D03 RepeatMasker similarity 40635355 40635431 . + . Name=Simple_repeat;Target=(AATTAAA)n 1 73; GhWOX3b_Dt downstream D03 RepeatMasker similarity 40637235 40637264 . + . Name=Simple_repeat;Target=(TAAACT)n 1 31; GhWOX3b_Dt downstream D03 RepeatMasker similarity 40637810 40637837 . + . Name=Simple_repeat;Target=(TAAAA)n 1 28; GhWOX3b_Dt downstream D03 RepeatMasker similarity 40638084 40638122 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 39; GhWOX3b_Dt downstream D03 RepeatMasker similarity 40640757 40640808 . + . Name=Simple_repeat;Target=(TATT)n 1 51; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40640873 40640901 . + . Name=Simple_repeat;Target=(ATTT)n 1 31; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40641398 40641422 . + . Name=Simple_repeat;Target=(AAAAG)n 1 25; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40641712 40641753 . + . Name=Simple_repeat;Target=(ATCTAT)n 1 42; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40641990 40642047 . + . Name=Simple_repeat;Target=(AT)n 1 59; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40642525 40642572 . + . Name=Simple_repeat;Target=(AT)n 1 48; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40643406 40643463 . + . Name=Simple_repeat;Target=(TAATT)n 1 63; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40643406 40643413 . + . Name=Simple_repeat;Target=(TAATT)n 1 60; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40643414 40643460 . + . Name=Simple_repeat;Target=(TTTAATT)n 1 49; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40643898 40643930 . + . Name=Simple_repeat;Target=(T)n 1 33; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40644645 40644677 . + . Name=Simple_repeat;Target=(TATTGT)n 1 32; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40646081 40646186 . + . Name=Simple_repeat;Target=(TAATATA)n 1 108; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40646181 40646259 . + . Name=Simple_repeat;Target=(AGAA)n 1 80; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40646283 40646351 . + . Name=Simple_repeat;Target=(GTTTTTA)n 1 64; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40646908 40646953 . + . Name=Simple_repeat;Target=(TTGAAA)n 1 46; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40647379 40647488 . + . Name=Simple_repeat;Target=(ATATG)n 1 110; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40647379 40647393 . + . Name=Simple_repeat;Target=(ATATG)n 1 47; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40647394 40647471 . + . Name=Simple_repeat;Target=(AAATGAT)n 1 76; GhWOX3b_Dt upstream D03 RepeatMasker similarity 40647472 40647488 . + . Name=Simple_repeat;Target=(ATATG)n 48 110; GhWOX3b_Dt upstream A01 RepeatMasker similarity 28205384 28205424 . + . Name=Simple_repeat;Target=(TTACATT)n 1 38; GhWOX4a_At upstream A01 RepeatMasker similarity 28206087 28206265 . + . Name=Unspecified;Target=rnd-2_family-20 8377 8548; GhWOX4a_At upstream A01 RepeatMasker similarity 28208214 28208272 . + . Name=Simple_repeat;Target=(AAGTTTT)n 1 59; GhWOX4a_At upstream A01 RepeatMasker similarity 28208803 28208843 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 41; GhWOX4a_At upstream A01 RepeatMasker similarity 28208951 28209060 . + . Name=Simple_repeat;Target=(TTAAA)n 1 107; GhWOX4a_At upstream A01 RepeatMasker similarity 28209635 28209677 . + . Name=Simple_repeat;Target=(TAA)n 1 42; GhWOX4a_At upstream A01 RepeatMasker similarity 28212732 28212756 . + . Name=Simple_repeat;Target=(GAT)n 1 24; GhWOX4a_At gene_region A01 RepeatMasker similarity 28213394 28213451 . + . Name=Simple_repeat;Target=(AATTTT)n 1 51; GhWOX4a_At downstream A01 RepeatMasker similarity 28215507 28215568 . + . Name=Simple_repeat;Target=(TTATGAA)n 1 64; GhWOX4a_At downstream A01 RepeatMasker similarity 28216927 28217105 . - . Name=Unspecified;Target=rnd-2_family-20 8377 8547; GhWOX4a_At downstream A01 RepeatMasker similarity 28219194 28219388 . + . Name=Unspecified;Target=rnd-2_family-20 6262 6458; GhWOX4a_At downstream A01 RepeatMasker similarity 28219405 28219834 . + . Name=Unspecified;Target=rnd-2_family-20 6295 6722; GhWOX4a_At downstream A01 RepeatMasker similarity 28220100 28220157 . + . Name=Simple_repeat;Target=(TTATGAT)n 