{"text_format":"3","workbook":"xls","n_sheets":3,"sheets":["Table S1","Table S2","Table S3"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Table S1","index":0,"n_rows":34,"n_cols":7,"rows_kept":34,"merged":[[0,6,0,8],[19,6,19,8]],"flags":["formulas_cached_only"]}
["Phenotypic correlation (Pearson correlation coefficients) in year 2009",{"$nulls":5},"Significance at P<=0.0001 level"]
[null,"dry inflor weight","inflor length","inflor width","whorl number"]
["dry inflor weight",null,0.08,0.04,0.12]
["inflor length",null,null,0.14,-0.03]
["inflor width",{"$nulls":3},-0.07]
[]
[]
[]
[]
[null,"total plant height","base-flag length","rachis-flag length","nodes","dry stalk weight","days to flower"]
["total plant height",null,0.93,0.17,0.41,0.61,0.29]
["base-flag length",null,null,0.003,0.52,0.7,0.37]
["rachis-flag length",{"$nulls":3},-0.23,-0.04,-0.23]
["nodes",{"$nulls":4},0.6,0.71]
["dry stalk weight",{"$nulls":5},0.54]
[]
[]
[]
[]
["Phenotypic correlation (Pearson correlation coefficients) in year 2010",{"$nulls":5},"Significance at P<=0.0001 level"]
[]
[]
[null,"dry inflor weight","inflor length","inflor width","whorl number"]
["dry inflor weight",null,0.1,0.17,0.02]
["inflor length",null,null,0.03,0.12]
["inflor width",{"$nulls":3},0.2]
[]
[]
[null,"total plant height","base-flag length","rachis-flag length","nodes","dry stalk weight","days to flower"]
["total plant height",null,0.97,0.22,0.49,0.57,0.34]
["base-flag length",null,null,0.06,0.55,0.58,0.37]
["rachis-flag length",{"$nulls":3},-0.09,0.07,-0.02]
["nodes",{"$nulls":4},0.46,0.67]
["dry stalk weight",{"$nulls":5},0.49]

{"sheet":"Table S2","index":1,"n_rows":78,"n_cols":5,"rows_kept":78,"flags":["formulas_cached_only"]}
["Trait name","Chromosome","Start (bp)","Stop (bp)","Reference"]
["awn presence","chr3",69739686,74441160,"Hart et al., 2001"]
["base-flag length","chr4",57975256,64929593,"BTxSP QTL"]
["base-flag length","chr5",54818513,56456906,"BTxSP QTL"]
["base-flag length","chr7",58431360,58979855,"BTxSP QTL"]
["base-flag length","chr8",156771,4467854,"BTxSP QTL"]
["base-flag length","chr9",55087470,59162327,"BTxSP QTL"]
["base-flag length","chr10",233463,1221485,"BTxSP QTL"]
["culm length","chr1",52708000,55123818,"Hart et al., 2001"]
["culm length","chr1",58925463,64938442,"Hart et al., 2001"]
["culm length","chr9",53972331,57010750,"Feltus et al., 2006"]
["days to flower","chr4",5136298,5399990,"Kong et al., 2012"]
["days to flower","chr8",49130616,51219037,"Kong et al., 2012"]
["days to flower","chr6",58257387,62208784,"Shiringani et al., 2010"]
["days to flower","chr6",41727851,50745659,"Paterson et al., 1995"]
["days to flower","chr6",38005075,45215973,"Lin et al., 1995"]
["days to flower","chr6",1,31013572,"Kebede et al., 2001"]
["days to flower","chr3",61822430,67824056,"Shiringani et al., 2010"]
["days to flower","chr8",50508611,55460251,"Brown et al., 2006"]
["days to flower","chr10",1,10995820,"Ritter et al., 2008"]
["days to flower","chr4",48802394,51249797,"Shiringani et al., 2010"]
["days to flower","chr4",48576873,59266909,"Ritter et al., 2008"]
["days to flower","chr1",50267690,55123818,"Ritter et al., 2008"]
["days to flower","chr2",61550813,66088144,"Lin et al., 1995"]
["days to flower","chr9",841798,2438117,"Brown et al., 2006"]
["days to flower","chr9",59138530,59635592,"Feltus et al., 2006"]
