Chr Pos.GRCh37 Pos.GRCh38 Ref.GRCh37 Alt.GRCh37 Ref.GRCh38 GeneSymbol Class Functional Consequences AAS Freq 1KG Freq ESP6500 RegulomeDBAnno RegulomeDBScore GERP GAD OMIM chr2 172180771 171324261 A G G METTL8 B stop_lost */R 0.00137363 0.997591 Motifs|PWM|Sox7, Motifs|PWM|Sox30, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Cll 5 5.63 NA NA chr7 75621827 75992509 A G G TMEM120A A stop_lost */Q 0 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Cll 5 4.88 NA NA chr9 139937799 137043347 G A G NPDC1 C stop_gained R/* 0.00412088 NA Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hmec, Protein_Binding|ChIP-seq|ELF1 4 0.961 NA NA chr10 1142208 1096268 T C T WDR37 B stop_lost */R 0.00503663 0.991235 Motifs|PWM|HSF2, Motifs|PWM|HSF2, Motifs|PWM|HSF1, Motifs|PWM|HSF1 6 -1.13 NA NA chr11 65713207 65945736 T C C TSGA10IP B stop_lost */R 0.000457875 0.999283 Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|FAIRE|H1hesc, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|8988t, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|NANOG, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1 4 3.28 NA NA chr11 118529017 118658307 T G G TREH A stop_lost */S 0 NA Motifs|PWM|Ascl2, Motifs|PWM|Zfp410, Chromatin_Structure|DNase-seq|Osteobl 5 2.25 NA Autosomal recessive inheritance|Diarrhea chr1 877831 942451 T C T SAMD11 B missense_variant W/R 0.003663 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891 5 2.51 NA NA chr1 3807593 3891029 G C G C1orf174 B missense_variant T/R 0.00274725 0.994075 Chromatin_Structure|DNase-seq|Werirb1 5 4.36 NA NA chr1 11884555 11824498 A G A CLCN6 B missense_variant E/G 0.000457875 0.999154 Chromatin_Structure|DNase-seq|Phte 5 5.79 CARDIOVASCULAR NA chr1 12175729 12115672 C T T TNFRSF8 A missense_variant R/C 0 NA NA NA 3.83 NA NA chr1 15812432 15485937 A G A CELA2B C missense_variant Q/R 0.00595238 0.992849 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Nhbe, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2 5 -2.83 NA NA chr1 17248532 16922037 A G G CROCC A missense_variant R/G 0 NA Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm18507, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|ZNF263 4 0.306 NA NA chr1 17991052 17664557 T C C ARHGEF10L A missense_variant W/R 0 0.999769 Motifs|Footprinting|HEN1, Motifs|Footprinting|HEN1, Motifs|Footprinting|HEN1, Motifs|Footprinting|HEN1, Motifs|PWM|HEN1, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12892, Protein_Binding|ChIP-seq|IKZF1, Protein_Binding|ChIP-seq|CTCF 2b 3.15 CANCER NA chr1 22846709 22520216 G A G ZBTB40 B missense_variant V/M 0.00320513 0.996079 Motifs|PWM|N-Myc, Motifs|PWM|Myc, Motifs|PWM|USF 6 5.79 METABOLIC|METABOLIC|METABOLIC|METABOLIC NA chr1 27875824 27549313 C T C AHDC1 B missense_variant A/T 0.00320513 0.994925 Protein_Binding|ChIP-seq|MAFF 5 -2.09 NA NA chr1 33065947 32600346 G C C ZBTB8OS A missense_variant H/Q 0 0.999923 Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Nha 5 5.59 NA NA chr1 33957152 33491552 T G T ZSCAN20 B missense_variant Y/D 0.00137363 0.997704 NA NA 5.61 NA NA chr1 40098328 39632656 T C T HEYL B missense_variant H/R 0.00549451 0.992542 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Helas3, Protein_Binding|ChIP-seq|CREBBP 4 4.16 NA NA chr1 40533266 40067594 T G T CAP1 A missense_variant C/G 0 NA Chromatin_Structure|DNase-seq|Werirb1, Protein_Binding|ChIP-seq|BCL3 4 4.56 NA NA chr1 40533287 40067615 T G T CAP1 B missense_variant C/G 0.000457875 NA Chromatin_Structure|DNase-seq|Werirb1, Protein_Binding|ChIP-seq|BCL3 4 4.88 NA NA chr1 40533315 40067643 T G T CAP1 A missense_variant I/S 0 NA Chromatin_Structure|DNase-seq|Werirb1, Protein_Binding|ChIP-seq|BCL3 4 4.88 NA NA chr1 40533320 40067648 T G T CAP1 B missense_variant C/G 0.000915751 NA Chromatin_Structure|DNase-seq|Werirb1, Protein_Binding|ChIP-seq|BCL3 4 2.96 NA NA chr1 40533326 40067654 T G T CAP1 B missense_variant Y/D 0.000915751 NA Chromatin_Structure|DNase-seq|Werirb1, Protein_Binding|ChIP-seq|BCL3 4 4.88 NA NA chr1 40533347 40067675 T G T CAP1 A missense_variant S/A 0 NA Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|FAIRE|UrotsaUt189, Protein_Binding|ChIP-seq|BCL3 4 4.88 NA NA chr1 41978566 41512895 T G T HIVEP3 B missense_variant D/A 0.003663 0.995403 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST 4 2.66 HEMATOLOGICAL|HEMATOLOGICAL|HEMATOLOGICAL NA chr1 41978825 41513154 C G C HIVEP3 B missense_variant A/P 0.003663 0.994772 Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPAR=HNF-4=COUP=RAR, Motifs|Footprinting|PPARdirectrepeat1, Motifs|Footprinting|VDR=CAR=PXR, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPAR=HNF-4=COUP=RAR, Motifs|Footprinting|PPARdirectrepeat1, Motifs|Footprinting|VDR=CAR=PXR, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|PWM|VDR=CAR=PXR, Motifs|PWM|PPARgamma:RXRalpha, Motifs|PWM|PPARG::RXRA, Motifs|PWM|PPAR=HNF-4=COUP=RAR, Motifs|PWM|PPARdirectrepeat1, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19238 5 2.9 HEMATOLOGICAL|HEMATOLOGICAL|HEMATOLOGICAL NA chr1 42048745 41583074 T C T HIVEP3 B missense_variant H/R 0.00778388 0.988851 Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Protein_Binding|ChIP-seq|USF1 4 2.77 NA NA chr1 47059934 46594262 T C C MKNK1 C missense_variant Q/R 0.00503663 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Medullo 5 -4.18 NA NA chr1 47904909 47439237 G C G FOXD2 B missense_variant A/P 0.00137363 NA Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Progfib, Protein_Binding|ChIP-seq|CREBBP 4 3.48 NA NA chr1 48697733 48232061 T G T SLC5A9 B missense_variant I/M 0.000457875 0.999077 Chromatin_Structure|FAIRE|Nhbe, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|FAIRE|Urotsa, Protein_Binding|ChIP-seq|BCL3, Protein_Binding|ChIP-seq|PBX3 5 4.05 NA NA chr1 55277599 54811926 T C C C1orf177 A missense_variant Y/H 0 0.999923 Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|PWM|GATA-1, Motifs|Footprinting|, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Protein_Binding|ChIP-seq|IKZF1 2b 1.29 NA NA chr1 62330080 61864408 T G T INADL C missense_variant I/M 0.00732601 0.987467 NA NA 4.57 NA NA chr1 65113568 64647885 T C T CACHD1 B missense_variant M/T 0.00137363 0.996617 NA NA 2.3 NA NA chr1 85624549 85158866 C T C SYDE2 B missense_variant V/I 0.000457875 0.998908 NA NA 2.56 NA NA chr1 90178743 89713184 A G A LRRC8C B missense_variant D/G 0.00778388 0.984161 NA NA 4.84 NA NA chr1 91859795 91394238 T C T HFM1 B missense_variant I/V 0.00228938 0.999077 Motifs|PWM|TCF11:MafG 6 1.52 NA NA chr1 92647532 92181975 C A C KIAA1107 B missense_variant T/N 0.00641026 0.98664 Motifs|PWM|Mafb 6 3.82 NA NA chr1 93580581 93115024 G C C MTF2 B missense_variant C/S 0.000457875 0.998693 NA NA 5.23 NA NA chr1 109704618 109161996 A G A KIAA1324 B missense_variant I/V 0.00137363 0.995464 Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Protein_Binding|ChIP-seq|PBX3, Protein_Binding|ChIP-seq|CREBBP 4 5.55 NA NA chr1 110466709 109924087 T C T CSF1 B missense_variant F/S 0.00228938 0.996848 NA NA 4.57 NA NA chr1 114424601 113881979 C T C BCL2L15 B missense_variant D/N 0.00137363 0.999846 NA NA -0.702 NA NA chr1 151820298 151847822 G C G THEM5 B missense_variant L/V 0.0018315 0.99531 Motifs|Footprinting|C/EBPdelta, Motifs|Footprinting|C/EBPdelta, Motifs|PWM|C/EBPdelta, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huvec 5 3.13 NA NA chr1 152085505 152113029 A C A TCHH C missense_variant L/R 0.00778388 0.990155 Chromatin_Structure|DNase-seq|T47d 5 4.58 DEVELOPMENTAL NA chr1 154574820 154602344 T C T ADAR B missense_variant R/G 0.00228938 0.995694 Protein_Binding|ChIP-seq|MEIS1 5 -2.82 NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL Infantile onset|Autosomal dominant inheritance|Hyperpigmented/hypopigmented macules chr1 158619728 158649938 A C A SPTA1 C missense_variant S/A 0.00320513 0.993966 NA NA -1.91 HEMATOLOGICAL Heterogeneous|Autosomal dominant inheritance|Autosomal recessive inheritance|Microspherocytosis|Spherocytosis|Elliptocytosis|Pyropoikilocytosis|Hemolytic anemia chr1 159409734 159439944 G T G OR10J1 C missense_variant M/I 0.00869963 0.989236 NA NA -5.45 OTHER|HEMATOLOGICAL|CARDIOVASCULAR NA chr1 160585554 160615764 C G C SLAMF1 B missense_variant S/T 0.00778388 NA Motifs|PWM|T3R, Motifs|Footprinting|T3R, Motifs|Footprinting|T3R, Motifs|Footprinting|T3R 6 0.0926 NA NA chr1 161190276 161220486 C G C FCER1G C missense_variant P/A 0.003663 NA Chromatin_Structure|DNase-seq|Hepg2 5 0.637 CANCER NA chr1 169519049 169549811 T C C F5 C missense_variant Q/R 0.00595238 0.978625 Motifs|PWM|Gm397, Protein_Binding|ChIP-seq|RFX3 5 5.71 CARDIOVASCULAR|CARDIOVASCULAR|CARDIOVASCULAR|REPRODUCTION|CARDIOVASCULAR|CARDIOVASCULAR|CARDIOVASCULAR|CARDIOVASCULAR|REPRODUCTION|METABOLIC|HEMATOLOGICAL|CARDIOVASCULAR|CARDIOVASCULAR|HEMATOLOGICAL|CARDIOVASCULAR|CARDIOVASCULAR|CARDIOVASCULAR|OTHER|OTHER|OTHER|OTHER|HEMATOLOGICAL|CARDIOVASCULAR|OTHER|OTHER|CARDIOVASCULAR|CARDIOVASCULAR|REPRODUCTION|CARDIOVASCULAR|CARDIOVASCULAR|HEMATOLOGICAL|HEMATOLOGICAL|UNKNOWN|HEMATOLOGICAL|CARDIOVASCULAR|REPRODUCTION Prolonged partial thromboplastin time|Autosomal dominant inheritance|Autosomal recessive inheritance|Bruising susceptibility|Reduced factor V activity|Prolonged bleeding time|Resistance to activated protein C|Menorrhagia|Deep venous thrombosis|Prolonged whole-blood clotting time|Adult onset|Epistaxis|Abnormal bleeding|Preeclampsia chr1 180885430 180916294 T C T KIAA1614 B missense_variant L/P 0.00320513 0.996008 Chromatin_Structure|DNase-seq|Medullo 5 -8.68 NA NA chr1 180913597 180944461 A G A KIAA1614 B missense_variant N/D 0.00412088 0.996248 Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Th2, Chromatin_Structure|FAIRE|K562, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21 4 4.94 NA NA chr1 182778367 182809232 G A G NPL B missense_variant R/Q 0.00549451 NA NA NA 0.614 NA NA chr1 186277088 186307956 G C C PRG4 A missense_variant C/S 0 0.999923 Motifs|PWM|Oct-1, Motifs|PWM|Octamer, Motifs|PWM|Pou3f3, Protein_Binding|ChIP-seq|RFX3 5 -1.22 NA Generalized morning stiffness|Flattened metacarpal heads|Wrist flexion contracture|Congenital finger flexion contractures|Arthritis|Coxa vara|Flattened metatarsal heads|Autosomal recessive inheritance|Constrictive pericarditis|Arthropathy|Synovial hypertrophy chr1 196874356 196905226 G T G CFHR4 B missense_variant E/D 0.00595238 NA NA NA 2.28 NA NA chr1 197070901 197101771 A G A ASPM B missense_variant Y/H 0.00274725 0.995693 Motifs|PWM|Sox11, Motifs|PWM|Sry, Motifs|PWM|Tcf3, Protein_Binding|ChIP-seq|FOXA1 5 4.83 NA Small cerebral cortex|Sloping forehead|Delayed speech and language development|Seizures|Intellectual disability|Cortical dysplasia|Autosomal recessive inheritance|Attention deficit hyperactivity disorder|Short stature|Motor delay|Cortical gyral simplification|Microcephaly|Ventriculomegaly|Hearing impairment|Agenesis of corpus callosum|Congenital onset chr1 201181223 201212095 A G A IGFN1 B missense_variant N/S 0.00228938 0.994744 Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Medullo 5 0.908 NA NA chr1 203008174 203039046 G C G PPFIA4 B missense_variant R/P 0.000457875 NA Motifs|Footprinting|, Motifs|Footprinting|, Chromatin_Structure|DNase-seq|Gm12864 5 5.32 NA NA chr1 207195779 207022434 A G A C1orf116 B missense_variant S/P 0.00503663 0.988698 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hepg2, Protein_Binding|ChIP-seq|TFAP2A, Protein_Binding|ChIP-seq|TFAP2C 4 -0.771 NA NA chr1 207782916 207609571 A T A CR1 B missense_variant T/S 0.00778388 0.981543 NA NA 2.54 HEMATOLOGICAL|RENAL|CARDIOVASCULAR|INFECTION|IMMUNE|CARDIOVASCULAR|INFECTION|NEUROLOGICAL NA chr1 212274413 212101071 A C A DTL B missense_variant K/T 0.00503663 0.99062 NA NA 2.71 NA NA chr1 222802006 222628664 A G A MIA3 B missense_variant K/E 0.00320513 0.992691 Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi1 6 1.63 CARDIOVASCULAR|CARDIOVASCULAR NA chr1 223283910 223110568 A G G TLR5 A missense_variant F/L 0 NA Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|H7es 5 2.58 IMMUNE|IMMUNE|INFECTION NA chr1 223900408 223712706 C G C CAPN2 C missense_variant D/E 0.00961538 0.98444 Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Sknshra, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|IKZF1 4 2.09 NA NA chr1 227923081 227735380 G A G JMJD4 B missense_variant A/V 0.00228938 0.999917 Motifs|PWM|Smad3, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Sknmc, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Th2, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Gm12865, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Monocd14, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Caco2, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|BCLAF1, Protein_Binding|ChIP-seq|RXRA, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|SIX5, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TRIM28, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|TFAP2A, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|TCF4, Protein_Binding|ChIP-seq|ELK4, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|NR2C2, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|JUN, Protein_Binding|ChIP-seq|NRF1, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|GATA2, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|IKZF1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|RFX5, Protein_Binding|ChIP-seq|WRNIP1, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|BRCA1, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|ZZZ3, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|SIX5, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|ELK4, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|SP2, Protein_Binding|ChIP-seq|ZBTB33, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|MEF2C, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|ZNF143, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|TFAP2C, Protein_Binding|ChIP-seq|ZEB1, Protein_Binding|ChIP-seq|NRF1, Protein_Binding|ChIP-seq|BCLAF1, Protein_Binding|ChIP-seq|RFX5, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|RFX5, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|ZBTB33, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|NRF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NRF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 3a 1.99 NA NA chr1 228444565 228256864 T A T OBSCN A missense_variant V/D 0 NA Chromatin_Structure|DNase-seq|Caco2 5 4.6 NA NA chr1 245133539 244970237 A G A RP11-156E8.1 B missense_variant F/L 0.00503663 NA Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|PWM|E2F, Motifs|PWM|E2F, Motifs|PWM|E2F, Motifs|PWM|E2F-1, Motifs|PWM|E2F-1, Motifs|PWM|E2F-4:DP-1, Motifs|PWM|E2F-1, Motifs|PWM|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Motifs|Footprinting|E2F-1, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Sknshra, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|GATA1 2a -0.521 NA NA chr1 247695612 247532310 G A G OR2C3 B missense_variant P/S 0.00228938 0.998078 Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|H1hesc, Protein_Binding|ChIP-seq|CTCF 4 4.04 CANCER NA chr1 247978319 247815017 A G A OR14A16 B missense_variant I/T 0.0018315 0.99877 NA NA 3.84 NA NA chr2 21235475 21012603 T C C APOB A missense_variant Y/C 0 0.999692 Protein_Binding|ChIP-seq|POLR2A 5 1.93 RENAL|RENAL|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|METABOLIC|METABOLIC|OTHER|METABOLIC|METABOLIC|CARDIOVASCULAR|OTHER|METABOLIC|METABOLIC|CARDIOVASCULAR|OTHER|OTHER|OTHER|OTHER|METABOLIC|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|METABOLIC|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|METABOLIC|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|CARDIOVASCULAR|OTHER|CARDIOVASCULAR|AGING|CARDIOVASCULAR|CARDIOVASCULAR Acanthocytosis|Retinitis pigmentosa|Ataxia|Fat malabsorption|Autosomal dominant inheritance|Corneal arcus|Xanthelasma|Coronary artery disease|Reduced tendon reflexes|Hypobetalipoproteinemia|Hypercholesterolemia chr2 24108652 23885782 T C C ATAD2B A missense_variant Q/R 0 0.999501 NA NA 4.94 NA NA chr2 26203678 25980809 T C C KIF3C A missense_variant Q/R 0 0.999846 NA NA 5.32 NA NA chr2 26667615 26444747 T C T DRC1 B missense_variant W/R 0.000457875 0.998001 Motifs|Footprinting|Lyf-1, Motifs|Footprinting|Lyf-1, Motifs|PWM|Lyf-1, Chromatin_Structure|DNase-seq|Fibrobl 5 5.51 NA Autosomal recessive inheritance|Sinusitis|Recurrent otitis media|Atelectasis|Bronchiectasis chr2 29416572 29193706 T C T ALK B missense_variant I/V 0.00686813 0.990312 Motifs|PWM|NFE2L2 6 -0.134 PSYCH NA chr2 32667182 32442114 G C C BIRC6 A missense_variant V/L 0 NA Chromatin_Structure|DNase-seq|Rptec, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|HEY1 4 5.64 NA NA chr2 33585796 33360729 T C T LTBP1 A missense_variant V/A 0 0.999923 Motifs|PWM|Tal1::Gata1, Chromatin_Structure|FAIRE|K562, Protein_Binding|ChIP-seq|USF1 5 4.89 DEVELOPMENTAL|DEVELOPMENTAL NA chr2 38179134 37951991 G A A RMDN2 A missense_variant G/D 0 NA NA NA -3.03 NA NA chr2 42510018 42282878 A G A EML4 B missense_variant K/E 0.00732601 0.987621 NA NA 5.89 HEMATOLOGICAL|IMMUNE NA chr2 69741854 69514722 T G T AAK1 A missense_variant K/Q 0 NA Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Aosmc, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 4 4.52 NEUROLOGICAL NA chr2 100343557 99727095 C T T AFF3 A missense_variant S/N 0 NA Motifs|PWM|Ets, Motifs|Footprinting|Ets, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Htr8 5 5.26 IMMUNE NA chr2 109099572 108483116 C G C GCC2 B missense_variant Q/E 0.00228938 0.990005 Motifs|PWM|Zec 6 5.13 NA NA chr2 131520663 130763090 T C T AMER3 C missense_variant S/P 0.00915751 0.977011 Motifs|PWM|Hoxa3, Chromatin_Structure|DNase-seq|Hmec 5 0.659 NA NA chr2 160136337 159279826 G A A WDSUB1 A missense_variant P/L 0 0.999923 NA NA 5.79 NA NA chr2 178936614 178071887 C T C PDE11A C missense_variant R/Q 0.00915751 0.992619 NA NA 5.28 PHARMACOGENOMIC|CANCER Agitation|Pigmented micronodular adrenocortical disease|Kyphosis|Onset|Striae distensae|Hypertension|Primary hypercorticolism|Depression|Autosomal dominant inheritance|Round face|Decreased circulating ACTH level|Bruising susceptibility|Anxiety|Paradoxical increased cortisol secretion on dexamethasone suppression test|Mood changes|Psychosis|Truncal obesity|Mental deterioration|Increased circulating cortisol level|Osteoporosis|Osteopenia|Thin skin chr2 179444768 178580041 C G C TTN B missense_variant A/P 0.00503663 0.995617 NA NA 1.82 CARDIOVASCULAR