1 57; GhWOX4a_At downstream A01 RepeatMasker similarity 28221482 28221517 . + . Name=Simple_repeat;Target=(TAATTCA)n 1 36; GhWOX4a_At downstream D07 RepeatMasker similarity 38148157 38149139 . + . Name=LTR/Gypsy;Target=Gypsy-33_ALY-I 2385 3233; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38149949 38149999 . + . Name=LTR/Gypsy;Target=Gypsy-33_ALY-I 4337 4387; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38150370 38150701 . + . Name=LTR/Gypsy;Target=Gypsy-33_ALY-I 4698 4960; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38150791 38150977 . + . Name=LTR/Gypsy;Target=Gypsy-33_ALY-I 4985 5175; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38153439 38153482 . + . Name=Simple_repeat;Target=(T)n 1 44; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38155512 38155545 . + . Name=Simple_repeat;Target=(ATTAAA)n 1 35; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38156178 38156216 . + . Name=Simple_repeat;Target=(CTTTCAA)n 1 39; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38156360 38156425 . + . Name=Simple_repeat;Target=(ATGAGA)n 1 68; GhWOX13a_Dt upstream D07 RepeatMasker similarity 38159993 38160024 . + . Name=Simple_repeat;Target=(TATTT)n 1 31; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38160939 38161144 . - . Name=Unspecified;Target=rnd-2_family-14 1 216; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38162018 38162239 . - . Name=Unspecified;Target=rnd-2_family-14 3320 3541; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38162083 38162242 . + . Name=LTR/Copia;Target=ATCopia34_I-int 964 1123; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38162365 38163290 . + . Name=LTR/Copia;Target=ATCopia34_I-int 1045 1973; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38163507 38165103 . + . Name=LTR/Copia;Target=ATCopia34_I-int 2239 3808; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38165369 38165568 . - . Name=Unspecified;Target=rnd-2_family-14 2 215; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38166846 38166901 . + . Name=Simple_repeat;Target=(AAA)n 1 56; GhWOX13a_Dt downstream D07 RepeatMasker similarity 38167619 38167715 . + . Name=Simple_repeat;Target=(TTTAATT)n 1 105; GhWOX13a_Dt downstream A07 RepeatMasker similarity 15544452 15544499 . + . Name=Simple_repeat;Target=(AATTC)n 1 46; GhWOX2a_At downstream A07 RepeatMasker similarity 15545193 15545377 . + . Name=Unspecified;Target=rnd-2_family-20 8376 8548; GhWOX2a_At downstream A07 RepeatMasker similarity 15545441 15545488 . + . Name=Simple_repeat;Target=(AATTC)n 1 46; GhWOX2a_At downstream A07 RepeatMasker similarity 15546179 15546363 . + . Name=Unspecified;Target=rnd-2_family-20 8376 8548; GhWOX2a_At downstream A07 RepeatMasker similarity 15547111 15547136 . + . Name=Simple_repeat;Target=(AGATT)n 1 27; GhWOX2a_At downstream A07 RepeatMasker similarity 15549085 15549126 . + . Name=Simple_repeat;Target=(TATTT)n 1 41; GhWOX2a_At downstream A07 RepeatMasker similarity 15553526 15553564 . + . Name=Simple_repeat;Target=(TTGCTT)n 1 39; GhWOX2a_At gene_region A07 RepeatMasker similarity 15555773 15555878 . + . Name=Simple_repeat;Target=(TAAAA)n 1 104; GhWOX2a_At upstream A07 RepeatMasker similarity 15557373 15557423 . + . Name=Simple_repeat;Target=(AGGGGG)n 1 49; GhWOX2a_At upstream A07 RepeatMasker similarity 15559531 15559843 . - . Name=Unspecified;Target=rnd-2_family-188 12 321; GhWOX2a_At upstream A07 RepeatMasker similarity 15559537 15559581 . + . Name=Low_complexity;Target=A-rich 1 45; GhWOX2a_At upstream A07 RepeatMasker similarity 15562611 15562630 . + . Name=Simple_repeat;Target=(T)n 1 20; GhWOX2a_At upstream D13 RepeatMasker similarity 59936187 59936217 . + . Name=Simple_repeat;Target=(TTAAA)n 1 33; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59940013 59940066 . + . Name=Simple_repeat;Target=(AAAAATGA)n 1 59; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59940322 59940348 . + . Name=Simple_repeat;Target=(GGCCC)n 1 26; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59940613 59940657 . + . Name=Simple_repeat;Target=(AT)n 1 48; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59941528 59941619 . + . Name=Simple_repeat;Target=(ATA)n 1 92; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59942342 59942417 . + . Name=Simple_repeat;Target=(TAAATTT)n 1 70; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59942597 59942634 . + . Name=Simple_repeat;Target=(TAAAATA)n 1 41; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59943670 59943699 . + . Name=Simple_repeat;Target=(A)n 1 30; GhWOX2b_Dt downstream D13 RepeatMasker similarity 59945457 59945494 . + . Name=Simple_repeat;Target=(CCGCCA)n 1 38; GhWOX2b_Dt gene_region D13 RepeatMasker similarity 59946193 59946251 . + . Name=Simple_repeat;Target=(TATA)n 1 61; GhWOX2b_Dt upstream D13 RepeatMasker similarity 59952177 59952194 . + . Name=Simple_repeat;Target=(TA)n 1 18; GhWOX2b_Dt upstream D13 RepeatMasker similarity 59952259 59952321 . + . Name=Simple_repeat;Target=(AATTA)n 1 65; GhWOX2b_Dt upstream D11 RepeatMasker similarity 65606812 65606840 . + . Name=Simple_repeat;Target=(ATAAA)n 1 30; GhWOX10_Dt downstream D11 RepeatMasker similarity 65607221 65607244 . + . Name=Simple_repeat;Target=(A)n 1 24; GhWOX10_Dt downstream D11 RepeatMasker similarity 65607672 65607724 . + . Name=Simple_repeat;Target=(AATATAA)n 1 52; GhWOX10_Dt downstream D11 RepeatMasker similarity 65608719 65608767 . + . Name=Simple_repeat;Target=(AAAAT)n 1 46; GhWOX10_Dt downstream D11 RepeatMasker similarity 65609237 65609276 . + . Name=Simple_repeat;Target=(AATAAAT)n 1 41; GhWOX10_Dt downstream D11 RepeatMasker similarity 65613181 65613209 . + . Name=Simple_repeat;Target=(AATAA)n 1 31; GhWOX10_Dt downstream D11 RepeatMasker similarity 65614657 65614711 . + . Name=Simple_repeat;Target=(AATA)n 1 53; GhWOX10_Dt downstream D11 RepeatMasker similarity 65616261 65616371 . + . Name=Simple_repeat;Target=(AAT)n 1 113; GhWOX10_Dt gene_region D11 RepeatMasker similarity 65616347 65616402 . + . Name=Simple_repeat;Target=(CAA)n 1 61; GhWOX10_Dt gene_region D11 RepeatMasker similarity 65616716 65616764 . + . Name=Simple_repeat;Target=(TAAA)n 1 49; GhWOX10_Dt gene_region D11 RepeatMasker similarity 65617475 65617502 . + . Name=Simple_repeat;Target=(GGTCG)n 1 29; GhWOX10_Dt upstream D11 RepeatMasker similarity 65617890 65617947 . + . Name=Simple_repeat;Target=(AATTCA)n 1 58; GhWOX10_Dt upstream D11 RepeatMasker similarity 65618318 65618384 . + . Name=Simple_repeat;Target=(TAATAT)n 1 67; GhWOX10_Dt upstream D11 RepeatMasker similarity 65619558 65619917 . - . Name=Unspecified;Target=rnd-2_family-188 1 375; GhWOX10_Dt upstream D11 RepeatMasker similarity 65626581 65626599 . + . Name=Simple_repeat;Target=(TA)n 1 19; GhWOX10_Dt upstream D01 RepeatMasker similarity 43691349 43691388 . + . Name=Simple_repeat;Target=(TAA)n 1 39; GhWOX6_Dt downstream D01 RepeatMasker similarity 43692591 43692618 . + . Name=Simple_repeat;Target=(TTTTC)n 1 28; GhWOX6_Dt downstream D01 RepeatMasker similarity 43692786 43692814 . + . Name=Simple_repeat;Target=(T)n 1 29; GhWOX6_Dt downstream D01 RepeatMasker similarity 43694791 43694809 . + . Name=Simple_repeat;Target=(T)n 1 19; GhWOX6_Dt downstream D01 RepeatMasker similarity 43697940 43697999 . + . Name=Simple_repeat;Target=(TTTAAAG)n 1 62; GhWOX6_Dt downstream D01 RepeatMasker similarity 43697944 43697998 . + . Name=Simple_repeat;Target=(AAGTTT)n 1 50; GhWOX6_Dt downstream D01 RepeatMasker similarity 43698860 43698912 . + . Name=Simple_repeat;Target=(CTTT)n 1 52; GhWOX6_Dt downstream D01 RepeatMasker similarity 43700788 43700807 . + . Name=Simple_repeat;Target=(TTG)n 1 20; GhWOX6_Dt gene_region D01 RepeatMasker similarity 43701530 43701572 . + . Name=Simple_repeat;Target=(GAAAA)n 1 43; GhWOX6_Dt upstream D01 RepeatMasker similarity 43701530 43701569 . + . Name=Simple_repeat;Target=(GAAAAA)n 1 41; GhWOX6_Dt upstream D01 RepeatMasker similarity 43702312 43702346 . + . Name=Simple_repeat;Target=(AT)n 1 37; GhWOX6_Dt upstream D01 RepeatMasker similarity 43702900 43702943 . + . Name=Simple_repeat;Target=(GAATT)n 1 45; GhWOX6_Dt upstream D01 RepeatMasker similarity 43706329 43706376 . + . Name=Simple_repeat;Target=(TTTAA)n 1 50; GhWOX6_Dt upstream D01 RepeatMasker similarity 43707429 43707457 . + . Name=Simple_repeat;Target=(ATG)n 1 29; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710369 43710395 . + . Name=Simple_repeat;Target=(GAAG)n 1 27; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710657 43710686 . + . Name=Simple_repeat;Target=(A)n 1 30; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710657 43710690 . + . Name=Simple_repeat;Target=(AAAAAT)n 1 34; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710658 43710690 . + . Name=Simple_repeat;Target=(AAAAAT)n 1 33; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710973 43710978 . + . Name=Simple_repeat;Target=(TAATTTA)n 1 14; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710973 43711068 . + . Name=Simple_repeat;Target=(TAATTTA)n 1 96; GhWOX6_Dt upstream D01 RepeatMasker similarity 43710979 43711039 . + . Name=Simple_repeat;Target=(AAATAA)n 1 59; GhWOX6_Dt upstream D01 RepeatMasker similarity 43711040 43711068 . + . Name=Simple_repeat;Target=(TAATTTA)n 15 96; GhWOX6_Dt upstream A05 RepeatMasker similarity 18634105 18634191 . + . Name=Simple_repeat;Target=(TTATAT)n 1 87; GhWOX4b_At downstream A05 RepeatMasker similarity 18635176 18635220 . + . Name=Simple_repeat;Target=(AAA)n 1 45; GhWOX4b_At downstream A05 RepeatMasker similarity 18635176 18635221 . + . Name=Low_complexity;Target=A-rich 1 46; GhWOX4b_At downstream A05 RepeatMasker similarity 18635178 18635221 . + . Name=Simple_repeat;Target=(AAAAG)n 1 45; GhWOX4b_At downstream A05 RepeatMasker similarity 18636708 18636744 . + . Name=Simple_repeat;Target=(AAAGAA)n 1 39; GhWOX4b_At downstream A05 RepeatMasker similarity 18637091 18637127 . + . Name=Simple_repeat;Target=(AG)n 1 39; GhWOX4b_At downstream A05 RepeatMasker similarity 18637224 18637303 . + . Name=Simple_repeat;Target=(TATT)n 1 76; GhWOX4b_At downstream A05 RepeatMasker similarity 18637449 18637503 . + . Name=Simple_repeat;Target=(TTTATTT)n 1 55; GhWOX4b_At downstream A05 RepeatMasker similarity 18638744 18638800 . + . Name=Simple_repeat;Target=(TTTAA)n 1 56; GhWOX4b_At downstream A05 RepeatMasker similarity 18638749 18638798 . + . Name=Simple_repeat;Target=(ATTT)n 1 49; GhWOX4b_At downstream A05 RepeatMasker similarity 18639068 18639138 . + . Name=Simple_repeat;Target=(TTTAT)n 1 69; GhWOX4b_At downstream A05 RepeatMasker similarity 18639193 18639241 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 49; GhWOX4b_At downstream A05 RepeatMasker similarity 18640120 18640152 . + . Name=Simple_repeat;Target=(TAAATA)n 1 35; GhWOX4b_At downstream A05 RepeatMasker similarity 18640129 18640152 . + . Name=Simple_repeat;Target=(AT)n 1 24; GhWOX4b_At downstream A05 RepeatMasker similarity 18640248 18640291 . + . Name=Simple_repeat;Target=(AATTTT)n 1 40; GhWOX4b_At downstream A05 RepeatMasker similarity 18642357 18642414 . + . Name=Simple_repeat;Target=(AAATCAT)n 1 57; GhWOX4b_At downstream A05 RepeatMasker similarity 18643737 18643768 . + . Name=Simple_repeat;Target=(A)n 1 32; GhWOX4b_At downstream A05 RepeatMasker similarity 18644665 18644696 . + . Name=Simple_repeat;Target=(AAGAA)n 1 32; GhWOX4b_At gene_region A05 RepeatMasker similarity 18645137 18645175 . + . Name=Simple_repeat;Target=(AAGAA)n 1 38; GhWOX4b_At upstream A05 RepeatMasker similarity 18646336 18646359 . + . Name=Simple_repeat;Target=(A)n 1 24; GhWOX4b_At upstream A05 RepeatMasker similarity 18646800 18646853 . + . Name=Simple_repeat;Target=(AT)n 1 56; GhWOX4b_At upstream A05 RepeatMasker similarity 18646839 18646869 . + . Name=Simple_repeat;Target=(TTAAA)n 1 32; GhWOX4b_At upstream A05 RepeatMasker similarity 18647074 18647102 . + . Name=Simple_repeat;Target=(ATATAG)n 1 31; GhWOX4b_At upstream A05 RepeatMasker similarity 18647707 18647754 . + . Name=Simple_repeat;Target=(AATTAT)n 1 48; GhWOX4b_At upstream A05 RepeatMasker similarity 18648592 18648635 . + . Name=Simple_repeat;Target=(TAAAT)n 1 47; GhWOX4b_At upstream A05 RepeatMasker similarity 18648786 18648839 . + . Name=Simple_repeat;Target=(TAA)n 1 55; GhWOX4b_At upstream A05 RepeatMasker similarity 18652498 18652576 . + . Name=Simple_repeat;Target=(ATTATA)n 1 75; GhWOX4b_At upstream A12 RepeatMasker similarity 13662210 13662238 . + . Name=Simple_repeat;Target=(AATTT)n 1 27; GhWUS1a_At downstream A12 RepeatMasker similarity 13662210 13662288 . + . Name=Simple_repeat;Target=(AATTT)n 1 73; GhWUS1a_At downstream A12 RepeatMasker similarity 13662211 13662288 . + . Name=Simple_repeat;Target=(ATTTTAT)n 1 79; GhWUS1a_At downstream A12 RepeatMasker similarity 13663899 13663954 . + . Name=Simple_repeat;Target=(AATTA)n 1 55; GhWUS1a_At downstream A12 RepeatMasker similarity 13664004 13664041 . + . Name=Simple_repeat;Target=(AAAATTC)n 1 38; GhWUS1a_At downstream A12 RepeatMasker similarity 13664317 13665417 . + . Name=Unspecified;Target=rnd-2_family-20 5282 6376; GhWUS1a_At downstream A12 RepeatMasker similarity 13665409 13666301 . + . Name=Unspecified;Target=rnd-2_family-20 6488 7374; GhWUS1a_At downstream A12 RepeatMasker similarity 13666343 13666568 . + . Name=Unspecified;Target=rnd-2_family-20 7361 7604; GhWUS1a_At downstream A12 RepeatMasker similarity 13667009 13667263 . + . Name=Unspecified;Target=rnd-2_family-20 8122 8379; GhWUS1a_At downstream A12 RepeatMasker similarity 13667364 13667402 . + . Name=Simple_repeat;Target=(AATATAA)n 1 36; GhWUS1a_At downstream A12 RepeatMasker similarity 13667738 13667785 . + . Name=Simple_repeat;Target=(TTC)n 1 48; GhWUS1a_At downstream A12 RepeatMasker similarity 13669539 13669578 . + . Name=Simple_repeat;Target=(CTT)n 1 40; GhWUS1a_At gene_region A12 RepeatMasker similarity 13672535 13672611 . + . Name=Simple_repeat;Target=(TTTAGGG)n 1 79; GhWUS1a_At upstream A12 RepeatMasker similarity 13674435 13674460 . + . Name=Simple_repeat;Target=(ATACA)n 1 27; GhWUS1a_At upstream A12 RepeatMasker similarity 13674704 13674766 . + . Name=Simple_repeat;Target=(ATCTTC)n 1 60; GhWUS1a_At upstream A12 RepeatMasker similarity 13677121 13677177 . + . Name=Simple_repeat;Target=(TTCT)n 1 53; GhWUS1a_At upstream A12 RepeatMasker similarity 13677474 13677502 . + . Name=Simple_repeat;Target=(TATCTA)n 1 31; GhWUS1a_At upstream A12 RepeatMasker similarity 13678207 13678297 . + . Name=LINE/L1;Target=ATLINE1_4 2775 2866; GhWUS1a_At upstream A12 RepeatMasker similarity 13678364 13678441 . + . Name=LINE/L1;Target=L1-3_ALy 3087 3164; GhWUS1a_At upstream A12 RepeatMasker similarity 13678510 13679072 . + . Name=LINE/L1;Target=L1-13_ALy 3317 3949; GhWUS1a_At upstream A12 RepeatMasker similarity 13679167 13679562 . + . Name=LINE/L1;Target=ATLINE1_4 4920 5242; GhWUS1a_At upstream D01 RepeatMasker similarity 19730922 19731000 . + . Name=Simple_repeat;Target=(TTTTTA)n 1 80; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19731028 19731055 . + . Name=Simple_repeat;Target=(ATTAA)n 1 27; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19731978 19732589 . + . Name=DNA/CMC-EnSpm;Target=EnSpm-8_ALy 1778 2697; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19732829 19732856 . + . Name=Simple_repeat;Target=(TGA)n 1 28; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19732882 19733034 . + . Name=DNA/CMC-EnSpm;Target=ATENSPM5 2242 2382; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19733018 19733361 . + . Name=DNA/CMC-EnSpm;Target=ATENSPM9 2975 3643; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19734253 19734336 . + . Name=DNA/CMC-EnSpm;Target=EnSpm-3_ALy 8470 8553; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19736178 19736207 . + . Name=Simple_repeat;Target=(ATTT)n 1 29; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19736819 19736865 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 47; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19737694 19737736 . + . Name=Simple_repeat;Target=(TAA)n 1 42; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19738175 19738240 . + . Name=Simple_repeat;Target=(AATAAA)n 1 65; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19738732 19738784 . + . Name=Simple_repeat;Target=(TATTTTA)n 1 50; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19739071 19739104 . + . Name=Simple_repeat;Target=(CTTTT)n 1 35; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19739071 19739105 . + . Name=Simple_repeat;Target=(T)n 1 35; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19739072 19739105 . + . Name=Simple_repeat;Target=(T)n 1 34; GhWOX4a_Dt upstream D01 RepeatMasker similarity 19740245 19740269 . + . Name=Simple_repeat;Target=(GAT)n 1 24; GhWOX4a_Dt gene_region D01 RepeatMasker similarity 19743511 19743566 . + . Name=Simple_repeat;Target=(TCATT)n 1 55; GhWOX4a_Dt downstream D01 RepeatMasker similarity 