 Blast hits to 7312 proteins in 825 species: Archae - 146; Bacteria - 1301; Metazoa - 3338; Fungi - 830; Plants - 588; Viruses - 42; Other Eukaryotes - 3735 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034050 host programmed cell death induced by symbiont ","P ","2.52e-08 ","17/151 (11.3%) ","407/30324 (1.3%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT4G11300","AT4G11300.1","CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G23530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071310 cellular response to organic substance ","P ","2.71e-08 ","28/151 (18.5%) ","1261/30324 (4.2%) ","CRLK2 CNBT1 AT3G28450 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 CST SGT1A ARR7 AT3G26910 AT1G64710 LSD1 AT3G04640 PI4K GAMMA 4 RPK1 AT5G61560 LYK4 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT2G43590","AT2G43590.1","Chitinase family protein; FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43580.1); Has 2744 Blast hits to 2502 proteins in 524 species: Archae - 0; Bacteria - 615; Metazoa - 34; Fungi - 202; Plants - 1760; Viruses - 20; Other Eukaryotes - 113 (source: NCBI BLink).","protein_coding",null,null," ","GO:0007154 cell communication ","P ","2.84e-08 ","36/151 (23.8%) ","2073/30324 (6.8%) ","CRLK2 CNBT1 BRL3 AT3G28450 AT1G51840 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 RLP3 CST CAM9 AT3G02880 ARR7 AT3G26910 AT1G64710 LSD1 PFA-DSP1 AT3G04640 AT1G67510 PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1"," "]
["AT1G20520","AT1G20520.1","Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT1G76210.1); Has 416 Blast hits to 408 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045087 innate immune response ","P ","2.88e-08 ","24/151 (15.9%) ","914/30324 (3.0%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 SGT1A AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 CRCK1 RPK1 LYK4 AT2G27500 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G67510","AT1G67510.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 143953 Blast hits to 102465 proteins in 3529 species: Archae - 126; Bacteria - 14252; Metazoa - 36189; Fungi - 7617; Plants - 70099; Viruses - 200; Other Eukaryotes - 15470 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006955 immune response ","P ","3.29e-08 ","24/151 (15.9%) ","920/30324 (3.0%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 SGT1A AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 CRCK1 RPK1 LYK4 AT2G27500 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT4G33920","AT4G33920.1","Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: mitochondrion, protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 5306 Blast hits to 5302 proteins in 304 species: Archae - 0; Bacteria - 42; Metazoa - 1364; Fungi - 564; Plants - 2405; Viruses - 3; Other Eukaryotes - 928 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009719 response to endogenous stimulus ","P ","3.82e-08 ","34/151 (22.5%) ","1879/30324 (6.2%) ","WRKY17 CNBT1 SRO5 ERF8 IP5PII UGT71B6 Kin3 ZF3 CST CAM9 AT3G02880 SGT1A ARR7 AT1G64710 LSD1 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AT5G48655 AT3G08030 AGB1 CBL1 PARVUS ATL9 AT5G59450"," "]
["AT1G18382","AT1G18382.1","Potential natural antisense gene, locus overlaps with AT1G18380","other_rna",null,null," ","GO:0010033 response to organic substance ","P ","4.71e-08 ","42/151 (27.8%) ","2805/30324 (9.3%) ","CRLK2 WRKY17 CNBT1 BRL3 SRO5 AT3G28450 ERF8 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 CST CAM9 AT3G02880 SGT1A ARR7 AT3G26910 AT1G64710 LSD1 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT5G48655 CRK19 AT3G08030 AGB1 CBL1 PARVUS AT1G03740 ATL9 AT5G59450"," "]
["AT3G03855","AT3G03855.1","pseudogene of disease resistance protein","pseudogene",null,null," ","GO:0050896 response to stimulus ","P ","5.78e-08 ","69/151 (45.7%) ","6619/30324 (21.8%) ","CRLK2 PDX1.2 AT1G03010 WRKY17 CNBT1 BRL3 SRO5 AT3G28450 AT1G51840 AT5G12940 CIPK2 ERF8 AGP2 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 RLP3 AT5G59070 AT5G46780 CST CAM9 AT3G02880 SGT1A ARR7 CBF1 AT3G26910 AT1G63740 AT1G64710 AGP20 AT5G41400 AT4G34180 LSD1 PFA-DSP1 AT2G43320 AT3G53810 AT3G04640 AT1G67510 PUB17 ATRAD17 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT5G40910 AT2G27500 AT1G17860 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 AT5G48655 CSLD2 CRK19 AT3G08030 AGB1 CBL1 PARVUS AT1G03740 AT4G36010 ATL9 SHB1 AT1G15890 AT5G59450 JMJ18"," "]
["AT1G49390","AT1G49390.1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G20400.1); Has 8311 Blast hits to 8257 proteins in 975 species: Archae - 0; Bacteria - 1039; Metazoa - 114; Fungi - 941; Plants - 4923; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink).","protein_coding",null,null," ","GO:0048583 regulation of response to stimulus ","P ","8.79e-08 ","21/151 (13.9%) ","722/30324 (2.4%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 SGT1A AT5G41400 LSD1 PFA-DSP1 AT3G53810 ATRAD17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G66910","AT1G66910.1","Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080134 regulation of response to stress ","P ","9.10e-08 ","19/151 (12.6%) ","576/30324 (1.9%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 SGT1A AT5G41400 AT3G53810 ATRAD17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G53440","AT1G53440.1","Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190921 Blast hits to 136069 proteins in 4848 species: Archae - 114; Bacteria - 18757; Metazoa - 52699; Fungi - 11122; Plants - 85531; Viruses - 458; Other Eukaryotes - 22240 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006950 response to stress ","P ","9.20e-08 ","51/151 (33.8%) ","4028/30324 (13.3%) ","CRLK2 PDX1.2 WRKY17 CNBT1 SRO5 AT3G28450 AT1G51840 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 AT5G59070 AT5G46780 CST CAM9 AT3G02880 SGT1A CBF1 AT3G26910 AT1G63740 AT5G41400 AT4G34180 LSD1 AT2G43320 AT3G53810 AT3G04640 PUB17 ATRAD17 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT5G40910 AT2G27500 AT1G17860 AT1G76970 RPP1 VPS60.1 CPK27 AT4G33920 CSLD2 CRK19 AGB1 CBL1 PARVUS ATL9 SHB1 AT1G15890"," "]
