Chr Start End Ref Alt Func.refGene Gene.refGene GeneDetail.refGene ExonicFunc.refGene AAChange.refGene Xref.refGene cytoBand ExAC_ALL ExAC_AFR ExAC_AMR ExAC_EAS ExAC_FIN ExAC_NFE ExAC_OTH ExAC_SAS avsnp150 SIFT_score SIFT_pred Polyphen2_HDIV_score Polyphen2_HDIV_pred Polyphen2_HVAR_score Polyphen2_HVAR_pred LRT_score LRT_pred MutationTaster_score MutationTaster_pred MutationAssessor_score MutationAssessor_pred FATHMM_score FATHMM_pred PROVEAN_score PROVEAN_pred VEST3_score CADD_raw CADD_phred DANN_score fathmm-MKL_coding_score fathmm-MKL_coding_pred MetaSVM_score MetaSVM_pred MetaLR_score MetaLR_pred integrated_fitCons_score integrated_confidence_value GERP++_RS phyloP7way_vertebrate phyloP20way_mammalian phastCons7way_vertebrate phastCons20way_mammalian SiPhy_29way_logOdds GME_AF GME_NWA GME_NEA GME_AP GME_Israel GME_SD GME_TP GME_CA chr1 1541728 1541728 G A UTR3 SSU72 NM_014188:c.*338C>T . . . 1p36.33 . . . . . . . . rs1046878 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 1541864 1541864 T C UTR3 SSU72 NM_014188:c.*202A>G . . . 1p36.33 . . . . . . . . rs7290 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 11750617 11750617 G A UTR3 AGTRAP NM_001040196:c.*513G>A;NM_001040194:c.*425G>A;NM_001040197:c.*558G>A;NM_001040195:c.*513G>A;NM_020350:c.*425G>A . . . 1p36.22 . . . . . . . . rs1128059 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 11750634 11750634 C T UTR3 AGTRAP NM_001040196:c.*530C>T;NM_001040194:c.*442C>T;NM_001040197:c.*575C>T;NM_001040195:c.*530C>T;NM_020350:c.*442C>T . . . 1p36.22 . . . . . . . . rs1128065 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 15428752 15428752 C T UTR3 EFHD2 NM_024329:c.*28C>T . . . 1p36.21 0.2045 0.0543 0.2677 0.3021 0.2865 0.188 0.1829 0.2589 rs3765372 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 16014266 16014266 T C UTR3 HSPB7 NM_001349683:c.*1314A>G;NM_001349682:c.*1314A>G;NM_001349688:c.*1314A>G;NM_001349687:c.*1314A>G;NM_001349686:c.*1314A>G;NM_001349689:c.*1314A>G;NM_001349685:c.*1314A>G;NM_014424:c.*1314A>G . . . 1p36.13 . . . . . . . . rs1048334 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 20652339 20652339 T C UTR3 DDOST NM_005216:c.*40A>G . . . 1p36.12 0.8695 0.782 0.8247 0.8308 0.9099 0.885 0.8908 0.8925 rs6893 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 31908724 31908724 G A UTR3 PTP4A2 NM_001369859:c.*128C>T;NM_001369858:c.*128C>T;NM_080391:c.*128C>T;NM_001195100:c.*128C>T;NM_001195101:c.*128C>T;NM_001369860:c.*128C>T . . . 1p35.2 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 32231462 32231462 T C UTR3 EIF3I NM_003757:c.*266T>C . . . 1p35.2 . . . . . . . . rs1137921 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 32231470 32231470 C A UTR3 EIF3I NM_003757:c.*274C>A . . . 1p35.2 . . . . . . . . rs1137947 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 33323781 33323781 C T UTR3 PHC2 NM_001330488:c.*1084G>A;NM_198040:c.*1084G>A;NM_004427:c.*1084G>A . . . 1p35.1 . . . . . . . . rs7264 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 40072429 40072429 G A UTR3 CAP1;PPT1 NM_001350479:c.*896G>A;NM_001350480:c.*896G>A;NM_001350482:c.*896G>A;NM_001105530:c.*896G>A;NM_001350476:c.*896G>A;NM_001350478:c.*896G>A;NM_001350483:c.*896G>A;NM_006367:c.*896G>A;NM_001330502:c.*896G>A;NM_001350475:c.*896G>A;NM_001350485:c.*896G>A;NM_001350484:c.*896G>A;NM_001350477:c.*896G>A;NM_001350481:c.*896G>A;NM_001142604:c.*1632C>T;NM_001363695:c.*1632C>T . . . 1p34.2 . . . . . . . . rs7300 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 53085380 53085380 T C UTR3 PODN NM_001199081:c.*895T>C;NM_153703:c.*895T>C;NM_001199080:c.*895T>C . . . 1p32.3 . . . . . . . . rs189580852 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 54218252 54218252 G A UTR3 MRPL37 NM_016491:c.*3G>A . . . 1p32.3 0.1921 0.1264 0.2432 0.4733 0.1734 0.1434 0.1751 0.2558 rs6621 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 56567621 56567621 T C intronic PLPP3 . . . . 1p32.2 . . . . . . . . rs11800883 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 86862842 86862842 C T UTR3 SELENOF NM_004261:c.*632G>A;NM_203341:c.*705G>A . . . 1p22.3 . . . . . . . . rs5859 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 94529935 94529935 C T UTR3 F3 NM_001993:c.*525G>A;NM_001178096:c.*536G>A . . . 1p21.3 . . . . . . . . rs841692 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 109062683 109062683 T G intergenic WDR47;TAF13 dist=20455;dist=1457 . . . 1p13.3 . . . . . . . . rs8856 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 109737079 109737079 C T exonic GSTM3 . nonsynonymous SNV GSTM3:NM_000849:exon9:c.G670A:p.V224I . 1p13.3 0.3415 0.0996 0.4552 0.7378 0.2952 0.2921 0.3326 0.4253 rs7483 1 T 0 B 0 B 0.632 N 1 P -0.69 N 4.94 T -0.01 N 0.095 0.049 3.077 0.52 0.002 N -0.926 T 0 T 0.707 0 -5.25 -1.345 -1.576 0.026 0.008 1.767 0.293051 0.191919 0.228261 0.307018 0.25 0.336207 0.362805 0.416667 chr1 113982039 113982039 C A UTR3 OLFML3 NM_001286353:c.*270C>A;NM_001286352:c.*270C>A;NM_020190:c.*270C>A . . . 1p13.2 . . . . . . . . rs7364 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 115337511 115337511 G A ncRNA_intronic NGF-AS1 . . . . 1p13.2 . . . . . . . . rs17540656 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 151695605 151695605 T G UTR3 SNX27 NM_001330723:c.*1188T>G;NM_030918:c.*2004T>G . . . 1q21.3 . . . . . . . . rs1308136 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 153547465 153547465 G A ncRNA_intronic LOC101928034 . . . . 1q21.3 . . . . . . . . rs41265160 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 153547505 153547505 C G ncRNA_intronic LOC101928034 . . . . 1q21.3 . . . . . . . . rs73026350 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 156292862 156292862 A C UTR3 GLMP NM_001256604:c.*182T>G;NM_001256605:c.*182T>G;NM_001256609:c.*182T>G;NM_001256608:c.*150T>G;NM_144580:c.*182T>G . . . 1q22 . . . . . . . . rs6800 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 156596404 156596404 C A exonic GPATCH4 . synonymous SNV "GPATCH4:NM_015590:exon6:c.G423T:p.G141G,GPATCH4:NM_182679:exon6:c.G408T:p.G136G" . 1q22 0.0211 0.0019 0.1815 0.0269 0.0148 0.0009 0.0132 0.0022 rs147014962 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.001007 0 0 0.002924 0 0 0.003049 0 chr1 159976868 159976868 C A ncRNA_exonic LINC01133 . . . . 1q23.2 . . . . . . . . rs192707170 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 162784045 162784045 T C UTR3 DDR2 NM_001354983:c.*3799T>C;NM_001354982:c.*3799T>C;NM_001014796:c.*3799T>C;NM_006182:c.*3799T>C . . "Spondylometaepiphyseal dysplasia, short limb-hand type, Autosomal recessive" 1q23.3 . . . . . . . . rs12311 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 165655562 165655562 G T UTR3 MGST3 NM_004528:c.*58G>T . . . 1q24.1 . . . . . . . . rs8133 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 167918178 167918178 C T UTR3 MPC2 NM_015415:c.*145G>A;NM_001143674:c.*145G>A . . . 1q24.2 . . . . . . . . rs1050037 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 170739135 170739135 A G UTR3 PRRX1 NM_006902:c.*3105A>G;NM_022716:c.*2949A>G . . "Agnathia-otocephaly complex, Autosomal recessive, Autosomal dominant" 1q24.2 . . . . . . . . rs143805931 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 183142906 183142906 G C UTR3 LAMC1 NM_002293:c.*116G>C . . . 1q25.3 . . . . . . . . rs3359 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 183145499 183145499 G A UTR3 LAMC1 NM_002293:c.*2709G>A . . . 1q25.3 . . . . . . . . rs7473 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 200406081 200406081 G A UTR3 ZNF281 NM_001281294:c.*937C>T;NM_001281293:c.*937C>T;NM_012482:c.*937C>T . . . 1q32.1 . . . . . . . . rs1128817 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 201465612 201465612 G A UTR3 PHLDA3 NM_012396:c.*629C>T . . . 1q32.1 . . . . . . . . rs1053592 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 214603264 214603264 C G UTR5 CENPF NM_016343:c.-10491C>G . . "Stromme syndrome, Autosomal recessive" 1q41 . . . . . . . . rs3748691 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 240531955 240531955 C T intronic GREM2 . . . "Tooth agenesis, selective, 9, Autosomal dominant" 1q43 . . . . . . . . rs12129547 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 245749538 245749538 C T UTR3 SMYD3 NM_022743:c.*25G>A;NM_001167740:c.*25G>A . . . 1q44 0.295 0.2925 0.3227 0.4413 0.2433 0.2521 0.2975 0.3937 rs8025 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246239109 246239109 A T intronic SMYD3 . . . . 1q44 . . . . . . . . rs72774489 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246245320 246245320 G A intronic SMYD3 . . . . 1q44 . . . . . . . . rs12142735 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246245333 246245333 T C intronic SMYD3 . . . . 1q44 . . . . . . . . rs1770008 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246245351 246245351 G A intronic SMYD3 . . . . 1q44 . . . . . . . . rs77575757 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246255975 246255975 T C intronic SMYD3 . . . . 1q44 . . . . . . . . rs12122710 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246269727 246269727 T C intronic SMYD3 . . . . 1q44 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246269738 246269738 A T intronic SMYD3 . . . . 1q44 . . . . . . . . rs12083380 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246285154 246285154 T C intronic SMYD3 . . . . 1q44 . . . . . . . . rs2334003 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr1 246310904 246310904 G A intronic SMYD3 . . . . 1q44 . . . . . . . . rs3753685 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 8858331 8858331 C G UTR3 MBOAT2 NM_001321266:c.*348G>C;NM_001321267:c.*348G>C;NM_001321265:c.*348G>C;NM_138799:c.*348G>C . . . 2p25.1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 27377008 27377008 T G UTR3 SNX17 NM_001267060:c.*289T>G;NM_014748:c.*289T>G;NM_001267061:c.*289T>G;NM_001267059:c.*289T>G . . . 2p23.3 . . . . . . . . rs1104 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 27381412 27381412 A G UTR3 PPM1G NM_177983:c.*187T>C . . . 2p23.3 . . . . . . . . rs4582 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 28800883 28800883 A G UTR3 PPP1CB NM_206876:c.*1580A>G;NM_002709:c.*1580A>G . . . 2p23.2 . . . . . . . . rs7475 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 38070027 38070027 C A UTR3 CYP1B1 NM_000104:c.*695G>T . . "Anterior segment dysgenesis 6, multiple subtypes;Glaucoma 3A, primary open angle, congenital, juvenile, or adult onset, Autosomal recessive" 2p22.2 . . . . . . . . rs10916 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 42350625 42350625 G A UTR3 COX7A2L NM_004718:c.*594C>T;NM_001319040:c.*707C>T;NM_001319037:c.*594C>T;NM_001319036:c.*594C>T . . . 2p21 . . . . . . . . rs183700067 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 46858815 46858815 C T ncRNA_exonic LINC01119 . . . . 2p21 . . . . . . . . rs2278713 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 53958004 53958004 A G intronic PSME4 . . . . 2p16.2 . . . . . . . . rs805335 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 73729997 73729997 A G exonic TPRKB . synonymous SNV "TPRKB:NM_001330389:exon5:c.T474C:p.I158I,TPRKB:NM_001330391:exon5:c.T375C:p.I125I,TPRKB:NM_001330392:exon5:c.T375C:p.I125I,TPRKB:NM_016058:exon5:c.T474C:p.I158I,TPRKB:NM_001330386:exon6:c.T591C:p.I197I,TPRKB:NM_001330387:exon6:c.T591C:p.I197I,TPRKB:NM_001330388:exon6:c.T474C:p.I158I,TPRKB:NM_001330390:exon6:c.T420C:p.I140I" . 