19746339 19746369 . + . Name=Simple_repeat;Target=(GAAG)n 1 30; GhWOX4a_Dt downstream D01 RepeatMasker similarity 19747086 19748165 . + . Name=LTR/Gypsy;Target=Gypsy-4_ALY-I 2616 4111; GhWOX4a_Dt downstream D01 RepeatMasker similarity 19749109 19749812 . + . Name=LTR/Gypsy;Target=Gypsy-4_ALY-I 4672 5236; GhWOX4a_Dt downstream D08 RepeatMasker similarity 3374306 3374339 . + . Name=Simple_repeat;Target=(T)n 1 34; GhWOX14_Dt downstream D08 RepeatMasker similarity 3375161 3375196 . + . Name=Simple_repeat;Target=(TAAATA)n 1 36; GhWOX14_Dt downstream D08 RepeatMasker similarity 3375512 3375884 . - . Name=Unspecified;Target=rnd-2_family-188 1 375; GhWOX14_Dt downstream D08 RepeatMasker similarity 3376171 3376197 . + . Name=Simple_repeat;Target=(ACAT)n 1 27; GhWOX14_Dt downstream D08 RepeatMasker similarity 3380690 3380732 . + . Name=Simple_repeat;Target=(GAAAA)n 1 43; GhWOX14_Dt gene_region D08 RepeatMasker similarity 3382624 3382648 . + . Name=Simple_repeat;Target=(AT)n 1 25; GhWOX14_Dt upstream D08 RepeatMasker similarity 3385481 3385556 . + . Name=Simple_repeat;Target=(ATTTA)n 1 74; GhWOX14_Dt upstream D08 RepeatMasker similarity 3386571 3386655 . + . Name=Simple_repeat;Target=(AAAAATT)n 1 78; GhWOX14_Dt upstream D08 RepeatMasker similarity 3389615 3389671 . + . Name=Simple_repeat;Target=(CAAAAACT)n 1 58; GhWOX14_Dt upstream D08 RepeatMasker similarity 3390255 3390292 . + . Name=Simple_repeat;Target=(T)n 1 38; GhWOX14_Dt upstream D13 RepeatMasker similarity 51582232 51582288 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 61; GhWOX11_Dt downstream D13 RepeatMasker similarity 51586942 51586978 . + . Name=Simple_repeat;Target=(ATTTAT)n 1 38; GhWOX11_Dt upstream D13 RepeatMasker similarity 51588159 51588181 . + . Name=Low_complexity;Target=A-rich 1 73; GhWOX11_Dt upstream D13 RepeatMasker similarity 51588159 51588234 . + . Name=Simple_repeat;Target=(AAATTCT)n 1 75; GhWOX11_Dt upstream D13 RepeatMasker similarity 51588182 51588232 . + . Name=Simple_repeat;Target=(AGACTAA)n 1 50; GhWOX11_Dt upstream D13 RepeatMasker similarity 51588862 51588911 . + . Name=Simple_repeat;Target=(TTAAT)n 1 49; GhWOX11_Dt upstream D13 RepeatMasker similarity 51589492 51589515 . + . Name=Simple_repeat;Target=(A)n 1 24; GhWOX11_Dt upstream D13 RepeatMasker similarity 51594598 51594632 . - . Name=Unspecified;Target=rnd-2_family-20 96 130; GhWOX11_Dt upstream D13 RepeatMasker similarity 51595485 51595619 . - . Name=Unspecified;Target=rnd-2_family-9 1858 1985; GhWOX11_Dt upstream A03 RepeatMasker similarity 5068498 5068581 . + . Name=Simple_repeat;Target=(TCATC)n 1 76; GhWOX3b_At upstream A03 RepeatMasker similarity 5069717 5069822 . + . Name=Simple_repeat;Target=(TCTT)n 1 104; GhWOX3b_At upstream A03 RepeatMasker similarity 5069797 5069911 . + . Name=Simple_repeat;Target=(TTATATA)n 1 115; GhWOX3b_At upstream A03 RepeatMasker similarity 5071293 5071325 . + . Name=Simple_repeat;Target=(TAACAA)n 1 32; GhWOX3b_At upstream A03 RepeatMasker similarity 5073409 5073475 . + . Name=Simple_repeat;Target=(AT)n 1 68; GhWOX3b_At upstream A03 RepeatMasker similarity 5073631 5073663 . + . Name=Simple_repeat;Target=(ATAAA)n 1 33; GhWOX3b_At upstream A03 RepeatMasker similarity 5074201 5074243 . + . Name=Simple_repeat;Target=(AATAA)n 1 44; GhWOX3b_At upstream A03 RepeatMasker similarity 5074453 5074490 . + . Name=Simple_repeat;Target=(AATTTTC)n 1 38; GhWOX3b_At upstream A03 RepeatMasker similarity 5075168 5075194 . + . Name=Simple_repeat;Target=(ATAA)n 1 28; GhWOX3b_At upstream A03 RepeatMasker similarity 5075446 5075480 . + . Name=Simple_repeat;Target=(AATT)n 1 38; GhWOX3b_At upstream A03 RepeatMasker similarity 5076194 5076218 . + . Name=Simple_repeat;Target=(TTAA)n 1 24; GhWOX3b_At upstream A03 RepeatMasker similarity 5077642 5077666 . + . Name=Simple_repeat;Target=(TATT)n 1 25; GhWOX3b_At gene_region A03 RepeatMasker similarity 5077765 5077816 . + . Name=Simple_repeat;Target=(AT)n 1 53; GhWOX3b_At gene_region A03 RepeatMasker similarity 5078305 5078331 . + . Name=Simple_repeat;Target=(CAC)n 1 25; GhWOX3b_At gene_region A03 RepeatMasker similarity 5078768 5078796 . + . Name=Simple_repeat;Target=(T)n 1 29; GhWOX3b_At downstream A03 RepeatMasker similarity 