["AT1G11960","AT1G11960.1","ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G62320.1); Has 1452 Blast hits to 1271 proteins in 185 species: Archae - 0; Bacteria - 4; Metazoa - 184; Fungi - 702; Plants - 435; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).","protein_coding",null,null," ","GO:0080135 regulation of cellular response to stress ","P ","1.16e-07 ","16/151 (10.6%) ","387/30324 (1.3%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 ATRAD17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT3G04640","AT3G04640.1","glycine-rich protein; Has 42937 Blast hits to 13549 proteins in 1124 species: Archae - 42; Bacteria - 16604; Metazoa - 12821; Fungi - 2296; Plants - 5249; Viruses - 609; Other Eukaryotes - 5316 (source: NCBI BLink).","protein_coding",null,null," ","GO:0012501 programmed cell death ","P ","1.68e-07 ","17/151 (11.3%) ","460/30324 (1.5%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT5G12940","AT5G12940.1","Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0030968 endoplasmic reticulum unfolded protein response ","P ","1.77e-07 ","12/151 (7.9%) ","186/30324 (0.6%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT1G76970","AT1G76970.1","Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G21380.1); Has 1693 Blast hits to 1685 proteins in 202 species: Archae - 0; Bacteria - 2; Metazoa - 883; Fungi - 448; Plants - 280; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043067 regulation of programmed cell death ","P ","1.82e-07 ","16/151 (10.6%) ","399/30324 (1.3%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT5G56980","AT5G56980.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035967 cellular response to topologically incorrect protein ","P ","2.00e-07 ","12/151 (7.9%) ","188/30324 (0.6%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT2G36180","AT2G36180.1","EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G17470.1); Has 21321 Blast hits to 13677 proteins in 1405 species: Archae - 0; Bacteria - 118; Metazoa - 8050; Fungi - 4126; Plants - 5854; Viruses - 0; Other Eukaryotes - 3173 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034620 cellular response to unfolded protein ","P ","2.00e-07 ","12/151 (7.9%) ","188/30324 (0.6%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT1G20300","AT1G20300.1","Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 44443 Blast hits to 14229 proteins in 312 species: Archae - 5; Bacteria - 69; Metazoa - 601; Fungi - 771; Plants - 41531; Viruses - 0; Other Eukaryotes - 1466 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006986 response to unfolded protein ","P ","2.00e-07 ","12/151 (7.9%) ","188/30324 (0.6%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT5G40910","AT5G40910.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901700 response to oxygen-containing compound ","P ","2.10e-07 ","38/151 (25.2%) ","2459/30324 (8.1%) ","PDX1.2 WRKY17 CNBT1 SRO5 AT1G51840 AGP2 IP5PII UGT71B6 Kin3 ZF3 CST CAM9 AT3G02880 ARR7 CBF1 LSD1 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT2G27500 AT1G17860 AT1G76970 VPS60.1 CPK27 AT4G33920 AT5G48655 CRK19 AT3G08030 AGB1 CBL1 PARVUS ATL9 AT5G59450"," "]
["AT2G27500","AT2G27500.1","Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 2143 Blast hits to 2127 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 12; Plants - 2120; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010941 regulation of cell death ","P ","2.43e-07 ","16/151 (10.6%) ","407/30324 (1.3%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT3G52710","AT3G52710.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006984 ER-nucleus signaling pathway ","P ","2.87e-07 ","12/151 (7.9%) ","194/30324 (0.6%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT3G20590","AT3G20590.1","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G20600.1); Has 472 Blast hits to 472 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 472; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031347 regulation of defense response ","P ","3.24e-07 ","18/151 (11.9%) ","549/30324 (1.8%) ","CRLK2 CNBT1 Kin3 AT5G46780 CST CAM9 SGT1A AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT5G59070","AT5G59070.1","UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0042221 response to chemical stimulus ","P ","4.13e-07 ","48/151 (31.8%) ","3789/30324 (12.5%) ","CRLK2 PDX1.2 WRKY17 CNBT1 BRL3 SRO5 AT3G28450 AT1G51840 ERF8 AGP2 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 CST CAM9 AT3G02880 SGT1A ARR7 CBF1 AT3G26910 AT1G64710 AT4G34180 LSD1 AT2G43320 AT3G04640 AT-HSFB2B PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT2G27500 AT1G17860 AT1G76970 VPS60.1 CPK27 AT4G33920 AT5G48655 CRK19 AT3G08030 AGB1 CBL1 PARVUS AT1G03740 ATL9 AT5G59450"," "]
["AT1G03740","AT1G03740.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G44290.4); Has 123601 Blast hits to 122225 proteins in 4475 species: Archae - 82; Bacteria - 13399; Metazoa - 46732; Fungi - 12742; Plants - 30380; Viruses - 449; Other Eukaryotes - 19817 (source: NCBI BLink).","protein_coding",null,null," ","GO:0045088 regulation of innate immune response ","P ","4.56e-07 ","16/151 (10.6%) ","425/30324 (1.4%) ","CRLK2 CNBT1 AT5G46780 CST SGT1A AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G11200","AT1G11200.1","Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G21570.1); Has 839 Blast hits to 837 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 195; Plants - 241; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050776 regulation of immune response ","P ","4.88e-07 ","16/151 (10.6%) ","427/30324 (1.4%) ","CRLK2 CNBT1 AT5G46780 CST SGT1A AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT2G35637","AT2G35637.1","Potential natural antisense gene, locus overlaps with AT2G35640","other_rna",null,null," ","GO:0002682 regulation of immune system process ","P ","5.40e-07 ","16/151 (10.6%) ","430/30324 (1.4%) ","CRLK2 CNBT1 AT5G46780 CST SGT1A AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT5G11970","AT5G11970.1","Protein of unknown function (DUF3511); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT2G19460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0070887 cellular response to chemical stimulus ","P ","6.03e-07 ","28/151 (18.5%) ","1445/30324 (4.8%) ","CRLK2 CNBT1 AT3G28450 ERF8 IP5PII UGT71B6 Kin3 AT3G13430 CST SGT1A ARR7 AT3G26910 AT1G64710 LSD1 AT3G04640 PI4K GAMMA 4 RPK1 AT5G61560 LYK4 AT2G27500 AT1G76970 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT1G63740","AT1G63740.1","Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63730.1); Has 16502 Blast hits to 13158 proteins in 513 species: Archae - 4; Bacteria - 732; Metazoa - 493; Fungi - 36; Plants - 15002; Viruses - 2; Other Eukaryotes - 233 (source: NCBI BLink).","protein_coding",null,null," ","GO:0010363 regulation of plant-type hypersensitive response ","P ","6.68e-07 ","15/151 (9.9%) ","373/30324 (1.2%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT2G22890","AT2G22890.1","Kua-ubiquitin conjugating enzyme hybrid localisation domain; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: fatty acid desaturase A (TAIR:AT4G27030.1); Has 226 Blast hits to 226 proteins in 95 species: Archae - 0; Bacteria - 21; Metazoa - 120; Fungi - 0; Plants - 47; Viruses - 3; Other Eukaryotes - 35 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016265 death ","P ","7.62e-07 ","17/151 (11.3%) ","508/30324 (1.7%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT4G21740","AT4G21740.