["days to flower","chr9",53972331,57010750,"Feltus et al., 2006"]
["dry mass","chr10",10996433,58245284,"Ritter et al., 2008"]
["dry mass","chr1",50267690,55123818,"Ritter et al., 2008"]
["flag-rachis length","chr6",58409334,60755371,"BTxSP QTL"]
["flag-rachis length","chr9",2986048,6100375,"BTxSP QTL"]
["nodes","chr3",3459620,6187799,"BTxSP QTL"]
["nodes","chr3",51176717,59488153,"BTxSP QTL"]
["nodes","chr4",12452369,51249797,"BTxSP QTL"]
["nodes","chr4",12452369,58843428,"BTxSP QTL"]
["nodes","chr8",4467743,5260207,"BTxSP QTL"]
["nodes","chr8",49130616,51902995,"BTxSP QTL"]
["nodes","chr9",2986048,4242440,"BTxSP QTL"]
["nodes","chr9",55087470,59162327,"BTxSP QTL"]
["panicle length","chr8",2965438,55460251,"Hart et al., 2001"]
["panicle length","chr7",54201209,61172136,"Srinivas et al., 2009"]
["panicle length","chr7",4593563,61172136,"Hart et al., 2001"]
["panicle length","chr6",1,49285588,"Srinivas et al., 2009"]
["panicle length","chr6",3042495,3173655,"Srinivas et al., 2009"]
["panicle length","chr2",63385854,67116835,"Srinivas et al., 2009"]
["panicle length","chr9",1366902,4242867,"Hart et al., 2001"]
["panicle width","chr3",1,55215364,"Hart et al., 2001"]
["panicle width","chr5",6193008,54508315,"Hart et al., 2001"]
["panicle width","chr1",68741706,73840631,"Hart et al., 2001"]
["panicle width","chr1",66750018,68741864,"Hart et al., 2001"]
["panicle width","chr1",7554121,19135631,"Hart et al., 2001"]
["plant height","chr5",54280282,56456906,"BTxSP QTL"]
["plant height","chr8",156771,4467854,"BTxSP QTL"]
["plant height","chr9",4242420,6100375,"BTxSP QTL"]
["plant height","chr9",55087470,59162327,"BTxSP QTL"]
["plant height","chr10",233463,1221485,"BTxSP QTL"]
["plant height","chr3",55215143,68161815,"Ritter et al., 2008"]
["plant height","chr3",55866462,67437541,"Lin et al., 1995"]
["plant height","chr3",1,3836552,"Brown et al., 2006"]
["plant height","chr8",45875597,48205902,"Shiringani et al., 2010"]
["plant height","chr5",42265169,62352331,"Ritter et al., 2008"]
["plant height","chr4",48802394,58580215,"Shiringani et al., 2010"]
["plant height","chr7",56915262,57373894,"Lin et al., 1995"]
["plant height","chr7",51120426,61172136,"Brown et al., 2006"]
["plant height","chr7",54201209,61172136,"Srinivas et al., 2009"]
["plant height","chr6",31013086,54164328,"Kebede et al., 2001"]
["plant height","chr6",54624866,60106854,"Kebede et al., 2001"]
["plant height","chr6",3173536,49285588,"Brown et al., 2006"]
["plant height","chr6",4296219,32244692,"Lin et al., 1995"]
["plant height","chr6",57418572,58257550,"Srinivas et al., 2009"]
["plant height","chr6",1,49285588,"Srinivas et al., 2009"]
["plant height","chr6",58257387,62208784,"Shiringani et al., 2010"]
["plant height","chr1",55123797,66750147,"Ritter et al., 2008"]
["plant height","chr1",69318028,72905464,"Lin et al., 1995"]
["plant height","chr1",23806238,61211720,"Shiringani et al., 2010"]
["plant height","chr2",61952729,63386031,"Shiringani et al., 2010"]
["plant height","chr9",53972331,57010750,"Lin et al., 1995"]
["plant height","chr9",571950,5164252,"Lin et al., 1995"]

{"sheet":"Table S3","index":2,"n_rows":114,"n_cols":9,"rows_kept":114,"flags":["formulas_cached_only"]}
["Trait name","Year","Chromosome","Start (bp)","Stop (bp)","Significant SNP (the lowest P)","Alleles","The lowest P value (CMLM)","Minor allele frequency "]
["awn presence","2009","chr1","1875693","3661550","2303510","G/C","6.29e-08","0.0765"]
