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["Dayhoff+F",206,44110.164845847656,42541.92749629324,-21062.151322345275,"n/a","n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["Dayhoff+I",188,44117.491027891956,42685.83218956668,-21152.57538332089,0,"n/a",0.0871,0.0409,0.0404,0.0469,0.0335,0.0383,0.0495,0.0886,0.0336,0.0369,0.0854,0.0805,0.0148,0.0398,0.0507,0.0696,0.0585,0.0105,0.0299,0.0647]
["Dayhoff+I+F",207,44119.80703345892,42543.98456095161,-21062.152362264605,0,"n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["Dayhoff",187,44173.064429142956,42748.99585461275,-21185.182137832693,"n/a","n/a",0.0871,0.0409,0.0404,0.0469,0.0335,0.0383,0.0495,0.0886,0.0336,0.0369,0.0854,0.0805,0.0148,0.0398,0.0507,0.0696,0.0585,0.0105,0.0299,0.0647]
["mtREV24+G+F",207,44221.92036788904,42646.09789538173,-21113.209029479665,"n/a",3.2089807355321303,0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["mtREV24+G+I+F",208,44231.56047566165,42648.15315130762,-21113.209029479665,0,3.2089807355321303,0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["cpREV+G",188,44790.12931675674,43358.47047843147,-21488.894527753284,"n/a",2.1560605941249364,0.0756,0.0621,0.041,0.0371,0.0091,0.0382,0.0495,0.0838,0.0246,0.0806,0.1011,0.0504,0.022,0.0506,0.0431,0.0622,0.0543,0.0181,0.0307,0.066]
["cpREV+G+I",189,44799.76942452935,43360.52059249846,-21488.894527753284,0,2.1560605941249364,0.0756,0.0621,0.041,0.0371,0.0091,0.0382,0.0495,0.0838,0.0246,0.0806,0.1011,0.0504,0.022,0.0506,0.0431,0.0622,0.0543,0.0181,0.0307,0.066]
["mtREV24+I+F",207,44847.314416263835,43271.491943756526,-21425.906053667062,0,"n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["mtREV24+F",206,44916.41018542435,43348.17283586993,-21465.27399213362,"n/a","n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["cpREV+G+F",207,45029.82939011013,43454.00691760282,-21517.16354059021,"n/a",2.299458557833834,0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["cpREV+G+I+F",208,45039.46949788274,43456.062173528706,-21517.16354059021,0,2.299458557833834,0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["cpREV",187,45862.62275731011,44438.55418277991,-22029.96130191627,"n/a","n/a",0.0756,0.0621,0.041,0.0371,0.0091,0.0382,0.0495,0.0838,0.0246,0.0806,0.1011,0.0504,0.022,0.0506,0.0431,0.0622,0.0543,0.0181,0.0307,0.066]
["cpREV+I+F",207,45966.14004117018,44390.317568662875,-21985.318866120237,0,"n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["mtREV24+G",188,46080.28366020673,44648.62482188146,-22133.97169947828,"n/a",2.979294391142278,0.072,0.019,0.039,0.019,0.006,0.025,0.024,0.056,0.028,0.087,0.168,0.023,0.053,0.06,0.055,0.072,0.088,0.029,0.033,0.044]
["mtREV24+G+I",189,46089.923767979344,44650.67493594845,-22133.97169947828,0,2.979294391142278,0.072,0.019,0.039,0.019,0.006,0.025,0.024,0.056,0.028,0.087,0.168,0.023,0.053,0.06,0.055,0.072,0.088,0.029,0.033,0.044]
["cpREV+I",188,46190.096736124506,44758.43789779923,-22188.878237437166,0,"n/a",0.0756,0.0621,0.041,0.0371,0.0091,0.0382,0.0495,0.0838,0.0246,0.0806,0.1011,0.0504,0.022,0.0506,0.0431,0.0622,0.0543,0.0181,0.0307,0.066]
["cpREV+F",206,46745.10171682803,45176.864367273614,-22379.619757835462,"n/a","n/a",0.08731862840783396,0.07918537315375106,0.02147179387077884,0.05764851324093955,0.014704925499381873,0.037087643958617994,0.07515127854772594,0.08172294879302493,0.022577916585334114,0.04580649359099486,0.10566725226104497,0.04483050296050491,0.022838180753464766,0.04190253106903507,0.04190253106903507,0.046717418179452144,0.051076842995640574,0.014574793415316546,0.038714295009434574,0.06910013663868828]
["mtREV24",187,46840.23198612947,45416.163411599264,-22518.76591632595,"n/a","n/a",0.072,0.019,0.039,0.019,0.006,0.025,0.024,0.056,0.028,0.087,0.168,0.023,0.053,0.06,0.055,0.072,0.088,0.029,0.033,0.044]
["mtREV24+I",188,46843.51242642745,45411.853588102174,-22515.586082588638,0,"n/a",0.072,0.019,0.039,0.019,0.006,0.025,0.024,0.056,0.028,0.087,0.168,0.023,0.053,0.06,0.055,0.072,0.088,0.029,0.033,0.044]

{"sheet":"Caption","index":1,"n_rows":9,"n_cols":1,"rows_kept":9,"flags":["formulas_cached_only"]}
["Table. Maximum Likelihood fits of 48 different amino acid substitution models "]
["NOTE.-- Models with the lowest BIC scores (Bayesian Information Criterion) are considered to describe the substitution pattern the best. For each model, AICc value (Akaike Information Criterion, corrected), Maximum Likelihood value (lnL), and the number of parameters (including branch lengths) are also presented [1]. Non-uniformity of evolutionary rates among sites may be modeled by using a discrete Gamma distribution (+G) with 5 rate categories and by assuming that a certain fraction of sites are evolutionarily invariable (+I). Whenever applicable, estimates of gamma shape parameter and/or the estimated fraction of invariant sites are shown. They are followed by amino acid frequencies (f) and rates of amino acid substitutions (r) for each amino acid pair Relative values of instantaneous r should be considered when evaluating them. For simplicity, sum of r values is made equal to 1 for each model. For estimating ML values, a tree topology was automatically computed. The analysis involved 95 amino acid sequences. There were a total of 170 positions in the final dataset. Evolutionary analyses were conducted in MEGA6 [2]. "]
[""]
["Abbreviations: GTR: General Time Reversible; JTT: Jones-Taylor-Thornton; rtREV: General Reverse Transcriptase; cpREV: General Reversible Chloroplast; mtREV24: General Reversible Mitochondrial. "]
[""]
[""]
["1. Nei M. and Kumar S. (2000). Molecular Evolution and Phylogenetics. Oxford University Press, New York."]