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0008219 cell death ","P ","7.62e-07 ","17/151 (11.3%) ","508/30324 (1.7%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 LSD1 AT3G53810 PUB17 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G19970","AT1G19970.1","ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G75760.1); Has 893 Blast hits to 892 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 180; Plants - 232; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).","protein_coding",null,null," ","GO:0006612 protein targeting to membrane ","P ","7.73e-07 ","15/151 (9.9%) ","377/30324 (1.2%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT4G30090","AT4G30090.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.1); Has 350 Blast hits to 345 proteins in 81 species: Archae - 4; Bacteria - 10; Metazoa - 172; Fungi - 10; Plants - 96; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).","protein_coding",null,"EMBRYO DEFECTIVE 1353 (emb1353)"," ","GO:0090150 establishment of protein localization to membrane ","P ","8.31e-07 ","15/151 (9.9%) ","379/30324 (1.2%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT2G18630","AT2G18630.1","Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0072657 protein localization to membrane ","P ","8.31e-07 ","15/151 (9.9%) ","379/30324 (1.2%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT3G20510","AT3G20510.1","Transmembrane proteins 14C; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT1G50740.1); Has 449 Blast hits to 449 proteins in 111 species: Archae - 0; Bacteria - 35; Metazoa - 208; Fungi - 10; Plants - 185; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).","protein_coding",null,null," ","GO:0034976 response to endoplasmic reticulum stress ","P ","3.04e-06 ","14/151 (9.3%) ","353/30324 (1.2%) ","CRLK2 PDX1.2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G17860 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT4G25020","AT4G25020.1","D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT1G33520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0033554 cellular response to stress ","P ","4.26e-06 ","27/151 (17.9%) ","1474/30324 (4.9%) ","CRLK2 PDX1.2 CNBT1 AT3G28450 AT1G51840 Kin3 AT3G13430 AT5G46780 CST AT3G26910 AT5G41400 LSD1 AT3G53810 PUB17 ATRAD17 PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G17860 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS SHB1"," "]
["AT1G69430","AT1G69430.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050794 regulation of cellular process ","P ","6.52e-06 ","48/151 (31.8%) ","4116/30324 (13.6%) ","CRLK2 WRKY17 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 RLP3 AT2G28510 AT5G46780 CST CAM9 STN1 AT3G02880 ARR7 CBF1 AT3G26910 AT1G64710 AT5G41400 LSD1 PFA-DSP1 AT3G53810 AT3G04640 AT1G67510 ATRAD17 AT-HSFB2B PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 PLL4 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1 AT5G59450 JMJ18"," "]
["AT1G56140","AT1G56140.1","Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 186029 Blast hits to 134018 proteins in 4752 species: Archae - 143; Bacteria - 15786; Metazoa - 51681; Fungi - 11229; Plants - 84240; Viruses - 441; Other Eukaryotes - 22509 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071495 cellular response to endogenous stimulus ","P ","4.20e-05 ","19/151 (12.6%) ","839/30324 (2.8%) ","CNBT1 ERF8 IP5PII UGT71B6 CST SGT1A ARR7 AT1G64710 LSD1 AT3G04640 PI4K GAMMA 4 RPK1 LYK4 AT2G27500 VPS60.1 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT3G01820","AT3G01820.1","P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine kinase (TAIR:AT2G37250.1); Has 9469 Blast hits to 9393 proteins in 2915 species: Archae - 95; Bacteria - 5951; Metazoa - 891; Fungi - 419; Plants - 430; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009863 salicylic acid mediated signaling pathway ","P ","4.30e-05 ","13/151 (8.6%) ","367/30324 (1.2%) ","CNBT1 Kin3 CST LSD1 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 CPK27 AGB1 CBL1 PARVUS"," "]
["AT5G11000","AT5G11000.1","Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071446 cellular response to salicylic acid stimulus ","P ","4.58e-05 ","13/151 (8.6%) ","369/30324 (1.2%) ","CNBT1 Kin3 CST LSD1 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 CPK27 AGB1 CBL1 PARVUS"," "]
["AT3G59730","AT3G59730.1","Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin-receptor kinase (TAIR:AT3G59700.1); Has 116177 Blast hits to 115063 proteins in 4736 species: Archae - 93; Bacteria - 13334; Metazoa - 42710; Fungi - 10087; Plants - 32841; Viruses - 356; Other Eukaryotes - 16756 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009751 response to salicylic acid stimulus ","P ","1.67e-04 ","14/151 (9.3%) ","487/30324 (1.6%) ","CNBT1 Kin3 CST LSD1 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 CPK27 CRK19 AGB1 CBL1 PARVUS"," "]
["AT1G53625","AT1G53625.1","unknown protein; Has 29996 Blast hits to 6987 proteins in 655 species: Archae - 23; Bacteria - 6686; Metazoa - 10521; Fungi - 1178; Plants - 7439; Viruses - 681; Other Eukaryotes - 3468 (source: NCBI BLink).","protein_coding",null,null," ","GO:0043069 negative regulation of programmed cell death ","P ","1.87e-04 ","9/151 (6.0%) ","169/30324 (0.6%) ","CRLK2 LSD1 AT3G53810 PI4K GAMMA 4 RPK1 AT1G76970 AT4G33920 AGB1 CBL1"," "]
["AT2G30720","AT2G30720.1","Thioesterase/thiol ester dehydrase-isomerase superfamily protein; BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT5G48370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0032870 cellular response to hormone stimulus ","P ","1.99e-04 ","18/151 (11.9%) ","834/30324 (2.8%) ","CNBT1 ERF8 IP5PII UGT71B6 CST SGT1A ARR7 AT1G64710 LSD1 AT3G04640 PI4K GAMMA 4 RPK1 AT2G27500 VPS60.1 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT4G35985","AT4G35985.1","Senescence/dehydration-associated protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT2G17840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).","protein_coding",null,null," ","GO:0044802 single-organism membrane organization ","P ","2.16e-04 ","15/151 (9.9%) ","577/30324 (1.9%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT3G56410","AT3G56410.2","Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT5G05190.1); Has 4873 Blast hits to 3554 proteins in 469 species: Archae - 21; Bacteria - 552; Metazoa - 1496; Fungi - 390; Plants - 373; Viruses - 48; Other Eukaryotes - 1993 (source: NCBI BLink).","protein_coding",null,null," ","GO:0061024 membrane organization ","P ","2.16e-04 ","15/151 (9.9%) ","577/30324 (1.9%) ","CRLK2 CNBT1 AT5G46780 CST AT5G41400 AT3G53810 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS"," "]
