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["Supplemental Table 1.Core bacterial microbiome of each plant ecological niche. Significant differences at the 95% confidence interval (P<0.05) between the plant niches are indicated by lower-case letters (P)."]
["Phylum","C_Fruit",null,"O_Fruit",null,"C_Leaf",null,"O_Leaf",null,"C_Root",null,"O_Root",null,"C_Soil",null,"O_Soil"]
[null,"%","P","%","P","%","P","%","P","%","P","%","P","%","P","%","P"]
["Proteobacteria",78.77,"a",64.32,"b",42.23,"c",27.17,"d",69.72,"ab",59.72,"b",59.38,"b",57.36,"b"]
["Actinobacteria",8.86,"c",21.48,"ab",15.73,"bc",7.89,"c",22.4,"ab",28.17,"a",15.04,"bc",11.17,"c"]
["Bacteroidetes",1.49,"c",6.76,"c",20.31,"b",34.36,"a",1.11,"c",2.21,"c",2.17,"c",6.43,"c"]
["Acidobacteria",5.71,"c",1.19,"d",0.55,"d",0.29,"d",2.34,"d",2.77,"d",16.56,"a",13.33,"b"]
["Fusobacteria",0,"c",0.06,"c",6.12,"b",22.53,"a",0,"c",0.01,"c",0,"c",0,"c"]
["Firmicutes",1.71,"c",3.55,"bc",10.17,"a",5.03,"b",1.36,"c",2.64,"bc",2.03,"bc",1.72,"c"]
["Unclassified",0.07,"b",0.35,"b",3.74,"a",2.1,"ab",0.11,"b",0.47,"b",0.22,"b",0.11,"b"]
["Chloroflexi",0.68,"ab",0.34,"ab",0.13,"b",0.09,"b",1.15,"ab",0.64,"ab",0.9,"ab",1.2,"a"]
["Gemmatimonadetes",0.42,"bc",0.25,"bc",0.05,"c",0.01,"c",0.12,"bc",0.35,"bc",0.58,"b",2.63,"a"]
["Verrucomicrobia",0.38,"b",0.18,"bc",0.02,"c",0.03,"c",0.31,"bc",0.41,"b",0.48,"b",1.34,"a"]
["Others",1.9,"b",1.52,"b",0.95,"b",0.5,"b",1.37,"b",2.63,"ab",2.65,"ab",4.71,"a"]
["Note: C, conventional farming; O, organic farming"]

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