2p13.1 0.6452 0.3738 0.5532 0.708 0.7082 0.6762 0.6645 0.6853 rs7210 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.623992 0.590909 0.591033 0.646199 0.6 0.646552 0.674847 0.640152 chr2 85394936 85394936 T C exonic CAPG . nonsynonymous SNV "CAPG:NM_001320734:exon9:c.A911G:p.H304R,CAPG:NM_001256139:exon10:c.A1004G:p.H335R,CAPG:NM_001256140:exon10:c.A959G:p.H320R,CAPG:NM_001320732:exon10:c.A1004G:p.H335R,CAPG:NM_001320733:exon10:c.A1004G:p.H335R,CAPG:NM_001747:exon10:c.A1004G:p.H335R" . 2p11.2 0.5882 0.7336 0.3346 0.4937 0.6073 0.6342 0.5969 0.529 rs6886 0.477 T 0 B 0 B 0.001 N 1 P -0.31 N 0.64 T 0.76 N 0.066 1.45 13.05 0.916 0.217 N -1.007 T 0 T 0.706 0 3.9 0.002 0.069 0.966 0.995 8.092 0.56754 0.626263 0.595109 0.555556 0.4 0.551724 0.579268 0.55303 chr2 85593250 85593250 A G UTR3 VAMP5 NM_006634:c.*93A>G . . . 2p11.2 . . . . . . . . rs1049359 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 85597128 85597128 T C exonic RNF181 . nonsynonymous SNV RNF181:NM_016494:exon4:c.T352C:p.Y118H . 2p11.2 0.098 0.4595 0.0838 0.311 0.0561 0.0304 0.0892 0.0588 rs6643 1 T 0 B 0 B 0.005 N 1 P 0.07 N -0.24 T 0.49 N 0.119 1.442 13 0.78 0.156 N -0.975 T 0 T 0.722 0 4.31 -0.422 0.069 0.97 0.999 10.751 0.075025 0.050505 0.095109 0.090643 0 0.068966 0.054878 0.064394 chr2 85787973 85787973 G A UTR3 ATOH8 NM_032827:c.*1083G>A . . . 2p11.2 . . . . . . . . rs734042 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 96185092 96185092 T A UTR3 STARD7 NM_020151:c.*1638A>T . . . 2q11.2 . . . . . . . . rs11164061 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 105361089 105361089 G A UTR3 FHL2 NM_001318899:c.*194C>T;NM_001318897:c.*194C>T;NM_001039492:c.*194C>T;NM_001318896:c.*194C>T;NM_001318898:c.*194C>T;NM_201555:c.*194C>T;NM_201557:c.*194C>T;NM_001318895:c.*194C>T;NM_001450:c.*194C>T;NM_001318894:c.*194C>T . . . 2q12.2 . . . . . . . . rs2278500 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 108687039 108687039 C A UTR3 LIMS1 NM_001193483:c.*3040C>A;NM_004987:c.*3040C>A;NM_001193488:c.*3040C>A;NM_001193482:c.*3040C>A;NM_001193484:c.*3040C>A;NM_001193485:c.*3040C>A . . . 2q12.3 . . . . . . . . rs1064830 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 112588935 112588935 A C UTR3 CHCHD5 NM_001304353:c.*46A>C;NM_032309:c.*46A>C;NM_001371323:c.*46A>C;NM_001371322:c.*46A>C;NM_001304354:c.*46A>C . . . 2q14.1 0.784 0.8 0.7642 0.6609 0.6579 0.8094 0.775 0.8009 rs1047652 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 113957956 113957956 G A UTR3 ACTR3 NM_005721:c.*501G>A;NM_001277140:c.*501G>A . . . 2q14.1 . . . . . . . . rs6642 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 129923637 129923637 G C ncRNA_exonic PLAC9P1 . . . . 2q21.1 . . . . . . . . rs74331317 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 130346476 130346476 C T UTR3 IMP4 NM_001320304:c.*8C>T;NM_001320305:c.*8C>T;NM_001320306:c.*8C>T;NM_001320307:c.*8C>T;NM_001320309:c.*8C>T;NM_001320310:c.*8C>T;NM_001320311:c.*8C>T;NM_033416:c.*8C>T . . . 2q21.1 0.2265 0.0844 0.2883 0.4454 0.314 0.1315 0.2255 0.3557 rs11542414 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 132645034 132645034 C T UTR3 LYPD1 NM_001321234:c.*1011G>A;NM_001321235:c.*1011G>A;NM_001077427:c.*1011G>A;NM_144586:c.*1011G>A . . . 2q21.2 . . . . . . . . rs1131671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 135761843 135761843 T C exonic UBXN4 . synonymous SNV UBXN4:NM_014607:exon6:c.T534C:p.T178T . 2q21.3 4.19E-05 0 0.0003 0.0002 0 0 0 0 rs541090511 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 161339780 161339780 C T intronic PSMD14 . . . . 2q24.2 . . . . . . . . rs202065137 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 171557952 171557952 G A UTR3 CYBRD1 NM_001256909:c.*3125G>A;NM_001127383:c.*3303G>A;NM_024843:c.*3125G>A . . . 2q31.1 . . . . . . . . rs528 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 176136650 176136650 A G ncRNA_exonic HOXD-AS2;LOC401021 . . . . 2q31.1 . . . . . . . . rs3731795 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 190200027 190200027 C T exonic C2orf88 . nonsynonymous SNV "C2orf88:NM_001042519:exon2:c.C167T:p.T56I,C2orf88:NM_001042520:exon2:c.C167T:p.T56I,C2orf88:NM_032321:exon2:c.C167T:p.T56I,C2orf88:NM_001042521:exon3:c.C167T:p.T56I" . 2q32.2 0.2706 0.4776 0.2192 0.4728 0.1421 0.2449 0.2733 0.2336 rs6753459 0.569 T 0 B 0.001 B 0.971 N 1 P . . 0.86 T -1.07 N 0.343 -0.902 0.026 0.331 0.019 N -0.91 T 0 T 0.707 0 -3 -0.435 -2.169 0.001 0 8.761 0.329809 0.323232 0.372283 0.345029 0.35 0.353448 0.262195 0.242424 chr2 200389233 200389233 A G exonic SPATS2L . nonsynonymous SNV SPATS2L:NM_001282744:exon3:c.A79G:p.T27A . 2q33.1 0.3886 0.2667 0.3929 0.264 0.3828 0.4303 0.371 0.3629 rs842823 0.103 T 0.018 B 0.01 B . . 1 P . . . . -0.75 N 0.178 2.185 17.41 0.979 0.206 N -0.991 T 0 T 0.706 0 -0.499 0.042 0.157 0.994 0.987 7.664 . . . . . . . . chr2 216672167 216672167 G T UTR3 IGFBP5 NM_000599:c.*4584C>A . . . 2q35 . . . . . . . . rs189995238 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 217799910 217799910 T G UTR3 TNS1 NM_022648:c.*4549A>C;NM_001308022:c.*4549A>C;NM_001308023:c.*4549A>C . . . 2q35 . . . . . . . . rs3747 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 231461706 231461706 C T exonic NCL . synonymous SNV NCL:NM_005381:exon3:c.G447A:p.E149E . 2q37.1 0.2898 0.4519 0.3469 0.5924 0.2597 0.1939 0.2737 0.39 rs1131171 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.271903 0.277778 0.251359 0.219298 0.35 0.25 0.320122 0.329545 chr2 236571466 236571466 C T intronic ACKR3 . . . . 2q37.3 . . . . . . . . rs76008828 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 237098529 237098529 G C UTR3 COPS8 NM_198189:c.*787G>C;NM_006710:c.*787G>C . . . 2q37.3 . . . . . . . . rs7485 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 237324109 237324109 C A UTR3 COL6A3 NM_057167:c.*665G>T;NM_004369:c.*665G>T;NM_057166:c.*665G>T . . "Bethlem myopathy 1, Autosomal recessive, Autosomal dominant;Dystonia 27, Autosomal recessive;Ullrich congenital muscular dystrophy 1, Autosomal recessive, Autosomal dominant" 2q37.3 . . . . . . . . rs1050785 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr2 238910074 238910074 T C UTR3 TWIST2 NM_001271893:c.*268T>C . . "Ablepharon-macrostomia syndrome, Autosomal dominant;Barber-Say syndrome, Autosomal dominant;Focal facial dermal dysplasia 3, Setleis type, Autosomal recessive" 2q37.3 . . . . . . . . rs927585189 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 9780230 9780230 C T UTR3 TADA3 NM_006354:c.*127G>A;NM_001278270:c.*127G>A . . . 3p25.3 . . . . . . . . rs14204 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 13638188 13638188 T A UTR3 FBLN2 NM_001998:c.*269T>A;NM_001004019:c.*269T>A;NM_001165035:c.*269T>A . . . 3p25.1 0.2448 0.229 0.3571 0.229 0.1574 0.2083 0.2443 0.2794 rs1061390 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 13638195 13638195 C A UTR3 FBLN2 NM_001998:c.*276C>A;NM_001004019:c.*276C>A;NM_001165035:c.*276C>A . . . 3p25.1 0.2425 0.2303 0.355 0.2286 0.1482 0.2089 0.2312 0.2787 rs1061398 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 13638208 13638208 C A UTR3 FBLN2 NM_001998:c.*289C>A;NM_001004019:c.*289C>A;NM_001165035:c.*289C>A . . . 3p25.1 0.2396 0.1624 0.3434 0.2233 0.1507 0.2115 0.2366 0.2779 rs12968 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 69105192 69105192 C G UTR3 ARL6IP5 NM_006407:c.*556C>G . . . 3p14.1 . . . . . . . . rs7039 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 105576617 105576617 G A UTR3 ALCAM NM_001627:c.*2166G>A;NM_001243280:c.*2166G>A . . . 3q13.11 . . . . . . . . rs1157 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 105679208 105679208 A G intronic CBLB . . . . 3q13.11 . . . . . . . . rs10460778 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 123612448 123612448 G A ncRNA_intronic MYLK-AS1 . . . . 3q21.1 . . . . . . . . rs78974757 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 128620110 128620110 T C UTR3 RPN1 NM_002950:c.*301A>G . . . 3q21.3 . . . . . . . . rs1127030 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 141925932 141925932 G C UTR3 ATP1B3 NM_001679:c.*231G>C . . . 3q23 . . . . . . . . rs11844 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 149027449 149027449 A G UTR3 GYG1 NM_001184721:c.*458A>G;NM_001184720:c.*516A>G;NM_004130:c.*516A>G . . "Polyglucosan body myopathy 2, Autosomal recessive" 3q24 . . . . . . . . rs3347 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 156540416 156540416 T C UTR3 SSR3 NM_001308205:c.*2787A>G;NM_001308204:c.*2787A>G;NM_001308197:c.*2787A>G;NM_007107:c.*2787A>G . . . 3q25.31 . . . . . . . . rs1129125 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 156540530 156540530 T C UTR3 SSR3 NM_001308205:c.*2673A>G;NM_001308204:c.*2673A>G;NM_001308197:c.*2673A>G;NM_007107:c.*2673A>G . . . 3q25.31 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr3 184184055 184184055 C T UTR3 AP2M1 NM_001025205:c.*439C>T;NM_001311198:c.*439C>T;NM_004068:c.*439C>T . . . 3q27.1 . . . . . . . . rs117568608 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 39498894 39498894 T C UTR3 UGDH NM_001184701:c.*1249A>G;NM_001184700:c.*1249A>G;NM_003359:c.*1249A>G . . . 4p14 . . . . . . . . rs1450 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 56490422 56490422 A G exonic SRP72 . synonymous SNV "SRP72:NM_001267722:exon12:c.A1227G:p.L409L,SRP72:NM_006947:exon14:c.A1410G:p.L470L" "Bone marrow failure syndrome 1, Autosomal dominant" 4q12 0.0415 0.0118 0.0469 0.1889 0.0259 0.0224 0.0265 0.0636 rs17086879 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.02568 0 0.013587 0.017544 0 0.025862 0.036585 0.087121 chr4 77036977 77036977 G A UTR3 SEPTIN11 NM_018243:c.*2465G>A;NM_001306147:c.*2465G>A . . . 4q21.1 . . . . . . . . rs1127587 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 77037232 77037232 C T UTR3 SEPTIN11 NM_018243:c.*2720C>T;NM_001306147:c.*2720C>T . . . 4q21.1 . . . . . . . . rs145482398 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 79905758 79905758 A C UTR3 ANTXR2 NM_001286780:c.*1671T>G;NM_058172:c.*1671T>G;NM_001286781:c.*1671T>G . . "Hyaline fibromatosis syndrome, Autosomal recessive" 4q21.21 . . . . . . . . rs2760 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 98472462 98472462 C T UTR3 TSPAN5 NM_005723:c.*60G>A . . . 4q23 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 118279119 118279119 C T ncRNA_exonic SNHG8 . . . . 4q26 . . . . . . . . rs658642 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 146189780 146189780 A G UTR3 LSM6 NM_007080:c.*124A>G . . . 4q31.22 . . . . . . . . rs78408400 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 153781265 153781265 C G UTR3 SFRP2 NM_003013:c.*186G>C . . . 4q31.3 . . . . . . . . rs79071507 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 173332027 173332027 T C UTR3 HMGB2 NM_001130689:c.*53A>G;NM_001130688:c.*53A>G;NM_002129:c.*53A>G . . . 4q34.1 . . . . . . . . rs73005353 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr4 185190485 185190485 T C exonic CFAP97 . nonsynonymous SNV "CFAP97:NM_001292033:exon2:c.A712G:p.T238A,CFAP97:NM_020827:exon2:c.A712G:p.T238A" . 4q35.1 0.4797 0.2946 0.4652 0.5903 0.5077 0.5067 0.4866 0.4213 rs1133657 0.158 T 0.061 B 0.023 B 0.004 N 1 P 0.69 N 1.59 T 0.13 N 0.011 -0.677 0.082 0.805 0.525 D -0.953 T 0 T 0.757 0 4.35 0.991 0.122 0.125 0.017 11.184 0.391742 0.363636 0.369565 0.359649 0.3 0.327586 0.472561 0.458333 chr5 95748427 95748427 G A exonic RHOBTB3 . synonymous SNV RHOBTB3:NM_014899:exon4:c.G510A:p.A170A . 5q15 0.4439 0.3002 0.3529 0.7083 0.4585 0.4276 0.4394 0.5201 rs34896 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.43001 0.378788 0.388587 0.403509 0.4 0.465517 0.457317 0.522727 chr5 95916890 95916890 C A intronic ELL2 . . . . 