["AT1G03010","AT1G03010.1","Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, pollen tube growth; EXPRESSED IN: leaf apex, inflorescence meristem, cauline leaf, root, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT2G47860.1); Has 882 Blast hits to 854 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 870; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009814 defense response, incompatible interaction ","P ","2.26e-04 ","15/151 (9.9%) ","579/30324 (1.9%) ","CNBT1 Kin3 CST CAM9 SGT1A LSD1 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT1G76970 RPP1 CPK27 AGB1 CBL1"," "]
["AT3G28450","AT3G28450.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G27190.1); Has 101664 Blast hits to 59951 proteins in 2302 species: Archae - 40; Bacteria - 6408; Metazoa - 16028; Fungi - 2446; Plants - 69126; Viruses - 161; Other Eukaryotes - 7455 (source: NCBI BLink).","protein_coding",null,null," ","GO:0060548 negative regulation of cell death ","P ","2.29e-04 ","9/151 (6.0%) ","173/30324 (0.6%) ","CRLK2 LSD1 AT3G53810 PI4K GAMMA 4 RPK1 AT1G76970 AT4G33920 AGB1 CBL1"," "]
["AT1G76980","AT1G76980.1","BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding",null,null," ","GO:0035966 response to topologically incorrect protein ","P ","3.73e-04 ","12/151 (7.9%) ","370/30324 (1.2%) ","CRLK2 AT3G28450 AT3G13430 AT3G26910 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 VPS60.1 AT4G33920 AGB1 CBL1"," "]
["AT3G28850","AT3G28850.1","Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G39865.1); Has 637 Blast hits to 625 proteins in 107 species: Archae - 0; Bacteria - 51; Metazoa - 127; Fungi - 21; Plants - 387; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009755 hormone-mediated signaling pathway ","P ","5.06e-04 ","17/151 (11.3%) ","795/30324 (2.6%) ","CNBT1 ERF8 IP5PII UGT71B6 CST ARR7 AT1G64710 LSD1 AT3G04640 PI4K GAMMA 4 RPK1 AT2G27500 VPS60.1 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT5G59450","AT5G59450.1","GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050832 defense response to fungus ","P ","5.37e-04 ","12/151 (7.9%) ","383/30324 (1.3%) ","CNBT1 Kin3 SGT1A PUB17 PI4K GAMMA 4 RPK1 AT1G76970 RPP1 VPS60.1 AGB1 CBL1 ATL9"," "]
["AT3G54000","AT3G54000.1","CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0050789 regulation of biological process ","P ","6.06e-04 ","49/151 (32.5%) ","4911/30324 (16.2%) ","CRLK2 WRKY17 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 RLP3 AT2G28510 AT5G46780 CST CAM9 STN1 AT3G02880 SGT1A ARR7 CBF1 AT3G26910 AT1G64710 AT5G41400 LSD1 PFA-DSP1 AT3G53810 AT3G04640 AT1G67510 ATRAD17 AT-HSFB2B PI4K GAMMA 4 RPK1 AT5G61560 AT2G27500 AT1G76970 PLL4 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1 AT5G59450 JMJ18"," "]
["AT1G17830","AT1G17830.1","Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G73210.1); Has 265 Blast hits to 257 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051707 response to other organism ","P ","6.28e-04 ","24/151 (15.9%) ","1535/30324 (5.1%) ","WRKY17 CNBT1 BRL3 Kin3 CST CAM9 SGT1A LSD1 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT1G76970 RPP1 VPS60.1 CPK27 CRK19 AGB1 CBL1 AT1G03740 AT4G36010 ATL9"," "]
["AT1G07220","AT1G07220.1","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT5G23850.1); Has 670 Blast hits to 661 proteins in 130 species: Archae - 0; Bacteria - 41; Metazoa - 224; Fungi - 131; Plants - 246; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009607 response to biotic stimulus ","P ","6.35e-04 ","24/151 (15.9%) ","1536/30324 (5.1%) ","WRKY17 CNBT1 BRL3 Kin3 CST CAM9 SGT1A LSD1 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT1G76970 RPP1 VPS60.1 CPK27 CRK19 AGB1 CBL1 AT1G03740 AT4G36010 ATL9"," "]
["AT4G36010","AT4G36010.1","Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 1622 Blast hits to 1597 proteins in 186 species: Archae - 0; Bacteria - 48; Metazoa - 58; Fungi - 84; Plants - 1413; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071702 organic substance transport ","P ","2.97e-03 ","24/151 (15.9%) ","1678/30324 (5.5%) ","CRLK2 WRKY17 CNBT1 BRL3 AT1G19970 AT5G46780 CST AT3G02880 AT5G41400 AT4G34180 AT3G53810 PI4K GAMMA 4 AT5G11000 RPK1 AT5G61560 AT2G27500 AT1G76970 PLL4 VPS60.1 AT4G33920 AGB1 CBL1 PARVUS SHB1"," "]
["AT5G46780","AT5G46780.1","VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1); Has 4455 Blast hits to 3562 proteins in 419 species: Archae - 0; Bacteria - 294; Metazoa - 1785; Fungi - 574; Plants - 1062; Viruses - 216; Other Eukaryotes - 524 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009627 systemic acquired resistance ","P ","3.59e-03 ","12/151 (7.9%) ","460/30324 (1.5%) ","CNBT1 Kin3 CST CAM9 LSD1 PI4K GAMMA 4 CRCK1 RPK1 AT1G76970 CPK27 AGB1 CBL1"," "]
["AT3G20530","AT3G20530.1","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071407 cellular response to organic cyclic compound ","P ","4.17e-03 ","13/151 (8.6%) ","551/30324 (1.8%) ","CNBT1 Kin3 CST LSD1 PI4K GAMMA 4 RPK1 AT2G27500 AT1G76970 VPS60.1 CPK27 AGB1 CBL1 PARVUS"," "]
["AT4G32030","AT4G32030.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).","protein_coding",null,null," ","GO:0065007 biological regulation ","P ","4.37e-03 ","50/151 (33.1%) ","5410/30324 (17.8%) ","CRLK2 WRKY17 CNBT1 BRL3 AT3G28450 AT5G12940 CIPK2 ERF8 IP5PII UGT71B6 Kin3 ZF3 AT3G13430 RLP3 AT2G28510 AT5G46780 CST CAM9 STN1 AT3G02880 SGT1A ARR7 CBF1 AT3G26910 AT1G64710 AT5G41400 LSD1 PFA-DSP1 AT3G53810 AT3G04640 AT1G67510 ATRAD17 AT-HSFB2B PI4K GAMMA 4 RPK1 AGP16 AT5G61560 AT2G27500 AT1G76970 PLL4 VPS60.1 CPK27 AT4G33920 AT3G08030 AGB1 CBL1 PARVUS SHB1 AT5G59450 JMJ18"," "]
["AT5G45280","AT5G45280.2","Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).","protein_coding",null,null," ","GO:0009620 response to fungus ","P ","4.97e-03 ","13/151 (8.6%) ","560/30324 (1.8%) ","CNBT1 Kin3 SGT1A PUB17 PI4K GAMMA 4 RPK1 AT5G61560 AT1G76970 RPP1 VPS60.1 AGB1 CBL1 ATL9"," "]