["2. Tamura K., Stecher G., Peterson D., Filipski A., and Kumar S. (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution30: 2725-2729."]
["Disclaimer: Although utmost care has been taken to ensure the correctness of the caption, the caption text is provided \"as is\" without any warranty of any kind. Authors advise the user to carefully check the caption prior to its use for any purpose and report any errors or problems to the authors immediately (www.megasoftware.net). In no event shall the authors and their employers be liable for any damages, including but not limited to special, consequential, or other damages. Authors specifically disclaim all other warranties expressed or implied, including but not limited to the determination of suitability of this caption text for a specific purpose, use, or application. "]

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["From\\To","A","R","N","D","C","Q","E","G","H","I","L","K","M","F","P","S","T","W","Y","V"]
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["R",0.0025483511818290908,"-",0.0013245530910456806,0.00044815985612690597,0.0005439060060488444,0.005946052857448058,0.0013598427152441935,0.002595976726768684,0.0027847207295682913,0.0004833147806410381,0.0022882054100127093,0.017703579382308134,0.0007105890448511321,0.00021052752234204254,0.0016584330064095335,0.004538846945507305,0.001804071374585985,0.0008930180437977834,0.000717776683595586,0.0009522688523073913]
["N",0.0023555838747018935,0.0014900010877491256,"-",0.01651854726316017,0.0002731480308079696,0.00302374074546899,0.0029329836486583836,0.004997609852790504,0.005155072304322923,0.0014326231863651339,0.0006047430554887699,0.00996433808882613,0.0002061790191190907,0.0001971041919191492,0.0004761354036980411,0.014734985334174841,0.006605857248462834,5.51781142607671e-05,0.002043087959324112,0.0007420277753333001]
["D",0.0034142955787547467,0.000345454477134974,0.011319115951914767,"-",3.119624920274889e-05,0.0012081780001895522,0.019118188936421577,0.003843287898306457,0.0012126770463990356,0.00010193917500971028,0.00038991738183359045,0.0015874573635591058,0.00010791943310588757,9.578365832337905e-05,0.0010348203720583257,0.0039736924842687085,0.0012198217211817723,9.956377799978261e-05,0.0006127589524119851,0.0005759954401893454]
["C",0.004745098269825189,0.0012387032648970774,0.000552998924551997,9.216964933320888e-05,"-",0.0001935682611306264,6.611613080491492e-05,0.0013616661963775144,0.0003244121795297834,0.0004397753769373192,0.0017668853366934261,0.00024491911037292203,0.00040615876089647804,0.0008158246384766946,0.0002670230197004346,0.005219086327541324,0.0016692605512868876,0.0005501722185941272,0.0010231110996161232,0.0037892018934017175]
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["G",0.0065454856878278764,0.0013711449918136615,0.002346538700420521,0.0026334654924900325,0.00031579832011341223,0.0006465184113676318,0.0017579267249987769,"-",0.0003249828964563215,7.870928501060372e-05,0.00028186383774380286,0.001235805394997265,0.00018108962838767683,0.00010234395262494306,0.0005944828060074115,0.004974975786781964,0.0007348652552102436,0.00025855032944971173,0.00019490983880093488,0.0007080015635877136]
["H",0.0014643810143851973,0.005012002632712008,0.008247972205023903,0.0028315023506541863,0.00025637954099557336,0.0084114659975939,0.0017650734105503758,0.0011074077555923093,"-",0.00035720198277231695,0.0022964401190661457,0.0029457290955573283,0.00042036613156935153,0.0013925119352458431,0.0016992147660908484,0.0027442748305485237,0.0015401507722422976,0.0002014561608546465,0.0072870889734478715,0.00044752465493767384]
["I",0.0008932403548027856,0.0004384995158327019,0.0011554570375335547,0.0001199837088339542,0.00017519694265733445,0.00022314495251586573,0.000394476605652498,0.000135201783804023,0.00018006249332945377,"-",0.014579573069332953,0.0010713017327235778,0.004428385119330262,0.002171603762943831,0.0002438968404358231,0.0011843662080827761,0.004744882814014643,0.00016302765911770946,0.0007904643350545231,0.029573198124875615]
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