5q15 . . . . . . . . rs9314162 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 96695865 96695865 A G exonic CAST . synonymous SNV "CAST:NM_001042440:exon3:c.A168G:p.Q56Q,CAST:NM_001042441:exon3:c.A168G:p.Q56Q,CAST:NM_001330626:exon3:c.A168G:p.Q56Q,CAST:NM_001330627:exon3:c.A168G:p.Q56Q,CAST:NM_001330628:exon3:c.A123G:p.Q41Q,CAST:NM_001330629:exon3:c.A123G:p.Q41Q,CAST:NM_001750:exon3:c.A168G:p.Q56Q,CAST:NM_001042442:exon4:c.A168G:p.Q56Q" "Peeling skin with leukonychia, acral punctate keratoses, cheilitis, and knuckle pads, Autosomal recessive" 5q15 0.2161 0.1341 0.2479 0.2416 0.2563 0.2097 0.1961 0.2392 rs9667 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.174395 0.173469 0.169837 0.134503 0.2 0.137931 0.222561 0.174242 chr5 103029482 103029482 G A UTR3 PAM NM_001319943:c.*417G>A;NM_001364593:c.*417G>A;NM_001364594:c.*417G>A;NM_001364584:c.*417G>A;NM_001364586:c.*417G>A;NM_001364583:c.*417G>A;NM_001364585:c.*417G>A;NM_001364587:c.*417G>A;NM_001364588:c.*417G>A;NM_001364591:c.*417G>A;NM_001364589:c.*417G>A;NM_001364592:c.*417G>A;NM_001364590:c.*417G>A;NM_001364582:c.*417G>A;NM_138766:c.*417G>A;NM_138822:c.*417G>A;NM_000919:c.*417G>A;NM_138821:c.*417G>A;NM_001177306:c.*417G>A . . . 5q21.1 . . . . . . . . rs5855 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 111731000 111731000 T C exonic NREP . nonsynonymous SNV "NREP:NM_001142483:exon3:c.A128G:p.E43G,NREP:NM_001142474:exon4:c.A230G:p.E77G,NREP:NM_001142475:exon4:c.A260G:p.E87G,NREP:NM_004772:exon4:c.A128G:p.E43G,NREP:NM_001142476:exon5:c.A128G:p.E43G,NREP:NM_001142477:exon5:c.A128G:p.E43G,NREP:NM_001142478:exon5:c.A128G:p.E43G,NREP:NM_001142479:exon5:c.A128G:p.E43G,NREP:NM_001142480:exon5:c.A128G:p.E43G,NREP:NM_001142481:exon5:c.A128G:p.E43G,NREP:NM_001142482:exon5:c.A128G:p.E43G" . 5q22.1 0.0571 0.0285 0.0444 0.2073 0.0179 0.0534 0.043 0.0371 rs11559 0.145 T 0.012 B 0.016 B 0.093 N 1 P . . 0.6 T -4.75 D 0.421 -1.057 0.012 0.919 0.287 N -1.064 T 0 T 0.707 0 0.269 0.991 0.129 0.024 0.003 3.024 0.047506 0.021739 0.057534 0.035398 0.2 0.035714 0.048148 0.0375 chr5 139683743 139683743 G A UTR3 CXXC5 NM_001317201:c.*836G>A;NM_001317202:c.*836G>A;NM_001317199:c.*836G>A;NM_016463:c.*836G>A;NM_001317204:c.*836G>A;NM_001317203:c.*836G>A;NM_001317200:c.*836G>A;NM_001317205:c.*836G>A;NM_001317207:c.*836G>A;NM_001317206:c.*836G>A;NM_001317211:c.*836G>A;NM_001317210:c.*836G>A;NM_001317208:c.*836G>A;NM_001317209:c.*836G>A . . . 5q31.2 . . . . . . . . rs10051390 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 140245279 140245279 T C UTR3 PFDN1 NM_002622:c.*695A>G . . . 5q31.3 . . . . . . . . rs7204 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 140245285 140245285 A G UTR3 PFDN1 NM_002622:c.*689T>C . . . 5q31.3 . . . . . . . . rs7203 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 151661589 151661589 G C UTR3 SPARC NM_003118:c.*1982C>G;NM_001309444:c.*1866C>G;NM_001309443:c.*1982C>G . . "Osteogenesis imperfecta, type XVII, Autosomal recessive" 5q33.1 . . . . . . . . rs3549 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 168666259 168666259 G A UTR3 SLIT3 NM_001271946:c.*195C>T;NM_003062:c.*195C>T . . . 5q34 . . . . . . . . rs78851140 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 172969447 172969447 G A exonic RPL26L1 . nonsynonymous SNV "RPL26L1:NM_001317980:exon4:c.G344A:p.R115Q,RPL26L1:NM_001317981:exon4:c.G344A:p.R115Q,RPL26L1:NM_001317982:exon4:c.G344A:p.R115Q,RPL26L1:NM_016093:exon4:c.G344A:p.R115Q" . 5q35.1 0.0028 9.63E-05 0.0002 0.0379 0 0 0 0.0007 rs146701102 0.001 D 0.048 B 0.045 B 0 D 1 D 2.775 M . . -3.83 D 0.309 4.94 25 0.999 0.946 D -0.765 T 0.071 T 0.707 0 2.69 0 0.728 0.993 0.981 10.55 . . . . . . . . chr5 176392620 176392620 T C UTR3 CLTB NM_007097:c.*154A>G;NM_001364126:c.*154A>G;NM_001834:c.*154A>G . . . 5q35.2 . . . . . . . . rs5866 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr5 177306615 177306615 T C UTR3 MXD3;PRELID1 NM_001142935:c.*504A>G;NM_013237:c.*45T>C;NM_001271828:c.*45T>C . . . 5q35.3 0.8375 0.9394 0.7568 0.5248 0.825 0.8826 0.8563 0.7969 rs9834 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 18264427 18264427 G A UTR5 DEK NM_001134709:c.-440C>T;NM_003472:c.-440C>T . . "Leukemia, acute nonlymphocytic" 6p22.3 0.4311 0.2037 0.3906 0.4467 0.4643 0.4496 0.4839 0.4269 rs9383352 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 26055844 26055844 G C exonic HIST1H1C . synonymous SNV HIST1H1C:NM_005319:exon1:c.C585G:p.P195P . 6p22.2 0.1682 0.0656 0.1093 0.1575 0.2166 0.2124 0.1443 0.0823 rs8384 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.068983 0.070707 0.059783 0.02924 0.1 0.086207 0.103659 0.102273 chr6 26104052 26104052 T C exonic HIST1H4C . synonymous SNV HIST1H4C:NM_003542:exon1:c.T105C:p.I35I . 6p22.2 0.1838 0.2456 0.1228 0.1581 0.2085 0.2125 0.1498 0.0775 rs2229768 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.103223 0.141414 0.116848 0.076023 0.05 0.103448 0.10061 0.098485 chr6 29945567 29945567 G T UTR3 HLA-A NM_001242758:c.*112G>T;NM_002116:c.*112G>T . . . 6p22.1 . . . . . . . . rs13395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 29945597 29945597 C G UTR3 HLA-A NM_001242758:c.*142C>G;NM_002116:c.*142C>G . . . 6p22.1 . . . . . . . . rs1061815 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 29945653 29945653 C T UTR3 HLA-A NM_001242758:c.*198C>T;NM_002116:c.*198C>T . . . 6p22.1 . . . . . . . . rs112863520 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 29945706 29945706 T C UTR3 HLA-A NM_001242758:c.*251T>C;NM_002116:c.*251T>C . . . 6p22.1 . . . . . . . . rs79244404 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 30064718 30064718 A G UTR3 ZNRD1 NM_170783:c.*21A>G;NM_001278785:c.*21A>G;NM_001278786:c.*21A>G;NM_014596:c.*21A>G . . . 6p22.1 0.1517 0.2691 0.2204 0.2158 0.045 0.1228 0.1402 0.1602 rs1048412 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 30345563 30345563 G C exonic RPP21;TRIM39-RPP21 . nonsynonymous SNV "RPP21:NM_001199120:exon3:c.G255C:p.Q85H,RPP21:NM_001199121:exon3:c.G231C:p.Q77H,RPP21:NM_024839:exon3:c.G231C:p.Q77H,TRIM39-RPP21:NM_001199119:exon8:c.G1278C:p.Q426H" . 6p22.1 0.3195 0.3521 0.1936 0.2439 0.218 0.3062 0.2902 0.4029 rs6986 0.464 T 0.997 D 0.975 D 0.03 N 0.344 P 0.77 N 0.94 T -0.83 N 0.314 4.505 24.3 0.992 0.928 D -0.917 T 0.098 T 0.442 0 4.66 0.917 1.044 1 1 10.845 0.362788 0.363158 0.360054 0.409574 0.3 0.392857 0.317901 0.337121 chr6 30346789 30346789 T G exonic RPP21;TRIM39-RPP21 . synonymous SNV "RPP21:NM_001199120:exon5:c.T468G:p.T156T,RPP21:NM_024839:exon5:c.T444G:p.T148T,TRIM39-RPP21:NM_001199119:exon10:c.T1491G:p.T497T" . 6p22.1 0.2973 0.295 0.4895 0.4417 0.2772 0.2333 0.3326 0.3438 rs1060065 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.318627 0.292929 0.327446 0.202128 0.5 0.280702 0.362805 0.329545 chr6 30346790 30346790 C A exonic RPP21;TRIM39-RPP21 . nonsynonymous SNV "RPP21:NM_001199120:exon5:c.C469A:p.Q157K,RPP21:NM_024839:exon5:c.C445A:p.Q149K,TRIM39-RPP21:NM_001199119:exon10:c.C1492A:p.Q498K" . 6p22.1 0.2973 0.2949 0.4893 0.4416 0.2772 0.2333 0.3326 0.3438 rs974963 0.188 T 0.003 B 0.006 B 0.106 N 1 P 0.55 N 1.52 T -0.4 N 0.081 1.911 15.66 0.692 0.315 N -1.082 T 0.034 T 0.707 0 3.1 0.871 -0.023 0.068 0.004 11.662 0.318627 0.292929 0.327446 0.202128 0.5 0.275862 0.362805 0.329545 chr6 31354026 31354026 G A UTR3 HLA-B NM_005514:c.*275C>T . . . 6p21.33 . . . . . . . . rs3180225 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31354030 31354030 G A UTR3 HLA-B NM_005514:c.*271C>T . . . 6p21.33 . . . . . . . . rs2770 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31354079 31354079 A G UTR3 HLA-B NM_005514:c.*222T>C . . . 6p21.33 . . . . . . . . rs2768 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31354105 31354105 G A UTR3 HLA-B NM_005514:c.*196C>T . . . 6p21.33 . . . . . . . . rs2769 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31354106 31354106 G A UTR3 HLA-B NM_005514:c.*195C>T . . . 6p21.33 . . . . . . . . rs1056429 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31354129 31354129 A G UTR3 HLA-B NM_005514:c.*172T>C . . . 6p21.33 . . . . . . . . rs1093 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31637671 31637671 C G UTR3 PRRC2A NM_004638:c.*85C>G;NM_080686:c.*85C>G . . . 6p21.33 . . . . . . . . rs7889 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31669957 31669957 A T UTR3 CSNK2B NM_001320:c.*31A>T;NM_001282385:c.*31A>T . . . 6p21.33 0.3281 0.052 0.4164 0.3799 0.2998 0.3493 0.3793 0.3193 rs5872 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 31727266 31727266 A G exonic DDAH2 . synonymous SNV "DDAH2:NM_001303007:exon6:c.T829C:p.L277L,DDAH2:NM_001303008:exon7:c.T829C:p.L277L,DDAH2:NM_013974:exon7:c.T829C:p.L277L" . 6p21.33 0.0145 0.0022 0.0014 0.0104 0 0.0009 0.0172 0.0918 rs145447627 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.016885 0 0.002717 0.005319 0.05 0.017544 0.009146 0.05303 chr6 33299895 33299895 A G UTR3 TAPBP NM_003190:c.*1865T>C;NM_172209:c.*1865T>C . . "Bare lymphocyte syndrome, type I, Autosomal recessive" 6p21.32 . . . . . . . . rs1059288 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 36602589 36602589 T C UTR3 SRSF3 NM_003017:c.*600T>C . . . 6p21.2 . . . . . . . . rs7344 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 36964551 36964551 A G UTR3 PI16 NM_001199159:c.*184A>G;NM_153370:c.*184A>G . . . 6p21.2 . . . . . . . . rs1063021 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 36964795 36964795 T C UTR3 PI16 NM_001199159:c.*428T>C;NM_153370:c.*428T>C . . . 6p21.2 . . . . . . . . rs1046279 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 37483138 37483138 T C UTR3 CCDC167 NM_138493:c.*48A>G . . . 6p21.2 0.6867 0.8432 0.7055 0.4663 0.6457 0.7088 0.6738 0.6125 rs10692 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 44113981 44113981 G A exonic MRPL14 . synonymous SNV "MRPL14:NM_001318771:exon2:c.C198T:p.F66F,MRPL14:NM_001318767:exon3:c.C300T:p.F100F,MRPL14:NM_001318768:exon3:c.C300T:p.F100F,MRPL14:NM_001318769:exon3:c.C333T:p.F111F,MRPL14:NM_001318770:exon3:c.C459T:p.F153F,MRPL14:NM_032111:exon3:c.C300T:p.F100F" . 6p21.1 0.5809 0.7725 0.744 0.8063 0.5269 0.5188 0.5795 0.5001 rs6883 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.592649 0.575758 0.65625 0.614035 0.65 0.603448 0.469512 0.560606 chr6 85495605 85495605 T G UTR3 NT5E NM_001204813:c.*1601T>G;NM_002526:c.*1601T>G . . "Calcification of joints and arteries, Autosomal recessive" 6q14.3 . . . . . . . . rs6922 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 132814747 132814747 A G UTR5 RPS12 NM_001016:c.-22A>G . . . 6q23.2 0.4872 0.7321 0.627 0.3073 0.4181 0.4383 0.478 0.5562 rs9483504 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 144095171 144095171 A C UTR3 SF3B5 NM_031287:c.*66T>G . . . 6q24.2 . . . . . . . . rs183215566 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 151358403 151358403 T A UTR3 AKAP12 NM_005100:c.*2689T>A;NM_144497:c.*2689T>A;NM_001370346:c.*2689T>A . . . 6q25.1 . . . . . . . . rs184136052 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr6 159798305 159798305 G A UTR3 MRPL18 NM_001318817:c.*186G>A;NM_014161:c.*182G>A . . . 6q25.3 . . . . . . . . rs4739 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 260547 260547 T C UTR3 FAM20C NM_020223:c.*567T>C . . "Raine syndrome, Autosomal recessive" 7p22.3 . . . . . . . . rs1134015 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 22813024 22813024 T A UTR3 TOMM7 NM_019059:c.*146A>T . . . 7p15.3 . . . . . . . . rs1054471 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 37906945 37906945 A G UTR3 SFRP4 NM_003014:c.