["AT1G64700","AT1G64700.1","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:1901701 cellular response to oxygen-containing compound ","P ","7.22e-03 ","17/151 (11.3%) ","969/30324 (3.2%) ","CNBT1 IP5PII UGT71B6 Kin3 CST LSD1 PI4K GAMMA 4 RPK1 LYK4 AT2G27500 AT1G76970 VPS60.1 CPK27 AT3G08030 AGB1 CBL1 PARVUS"," "]
["AT3G26910","AT3G26910.2","hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41100.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0051704 multi-organism process ","P ","8.12e-03 ","25/151 (16.6%) ","1905/30324 (6.3%) ","AT1G03010 WRKY17 CNBT1 BRL3 Kin3 CST CAM9 SGT1A LSD1 PUB17 PI4K GAMMA 4 CRCK1 RPK1 AT5G61560 LYK4 AT1G76970 RPP1 VPS60.1 CPK27 CRK19 AGB1 CBL1 AT1G03740 AT4G36010 ATL9"," "]
["AT5G16200","AT5G16200.1","50S ribosomal protein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G40020","AT4G40020.1","Myosin heavy chain-related protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 160438 Blast hits to 85353 proteins in 3205 species: Archae - 2021; Bacteria - 26641; Metazoa - 65466; Fungi - 13044; Plants - 8368; Viruses - 589; Other Eukaryotes - 44309 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT3G02880","AT3G02880.1","Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G16590.1); Has 140419 Blast hits to 103539 proteins in 3753 species: Archae - 105; Bacteria - 10616; Metazoa - 37369; Fungi - 7261; Plants - 69256; Viruses - 279; Other Eukaryotes - 15533 (source: NCBI BLink).","protein_coding",null,null," ","Cellular Component",{"$nulls":5}," "]
["AT5G66800","AT5G66800.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT3G08030","AT3G08030.1","Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT2G41800.1); Has 380 Blast hits to 353 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0005886 plasma membrane ","C ","1.41e-12 ","53/151 (35.1%) ","3258/30324 (10.7%) ","CRLK2 AT1G56140 AT1G03010 CNBT1 BRL3 AT1G66910 AT4G29050 AT3G20590 AT3G28450 CIPK2 AGP2 Kin3 AT5G11970 AT3G59730 RLP3 AT5G59070 AT1G64760 CST AT2G17705 CAM9 AT1G63830 AT1G53440 AT3G02880 AT2G43120 AT3G28850 AtIPCS1 AGP20 AT3G53810 AT1G67510 AT3G50190 AT2G18630 CRCK1 AT5G11000 RPK1 AGP16 AT5G61560 LYK4 AT2G27500 AT5G47710 AT3G52710 PLL4 RPP1 CPK27 AGP23 CSLD2 CRK19 AT3G08030 AGB1 CBL1 AT2G41905 AT1G11960 AT5G45280 SHB1"," "]
["AT1G15890","AT1G15890.1","Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 17730 Blast hits to 16510 proteins in 695 species: Archae - 12; Bacteria - 829; Metazoa - 2844; Fungi - 202; Plants - 13567; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).","protein_coding",null,null," ","GO:0071944 cell periphery ","C ","5.39e-12 ","56/151 (37.1%) ","3734/30324 (12.3%) ","CRLK2 AT1G56140 AT1G03010 CNBT1 BRL3 AT1G66910 AT4G29050 AT3G20590 AT3G28450 CIPK2 AGP2 Kin3 AT5G11970 AT3G59730 RLP3 AT5G59070 AT1G64760 CST AT2G17705 CAM9 AT1G63830 AT1G53440 AT3G02880 AT2G43120 AT3G28850 AtIPCS1 AGP20 AT4G34180 AT3G53810 AT1G67510 AT3G50190 AT2G18630 CRCK1 AT5G11000 RPK1 AGP16 AT5G61560 LYK4 AT2G27500 AT1G17860 EXO70H1 AT5G47710 AT3G52710 PLL4 RPP1 CPK27 AGP23 CSLD2 CRK19 AT3G08030 AGB1 CBL1 AT2G41905 AT1G11960 AT5G45280 SHB1"," "]
["AT2G43120","AT2G43120.1","RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016020 membrane ","C ","1.42e-07 ","58/151 (38.4%) ","5066/30324 (16.7%) ","CRLK2 AT1G56140 AT1G03010 CNBT1 BRL3 AT1G66910 AT4G29050 AT3G20590 AT3G28450 LBD24 AT1G19970 CIPK2 AGP2 UGT71B6 Kin3 AT5G11970 AT3G59730 RLP3 AT5G59070 AT1G64760 CST AT2G17705 CAM9 AT1G63830 AT1G53440 AT3G02880 AT2G43120 AT3G28850 AtIPCS1 AGP20 AT3G53810 AT3G04640 AT1G67510 AT3G50190 AT2G18630 CRCK1 AT5G11000 RPK1 AGP16 AT5G61560 LYK4 AT2G27500 AT5G47710 AT3G52710 PLL4 RPP1 CPK27 AGP23 CSLD2 CRK19 AT3G08030 AGB1 CBL1 AT2G41905 AT1G11960 AT4G36010 AT5G45280 SHB1"," "]
["AT5G47710","AT5G47710.1","Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031224 intrinsic to membrane ","C ","4.47e-03 ","12/151 (7.9%) ","470/30324 (1.5%) ","AT1G19970 AGP2 AT1G64760 AT3G02880 AGP20 AT3G04640 AGP16 AT2G27500 AGP23 CSLD2 AT4G36010 SHB1"," "]
["AT1G63830","AT1G63830.2","PLAC8 family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).","protein_coding",null,null," ","GO:0031225 anchored to membrane ","C ","4.70e-03 ","9/151 (6.0%) ","249/30324 (0.8%) ","AGP2 AT1G64760 AT3G02880 AGP20 AT3G04640 AGP16 AT2G27500 AGP23 AT4G36010"," "]
["AT2G43320","AT2G43320.1","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: Putative methyltransferase family protein (TAIR:AT4G14000.1); Has 304 Blast hits to 295 proteins in 127 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 41; Plants - 98; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G29050","AT4G29050.1","Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: carbohydrate binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Legume lectin, beta chain,  Mn/Ca-binding site (InterPro:IPR019825); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT1G70110.1); Has 123408 Blast hits to 121938 proteins in 4814 species: Archae - 120; Bacteria - 14220; Metazoa - 44809; Fungi - 10855; Plants - 34836; Viruses - 425; Other Eukaryotes - 18143 (source: NCBI BLink).","protein_coding",null,null," "," ",{"$nulls":5}," "]
["AT3G07190","AT3G07190.1","B-cell receptor-associated protein 31-like ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like  (TAIR:AT5G48660.1); Has 1953 Blast hits to 1676 proteins in 344 species: Archae - 82; Bacteria - 317; Metazoa - 600; Fungi - 162; Plants - 230; Viruses - 29; Other Eukaryotes - 533 (source: NCBI BLink).","protein_coding",null,null," ","Molecular Function",{"$nulls":5}," "]
["AT5G48660","AT5G48660.1","B-cell receptor-associated protein 31-like ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated protein 31-like  (TAIR:AT3G07190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO Term ","Aspect ","P-value ","Sample frequency ","Background frequency ","Genes"," "]
["AT1G51840","AT1G51840.1","protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 549 Blast hits to 546 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 549; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016301 kinase activity ","F ","6.83e-09 ","29/151 (19.2%) ","1279/30324 (4.2%) ","CRLK2 AT1G56140 Mik BRL3 AT1G66910 AT3G20530 AT4G29050 AT3G28450 CIPK2 Kin3 AT3G59730 RLP3 CST AT1G53440 AT3G02880 AT3G01820 AT3G53810 AT1G67510 AT1G68330 PI4K GAMMA 4 FAB1D CRCK1 RPK1 AT5G61560 LYK4 ATN1 CPK27 CRK19 AT1G03740"," "]