EMG: myopathic abnormalities|Sudden death|Dilated cardiomyopathy|Autosomal dominant inheritance|Autosomal recessive inheritance|Incomplete penetrance|Facial palsy|Proximal muscle weakness|Childhood onset|Distal muscle weakness|Arrhythmia|Centrally nucleated skeletal muscle fibers|Ptosis|Calf muscle hypertrophy|Myopathy|Slow progression|Diaphragmatic weakness|Generalized muscle weakness|Rimmed vacuoles|Muscular dystrophy|Motor delay|Foot dorsiflexor weakness|Infantile onset|Elevated serum creatine phosphokinase|Adult onset|Steppage gait|Congenital onset|Neck flexor weakness chr2 179621477 178756750 C T T TTN B missense_variant A/T 0.000457875 0.999169 NA NA 1.92 CARDIOVASCULAR EMG: myopathic abnormalities|Sudden death|Dilated cardiomyopathy|Autosomal dominant inheritance|Autosomal recessive inheritance|Incomplete penetrance|Facial palsy|Proximal muscle weakness|Childhood onset|Distal muscle weakness|Arrhythmia|Centrally nucleated skeletal muscle fibers|Ptosis|Calf muscle hypertrophy|Myopathy|Slow progression|Diaphragmatic weakness|Generalized muscle weakness|Rimmed vacuoles|Muscular dystrophy|Motor delay|Foot dorsiflexor weakness|Infantile onset|Elevated serum creatine phosphokinase|Adult onset|Steppage gait|Congenital onset|Neck flexor weakness chr2 187532417 186667690 G A G ITGAV B missense_variant V/I 0.00503663 0.99085 NA NA 3.39 IMMUNE NA chr2 188250301 187385574 T A A CALCRL A missense_variant N/Y 0 0.998531 NA NA -1.99 NA NA chr2 189875421 189010695 T G T COL3A1 C missense_variant H/Q 0.00320513 0.994925 Motifs|PWM|Sox11, Motifs|PWM|Sox4, Motifs|PWM|Sox4, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Sknmc 5 1.42 CARDIOVASCULAR|OTHER|OTHER|CARDIOVASCULAR Talipes equinovarus|Joint dislocation|Cerebral aneurysm|Uterine prolapse|Autosomal dominant inheritance|Osteolytic defects of the phalanges of the hand|Mitral valve prolapse|Abnormality of the urinary system|Hypermobility of distal interphalangeal joints|Short stature|Fragile skin|Acroosteolysis (feet)|Keratoconus|Inguinal hernia|Absent earlobe|Molluscoid pseudotumors|Striae distensae|Thin vermilion border|Bruising susceptibility|Periodontitis|Hemoptysis|Soft skin|Alopecia of scalp|Spontaneous pneumothorax|Joint laxity|Premature delivery because of cervical insufficiency or membrane fragility|Hyperextensible skin|Premature loss of teeth|Cigarette-paper scars|Osteoarthritis chr2 202357949 201493226 A C A ALS2CR11 A missense_variant C/G 0 NA NA NA 2.1 NA NA chr2 209184980 208320256 G A G PIKFYVE B missense_variant S/N 0.00686813 0.992151 NA NA 5.83 NA Speckled corneal dystrophy|Autosomal dominant inheritance|Photophobia chr2 215876166 215011442 A T A ABCA12 B missense_variant S/T 0.0018315 0.99777 NA NA -2.88 NEUROLOGICAL Leukonychia|Short finger|Clubbing|Autosomal recessive inheritance|Everted lower lip vermilion|Abnormality of the nervous system|Congenital ichthyosiform erythroderma|Proptosis|Palmoplantar keratoderma|Abnormality of the abdomen|Ectropion|Rigidity|Premature birth chr2 216235089 215370366 C T C FN1 B missense_variant V/I 0.000457875 0.999846 Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hae, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|FOXA2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 5.6 OTHER|RENAL|HEMATOLOGICAL Generalized distal tubular acidosis|Nephrotic syndrome|Hypertension|Slow progression|Autosomal dominant inheritance|Renal cell carcinoma|End stage renal disease|Microhematuria|Proteinuria chr2 216272900 215408177 T G T FN1 B missense_variant T/P 0.000457875 0.999923 Chromatin_Structure|DNase-seq|Werirb1 5 5.93 OTHER|RENAL|HEMATOLOGICAL Generalized distal tubular acidosis|Nephrotic syndrome|Hypertension|Slow progression|Autosomal dominant inheritance|Renal cell carcinoma|End stage renal disease|Microhematuria|Proteinuria chr2 220037393 219172671 A G A CNPPD1 B missense_variant L/P 0.00732601 0.995617 Motifs|PWM|RREB1, Motifs|PWM|RREB-1, Motifs|PWM|Foxk1, Motifs|PWM|Foxl1 6 2.79 NA NA chr2 220250147 219385425 A G G DNPEP A missense_variant,splice_region_variant V/A 0 0.999919 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12891 5 2.29 NA NA chr2 242203916 241264501 A C C HDLBP A missense_variant S/A 0 NA NA NA 5.64 NA NA chr3 9970031 9928347 A G A IL17RC B missense_variant Q/R 0.00228938 0.995386 NA NA 1.66 NA NA chr3 9976159 9934475 A G A CRELD1 B missense_variant M/V 0.00641026 0.991465 Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|FAIRE|K562, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCFL, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A 4 0.328 NA Atrioventricular canal defect with right ventricle aorta and pulmonary atresia|Right aortic arch with mirror image branching|Pulmonary artery atresia|Autosomal dominant inheritance|Incomplete penetrance|Dextrocardia chr3 24006477 23964986 T A A NR1D2 A missense_variant L/M 0 NA Protein_Binding|ChIP-seq|USF1 5 5.78 NA NA chr3 38739574 38698083 T C T SCN10A A missense_variant M/V 0 NA NA NA 5.38 CARDIOVASCULAR NA chr3 39229900 39188409 T C T XIRP1 C missense_variant Q/R 0.00732601 0.994618 Motifs|Footprinting|AR, Motifs|PWM|AR, Motifs|Footprinting|AR, Motifs|PWM|CTCF, Motifs|PWM|AR, Chromatin_Structure|DNase-seq|Hmec 5 3.06 NA NA chr3 49928691 49891258 T C C MST1R A missense_variant S/G 0 NA Chromatin_Structure|DNase-seq|Hepatocytes 5 5.07 NA NA chr3 51978220 51944204 A G G PARP3 B missense_variant H/R 0.00457875 0.992043 Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hpdlf 5 3.14 NA NA chr3 51990119 51956103 A C A GPR62 B missense_variant T/P 0.00274725 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Ag04450, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 4 2.77 NA NA chr3 51990315 51956299 A G A GPR62 B missense_variant H/R 0.00274725 0.995002 Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12892 5 4.59 NA NA chr3 52430698 52396682 A G G DNAH1 B missense_variant H/R 0.0018315 0.995485 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Ips 5 4.49 NA NA chr3 110611137 110892290 G A G RP11-553A10.1 B missense_variant S/L 0.00137363 NA Motifs|PWM|AR 6 -6.69 NA NA chr3 112190137 112471290 G T G BTLA B missense_variant R/S 0.00961538 0.99062 NA NA -4.86 IMMUNE NA chr3 113373930 113655083 A G G KIAA2018 A missense_variant V/A 0 0.998206 Protein_Binding|ChIP-seq|ESR1, Protein_Binding|ChIP-seq|ESR1 5 5.57 NA NA chr3 121263720 121544873 C A C POLQ B missense_variant R/I 0.00915751 0.988621 Motifs|PWM|HOXA5(Hox-1.3), Motifs|PWM|Pbx, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21 5 -2.11 NA NA chr3 121350966 121632119 C G C HCLS1 B missense_variant V/L 0.0018315 0.996002 Motifs|PWM|FOXJ2, Motifs|PWM|Dbx1, Motifs|PWM|Hoxd8, Motifs|PWM|Tlx2 6 3.01 NA NA chr3 122186188 122467341 C T C KPNA1 B missense_variant S/N 0.00549451 0.992771 Motifs|PWM|Hoxc9, Motifs|PWM|Cdx2, Motifs|PWM|Six4, Motifs|PWM|Zbtb7b 6 4.56 NA NA chr3 123451773 123732926 G C G MYLK B missense_variant L/V 0.000915751 0.998616 Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Fibrop 5 5.29 INFECTION|IMMUNE|IMMUNE|UNKNOWN|IMMUNE|UNKNOWN Autosomal dominant inheritance|Aortic dissection|Aortic aneurysm chr3 124837684 125118840 T C T SLC12A8 B missense_variant I/V 0.000457875 0.998799 NA NA 1.6 NA NA chr3 125786879 126068036 T C T SLC41A3 B missense_variant T/A 0.00732601 0.990697 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Panislets 5 -4.75 NA NA chr3 129281980 129563137 C T C PLXND1 A missense_variant S/N 0 0.999846 Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HNF3, Motifs|Footprinting|HNF3, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|PWM|FOXJ2, Motifs|PWM|FOXJ2, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|Freac-7, Motifs|Footprinting|HNF3, Motifs|Footprinting|HNF3, Motifs|Footprinting|HNF3, Motifs|Footprinting|HNF3, Motifs|Footprinting|HNF3, Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|Freac-7, Motifs|Footprinting|HFH8(FOXF1A), Motifs|Footprinting|HNF3, Motifs|Footprinting|Freac-7, Motifs|Footprinting|HNF3, Motifs|PWM|Freac-7, Motifs|PWM|HFH8(FOXF1A), Motifs|PWM|HNF3, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Chorion 5 4.09 NA NA chr3 129293183 129574340 T C T PLXND1 B missense_variant H/R 0.00732601 0.989824 Motifs|PWM|Pax-5, Motifs|Footprinting|Pax-5, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Chorion 5 3.29 NA NA chr3 132360883 132642039 C T T ACAD11 A missense_variant R/H 0 NA Chromatin_Structure|FAIRE|Mcf7, Protein_Binding|ChIP-seq|AR 5 5.49 NA NA chr3 133485133 133766289 A G A TF B missense_variant I/V 0.00778388 0.999616 NA NA 4.87 NEUROLOGICAL|CARDIOVASCULAR|HEMATOLOGICAL|HEMATOLOGICAL|HEMATOLOGICAL|HEMATOLOGICAL Abnormality of metabolism/homeostasis|Syndactyly|Autosomal dominant inheritance|Autosomal recessive inheritance|Congestive heart failure|Hypochromic anemia|Abnormality of the liver|Abnormality of the face|Atransferrinemia chr3 140401693 140682851 A G A TRIM42 B missense_variant K/R 0.000915751 0.999231 NA NA 1.87 NA NA chr3 175165079 175447291 C T C NAALADL2 A missense_variant P/S 0 0.999501 NA NA 4.53 IMMUNE NA chr3 179096508 179378720 C G G MFN1 A missense_variant P/R 0 NA Motifs|PWM|GATA-3 6 -0.792 NA NA chr3 184037533 184319745 A G A EIF4G1 B missense_variant T/A 0.0018315 0.997309 Motifs|Footprinting|SP1, Motifs|Footprinting|SP1, Motifs|Footprinting|SP1, Motifs|PWM|SP1, Motifs|Footprinting|SP1, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Htr8 5 -1.84 NA Lewy bodies|Resting tremor|Bradykinesia|Autosomal dominant inheritance|Parkinsonism|Rigidity|Insidious onset chr4 648643 654854 G A G PDE6B B missense_variant V/I 0.000457875 0.998924 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Progfib 5 4.67 UNKNOWN|UNKNOWN Retinitis pigmentosa|Abnormality of metabolism/homeostasis|Autosomal dominant inheritance|Autosomal recessive inheritance|Abnormal rod and cone electroretinograms|Congenital stationary night blindness chr4 1954945 1953218 A G A WHSC1 B missense_variant M/V 0.00274725 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|FAIRE|Nhbe 5 -6.77 NA Delayed skeletal maturation|Intellectual disability, severe|Talipes equinovarus|Autosomal dominant inheritance|Single transverse palmar crease|Stenosis of the external auditory canal|Rieger anomaly|Sensorineural hearing impairment|Epicanthus|Precocious puberty|Conductive hearing impairment|Pseudoepiphyses of the metacarpals|Gastroesophageal reflux|Prominent glabella|Ectopia pupillae|Preauricular skin tag|Cryptorchidism|Immunodeficiency|Aplasia of the uterus|Short thumb|Decreased muscle mass|Convex nasal ridge|Cleft palate|Seizures|Abnormal form of the vertebral bodies|Downturned corners of mouth|Global developmental delay|Vertebral fusion|Aplasia cutis congenita of scalp|Proptosis|Hip dislocation|Hypertelorism|Hypospadias|Radioulnar synostosis|EEG abnormality|Hypodontia|Failure to thrive|Intrauterine growth retardation|Accessory spleen|Ventricular septal defect|Hip dysplasia|Malrotation of small bowel|Wide nasal bridge|Defect in the atrial septum|Short upper lip|Rib fusion|Small for gestational age|Agenesis of corpus callosum|Craniofacial asymmetry|Cleft upper lip|Kyphosis|Abnormality of the nasolacrimal system|Iris coloboma|Short hallux|Preauricular pit|High forehead|Hemangioma|Micrognathia|Short stature|Preaxial foot polydactyly|Metatarsus adductus|Periventricular cysts|Webbed neck|Generalized hypotonia|Cavum septum pellucidum|Rib segmentation abnormalities|Split hand|Ventriculomegaly|Short philtrum|Sporadic|Preaxial hand polydactyly|Nystagmus|Ptosis|Hydrocephalus|Low posterior hairline|Absent septum pellucidum|Scoliosis|Hyperconvex fingernails|Abnormality of the pinna|Abnormal sternal ossification|Genitourinary tract malformation|Microcephaly|Biliary tract abnormality|Stereotypic behavior|Highly arched eyebrow|Tethered cord|Decreased fetal movement|Sacral dimple|Strabismus|Severe postnatal growth retardation chr4 2461888 2460161 A G A RP11-503N18.3 B missense_variant H/R 0.000457875 NA Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Lncap 5 3.75 NA NA chr4 4276132 4274405 T C C LYAR A missense_variant H/R 0 0.999462 Motifs|PWM|CLOCK:BMAL, Chromatin_Structure|DNase-seq|Hl60 5 1.24 NA NA chr4 8616179 8614452 T C T CPZ B missense_variant I/T 0.0018315 0.994233 Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes 5 3.91 NA NA chr4 10446385 10444761 C T C ZNF518B C missense_variant S/N 0.00732601 0.990235 Motifs|PWM|AREB6 6 1.61 NA NA chr4 15690233 15688610 C A C FAM200B B missense_variant H/N 0.00549451 NA NA NA 2.83 NA NA chr4 36081878 36080256 C T C ARAP2 B missense_variant R/Q 0.00732601 0.992542 NA NA 4.53 NA NA chr4 54966830 54100663 G A G GSX2 B missense_variant G/S 0.00686813 0.994974 Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Caco2, Protein_Binding|ChIP-seq|SUZ12 4 1.42 NA NA chr4 69094575 68228857 T G T TMPRSS11B B missense_variant D/A 0.00320513 0.996002 NA NA 4.62 NA NA chr4 70513139 69647421 C T T UGT2A1 A missense_variant R/K 0 NA NA NA 0.266 NA NA chr4 72618296 71752579 T C T GC B missense_variant H/R 0.00595238 0.993003 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Sknmc, Chromatin_Structure|DNase-seq|Lncap 5 0.982 IMMUNE|METABOLIC|OTHER|IMMUNE NA chr4 76794345 75873192 T G T PPEF2 B missense_variant M/L 0.000457875 0.999 NA NA 3.63 NA NA chr4 81967188 81046034 C T C BMP3 B missense_variant L/F 0.000457875 0.998924 NA NA -1.34 DEVELOPMENTAL NA chr4 95539267 94618116 G A G PDLIM5 B missense_variant A/T 0.00274725 0.994541 Motifs|PWM|BRCA1:USF2, Motifs|PWM|Irf6 6 1.63 PSYCH NA chr4 100140306 99219149 A T T ADH6 A missense_variant C/S 0 0.999692 Chromatin_Structure|FAIRE|Hepg2, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huh75, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|HNF4G, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|TCF4, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|HNF4A 4 0.836 NA NA chr4 102965043 102043886 T C T BANK1 B missense_variant C/R 0.003663 0.990618 Motifs|PWM|BCL6, Motifs|PWM|Foxl1 6 3.64 IMMUNE|IMMUNE NA chr4 103911069 102989912 C A C SLC9B1 B missense_variant Q/H 0.00274725 0.995918 NA NA 0.0199 NA NA chr4 115589302 114668146 A G A UGT8 C missense_variant I/M 0.00732601 0.984315 NA NA 1.96 NA NA chr4 126373789 125452634 G A G FAT4 B missense_variant S/N 0.003663 0.992465 NA NA 5.27 NEUROLOGICAL NA chr4 169336662 168415511 T C C DDX60L A missense_variant Y/C 0 NA NA NA 0.475 NA NA chr4 187519206 186598052 C G C FAT1 B missense_variant K/N 0.00137363 0.995207 Motifs|PWM|MRF-2, Protein_Binding|ChIP-seq|TAL1 5 -0.147 NA NA chr5 43509348 43509246 T A A C5orf34 C missense_variant T/S 0.00641026 0.994618 NA NA 5.26 NA NA chr5 66480004 67184176 T C T CD180 B missense_variant I/V 0.00732601 0.999923 NA NA -0.748 NA NA chr5 75923307 76627482 A G A IQGAP2 B missense_variant K/E 0.000457875 0.999616 NA NA -4.28 CHEMDEPENDENCY|OTHER NA chr5 94772540 95436836 C T T FAM81B A missense_variant P/S 0 NA Motifs|PWM|TFE, Motifs|PWM|Sox17, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|FAIRE|Gm18507 5 4.26 NA NA chr5 112312676 112976979 T C C DCP2 A missense_variant F/S 0 NA Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Protein_Binding|ChIP-seq|SMARCB1, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|ELF1 4 4.52 NA NA chr5 112439941 113104244 T C T MCC B missense_variant K/R 0.00228938 0.993387 Protein_Binding|ChIP-seq|RFX3 5 5.26 NA NA chr5 115813726 116478030 A G G SEMA6A A missense_variant Y/H 0 NA Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 5 5.98 NEUROLOGICAL NA chr5 128863471 129527778 A G A ADAMTS19 B missense_variant S/G 0.0018315 0.996079 NA NA 4.41 NA NA chr5 131066725 131731032 C A C FNIP1 B missense_variant G/C 0.00228938 0.996771 NA NA 5.16 NA NA chr5 132150948 132815256 T G G SOWAHA A missense_variant F/L 0 NA Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|UrotsaUt189 5 1.48 NA NA chr5 138713959 139378270 A C C SLC23A1 A missense_variant S/A 0 0.998844 Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Huvec, Protein_Binding|ChIP-seq|POLR2A 4 5.3 NA NA chr5 140531175 141151594 T C C PCDHB6 A missense_variant V/A 0 NA NA NA 3.29 NA NA chr5 140750044 141370477 T C C PCDHGB3 A missense_variant V/A 0 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Stellate 5 -0.164 NA NA chr5 149360877 149981314 T C T SLC26A2 B missense_variant I/T 0.00274725 0.993233 NA NA 4.37 NA Stillbirth|Kyphoscoliosis|Talipes equinovarus|Hypoplasia of the femoral head|Malar flattening|Autosomal recessive inheritance|Laryngotracheal stenosis|Micromelia|Hypoplastic ilia|Abdominal distention|Irregular epiphyses|Inguinal hernia|Hitchhiker thumb|Coronal cleft vertebrae|Spinal cord compression|Hip contracture|Hydrops fetalis|Platyspondyly|Hoarse voice|Cleft palate|Short finger|Midface retrusion|Arthralgia|Cystic lesions of the pinnae|Cervical kyphosis|Small sacroiliac notches|Narrow chest|Flat acetabular roof|Short ribs|Neonatal short-limb short stature|Hip dysplasia|Flat face|Pulmonary hypoplasia|Horizontal sacrum|Breech presentation|Hypoplastic cervical vertebrae|Respiratory insufficiency|Sandal gap|Depressed nasal bridge|Disproportionate short-limb short stature|Brachydactyly syndrome|Short neck|Absent or minimally ossified vertebral bodies|Short stature|Micrognathia|Limited elbow flexion|Flattened epiphyses|Dumbbell-shaped femur|Costal cartilage calcification|Lumbar hyperlordosis|Flat capital femoral epiphysis|Abnormality of metabolism/homeostasis|Thoracic hypoplasia|Scoliosis|Umbilical hernia|Multiple epiphyseal dysplasia|Edema|Polyhydramnios|Short long bones|Short metacarpal|Hearing impairment|Hypertrophic auricular cartilage|Short middle phalanx of finger|Ulnar deviation of finger|Glabellar hemangioma chr5 149585025 150205462 A C A SLC6A7 A missense_variant M/L 0 NA Motifs|PWM|SRF, Motifs|PWM|YY1 6 4.77 NA NA chr5 150051958 150672396 T C T MYOZ3 C missense_variant S/P 0.00503663 0.988698 Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|Footprinting|NF-muE1, Motifs|PWM|NF-muE1, Motifs|Footprinting|NF-muE1, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hsmm, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1 2a 4.91 NA NA chr5 150923405 151543844 A G A FAT2 B missense_variant F/S 0.00137363 0.996694 Motifs|PWM|ISL1, Motifs|PWM|Arid5a 6 4.7 NA NA chr5 150942919 151563358 A G A FAT2 B missense_variant Y/H 0.00320513 0.996079 NA NA 1.9 NA NA chr5 151771817 152392256 C T C NMUR2 B missense_variant A/T 0.0018315 0.997924 Protein_Binding|ChIP-seq|PAX5 5 1.97 NA NA chr5 176025938 176598937 T C T GPRIN1 B missense_variant M/V 0.00320513 0.996848 