*534T>C . . "Pyle disease, Autosomal recessive" 7p14.1 . . . . . . . . rs1052969 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 37951787 37951787 C T UTR3 EPDR1 NM_001242946:c.*1584C>T;NM_017549:c.*1391C>T;NM_001242948:c.*1391C>T . . . 7p14.1 . . . . . . . . rs1376261 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 42937644 42937644 T C UTR3 MRPL32 NM_031903:c.*68T>C . . . 7p14.1 . . . . . . . . rs631928 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 43625026 43625026 G T UTR3 STK17A NM_004760:c.*184G>T . . . 7p13 . . . . . . . . rs699509 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 45076187 45076187 G A UTR3 CCM2 NM_001167935:c.*130G>A;NM_001167934:c.*130G>A;NM_031443:c.*130G>A;NM_001363458:c.*130G>A;NM_001363459:c.*130G>A;NM_001029835:c.*130G>A . . "Cerebral cavernous malformations-2, Autosomal dominant" 7p13 0.0011 0.0133 0 0.0048 0 0 0 0.0004 rs369819599 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 80655687 80655687 C T intronic CD36 . . . "Platelet glycoprotein IV deficiency, Autosomal recessive" 7q21.11 . . . . . . . . rs1054517 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 80655753 80655753 G A intronic CD36 . . . "Platelet glycoprotein IV deficiency, Autosomal recessive" 7q21.11 . . . . . . . . rs1133344 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 93886681 93886681 T G UTR3 TFPI2 NM_001271004:c.*210A>C;NM_001271003:c.*139A>C;NM_006528:c.*139A>C . . . 7q21.3 . . . . . . . . rs4517 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 93886765 93886765 C T UTR3 TFPI2 NM_001271004:c.*126G>A;NM_001271003:c.*55G>A;NM_006528:c.*55G>A . . . 7q21.3 . . . . . . . . rs4264 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 99396242 99396242 T C UTR3 PDAP1 NM_014891:c.*440A>G . . . 7q22.1 . . . . . . . . rs189504181 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 101129564 101129564 G A intronic SERPINE1 . . . "Plasminogen activator inhibitor-1 deficiency, Autosomal recessive, Autosomal dominant" 7q22.1 . . . . . . . . rs3020623 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 101139248 101139248 G A UTR3 SERPINE1 NM_000602:c.*1806G>A . . "Plasminogen activator inhibitor-1 deficiency, Autosomal recessive, Autosomal dominant" 7q22.1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 113116939 113116939 G A UTR3 SMIM30 NM_001352688:c.*460C>T;NM_001352687:c.*460C>T . . . 7q31.1 . . . . . . . . rs1051997 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 116506657 116506657 A G UTR3 CAV2 NM_198212:c.*498A>G;NM_001206747:c.*536A>G;NM_001233:c.*536A>G;NM_001206748:c.*536A>G . . . 7q31.2 . . . . . . . . rs1055850 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 128859025 128859025 G A ncRNA_intronic FLNC-AS1 . . . . 7q32.1 . . . . . . . . rs3188410 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 134788841 134788841 A C intronic CALD1 . . . . 7q33 . . . . . . . . rs3778841 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 141006231 141006231 G A UTR3 MRPS33 NM_016071:c.*199C>T;NM_053035:c.*199C>T . . . 7q34 . . . . . . . . rs9274 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr7 143268987 143268987 C G ncRNA_intronic LOC105375545 . . . . 7q34 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 11838843 11838843 T C UTR3 FDFT1 NM_001287744:c.*234T>C;NM_001287743:c.*234T>C;NM_001287742:c.*234T>C;NM_001287756:c.*234T>C;NM_001287745:c.*234T>C;NM_004462:c.*234T>C;NM_001287747:c.*234T>C;NM_001287748:c.*234T>C;NM_001287749:c.*234T>C;NM_001287750:c.*234T>C;NM_001287751:c.*234T>C . . . 8p23.1 . . . . . . . . rs3258 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 27672859 27672859 G C UTR3 SCARA3 NM_016240:c.*1508G>C . . . 8p21.1 . . . . . . . . rs485609 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 30063262 30063262 T C UTR3 SARAF NM_016127:c.*626A>G;NM_001284239:c.*626A>G . . . 8p12 . . . . . . . . rs189597388 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 32628906 32628906 G C intronic NRG1 . . . . 8p12 . . . . . . . . rs4733366 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 53966723 53966723 T C UTR3 TCEA1 NM_006756:c.*1381A>G;NM_201437:c.*1381A>G . . . 8q11.23 . . . . . . . . rs1050523 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 60621869 60621869 A G UTR3 RAB2A NM_001242644:c.*1100A>G;NM_002865:c.*1100A>G . . . 8q12.2 . . . . . . . . rs7413 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 63015187 63015187 T C UTR3 GGH NM_003878:c.*145A>G . . . 8q12.3 . . . . . . . . rs17279558 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 69660769 69660769 G A UTR3 SULF1 NM_015170:c.*2234G>A;NM_001128204:c.*2234G>A;NM_001128206:c.*2234G>A;NM_001128205:c.*2234G>A . . . 8q13.3 . . . . . . . . rs3087714 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 94261788 94261788 T C intronic GEM . . . . 8q22.1 . . . . . . . . rs2445715 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 97726133 97726133 T C UTR3 MTDH NM_001363138:c.*1463T>C;NM_001363137:c.*1463T>C;NM_178812:c.*1463T>C;NM_001363136:c.*1463T>C;NM_001363139:c.*1463T>C . . . 8q22.1 . . . . . . . . rs1311 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 103228310 103228310 T G UTR3 BAALC NM_024812:c.*211T>G;NM_001024372:c.*317T>G;NM_001364874:c.*211T>G . . . 8q22.3 . . . . . . . . rs143077439 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 118046295 118046295 T G intronic EXT1 . . . "Chondrosarcoma, Autosomal recessive;Exostoses, multiple, type 1, Autosomal dominant" 8q24.11 . . . . . . . . rs10505325 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 121612374 121612374 C T UTR3 HAS2 NM_005328:c.*1735G>A . . . 8q24.13 . . . . . . . . rs7013984 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 121641007 121641007 A G ncRNA_intronic HAS2-AS1 . . . . 8q24.13 . . . . . . . . rs1057308 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 123527147 123527147 C T intronic FBXO32 . . . . 8q24.13 . . . . . . . . rs79450183 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr8 143612720 143612720 G C UTR3 TSTA3 NM_001317783:c.*190C>G;NM_003313:c.*190C>G . . . 8q24.3 . . . . . . . . rs2978 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 37436928 37436928 A G UTR3 GRHPR NM_012203:c.*146A>G . . "Hyperoxaluria, primary, type II, Autosomal recessive" 9p13.2 . . . . . . . . rs1057507 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 89316518 89316518 T C UTR3 CKS2 NM_001827:c.*93T>C . . . 9q22.2 . . . . . . . . rs14867 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 120869767 120869767 A G exonic PHF19 . synonymous SNV PHF19:NM_001009936:exon5:c.T543C:p.S181S . 9q33.2 0.7157 0.6033 0.8589 0.5558 0.6766 0.7087 0.701 0.8016 rs1056567 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.732724 0.586735 0.73913 0.761765 0.75 0.784483 0.757862 0.75 chr9 122144177 122144177 C T UTR3 NDUFA8 NM_014222:c.*64G>A . . . 9q33.2 . . . . . . . . rs6822 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 127505498 127505498 C G UTR3 NIBAN2 NM_001035534:c.*1347G>C;NM_022833:c.*1347G>C . . . 9q34.11 . . . . . . . . rs1277 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 127505577 127505577 G C UTR3 NIBAN2 NM_001035534:c.*1268C>G;NM_022833:c.*1268C>G . . . 9q34.11 . . . . . . . . rs1276 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 127867954 127867954 G T UTR3 AK1 NM_000476:c.*54C>A;NM_001318121:c.*54C>A;NM_001318122:c.*54C>A . . "Hemolytic anemia due to adenylate kinase deficiency, Autosomal recessive" 9q34.11 . . . . . . . . rs4226 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 128633445 128633445 G T ncRNA_intronic MIR1268A . . . . 9q34.11 . . . . . . . . rs74995813 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 129347349 129347349 G A ncRNA_exonic LINC01503 . . . . 9q34.11 . . . . . . . . rs4837360 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 129722503 129722503 T C UTR3 PRRX2 NM_016307:c.*151T>C . . . 9q34.11 . . . . . . . . rs1051445 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 129722514 129722514 C G UTR3 PRRX2 NM_016307:c.*162C>G . . . 9q34.11 . . . . . . . . rs28441121 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 136673235 136673235 G A UTR3 AGPAT2 NM_001012727:c.*517C>T;NM_006412:c.*517C>T . . "Lipodystrophy, congenital generalized, type 1, Autosomal recessive" 9q34.3 . . . . . . . . rs10320 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 136673310 136673310 G C UTR3 AGPAT2 NM_001012727:c.*442C>G;NM_006412:c.*442C>G . . "Lipodystrophy, congenital generalized, type 1, Autosomal recessive" 9q34.3 . . . . . . . . rs6951 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 136724914 136724914 C G ncRNA_exonic SNHG7 . . . . 9q34.3 . . . . . . . . rs6866 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 137039568 137039568 G A UTR3 NPDC1 NM_015392:c.*204C>T . . . 9q34.3 . . . . . . . . rs6605 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr9 137039655 137039655 G A UTR3 NPDC1 NM_015392:c.*117C>T . . . 9q34.3 . . . . . . . . rs6604 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 1040176 1040176 C T ncRNA_intronic IDI2-AS1 . . . . 10p15.3 . . . . . . . . rs1285 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 3136623 3136623 G C UTR3 PFKP NM_001323069:c.*44G>C;NM_002627:c.*44G>C;NM_001323071:c.*44G>C;NM_001323068:c.*44G>C;NM_001323067:c.*44G>C;NM_001323072:c.*44G>C;NM_001242339:c.*44G>C;NM_001345944:c.*44G>C;NM_001323070:c.*44G>C;NM_001323074:c.*44G>C;NM_001323073:c.*44G>C . . . 10p15.2 0.1616 0.0822 0.1924 0.2767 0.1819 0.144 0.1418 0.1917 rs9063 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 3779135 3779135 A T UTR3 KLF6 NM_001160124:c.*404T>A;NM_001160125:c.*418T>A;NM_001300:c.*404T>A . . "Gastric cancer, somatic;Prostate cancer, somatic" 10p15.2 0.2122 0.029 0.1687 0.2074 0 0.2223 0.1111 0.2229 rs7634 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 3779369 3779369 G A UTR3 KLF6 NM_001160124:c.*170C>T;NM_001160125:c.*184C>T;NM_001300:c.*170C>T . . "Gastric cancer, somatic;Prostate cancer, somatic" 10p15.2 0.3662 0.1398 0.375 0.5679 0.3824 0.4029 0.5 0.349 rs17731 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 4977767 4977767 G A UTR3 AKR1C1 NM_001353:c.*25G>A . . . 10p15.1 0.4507 0.6096 0.6254 0.5632 0.566 0.3805 0.4514 0.4041 rs8483 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 7807725 7807725 T C UTR3 ATP5F1C NM_001320886:c.*97T>C;NM_005174:c.*63T>C;NM_001001973:c.*97T>C . . . 10p14 . . . . . . . . rs4655 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 12167753 12167753 T C exonic NUDT5 . synonymous SNV "NUDT5:NM_001321647:exon9:c.A600G:p.A200A,NUDT5:NM_014142:exon10:c.A609G:p.A203A,NUDT5:NM_001321648:exon11:c.A351G:p.A117A" . 10p14 0.4763 0.448 0.5277 0.5574 0.4459 0.4949 0.4229 0.3556 rs6686 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.381672 0.464646 0.39538 0.353801 0.4 0.344828 0.368902 0.375 chr10 48446152 48446152 A G UTR3 ARHGAP22 NM_001256025:c.*239T>C;NM_001347738:c.*239T>C;NM_001256026:c.*239T>C;NM_001256024:c.*239T>C;NM_001347735:c.*239T>C;NM_021226:c.*239T>C . . . 10q11.22 . . . . . . . . rs1051509 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 71302731 71302731 G A UTR3 UNC5B NM_170744:c.*3454G>A;NM_001244889:c.*3454G>A . . . 10q22.1 . . . . . . . . rs946980 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 71816550 71816550 C T UTR3 PSAP NM_002778:c.*891G>A;NM_001042466:c.*891G>A;NM_001042465:c.*891G>A . . "Combined SAP deficiency, Autosomal recessive;Gaucher disease, atypical;Krabbe disease, atypical, Autosomal recessive;Metachromatic leukodystrophy due to SAP-b deficiency, Autosomal recessive" 10q22.1 . . . . . . . . rs7869 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 74119753 74119753 T A UTR3 VCL NM_014000:c.