["AT5G61560","AT5G61560.1","U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016772 transferase activity, transferring phosphorus-containing groups ","F ","1.17e-07 ","29/151 (19.2%) ","1441/30324 (4.8%) ","CRLK2 AT1G56140 Mik BRL3 AT1G66910 AT3G20530 AT4G29050 AT3G28450 CIPK2 Kin3 AT3G59730 RLP3 CST AT1G53440 AT3G02880 AT3G01820 AT3G53810 AT1G67510 AT1G68330 PI4K GAMMA 4 FAB1D CRCK1 RPK1 AT5G61560 LYK4 ATN1 CPK27 CRK19 AT1G03740"," "]
["AT2G28510","AT2G28510.1","Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016740 transferase activity ","F ","1.31e-04 ","34/151 (22.5%) ","2589/30324 (8.5%) ","CRLK2 AT1G56140 Mik BRL3 AT1G66910 AT3G20530 AT4G29050 AT3G28450 CIPK2 UGT71B6 Kin3 AT3G59730 RLP3 AT5G59070 CST AT1G53440 AT3G02880 AtIPCS1 AT3G01820 AT3G53810 AT1G67510 AT1G68330 PI4K GAMMA 4 FAB1D CRCK1 RPK1 AT5G61560 LYK4 ATN1 CPK27 CSLD2 CRK19 PARVUS AT1G03740"," "]
["AT5G01710","AT5G01710.1","methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding",null,null," ","GO:0016773 phosphotransferase activity, alcohol group as acceptor ","F ","3.97e-03 ","14/151 (9.3%) ","637/30324 (2.1%) ","AT1G56140 BRL3 AT3G28450 RLP3 CST AT3G02880 AT1G67510 AT1G68330 PI4K GAMMA 4 FAB1D CRCK1 RPK1 ATN1 CRK19"," "]
["AT1G68330","AT1G68330.1","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).","protein_coding",null,null," ",{"$nulls":6}," "]
["AT4G11660","AT4G11660.1","member of Heat Stress Transcription Factor (Hsf) family","protein_coding"," (AT-HSFB2B)"," (AT-HSFB2B);HEAT SHOCK TRANSCRIPTION FACTOR  B2B (HSFB2B); (HSF7)"," ","  ",{"$nulls":5}," "]
["AT3G27560","AT3G27560.1","encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.","protein_coding"," (ATN1)"," (ATN1)"," ",{"$nulls":6}," "]
["AT1G07620","AT1G07620.1","ATOBGM; FUNCTIONS IN: magnesium ion binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT5G02390.1); Has 561 Blast hits to 511 proteins in 87 species: Archae - 0; Bacteria - 20; Metazoa - 47; Fungi - 31; Plants - 219; Viruses - 2; Other Eukaryotes - 242 (source: NCBI BLink).","protein_coding"," (ATOBGM)","TON1 RECRUITING MOTIF 32 (TRM32); (ATOBGM)"," ",{"$nulls":6}," "]
["AT4G23570","AT4G23570.3","Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly  expressed than AtSGT1. The N-terminal TPR domain of  AtSGT1a reduces the steady-state level of Arabidopsis SGT1  proteins whereas the same domain from AtSGT1b enhances  SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.","protein_coding"," (SGT1A)"," (SGT1A)"," ",{"$nulls":6}," "]
["AT1G07130","AT1G07130.1","Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping.","protein_coding"," (STN1)"," (ATSTN1); (STN1)"," ",{"$nulls":6}," "]
["AT3G10640","AT3G10640.1","VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G04850.1); Has 1147 Blast hits to 1145 proteins in 230 species: Archae - 3; Bacteria - 8; Metazoa - 447; Fungi - 307; Plants - 230; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).","protein_coding"," (VPS60.1)"," (VPS60.1)"," ",{"$nulls":6}," "]
["AT3G44250","AT3G44250.1","putative cytochrome P450","protein_coding","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 38 (CYP71B38)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 38 (CYP71B38)"," ",{"$nulls":6}," "]
["AT1G01480","AT1G01480.1","a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family,  isolated from a flower-specific cDNA library.","protein_coding","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 (ACS2)"," (AT-ACC2);1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 (ACS2)"," ",{"$nulls":6}," "]
["AT3G54020","AT3G54020.1","Inositol phosphorylceramide synthase","protein_coding","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 1 (AtIPCS1)","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 1 (AtIPCS1)"," ",{"$nulls":6}," "]
["AT2G35000","AT2G35000.1","E3 ligase-like protein induced by chitin oligomers.","protein_coding","ARABIDOPSIS TOXICOS EN LEVADURA 9 (ATL9)","ARABIDOPSIS TOXICOS EN LEVADURA 9 (ATL9)"," ",{"$nulls":6}," "]
["AT2G46330","AT2G46330.1","Encodes arabinogalactan protein (AGP16).","protein_coding","ARABINOGALACTAN PROTEIN 16 (AGP16)"," (ATAGP16);ARABINOGALACTAN PROTEIN 16 (AGP16)"," ",{"$nulls":6}," "]
["AT2G22470","AT2G22470.1","Encodes arabinogalactan-protein (AGP2).","protein_coding","ARABINOGALACTAN PROTEIN 2 (AGP2)","ARABINOGALACTAN PROTEIN 2 (AGP2); (ATAGP2)"," ",{"$nulls":6}," "]
["AT3G61640","AT3G61640.1","arabinogalactan protein 20 (AGP20); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1070 (InterPro:IPR009424); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 16 (TAIR:AT2G46330.1); Has 106 Blast hits to 106 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","ARABINOGALACTAN PROTEIN 20 (AGP20)","ARABINOGALACTAN PROTEIN 20 (AtAGP20);ARABINOGALACTAN PROTEIN 20 (AGP20)"," ",{"$nulls":6}," "]
["AT3G57690","AT3G57690.1","Encodes a putative arabinogalactan-protein (AGP23).","protein_coding","ARABINOGALACTAN PROTEIN 23 (AGP23)","ARABINOGALACTAN PROTEIN 23 (AGP23);ARABINOGALACTAN-PROTEIN 23 (ATAGP23)"," ",{"$nulls":6}," "]
["AT3G13380","AT3G13380.1","Similar to BRI, brassinosteroid receptor protein.","protein_coding","BRI1-LIKE 3 (BRL3)","BRI1-LIKE 3 (BRL3)"," ",{"$nulls":6}," "]
["AT4G25490","AT4G25490.1","Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.","protein_coding","C-REPEAT/DRE BINDING FACTOR 1 (CBF1)","DRE BINDING PROTEIN 1B (DREB1B); (ATCBF1);C-REPEAT/DRE BINDING FACTOR 1 (CBF1)"," ",{"$nulls":6}," "]
["AT4G17615","AT4G17615.1","Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.","protein_coding","CALCINEURIN B-LIKE PROTEIN 1 (CBL1)","CALCINEURIN B-LIKE PROTEIN 1 (CBL1);SOS3-LIKE CALCIUM BINDING PROTEIN 5 (SCABP5);ARABIDOPSIS THALIANA CALCINEURIN B-LIKE PROTEIN (ATCBL1)"," ",{"$nulls":6}," "]
["AT4G04700","AT4G04700.1","member of Calcium Dependent Protein Kinase","protein_coding","CALCIUM-DEPENDENT PROTEIN KINASE 27 (CPK27)","CALCIUM-DEPENDENT PROTEIN KINASE 27 (CPK27)"," ",{"$nulls":6}," "]
["AT5G15730","AT5G15730.2","Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G54590.2); Has 117437 Blast hits to 116208 proteins in 4662 species: Archae - 111; Bacteria - 12502; Metazoa - 44353; Fungi - 9876; Plants - 32963; Viruses - 432; Other Eukaryotes - 17200 (source: NCBI BLink).","protein_coding","CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 (CRLK2)"," (AtCRLK2);CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 (CRLK2)"," ",{"$nulls":6}," "]