["awn presence","2009","chr1","62827819","63101628","63101628","T/G","2.99e-06","0.0612"]
["awn presence","2009","chr3","68912931","74241979","72702502","G/T","3.78e-10","0.325"]
["awn presence","2009","chr4","56780604","64587380","61083188","G/C","2.11e-06","0.0646"]
["awn presence","2009","chr7","45990","3739001","3363337","G/C","2.12e-06","0.231"]
["awn presence","2009","chr7","4459218","4541514","4541514","T/A","1.95e-06","0.0493"]
["awn presence","2009","chr7","54152725","54173142","54152725","T/A","6.68e-06","0.0289"]
["awn presence","2009","chr8","40163251","44686575","43045060","C/G","4.43e-06","0.403"]
["awn presence","2009","chr10","15776645","17890596","15948822","A/G","9.07e-06","0.301"]
["awn presence","2009","chr10","50593659","50707846","50653255","C/T","3.04e-06","0.0782"]
["awn presence","2009","chr10","53551423","53635128","53597053","G/A","1.19e-06","0.102"]
["awn presence","2010","chr1","18526721","18526755","18526755","T/A","7.68e-06","0.0962"]
["awn presence","2010","chr2","6059119","6073421","6062909","G/C","3.29e-06","0.066"]
["awn presence","2010","chr3","69159078","74117008","72702502","G/T","8.71e-10","0.306"]
["awn presence","2010","chr9","2851755","2851758","2851755","T/G","1.49e-06","0.0264"]
["awn presence","2010","chr10","14073929","14534563","14443720","G/A","5.69e-06","0.145"]
["awn presence","2010","chr10","14712464","19948361","16260899","C/T","1.03e-06","0.145"]
["awn presence","2010","chr10","43897095","45708924","44232983","C/T","9.38e-07","0.0792"]
["base-flag length","2009","chr6","4293124","39625817","14134470","A/G","3.29e-09","0.00852"]
["base-flag length","2009","chr6","41165655","48905545","42736415","G/A","8.1e-13","0.328"]
["base-flag length","2009","chr7","56212707","59864685","58390034","G/T","1.04e-06","0.422"]
["base-flag length","2009","chr9","54011658","59525224","57236791","G/A","2.45e-15","0.368"]
["base-flag length","2010","chr5","10839869","11751155","11627267","C/G","1.1e-06","0.205"]
["base-flag length","2010","chr5","43828364","45518198","44215382","T/G","4.67e-07","0.00877"]
["base-flag length","2010","chr6","4293124","39625817","7180983","C/T","6.12e-08","0.00877"]
["base-flag length","2010","chr6","41165655","48905545","42736415","G/A","5.39e-12","0.326"]
["base-flag length","2010","chr7","56212707","59864685","58390037","G/A","5.06e-06","0.434"]
["base-flag length","2010","chr9","54011658","59525224","57236791","G/A","1.01e-12","0.371"]
["dry inflor weight","2009","chr9","53450914","58934832","57259904","A/G","1.01e-06","0.116"]
["dry inflor weight","2010","chr1","61053401","61135491","61135491","A/T","4.11e-06","0.0301"]
["dry inflor weight","2010","chr6","55173080","55551565","55518790","A/T","7.31e-06","0.108"]
["dry inflor weight","2010","chr7","10026950","16813019","10030272","C/A","2.29e-06","0.01"]
["dry inflor weight","2010","chr7","50476109","56065183","53629234","T/G","5.63e-06","0.0241"]
["dry stalk weight","2009","chr2","4266632","4796420","4660436","A/T","2.01e-08","0.0184"]
["dry stalk weight","2009","chr3","15929626","15934868","15934700","C/T","6.72e-08","0.0227"]
["dry stalk weight","2009","chr4","59045251","60096269","59713892","G/A","4.82e-06","0.0567"]
["dry stalk weight","2009","chr4","60147766","61452027","60625268","G/C","2.06e-06","0.0949"]
["dry stalk weight","2009","chr4","62317089","63417062","63417038","T/C","1.5e-07","0.0354"]