*1584T>A;NM_003373:c.*1584T>A . . "Cardiomyopathy, dilated, 1W;Cardiomyopathy, hypertrophic, 15" 10q22.2 . . . . . . . . rs703258 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 86970555 86970555 T C exonic ADIRF . synonymous SNV ADIRF:NM_006829:exon3:c.T204C:p.I68I . 10q23.2 0.5513 0.3923 0.3999 0.7984 0.6551 0.5648 0.5694 0.5193 rs4869 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.525176 0.520202 0.504076 0.54386 0.7 0.543103 0.557927 0.515152 chr10 86970617 86970617 C T UTR5;UTR3 AGAP11;ADIRF NM_133447:c.-31106C>T;NM_006829:c.*35C>T . . . 10q23.2 0.4572 0.2603 0.3 0.669 0.5507 0.4819 0.4624 0.4227 rs7960 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 87747531 87747531 C A UTR3 PAPSS2 NM_004670:c.*1561C>A;NM_001015880:c.*1561C>A . . "Brachyolmia 4 with mild epiphyseal and metaphyseal changes, Autosomal recessive" 10q23.31 . . . . . . . . rs1058798 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 93482229 93482229 C A UTR5 MYOF NM_133337:c.-35G>T;NM_013451:c.-35G>T . . . 10q23.33 0.1924 0.1212 0.2164 0.5208 0.2293 0.164 0.2138 0.145 rs882873 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 95237678 95237678 T C UTR3 PDLIM1 NM_020992:c.*247A>G . . . 10q23.33 . . . . . . . . rs4235 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 95237832 95237832 A G UTR3 PDLIM1 NM_020992:c.*93T>C . . . 10q23.33 . . . . . . . . rs1049961 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 100986474 100986474 C T UTR3 MRPL43 NM_001308396:c.*69G>A;NM_032112:c.*260G>A . . . 10q24.31 . . . . . . . . rs7184 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 102676884 102676884 C T UTR3 ARL3 NM_004311:c.*10G>A . . . 10q24.32 0.1436 0.0536 0.2544 0.4239 0.0717 0.0853 0.1344 0.2407 rs8354 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 117490872 117490872 G A ncRNA_exonic EMX2OS . . . . 10q26.11 . . . . . . . . rs242964 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr10 128109280 128109280 G C exonic MKI67 . nonsynonymous SNV "MKI67:NM_001145966:exon12:c.C1480G:p.L494V,MKI67:NM_002417:exon13:c.C2560G:p.L854V" . 10q26.2 0.1881 0.3163 0.2242 0.2817 0.1234 0.1687 0.1634 0.1385 rs2240 1 T 0 B 0 B 0.231 N 1 P 0 N 5.02 T 0.91 N 0.005 -2.21 0.001 0.057 0.003 N -0.926 T 0 T 0.707 0 -2.73 -3.145 -1.159 0 0 1.125 0.186304 0.19697 0.203804 0.187135 0.2 0.12069 0.158537 0.181818 chr11 252733 252733 T C UTR3 PSMD13 NM_175932:c.*133T>C;NM_002817:c.*133T>C . . . 11p15.5 . . . . . . . . rs1045405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 252735 252735 T C UTR3 PSMD13 NM_175932:c.*135T>C;NM_002817:c.*135T>C . . . 11p15.5 . . . . . . . . rs2948222 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 309127 309127 A G exonic IFITM2 . nonsynonymous SNV IFITM2:NM_006435:exon2:c.A361G:p.I121V . 11p15.5 0.4185 0.5638 0.4902 0.6877 0.3303 0.3297 0.4209 0.5351 rs1059091 0.062 T 0 B 0.002 B . . 1 P 2.115 M -2.15 D -0.24 N 0.075 0.062 3.207 0.388 0.033 N -0.947 T 0 T 0.733 0 -3.77 -1.247 -0.327 0 0.001 4.32 0.453172 0.484848 0.445652 0.403509 0.35 0.310345 0.432927 0.530303 chr11 840034 840034 C A UTR3 POLR2L NM_021128:c.*338G>T . . . 11p15.5 . . . . . . . . rs11246327 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 1938477 1938477 C T exonic TNNT3 . synonymous SNV "TNNT3:NM_001367851:exon11:c.C558T:p.G186G,TNNT3:NM_001367852:exon11:c.C558T:p.G186G,TNNT3:NM_001367850:exon13:c.C705T:p.G235G,TNNT3:NM_001367844:exon14:c.C738T:p.G246G,TNNT3:NM_001367849:exon14:c.C750T:p.G250G,TNNT3:NM_001042780:exon15:c.C738T:p.G246G,TNNT3:NM_001042782:exon15:c.C738T:p.G246G,TNNT3:NM_001367842:exon15:c.C756T:p.G252G,TNNT3:NM_001367843:exon15:c.C756T:p.G252G,TNNT3:NM_001367845:exon15:c.C738T:p.G246G,TNNT3:NM_001042781:exon16:c.C756T:p.G252G,TNNT3:NM_001297646:exon16:c.C738T:p.G246G,TNNT3:NM_001367847:exon16:c.C771T:p.G257G,TNNT3:NM_001367848:exon16:c.C759T:p.G253G,TNNT3:NM_006757:exon16:c.C762T:p.G254G,TNNT3:NM_001363561:exon17:c.C771T:p.G257G,TNNT3:NM_001367846:exon18:c.C795T:p.G265G" "Arthyrgryposis, distal, type 2B, Autosomal dominant" 11p15.5 0.1452 0.0367 0.0763 0.3489 0.1836 0.1546 0.167 0.1002 rs4727 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.147029 0.131313 0.162125 0.102339 0.25 0.12931 0.179878 0.113636 chr11 4138699 4138699 C A UTR3 RRM1 NM_001318064:c.*316C>A;NM_001033:c.*316C>A;NM_001318065:c.*316C>A;NM_001330193:c.*316C>A . . . 11p15.4 . . . . . . . . rs1042927 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 6612958 6612958 G A UTR3 TPP1 NM_000391:c.*1588C>T . . "Ceroid lipofuscinosis, neuronal, 2, Autosomal recessive;Spinocerebellar ataxia, autosomal recessive 7, Autosomal recessive" 11p15.4 . . . . . . . . rs7487 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 12263543 12263543 C T UTR3 MICAL2 NM_001346298:c.*1023C>T;NM_001346299:c.*1023C>T;NM_001282665:c.*1023C>T;NM_001282667:c.*3371C>T;NM_001282666:c.*3371C>T . . . 11p15.3 . . . . . . . . rs8808 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 33705434 33705434 A G UTR3 CD59 NM_203330:c.*4692T>C;NM_203329:c.*4692T>C;NM_203331:c.*4692T>C;NM_000611:c.*4692T>C;NM_001127227:c.*4692T>C;NM_001127226:c.*4692T>C;NM_001127225:c.*4692T>C;NM_001127223:c.*4692T>C . . "Hemolytic anemia, CD59-mediated, with or without immune-mediated polyneuropathy, Autosomal recessive" 11p13 . . . . . . . . rs7046 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 35229771 35229771 C T UTR3 CD44 NM_001202556:c.*438C>T;NM_001202555:c.*438C>T;NM_000610:c.*438C>T;NM_001001391:c.*438C>T;NM_001001390:c.*438C>T;NM_001001392:c.*484C>T;NM_001001389:c.*438C>T . . . 11p13 . . . . . . . . rs8193 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 46321333 46321333 T C UTR3 CREB3L1 NM_052854:c.*587T>C . . . 11p11.2 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 57551866 57551866 T C UTR3 UBE2L6 NM_198183:c.*492A>G;NM_004223:c.*492A>G . . . 11q12.1 . . . . . . . . rs5847 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 62672097 62672097 G A exonic UQCC3 . nonsynonymous SNV UQCC3:NM_001085372:exon2:c.G265A:p.G89S . 11q12.3 0.7586 0.6376 0.8123 0.9284 0.8122 0.7269 0.7917 0.8025 rs13941 0.27 T 0.078 B 0.013 B . . 1 P . . . . 0.21 N 0.029 1.976 16.06 0.824 0.039 N -1.026 T 0 T 0.442 0 -3.42 0.589 -0.253 0.319 0 8.551 0.700608 0.597938 0.716033 0.732353 0.55 0.724138 0.692547 0.742424 chr11 64321744 64321744 C G UTR3 PRDX5 NM_001358511:c.*53C>G;NM_012094:c.*53C>G;NM_181651:c.*53C>G;NM_181652:c.*53C>G;NM_001358516:c.*53C>G . . . 11q13.1 . . . . . . . . rs1047206 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 65440647 65440647 A G ncRNA_exonic NEAT1 . . . . 11q13.1 . . . . . . . . rs508286 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 65502528 65502528 T C ncRNA_exonic MALAT1;TALAM1 . . . . 11q13.1 0.0012 0.0002 0.0028 0.0103 0 9.90E-05 0 0.0005 rs80314015 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 65504361 65504361 C T ncRNA_exonic MALAT1;TALAM1 . . . . 11q13.1 0.1659 0.1354 0.13 0.1617 0.0956 0.1972 0.1823 0.1186 rs3200401 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 66337522 66337522 C T UTR3 BRMS1 NM_015399:c.*360G>A;NM_001024957:c.*146G>A . . . 11q13.2 . . . . . . . . rs3116068 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 68036292 68036292 C T exonic NDUFS8 . nonsynonymous SNV NDUFS8:NM_002496:exon6:c.C412T:p.R138C "Leigh syndrome due to mitochondrial complex I deficiency, Autosomal recessive, Mitochondrial" 11q13.2 . . . . . . . . . 0 D 1 D 1 D 0 D 1 D 2.64 M -2.91 D -7.64 D 0.817 7.005 33 0.999 0.888 D 0.954 D 0.874 D 0.672 0 4.68 0.868 0.847 0.998 0.996 16.358 . . . . . . . . chr11 68691002 68691002 T C UTR3 GAL NM_015973:c.*15T>C . . . 11q13.2 0.6745 0.4262 0.7249 0.7777 0.8791 0.679 0.6696 0.6413 rs1042577 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 69299394 69299394 A G intergenic MYEOV;LOC102724265 dist=2107;dist=126261 . . . 11q13.3 . . . . . . . . rs10896458 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 70436523 70436523 A C UTR3 CTTN NM_138565:c.*1361A>C;NM_001184740:c.*115A>C;NM_005231:c.*1361A>C . . . 11q13.3 . . . . . . . . rs6894 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 72003032 72003032 T C UTR3 NUMA1 NM_006185:c.*495A>G;NM_001286561:c.*495A>G . . "Leukemia, acute promyelocytic, somatic" 11q13.4 . . . . . . . . rs1541304 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 88326130 88326130 A T UTR3 CTSC NM_001114173:c.*247T>A;NM_148170:c.*303T>A . . "Haim-Munk syndrome, Autosomal recessive;Papillon-Lefevre syndrome, Autosomal recessive;Periodontitis 1, juvenile, Autosomal recessive" 11q14.2 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 118602670 118602670 T C UTR3 ARCN1 NM_001142281:c.*1956T>C;NM_001655:c.*1956T>C . . "Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay, Autosomal dominant" 11q23.3 . . . . . . . . rs17742 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr11 123073094 123073094 T C UTR3 CLMP NM_024769:c.*380A>G . . "Congenital short bowel syndrome, Autosomal recessive" 11q24.1 . . . . . . . . rs11218951 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 8647977 8647977 A G UTR3 MFAP5 NM_001297710:c.*114T>C;NM_001297709:c.*114T>C;NM_003480:c.*114T>C;NM_001297712:c.*114T>C;NM_001297711:c.*114T>C . . "Aortic aneurysm, familial thoracic 9, Autosomal dominant" 12p13.31 . . . . . . . . rs148739395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 11172151 11172151 G A UTR3 SMIM10L1 NM_001271592:c.*588G>A . . . 12p13.2 . . . . . . . . rs8300 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 13197731 13197731 C T intronic EMP1 . . . . 12p13.1 . . . . . . . . rs11055276 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 16348617 16348617 A G intronic MGST1 . . . . 12p12.3 . . . . . . . . rs2975138 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 16364098 16364098 T G UTR3 MGST1 NM_145792:c.*57T>G;NM_001260511:c.*57T>G;NM_001260512:c.*348T>G;NM_020300:c.*57T>G;NM_145791:c.*57T>G;NM_145764:c.*57T>G . . . 12p12.3 . . . . . . . . rs1042669 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 24811449 24811449 T C UTR3 BCAT1 NM_001178093:c.*6559A>G;NM_001178092:c.*6559A>G;NM_005504:c.*6559A>G;NM_001178094:c.*6559A>G;NM_001178091:c.*6559A>G . . . 12p12.1 . . . . . . . . rs1043881 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 24811589 24811589 C T UTR3 BCAT1 NM_001178093:c.*6419G>A;NM_001178092:c.*6419G>A;NM_005504:c.*6419G>A;NM_001178094:c.*6419G>A;NM_001178091:c.*6419G>A . . . 12p12.1 . . . . . . . . rs1043851 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 47968629 47968629 G C UTR3 TMEM106C NM_001143841:c.*400G>C;NM_001143843:c.*400G>C;NM_024056:c.*400G>C;NM_001143842:c.*400G>C . . . 12q13.11 . . . . . . . . rs6823 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 52077375 52077375 C T UTR3 ATG101 NM_021934:c.*185C>T;NM_001098673:c.*185C>T . . . 12q13.13 . . . . . . . . rs11521 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 52248734 52248734 G A exonic KRT7 . nonsynonymous SNV KRT7:NM_005556:exon9:c.G1384A:p.A462T . 12q13.13 0.013 0.0001 0.0007 0.0952 0 7.87E-05 0.0085 0.0496 rs74761279 1 T 0.001 B 0 B . . 1 N 0.06 N -1.58 D 0.3 N 0.115 0.753 9.173 0.788 0.029 N -1.097 T 0.009 T 0.706 0 -1.63 -0.77 -0.751 0.001 0 4.163 0.006067 0.005051 0 0.002959 0 0 0.006173 0.026515 chr12 55757507 55757507 T C UTR3 SARNP NM_033082:c.*5A>G . . . 12q13.2 0.2727 0.0519 0.3392 0.3163 0.3464 0.2947 0.2511 0.2241 rs7068 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 91103708 91103708 A G UTR3 LUM NM_002345:c.