5079416 5079443 . + . Name=Simple_repeat;Target=(TTATA)n 1 30; GhWOX3b_At downstream A03 RepeatMasker similarity 5079833 5079854 . + . Name=Simple_repeat;Target=(AT)n 1 24; GhWOX3b_At downstream A03 RepeatMasker similarity 5081319 5081380 . + . Name=Simple_repeat;Target=(AATTT)n 1 62; GhWOX3b_At downstream A03 RepeatMasker similarity 5083744 5083869 . + . Name=LTR/Caulimovirus;Target=Caulimovirus-1_ALy 3981 4105; GhWOX3b_At downstream A03 RepeatMasker similarity 5083816 5083965 . + . Name=LTR/Gypsy;Target=Gypsy-26_ALY-I 2261 2413; GhWOX3b_At downstream A03 RepeatMasker similarity 5085850 5085866 . + . Name=Simple_repeat;Target=(GT)n 1 17; GhWOX3b_At downstream A03 RepeatMasker similarity 5087848 5087949 . + . Name=Unspecified;Target=rnd-2_family-20 60 160; GhWOX3b_At downstream A08 RepeatMasker similarity 2678582 2679846 . - . Name=LTR/Gypsy;Target=Gypsy-23_ALY-I 2080 3344; GhWOX14_At downstream A08 RepeatMasker similarity 2680711 2681128 . - . Name=Unspecified;Target=rnd-2_family-20 1006 1424; GhWOX14_At downstream A08 RepeatMasker similarity 2681548 2681590 . - . Name=Unspecified;Target=rnd-2_family-20 94 135; GhWOX14_At downstream A08 RepeatMasker similarity 2682871 2682952 . + . Name=Simple_repeat;Target=(ATAATTT)n 1 79; GhWOX14_At downstream A08 RepeatMasker similarity 2682956 2683232 . - . Name=Unspecified;Target=rnd-2_family-20 6366 6642; GhWOX14_At downstream A08 RepeatMasker similarity 2683386 2683500 . - . Name=Unspecified;Target=rnd-2_family-20 6278 6392; GhWOX14_At downstream A08 RepeatMasker similarity 2684214 2684314 . + . Name=Unspecified;Target=rnd-2_family-20 8383 8482; GhWOX14_At downstream A08 RepeatMasker similarity 2684385 2684538 . + . Name=Unspecified;Target=rnd-2_family-20 8399 8547; GhWOX14_At downstream A08 RepeatMasker similarity 2690348 2690366 . + . Name=Simple_repeat;Target=(AT)n 1 19; GhWOX14_At upstream A08 RepeatMasker similarity 2694929 2695010 . + . Name=Simple_repeat;Target=(ATTAAAA)n 1 79; GhWOX14_At upstream A08 RepeatMasker similarity 2698717 2698755 . + . Name=Simple_repeat;Target=(T)n 1 39; GhWOX14_At upstream A02 RepeatMasker similarity 22047908 22048077 . + . Name=Unspecified;Target=rnd-2_family-20 8386 8547; GhWOX4_At upstream A02 RepeatMasker similarity 22050765 22050806 . + . Name=Simple_repeat;Target=(TTTTC)n 1 43; GhWOX4_At upstream A02 RepeatMasker similarity 22052446 22053191 . + . Name=LTR/Copia;Target=Copia-64_ALY-I 1699 2334; GhWOX4_At upstream A02 RepeatMasker similarity 22053459 22055042 . + . Name=LTR/Copia;Target=Copia-64_ALY-I 2641 4477; GhWOX4_At upstream A02 RepeatMasker similarity 22053862 22054012 . - . Name=Unspecified;Target=rnd-2_family-14 1487 1631; GhWOX4_At upstream A02 RepeatMasker similarity 22057697 22057788 . + . Name=Simple_repeat;Target=(ATTA)n 1 87; GhWOX4_At downstream A02 RepeatMasker similarity 22059589 22060443 . - . Name=Unspecified;Target=rnd-2_family-330 7674 8524; GhWOX4_At downstream A02 RepeatMasker similarity 22060283 22060325 . + . Name=Simple_repeat;Target=(CTTATTT)n 1 42; GhWOX4_At downstream A02 RepeatMasker similarity 22063109 22063289 . + . Name=Unspecified;Target=rnd-2_family-20 8377 8547; GhWOX4_At downstream A02 RepeatMasker similarity 22063291 22063743 . - . Name=Unspecified;Target=rnd-2_family-330 7232 7676; GhWOX4_At downstream A02 RepeatMasker similarity 22063798 22063879 . + . Name=Simple_repeat;Target=(TTATTT)n 1 79; GhWOX4_At downstream A02 RepeatMasker similarity 22064307 22064581 . + . Name=LTR/Gypsy;Target=Gypsy-5_ALY-I 497 771; GhWOX4_At downstream A02 RepeatMasker similarity 22065667 22066026 . + . Name=LTR/Gypsy;Target=Gypsy-5_ALY-I 1994 2459; GhWOX4_At downstream A02 RepeatMasker similarity 22066780 22066932 . - . Name=Unspecified;Target=rnd-2_family-330 3808 3955; GhWOX4_At downstream A05 RepeatMasker similarity 8490065 8490110 . + . Name=Simple_repeat;Target=(TCTT)n 1 44; GhWOX3a_At downstream A05 RepeatMasker similarity 8490481 8490511 . + . Name=Simple_repeat;Target=(AAG)n 1 31; GhWOX3a_At downstream A05 RepeatMasker similarity 8495231 8495286 . + . Name=LTR/Copia;Target=ATCopia24I 2746 2798; GhWOX3a_At downstream A05 RepeatMasker similarity 8495231 8495282 . + . Name=Simple_repeat;Target=(ATC)n 1 