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["Additional file 12 for “High resolution analysis of selection sweeps identified between fine-wool Merino and coarse-wool Churra sheep breeds”."]
["Authors: Beatriz Gutiérrez-Gil, Cristina Esteban-Blanco, Pamela Wiener, Praveen Krishna Chitneedi, Aroa Suarez-Vega, Juan-José Arranz"]
["Additional file 12 Table S8. Selection signals identified by the cross-population extended haplotype homozygosity (XP-EHH) analysis performed between the Merino (Australian Industry Merino, "]
["Australian Merino and Australian Poll Merino) and the Churra populations analyzed in this study."]
["Selection signal ","Chromosome","Start marker","End marker","Start position (Mb)","End position (Mb)","Length (Mb)","Most extreme XPEHH value (1)"]
["XPEHH-SS1",2,"OAR2_55248792.1","OAR2_57832237.1",51.658967,53.837176,2.1782090000000025,6.29701540163461]
["XPEHH-SS2",2,"OAR2_58056173_X.1",null,53.991275,null,null,3.38528569379294]
["XPEHH-SS3",2,"s46023.1","OAR2_80945838.1",75.644823,75.970858,0.3260350000000045,3.89265092217818]
["XPEHH-SS4",2,"OAR2_81513306.1","OAR2_82184802.1",76.515135,77.075145,0.5600100000000054,4.26641751978594]
["XPEHH-SS5",2,"s59502.1","OAR2_83298600.1",77.328509,78.072799,0.7442900000000066,4.14705970061279]
["XPEHH-SS6",2,"OAR2_83532585.1","OAR2_83580344.1",78.316809,78.360957,0.04414799999999275,3.73000726055357]
["XPEHH-SS7",2,"OAR2_84010413.1","OAR2_84382185.1",78.854385,79.189919,0.33553400000000977,4.57065525782968]
["XPEHH-SS8",2,"OAR2_85201834.1","OAR2_87125486.1",80.032995,81.930808,1.8978129999999993,6.07343954881067]
["XPEHH-SS9",2,"OAR2_87487877_X.1",null,82.290592,null,null,3.40191938953876]
["XPEHH-SS10",3,"OAR3_106077077.1",null,99.757931,null,null,3.34374883175755]
["XPEHH-SS11",3,"OAR3_160028723.1",null,150.096959,null,null,3.35102140743551]
["XPEHH-SS12",3,"OAR3_160648865.1","OAR3_161063988.1",150.560987,150.931844,0.3708570000000009,5.28432592022437]
["XPEHH-SS13",3,"s59799.1","OAR3_162871753.1",151.088496,152.33414,1.2456439999999986,5.23171885103725]
["XPEHH-SS14",3,"s59746.1","OAR3_164185125.1",152.6442,153.519437,0.8752369999999985,6.65060600674637]
["XPEHH-SS15",3,"OAR3_164375334.1","OAR3_164422954.1",153.710559,153.757136,0.04657700000001341,3.51424091180262]
["XPEHH-SS16",3,"s26177.1","OAR3_165200988.1",154.006814,154.402834,0.39602000000002135,4.32409800497075]
["XPEHH-SS17",3,"OAR3_165450843.1","OAR3_169414477.1",154.63828,158.339544,3.7012639999999806,5.40937703169269]
["XPEHH-SS18",3,"DU271757_584.1","OAR3_170924636.1",159.773653,159.795155,0.021501999999998134,3.46051837487711]
["XPEHH-SS19",3,"OAR3_171385789.1","s47733.1",160.269185,160.453948,0.18476300000000379,3.7628183292181]
["XPEHH-SS20",3,"OAR3_178784224.1","OAR3_178800988.1",166.471449,166.487854,0.016404999999991787,3.48407637675668]
["XPEHH-SS21",3,"OAR3_179850650.1","OAR3_179997804.1",167.408655,167.562727,0.1540719999999851,3.60079446640472]
["XPEHH-SS22",3,"OAR3_180541476.1",null,168.100757,null,null,3.43718278095221]
["XPEHH-SS23",3,"s55579.1","OAR3_192400372.1",178.673837,179.067397,0.3935600000000079,3.55920774753191]
["XPEHH-SS24",3,"s07782.1","s67950.1",179.81592,180.128893,0.3129729999999995,4.06612345711167]
["XPEHH-SS25",3,"CL635241_413.1","OAR3_196375072.1",182.202867,182.367859,0.16499200000001224,3.83013492716912]
["XPEHH-SS26",3,"OAR3_196880003.1","OAR3_196904777.1",182.867529,182.900674,0.033145000000018854,3.37287620945013]
["XPEHH-SS27",3,"OAR3_197402139.1","OAR3_197466728.1",183.36893,183.429797,0.06086700000000178,4.0613765863662]
["XPEHH-SS28",3,"OAR3_198228001.1","OAR3_199729264.1",184.048363,185.471518,1.4231550000000084,4.34912252981501]