*457T>C . . . 12q21.33 . . . . . . . . rs80228231 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 103934201 103934201 C T exonic HSP90B1 . synonymous SNV HSP90B1:NM_003299:exon5:c.C657T:p.T219T . 12q23.3 0.1346 0.0224 0.2722 0.26 0.1071 0.1248 0.1093 0.0954 rs6615 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.057402 0.050505 0.033967 0.049708 0.1 0.068966 0.097561 0.060606 chr12 118145427 118145427 T C UTR3 PEBP1 NM_002567:c.*624T>C . . . 12q24.23 . . . . . . . . rs1051470 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr12 120210685 120210685 G A ncRNA_intronic PXN-AS1 . . . . 12q24.23 . . . . . . . . rs149828972 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 21177418 21177418 T C UTR3 MRPL57 NM_024026:c.*193T>C . . . 13q12.11 . . . . . . . . rs11553933 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 27623299 27623299 C T UTR3 POLR1D NM_015972:c.*49C>T . . "Treacher Collins syndrome 2, Autosomal dominant" 13q12.2 0.397 0.0986 0.5976 0.4702 0.4058 0.3951 0.3666 0.3886 rs7097 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 27666140 27666140 G A UTR3 POLR1D NM_001206559:c.*187G>A;NM_152705:c.*187G>A . . "Treacher Collins syndrome 2, Autosomal dominant" 13q12.2 . . . . . . . . rs17085862 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 43107291 43107291 G A UTR3 DNAJC15 NM_013238:c.*43G>A . . . 13q14.11 0.5199 0.5622 0.5683 0.4755 0.539 0.5137 0.4586 0.5022 rs1047775 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 110512918 110512918 G C UTR3 COL4A2 NM_001846:c.*727G>C . . "Porencephaly 2, Autosomal dominant" 13q34 . . . . . . . . rs15457 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr13 110641568 110641568 T G exonic CARS2 . nonsynonymous SNV "CARS2:NM_024537:exon15:c.A1664C:p.Q555P,CARS2:NM_001352252:exon16:c.A878C:p.Q293P" "Combined oxidative phosphorylation deficiency 27, Autosomal recessive" 13q34 0.112 0.0614 0.0873 0.1068 0.1589 0.1323 0.13 0.062 rs1043886 0.463 T 0 B 0 B 0.239 N 1 P 0 N 1.52 T -0.63 N 0.064 0.512 7.522 0.812 0.188 N -1.007 T 0 T 0.672 0 -0.906 -0.664 -0.079 0.263 0.765 7.776 0.126385 0.136364 0.154891 0.067251 0.1 0.103448 0.143293 0.090909 chr14 22564938 22564938 G A UTR3 DAD1 NM_001344:c.*244C>T . . . 14q11.2 . . . . . . . . rs1051189 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 22575102 22575102 T G UTR3 DAD1 NM_001344:c.*1A>C . . . 14q11.2 . . . . . . . . rs386775535 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 34568651 34568651 A C intronic SNX6 . . . . 14q13.1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 35050161 35050161 C T intronic FAM177A1 . . . . 14q13.2 . . . . . . . . rs76767804 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 60144930 60144930 C T UTR3 DHRS7;PCNX4 NM_001322281:c.*36G>A;NM_001322282:c.*36G>A;NM_016029:c.*36G>A;NM_001322280:c.*36G>A;NM_001330177:c.*10709C>T . . . 14q23.1 0.2306 0.5252 0.1177 0.3118 0.1088 0.1655 0.2208 0.3949 rs399535 . . . . . . 0.154 N 1 P . . . . . . 0.132 0.753 9.167 0.858 0.01 N -0.92 T 0 T 0.732 0 1.68 -0.301 0.789 0.018 0.162 6.433 . . . . . . . . chr14 60144957 60144957 G A UTR3 DHRS7;PCNX4 NM_001322281:c.*9C>T;NM_001322282:c.*9C>T;NM_016029:c.*9C>T;NM_001322280:c.*9C>T;NM_001330177:c.*10736G>A . . . 14q23.1 0.2308 0.5257 0.1175 0.3121 0.1092 0.1657 0.2203 0.3947 rs381839 . . . . . . 0.365 N 1 P . . . . . . 0.12 0.114 3.754 0.946 0.044 N -0.956 T 0 T 0.732 0 0.036 0.63 0.135 0.001 0.001 8.332 . . . . . . . . chr14 61721103 61721103 C T ncRNA_intronic HIF1A-AS3 . . . . 14q23.2 . . . . . . . . rs10148514 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 74942064 74942064 G T UTR3 PGF NM_001207012:c.*642C>A;NM_002632:c.*642C>A;NM_001293643:c.*642C>A . . . 14q24.3 . . . . . . . . rs1042886 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 74942086 74942086 T C UTR3 PGF NM_001207012:c.*620A>G;NM_002632:c.*620A>G;NM_001293643:c.*620A>G . . . 14q24.3 . . . . . . . . rs8185 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 75470319 75470319 G A UTR3 JDP2 NM_001135047:c.*844G>A;NM_001135048:c.*844G>A;NM_130469:c.*844G>A;NM_001135049:c.*844G>A . . . 14q24.3 . . . . . . . . rs10057 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 77708130 77708130 A C exonic SLIRP . synonymous SNV "SLIRP:NM_001267863:exon1:c.A19C:p.R7R,SLIRP:NM_001267864:exon1:c.A19C:p.R7R,SLIRP:NM_031210:exon1:c.A19C:p.R7R" . 14q24.3 0.9226 0.8411 0.913 0.8221 0.9422 0.9633 0.9273 0.8607 rs11159286 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 104937340 104937340 A G UTR3 AHNAK2;PLD4 NM_138420:c.*723T>C;NM_001350929:c.*723T>C;NM_001308174:c.*4376A>G;NM_138790:c.*4376A>G . . . 14q32.33 . . . . . . . . rs117884483 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr14 105250942 105250942 T C UTR3 BTBD6 NM_033271:c.*270T>C . . . 14q32.33 . . . . . . . . rs4677 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 40036374 40036374 G C exonic SRP14 . nonsynonymous SNV "SRP14:NM_003134:exon5:c.C370G:p.P124A,SRP14:NM_001309434:exon6:c.C226G:p.P76A" . 15q15.1 0.9044 0.8602 0.9631 0.7634 0.9026 0.9213 0.9102 0.8969 rs7535 1 T 0 B 0 B . . 1 P 0 N 2.81 T -0.19 N 0.094 -0.902 0.026 0.342 0.003 N -0.985 T 0 T 0.722 0 0.235 -2.063 -0.578 0.082 0.003 . 0.90282 0.939394 0.902174 0.874269 0.9 0.905172 0.902439 0.935606 chr15 43801729 43801729 T C exonic HYPK . nonsynonymous SNV HYPK:NM_016400:exon4:c.T313C:p.S105P . 15q15.3 0.134 0.2682 0.1941 0.2775 0.0375 0.0971 0.1211 0.121 rs12702 0.119 T 0.001 B 0.006 B 0 D 0 P 0.415 N 0.68 T -2.62 D 0.248 3.554 23.1 0.994 0.914 D -1.033 T 0 T 0.628 0 5.34 0.991 1.061 0.999 1 9.901 0.134441 0.156566 0.17663 0.087719 0.15 0.094828 0.115854 0.083333 chr15 44717814 44717814 G C UTR3 B2M NM_004048:c.*222G>C . . "Immunodeficiency 43, Autosomal recessive" 15q21.1 . . . . . . . . rs7151 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 49484856 49484856 C T UTR3 FGF7 NM_002009:c.*352C>T . . . 15q21.2 . . . . . . . . rs35686890 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 59638932 59638932 A G UTR3 GTF2A2 NM_001320929:c.*200T>C;NM_004492:c.*200T>C;NM_001320930:c.*200T>C . . . 15q22.2 . . . . . . . . rs4232 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 60362840 60362840 T C intronic ANXA2 . . . . 15q22.2 . . . . . . . . rs12441980 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 73714350 73714350 T C UTR3 CD276 NM_025240:c.*1394T>C;NM_001329629:c.*1394T>C;NM_001024736:c.*1394T>C;NM_001329628:c.*1394T>C . . . 15q24.1 . . . . . . . . rs1044581 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 74409394 74409394 G T UTR3 SEMA7A NM_001146030:c.*1230C>A;NM_003612:c.*1230C>A;NM_001146029:c.*1230C>A . . . 15q24.1 . . . . . . . . rs113822312 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 80803287 80803287 C T intronic CEMIP . . . . 15q25.1 . . . . . . . . rs17227638 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 80808537 80808537 G A intronic CEMIP . . . . 15q25.1 . . . . . . . . rs2759307 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 80890253 80890253 T C intronic CEMIP . . . . 15q25.1 . . . . . . . . rs12900140 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr15 88874007 88874007 A G exonic ACAN . nonsynonymous SNV "ACAN:NM_013227:exon17:c.A7499G:p.Q2500R,ACAN:NM_001369268:exon18:c.A7613G:p.Q2538R" "Osteochondritis dissecans, short stature, and early-onset osteoarthritis, Autosomal dominant;Spondyloepimetaphyseal dysplasia, aggrecan type;Spondyloepiphyseal dysplasia, Kimberley type, Autosomal dominant" 15q26.1 0.2928 0.6984 0.2832 0.2512 0.1853 0.2369 0.2765 0.3478 rs1126823 1 T 0.001 B 0.001 B 0.011 N 1 P . . -0.14 T 2.11 N 0.252 1.071 11.06 0.691 0.19 N -0.938 T 0 T 0.487 0 2.92 -0.362 0.138 0.929 0.996 11.127 0.336568 0.352632 0.355978 0.302941 0.35 0.353448 0.351266 0.344961 chr16 717430 717430 C G UTR3 METRN NM_024042:c.*43C>G . . . 16p13.3 0.5081 0.6968 0.5924 0.6717 0.3878 0.394 0.3 0.6503 rs10682 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 1789022 1789022 G A UTR3 NUBP2 NM_001284501:c.*308G>A;NM_012225:c.*308G>A;NM_001284502:c.*9G>A . . . 16p13.3 . . . . . . . . rs1065663 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 2209190 2209190 T C UTR3 MLST8 NM_001199173:c.*313T>C;NM_001199174:c.*313T>C;NM_001199175:c.*313T>C;NM_001352057:c.*313T>C;NM_001352059:c.*313T>C;NM_022372:c.*313T>C;NM_001352060:c.*313T>C . . . 16p13.3 . . . . . . . . rs3160 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 2899247 2899247 T C UTR3 FLYWCH2 NM_001142500:c.*98T>C;NM_001142499:c.*98T>C;NM_138439:c.*98T>C . . . 16p13.3 . . . . . . . . rs7281 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 8855117 8855117 T C ncRNA_exonic LOC100130283 . . . . 16p13.2 0.9216 0.8443 0.7388 0.9709 0.9672 0.9508 0.9412 0.9426 rs6898 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 15038117 15038117 G T exonic NTAN1 . nonsynonymous SNV "NTAN1:NM_001270767:exon8:c.C532A:p.H178N,NTAN1:NM_001270766:exon9:c.C532A:p.H178N,NTAN1:NM_173474:exon10:c.C847A:p.H283N" . 16p13.11 0.3409 0.2191 0.557 0.4073 0.3325 0.3029 0.3447 0.3878 rs1136001 0.499 T 0 B 0 B 0.009 N 1 P -0.805 N 1.65 T 0.37 N 0.018 -0.261 0.81 0.683 0.037 N -0.912 T 0 T 0.707 0 1.84 0.086 -0.242 0.052 0.004 6.911 0.305136 0.353535 0.285326 0.289474 0.15 0.275862 0.27439 0.325758 chr16 23690137 23690137 G A UTR3 PLK1 NM_005030:c.*74G>A . . . 16p12.2 0.0528 0.1398 0.127 0.0693 0.0307 0.0246 0.0426 0.0627 rs2230915 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 23690217 23690217 A G UTR3 PLK1 NM_005030:c.*154A>G . . . 16p12.2 0.3153 0.1986 0.2495 0.5042 0.3784 0.2949 0.2949 0.363 rs27770 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 55505965 55505965 T C UTR3 MMP2 NM_001302508:c.*523T>C;NM_004530:c.*523T>C;NM_001302510:c.*523T>C;NM_001302509:c.*523T>C;NM_001127891:c.*523T>C . . "Multicentric osteolysis, nodulosis, and arthropathy, Autosomal recessive" 16q12.2 . . . . . . . . rs141779983 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 75229126 75229126 T A UTR3 BCAR1 NM_001170714:c.*385A>T;NM_001170717:c.*385A>T;NM_001170719:c.*385A>T;NM_001170718:c.*385A>T;NM_001170716:c.*385A>T;NM_001170715:c.*385A>T;NM_014567:c.*385A>T;NM_001170720:c.*385A>T;NM_001170721:c.*385A>T . . . 16q23.1 . . . . . . . . rs5842 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 80976002 80976002 T C UTR3 CMC2 NM_001351968:c.*91A>G;NM_001351970:c.*91A>G;NM_020188:c.*91A>G;NM_001351973:c.*91A>G;NM_001351967:c.*91A>G . . . 16q23.2 . . . . . . . . rs2303214 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 84565616 84565616 A T UTR3 COTL1 NM_021149:c.*1229T>A . . . 16q24.1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 84565924 84565924 A G UTR3 COTL1 NM_021149:c.*921T>C . . . 16q24.1 . . . . . . . . rs7458 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 88643329 88643329 C T UTR3 CYBA NM_000101:c.*24G>A . . "Chronic granulomatous disease, autosomal, due to deficiency of CYBA, Autosomal recessive" 16q24.2 0.5601 0.5109 0.6316 0.432 0.6111 0.5942 0.6786 0.5476 rs1049255 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr16 88643420 88643420 A G exonic CYBA . nonsynonymous SNV CYBA:NM_000101:exon6:c.T521C:p.V174A "Chronic granulomatous disease, autosomal, due to deficiency of CYBA, Autosomal recessive" 16q24.2 0.6892 0.8316 0.6919 0.75 0.75 0.667 0.8154 0.6869 rs1049254 1 T 0 B 0 B . . 1 P -0.69 N -1.74 D 0.22 N 0.061 -2.391 0.001 0.317 0.004 N -0.991 T 0 T 0.635 0 -7.87 -0.362 -1.659 0 0 0.86 0.698347 0.675 0.758065 0.640411 0.7 0.705882 0.698473 0.671053 chr16 89561263 89561263 C T exonic RPL13 . synonymous SNV "RPL13:NM_033251:exon2:c.C141T:p.A47A,RPL13:NM_000977:exon3:c.C141T:p.A47A,RPL13:NM_001243131:exon3:c.C141T:p.A47A" . 