["AT3G51920","AT3G51920.1","encodes a divergent member of calmodulin, which is an EF-hand family of Ca2+-binding proteins. This gene is expressed in leaves, flowers and siliques. The gene functionally complements yeast calmodulin 1 (CAM1) but only  when selected against the plasmid harboring wild-type yeast sequences. Also the protein does not form formed a complex with a basic amphiphilic helical peptide in the presence of Ca2+ in vitro. Authors suggest that this gene may represent a Ca2+-binding sensor protein that interacts with a more limited set of target proteins than do more conventional CaM isoforms. Mutations in this gene alter plant responses to abiotic stress and abscisic acid.","protein_coding","CALMODULIN 9 (CAM9)","CALMODULIN 9 (CAM9);CALMODULIN LIKE PROTEIN 9 (CML9); (ATCML9)"," ",{"$nulls":6}," "]
["AT5G58940","AT5G58940.1","Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA","protein_coding","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CRCK1)","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CRCK1)"," ",{"$nulls":6}," "]
["AT4G35600","AT4G35600.2","Encodes a receptor-like cytoplasmic kinase that acts as a spatial inhibitor of cell separation. Analysis of the cDNA previously described in Meiners et al., 1991 revealed mistakes in the predicted open reading frame.","protein_coding","CAST AWAY (CST)","KINASE 4 (KIN4);CONNEXIN 32 (CX32);CAST AWAY (CST)"," ",{"$nulls":6}," "]
["AT5G07070","AT5G07070.1","Encodes CBL-interacting protein kinase 2 (CIPK2).","protein_coding","CBL-INTERACTING PROTEIN KINASE 2 (CIPK2)","SNF1-RELATED PROTEIN KINASE 3.2 (SnRK3.2);CBL-INTERACTING PROTEIN KINASE 2 (CIPK2)"," ",{"$nulls":6}," "]
["AT5G16910","AT5G16910.1","encodes a gene similar to cellulose synthase. Located in Golgi membranes.","protein_coding","CELLULOSE-SYNTHASE LIKE D2 (CSLD2)"," (ATCSLD2);CELLULOSE-SYNTHASE LIKE D2 (CSLD2)"," ",{"$nulls":6}," "]
["AT5G01712","AT5G01712.1","Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF48 represents a conserved upstream opening reading frame relative to major ORF AT5G01710.1","protein_coding","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 48 (CPuORF48)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 48 (CPuORF48)"," ",{"$nulls":6}," "]
["AT3G17700","AT3G17700.1","cyclic nucleotide-binding transporter 1, member of a family  of cyclic nucleotide gated channels.","protein_coding","CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1 (CNBT1)","CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1 (CNBT1);CYCLIC NUCLEOTIDE-GATED CHANNEL 20 (ATCNGC20); (CNGC20)"," ",{"$nulls":6}," "]
["AT4G23270","AT4G23270.1","Encodes a cysteine-rich receptor-like protein kinase.","protein_coding","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 19 (CRK19)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 19 (CRK19)"," ",{"$nulls":6}," "]
["AT1G53170","AT1G53170.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding","ETHYLENE RESPONSE FACTOR 8 (ERF8)","ETHYLENE RESPONSE FACTOR 8 (ERF8);ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4 (ATERF8); (ATERF-8)"," ",{"$nulls":6}," "]
["AT3G55150","AT3G55150.1","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","protein_coding","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H1 (EXO70H1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H1 (EXO70H1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H1 (ATEXO70H1)"," ",{"$nulls":6}," "]
["AT1G34260","AT1G34260.1","Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.","protein_coding","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D)","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D)"," ",{"$nulls":6}," "]
["AT2G02010","AT2G02010.1","glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).","protein_coding","GLUTAMATE DECARBOXYLASE 4 (GAD4)","GLUTAMATE DECARBOXYLASE 4 (GAD4)"," ",{"$nulls":6}," "]
["AT4G34460","AT4G34460.1","Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER.  Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase.  It seems to be involved in the calcium-mediated response to extracellular ATP.","protein_coding","GTP BINDING PROTEIN BETA 1 (AGB1)","ERECTA-LIKE 4 (ELK4);GTP BINDING PROTEIN BETA 1 (AGB1); (ATAGB1)"," ",{"$nulls":6}," "]
["AT1G64760","AT1G64760.1","O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 2673 Blast hits to 2603 proteins in 152 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 38; Plants - 2613; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).","protein_coding","HYPERSENSITIVE TO EXCESS BORON 1 (HEB1)","HYPERSENSITIVE TO EXCESS BORON 1 (HEB1)"," ",{"$nulls":6}," "]
["AT4G18010","AT4G18010.1","Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.","protein_coding","INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII)","INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII);MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 (5PTASE2);MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 (AT5PTASE2)"," ",{"$nulls":6}," "]
["AT1G30810","AT1G30810.1","JMJ18 encodes a novel JmjC domain- containing histone H3K4 demethylase.","protein_coding","JUMONJI DOMAIN-CONTAINING PROTEIN 18 (JMJ18)","JUMONJI DOMAIN-CONTAINING PROTEIN 18 (JMJ18)"," ",{"$nulls":6}," "]
["AT2G17220","AT2G17220.1","Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated.","protein_coding","KINASE 3 (KIN3)","KINASE 3 (KIN3)"," ",{"$nulls":6}," "]
["AT4G20380","AT4G20380.8","LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge","protein_coding","LESION SIMULATING DISEASE (LSD1)","LESION SIMULATING DISEASE (LSD1)"," ",{"$nulls":6}," "]
["AT1G07900","AT1G07900.1","LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","LOB DOMAIN-CONTAINING PROTEIN 1 (LBD1)","LOB DOMAIN-CONTAINING PROTEIN 1 (LBD1)"," ",{"$nulls":6}," "]
["AT2G28500","AT2G28500.1","LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink).","protein_coding","LOB DOMAIN-CONTAINING PROTEIN 11 (LBD11)","LOB DOMAIN-CONTAINING PROTEIN 11 (LBD11)"," ",{"$nulls":6}," "]
["AT3G26660","AT3G26660.1","LOB domain-containing protein 24 (LBD24); INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 23 (TAIR:AT3G26620.1); Has 984 Blast hits to 979 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 984; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","LOB DOMAIN-CONTAINING PROTEIN 24 (LBD24)","LOB DOMAIN-CONTAINING PROTEIN 24 (LBD24)"," ",{"$nulls":6}," "]
["AT2G23770","AT2G23770.1","protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Immunoglobulin-like (InterPro:IPR007110), Protein kinase, catalytic domain (InterPro:IPR000719), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 93408 Blast hits to 92552 proteins in 3130 species: Archae - 75; Bacteria - 9623; Metazoa - 34895; Fungi - 6839; Plants - 28747; Viruses - 328; Other Eukaryotes - 12901 (source: NCBI BLink).","protein_coding","LYSM-CONTAINING RECEPTOR-LIKE KINASE 4 (LYK4)","LYSM-CONTAINING RECEPTOR-LIKE KINASE 4 (LYK4)"," ",{"$nulls":6}," "]