Chromatin_Structure|DNase-seq|Hae 5 -3.95 NA NA chr5 176885178 177458177 A G A DBN1 B missense_variant S/P 0.00320513 0.998691 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Cll 5 2.85 NA NA chr5 177422876 177995875 T C T PROP1 B missense_variant N/S 0.00137363 0.999692 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12892 5 1.48 NA Hypothyroidism|Panhypopituitarism|Autosomal recessive inheritance|Prolactin deficiency|Hypoglycemic seizures|Adrenal insufficiency|Short stature|Neonatal hypoglycemia|Hypogonadism chr6 12122645 12122412 A G G HIVEP1 A missense_variant T/A 0 0.999918 NA NA -7.96 NA NA chr6 27277402 27309623 C T C POM121L2 B missense_variant G/S 0.00869963 0.983574 NA NA 0.985 NA NA chr6 35027927 35060150 T C T ANKS1A B missense_variant L/S 0.00641026 0.987006 Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|CTCF 4 5.68 DEVELOPMENTAL NA chr6 42713618 42745880 A G A TBCC C missense_variant V/A 0.00686813 0.990389 Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|Footprinting|SOX4, Motifs|PWM|SOX4, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Mcf7, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|SPDEF 2b 4.1 NA NA chr6 42853842 42886104 A G A RPL7L1 B missense_variant I/V 0.00228938 0.99654 Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|Gm18507 5 -3.03 NA NA chr6 121620608 121299462 G T G TBC1D32 B missense_variant T/K 0.00732601 0.989966 Motifs|PWM|Zfp105, Chromatin_Structure|DNase-seq|Hl60, Protein_Binding|ChIP-seq|CEBPB 3a 4.83 NEUROLOGICAL NA chr6 132271952 131950812 G C G CTGF A missense_variant H/D 0 NA Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hipe, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|SIN3A 4 5.28 NA NA chr6 133070995 132749856 G T G VNN2 A missense_variant L/M 0 0.999462 Motifs|PWM|Tcf7 6 -10.4 NA NA chr6 142758631 142437494 A G A GPR126 A missense_variant Q/R 0 0.998233 NA NA 5.29 CARDIOVASCULAR|DEVELOPMENTAL|DEVELOPMENTAL|DEVELOPMENTAL NA chr6 152540278 152219143 A C A SYNE1 B missense_variant F/V 0.00686813 0.99308 Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Protein_Binding|ChIP-seq|GATA3, Protein_Binding|ChIP-seq|FOXA1 4 3.99 CANCER|OTHER Childhood onset|Left ventricular septal hypertrophy|Autosomal dominant inheritance|Phenotypic variability|Elevated serum creatine phosphokinase|Neck muscle weakness|Proximal amyotrophy|Proximal muscle weakness chr6 167571048 167157560 T C T GPR31 C missense_variant H/R 0.00915751 0.985222 Motifs|PWM|Elk-1, Motifs|PWM|c-Ets-1, Motifs|PWM|GABP, Motifs|PWM|NERF1a, Motifs|PWM|Ets, Motifs|PWM|GABP, Motifs|PWM|Ehf, Chromatin_Structure|DNase-seq|Hmec 5 -6.81 NA NA chr7 4841470 4801839 T C T RADIL B missense_variant S/G 0.003663 0.994708 Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Phte 5 0.203 NA NA chr7 5427720 5388089 A G A TNRC18 B missense_variant S/P 0.00137363 0.998464 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepatocytes 5 3.42 NA NA chr7 32209425 32169813 A G G PDE1C A missense_variant S/P 0 NA NA NA 5.65 NA NA chr7 46732428 46692830 A G A AC011294.3 B missense_variant V/A 0.00686813 NA Motifs|PWM|FOXP1 6 -0.113 NA NA chr7 48545976 48506380 A G G ABCA13 A missense_variant K/E 0 NA NA NA 5.04 NA NA chr7 50611735 50544037 T C T DDC B missense_variant M/V 0.00778388 0.993311 NA NA 0.418 CHEMDEPENDENCY|CANCER|INFECTION Hypotension|Muscular hypotonia of the trunk|Limb hypertonia|Feeding difficulties in infancy|Autosomal recessive inheritance|Temperature instability|Irritability|Miosis|Constipation|Gastroesophageal reflux|Intermittent hypothermia|Limb dystonia|Babinski sign|Hyperreflexia|Abnormality of the face|Ptosis|Emotional lability|Myoclonus|Global developmental delay|Diarrhea|Hyperhidrosis|Choreoathetosis|Infantile onset|Decreased CSF homovanillic acid (HVA)|Sleep disturbance chr7 56136260 56068567 C A C SUMF2 B missense_variant D/E 0.00137363 0.998616 NA NA 0.954 NA NA chr7 72738749 73324751 A G G TRIM50 B missense_variant W/R 0.000457875 NA Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST 5 1.87 NA NA chr7 73814749 74400419 G C G CLIP2 B missense_variant R/P 0.00915751 0.982162 Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gm19240 5 4.72 NA NA chr7 76144455 76515138 A C A UPK3B C missense_variant R/S 0.00824176 0.986891 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Helas3 5 -6.95 NA NA chr7 76144560 76515243 T C T UPK3B C missense_variant W/R 0.00824176 0.986257 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Hepg2 5 -5.85 NA NA chr7 91714911 92085597 C T C AKAP9 B missense_variant P/S 0.00137363 0.997386 Motifs|PWM|LXR 6 2.47 NA Prolonged QT interval chr7 113519719 113879664 A T A PPP1R3A B missense_variant N/K 0.00320513 0.996077 Motifs|PWM|Tlx2 6 1.78 METABOLIC|METABOLIC|METABOLIC|METABOLIC Acanthosis nigricans|Hypertension|Autosomal dominant inheritance|Insulin-resistant diabetes mellitus|Loss of subcutaneous adipose tissue in limbs|Loss of gluteal subcutaneous adipose tissue|Abnormality of the neck|Prominent superficial veins|Decreased subcutaneous fat|Hirsutism|Lipodystrophy|Hyperglycemia|Polycystic ovaries|Oligomenorrhea|Abnormality of the face|Maternal diabetes|Primary amenorrhea|Abnormality of the musculature|Hepatic steatosis|Cirrhosis|Hypoalphalipoproteinemia|Hyperuricemia|Hyperinsulinemia|Hypertriglyceridemia|Preeclampsia chr7 128455767 128815713 C G C CCDC136 B missense_variant Q/E 0.00824176 0.994275 Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Nb4, Protein_Binding|ChIP-seq|SPI1, Protein_Binding|ChIP-seq|SPI1, Protein_Binding|ChIP-seq|MAFK, Protein_Binding|ChIP-seq|MAFK 4 0.915 NA NA chr7 139653196 139953397 A C C TBXAS1 B missense_variant E/D 0.00320513 0.993234 Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Sknshra, Protein_Binding|ChIP-seq|GATA2 4 -0.525 CANCER Hematuria|Leukopenia|Increased bone mineral density|Gastrointestinal hemorrhage|Autosomal dominant inheritance|Autosomal recessive inheritance|Bruising susceptibility|Prolonged bleeding time|Thrombocytopenia|Bone marrow hypocellularity|Impaired platelet aggregation|Refractory anemia|Diaphyseal dysplasia|Myelofibrosis|Phenotypic variability|Petechiae|Epistaxis|Hyperostosis cranialis interna chr7 141747658 142047858 A G A MGAM B missense_variant N/D 0.00412088 0.992608 Motifs|PWM|Gm397 6 5.37 NA NA chr7 141857846 142158046 A G A RP11-1220K2.2 B missense_variant H/R 0.003663 NA Motifs|PWM|Nkx3-1, Protein_Binding|ChIP-seq|HNF4A 5 2.18 NA NA chr7 143017807 143320714 G T G CLCN1 B missense_variant G/W 0.00915751 0.981855 Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Lncap, Protein_Binding|ChIP-seq|TFAP2A, Protein_Binding|ChIP-seq|TFAP2C, Protein_Binding|ChIP-seq|STAT1 4 4.99 OTHER Muscle stiffness|EMG: myotonic runs|Autosomal dominant inheritance|Autosomal recessive inheritance|Myalgia|Myotonia with warm-up phenomenon|Dysphagia|Childhood onset|Muscle weakness|Muscle hypertrophy|Phenotypic variability|Percussion myotonia|Muscle hypertrophy of the lower extremities chr7 158672476 158879785 C G C WDR60 B missense_variant N/K 0.003663 0.990964 NA NA 2.63 DEVELOPMENTAL Pancreatic fibrosis|Depressed nasal bridge|Syndactyly|Autosomal recessive inheritance|Acetabular spurs|Femoral bowing|Short stature|Preaxial polydactyly|Postaxial polydactyly|Narrow chest|Failure to thrive|Macrocephaly|Short ribs|Ventricular septal defect|Polyhydramnios|Pulmonary hypoplasia|Ambiguous genitalia chr8 6302418 6444897 A G A MCPH1 B missense_variant D/G 0.00915751 0.992661 NA NA -11.5 NA Small cerebral cortex|Microcephaly|Heterogeneous|Seizures|Increased rate of premature chromosome condensation|Intellectual disability|Autosomal recessive inheritance|Short stature chr8 10530218 10672708 C T C C8orf74 B missense_variant L/F 0.00915751 0.999917 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|JUN, Protein_Binding|ChIP-seq|ESR1, Protein_Binding|ChIP-seq|STAT3, Protein_Binding|ChIP-seq|JUND 4 1.21 NA NA chr8 11301753 11444244 A C A FAM167A B missense_variant H/Q 0.00274725 0.993849 Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|UrotsaUt189 5 2.03 NA NA chr8 12878637 13021128 A G A KIAA1456 B missense_variant H/R 0.00274725 0.997434 NA NA 0.659 NA NA chr8 17230644 17373135 G C G MTMR7 B missense_variant P/A 0.00641026 0.989543 Motifs|PWM|Whn, Motifs|PWM|Srf 6 -1.49 NA NA chr8 25234858 25377342 A G A DOCK5 B missense_variant K/R 0.00274725 0.994464 Motifs|PWM|Freac-2, Motifs|PWM|Freac-7, Motifs|PWM|FOXfactors, Motifs|PWM|FOXF2, Motifs|PWM|Foxa2, Motifs|PWM|Foxj1, Motifs|PWM|Foxj3, Motifs|PWM|Foxk1, Motifs|PWM|Foxl1, Chromatin_Structure|FAIRE|Astrocy 6 5.47 NA NA chr8 40011079 40153560 G A G C8orf4 B missense_variant V/I 0.00549451 0.988928 Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|A549, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Astrocy, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huvec, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|JUN, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|JUN 4 -12.2 NA NA chr8 74917084 74004849 A G A LY96 B missense_variant R/G 0.00915751 0.971545 NA NA 3.26 NA NA chr8 77895865 76983629 A G A PEX2 B missense_variant C/R 0.00824176 0.989159 NA NA 3.59 DEVELOPMENTAL Talipes equinovarus|Poor suck|Malar flattening|Jaundice|Single transverse palmar crease|Autosomal recessive inheritance|Optic nerve dysplasia|Retinal dystrophy|Brushfield spots|Sensorineural hearing impairment|Epicanthus|Generalized neonatal hypotonia|Elevated levels of phytanic acid|Turricephaly|Opacification of the corneal stroma|Death in childhood|Joint contracture of the hand|Multiple small renal cortical cysts|Cryptorchidism|Dolichocephaly|Muscular hypotonia|Intrahepatic biliary dysgenesis|Cleft palate|Seizures|Intellectual disability|Round face|Very long chain fatty acid accumulation|Global developmental delay|Apnea|Hypertelorism|Malformation of the heart and great vessels|Failure to thrive|Intrauterine growth retardation|Cubitus valgus|Clitoromegaly|Hypoplasia of the thymus|Palpebral edema|Macrogyria|Feeding difficulties in infancy|High forehead|Hepatosplenomegaly|Micrognathia|Metatarsus adductus|Decreased liver function|Epiphyseal stippling|Polymicrogyria|Hepatomegaly|Areflexia|Large fontanelles|Retinitis pigmentosa|Pigmentary retinopathy|Low-set ears|Visual impairment|Upslanted palpebral fissure|Renal cysts|Stippled chondral calcification|Abnormality of the helix|Neonatal hypotonia chr8 142459814 NA NA NA NA MROH5 B missense_variant G/E 0.0018315 NA Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|PWM|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|FAIRE|UrotsaUt189 5 4.04 NA NA chr8 144732418 NA NA NA NA ZNF623 B missense_variant N/D 0.00320513 0.99408 Chromatin_Structure|DNase-seq|Sknmc, Protein_Binding|ChIP-seq|SETDB1, Protein_Binding|ChIP-seq|SETDB1 4 2.26 NA NA chr8 144811338 NA NA NA NA FAM83H B missense_variant Q/H 0.000457875 0.999202 Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|A549 5 2.28 NA Autosomal dominant inheritance|Amelogenesis imperfecta|Anterior open bite|Dental malocclusion chr8 144890873 NA NA NA NA SCRIB A missense_variant V/E 0 NA Motifs|Footprinting|, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hsmmt, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-exo|CTCF 4 -0.446 NA NA chr8 146033347 NA NA NA NA ZNF517 B missense_variant V/A 0.00228938 0.995338 Chromatin_Structure|DNase-seq|Melano 5 -0.838 NA NA chr9 4118208 4118208 A G A GLIS3 B missense_variant S/P 0.0018315 0.998715 Motifs|PWM|Mafk, Chromatin_Structure|DNase-seq|Gm12865 5 -2.61 IMMUNE|IMMUNE|CHEMDEPENDENCY|METABOLIC|METABOLIC Congenital hypothyroidism|Intrauterine growth retardation|Congenital glaucoma|Diabetes mellitus|Autosomal recessive inheritance|Cholestasis|Renal cysts chr9 5557672 5557672 T C T PDCD1LG2 B missense_variant F/S 0.0018315 0.99877 Chromatin_Structure|DNase-seq|Gm12892 5 0.724 NA NA chr9 20866974 20866975 C G G FOCAD A missense_variant T/S 0 NA NA NA 4.54 NA NA chr9 33927899 33927901 G A G UBAP2 B missense_variant A/V 0.00274725 0.997155 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Medullo 5 -1.44 NA NA chr9 114454580 111692300 A G A C9orf84 B missense_variant I/T 0.0018315 0.997386 NA NA 3.2 NA NA chr9 117166338 114404058 G C C DFNB31 B missense_variant H/Q 0.003663 0.993541 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H7es 5 4.91 NA Retinitis pigmentosa|Autosomal recessive inheritance|Hearing impairment|Sensorineural hearing impairment chr9 126125318 123363039 C A C CRB2 B missense_variant T/N 0.00274725 0.997231 Motifs|Footprinting|, Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|FAIRE|K562, Protein_Binding|ChIP-seq|AR 5 -8.1 NA NA chr9 126133547 123371268 T C T CRB2 B missense_variant V/A 0.003663 0.997232 Motifs|PWM|Sox13, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|H9es 5 -6.22 NA NA chr9 130494957 127732678 T C T TOR2A B missense_variant K/E 0.00732601 0.988973 Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Wi38 5 5.72 NA NA chr9 131085373 128323094 G C G COQ4 B missense_variant G/A 0.00137363 0.997049 Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|Footprinting|ZBRK1, Motifs|PWM|ZBRK1, Motifs|Footprinting|ZBRK1, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Gm12865, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F1 2b -2.65 NA NA chr9 131235321 128473042 A G A ODF2 C missense_variant,splice_region_variant R/G 0.00961538 0.985853 Motifs|PWM|C/EBPbeta, Motifs|PWM|C/EBPdelta, Motifs|PWM|Cebpa 6 -10.1 NA NA chr9 131418828 128656549 A C A WDR34 B missense_variant W/G 0.00641026 0.998413 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm12892, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF7, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|POLR2A 4 2.12 NA NA chr9 131483749 128721470 T A T ZDHHC12 B missense_variant Q/L 0.0018315 0.995911 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|8988t 5 -0.423 NA NA chr9 131860901 129098622 G T G CRAT B missense_variant L/M 0.00228938 0.996002 Motifs|PWM|Jundm2, Motifs|Footprinting|RREB1, Motifs|Footprinting|, Motifs|Footprinting|, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gm12892 5 5.13 NA NA chr9 135105964 132230577 A G A NTNG2 B missense_variant T/A 0.0018315 0.997 Motifs|Footprinting|, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Ag04449 5 5.07 IMMUNE NA chr9 139913239 137018787 T G G ABCA2 A missense_variant H/P 0 0.99992 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Medullo 5 4.31 NEUROLOGICAL NA chr9 139937795 137043343 T C T NPDC1 C missense_variant D/G 0.00503663 NA Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hmec, Protein_Binding|ChIP-seq|ELF1 4 2.27 NA NA chr9 140357972 137463520 A G A PNPLA7 B missense_variant W/R 0.00274725 0.998688 Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Hepg2, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|POLR2A 4 2.16 NA NA chr9 140374861 137480409 A G G PNPLA7 A missense_variant V/A 0 NA Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t 5 4.02 NA NA chr10 5255025 5213062 A G A AKR1C4 B missense_variant Q/R 0.000457875 NA Motifs|PWM|Pit-1, Motifs|PWM|Oct-1, Protein_Binding|ChIP-seq|AR 5 -1.26 NA NA chr10 7763661 7721698 A G A ITIH2 B missense_variant N/S 0.00824176 0.988928 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Cll 5 -3.6 NA NA chr10 13166076 13124076 A G G OPTN B missense_variant K/E 0.00869963 0.99062 NA NA 6.17 VISION|VISION|VISION|VISION|VISION|VISION|VISION|VISION|VISION Primary open angle glaucoma|Muscle weakness|Autosomal dominant inheritance|Myopia|Tongue fasciculations|Dysarthria|Dysphagia chr10 16943371 16901372 G C G CUBN A missense_variant S/W 0 0.999923 Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|FAIRE|H1hesc, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|FAIRE|Nhbe, Protein_Binding|ChIP-seq|NANOG, Protein_Binding|ChIP-seq|SP1 4 5.72 METABOLIC|OTHER Childhood onset|Sensory impairment|Confusion|Malabsorption of Vitamin B12|Autosomal recessive inheritance|Paresthesia|Proteinuria|Megaloblastic anemia|Dementia chr10 16967401 16925402 C T C CUBN B missense_variant C/Y 0.00457875 0.999616 Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi-1, Motifs|PWM|Evi1, Motifs|PWM|Evi1 6 -6.18 METABOLIC|OTHER Childhood onset|Sensory impairment|Confusion|Malabsorption of Vitamin B12|Autosomal recessive inheritance|Paresthesia|Proteinuria|Megaloblastic anemia|Dementia chr10 17659149 17617150 C T C PTPLA B missense_variant E/K 0.00686813 0.960571 Motifs|Footprinting|AP-2, Motifs|PWM|AP-2, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm06990, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|GATA1 2b 2.04 NA NA chr10 22498749 22209820 A T A EBLN1 B missense_variant V/D 0.000915751 NA NA NA 0.444 NA NA chr10 29822032 29533103 C T C SVIL B missense_variant V/I 0.00961538 0.987621 NA NA 0.74 IMMUNE NA chr10 50724016 49515970 C T C ERCC6-PGBD3 B missense_variant R/K 0.003663 0.993926 NA NA 0.699 OTHER|NEUROLOGICAL|OTHER|OTHER|RENAL NA chr10 50820345 49612299 C A C SLC18A3 B missense_variant A/E 0.00274725 0.995767 Motifs|PWM|Dmbx1, Motifs|PWM|znf143, Motifs|PWM|GTF2IRD1-isoform2, Chromatin_Structure|DNase-seq|Helas3 5 -2.77 NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL NA chr10 71018660 69258904 T C T HKDC1 B missense_variant W/R 0.00686813 0.993541 Motifs|PWM|GCNF, Motifs|PWM|Pax-6 6 2 NA NA chr10 71168685 69408929 A T A TACR2 A missense_variant M/K 0 NA Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|PWM|CTCF, Motifs|PWM|CTCF, Motifs|PWM|CTCF, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Monocd14, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|FAIRE|Mcf7, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Gm12865, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCFL, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 2a 4.88 OTHER NA chr10 98078239 96318482 A G A DNTT B missense_variant R/G 0.00732601 0.990697 NA NA -3.49 NA NA chr10 99991408 98231651 A G A R3HCC1L B missense_variant H/R 0.00686813 0.990389 Chromatin_Structure|DNase-seq|K562, Protein_Binding|ChIP-seq|TAL1 4 5.73 NA NA chr10 101544447 99784690 A T A ABCC2 B missense_variant Y/F 0.00412088 0.993465 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|A549, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|FAIRE|Nhek, Chromatin_Structure|DNase-seq|A549, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 5.58 METABOLIC|PHARMACOGENOMIC|PHARMACOGENOMIC|RENAL|PHARMACOGENOMIC|OTHER|PHARMACOGENOMIC|UNKNOWN|NEUROLOGICAL Biliary tract abnormality|Jaundice|Autosomal recessive inheritance|Conjugated