16q24.3 0.2621 0.2805 0.2583 0.2735 0.2256 0.3425 0.2816 0.1714 rs174035 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.178096 0.205263 0.182451 0.139053 0.3 0.105263 0.232704 0.160305 chr16 89563411 89563411 G A UTR3 RPL13 NM_000977:c.*369G>A;NM_001243131:c.*369G>A;NM_033251:c.*369G>A . . . 16q24.3 . . . . . . . . rs3211569 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 1345098 1345098 A G UTR3 YWHAE NM_006761:c.*349T>C . . . 17p13.3 . . . . . . . . rs9393 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 1400164 1400164 C G UTR5 YWHAE NM_006761:c.-54G>C . . . 17p13.3 . . . . . . . . rs150032319 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 2043209 2043209 C G UTR3 DPH1;OVCA2 NM_001346574:c.*623C>G;NM_001346575:c.*623C>G;NM_001346576:c.*623C>G;NM_001383:c.*623C>G;NM_080822:c.*105C>G . . . 17p13.3 . . . . . . . . rs1051322 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 3662915 3662915 G C ncRNA_exonic P2RX5-TAX1BP3 . . . . 17p13.2 . . . . . . . . rs1128109 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 3662919 3662919 G A ncRNA_exonic P2RX5-TAX1BP3 . . . . 17p13.2 . . . . . . . . rs1128098 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 3662938 3662938 C T ncRNA_exonic P2RX5-TAX1BP3 . . . . 17p13.2 . . . . . . . . rs7093 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 4798107 4798107 C T exonic PSMB6 . synonymous SNV "PSMB6:NM_001270481:exon5:c.C531T:p.Y177Y,PSMB6:NM_002798:exon5:c.C531T:p.Y177Y" . 17p13.2 0.0412 0.0528 0.0181 0.0971 0.0445 0.0326 0.0485 0.0536 rs7468 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.051863 0.121212 0.059783 0.040936 0 0.025862 0.015244 0.030303 chr17 5432890 5432890 T C UTR3 C1QBP;RPAIN NM_001212:c.*125A>G;NM_001160246:c.*341T>C;NM_001160266:c.*327T>C;NM_001160244:c.*319T>C;NM_001033002:c.*319T>C . . . 17p13.2 . . . . . . . . rs1050461 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 7243966 7243966 G C UTR3 CTDNEP1 NM_015343:c.*219C>G;NM_001143775:c.*219C>G . . . 17p13.1 . . . . . . . . rs551507969 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 7578807 7578807 A G ncRNA_exonic SENP3-EIF4A1 . . . . 17p13.1 . . . . . . . . rs3809719 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 7857079 7857079 G A exonic NAA38 . synonymous SNV "NAA38:NM_032356:exon1:c.C345T:p.F115F,NAA38:NM_001320924:exon2:c.C201T:p.F67F,NAA38:NM_001320925:exon2:c.C201T:p.F67F,NAA38:NM_001330111:exon4:c.C123T:p.F41F" . 17p13.1 0.174 0.2965 0.332 0.2376 0.1018 0.1129 0.1503 0.2276 rs4724 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.154582 0.247475 0.163043 0.116959 0.05 0.12931 0.128049 0.143939 chr17 41867214 41867214 A C UTR3 ACLY NM_001303274:c.*596T>G;NM_001303275:c.*596T>G;NM_001096:c.*596T>G;NM_198830:c.*596T>G . . . 17q21.2 . . . . . . . . rs7713 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 47313585 47313585 G C ncRNA_intronic THCAT158 . . . . 17q21.32 . . . . . . . . rs12600603 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 48026394 48026394 A G UTR3 COPZ2 NM_016429:c.*34T>C . . . 17q21.32 0.3464 0.2714 0.1809 0.2195 0.4802 0.3959 0.385 0.3148 rs12051 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 68532637 68532637 C G UTR3 PRKAR1A NM_001278433:c.*2188C>G;NM_212471:c.*2188C>G;NM_001369389:c.*2188C>G;NM_001276289:c.*2188C>G;NM_002734:c.*2188C>G;NM_212472:c.*2188C>G;NM_001369390:c.*2188C>G . . "Acrodysostosis 1, with or without hormone resistance, Autosomal dominant;Adrenocortical tumor, somatic (3);Carney complex, type 1, Autosomal dominant;Myxoma, intracardiac, Autosomal dominant;Pigmented nodular adrenocortical disease, primary, 1, Autosomal dominant" 17q24.2 . . . . . . . . rs6958 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 75130365 75130365 A G UTR3 NT5C NM_001252377:c.*123T>C;NM_014595:c.*123T>C . . . 17q25.1 . . . . . . . . rs3752801 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 76565237 76565237 G A ncRNA_exonic SNHG16 . . . . 17q25.1 . . . . . . . . rs7353 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 77500378 77500378 T C UTR3 SEPTIN9 NM_001293695:c.*1720T>C;NM_001113491:c.*1720T>C;NM_001113492:c.*1720T>C;NM_006640:c.*1720T>C;NM_001113493:c.*1720T>C;NM_001113494:c.*1720T>C;NM_001293696:c.*1720T>C;NM_001113496:c.*1720T>C;NM_001293697:c.*1720T>C;NM_001293698:c.*1720T>C;NM_001113495:c.*1720T>C . . . 17q25.3 . . . . . . . . rs445507 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 81707345 81707345 C T UTR3 MRPL12 NM_002949:c.*105C>T . . . 17q25.3 . . . . . . . . rs10560 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr17 83094678 83094678 A G UTR3 METRNL NM_001004431:c.*103A>G;NM_001363853:c.*103A>G . . . 17q25.3 . . . . . . . . rs8269 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr18 2913920 2913920 G A UTR3 EMILIN2 NM_032048:c.*516G>A . . . 18p11.31 . . . . . . . . rs1059282 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr18 3256045 3256045 A G ncRNA_intronic LOC104968399 . . . . 18p11.31 . . . . . . . . rs144100939 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr18 47156119 47156119 A G UTR3 IER3IP1 NM_016097:c.*58T>C . . "Microcephaly, epilepsy, and diabetes syndrome, Autosomal recessive" 18q21.1 . . . . . . . . rs150586939 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr18 63903748 63903748 G A UTR3 SERPINB2 NM_001143818:c.*443G>A;NM_002575:c.*443G>A . . . 18q22.1 . . . . . . . . rs12102 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr18 67515155 67515155 T C UTR5 DSEL NM_032160:c.-547A>G . . . 18q22.1 . . . . . . . . rs2291172 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 683221 683221 A G UTR3 FSTL3 NM_005860:c.*1513A>G . . . 19p13.3 . . . . . . . . rs1046253 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 863220 863220 C G exonic CFD . nonsynonymous SNV "CFD:NM_001317335:exon5:c.C765G:p.I255M,CFD:NM_001928:exon5:c.C744G:p.I248M" "Complement factor D deficiency, Autosomal recessive" 19p13.3 0.0291 0.0024 0.0267 0.251 0 0.0003 0.013 0.032 rs2230216 0 D 1 D 1 D . . 0.994 D 3.58 H -1.09 T -2.63 D 0.593 4.424 24.2 0.995 0.154 N -0.785 T 0.015 T 0.652 0 1.76 -0.041 0.736 0.022 0.051 4.344 0.005118 0 0.001366 0.002959 0 0 0.003145 0.011538 chr19 1088286 1088286 T C UTR3 POLR2E NM_002695:c.*449A>G;NM_001316324:c.*449A>G;NM_001316323:c.*449A>G . . . 19p13.3 . . . . . . . . rs6843 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 1244519 1244519 G C UTR3 ATP5F1D NM_001687:c.*82G>C . . . 19p13.3 . . . . . . . . rs735524 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 1852583 1852583 A G UTR3 KLF16 NM_031918:c.*1876T>C . . . 19p13.3 . . . . . . . . rs1054972 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 2426602 2426602 G A UTR3 TIMM13 NM_012458:c.*346C>T . . . 19p13.3 . . . . . . . . rs79130882 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 2427268 2427268 G A exonic TIMM13 . synonymous SNV TIMM13:NM_012458:exon2:c.C177T:p.D59D . 19p13.3 0.0758 0.129 0.0804 0.2584 0.0348 0.0401 0.0489 0.1051 rs968688 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.041793 0.065657 0.024457 0.017544 0 0.034483 0.045732 0.07197 chr19 2732743 2732743 G A UTR3 SLC39A3 NM_144564:c.*8C>T . . . 19p13.3 0.1296 0.1588 0.1934 0.3525 0.0965 0.0813 0.0938 0.1526 rs9160 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 4360546 4360546 G A UTR3 SH3GL1 NM_001199944:c.*1054C>T;NM_001199943:c.*1054C>T;NM_003025:c.*1054C>T . . "Leukemia, acute myeloid, Autosomal dominant" 19p13.3 . . . . . . . . rs7769 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 4445159 4445159 A G UTR3 UBXN6 NM_025241:c.*339T>C;NM_001171091:c.*339T>C . . . 19p13.3 . . . . . . . . rs243387 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 5205707 5205707 C T UTR3 PTPRS NM_130855:c.*1067G>A;NM_130853:c.*1067G>A;NM_130854:c.*1067G>A;NM_002850:c.*1067G>A . . . 19p13.3 . . . . . . . . rs1129626 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 7682559 7682559 G A exonic TRAPPC5 . synonymous SNV "TRAPPC5:NM_001042461:exon2:c.G306A:p.A102A,TRAPPC5:NM_001042462:exon2:c.G306A:p.A102A,TRAPPC5:NM_174894:exon2:c.G306A:p.A102A" . 19p13.2 0.1939 0.4126 0.1041 0.1461 0.1754 0.1723 0.1871 0.2462 rs1053363 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.30746 0.328283 0.35462 0.350877 0.35 0.25 0.251534 0.257576 chr19 8311547 8311547 G A exonic NDUFA7 . synonymous SNV NDUFA7:NM_005001:exon4:c.C300T:p.P100P . 19p13.2 0.175 0.048 0.3131 0.2136 0.1996 0.1885 0.192 0.0665 rs561 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.160425 0.156566 0.164402 0.190058 0.2 0.172414 0.2 0.083969 chr19 10994932 10994932 T C exonic SMARCA4 . synonymous SNV "SMARCA4:NM_001128845:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128846:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128848:exon8:c.T1524C:p.H508H,SMARCA4:NM_001128847:exon9:c.T1524C:p.H508H,SMARCA4:NM_001128849:exon9:c.T1524C:p.H508H,SMARCA4:NM_003072:exon9:c.T1524C:p.H508H,SMARCA4:NM_001128844:exon10:c.T1524C:p.H508H" "Coffin-Siris syndrome 4, Autosomal dominant" 19p13.2 0.3353 0.3111 0.1849 0.2383 0.3618 0.3487 0.3878 0.4378 rs7935 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.368077 0.308081 0.336957 0.409357 0.25 0.327586 0.390244 0.409091 chr19 11146342 11146342 T C exonic SPC24 . nonsynonymous SNV SPC24:NM_001317031:exon5:c.A524G:p.K175R . 19p13.2 0.6 0.5 . . . 0.6667 . . rs11557092 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 11164463 11164463 A C UTR3 KANK2 NM_001329451:c.*2095T>G;NM_015493:c.*2095T>G;NM_001136191:c.*2095T>G . . "Palmoplantar keratoderma and woolly hair, Autosomal recessive" 19p13.2 . . . . . . . . rs7188 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 11450814 11450814 T C UTR3 PRKCSH NM_001289104:c.*185T>C;NM_001289103:c.*185T>C;NM_001001329:c.*185T>C;NM_002743:c.*185T>C;NM_001289102:c.*185T>C . . "Polycystic liver disease 1, Autosomal dominant" 19p13.2 . . . . . . . . rs8616 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 11553206 11553206 G A UTR3 ELOF1 NM_032377:c.*540C>T;NM_001363674:c.*540C>T;NM_001363675:c.*540C>T;NM_001363673:c.*540C>T . . . 19p13.2 . . . . . . . . rs72620552 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 13837977 13837977 G A ncRNA_exonic LOC284454 . . . . 19p13.12 . . . . . . . . rs62122063 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 14470839 14470839 G A exonic PKN1 . synonymous SNV "PKN1:NM_002741:exon21:c.G2613A:p.Q871Q,PKN1:NM_213560:exon21:c.G2631A:p.Q877Q" . 19p13.12 0.0026 0 0 0.0326 0.0002 0.0003 0.0033 0.0009 rs2230541 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 14471656 14471656 G A exonic PKN1 . nonsynonymous SNV "PKN1:NM_002741:exon22:c.G2701A:p.V901I,PKN1:NM_213560:exon22:c.G2719A:p.V907I" . 19p13.12 0.2069 0.0612 0.2743 0.8215 0.1105 0.1168 0.1722 0.204 rs10846 0.195 T 0.023 B 0.013 B 0.001 U 0.379 P 0.375 N 0.08 T -0.39 N 0.054 2.643 20.5 0.99 0.345 N -0.963 T 0 T 0.707 0 2.71 0.069 0.864 0.847 0.551 4.456 0.114646 0.07732 0.115489 0.105263 0.1 0.155172 0.141104 0.143939 chr19 15159772 15159772 G A UTR3 NOTCH3 NM_000435:c.*890C>T . . "Cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 1, Autosomal dominant;Lateral meningocele syndrome, Autosomal dominant" 19p13.12 . . . . . . . . rs1044123 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 15159854 15159854 C T UTR3 NOTCH3 NM_000435:c.*808G>A . . "Cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 1, Autosomal dominant;Lateral meningocele syndrome, Autosomal dominant" 19p13.12 . . . . . . . . rs1044116 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 16646735 16646735 T C UTR3 SMIM7 NM_024104:c.