["AT5G58730","AT5G58730.1","pfkB-like carbohydrate kinase family protein; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G10260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).","protein_coding","MYO-INOSITOL KINASE (MIK)","MYO-INOSITOL KINASE (MIK)"," ",{"$nulls":6}," "]
["AT1G19300","AT1G19300.1","The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.","protein_coding","PARVUS (PARVUS)","GALACTURONOSYLTRANSFERASE-LIKE 1 (GATL1); (ATGATL1);GAOLAOZHUANGREN 1 (GLZ1);PARVUS (PARVUS)"," ",{"$nulls":6}," "]
["AT2G39220","AT2G39220.1","PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).","protein_coding","PATATIN-LIKE PROTEIN 6 (PLP6)"," (PLA IIB);PATATIN-LIKE PROTEIN 6 (PLP6)"," ",{"$nulls":6}," "]
["AT2G46500","AT2G46500.1","Phosphoinositide  kinase which undergo autophosphorylation and phosphorylate serine/threonine  residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.","protein_coding","PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (PI4K GAMMA 4)","PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (PI4K GAMMA 4);PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (ATPI4K GAMMA 4);UBIQUITIN-LIKE DOMAIN KINASE GAMMA 4 (UBDK GAMMA 4)"," ",{"$nulls":6}," "]
["AT4G11840","AT4G11840.1","member of C2-PLD subfamily","protein_coding","PHOSPHOLIPASE D GAMMA 3 (PLDGAMMA3)","PHOSPHOLIPASE D GAMMA 3 (PLDGAMMA3)"," ",{"$nulls":6}," "]
["AT1G68450","AT1G68450.1","VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT3G18360.1); Has 133 Blast hits to 133 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","PIGMENT DEFECTIVE 337 (PDE337)","PIGMENT DEFECTIVE 337 (PDE337)"," ",{"$nulls":6}," "]
["AT1G05000","AT1G05000.2","Encodes an atypical dual-speci&#64257;city phosphatase.","protein_coding","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 1 (PFA-DSP1)"," (AtPFA-DSP1);PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 1 (PFA-DSP1)"," ",{"$nulls":6}," "]
["AT1G29340","AT1G29340.1","Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins  against Pseudomonas syringae pv tomato.","protein_coding","PLANT U-BOX 17 (PUB17)","ARABIDOPSIS THALIANA PLANT U-BOX 17 (ATPUB17);PLANT U-BOX 17 (PUB17)"," ",{"$nulls":6}," "]
["AT2G28890","AT2G28890.1","Encodes a protein phosphatase 2C  like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.","protein_coding","POLTERGEIST LIKE 4 (PLL4)","POLTERGEIST LIKE 4 (PLL4)"," ",{"$nulls":6}," "]
["AT3G16050","AT3G16050.1","Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.","protein_coding","PYRIDOXINE BIOSYNTHESIS 1.2 (PDX1.2)"," (A37);PYRIDOXINE BIOSYNTHESIS 1.2 (PDX1.2);ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2 (ATPDX1.2)"," ",{"$nulls":6}," "]
["AT5G66130","AT5G66130.1","Encodes a homolog to yeast RAD17. Involved in the regulation of DNA damage repair and homologous recombination.  Mutant has increased sensitivity to MMS and increased telomere lengths.","protein_coding","RADIATION SENSITIVE 17 (ATRAD17)","RADIATION SENSITIVE 17 (RAD17);RADIATION SENSITIVE 17 (ATRAD17)"," ",{"$nulls":6}," "]
["AT1G17250","AT1G17250.1","receptor like protein 3 (RLP3); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 81484 Blast hits to 24794 proteins in 958 species: Archae - 37; Bacteria - 4331; Metazoa - 15807; Fungi - 760; Plants - 53957; Viruses - 2; Other Eukaryotes - 6590 (source: NCBI BLink).","protein_coding","RECEPTOR LIKE PROTEIN 3 (RLP3)","RECEPTOR LIKE PROTEIN 3 (RLP3);RECEPTOR LIKE PROTEIN 3 (AtRLP3)"," ",{"$nulls":6}," "]
["AT1G69270","AT1G69270.1","RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1.","protein_coding","RECEPTOR-LIKE PROTEIN KINASE 1 (RPK1)","RECEPTOR-LIKE PROTEIN KINASE 1 (RPK1)"," ",{"$nulls":6}," "]
["AT3G44480","AT3G44480.1","Encodes a TIR-NB-LRR R-protein RPP1 that confers resistance to Peronospora parasitica (downy mildew).","protein_coding","RECOGNITION OF PERONOSPORA PARASITICA 1 (RPP1)"," (cog1);RECOGNITION OF PERONOSPORA PARASITICA 1 (RPP1)"," ",{"$nulls":6}," "]
["AT1G19050","AT1G19050.1","Encodes a member of the Arabidopsis response regulator (ARR) family, most closely related to ARR15. A two-component response regulator protein containing a phosphate accepting domain in the receiver domain but lacking a DNA binding domain in the output domain. Involved in response to cytokinin and meristem stem cell maintenance. Arr7 protein is stabilized by cytokinin.","protein_coding","RESPONSE REGULATOR 7 (ARR7)","RESPONSE REGULATOR 7 (ARR7)"," ",{"$nulls":6}," "]
["AT1G09950","AT1G09950.1","RESPONSE TO ABA AND SALT 1 (RAS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT1G58330.1); Has 520 Blast hits to 520 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).","protein_coding","RESPONSE TO ABA AND SALT 1 (RAS1)","RESPONSE TO ABA AND SALT 1 (RAS1)"," ",{"$nulls":6}," "]
["AT4G25350","AT4G25350.1","SHB1 encodes a nuclear and cytosolic protein that has motifs  homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING  FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation  phenotypes. Acts upstream of HFR1. Regulates seed development.","protein_coding","SHORT HYPOCOTYL UNDER BLUE1 (SHB1)","SHORT HYPOCOTYL UNDER BLUE1 (SHB1)"," ",{"$nulls":6}," "]
["AT5G62520","AT5G62520.1","Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","protein_coding","SIMILAR TO RCD ONE 5 (SRO5)","SIMILAR TO RCD ONE 5 (SRO5)"," ",{"$nulls":6}," "]
["AT3G21780","AT3G21780.1","Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.","protein_coding","UDP-GLUCOSYL TRANSFERASE 71B6 (UGT71B6)","UDP-GLUCOSYL TRANSFERASE 71B6 (UGT71B6)"," ",{"$nulls":6}," "]
["AT1G16140","AT1G16140.1","pseudogene similar to wall-associated kinase protein family","pseudogene","WALL ASSOCIATED KINASE-LIKE 3 (WAKL3)","WALL ASSOCIATED KINASE-LIKE 3 (WAKL3)"," ",{"$nulls":6}," "]
["AT1G16090","AT1G16090.1","WAK-like kinase","protein_coding","WALL ASSOCIATED KINASE-LIKE 7 (WAKL7)","WALL ASSOCIATED KINASE-LIKE 7 (WAKL7)"," ",{"$nulls":6}," "]
["AT2G24570","AT2G24570.1","member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","protein_coding","WRKY DNA-BINDING PROTEIN 17 (WRKY17)"," (AtWRKY17);WRKY DNA-BINDING PROTEIN 17 (WRKY17)"," ",{"$nulls":6}," "]
["AT5G43170","AT5G43170.1","Encodes zinc finger protein.  mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.","protein_coding","ZINC-FINGER PROTEIN 3 (ZF3)","ZINC-FINGER PROTEIN 3 (ZF3);ZINC-FINGER PROTEIN 3 (AZF3)"," ",{"$nulls":6}," "]
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