hyperbilirubinemia chr10 102882635 101122878 A G A HUG1 B missense_variant N/D 0.0018315 NA Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|PWM|GATA-1, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|PWM|GATA-4, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hmec, Protein_Binding|ChIP-seq|SUZ12, Protein_Binding|ChIP-seq|IKZF1 2b -2.17 NA NA chr10 102882636 101122879 A C A HUG1 B missense_variant N/T 0.00457875 NA Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|PWM|GATA-1, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|Footprinting|GATA-4, Motifs|PWM|GATA-4, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hmec, Protein_Binding|ChIP-seq|SUZ12, Protein_Binding|ChIP-seq|IKZF1 2b 1.83 NA NA chr10 112572458 110812700 G C C RBM20 B missense_variant W/S 0.000915751 0.993649 Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|H7es, Protein_Binding|ChIP-seq|FOSL2, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|HNF4A 4 -2.2 NA Autosomal dominant inheritance|Dilated cardiomyopathy|Sudden cardiac death chr10 125506302 123746786 T C T CPXM2 C missense_variant Q/R 0.00961538 0.982239 Motifs|PWM|KROX, Motifs|PWM|Egr1, Motifs|Footprinting|KROX, Motifs|Footprinting|KROX, Chromatin_Structure|DNase-seq|H7es, Protein_Binding|ChIP-seq|EGR1 2b 4.34 NA NA chr10 131309383 129511119 A G A AL355531.2 B missense_variant L/P 0.000457875 NA NA NA -0.256 CANCER|CANCER|CANCER|CANCER|CANCER|CANCER|CANCER NA chr10 135165790 133352286 A G A PRAP1 C missense_variant H/R 0.00595238 0.989543 Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hl60, Protein_Binding|ChIP-seq|CDX2 4 -5.74 NA NA chr10 135233541 133420037 A G A MTG1 B missense_variant I/V 0.003663 0.996771 Motifs|Footprinting|MEF-2, Motifs|PWM|MEF-2, Motifs|PWM|MEF-2, Motifs|PWM|MEF-2, Motifs|PWM|RSRFC4, Motifs|Footprinting|Pax-4, Motifs|PWM|Pax-4, Motifs|PWM|RSRFC4, Motifs|PWM|MEF2A, Motifs|PWM|Srf, Motifs|PWM|Zfp105, Chromatin_Structure|DNase-seq|Werirb1 5 4.25 NA NA chr11 433387 433387 A G G ANO9 A missense_variant F/L 0 NA Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Protein_Binding|ChIP-seq|IKZF1 4 4.08 NA NA chr11 2424684 2403454 A C A TSSC4 C missense_variant H/P 0.00549451 0.993215 Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Werirb1 5 0.662 NA NA chr11 7670440 7649209 A G A PPFIBP2 B missense_variant R/G 0.000457875 0.998307 NA NA 5.3 NA NA chr11 9052423 9030876 A C C SCUBE2 B missense_variant H/Q 0.0018315 0.997614 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|8988t 5 4.47 NA NA chr11 13398129 13376582 T A T ARNTL B missense_variant W/R 0.00595238 NA Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Hrgec, Protein_Binding|ChIP-seq|IKZF1 4 3.7 PSYCH|OTHER NA chr11 17333663 17312116 G A A NUCB2 A missense_variant S/N 0 0.999915 Motifs|PWM|Sfpi1 6 3.03 NA NA chr11 20623156 20601610 C G C SLC6A5 B missense_variant A/G 0.003663 0.993234 Motifs|PWM|AP-1, Motifs|PWM|Bach2, Motifs|PWM|AP-1, Motifs|PWM|NF-E2, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hffmyc 5 5.59 NA Infantile onset|Muscle stiffness|Autosomal dominant inheritance|Autosomal recessive inheritance|Hypertonia|Apnea chr11 34152939 34131392 T C T NAT10 B missense_variant Y/H 0.000457875 0.997462 Motifs|PWM|Nkx2-5, Motifs|PWM|TTF1(Nkx2-1) 6 5.76 NA NA chr11 43911365 43889815 T C T ALKBH3 B missense_variant L/P 0.00274725 0.996771 NA NA -7.52 NA NA chr11 45937267 45915716 C T C PEX16 A missense_variant V/I 0 NA Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|H9es 5 5.29 NA Cataract|Ataxia|Seizures|Feeding difficulties in infancy|Optic atrophy|Visual impairment|Death in infancy|Very long chain fatty acid accumulation|Autosomal recessive inheritance|Global developmental delay|Retinal dystrophy|Sensorineural hearing impairment|Generalized neonatal hypotonia|Severe global developmental delay|Decreased liver function|Ventricular septal defect|Epiphyseal stippling|Hepatomegaly|Neonatal hypotonia chr11 49974371 49952819 G A G OR4C13 B missense_variant V/I 0.00228938 0.997306 NA NA 2.95 NA NA chr11 55587511 55820035 A G A OR5D18 B missense_variant N/D 0.003663 0.996536 NA NA 1.9 NA NA chr11 55681494 55914018 G A G OR5W2 B missense_variant R/C 0.000915751 0.999384 NA NA 5 NA NA chr11 55873024 56105548 A G A OR8H2 B missense_variant Y/C 0.000915751 0.997845 NA NA 3.58 NA NA chr11 55873368 56105892 G A G OR8H2 B missense_variant V/M 0.000915751 0.997844 NA NA 3.58 NA NA chr11 55890257 56122781 C T C OR8H3 B missense_variant P/S 0.0018315 0.997844 Chromatin_Structure|DNase-seq|Hsmmt 5 2.28 NA NA chr11 58207204 58439731 A G A OR5B12 B missense_variant C/R 0.00824176 NA NA NA -8.89 NA NA chr11 62292882 62525410 G T G AHNAK A missense_variant Q/K 0 NA NA NA 3.97 NA NA chr11 64677293 64909821 G C G ATG2A B missense_variant P/R 0.000457875 0.99946 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Progfib 5 4.67 NA NA chr11 64809090 65041618 T G T SAC3D1 B missense_variant L/R 0.00457875 0.998681 Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|FAIRE|Urotsa, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 4 3.9 NA NA chr11 64856500 65089028 A G A TMEM262 B missense_variant W/R 0.00274725 NA Motifs|Footprinting|Hmx3(Nkx5-1), Motifs|PWM|Hmx3(Nkx5-1), Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|8988t 5 5.29 NA NA chr11 64878661 65111189 T C T VPS51 B missense_variant L/P 0.000457875 NA Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|PWM|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|GATA-1, Motifs|Footprinting|Gata1, Motifs|Footprinting|Gata1, Motifs|PWM|Gata1, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepg2, Protein_Binding|ChIP-seq|CDX2 2b -2.98 NA NA chr11 65347636 65580165 G C G EHBP1L1 B missense_variant V/L 0.00137363 0.999374 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19239, Protein_Binding|ChIP-seq|MYC 4 4.39 NA NA chr11 65385606 65618135 A G A PCNXL3 B missense_variant Q/R 0.00274725 0.995288 Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hepatocytes, Protein_Binding|ChIP-seq|IKZF1 4 3.04 NA NA chr11 66472274 66704803 T C T SPTBN2 B missense_variant S/G 0.00869963 0.988149 Motifs|Footprinting|BCL6, Motifs|Footprinting|BCL6, Motifs|Footprinting|STAT5A(homodimer), Motifs|Footprinting|STAT5B(homodimer), Motifs|Footprinting|STAT5A(homodimer), Motifs|Footprinting|STAT5B(homodimer), Motifs|Footprinting|STAT5A(homodimer), Motifs|Footprinting|STAT5B(homodimer), Motifs|Footprinting|BCL6, Motifs|Footprinting|STAT5A(homodimer), Motifs|Footprinting|STAT5B(homodimer), Motifs|Footprinting|BCL6, Motifs|PWM|STAT5A(homodimer), Motifs|PWM|STAT5B(homodimer), Motifs|PWM|BCL6, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75 5 4.97 NA Onset|Gait ataxia|Slow progression|Impaired smooth pursuit|Dysmetria|Delayed speech and language development|Incoordination|Autosomal dominant inheritance|Autosomal recessive inheritance|Limb ataxia|Jerky ocular pursuit movements|Global developmental delay|Dysdiadochokinesis|Dysarthria|Facial myokymia|Gaze-evoked nystagmus|Spasticity|Intention tremor|Infantile onset|Impaired vibratory sensation|Hypometric saccades|Nystagmus|Hyperreflexia|Cerebellar atrophy chr11 66837965 67070494 T C C RHOD A missense_variant C/R 0 0.999846 Motifs|PWM|Isl2, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75 5 4.75 NA NA chr11 67258391 67490920 A G G AIP A missense_variant Q/R 0 0.999769 Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|POLR2A 4 4.49 NA Kyphosis|Hypertension|Autosomal dominant inheritance|Somatic mutation|Coarse facial features|Cardiomyopathy|Increased circulating ACTH level|Amyotrophy|Left ventricular hypertrophy|Biconcave vertebral bodies|Osteoporosis|Hirsutism|Facial erythema|Oligomenorrhea|Psychotic mentation|Abnormal fear/anxiety-related behavior|Striae distensae|Nephrolithiasis|Abnormality of metabolism/homeostasis|Vertebral compression fractures|Bruising susceptibility|Poor wound healing|Menstrual irregularities|Purpura|Alkalosis|Pituitary adenoma|Edema|Glucose intolerance|Abnormality of the breast|Hypokalemia|Thin skin|Obesity|Pituitary prolactin cell adenoma|Growth hormone excess chr11 67432804 67665333 T C T ALDH3B2 B missense_variant S/G 0.00137363 0.999769 Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Gm19240 5 3.21 NA NA chr11 67957518 68190051 A T T SUV420H1 A missense_variant I/N 0 NA NA NA 5.77 NA NA chr11 71184678 71473632 A C A NADSYN1 A missense_variant Q/H 0 NA Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|T47d, Protein_Binding|ChIP-seq|IKZF1 4 1.05 NA NA chr11 74904362 75193317 T C C SLCO2B1 A missense_variant I/T 0 NA Motifs|PWM|FOXL1, Motifs|PWM|Ehf, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|FAIRE|Mcf7, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hee 5 3.3 NA NA chr11 89133449 89400281 C T C NOX4 B missense_variant M/I 0.00274725 0.993077 Motifs|PWM|Hoxb6, Motifs|PWM|Dlx3, Motifs|PWM|Nkx6-1 6 -2.82 NA NA chr11 101771248 101900517 G A G ANGPTL5 B missense_variant R/W 0.00549451 0.995078 NA NA 4.88 NA NA chr11 101832478 101961747 G T T KIAA1377 A missense_variant G/C 0 NA Motifs|PWM|Rxra 6 1.79 NA NA chr11 104761206 104890479 C T T CASP12 A missense_variant G/S 0 NA NA NA -7.62 NA NA chr11 108183167 108312440 A G G ATM A missense_variant N/S 0 NA NA NA -0.136 CANCER|CANCER|CANCER|CANCER|CANCER|OTHER|OTHER|CANCER|CANCER|CANCER|CANCER|CANCER|CANCER Cafe-au-lait spot|Abnormal spermatogenesis|Delayed puberty|Diabetes mellitus|Autosomal recessive inheritance|Defective B cell differentiation|Short stature|Leukemia|Female hypogonadism|Abnormality of the hair|Immunoglobulin IgG2 deficiency|Lymphopenia|Elevated alpha-fetoprotein|Lymphoma|Nystagmus|IgA deficiency|Tremor|Myoclonus|Ataxia|Decreased number of CD4+ T cells|Seizures|Conjunctival telangiectasia|Dysarthria|Bronchiectasis|Dystonia|Recurrent bronchitis|Glucose intolerance|Choreoathetosis|Sinusitis|Strabismus|Reduced tendon reflexes|Hypoplasia of the thymus chr11 108380335 108509608 T C C EXPH5 A missense_variant N/D 0 0.999385 NA NA 5.8 NA Autosomal recessive inheritance|Hyperkeratosis|Fragile skin chr11 112832353 112961631 T C C NCAM1 A missense_variant F/L 0 NA Chromatin_Structure|DNase-seq|Lncap 5 3.88 PSYCH|PSYCH NA chr11 117160347 117289631 A G G BACE1 A missense_variant C/R 0 0.999538 Motifs|PWM|FAC1, Protein_Binding|ChIP-seq|GATA2 5 5.65 NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL NA chr11 118529069 118658360 G C C TREH A missense_variant P/A 0 NA Chromatin_Structure|DNase-seq|Hepatocytes 5 1.33 NA Autosomal recessive inheritance|Diarrhea chr11 118529078 118658369 G C C TREH B missense_variant P/A 0.00137363 NA Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm19238 5 -9.7 NA Autosomal recessive inheritance|Diarrhea chr11 121032978 121162269 G A G TECTA B missense_variant S/N 0.00320513 0.992079 Chromatin_Structure|DNase-seq|T47d 5 5.54 OTHER Autosomal dominant inheritance|Autosomal recessive inheritance|Sensorineural hearing impairment chr11 123754844 123884137 T C C TMEM225 A missense_variant N/S 0 0.999385 Motifs|PWM|Srf, Motifs|PWM|Srf 6 -2.09 NA NA chr11 134182375 134312481 G A G GLB1L3 B missense_variant V/M 0.00274725 0.999764 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|T47d 5 -8 NA NA chr12 2791205 2682039 A G G CACNA1C A missense_variant K/R 0 0.999806 Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|UrotsaUt189 5 -1.63 PHARMACOGENOMIC|PSYCH|PHARMACOGENOMIC J wave|Prolonged QT interval|Sudden death|Autosomal dominant inheritance|Syndactyly|Sudden cardiac death|Shortened QT interval|Ventricular arrhythmia|Syncope|Atrial fibrillation chr12 6560473 6451307 A G A CD27 B missense_variant H/R 0.00320513 0.991696 Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|PWM|IPF1, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|K562, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|NFKB1 2b 1.88 NA Splenomegaly|Lymphoproliferative disorder|Lymphadenopathy|Aplastic anemia|Hypogammaglobulinemia|Variable expressivity|Autosomal recessive inheritance|Hemophagocytosis|Ascites|Lymphoma|Hepatomegaly|Fever chr12 7079215 6970052 T G T PHB2 B missense_variant E/A 0.00778388 NA Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh75, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NR2C2, Protein_Binding|ChIP-seq|NR2C2, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|HNF4A 4 -0.368 NA NA chr12 7551022 7398426 A T A CD163L1 B missense_variant L/M 0.00412088 0.991312 Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Wi38, Protein_Binding|ChIP-seq|AR 4 -0.69 NA NA chr12 9248233 9095637 T C T A2M B missense_variant N/D 0.0018315 0.997653 Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Fibrop 5 -6.26 NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|IMMUNE|NEUROLOGICAL|NEUROLOGICAL|NEUROLOGICAL|NORMALVARIATION|METABOLIC|NEUROLOGICAL Abnormality of metabolism/homeostasis|Autosomal dominant inheritance chr12 9307373 9154777 T G T PZP B missense_variant T/P 0.00915751 0.977703 NA NA 0.627 NA NA chr12 14829893 14676959 A C A GUCY2C B missense_variant F/L 0.00915751 0.98716 Motifs|PWM|Rfx3, Motifs|PWM|MIF-1 6 -1.85 NA Meconium ileus|Microcolon|Autosomal dominant inheritance|Vitamin B12 deficiency|Autosomal recessive inheritance|Abdominal pain chr12 16369828 16216894 A T A SLC15A5 B missense_variant,splice_region_variant D/E 0.00228938 0.995401 Motifs|PWM|NF-AT, Chromatin_Structure|FAIRE|Panislets 6 5.15 NA NA chr12 25261735 25108801 G T G CASC1 C missense_variant A/E 0.00274725 0.998616 NA NA 4.31 NA NA chr12 27800746 27647813 G T G PPFIBP1 B missense_variant V/L 0.00503663 0.993541 NA NA -9.06 NA NA chr12 40869452 40475650 G T G MUC19 C missense_variant A/S 0.00869963 NA NA NA 1.23 NA NA chr12 55945119 55551335 A G A OR6C4 B missense_variant I/V 0.00732601 0.98962 NA NA 1.82 NA NA chr12 58204283 57810500 T C T AVIL A missense_variant K/E 0 NA Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Gliobla 5 5.19 NA NA chr12 64587633 64193853 C A C C12orf66 B missense_variant A/S 0.00412088 0.99352 Motifs|PWM|IPF1 6 6.07 NA NA chr12 101750814 101357036 T A T UTP20 B missense_variant L/Q 0.00641026 0.991927 Motifs|PWM|HOXC13, Motifs|PWM|Hoxa11, Motifs|PWM|Hoxa13, Motifs|PWM|Hoxc13 6 4.66 NA NA chr12 111786082 111348278 G C G CUX2 A missense_variant V/L 0 NA NA NA 4.25 NA NA chr12 114377899 113940094 G C G RBM19 B missense_variant Q/E 0.00457875 0.993849 Chromatin_Structure|DNase-seq|Chorion 5 3.36 NA NA chr12 120575549 120137745 A C C GCN1L1 B missense_variant Y/D 0.0018315 0.997803 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Werirb1 5 5.37 NA NA chr12 121437382 120999579 A G A HNF1A B missense_variant S/G 0.00915751 0.986887 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 2.58 METABOLIC|UNKNOWN|METABOLIC|METABOLIC|METABOLIC|CARDIOVASCULAR|METABOLIC|METABOLIC|METABOLIC|METABOLIC Type II diabetes mellitus|Type I diabetes mellitus|Infantile onset|Autosomal dominant inheritance|Renal cell carcinoma|Hyperglycemia|Polycystic ovaries|Hepatocellular adenoma|Maturity-onset diabetes of the young chr12 121622520 121184717 A T T P2RX7 B missense_variant N/I 0.00915751 0.983421 Motifs|PWM|Hic1, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|FAIRE|Nhek, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 3a 5.47 INFECTION|INFECTION|PSYCH|INFECTION|OTHER|INFECTION NA chr12 125397750 124913204 A G G UBC A missense_variant S/P 0 NA Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Caco2 5 2.42 NA NA chr12 132403161 131918616 A G A ULK1 B missense_variant T/A 0.00595238 0.990471 Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|PWM|znf143, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|UrotsaUt189 5 -5.91 NA NA chr13 39263714 38689577 T C C FREM2 A missense_variant S/P 0 0.999769 Motifs|PWM|Foxa2, Motifs|PWM|Mtf1, Motifs|PWM|Sox1, Chromatin_Structure|FAIRE|Medullo 6 4.94 NA Atresia of the external auditory canal|Autosomal recessive inheritance|Dental crowding|Aplasia/Hypoplasia of the phalanges of the hand|Skull defect|Severe T-cell immunodeficiency|Conductive hearing impairment|Aplasia/Hypoplasia of the thumb|Absent eyelashes|Bicornuate uterus|Vaginal atresia|Cryptorchidism|Dental malocclusion|Meningomyelocele|Cleft palate|Facial cleft|Wide nose|Lacrimal duct aplasia|Intellectual disability|Cryptophthalmos|Cleft ala nasi|Abnormality of the anus|Extension of hair growth on temples to lateral eyebrow|Laryngeal stenosis|Aplasia/Hypoplasia of the sternum|Hypertelorism|Hypospadias|Subglottic stenosis|Midline nasal groove|Wide pubic symphysis|Abnormality of the heart|Absent eyebrow|Micropenis|Anophthalmia|Encephalocele|Bilateral microphthalmos|Wide nasal bridge|Underdeveloped nasal alae|Hypoplastic superior helix|Renal hypoplasia/aplasia|Clitoromegaly|Pulmonary hypoplasia|Difficulty in tongue movements|Abnormality of the thymus|Cleft upper lip|Depressed nasal bridge|Blindness|Abnormality of the small intestine|Corneal opacity|Choanal stenosis|Renal hypoplasia|Upper eyelid coloboma|Hydrocephalus|Partial laryngeal atresia|Abnormality of the umbilicus|Low-set ears|Abnormal cortical gyration|Abnormality of the pinna|Cupped ear|Microcephaly|Malformed lacrimal ducts|Cutaneous finger syndactyly|Morphological abnormality of the middle ear|Wide intermamillary distance chr13 47260054 46685919 T C T LRCH1 B missense_variant S/P 0.00137363 0.998155 NA NA 5.93 METABOLIC NA chr13 53035925 52461790 A G A CKAP2 B missense_variant I/V 0.000457875 0.999692 Chromatin_Structure|FAIRE|H1hesc, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|FAIRE|Medullo, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Ips 5 -1.67 NA NA chr13 103385015 102732665 A G A CCDC168 B missense_variant L/P 0.00412088 0.997153 NA NA 1.34 NA NA chr13 103388220 102735870 A G A CCDC168 B missense_variant S/P 0.00869963 0.991459 Motifs|PWM|FOXP1, Motifs|PWM|Octamer, Motifs|PWM|Octamer, Motifs|PWM|POU1F1, Motifs|PWM|Pou3f3, Motifs|PWM|Pou3f3, Motifs|PWM|Sox13, Chromatin_Structure|FAIRE|Panislets 6 -2.28 NA NA chr13 103527849 102875499 G C G ERCC5 B missense_variant G/R 0.000457875 0.997463 Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Helas3 5 4.28 CANCER|CANCER|CANCER|CANCER Abnormality of metabolism/homeostasis|Autosomal dominant inheritance|Autosomal recessive inheritance|Abnormality of the skin|Defective DNA repair after ultraviolet radiation damage chr13 103527930 102875580 G C G ERCC5 B missense_variant G/R 0.000457875 0.997463 Motifs|PWM|Tcfap2e 6 0.141 CANCER|CANCER|CANCER|CANCER Abnormality of metabolism/homeostasis|Autosomal dominant inheritance|Autosomal recessive inheritance|Abnormality of the skin|Defective DNA repair after ultraviolet radiation damage chr13 110839550 110187203 T G G COL4A1 A missense_variant T/P 0 NA Motifs|PWM|E2A, Motifs|Footprinting|E2A, Motifs|Footprinting|E2A, Chromatin_Structure|DNase-seq|Melano 5 4.66 IMMUNE|UNKNOWN|CARDIOVASCULAR Porencephaly|Cerebral aneurysm|Autosomal dominant inheritance|Variable expressivity|Hypopigmentation of the fundus|Ischemic stroke|Stroke|Migraine with aura|Blurred vision|Muscle cramps|Posterior leukoencephalopathy|Renal insufficiency|Scotoma|Limb dystonia|Hypoplasia of the iris|Retinal hemorrhage|Babinski sign|Exotropia|Hydrocephalus|Hematuria|Supraventricular arrhythmia|Hemiplegia|Congenital cataract|Seizures|Intellectual disability|Amblyopia|Visual field defect|Renal cysts|Spasticity|Leukoencephalopathy|Hemiparesis|Retinal detachment|Tetraparesis|Retinal arteriolar tortuosity chr13 111368164 110715817 T G G ING1 A missense_variant L/R 0 0.998931 Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|DNase-seq|Caco2, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|NFYA, Protein_Binding|ChIP-seq|NFYA, Protein_Binding|ChIP-seq|NFYB, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|RFX5, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF7, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 -4.35 NA Autosomal recessive inheritance|Squamous cell carcinoma chr14 23549379 23080170 C G C ACIN1 B missense_variant A/P 0.000457875 0.996617 NA NA 5.42 NA NA chr14 23777374 23308165 A G A BCL2L2-PABPN1 B missense_variant Q/R 0.00137363 0.997693 Motifs|PWM|NF-AT 6 1.43 NA NA chr14 24567498 24098289 A C C PCK2 A missense_variant Q/P 0 NA NA NA 5.19 NA Hypoglycemia|Autosomal recessive inheritance|Fatty kidney|Hepatic steatosis|Hepatic failure|Impaired gluconeogenesis chr14 24614361 24145152 T G T PSME2 C missense_variant H/P 0.00595238 0.992234 NA NA 4.39 NA NA chr14 31582380 31113174 A G G HECTD1 A missense_variant L/P 0 NA NA NA 2.4 NA NA chr14 36004075 35534869 A G A INSM2 B missense_variant D/G 0.00320513 0.996689 Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|FAIRE|Huvec 5 1.63 NA NA chr14 61445967 60979249 A G G TRMT5 A missense_variant S/P 0 NA Motifs|PWM|HMGA2, Chromatin_Structure|DNase-seq|Sknmc 5 4.84 NA NA chr14 75513883 75047180 T C T MLH3 B missense_variant N/D 0.00686813 0.988774 Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|H1hesc 5 1.33 OTHER|CANCER Neoplasm of the stomach|Transitional cell carcinoma of the bladder|Autosomal dominant inheritance|Renal cell carcinoma|Uterine leiomyosarcoma|Hereditary nonpolyposis colorectal carcinoma|Endometrial carcinoma chr14 98444369 97978032 T C T C14orf64 B missense_variant N/S 0.00320513 NA Chromatin_Structure|FAIRE|Nhek, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Th2, Chromatin_Structure|DNase-seq|Th1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 -1.53 NA NA chr14 100847523 100381186 T C T WDR25 B missense_variant W/R 0.000915751 0.998308 NA NA 0.938 NA NA chr14 101198417 100732080 A G A DLK1 B missense_variant R/G 0.000915751 0.996771 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Protein_Binding|ChIP-seq|RFX3 4 1.36 IMMUNE NA chr14 103934488 103468151 T C C MARK3 A missense_variant F/S 0 NA Motifs|Footprinting| 6 5.63 NA NA chr14 106303846 105837512 C T T IGHD B missense_variant A/T 0.00137363 NA Motifs|PWM|NRSF, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|FAIRE|Gm12891, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 3a 3.59 NA NA chr15 40573716 40281515 A G A ANKRD63 B missense_variant S/P 0.00274725 NA Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Monocd14, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|FAIRE|Gm12891 5 3.82 NA NA chr15 48443699 48151502 T C C MYEF2 A missense_variant Q/R 0 0.999461 Motifs|PWM|Zfp410 6 5.81 NA NA chr15 48460927 48168730 C T C MYEF2 B missense_variant A/T 0.00549451 0.991608 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|FAIRE|Nhek, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Lncap 5 2.28 NA NA chr15 48580713 48288516 T C T SLC12A1 B missense_variant,splice_region_variant V/A 0.00137363 0.997437 Protein_Binding|ChIP-seq|MAFF, Protein_Binding|ChIP-seq|MAFK 5 4.5 CARDIOVASCULAR Hyperprostaglandinuria|Increased urinary chloride|Hypomagnesemia|Autosomal recessive inheritance|Paresthesia|Renal potassium wasting|Hyposthenuria|Short stature|Muscle cramps|Increased urinary potassium|Constipation|Osteopenia|Chondrocalcinosis|Tetany|Hypokalemic metabolic alkalosis|Polyuria|Increased circulating renin level|Seizures|Intellectual disability|Global developmental delay|Hyperaldosteronism|Renal juxtaglomerular cell hypertrophy/hyperplasia|Generalized muscle weakness|Increased serum prostaglandin E2|Diarrhea|Dehydration|Fever|Vomiting|Hypercalciuria|Failure to thrive|Hypochloremia|Polyhydramnios|Fetal polyuria|Hypokalemia|Renal salt wasting|Low-to-normal blood pressure|Hyperactive renin-angiotensin system|Small for gestational age|Nephrocalcinosis|Premature birth chr15 48807637 48515440 C T T FBN1 A missense_variant C/Y 0 NA NA NA 5.93 DEVELOPMENTAL|DEVELOPMENTAL|CARDIOVASCULAR|CARDIOVASCULAR|OTHER|CARDIOVASCULAR|OTHER|CARDIOVASCULAR|DEVELOPMENTAL|OTHER|CARDIOVASCULAR|OTHER|DEVELOPMENTAL|CANCER Delayed skeletal maturation|Pulmonic stenosis|Narrow face|Patent ductus arteriosus|Kyphoscoliosis|Severe Myopia|Malar flattening|Broad phalanges of the hand|Flexion contracture|Retrognathia|Autosomal dominant inheritance|Medial rotation of the medial malleolus|Myopia|Long face|Mitral valve prolapse|Congestive heart failure|Aortic regurgitation|Aortic valve stenosis|Hypoplasia of the iris|Mitral regurgitation|Dolichocephaly|Incisional hernia|Hoarse voice|Cataract|Round face|Long eyelashes|Pulmonary artery dilatation|Hypertelorism|Smooth philtrum|Spondylolisthesis|Ovoid vertebral bodies|Ventricular septal defect|Full cheeks|Pectus carinatum|Dural ectasia|Joint stiffness|Retinal detachment|Joint hypermobility|Limitation of joint mobility|Long philtrum|Broad ribs|Blindness|Micrognathia|Peripheral neuropathy|Hypoplasia of the maxilla|Fifth metacarpal with ulnar notch|Hepatomegaly|Overgrowth|Short phalanx of finger|Striae distensae|Tall stature|Shallow orbits|Ectopia lentis|Shallow anterior chamber|Proportionate short stature|Muscle weakness|Severe short stature|Short long bones|Thin bony cortex|Premature calcification of mitral annulus|Short metacarpal|Thickened skin|Pes planus|Pes cavus|Bulbous nose|Hammertoe|Dental crowding|Abnormality of the skin|Broad metacarpals|Short foot|Aortic root dilatation|Broad metatarsal|Cone-shaped epiphysis|Spinal canal stenosis|Misalignment of teeth|Short palm|Deep philtrum|Decreased muscle mass|Emphysema|Increased axial globe length|Genu recurvatum|Pneumothorax|Narrow mouth|Intellectual disability, mild|Protrusio acetabuli|Narrow palate|Thick lower lip vermilion|Disproportionate tall stature|Pulmonary hypertension|Respiratory insufficiency|Depressed nasal bridge|Brachydactyly syndrome|Broad skull|Premature osteoarthritis|Short stature|Arachnodactyly|Tricuspid valve prolapse|Anteverted nares|Mitral stenosis|Broad palm|Decreased subcutaneous fat|Abnormality of the sternum|Pectus excavatum|High palate|Thin upper lip vermilion|Lipodystrophy|Aortic dilatation|Lumbar hyperlordosis|Aortic dissection|Glaucoma|Scoliosis|Downslanted palpebral fissures|Abnormality of dental morphology|Brachycephaly|Deeply set eye|Ascending aortic aneurysm chr15 54306925 54014728 G A G UNC13C B missense_variant G/S 0.00869963 0.984785 NA NA 0.513 NEUROLOGICAL NA chr15 56386577 56094379 T G G RFX7 A missense_variant N/H 0 0.999919 Motifs|PWM|FOXP1, Motifs|PWM|HFH4(FOXJ1), Motifs|PWM|FOXO1, Motifs|PWM|FOXO1, Motifs|PWM|Tcf3, Chromatin_Structure|FAIRE|A549 6 5.89 NA NA chr15 57731335 57439137 A C A CGNL1 B missense_variant T/P 0.003663 0.993677 NA NA 4.87 NA NA chr15 67768151 67475813 G C G IQCH B missense_variant V/L 0.00228938 0.997462 NA NA -0.479 NA NA chr15 90784207 90240975 A G A GDPGP1 B missense_variant R/G 0.000457875 0.999846 Motifs|PWM|NRF-1, Motifs|PWM|Zfp161, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Cll 5 0.179 NA NA chr15 91524841 90981611 G T G PRC1 B missense_variant A/E 0.00228938 0.996151 NA NA 5.26 NA NA chr15 93588336 93045106 A C C RGMA A missense_variant D/E 0 NA Protein_Binding|ChIP-seq|GATA6, Protein_Binding|ChIP-seq|RFX3 5 -0.091 NA NA chr16 103517 53517 A C C POLR3K A missense_variant S/A 0 NA Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm12892, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|SMARCC1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|E2F1 4 5.06 NA NA chr16 2059674 2009673 T C C ZNF598 B missense_variant E/G 0.00732601 NA Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|CREBBP 4 3.3 NA NA chr16 2059955 2009954 A G A NPW B missense_variant E/G 0.0018315 NA Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm12865, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Monocd14, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Sknmc, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|SPI1, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|SPI1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|SP2, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|SIX5, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|TAF7, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZNF143, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 -0.39 NA NA chr16 2282256 2232255 G A G E4F1 C missense_variant R/H 0.00595238 0.992686 Motifs|PWM|Isgf3g, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Urotsa 5 -6.01 NA NA chr16 3406387 3356387 C G C OR2C1 B missense_variant C/W 0.00274725 0.997999 Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Be2c, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF 4 3.67 NA NA chr16 4861709 4811708 G C C GLYR1 A missense_variant H/Q 0 NA Motifs|Footprinting|Lyf-1, Motifs|Footprinting|Lyf-1, Motifs|Footprinting|Lyf-1, Motifs|Footprinting|Lyf-1, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Ikaros, Motifs|Footprinting|Zfx, Motifs|PWM|Lyf-1, Motifs|PWM|Ikaros, Motifs|PWM|Zfx 6 0.0979 NA NA chr16 8738499 8644642 G A G METTL22 B missense_variant A/T 0.00869963 0.986995 Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Nb4, Protein_Binding|ChIP-seq|IKZF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX 4 -4.67 NA NA chr16 8739784 8645927 T C T METTL22 B missense_variant I/T 0.00869963 NA Motifs|PWM|HFH1(FOXQ1), Motifs|PWM|HFH8(FOXF1A), Motifs|PWM|FOXO4, Motifs|PWM|FOXO3A, Motifs|PWM|Foxq1, Motifs|PWM|Sox11, Motifs|PWM|Sox13, Motifs|PWM|Sox17, Motifs|PWM|Sox18, Motifs|PWM|Sox4, Motifs|PWM|Sox7, Chromatin_Structure|FAIRE|Nhek, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Phte 5 -0.0562 NA NA chr16 20753123 20741801 T C T THUMPD1 B missense_variant D/G 0.00228938 NA Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|FAIRE|Hepg2, Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Ag09309, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HNF4G, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|TCF4, Protein_Binding|ChIP-seq|CEBPB, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|CEBPB, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|FOSL2, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|SIX5, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|FOSL1, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|BCLAF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|BCLAF1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NR3C1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|BRCA1, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|RFX5, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A 4 -6 NA NA chr16 22269867 22258546 A G A EEF2K B missense_variant Q/R 0.000915751 0.999846 Motifs|PWM|Gata3 6 3.78 NA NA chr16 27772901 27761580 G A G KIAA0556 A missense_variant A/T 0 0.999384 Protein_Binding|ChIP-seq|IKZF1 5 4.56 NA NA chr16 29708350 29697029 A G A QPRT B missense_variant T/A 0.000915751 0.998845 Motifs|PWM|Nkx2-1, Motifs|PWM|Nkx2-6, Motifs|PWM|Nkx2-4, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|DNase-seq|Gm12892 5 -9.46 NA NA chr16 29791561 29780240 T G G ZG16 A missense_variant L/V 0 0.999562 Motifs|PWM|Oct-1 6 4.65 NA NA chr16 30779716 30768395 A G G RNF40 A missense_variant Q/R 0 NA Chromatin_Structure|DNase-seq|Werirb1 5 5 NA NA chr16 56548501 56514589 C T C BBS2 B missense_variant S/N 0.00412088 0.99446 NA NA 5.54 METABOLIC Abnormality of the ovary|Hypertension|Poor coordination|Delayed speech and language development|Brachydactyly syndrome|Diabetes mellitus|Syndactyly|Autosomal recessive inheritance|Congenital primary aphakia|Myopia|Gait imbalance|Dental crowding|Abnormality of the kidney|Retinal dystrophy|Postaxial hand polydactyly|Short foot|Hypogonadism|Macrocephaly|Left ventricular hypertrophy|High palate|Hirsutism|Aganglionic megacolon|Foot polydactyly|Nystagmus|Vaginal atresia|Neurological speech impairment|Asthma|Retinitis pigmentosa|Cataract|Nephrogenic diabetes insipidus|Ataxia|Intellectual disability|Global developmental delay|Glaucoma|Specific learning disability|Hepatic fibrosis|Hypodontia|Biliary tract abnormality|Micropenis|Hearing impairment|Decreased testicular size|Strabismus|Obesity|Radial deviation of finger|Astigmatism chr16 57562804 57528892 G A G CCDC102A B missense_variant R/W 0.0018315 NA Chromatin_Structure|DNase-seq|Hpaf 5 4.82 NA NA chr16 68025801 67991898 G C C DPEP2 A missense_variant P/R 0 NA NA NA 3.82 NA NA chr16 82124776 82091171 G T G HSD17B2 A missense_variant G/W 0 NA NA NA -4.2 NA NA chr16 84217062 84183456 C T C TAF1C B missense_variant C/Y 0.000457875 0.99823 Motifs|Footprinting|NRSE, Motifs|PWM|NRSE, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Phte, Protein_Binding|ChIP-seq|IKZF1 2b -4.59 NA NA chr16 84444349 84410743 A C C ATP2C2 A missense_variant M/L 0 0.997846 Chromatin_Structure|DNase-seq|Nb4 5 3.89 PSYCH NA chr16 84493144 84459538 C G C ATP2C2 B missense_variant A/G 0.0018315 NA Motifs|PWM|Zbtb3, Motifs|PWM|Zbtb3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Phte, Protein_Binding|ChIP-seq|POLR2A 3a -0.829 PSYCH NA chr16 84520396 84486790 A G A TLDC1 B missense_variant C/R 0.00228938 0.998 Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Htr8 5 4.16 NA NA chr16 88502505 88436097 A G A ZNF469 B missense_variant H/R 0.00320513 0.995175 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Helas3Ifna4h 5 4.05 NA Congenital hip dislocation|Atypical scarring of skin|Abnormality of metabolism/homeostasis|Red hair|Myopia|Autosomal recessive inheritance|Mitral valve prolapse|Scoliosis|Epicanthus|Joint laxity|Dentinogenesis imperfecta|Blue sclerae|Spondylolisthesis|Macrocephaly|Keratoglobus|Palmoplantar cutis laxa|Keratoconus|Molluscoid pseudotumors|Hearing impairment|Disproportionate tall stature|Visual loss chr16 88504868 88438460 A G G ZNF469 A missense_variant T/A 0 0.99978 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|K562 5 -4.76 NA Congenital hip dislocation|Atypical scarring of skin|Abnormality of metabolism/homeostasis|Red hair|Myopia|Autosomal recessive inheritance|Mitral valve prolapse|Scoliosis|Epicanthus|Joint laxity|Dentinogenesis imperfecta|Blue sclerae|Spondylolisthesis|Macrocephaly|Keratoglobus|Palmoplantar cutis laxa|Keratoconus|Molluscoid pseudotumors|Hearing impairment|Disproportionate tall stature|Visual loss chr16 88872145 88805737 T C T CDT1 B missense_variant C/R 0.000457875 0.999538 Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|T47d 5 3.83 NA Delayed skeletal maturation|Emphysema|Low-set ears|Slender long bone|Genu recurvatum|Autosomal recessive inheritance|Patellar aplasia|Narrow mouth|Birth length <3rd percentile|Micrognathia|Breast hypoplasia|Hooked clavicles|Failure to thrive|Hypoplasia of the maxilla|Microtia|Microcephaly|Intrauterine growth retardation|Feeding difficulties|Thick lower lip vermilion|Cryptorchidism chr17 3458072 3554778 T C T TRPV3 B missense_variant I/V 0.00412088 0.998001 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19239 5 -0.188 NA Sparse hair|Nail dysplasia|Flexion contracture|Parakeratosis|Hyperhidrosis|Opacification of the corneal stroma|Autosomal dominant inheritance|Pruritus|Subungual hyperkeratosis|Nail dystrophy|Alopecia universalis chr17 3514028 3610734 G C C SHPK A missense_variant D/E 0 0.999769 Motifs|PWM|Ascl2, Motifs|Footprinting|, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hsmmt, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST 2b 0.309 NA NA chr17 4693170 4789875 T C T GLTPD2 B missense_variant V/A 0.00549451 0.991133 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Gm18507, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ELK4, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|YY1 4 -1.06 NA NA chr17 7417086 7513767 G A A POLR2A A missense_variant A/T 0 0.999923 Chromatin_Structure|DNase-seq|Hepatocytes 5 3.4 NA NA chr17 11523082 11619765 A G A DNAH9 B missense_variant Q/R 0.00595238 0.991773 NA NA 4 NA NA chr17 26684449 28357424 G C C POLDIP2 B missense_variant P/A 0.00228938 NA Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|Footprinting|AP-2, Motifs|PWM|AP-2, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Progfib, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|IKZF1, Protein_Binding|ChIP-seq|SPDEF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|GATA1 2b 3.86 NA NA chr17 36861983 38705730 T C C MLLT6 A missense_variant V/A 0 NA Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Caco2, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|SMARCA4 4 2.34 NA NA chr17 37898543 39742290 T C T GRB7 B missense_variant C/R 0.0018315 0.997847 Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Htr8 5 1.11 NA NA chr17 38978536 40822284 A C A KRT10 B missense_variant I/S 0.0018315 0.998308 Motifs|PWM|LUN-1 6 5.36 NA Abnormality of the nail|Erythroderma|Abnormality of the hair|Abnormal blistering of the skin|Autosomal dominant inheritance|Palmoplantar hyperkeratosis|Erythema|Hyperkeratosis|Congenital ichthyosiform erythroderma chr17 42030743 43953375 G C G PYY B missense_variant R/G 0.00137363 NA Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|IKZF1 4 2.43 METABOLIC|METABOLIC|METABOLIC NA chr17 44144993 NA C G NA KANSL1 B missense_variant R/P 0.000915751 0.998924 NA NA 4.24 NEUROLOGICAL Pulmonic stenosis|Widely spaced teeth|Dry skin|Bulbous nose|Bicuspid aortic valve|Autosomal dominant inheritance|Variable expressivity|Long face|Macrotia|Epicanthus|Narrow palm|Prominent metopic ridge|Broad chin|Abnormality of hair texture|Pyloric stenosis|Overfolded helix|Cryptorchidism|Cataract|Nasal speech|Cleft palate|Seizures|Intellectual disability|Pear-shaped nose|Global developmental delay|Poor speech|Vertebral fusion|High, narrow palate|Hip dislocation|Hypotrophy of the small hand muscles|Spondylolisthesis|Failure to thrive|Intrauterine growth retardation|Prominent nasal bridge|Ventricular septal defect|Hip dysplasia|Defect in the atrial septum|Narrow palate|Hypermetropia|Joint hypermobility|Small for gestational age|Cleft upper lip|Kyphosis|Delayed speech and language development|Feeding difficulties in infancy|Broad forehead|Conspicuously happy disposition|Vesicoureteral reflux|High forehead|Short stature|Open mouth|Arachnodactyly|Generalized hypotonia|Ventriculomegaly|Positional foot deformity|Pectus excavatum|Sporadic|High palate|Aortic dilatation|Ptosis|Blepharophimosis|Upslanted palpebral fissure|Everted lower lip vermilion|Contiguous gene syndrome|Scoliosis|Microcephaly|Hypotelorism|Hydronephrosis|Sacral dimple|Strabismus|Wide intermamillary distance|Prominent fingertip pads|Eczema chr17 47297297 49219935 T C T ABI3 B missense_variant F/S 0.00320513 0.992993 Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|8988t, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ELF1 4 2.61 NA NA chr17 56544280 58466919 T G G HSF5 A missense_variant N/T 0 0.999769 NA NA 5.81 NA NA chr17 59955426 61878065 T G T INTS2 B missense_variant N/H 0.003663 0.992951 Chromatin_Structure|FAIRE|Mcf7, Protein_Binding|ChIP-seq|TRIM28, Protein_Binding|ChIP-seq|SETDB1, Protein_Binding|ChIP-seq|SETDB1 5 1.33 NA NA chr17 71232804 73236665 C A C C17orf80 B missense_variant H/N 0.00686813 0.992157 Chromatin_Structure|FAIRE|UrotsaUt189, Protein_Binding|ChIP-seq|RFX3 5 0.997 NA NA chr17 78298938 80325138 A G G RNF213 A missense_variant N/D 0 NA Motifs|Footprinting|SRF, Motifs|PWM|SRF, Motifs|PWM|RORA_1 6 5.49 NA NA chr17 78972326 80998526 A G A CHMP6 B missense_variant Q/R 0.00457875 NA Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap 5 -4.92 NA NA chr17 79409309 81442283 A G A RP11-1055B8.7 B missense_variant T/A 0.000915751 NA Motifs|Footprinting|ZNF219, Motifs|Footprinting|ZNF219, Motifs|PWM|ZNF219, Motifs|Footprinting|ZNF219, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Helas3, Protein_Binding|ChIP-seq|IKZF1 2b -0.684 NA NA chr18 19014978 21435017 C G C GREB1L B missense_variant N/K 0.00228938 NA Motifs|PWM|HEN1, Motifs|PWM|Egr, Motifs|PWM|KROX, Motifs|Footprinting|Sp1, Motifs|PWM|Sp1, Motifs|PWM|Zif268 6 5.65 NA NA chr18 21511089 23931125 A G G LAMA3 A missense_variant S/G 0 NA Motifs|PWM|COUPTF 6 -8.76 NA Abnormality of the eye|Heterogeneous|Abnormality of the foot|Autosomal recessive inheritance|Junctional split|Recurrent loss of toenails and fingernails|Camptodactyly of finger|Oral mucusa blisters|Pyloric stenosis|Skin ulcer|Nail dystrophy|Palmar hyperhidrosis|Hypoplasia of dental enamel|Congenital localized absence of skin|Nail dysplasia|Weak cry|Plantar hyperkeratosis|Death in infancy|Hoarse cry|Amelogenesis imperfecta|Milia|Fragile nails|Hypodontia|Failure to thrive|Carious teeth|Infantile onset|Atrophic scars|Congenital onset chr18 29055957 31475994 A G A DSG3 B missense_variant T/A 0.00137363 0.998155 NA NA 1.12 IMMUNE|NEUROLOGICAL NA chr18 29339910 31759947 G T G SLC25A52 B missense_variant L/I 0.00274725 0.999923 NA NA 1.22 NA NA chr18 29497573 31917610 A G A TRAPPC8 B missense_variant L/S 0.000457875 0.999616 NA NA 6.05 NA NA chr18 30804756 33224792 C T C CCDC178 B missense_variant D/N 0.00457875 0.995232 Motifs|PWM|IRF 6 1.85 NA NA chr18 33779896 36199933 A G A MOCOS B missense_variant S/G 0.00549451 0.991235 Motifs|PWM|Elf3, Chromatin_Structure|DNase-seq|Hcm 5 -0.549 NA NA chr18 33780020 36200057 A G A MOCOS B missense_variant H/R 0.00732601 0.991235 Motifs|PWM|VDR=CAR=PXR, Motifs|PWM|COMP1, Chromatin_Structure|DNase-seq|Hasp 5 1.7 NA NA chr18 49867224 52340854 T C T DCC C missense_variant F/L 0.00915751 0.989159 Motifs|PWM|Nkx6-2, Motifs|PWM|Glis2, Motifs|PWM|Tcf7, Chromatin_Structure|DNase-seq|Hmec 5 4.83 NA Neoplasm of the stomach|Transitional cell carcinoma of the bladder|Autosomal dominant inheritance|Incomplete penetrance|Renal cell carcinoma|Uterine leiomyosarcoma|Neoplasm|Hereditary nonpolyposis colorectal carcinoma|Bimanual synkinesia chr18 53303101 55635870 C G G TCF4 B missense_variant A/P 0.000915751 0.998774 Motifs|PWM|Oct-1, Motifs|PWM|POU3F2, Motifs|PWM|Oct-1, Motifs|PWM|STAT6, Chromatin_Structure|FAIRE|Medullo 6 0.675 NA Pes planus|Widely spaced teeth|Intellectual disability, severe|Narrow forehead|Gait ataxia|Clubbing|Incoordination|Autosomal dominant inheritance|Single transverse palmar crease|Myopia|Short neck|Coarse facial features|Hypoplasia of the corpus callosum|Open mouth|Constipation|Short philtrum|Gastroesophageal reflux|Narrow foot|Cryptorchidism|Tapered finger|Absent speech|Hyperventilation|Muscular hypotonia|Seizures|Upslanted palpebral fissure|Aggressive behavior|Cupped ear|Motor delay|Microcephaly|Full cheeks|Micropenis|Wide nasal bridge|Deeply set eye|Strabismus|Intellectual disability, progressive|Astigmatism chr18 55317676 57650444 C T C ATP8B1 B missense_variant A/T 0.000457875 0.99877 Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|FAIRE|Medullo 5 4.34 OTHER|METABOLIC|IMMUNE|PSYCH Abnormal liver function tests during pregnancy|Biliary cirrhosis|Intrahepatic cholestasis|increased serum bile acid concentration during pregnancy|Pancreatitis|Jaundice|Autosomal dominant inheritance|Intrahepatic cholestasis with episodic jaundice|Pruritus|Autosomal recessive inheritance|Diarrhea|Cirrhosis|Splenomegaly|Failure to thrive|Infantile onset|Fat malabsorption|Severe short stature|Hepatomegaly|Intermittent jaundice|Premature birth|Conjugated hyperbilirubinemia chr18 72021717 74354482 T C T C18orf63 B missense_variant L/P 0.000915751 NA Motifs|PWM|Pbx-1, Chromatin_Structure|FAIRE|Medullo 6 -3.45 NA NA chr19 549678 549678 A G A GZMM B missense_variant R/G 0.00503663 0.992849 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gliobla 5 1.17 NA NA chr19 687142 687142 G A G PRSS57 B missense_variant P/L 0.00274725 0.993763 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap 5 3.59 NA NA chr19 1094004 1094005 G A G POLR2E B missense_variant S/F 0.00228938 0.999923 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Helas3 5 3.64 NA NA chr19 2251817 2251818 T C T AMH B missense_variant V/A 0.00595238 0.982016 Motifs|Footprinting|Myogenin, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Th2, Protein_Binding|ChIP-seq|POLR2A 4 1.04 NA Male infertility|Inguinal hernia|Autosomal recessive inheritance|Abnormality of circulating hormone level|Bilateral cryptorchidism chr19 3150238 3150240 A G G GNA15 A missense_variant Y/C 0 NA Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Osteobl 5 3.83 NA NA chr19 5135392 5135381 A G G KDM4B A missense_variant K/E 0 NA Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips 5 3.81 NA NA chr19 5214697 5214686 A G A PTPRS B missense_variant C/R 0.0018315 0.99877 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Medullo 5 0.736 NA NA chr19 8645786 8580902 A C A ADAMTS10 B missense_variant H/Q 0.000457875 0.999846 Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|PWM|CTCF, Motifs|PWM|CTCF, Motifs|PWM|CTCF, Motifs|PWM|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Motifs|Footprinting|CTCF, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Monocd14, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Sknmc, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Th2, Chromatin_Structure|DNase-seq|Werirb1, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Gm12865, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Nb4, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ELK4, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|EP300, Protein_Binding|ChIP-seq|TCF12, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GATA2, Protein_Binding|ChIP-seq|GATA2, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|TCF12, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCFL, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|SMC3, Protein_Binding|ChIP-seq|ZNF143, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|SMC3 2a -2.4 DEVELOPMENTAL Pulmonic stenosis|Patent ductus arteriosus|Depressed nasal bridge|Severe Myopia|Broad ribs|Broad phalanges of the hand|Brachydactyly syndrome|Autosomal recessive inheritance|Blindness|Broad skull|Broad metacarpals|Broad palm|Hypoplasia of the maxilla|Broad metatarsal|Spinal canal stenosis|Aortic valve stenosis|Misalignment of teeth|Lumbar hyperlordosis|Mitral regurgitation|Cataract|Glaucoma|Shallow orbits|Scoliosis|Intellectual disability, mild|Ectopia lentis|Shallow anterior chamber|Abnormality of dental morphology|Proportionate short stature|Ventricular septal defect|Brachycephaly|Joint stiffness|Narrow palate|Thin bony cortex chr19 9087615 8976939 T A T MUC16 B missense_variant K/N 0.00320513 0.999685 NA NA 0.0103 NA NA chr19 15508362 15397551 G C C AKAP8L A missense_variant H/Q 0 NA Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 5 1.43 NA NA chr19 16899838 16789027 A T A NWD1 B missense_variant N/I 0.0018315 0.999923 NA NA 5.65 NA NA chr19 17746947 17636138 A G A UNC13A A missense_variant L/P 0 NA Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|FAIRE|Helas3 5 3.52 NA NA chr19 19040312 18929503 G C G HOMER3 B missense_variant S/R 0.000915751 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Sknshra, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 1.51 NA NA chr19 35991442 35500540 T G T DMKN B missense_variant D/A 0.00228938 0.994157 Motifs|PWM|Hic1, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|8988t 5 4.11 NA NA chr19 36243089 35752188 T C C LIN37 A missense_variant V/A 0 NA NA NA 5.41 NA NA chr19 36355595 35864693 A G G KIRREL2 A missense_variant K/E 0 NA Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Hsmmt 5 2.25 NA NA chr19 36486445 35995543 G C G SDHAF1 B missense_variant C/S 0.00457875 NA Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|A549, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|TFAP2A, Protein_Binding|ChIP-seq|TFAP2C, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|ZNF263 4 -0.338 NA Flexion contracture|Dilated cardiomyopathy|Progressive leukoencephalopathy|Autosomal recessive inheritance|Short stature|Hypertrophic cardiomyopathy|Developmental regression|Ragged-red muscle fibers|Phenotypic variability|Exercise intolerance|Hyperreflexia|Babinski sign|Myoclonus|Ataxia|Seizures|Dystonia|Spasticity|Increased intramyocellular lipid droplets|Increased serum lactate|Leukoencephalopathy|Muscle weakness|Stress/infection-induced lactic acidosis|Infantile onset|Abnormal mitochondria in muscle tissue|Decreased activity of mitochondrial complex II|Neonatal hypotonia chr19 38202516 37711615 A C A ZNF607 C missense_variant S/A 0.00961538 0.999769 NA NA 1.88 NA NA chr19 38377409 37886769 A T T WDR87 A missense_variant V/E 0 NA Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|FAIRE|Helas3 5 -1.51 NA NA chr19 40149297 39658657 T A A LGALS16 A missense_variant L/H 0 NA NA NA -2.41 NA NA chr19 41743861 41237956 A G G AXL A missense_variant N/D 0 NA Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|FAIRE|A549, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19238 5 4.11 NA NA chr19 43439793 42935641 G A A PSG7 B missense_variant H/Y 0.000457875 NA NA NA 0.359 NA NA chr19 44047826 43543674 T A A XRCC1 A missense_variant N/Y 0 0.999923 Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|FAIRE|A549, Chromatin_Structure|DNase-seq|Gm12892 5 5.05 CANCER|CANCER|CANCER|METABOLIC|OTHER|CANCER|CANCER|CANCER|CANCER|OTHER|CANCER|OTHER|CANCER|UNKNOWN|CANCER|OTHER|UNKNOWN|CANCER|CANCER|CANCER|CANCER|CANCER|CANCER|CANCER|PHARMACOGENOMIC|PHARMACOGENOMIC|CANCER|CANCER|OTHER|PHARMACOGENOMIC|PHARMACOGENOMIC|OTHER|PHARMACOGENOMIC|CANCER|OTHER|CANCER|CANCER|REPRODUCTION|IMMUNE|CANCER|CANCER|CANCER NA chr19 44377357 43873205 C T C ZNF404 B missense_variant G/S 0.000457875 NA Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|A549, Protein_Binding|ChIP-seq|ZNF274, Protein_Binding|ChIP-seq|ZNF274, Protein_Binding|ChIP-seq|TRIM28, Protein_Binding|ChIP-seq|ZNF274, Protein_Binding|ChIP-seq|SETDB1, Protein_Binding|ChIP-seq|SETDB1 4 2.01 NA NA chr19 45561063 45057805 A G G CLASRP A missense_variant K/E 0 0.999923 Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|IKZF1 4 4.69 NA NA chr19 47177913 46674656 A G G PRKD2 A missense_variant V/A 0 0.999077 Motifs|PWM|HIF1, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H9es, Protein_Binding|ChIP-seq|IKZF1 3a 4.79 CANCER NA chr19 50383591 49880334 A G G TBC1D17 A missense_variant D/G 0 NA Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|Footprinting|HNF4, Motifs|PWM|HNF4, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|Footprinting|PPARG::RXRA, Motifs|PWM|PPARG::RXRA, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|Footprinting|PPARgamma:RXRalpha, Motifs|PWM|PPARgamma:RXRalpha, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Protein_Binding|ChIP-seq|HNF4A 2a 4.17 NA NA chr19 51411636 50908380 G T T KLK4 B missense_variant H/Q 0.00137363 0.997001 Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Ips 5 -4.43 NA Autosomal recessive inheritance|Amelogenesis imperfecta chr19 51452250 50948994 T C C KLK5 A missense_variant N/D 0 0.999692 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huh75 5 4.34 NA NA chr19 55671337 55159969 C T T DNAAF3 A missense_variant D/N 0 NA Motifs|PWM|COUPTF, Motifs|Footprinting|COUPTF, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892 5 2.26 NA Absent inner and outer dynein arms|Nasal polyposis|Respiratory distress|Infertility|Immotile cilia|Recurrent respiratory infections|Autosomal recessive inheritance|Situs inversus totalis|Bronchiectasis|Sinusitis|Hearing impairment|Congenital onset|Otitis media chr19 55699454 55188086 T C C PTPRH A missense_variant K/E 0 NA Chromatin_Structure|DNase-seq|Gm12891 5 4.15 NA NA chr20 17605240 17624595 A T A RRBP1 A missense_variant L/H 0 0.999923 Motifs|PWM|AP-4, Chromatin_Structure|DNase-seq|Lncap 5 1.65 NA NA chr20 17640009 17659364 A C C RRBP1 A missense_variant S/A 0 NA NA NA -0.897 NA NA chr20 18143117 18162473 T G T CSRP2BP B missense_variant V/G 0.00961538 0.980624 Motifs|PWM|RFX1 6 6.03 NA NA chr20 18296072 18315428 T A T ZNF133 B missense_variant S/T 0.00503663 0.995464 Chromatin_Structure|DNase-seq|Caco2 5 -3.74 NA NA chr20 31022959 32435156 T C C ASXL1 A missense_variant L/P 0 0.999923 Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Osteobl 5 -4.18 NA Joint dislocation|Camptodactyly|Retrognathia|Autosomal dominant inheritance|Myopia|Long face|Autosomal recessive inheritance|Myelodysplasia|Hypoplasia of the corpus callosum|Prominent metopic ridge|Intellectual disability, profound|Gastroesophageal reflux|Delayed peripheral myelination|Deep palmar crease|Muscular hypotonia|Cleft palate|Seizures|Thick hair|Global developmental delay|Proptosis|Hypertelorism|Failure to thrive|Broad alveolar ridges|Intrauterine growth retardation|Intestinal malrotation|Ventricular septal defect|Wide nasal bridge|Low anterior hairline|Defect in the atrial septum|Deep plantar creases|Narrow palate|Agenesis of corpus callosum|Hyperechogenic pancreas|Prominent forehead|mesomelic/rhizomelic limb shortening|Ulnar deviation of the wrist|Cleft upper lip|Narrow forehead|Dandy-Walker malformation|Somatic mutation|Syndactyly|Vesicoureteral reflux|Overlapping toe|Micrognathia|Broad palm|Dislocated radial head|Nevus flammeus|Hirsutism|Short toe|Tapered finger|Facial hemangioma|Low-set ears|Upslanted palpebral fissure|Posteriorly rotated ears|Microcephaly|Supernumerary nipples|Feeding difficulties|Polyhydramnios|Heterotopia|Sacral dimple|Strabismus|Wide intermamillary distance|Trigonocephaly chr20 33583331 34995528 A G G MYH7B A missense_variant K/E 0 NA Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hmvecdblneo 5 5.38 NA NA chr20 48770159 50153622 T C T TMEM189-UBE2V1 B missense_variant N/D 0.000915751 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gm12878, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|SREBF1, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 0.707 NA NA chr20 56186884 57611828 T C T ZBP1 B missense_variant Q/R 0.00641026 0.994003 Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|Footprinting|Nkx3-2, Motifs|PWM|Nkx3-2, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Ips 5 -2.03 NA NA chr21 15516976 14144655 T A A LIPI A missense_variant R/S 0 NA NA NA -0.291 NA NA chr21 15974409 14602088 T C C AF165138.7 A missense_variant N/D 0 NA Motifs|PWM|OCT-x, Motifs|PWM|Oct-1 6 3.2 NA NA chr21 30250555 28878233 T C C N6AMT1 A missense_variant K/R 0 NA Motifs|PWM|Obox6, Chromatin_Structure|FAIRE|Huvec 6 1.23 NA NA chr21 30250615 28878293 T C C N6AMT1 A missense_variant K/R 0 NA NA NA 4.26 NA NA chr21 30257568 28885246 T C C N6AMT1 A missense_variant N/D 0 NA Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|FAIRE|Gliobla, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Nhdfneo, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|STAT2, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|STAT3, Protein_Binding|ChIP-seq|FOSL1, Protein_Binding|ChIP-seq|TAF7, Protein_Binding|ChIP-seq|STAT3, Protein_Binding|ChIP-seq|STAT3, Protein_Binding|ChIP-seq|ZNF263, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|SMARCA4, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|STAT2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|SETDB1, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|NR4A1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NANOG, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|BCLAF1, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|GTF2F1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SP2, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|IRF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|THAP1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ATF3, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HNF4A, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SMARCB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|SPI1, Protein_Binding|ChIP-seq|SETDB1, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 5.18 NA NA chr21 34925142 33552836 C T C SON A missense_variant S/L 0 0.999846 Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|T47d, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 5.12 NA NA chr21 35467645 34095346 A G G SLC5A3 A missense_variant T/A 0 NA NA NA 6.11 CARDIOVASCULAR NA chr21 35469193 34096894 C A A SLC5A3 A missense_variant Q/K 0 NA Motifs|PWM|mTERF, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|REST 5 3.59 CARDIOVASCULAR NA chr21 38444863 37072563 C T T PIGP A missense_variant A/T 0 NA Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Sknmc, Chromatin_Structure|DNase-seq|Rptec, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12865, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hepg2, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TFAP2C, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CDX2 4 0.406 NA NA chr21 40969826 39597899 G C G C21orf88 B missense_variant C/W 0.000457875 0.998905 NA NA 0.0893 NA NA chr21 43221483 41801323 A G A PRDM15 B missense_variant S/P 0.00228938 0.994925 Motifs|PWM|CAC-bindingprotein 6 3.3 OTHER NA chr21 46314907 44894992 T A A ITGB2 A missense_variant Q/H 0 0.999846 Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|Footprinting|Brn-2, Motifs|PWM|Brn-2, Motifs|PWM|Pou6f1, Motifs|PWM|Pou6f1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|Footprinting|IPF1, Motifs|PWM|IPF1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|Footprinting|Nkx6-1, Motifs|PWM|Nkx6-1, Chromatin_Structure|FAIRE|Helas3 6 1.13 CARDIOVASCULAR|CARDIOVASCULAR|OTHER Leukocytosis|Recurrent staphylococcal infections|Abnormality of metabolism/homeostasis|Recurrent gram-negative bacterial infections|Autosomal recessive inheritance|Rectal abscess|Periodontitis|Gingivitis chr22 20779947 20425657 G C C SCARF2 C missense_variant D/E 0.00778388 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|UrotsaUt189 5 3.01 NA Talipes equinovarus|Thin ribs|Depressed nasal bridge|Malar flattening|Glenoid fossa hypoplasia|Slender long bone|Elbow flexion contracture|Prominent ears|Autosomal recessive inheritance|Femoral bowing|Dental crowding|Long hallux|Hooked clavicles|Arachnodactyly|Camptodactyly (feet)|Hypoplasia of the maxilla|Knee flexion contracture|Dislocated radial head|Narrow nose|Stridor|Pectus excavatum|High palate|Narrow foot|Joint contracture of the hand|Hallux valgus|Long metacarpals|Cleft palate|Blepharophimosis|Everted lower lip vermilion|Single umbilical artery|Slender metacarpals|Laryngomalacia|Abnormality of the eyebrow|Distal ulnar hypoplasia|Underdeveloped nasal alae|Ulnar bowing chr22 24717850 24321882 A G G SPECC1L A missense_variant D/G 0 NA NA NA 4.72 NA Cleft upper lip|Cleft palate|Facial cleft|Autosomal recessive inheritance|Deep palmar crease|Coloboma chr22 29727886 29331897 T C C AP1B1 A missense_variant T/A 0 0.999923 Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|Footprinting|AP-4, Motifs|PWM|AP-4, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Th2 5 3.57 CARDIOVASCULAR NA chr22 36623731 36227685 T C C APOL2 A missense_variant I/V 0 NA Motifs|PWM|Egr1, Motifs|PWM|Zif268, Chromatin_Structure|DNase-seq|Gm12892, Protein_Binding|ChIP-seq|POLR2A 3a -1.47 NA NA chr22 39497509 39101504 A G G APOBEC3H A missense_variant,splice_region_variant N/D 0 NA Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Helas3 5 2.28 NA NA chr22 45789642 45393762 A C C SMC1B A missense_variant F/V 0 NA Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hmec 5 5.01 NA NA chr22 45923827 45527947 A G A FBLN1 B missense_variant Q/R 0.000915751 0.998539 Motifs|PWM|Pit-1, Motifs|PWM|Bbx, Protein_Binding|ChIP-seq|CTCF 5 5.21 NA Carpal synostosis|Synostosis involving metatarsal bones|Metacarpal synostosis|Polydactyly|Autosomal dominant inheritance|Tarsal synostosis|Toe syndactyly chr22 46677607 46281710 T C T TTC38 B missense_variant F/L 0.000915751 0.999762 Motifs|PWM|Zfp691, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Helas3 5 3.65 NA NA chr22 50657010 50218581 C G C TUBGCP6 B missense_variant V/L 0.0018315 0.994695 Motifs|PWM|CTCF, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm19240 5 1.61 NA Abnormality of skin pigmentation|Cataract|Microcephaly|Chorioretinopathy|Intellectual disability|Autosomal recessive inheritance|Optic disc pallor|Abnormal retinal pigmentation|Nystagmus|Microphthalmos chrX 17819377 17801257 T C T RAI2 B missense_variant M/V 0.000602773 0.999527 Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Nhdfad, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hmec 5 5.29 NA NA chrX 30872602 30854485 A G G TAB3 B missense_variant W/R 0 0.999811 NA NA 3.8 NA NA chrX 47057647 47198248 A G A UBA1 B missense_variant I/V 0.0066305 NA NA NA -3.06 NA Ptosis|Myopathy|Abnormality of metabolism/homeostasis|Respiratory insufficiency due to muscle weakness|Tongue fasciculations|Multiple joint contractures|Scoliosis|Micrognathia|Hypospadias|Arthrogryposis multiplex congenita|Severe muscular hypotonia|Micropenis|Inguinal hernia|X-linked recessive inheritance|Degeneration of anterior horn cells|Myopathic facies|X-linked inheritance|Decreased fetal movement|Cryptorchidism|Areflexia chrX 48460314 48601926 A G G WDR13 B missense_variant H/R 0 0.999811 Chromatin_Structure|FAIRE|Nhbe, Chromatin_Structure|DNase-seq|Hsmmt 5 4.54 NA NA chrX 49021256 49164918 A G G MAGIX B missense_variant H/R 0 0.998799 Motifs|PWM|Zfp691, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|SMARCC1 3a -1.36 NA NA chrX 49021537 49165199 G C C MAGIX B missense_variant V/L 0 0.9989 Protein_Binding|ChIP-seq|GATA1 5 4.17 NA NA chrX 49022700 49166361 T C C MAGIX B missense_variant F/L 0 NA Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Caco2, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F4 4 0.554 NA NA chrX 53652852 53625891 T G T HUWE1 B missense_variant T/P 0 NA Chromatin_Structure|FAIRE|Astrocy, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|FAIRE|A549, Chromatin_Structure|FAIRE|Medullo 5 0.304 NA Macrocephaly|Intellectual disability|Macroorchidism|X-linked inheritance|Limited elbow extension|Tapered finger|Holoprosencephaly chrX 54209387 54182954 A G G FAM120C B missense_variant I/T 0 NA Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|FAIRE|Nhbe, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Hepatocytes, Protein_Binding|ChIP-seq|STAT1, Protein_Binding|ChIP-seq|CTCF 4 2.53 NA NA chrX 77298857 78043359 G A A ATP7A B missense_variant E/K 0 NA NA NA 5.21 NA Narrow face|Pes planus|Pes cavus|Hiatus hernia|Long face|Bladder carcinoma|Hypothermia|Genu valgum|Unsteady gait|Bladder diverticula|Distal muscle weakness|Osteoporosis|Distal amyotrophy|Death in childhood|Pelvic exostoses|Spinal muscular atrophy|Capitate-hamate fusion|Abnormality of the face|Chronic diarrhea|Platyspondyly|Metaphyseal spurs|Slow progression|Convex nasal ridge|Seizures|Intellectual disability|Ureteral obstruction|Broad clavicles|Narrow chest|Joint laxity|Intrauterine growth retardation|Pectus carinatum|Hyporeflexia|EMG: neuropathic changes|Orthostatic hypotension|Hypertonia|Coarse hair|Limited elbow extension|Long philtrum|Redundant skin|Sparse hair|Coxa valga|Kyphosis|Broad ribs|Long neck|Hypopigmentation of the skin|High forehead|Short stature|Persistent open anterior fontanelle|Short clavicles|Limited knee extension|Pectus excavatum|Carotid artery tortuosity|High palate|X-linked recessive inheritance|Distal sensory impairment|Juvenile onset|Abnormality of the peripheral nervous system|Metaphyseal widening|Wormian bones|Short humerus|Bruising susceptibility|Soft skin|Intracranial hemorrhage|Microcephaly|Hyperextensible skin|Cutis laxa|Brachycephaly|Hydronephrosis chrX 100547933 101292945 A G A TAF7L B missense_variant L/P 0.00602773 0.991669 Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Myometr 5 -2.79 NA NA chrX 100748078 101493091 A G G ARMCX4 B missense_variant D/G 0 NA Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Mcf7 5 -0.227 NA NA chrX 101138792 101883820 T C C ZMAT1 B missense_variant Q/R 0 NA Motifs|PWM|Hoxc9, Chromatin_Structure|FAIRE|A549 6 0.612 NA NA chrX 129147079 130013103 T C C BCORL1 B missense_variant F/L 0 NA Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891 5 3.35 NA NA chrX 154456747 155228465 A G G VBP1 B missense_variant M/V 0 NA NA NA 5.05 NA NA chr1 2357475 2426036 T C T PLCH2 A splice_region_variant,5_prime_UTR_variant - 0 NA Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Osteobl 5 -2.04 NA NA chr1 20512652 20186159 A C A UBXN10 B splice_region_variant,intron_variant - 0.00869963 NA Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Sknshra, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|USF2, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GATA2, Protein_Binding|ChIP-seq|CREBBP, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|REST, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|THAP1, Protein_Binding|ChIP-seq|FOXA1, Protein_Binding|ChIP-seq|CCNT2, Protein_Binding|ChIP-seq|HMGN3, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A 4 -1.77 NA NA chr1 38464639 37998967 C G C FHL3 B splice_region_variant,intron_variant - 0.00228938 0.998232 Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|Footprinting|ARP-1(COUP-TF2), Motifs|PWM|ARP-1(COUP-TF2), Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|FAIRE|Gm12891 6 0.674 NA NA chr1 45805566 45339894 G C G MUTYH B splice_region_variant,intron_variant - 0.00641026 NA Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|Footprinting|RREB1, Motifs|PWM|RREB1, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|FAIRE|Urotsa, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|GATA1, Protein_Binding|ChIP-seq|GABPA, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|TRIM28, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|HEY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MYC, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CDX2, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZBTB33, Protein_Binding|ChIP-seq|ZBTB33, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|CHD2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|BRCA1, Protein_Binding|ChIP-seq|ZBTB33, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCFL, Protein_Binding|ChIP-seq|NRF1, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A 2b -3.33 CANCER|CANCER|CANCER|CANCER Neoplasm of the skin|Adenomatous colonic polyposis|Somatic mutation|Autosomal dominant inheritance|Colon cancer|Autosomal recessive inheritance|Stomach cancer chr1 77627096 77161411 G A G PIGK B splice_region_variant,intron_variant - 0.00915751 0.987613 NA NA -0.381 NA NA chr1 83562661 83096978 A G A RP4-601K24.1 B splice_donor_variant,nc_transcript_variant - 0.00915751 NA NA NA 1.5 NA NA chr1 145471549 145963541 A C G ANKRD34A B splice_region_variant,intron_variant - 0.000457875 NA Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|Staf, Motifs|Footprinting|Staf, Motifs|Footprinting|Staf, Motifs|Footprinting|Staf, Motifs|Footprinting|znf143, Motifs|Footprinting|Staf, Motifs|Footprinting|znf143, Motifs|PWM|Staf, Motifs|PWM|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|znf143, Motifs|Footprinting|Staf, Motifs|Footprinting|Staf, Motifs|Footprinting|Staf, Motifs|Footprinting|znf143, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Hvmf, Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hcm, Chromatin_Structure|DNase-seq|Ag04449, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Ag10803, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|DNase-seq|Hpf, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Bj, Chromatin_Structure|DNase-seq|Hconf, Chromatin_Structure|DNase-seq|Hffmyc, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Ag09309, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|DNase-seq|Hre, Chromatin_Structure|DNase-seq|Nha, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hae, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hff, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hcpe, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Skmc, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hpdlf, Chromatin_Structure|DNase-seq|Hgf, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Aoaf, Protein_Binding|ChIP-seq|ETS1, Protein_Binding|ChIP-seq|GATA1 2b 4.08 NA NA chr1 222798106 222624764 G A G MIA3 B splice_region_variant,intron_variant - 0.00137363 0.996119 Motifs|PWM|Sox12 6 1.52 CARDIOVASCULAR|CARDIOVASCULAR NA chr2 32712875 32487808 A C C BIRC6 A splice_region_variant,intron_variant - 0 NA Motifs|PWM|Sox18, Chromatin_Structure|DNase-seq|Hmveclly 5 3.6 NA NA chr2 180835589 179970862 A G A CWC22 B splice_region_variant,intron_variant - 0.00228938 0.995663 Motifs|PWM|Sp1 6 -0.00658 NA NA chr2 215698828 214834104 C G C AC072062.1 B splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.00137363 NA NA NA -4.52 NA NA chr3 44869026 44827534 A T A KIF15 B splice_region_variant,intron_variant - 0.00274725 0.995002 Protein_Binding|ChIP-seq|SETDB1 5 0.544 NA NA chr3 48476431 48435021 C G G CCDC51 B splice_region_variant,intron_variant - 0.00961538 0.990448 Protein_Binding|ChIP-seq|RFX3 5 2.71 NA NA chr3 51273773 51236342 T C T DOCK3 B splice_region_variant,intron_variant - 0.00595238 0.991306 Motifs|PWM|HNF3beta, Motifs|PWM|FOXJ2, Motifs|PWM|FOXO4, Motifs|PWM|FOXO3, Motifs|PWM|Foxl1 6 5.37 PSYCH NA chr3 108464273 108745426 G C G RETNLB B splice_region_variant,intron_variant,nc_transcript_variant - 0.00412088 NA NA NA -0.0664 NA NA chr3 111659377 111940530 T C T PHLDB2 B splice_region_variant,intron_variant - 0.00641026 0.990311 Motifs|PWM|ATF4, Motifs|PWM|Tcfap2a 6 0.399 NEUROLOGICAL NA chr3 113619872 113901025 C T C GRAMD1C B splice_region_variant,intron_variant - 0.00824176 0.993157 NA NA 5.97 NA NA chr3 148986874 149269087 T G T CPHL1P B splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.003663 NA NA NA -2.75 NA NA chr4 118281965 117360809 A G A AC113617.1 B splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.000915751 NA Motifs|PWM|HTF, Motifs|PWM|Cdx 6 0.521 NA NA chr5 53697699 54401869 C T C LINC01033 B splice_region_variant,intron_variant,nc_transcript_variant - 0.00412088 NA Motifs|Footprinting|TBX15, Motifs|PWM|TBX15, Motifs|Footprinting|AFP1, Motifs|PWM|AFP1, Motifs|PWM|Eomes, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|H9es 5 -2.6 NA NA chr5 131719999 132384307 A G G SLC22A5 A splice_region_variant,intron_variant - 0 NA NA NA 3.56 IMMUNE|IMMUNE|IMMUNE|IMMUNE|HEMATOLOGICAL|HEMATOLOGICAL Myopathy|Lethargy|Cardiomegaly|Muscular hypotonia|Autosomal recessive inheritance|Hepatic steatosis|Congestive heart failure|Somnolence|Encephalopathy|Coma|Endocardial fibroelastosis|Hypertrophic cardiomyopathy|Vomiting|Hyperammonemia|Failure to thrive|Confusion|Muscle weakness|Recurrent hypoglycemia|Impaired gluconeogenesis|Elevated hepatic transaminases|Hepatomegaly chr5 142593652 143214087 C T C ARHGAP26 B splice_region_variant,synonymous_variant N 0.00686813 0.996231 Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|Gm12878, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hac, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Hmveclbl, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|FAIRE|Huvec, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm19240, Protein_Binding|ChIP-seq|BATF, Protein_Binding|ChIP-seq|BCL11A, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|RXRA, Protein_Binding|ChIP-seq|SP1, Protein_Binding|ChIP-seq|SRF, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|PAX5, Protein_Binding|ChIP-seq|FOSL1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|MEF2C, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|ZBTB7A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|EBF1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|FOS, Protein_Binding|ChIP-seq|JUND, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|IRF4, Protein_Binding|ChIP-seq|NFKB1 4 -1.73 NA Somatic mutation|Juvenile myelomonocytic leukemia chr6 33147589 33179812 T G T COL11A2 A splice_region_variant,intron_variant - 0 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Werirb1 5 2.43 NA Abnormality of the eye|Mixed hearing impairment|Depressed nasal bridge|Malar flattening|Bulbous nose|Flexion contracture|Pierre-Robin sequence|Autosomal dominant inheritance|Large tarsal bones|Autosomal recessive inheritance|Premature osteoarthritis|Short stature|Micrognathia|Sensorineural hearing impairment|Hypoplastic ilia|Dumbbell-shaped long bone|Anteverted nares|Enlarged epiphyses|Epiphyseal dysplasia|Platyspondyly (childhood)|Aplasia/Hypoplasia of the capital femoral epiphysis|Coronal cleft vertebrae|Bell-shaped thorax|Lumbar hyperlordosis|Short palm|Platyspondyly|Short phalanx of finger|Rhizomelia|Short nose|Metaphyseal widening|Cleft palate|Abnormality of pelvic girdle bone morphology|Midface retrusion|Global developmental delay|Thoracic hypoplasia|Prominent interphalangeal joints|Arthralgia|Proptosis|Flared metaphyses|Hypertelorism|Protuberant abdomen|Recurrent pneumonia|Short ribs|Enlarged joints|Short long bones|Hypoplastic ischia|Short metacarpal|Hypoplastic pubic bones chr6 74189574 73479851 G A A MTO1 A splice_region_variant,intron_variant - 0 NA Protein_Binding|ChIP-seq|SPI1 5 4.28 NA Metabolic acidosis|Hypoglycemia|Increased serum lactate|Lactic acidosis|Optic atrophy|Autosomal recessive inheritance|Small for gestational age|Arrhythmia|Hypertrophic cardiomyopathy|Congenital onset chr7 38813711 38774111 C T C VPS41 B splice_region_variant,intron_variant - 0.00412088 0.994541 NA NA 4.77 NEUROLOGICAL NA chr7 72483668 73013139 A G G RP11-313P13.3 B splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.00320513 NA NA NA 0 NA NA chr7 100391644 100794022 T C T ZAN B splice_region_variant,intron_variant - 0.00641026 0.991311 Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|Footprinting|Tcfcp2l1, Motifs|PWM|Tcfcp2l1 , Motifs|Footprinting|Tcfcp2l1, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Mcf7, Protein_Binding|ChIP-seq|CTCF 2b -9.34 IMMUNE NA chr7 103138517 103498070 C G C RELN B splice_region_variant,intron_variant - 0.00503663 0.990927 Motifs|PWM|Brachyury 6 0.293 PSYCH|PSYCH|OTHER|IMMUNE|PSYCH|CHEMDEPENDENCY Thick cerebral cortex|Microcephaly|Prominent nasal bridge|Sloping forehead|Autosomal recessive inheritance|Type I lissencephaly chr7 135095270 135410520 A G G CNOT4 A splice_region_variant,intron_variant - 0 0.99933 Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Hre 5 1.53 NA NA chr8 20813346 20955835 A G A RP11-369E15.4 B splice_donor_variant,nc_transcript_variant - 0.00320513 NA Motifs|PWM|Hand1:E47 6 -3.99 NA NA chr8 25181356 25323840 C T C DOCK5 C splice_region_variant,intron_variant - 0.00503663 0.994464 NA NA 4.04 NA NA chr8 31077901 31220385 A G A