*511A>G . . . 19p13.11 . . . . . . . . rs2279448 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18177986 18177986 C T UTR3 IFI30 NM_006332:c.*75C>T . . . 19p13.11 . . . . . . . . rs77198486 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18178000 18178000 A G UTR3 IFI30 NM_006332:c.*89A>G . . . 19p13.11 . . . . . . . . rs2921 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18388970 18388970 A G UTR3 GDF15 NM_004864:c.*35A>G . . . 19p13.11 0.8187 0.8744 0.8349 0.8369 0.8766 0.8134 0.8192 0.743 rs1227733 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18389005 18389005 G C UTR3 GDF15 NM_004864:c.*70G>C . . . 19p13.11 . . . . . . . . rs1054564 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18389048 18389048 T C UTR3 GDF15 NM_004864:c.*113T>C . . . 19p13.11 . . . . . . . . rs1054221 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 18928489 18928489 T C UTR3 DDX49 NM_019070:c.*173T>C . . . 19p13.11 . . . . . . . . rs7497 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 32585823 32585823 C T exonic PDCD5 . synonymous SNV PDCD5:NM_004708:exon4:c.C174T:p.N58N . 19q13.11 0.0098 0.0009 0.0007 0.0809 0.0098 0.0023 0.0077 0.0146 rs61756021 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.004028 0.005051 0.005435 0.002924 0 0 0 0.003788 chr19 32587379 32587379 T C UTR3 PDCD5 NM_004708:c.*79T>C . . . 19q13.11 . . . . . . . . rs139546685 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 33387133 33387133 A G UTR3 PEPD NM_000285:c.*211T>C;NM_001166057:c.*211T>C;NM_001166056:c.*211T>C . . "Prolidase deficiency, Autosomal recessive" 19q13.11 . . . . . . . . rs3556 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 35120405 35120405 T G intronic FXYD3 . . . . 19q13.12 . . . . . . . . rs2637839 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 35547488 35547488 A G UTR3 TMEM147 NM_001242597:c.*41A>G;NM_001242598:c.*41A>G;NM_032635:c.*41A>G . . . 19q13.12 0.6446 0.569 0.6633 0.7583 0.6928 0.6173 0.6236 0.709 rs7599 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 38878729 38878729 T G UTR3 SIRT2 NM_001193286:c.*628A>C;NM_030593:c.*426A>C;NM_012237:c.*426A>C . . . 19q13.2 . . . . . . . . rs2015 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 47275600 47275600 C G UTR3 INAFM1 NM_178511:c.*252C>G . . . 19q13.32 . . . . . . . . rs6612 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 48382661 48382661 C T UTR3 KDELR1 NM_006801:c.*632G>A . . . 19q13.33 . . . . . . . . rs1050671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 48875910 48875910 C T exonic PPP1R15A . synonymous SNV PPP1R15A:NM_014330:exon3:c.C1962T:p.A654A . 19q13.33 0.2995 0.5355 0.2477 0.1815 0.3031 0.2785 0.3259 0.3313 rs524 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.360524 0.429293 0.389946 0.374269 0.3 0.336207 0.289634 0.340909 chr19 48875925 48875925 G C exonic PPP1R15A . synonymous SNV PPP1R15A:NM_014330:exon3:c.G1977C:p.S659S . 19q13.33 0.3003 0.5361 0.248 0.1821 0.3031 0.279 0.3292 0.3344 rs527 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.361027 0.434343 0.389946 0.377193 0.3 0.336207 0.289634 0.337121 chr19 48965830 48965830 T C exonic FTL . synonymous SNV FTL:NM_000146:exon2:c.T163C:p.L55L "Hyperferritinemia-cataract syndrome, Autosomal dominant;L-ferritin deficiency, dominant and recessive, Autosomal recessive, Autosomal dominant;Neurodegeneration with brain iron accumulation 3, Autosomal dominant" 19q13.33 0.4979 0.4804 0.5255 0.4258 0.4455 0.5372 0.4934 0.3898 rs2230267 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0.553877 0.621212 0.574728 0.540936 0.45 0.5 0.573171 0.515152 chr19 49933723 49933723 G A UTR3 ATF5 NM_012068:c.*631G>A;NM_001193646:c.*631G>A;NM_001290746:c.*631G>A . . . 19q13.33 . . . . . . . . rs8647 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 50797800 50797800 T C UTR3 C19orf48 NM_001290152:c.*295A>G;NM_001290151:c.*295A>G;NM_001290150:c.*295A>G;NM_001290149:c.*295A>G;NM_001290154:c.*295A>G;NM_001290155:c.*295A>G;NM_001290153:c.*295A>G;NM_199250:c.*295A>G;NM_199249:c.*295A>G;NM_032712:c.*295A>G . . . 19q13.33 . . . . . . . . rs62114347 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr19 50797973 50797973 G A UTR3 C19orf48 NM_001290152:c.*122C>T;NM_001290151:c.*122C>T;NM_001290150:c.*122C>T;NM_001290149:c.*122C>T;NM_001290154:c.*122C>T;NM_001290155:c.*122C>T;NM_001290153:c.*122C>T;NM_199250:c.*122C>T;NM_199249:c.*122C>T;NM_032712:c.*122C>T . . . 19q13.33 . . . . . . . . rs9991 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 3048065 3048065 G A UTR3 MRPS26 NM_030811:c.*196G>A . . . 20p13 . . . . . . . . rs1100 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 3753739 3753739 T C UTR3 C20orf27 NM_001039140:c.*319A>G;NM_001258429:c.*319A>G;NM_001258430:c.*319A>G . . . 20p13 . . . . . . . . rs9171 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 3806034 3806034 T C UTR3 CDC25B NM_001287518:c.*1073T>C;NM_001287517:c.*1073T>C;NM_001287516:c.*1073T>C;NM_021872:c.*1073T>C;NM_001287519:c.*1073T>C;NM_001287520:c.*1073T>C;NM_021873:c.*1073T>C;NM_001287522:c.*1073T>C;NM_004358:c.*1073T>C;NM_001287524:c.*1073T>C . . . 20p13 . . . . . . . . rs3516 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 10413820 10413820 T C UTR5 MKKS NM_170784:c.-306A>G;NM_018848:c.-306A>G . . "Bardet-Biedl syndrome 6, Autosomal recessive;McKusick-Kaufman syndrome, Autosomal recessive" 20p12.2 . . . . . . . . rs3748466 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 17608160 17608160 T C UTR3 DSTN NM_006870:c.*1014T>C;NM_001011546:c.*1014T>C . . . 20p12.1 . . . . . . . . rs1051234 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 36545376 36545376 A G ncRNA_intronic DLGAP4-AS1 . . . . 20q11.23 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 44618834 44618834 T G UTR3 PKIG NM_001281444:c.*470T>G;NM_181804:c.*470T>G;NM_181805:c.*470T>G;NM_007066:c.*470T>G;NM_001281445:c.*470T>G . . . 20q13.12 . . . . . . . . rs76116712 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 44942370 44942370 T G UTR3 TOMM34 NM_006809:c.*739A>C . . . 20q13.12 . . . . . . . . rs12536 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 45325418 45325418 G C UTR3 SDC4 NM_002999:c.*1846C>G . . . 20q13.12 . . . . . . . . rs7138 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 56386407 56386407 T C exonic AURKA . nonsynonymous SNV "AURKA:NM_003600:exon3:c.A169G:p.I57V,AURKA:NM_198435:exon3:c.A169G:p.I57V,AURKA:NM_198437:exon3:c.A169G:p.I57V,AURKA:NM_001323303:exon4:c.A169G:p.I57V,AURKA:NM_001323304:exon4:c.A169G:p.I57V,AURKA:NM_198434:exon4:c.A169G:p.I57V,AURKA:NM_198436:exon4:c.A169G:p.I57V,AURKA:NM_001323305:exon5:c.A169G:p.I57V,AURKA:NM_198433:exon5:c.A169G:p.I57V" . 20q13.2 0.8482 0.8394 0.9225 0.8776 0.8069 0.8341 0.8194 0.8613 rs1047972 1 T 0 B 0.001 B 0.023 N 1 P . . 2.95 T 0.29 N 0.172 -2.027 0.001 0.209 0.013 N -0.937 T 0 T 0.707 0 1.97 0.002 -0.915 0.131 0.069 6.629 0.858006 0.888889 0.868207 0.880117 0.9 0.810345 0.820122 0.837121 chr20 58995401 58995401 C T UTR3 CTSZ NM_001336:c.*248G>A . . . 20q13.32 . . . . . . . . rs10369 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr20 63891395 63891395 G A UTR3 TPD52L2 NM_001243894:c.*1450G>A;NM_001243895:c.*1353G>A;NM_199359:c.*1450G>A;NM_199363:c.*1450G>A;NM_199362:c.*1450G>A;NM_199361:c.*1450G>A;NM_001243891:c.*1450G>A;NM_001243892:c.*1450G>A;NM_003288:c.*1450G>A;NM_199360:c.*1450G>A . . . 20q13.33 . . . . . . . . rs753913949 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 34142817 34142817 G A UTR3 MRPS6 NM_032476:c.*217G>A . . . 21q22.11 . . . . . . . . rs7115 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 36146408 36146408 G A exonic CBR3 . nonsynonymous SNV CBR3:NM_001236:exon3:c.G730A:p.V244M . 21q22.12 0.3742 0.474 0.2736 0.4181 0.3196 0.3481 0.3783 0.4858 rs1056892 0.069 T 0.622 P 0.141 B 0.001 D 0.898 P 2.185 M 2.87 T -0.63 N 0.063 2.426 18.99 0.987 0.894 D -0.904 T 0 T 0.707 0 0.552 -0.044 0.953 0.306 0.982 11.334 0.425982 0.409091 0.419837 0.526316 0.55 0.491379 0.35061 0.412879 chr21 44849795 44849795 A C UTR3 PTTG1IP NM_001286822:c.*1572T>G;NM_004339:c.*1786T>G . . . 21q22.3 . . . . . . . . rs1054220 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 46099112 46099112 G T intronic COL6A2 . . . "Bethlem myopathy 1, Autosomal recessive, Autosomal dominant;Ullrich congenital muscular dystrophy 1, Autosomal recessive, Autosomal dominant" 21q22.3 . . . . . . . . rs9978055 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 46129596 46129596 G C UTR3 COL6A2 NM_058174:c.*105G>C;NM_058175:c.*668G>C . . "Bethlem myopathy 1, Autosomal recessive, Autosomal dominant;Ullrich congenital muscular dystrophy 1, Autosomal recessive, Autosomal dominant" 21q22.3 . . . . . . . . rs7717 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 46129655 46129655 T C UTR3 COL6A2 NM_058174:c.*164T>C;NM_058175:c.*727T>C . . "Bethlem myopathy 1, Autosomal recessive, Autosomal dominant;Ullrich congenital muscular dystrophy 1, Autosomal recessive, Autosomal dominant" 21q22.3 . . . . . . . . rs559 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr21 46132472 46132472 G A exonic COL6A2 . nonsynonymous SNV COL6A2:NM_001849:exon28:c.G2980A:p.A994T "Bethlem myopathy 1, Autosomal recessive, Autosomal dominant;Ullrich congenital muscular dystrophy 1, Autosomal recessive, Autosomal dominant" 21q22.3 0.0124 0.0009 0.0005 0.1297 0.0147 0.002 0.0111 0.0057 rs117931394 0.507 T 0.549 P 0.051 B 0.117 N 0.999 D 0.85 L -1.12 T -0.35 N 0.209 1.045 10.91 0.912 0.686 D -1.167 T 0.001 T 0.718 0 2.38 -0.011 0.093 0.261 0.002 7.483 0.007576 0 0.001359 0 0 0 0.02454 0.022727 chr22 17592287 17592287 G A UTR3 ATP6V1E1 NM_001039367:c.*387C>T;NM_001696:c.*387C>T;NM_001039366:c.*387C>T . . . 22q11.21 . . . . . . . . rs7414 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 32814019 32814019 C T intronic SYN3;TIMP3 . . . . 22q12.3 . . . . . . . . rs738992 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 32825389 32825389 G A intronic SYN3;TIMP3 . . . . 22q12.3 . . . . . . . . rs130291 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 36281354 36281354 G A UTR3 MYH9 NM_002473:c.*1314C>T . . "Deafness, autosomal dominant 17, Autosomal dominant;Epstein syndrome, Autosomal dominant;Fechtner syndrome, Autosomal dominant;Macrothrombocytopenia and progressive sensorineural deafness, Autosomal dominant;May-Hegglin anomaly, Autosomal dominant;Sebastian syndrome, Autosomal dominant" 22q12.3 . . . . . . . . rs2481 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 36332465 36332465 C T intronic MYH9 . . . "Deafness, autosomal dominant 17, Autosomal dominant;Epstein syndrome, Autosomal dominant;Fechtner syndrome, Autosomal dominant;Macrothrombocytopenia and progressive sensorineural deafness, Autosomal dominant;May-Hegglin anomaly, Autosomal dominant;Sebastian syndrome, Autosomal dominant" 22q12.3 . . . . . . . . rs773733461 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 38483683 38483683 G A UTR3 DDX17 NM_001098504:c.*2252C>T;NM_006386:c.*2252C>T . . . 22q13.1 . . . . . . . . rs1043402 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 38861598 38861598 C T UTR3 CBX6 NM_001303494:c.*4611G>A;NM_014292:c.*4611G>A . . . 22q13.1 . . . . . . . . rs5757313 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . chr22 39522353 39522353 A G exonic ATF4 . synonymous SNV "ATF4:NM_001675:exon2:c.A807G:p.V269V,ATF4:NM_182810:exon3:c.A807G:p.V269V" . 22q13.1 7.24E-05 0.0001 0 0.0009 0 0 0 0 rs568793240 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .