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["Additional file 5. Maximum-parsimony phylogenetic trees of complete mtDNA sequences belonging to haplogroups  U1a, U7, U2e, U3, U4, U5a2a, U5b1b1a, U8a, K1a, K1a17, K1b2, K2a3, K2a5, H11, H15, H20, H8, H49, H7c, H97, JT, HV, N1a1, W3, and X2e2,  "]
["constructed using the program mtPhyl. Numbers along links refer to substitutions scored relative to rCRS (Andrews et al. 1999). Transversions are further specified; ins and del denote insertions and deletions of nucleotides, respectively;"]
["back mutations are underlined; symbol < denotes parallel mutation; heteroplasmies are labeled using the IUPAC code. Newly sequenced Siberian (marked in yellow) and European (marked in green) samples labeled as in Additioanal files 4 and 7,   "]
["for published data the accession number in indicated. Coalescence time estimates expressed in kya are shown along links next to clade labels and were calculated by computing the averaged distance (r) and the standard error (s)  "]
["(Forster et al. 1996, Saillard et al. 2000). Calculations were obtained using the entire mtDNA genomes but excluding the length variation in the poly-C stretches at nps 303-315 and 16184-16194 and hot spot mutations such as 16182C, 16183C, and 16519. "]
["Values of mutation rates based on mtDNA complete genome variability data (Soares et al. 2009; marked in blue) and coding region substitutions (Perego et al. 2009; marked in red) were used. Established haplogroup labels are shown in black;  "]
["blue are redefined and red are newly identified haplogroups in the present study."]
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