["XPEHH-SS29",3,"OAR3_200888015.1",null,186.673626,null,null,3.35146806685463]
["XPEHH-SS30",3,"OAR3_201456676.1","OAR3_201713150.1",187.199826,187.459238,0.25941199999999753,4.1296260444984]
["XPEHH-SS31",3,"OAR3_201886269.1","OAR3_202943170.1",187.634152,188.481721,0.8475689999999929,4.32288675302991]
["XPEHH-SS32",3,"OAR3_203338501.1","OAR3_203471372_X.1",188.871122,188.948507,0.07738499999999249,3.43281040453838]
["XPEHH-SS33",3,"OAR3_203882433.1","OAR3_204124891.1",189.304896,189.547874,0.2429779999999937,4.47034246465786]
["XPEHH-SS34",5,"OAR5_33929699.1",null,30.717939,null,null,3.4433191197656]
["XPEHH-SS35",5,"OAR5_35340500.1","OAR5_35349345.1",31.847535,31.855669,0.00813399999999831,4.21914387583766]
["XPEHH-SS36",5,"s11555.1","OAR5_35963528.1",32.316883,32.419781,0.10289800000000326,4.36241834216023]
["XPEHH-SS37",5,"OAR5_50244014.1",null,46.156001,null,null,3.36207228795978]
["XPEHH-SS38",5,"s70130.1","OAR5_55827200.1",50.882591,51.442911,0.5603200000000044,4.02778065148944]
["XPEHH-SS39",5,"OAR5_56291790.1","OAR5_56351796.1",51.881265,51.934194,0.052928999999998894,3.96538707834742]
["XPEHH-SS40",5,"s72583.1","OAR5_56980426.1",52.313713,52.568265,0.2545519999999968,3.637749916013]
["XPEHH-SS41",5,"OAR5_57228881.1","OAR5_57411524_X.1",52.8021,52.920375,0.11827499999999702,4.52392471356606]
["XPEHH-SS42",5,"OAR5_57903283.1","OAR5_57947887.1",53.322188,53.367185,0.044997000000002174,3.32139943182983]
["XPEHH-SS43",6,"s20660.1","s32980.1",36.626596,36.914376,0.2877799999999979,-4.21098299418531]
["XPEHH-SS44",6,"s17946.1","OAR14_57922732.1",37.164263,38.580198,1.4159350000000046,-4.83743095786612]
["XPEHH-SS45",6,"OAR6_125261176.1",null,110.324736,null,null,3.43595327030149]
["XPEHH-SS46",6,"OAR6_126025923.1","s14915.1",110.962428,111.075112,0.11268400000000156,3.75563062169051]
["XPEHH-SS47",6,"s47717.1",null,112.817744,null,null,3.59072510229734]
["XPEHH-SS48",6,"s28191.1","s67130.1",113.074027,113.195177,0.12115000000000009,3.6302833478351]
["XPEHH-SS49",6,"s33707.1","s42042.1",113.378122,113.421328,0.04320599999999786,3.92403144431182]
["XPEHH-SS50",6,"s20354.1",null,114.534219,null,null,3.31357689072464]
["XPEHH-SS51",8,"s01845.1","OAR8_29488228_X.1",26.898589,26.991459,0.09286999999999779,4.34231168300638]
["XPEHH-SS52",8,"OAR8_30146675.1",null,27.64443,null,null,3.36977592193509]
["XPEHH-SS53",8,"OAR8_31775836.1",null,29.356455,null,null,3.43171686630467]
["XPEHH-SS54",8,"OAR8_32481629.1",null,30.060859,null,null,3.36123898038818]
["XPEHH-SS55",8,"s50528.1","OAR8_36294417_X.1",32.778561,33.477406,0.6988449999999986,4.84588060683695]
["XPEHH-SS56",8,"OARUn.1694_11043.1","OAR8_37243185.1",33.675906,34.592484,0.9165780000000012,5.51713665373984]
["XPEHH-SS57",8,"OAR8_37553450.1","OAR8_37938538.1",34.905866,35.299284,0.39341799999999694,4.02588031239013]
["XPEHH-SS58",8,"s75673.1","OAR8_38626893.1",35.449315,35.938854,0.4895390000000006,4.55778573671054]
["XPEHH-SS59",8,"OAR8_38921990.1","OAR8_38931107.1",36.257232,36.270845,0.013612999999999431,4.5975702987763]
["XPEHH-SS60",8,"OAR8_39847976.1","s27049.1",37.07504,37.422641,0.3476009999999974,4.19388367962454]
["XPEHH-SS61",8,"OAR8_40695411.1","s08950.1",37.769019,37.920624,0.15160499999999644,4.13782111085168]
["XPEHH-SS62",10,"OAR10_29381795.1","OAR10_29448537.1",29.344224,29.41514,0.07091600000000042,3.71561149416043]
["XPEHH-SS63",10,"OAR10_29867192.1","OAR10_30038002.1",29.842383,30.004053,0.16166999999999732,3.57172492502991]
["XPEHH-SS64",10,"OAR10_46387946.1","OAR10_46516536.1",45.835303,45.956052,0.12074899999999644,4.08288326149464]
["XPEHH-SS65",10,"OAR10_46757659.1","OAR10_47249054.1",46.200425,46.573078,0.3726529999999997,3.74998561346126]
["XPEHH-SS66",10,"OAR10_47747943.1",null,47.057956,null,null,3.37056211667099]
["XPEHH-SS67",10,"OAR10_52584066.1","OAR10_52602545.1",51.626765,51.646916,0.020150999999998476,4.45281936935195]
["XPEHH-SS68",10,"OAR10_57100846.1","OAR10_57171204.1",55.957589,56.030207,0.07261799999999852,4.18922254787547]
["XPEHH-SS69",10,"OAR10_60531037.1",null,59.095153,null,null,3.33651726653786]
["XPEHH-SS70",10,"OAR10_62073309_X.1","OAR10_62361045.1",60.578383,60.816903,0.23852000000000118,4.06346609518427]
["XPEHH-SS71",10,"OAR10_62506415.1",null,60.977553,null,null,3.56274376289928]
["XPEHH-SS72",10,"OAR10_62783841.1","OAR10_63158988.1",61.237051,61.605181,0.36813000000000073,3.66692440407182]
["XPEHH-SS73",10,"OAR10_67514738.1",null,65.354102,null,null,3.3489379833023]
["XPEHH-SS74",10,"OAR10_67990675.1",null,65.768192,null,null,3.33967898776341]
["XPEHH-SS75",10,"OAR10_80412561.1","OAR10_80432942.1",73.497864,73.519933,0.022068999999987682,3.39054201538479]
["XPEHH-SS76",11,"s74720.1","s45020.1",25.361127,25.403051,0.04192400000000163,-4.01473194725627]
["XPEHH-SS77",11,"s56248.1","s31301.1",26.571629,26.623188,0.05155899999999747,-3.45819258042593]
["XPEHH-SS78",13,"s03976.1",null,70.710313,null,null,3.59299958025779]
["XPEHH-SS79",13,"s23278.1","s17021.1",70.948811,70.978118,0.029306999999988648,3.52319852448692]
["XPEHH-SS80",13,"s48404.1",null,71.132891,null,null,3.65247723844033]
["XPEHH-SS81",13,"s50652.1","s35292.1",71.918973,71.970009,0.05103600000001052,3.74653459819216]
["XPEHH-SS82",13,"s43133.1","OAR13_78419787.1",72.63885,72.821453,0.1826030000000003,3.78227045507748]
["XPEHH-SS83",13,"s46848.1",null,74.644297,null,null,3.32856623647819]
["XPEHH-SS84",13,"s50954.1","s04113.1",74.805028,74.821959,0.016931000000013796,3.67855646118911]
["XPEHH-SS85",13,"OAR13_80723652.1","OAR13_80794248.1",75.040572,75.096591,0.05601900000000626,3.99589323161889]
["XPEHH-SS86",15,"OAR15_14317931.1","OAR15_14326736.1",14.322038,14.330823,8.785000000001375E-3,3.41875288582054]
["XPEHH-SS87",15,"OAR15_15434412.1","OAR15_15614422.1",15.316335,15.495123,0.17878799999999906,3.79305932562989]
["XPEHH-SS88",15,"s67678.1","OAR15_16007880.1",15.749862,15.846414,0.09655199999999908,3.78628718720357]
["XPEHH-SS89",15,"OAR15_16320281.1","OAR15_16378477.1",16.098633,16.172572,0.07393899999999931,3.85879809187773]
["XPEHH-SS90",15,"OAR15_16943137.1","s64562.1",16.541422,16.604021,0.06259899999999874,3.65025603443088]
["XPEHH-SS91",15,"OAR15_18050001.1",null,17.579589,null,null,3.53746773268941]
["XPEHH-SS92",15,"s68324.1","s52443.1",17.763157,18.1819,0.4187429999999992,5.41943043764611]
["XPEHH-SS93",15,"OAR15_19924298.1","s57471.1",19.230401,20.659847,1.4294459999999987,5.52356860217809]
["XPEHH-SS94",15,"OAR15_22331105.1","OAR15_22404265.1",21.40681,21.4826,0.07579000000000136,3.85882845839038]
["XPEHH-SS95",15,"s19862.1","s00941.1",74.618189,74.636302,0.0181129999999996,-3.42945523299751]
["XPEHH-SS96",24,"s54035.1",null,18.027756,null,null,3.81171838859283]
["XPEHH-SS97",25,"s44881.1","s74537.1",7.608913,7.821104,0.2121909999999998,-4.23387000651671]
["XPEHH-SS98",26,"s23193.1",null,39.837586,null,null,3.45397766899515]
["(1) Most extreme REHH value: A positive value indicates that the selection is related to Churra population (maximum value indicated). "]
["A negative estimate (highlighted in bold font) indicates that the selection region is related to the Merino populations (minimum value indicated)."]

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