["dry stalk weight","2009","chr4","63435278","64850520","64444878","A/G","2.39e-07","0.0439"]
["dry stalk weight","2009","chr6","4181608","40364135","4478401","A/T","7.73e-09","0.0241"]
["dry stalk weight","2009","chr6","41077303","46073826","42736415","G/A","1.09e-07","0.326"]
["dry stalk weight","2009","chr6","49632278","52202199","50000145","A/C","1.52e-06","0.0255"]
["dry stalk weight","2009","chr9","4692727","5217965","4725401","G/A","5.63e-09","0.0822"]
["dry stalk weight","2009","chr9","56626810","59515431","57310782","C/T","5.82e-09","0.118"]
["dry stalk weight","2010","chr2","30106199","42437091","31143027","C/T","1.14e-06","0.0392"]
["dry stalk weight","2010","chr6","4428096","5857211","5615397","C/A","9e-06","0.048"]
["dry stalk weight","2010","chr6","40073787","47974532","42736415","G/A","2.55e-10","0.324"]
["dry stalk weight","2010","chr7","12048254","14509308","12889635","G/A","7.58e-06","0.0203"]
["dry stalk weight","2010","chr7","15532502","19775051","17921134","G/C","1.01e-06","0.0422"]
["dry stalk weight","2010","chr9","55048204","59543787","57231987","G/C","1.21e-07","0.363"]
["days to flower","2009","chr6","4427642","39007151","14134470","A/G","4.79e-09","0.00852"]
["days to flower","2009","chr6","40244005","46853808","42641061","A/C","3.05e-08","0.0071"]
["days to flower","2009","chr9","56375715","59515431","59010379","A/G","1.6e-06","0.295"]
["days to flower","2010","chr6","4427642","39007151","14134470","A/G","5.76e-08","0.00718"]
["days to flower","2010","chr6","40244005","46853808","42736415","G/A","2.04e-06","0.323"]
["days to flower","2010","chr9","56375715","59515431","58757062","A/G","3.6e-06","0.0948"]
["flag-rachis length","2009","chr2","65739688","66088441","65997118","G/A","1.13e-06","0.237"]
["flag-rachis length","2009","chr6","49432232","51503545","50745257","G/A","5.46e-06","0.0753"]
["flag-rachis length","2010","chr5","51536125","52086484","52066043","G/A","2.51e-06","0.0848"]
["flag-rachis length","2010","chr6","37881800","42206663","40391622","C/T","7.69e-07","0.038"]
["flag-rachis length","2010","chr6","49624529","52283672","49895413","C/T","5.77e-06","0.0351"]
["flag-rachis length","2010","chr10","53223709","53317504","53272052","C/T","5.42e-06","0.2"]
["inflor length","2009","chr5","17037214","41813808","17518239","G/C","5.68e-06","0.13"]
["inflor length","2010","chr1","69348","13117417","1919805","A/G","3.65e-10","0.0113"]
["inflor length","2010","chr2","68816747","69280842","68816747","G/C","4.9e-07","0.0377"]
["inflor length","2010","chr6","42258173","47038936","46853308","C/T","4.78e-15","0.0132"]
["inflor length","2010","chr8","10231169","12383484","10231169","C/T","1.16e-06","0.0396"]
["inflor length","2010","chr8","43252110","49886386","48761644","A/C","7.78e-06","0.487"]
["inflor length","2010","chr10","4556438","4803470","4803445","T/C","1.94e-09","0.0189"]
["inflor width","2009","chr1","80552","5806609","5213132","C/T","1.97e-08","0.0169"]
["inflor width","2009","chr1","6721470","9060791","6972831","G/C","5.7e-06","0.0254"]
["inflor width","2009","chr1","13829802","14077199","13934674","G/A","3.3e-06","0.0438"]
["inflor width","2009","chr1","60678072","61993538","61184007","A/T","3.53e-06","0.0198"]
["inflor width","2009","chr1","70607922","72503916","72490236","G/A","2.1e-08","0.0438"]
["inflor width","2009","chr2","8071242","20723469","8285869","C/T","3.96e-07","0.0395"]
["inflor width","2009","chr2","20928477","22408323","21258916","G/C","1.44e-06","0.16"]
["inflor width","2009","chr3","865600","6306112","3676133","G/C","3.71e-07","0.0325"]
["inflor width","2009","chr3","15627942","48422013","20827193","C/T","1.14e-07","0.0226"]
["inflor width","2009","chr3","53606736","55423638","53631467","C/G","6.2e-06","0.126"]
["inflor width","2009","chr3","70732991","70842786","70732991","T/G","8.83e-07","0.0424"]
["inflor width","2009","chr5","17382467","20891646","18851072","G/A","3.81e-06","0.0169"]
["inflor width","2009","chr7","8780870","9838613","8895730","C/T","1.27e-06","0.048"]
["inflor width","2009","chr7","16163319","49919040","39553901","C/G","5.51e-06","0.0198"]
["inflor width","2009","chr9","51011511","56169783","53213558","C/G","4.56e-08","0.0212"]
["inflor width","2009","chr9","56384240","58196689","56989894","G/A","1.29e-06","0.0113"]
["inflor width","2009","chr10","52315955","54722422","54662253","C/G","1.92e-07","0.1"]
["nodes","2009","chr6","3231503","39564167","14134521","T/A","1.49e-08","0.0094"]
["nodes","2009","chr6","41500709","46339964","42641061","A/C","8.07e-09","0.00784"]
["nodes","2009","chr9","56373253","59602839","59515431","C/A","4.65e-07","0.35"]
["nodes","2010","chr1","59767016","62817109","62154791","T/G","7.69e-07","0.0913"]
["nodes","2010","chr5","61416527","62326490","62163497","T/C","8.46e-07","0.0377"]
["nodes","2010","chr6","3231503","41980101","40343762","G/A","3.95e-07","0.103"]
["nodes","2010","chr6","42168438","48702058","42736415","G/A","7.64e-06","0.323"]
["nodes","2010","chr9","55765487","59602839","57916680","A/G","3.08e-09","0.387"]
["nodes","2010","chr10","3728881","4596824","3734365","G/A","1.54e-06","0.0565"]
["nodes","2010","chr10","55144781","55398252","55363525","C/T","9.47e-08","0.0261"]
["plant height","2009","chr6","4293124","39625817","36628658","T/G","9.12e-08","0.298"]
["plant height","2009","chr6","41165655","48905545","42138323","G/A","3.59e-12","0.323"]
["plant height","2009","chr7","56212707","59864685","56824751","A/C","9.17e-06","0.119"]
["plant height","2009","chr9","54011658","59525224","57236791","G/A","1.64e-15","0.366"]
["plant height","2010","chr4","52460880","52740480","52613542","G/A","9.45e-08","0.121"]
["plant height","2010","chr6","4293124","48905545","42736415","G/A","7.06e-12","0.325"]
["plant height","2010","chr9","54011658","59525224","57236791","G/A","5.17e-15","0.371"]
["seed color Lab a","2009","chr1","57017032","68413103","61453639","T/C","4.75e-11","0.323"]
["seed color Lab L","2009","chr1","57017032","68413103","61453639","T/C","6.93e-09","0.323"]
["seed color Lab L","2009","chr4","57593530","62881403","61862778","A/C","3.89e-06","0.478"]
["seed color b","2009","chr1","58113965","66633184","61453639","T/C","9.95e-10","0.323"]
["seed color g","2009","chr1","57017032","68413103","61453639","T/C","7.36e-10","0.323"]
["seed color g","2009","chr4","57593530","62881403","61862778","A/C","4.38e-06","0.478"]
["seed color r","2009","chr1","58113965","66633184","61702637","G/C","1.06e-06","0.113"]
["seed color r","2009","chr4","57593530","62881403","58815181","C/G","1.62e-08","0.065"]
["whorls","2010","chr1","52378387","53876258","52858678","T/C","1.1e-06","0.325"]
["whorls","2010","chr1","70353015","71234623","70739754","A/G","2.92e-07","0.442"]