RP11-363L24.2 B splice_region_variant,intron_variant,nc_transcript_variant - 0.00503663 NA NA NA 0.118 PSYCH|CANCER NA chr8 59184565 58272006 C G C RP11-716D16.1 A splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0 NA NA NA -5.62 NA NA chr8 100975002 99962774 A G A RGS22 B splice_region_variant,intron_variant - 0.00274725 NA Motifs|PWM|Six4 6 3.48 NA NA chr8 144654586 NA NA NA NA MROH6 B splice_region_variant,intron_variant - 0.00869963 0.993229 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hmec 5 2.57 NA NA chr9 28475930 28475932 T C T LINGO2 B splice_region_variant,intron_variant - 0.000915751 NA NA NA -5.82 NA NA chr9 72373624 69758708 A G G PTAR1 A splice_region_variant,intron_variant - 0 NA NA NA 3.88 NA NA chr9 82187750 79572835 A G A TLE4 C splice_region_variant,5_prime_UTR_variant - 0.00869963 0.980111 Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Melano, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Nhlf, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hasp, Protein_Binding|ChIP-seq|POLR2A 4 3.47 IMMUNE NA chr9 131479023 128716744 T C T PKN3 B splice_region_variant,intron_variant - 0.00915751 0.985161 Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|POLR2A 4 5.26 NA NA chr9 131898880 129136601 A G A PPP2R4 B splice_region_variant,intron_variant - 0.00228938 0.996002 NA NA 0.969 NA NA chr9 133270740 130395353 T C C HMCN2 A splice_region_variant,intron_variant,nc_transcript_variant - 0 NA Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3 5 -4.61 NA NA chr9 133986980 131111593 T G G AIF1L A splice_region_variant,intron_variant - 0 NA NA NA -2.32 NA NA chr9 140139757 137245305 G A G FAM166A B splice_donor_variant - 0.003663 0.991081 Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|DNase-seq|Gm19240, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF 4 4.09 NA NA chr10 48359447 47379915 C G G ZNF488 B splice_region_variant,5_prime_UTR_variant - 0.00824176 NA Chromatin_Structure|FAIRE|Nhbe, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|T47d 5 -2.97 NA NA chr10 86185654 84425898 T G G CCSER2 A splice_region_variant,intron_variant - 0 NA Motifs|PWM|ATF5, Motifs|PWM|EWSR1-FLI1, Motifs|PWM|EWSR1-FLI1, Motifs|PWM|EWSR1-FLI1, Chromatin_Structure|DNase-seq|Huvec 5 4.96 NA NA chr10 99946328 98186571 C T C R3HCC1L B splice_region_variant,intron_variant - 0.00412088 NA Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Jurkat, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmmt 5 0.997 NA NA chr10 104476094 102716337 C T C SFXN2 B splice_region_variant,intron_variant - 0.00274725 NA Chromatin_Structure|DNase-seq|Hpaf, Chromatin_Structure|DNase-seq|Hcf, Chromatin_Structure|DNase-seq|Aoaf, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hasp 5 0.0973 NEUROLOGICAL NA chr10 124271589 122512073 G A G HTRA1 B splice_region_variant,intron_variant - 0.00137363 0.999385 NA NA -4.19 VISION|VISION|VISION Pseudobulbar signs|Ataxia|Abnormality of extrapyramidal motor function|Autosomal recessive inheritance|Dysarthria|Spasticity|Arteriosclerosis of small cerebral arteries|Gait disturbance|Diffuse demyelination of the cerebral white matter|Alopecia|Low back pain|Urinary incontinence|Progressive encephalopathy|Hyperreflexia|Babinski sign|Dementia|Diffuse white matter abnormalities|Rigidity chr11 726178 726178 G C C EPS8L2 A splice_region_variant,intron_variant - 0 NA Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|FAIRE|Gm12891, Protein_Binding|ChIP-seq|EGR1, Protein_Binding|ChIP-seq|EGR1 4 -4.12 NA NA chr11 49859661 49838109 A G A TRIM51FP B splice_region_variant,intron_variant,nc_transcript_variant - 0.00457875 NA NA NA 0.109 NA NA chr11 72532708 72821663 C T C ATG16L2 B splice_region_variant,intron_variant - 0.00412088 0.996689 Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Th2, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm06990, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|8988t, Protein_Binding|ChIP-seq|IKZF1 4 0.442 NA NA chr11 104761100 104890373 T C C CASP12 B splice_donor_variant - 0.00274725 NA NA NA 3.02 NA NA chr11 104776172 104905445 G T G RP11-693N9.2 B splice_region_variant,intron_variant,nc_transcript_variant - 0.00824176 NA Motifs|PWM|NUR77, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Cmk, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Hct116, Chromatin_Structure|DNase-seq|H7es, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Hmvecdblad, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Hmveclbl, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|RAD21, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|GATA6 3a 1.65 NA NA chr12 18499777 18346843 C G G PIK3C2G A splice_region_variant,intron_variant - 0 NA Motifs|PWM|Nkx2-4 6 -0.195 NA NA chr12 41946453 41552651 T C T PDZRN4 B splice_region_variant,intron_variant - 0.00503663 0.997693 Motifs|PWM|Foxa2, Motifs|PWM|Nkx6-1 6 4.84 IMMUNE|OTHER NA chr12 44338153 43944350 T A T TMEM117 B splice_region_variant,intron_variant - 0.00915751 0.982777 Motifs|PWM|Sox12 6 -8.02 NA NA chr12 54799450 54405666 A G G ITGA5 B splice_region_variant,synonymous_variant D 0.00228938 0.994849 Chromatin_Structure|DNase-seq|Werirb1 5 -6.28 NA NA chr12 74165368 73771588 T C T RP11-295G12.1 C splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.00686813 NA NA NA 0.109 NA NA chr12 122658383 122173836 A G A IL31 B splice_region_variant,intron_variant - 0.000915751 0.999462 NA NA -1.07 NA NA chr13 99093094 98440840 T C C FARP1 A splice_region_variant,intron_variant - 0 0.998461 Motifs|PWM|c-Myc:Max, Chromatin_Structure|DNase-seq|Saec, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Hre 5 1.48 NA NA chr14 22653518 22185622 C G G TRAV32 A splice_region_variant,intron_variant,nc_transcript_variant - 0 NA NA NA -2.48 NA NA chr14 51206021 50739303 A G A NIN B splice_region_variant,intron_variant - 0.00824176 0.991312 Motifs|PWM|C/EBPalpha, Motifs|Footprinting|C/EBPalpha, Motifs|PWM|Cdx2, Motifs|PWM|Hoxa10, Motifs|PWM|Hoxb13, Motifs|PWM|Hoxb9, Chromatin_Structure|DNase-seq|Panc1, Chromatin_Structure|FAIRE|Mcf7 5 1.67 NEUROLOGICAL Delayed skeletal maturation|Intellectual disability, severe|Abnormality of the carpal bones|Primary amenorrhea|Seizures|Autosomal recessive inheritance|Severe global developmental delay|Microtia|Intrauterine growth retardation|Microcephaly|Madelung deformity|Hip dysplasia|Central hypothyroidism|Lumbar scoliosis|Severe short stature|Hypotelorism|Prominent nose chr14 75412908 74946205 A G A PGF B splice_region_variant,intron_variant - 0.000915751 0.999692 Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Sknshra, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Medullo, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 4 -6.37 NA NA chr14 75517731 75051028 C G C MLH3 B splice_region_variant,intron_variant - 0.000457875 NA Motifs|Footprinting|, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Be2c, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hee, Chromatin_Structure|DNase-seq|Wi38, Chromatin_Structure|DNase-seq|Hrpe, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hmvecdlyad, Chromatin_Structure|DNase-seq|Hmvecdneo, Chromatin_Structure|DNase-seq|Hmveclly, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ag09319, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Hmvecdlyneo, Chromatin_Structure|DNase-seq|Hmec, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|E2F1 4 1.32 OTHER|CANCER Neoplasm of the stomach|Transitional cell carcinoma of the bladder|Autosomal dominant inheritance|Renal cell carcinoma|Uterine leiomyosarcoma|Hereditary nonpolyposis colorectal carcinoma|Endometrial carcinoma chr14 76232398 75766055 T C T TTLL5 B splice_region_variant,intron_variant - 0.0018315 0.995848 NA NA 3.64 NA NA chr15 38228216 37936015 C T C TMCO5A B splice_region_variant,intron_variant - 0.003663 NA NA NA 0.439 NA NA chr15 41483636 41191438 C T C EXD1 B splice_region_variant,intron_variant - 0.00228938 0.999077 Motifs|PWM|AIRE, Chromatin_Structure|FAIRE|Helas3 6 4.11 NA NA chr15 42764519 42472321 G C G ZNF106 B splice_region_variant,5_prime_UTR_variant - 0.00732601 NA Motifs|PWM|REST, Chromatin_Structure|DNase-seq|Hipe, Chromatin_Structure|DNase-seq|Ag04450, Chromatin_Structure|DNase-seq|Stellate 5 4.96 NA NA chr15 57918090 57625892 A G G GCOM1 A splice_region_variant,synonymous_variant Q 0 NA Chromatin_Structure|DNase-seq|Medullo 5 5.81 NA NA chr15 59732148 59439949 A C A FAM81A B splice_region_variant,intron_variant - 0.000457875 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|T47d, Protein_Binding|ChIP-seq|ESR1, Protein_Binding|ChIP-seq|ESR1 4 1.17 NA NA chr15 74212297 73919956 T C C LOXL1-AS1 A splice_region_variant,intron_variant,nc_transcript_variant - 0 NA Motifs|PWM|Rfx4, Chromatin_Structure|DNase-seq|Hl60 5 -2.87 NA NA chr15 78911261 78618919 T C T CHRNA3 B splice_region_variant,intron_variant - 0.00686813 0.99137 Chromatin_Structure|DNase-seq|Hl60 5 -9.71 CHEMDEPENDENCY|CANCER|CANCER|CARDIOVASCULAR|CANCER|CANCER|CANCER|CHEMDEPENDENCY|OTHER NA chr17 7906057 8002739 A G A GUCY2D B splice_region_variant,intron_variant - 0.000915751 NA Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|Footprinting|LUN-1, Motifs|PWM|LUN-1, Motifs|PWM|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|mTERF, Motifs|Footprinting|HOXA5, Motifs|Footprinting|RORA_1, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Gm12864, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|FAIRE|Helas3 5 3.74 NA Cone-rod dystrophy|Cataract|Decreased electroretinogram (ERG) amplitude|Pigmentary retinopathy|Intellectual disability|Autosomal dominant inheritance|Photophobia|Autosomal recessive inheritance|Fundus atrophy|Blindness|Decreased central vision|Sensorineural hearing impairment|Hyperthreoninemia|Growth delay|Keratoconus|Peripheral visual field loss|Hyperthreoninuria|Eye poking|Nystagmus|Hepatomegaly chr17 8141707 8238389 T C C CTC1 A splice_region_variant,intron_variant - 0 NA NA NA -3.51 NA Sparse hair|Abnormality of extrapyramidal motor function|Oral leukoplakia|Autosomal recessive inheritance|Blindness|Exudative retinopathy|Retinal telangiectasia|Short stature|Genu valgum|Osteoporosis|Anemia|Osteopenia|Phenotypic variability|Cerebral calcification|Tremor|Nail dysplasia|Hemiplegia|Metaphyseal sclerosis|Ataxia|Optic atrophy|Progressive disorder|Seizures|Postnatal growth retardation|Thrombocytopenia|Leukodystrophy|Dysarthria|Bone marrow hypocellularity|Scoliosis|Intestinal bleeding|Dystonia|Short femoral neck|Spasticity|Leukoencephalopathy|Mental deterioration|Intrauterine growth retardation|Infantile onset|Thin skin|Pathologic fracture chr17 18882991 18979678 T A T FAM83G C splice_region_variant,intron_variant - 0.00961538 NA Motifs|PWM|LUN-1, Motifs|Footprinting|LUN-1, Chromatin_Structure|DNase-seq|Fibrop 5 -1.78 NA NA chr17 35956263 1835328 T C NA SYNRG B splice_region_variant,intron_variant - 0.00641026 0.989851 Protein_Binding|ChIP-seq|RFX3 5 3.22 NA NA chr17 73328773 75332692 T C T GRB2 C splice_region_variant,intron_variant - 0.00869963 0.988082 Protein_Binding|ChIP-seq|NFYB 5 -1.46 NA NA chr18 21694618 24114654 G A A TTC39C A splice_region_variant,intron_variant - 0 0.999923 Motifs|PWM|Elf3, Motifs|PWM|Elf3, Motifs|PWM|Elf3, Motifs|PWM|Srf, Motifs|PWM|Srf, Motifs|PWM|Srf, Motifs|PWM|Srf, Protein_Binding|ChIP-seq|MEF2A 5 1.49 NA NA chr18 28611139 31031173 A C C DSC3 A splice_acceptor_variant - 0 0.999923 Chromatin_Structure|DNase-seq|K562, Protein_Binding|ChIP-seq|TAL1 4 4.33 OTHER Sparse/absent eyelashes|Hypotrichosis|Autosomal recessive inheritance|skin vesicle|Sparse scalp hair|Sparse axillary hair|Aplasia/Hypoplasia of the eyebrow chr18 55364852 57697620 A G A ATP8B1 B splice_region_variant,synonymous_variant D 0.00457875 0.99308 Chromatin_Structure|FAIRE|Medullo, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3Ifna4h 5 -1.16 OTHER|METABOLIC|IMMUNE|PSYCH Abnormal liver function tests during pregnancy|Biliary cirrhosis|Intrahepatic cholestasis|increased serum bile acid concentration during pregnancy|Pancreatitis|Jaundice|Autosomal dominant inheritance|Intrahepatic cholestasis with episodic jaundice|Pruritus|Autosomal recessive inheritance|Diarrhea|Cirrhosis|Splenomegaly|Failure to thrive|Infantile onset|Fat malabsorption|Severe short stature|Hepatomegaly|Intermittent jaundice|Premature birth|Conjugated hyperbilirubinemia chr18 56202059 58534827 A G A ALPK2 B splice_region_variant,intron_variant - 0.00412088 0.996002 Motifs|Footprinting|BRCA1:USF2, Motifs|PWM|BRCA1:USF2, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Th1, Chromatin_Structure|FAIRE|Medullo, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|YY1 2b 0.947 NA NA chr18 59805532 62138299 T C C PIGN A splice_acceptor_variant - 0 NA Motifs|PWM|Gm397, Chromatin_Structure|FAIRE|Medullo, Chromatin_Structure|DNase-seq|Wi38 5 5.34 NA Long philtrum|Patent ductus arteriosus|Narrow forehead|Depressed nasal bridge|Large fleshy ears|Autosomal recessive inheritance|Coarse facial features|Open mouth|Macrocephaly|Gastroesophageal reflux|Anal atresia|High palate|Overfolded helix|Anal stenosis|Nystagmus|Hyperreflexia|Tremor|Short nose|Seizures|Thin vermilion border|Global developmental delay|Polyhydramnios|Choreoathetosis|Defect in the atrial septum|Hyporeflexia|Hydronephrosis|Congenital onset chr19 8191238 8126354 C T C FBN3 B splice_region_variant,intron_variant - 0.00595238 0.998845 Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Panislets 5 -1.54 NA NA chr19 11221454 11110778 T C C LDLR A splice_region_variant,intron_variant - 0 NA Motifs|PWM|Elk-1, Motifs|PWM|Ehf, Motifs|PWM|Egr1, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Caco2, Chromatin_Structure|DNase-seq|Nhek, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A 3a 0.216 NEUROLOGICAL|CARDIOVASCULAR|CARDIOVASCULAR|METABOLIC|METABOLIC|CARDIOVASCULAR|INFECTION|METABOLIC|METABOLIC|OTHER|OTHER|OTHER|OTHER|METABOLIC|METABOLIC|METABOLIC|OTHER|METABOLIC|METABOLIC|METABOLIC|CARDIOVASCULAR|METABOLIC|INFECTION|METABOLIC|CARDIOVASCULAR|METABOLIC|METABOLIC|METABOLIC|METABOLIC|METABOLIC|METABOLIC Autosomal dominant inheritance|Premature coronary artery disease|Xanthelasma|Corneal arcus|Hypercholesterolemia chr19 36243813 35752912 G A A LIN37 A splice_acceptor_variant - 0 NA Motifs|PWM|BRCA1:USF2 6 4.31 NA NA chr19 41811730 41305825 T C T HNRNPUL1 B splice_region_variant,intron_variant - 0.00457875 0.990924 Motifs|Footprinting|ESR1, Motifs|Footprinting|ESR2, Motifs|Footprinting|ESR1, Motifs|PWM|ER, Motifs|PWM|ESR1, Motifs|PWM|ESR1, Motifs|PWM|ESR2, Motifs|Footprinting|ER, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Huh75 5 -9.33 NA NA chr19 44429469 43925317 G A G ZNF45 C splice_region_variant,intron_variant - 0.00457875 NA Motifs|PWM|Elf3 6 -1.03 NA NA chr20 13845987 13865341 C T C SEL1L2 B splice_region_variant,intron_variant - 0.003663 0.987534 Protein_Binding|ChIP-seq|POU5F1 5 3.54 NA NA chr20 24524218 24543582 C G C SYNDIG1 A splice_region_variant,intron_variant - 0 NA Motifs|PWM|Bhlhb2, Motifs|PWM|Arnt, Motifs|PWM|Arnt, Protein_Binding|ChIP-seq|USF1, Protein_Binding|ChIP-seq|USF1 5 4.5 NA NA chr20 43264927 44636286 C T C ADA B splice_region_variant,synonymous_variant V 0.00961538 0.984622 NA NA -6.77 INFECTION|REPRODUCTION|PSYCH|CARDIOVASCULAR Autoimmune thrombocytopenia|Autosomal recessive inheritance|Absent specific antibody response|Aplasia of the thymus|Severe B lymphocytopenia|Lymphopenia|B lymphocytopenia|Autoimmune hemolytic anemia|Diffuse mesangial sclerosis|Increased IgE level|Hepatomegaly|Platyspondyly|Asthma|Recurrent bacterial infections|Eosinophilia|Abnormality of pelvic girdle bone morphology|Diarrhea|Splenomegaly|Failure to thrive|Somatic mosaicism|Anterior rib cupping|Pneumonia|Sinusitis|Severe combined immunodeficiency|Recurrent viral infections|B-cell lymphoma|Recurrent fungal infections chr20 43366211 44737570 C A C RP11-445H22.4 B splice_region_variant,non_coding_exon_variant,nc_transcript_variant - 0.00137363 NA NA NA -1.24 NA NA chr20 62697751 64066398 T C T TCEA2 B splice_region_variant,intron_variant - 0.00503663 NA Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|FAIRE|Htr8, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Hpde6e6e7, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|UrotsaUt189, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MAX, Protein_Binding|ChIP-seq|USF2 4 -3.14 NA NA chr21 30660302 29287981 T C C BACH1 A splice_region_variant,intron_variant - 0 NA Motifs|PWM|MEF-2, Motifs|PWM|MEF-2, Motifs|PWM|Freac-7, Motifs|PWM|RSRFC4, Motifs|PWM|FOXJ2, Motifs|PWM|POU3F2, Motifs|PWM|TBP, Motifs|PWM|HNF3, Motifs|PWM|FOXO3A, Motifs|PWM|MEF2A 6 -3 NA NA chr21 37429679 36057381 G C C SETD4 A splice_region_variant,intron_variant - 0 NA Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hmf, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|Wi38, Protein_Binding|ChIP-seq|STAT3 4 0.235 NA NA chr22 22901579 22559172 A G G PRAME A splice_region_variant,intron_variant - 0 NA Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|PWM|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Motifs|Footprinting|COMP1, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Gm12891, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|FAIRE|UrotsaUt189, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|FAIRE|Urotsa, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Fibrobl, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|Huvec, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|ELF1, Protein_Binding|ChIP-seq|YY1, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF, Protein_Binding|ChIP-seq|CTCF 2b -1.14 NA NA chrX 54117740 54091307 C A C FAM120C B splice_region_variant,intron_variant - 0.00301386 0.995551 NA NA -0.921 NA NA chrX 126930311 127796330 A G A RP1-107N3.2 B splice_region_variant,intron_variant,nc_transcript_variant - 0 NA NA NA 1.07 NA NA chrX 153170980 153905526 T G T AVPR2 B splice_region_variant,intron_variant - 0.00180832 NA Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Hsmmt, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Hl60, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Gm12891 5 1.29 RENAL Polyuria|Feeding difficulties in infancy|Increased urinary sodium|Seizures|Intellectual disability|Irritability|Hypernatremia|Short stature|Vomiting|Hypertonic dehydration|Failure to thrive|Constipation|Elevated systolic blood pressure|Polydipsia|Lower urinary tract dilatation|Hyponatremia|Unexplained fevers|X-linked recessive inheritance|Neonatal onset|Decreased circulating renin level