52; GhWOX3a_At downstream A05 RepeatMasker similarity 8495899 8495920 . + . Name=Simple_repeat;Target=(AGAA)n 1 22; GhWOX3a_At downstream A05 RepeatMasker similarity 8496599 8496626 . + . Name=Simple_repeat;Target=(CT)n 1 28; GhWOX3a_At downstream A05 RepeatMasker similarity 8496907 8496929 . + . Name=Simple_repeat;Target=(AAT)n 1 24; GhWOX3a_At downstream A05 RepeatMasker similarity 8497207 8497240 . + . Name=Simple_repeat;Target=(GAATTG)n 1 33; GhWOX3a_At downstream A05 RepeatMasker similarity 8497510 8497532 . + . Name=Simple_repeat;Target=(TTTA)n 1 23; GhWOX3a_At downstream A05 RepeatMasker similarity 8497616 8497649 . + . Name=Simple_repeat;Target=(GTT)n 1 34; GhWOX3a_At gene_region A05 RepeatMasker similarity 8498682 8498721 . + . Name=Simple_repeat;Target=(GTTGAA)n 1 40; GhWOX3a_At gene_region A05 RepeatMasker similarity 8499138 8499162 . + . Name=Simple_repeat;Target=(GA)n 1 25; GhWOX3a_At upstream A05 RepeatMasker similarity 8500345 8500400 . + . Name=Simple_repeat;Target=(GATATA)n 1 56; GhWOX3a_At upstream A05 RepeatMasker similarity 8501662 8501715 . + . Name=Simple_repeat;Target=(TA)n 1 57; GhWOX3a_At upstream A05 RepeatMasker similarity 8502491 8502616 . + . Name=Simple_repeat;Target=(CGAAT)n 4 120; GhWOX3a_At upstream A05 RepeatMasker similarity 8502570 8502616 . + . Name=Simple_repeat;Target=(TCGAA)n 1 46; GhWOX3a_At upstream A05 RepeatMasker similarity 8504321 8504351 . + . Name=Simple_repeat;Target=(AATGC)n 1 31; GhWOX3a_At upstream A05 RepeatMasker similarity 8504614 8504638 . + . Name=Simple_repeat;Target=(ATAG)n 1 25; GhWOX3a_At upstream A05 RepeatMasker similarity 8506686 8506749 . + . Name=Simple_repeat;Target=(AAAATAT)n 1 65; GhWOX3a_At upstream A05 RepeatMasker similarity 8507409 8507515 . + . Name=Simple_repeat;Target=(AATTG)n 1 108; GhWOX3a_At upstream A05 RepeatMasker similarity 8507844 8507943 . + . Name=Simple_repeat;Target=(ATT)n 1 101; GhWOX3a_At upstream A05 RepeatMasker similarity 8508072 8508133 . + . Name=Simple_repeat;Target=(AATA)n 1 65; GhWOX3a_At upstream A10 RepeatMasker similarity 19125976 19126089 . + . Name=Simple_repeat;Target=(TGTTTT)n 1 109; GhWUS1b_At upstream A10 RepeatMasker similarity 19126221 19126360 . + . Name=Unspecified;Target=rnd-2_family-9 1012 1150; GhWUS1b_At upstream A10 RepeatMasker similarity 19127430 19127474 . + . Name=Simple_repeat;Target=(TGATATG)n 1 45; GhWUS1b_At upstream A10 RepeatMasker similarity 19129705 19129725 . + . Name=Simple_repeat;Target=(TC)n 1 21; GhWUS1b_At upstream A10 RepeatMasker similarity 19131435 19131458 . + . Name=Simple_repeat;Target=(AAAT)n 1 26; GhWUS1b_At upstream A10 RepeatMasker similarity 19131597 19131648 . + . Name=Simple_repeat;Target=(TTCTTT)n 1 50; GhWUS1b_At upstream A10 RepeatMasker similarity 19133721 19133769 . + . Name=Simple_repeat;Target=(TATT)n 1 48; GhWUS1b_At upstream A10 RepeatMasker similarity 19135351 19135383 . + . Name=Simple_repeat;Target=(ATATT)n 1 32; GhWUS1b_At upstream A10 RepeatMasker similarity 19136535 19136578 . + . Name=Simple_repeat;Target=(AGA)n 1 44; GhWUS1b_At gene_region A10 RepeatMasker similarity 19138121 19138949 . - . Name=Unspecified;Target=rnd-2_family-9 2006 2812; GhWUS1b_At downstream A10 RepeatMasker similarity 19138775 19138802 . + . Name=Simple_repeat;Target=(TTAT)n 1 27; GhWUS1b_At downstream A10 RepeatMasker similarity 19139171 19139261 . + . Name=Simple_repeat;Target=(AATA)n 1 89; GhWUS1b_At downstream A10 RepeatMasker similarity 19139456 19139691 . + . Name=Unspecified;Target=rnd-2_family-106 529 762; GhWUS1b_At downstream A10 RepeatMasker similarity 19143224 19143259 . + . Name=Simple_repeat;Target=(TTTATT)n 1 35; GhWUS1b_At downstream A10 RepeatMasker similarity 19144939 19144961 . + . Name=Simple_repeat;Target=(T)n 1 23; GhWUS1b_At downstream A10 RepeatMasker similarity 19145888 19145918 . + . Name=Simple_repeat;Target=(T)n 1 31; GhWUS1b_At downstream A10 RepeatMasker similarity 19145889 19145917 . + . Name=Simple_repeat;Target=(TTTTA)n 1 29; GhWUS1b_At downstream A10 RepeatMasker similarity 99621592 99621631 . + . Name=Simple_repeat;Target=(AT)n 1 42; GhWOX5_At downstream A10 RepeatMasker similarity 99621676 99621710 . + . Name=Simple_repeat;Target=(AAT)n 1 35; GhWOX5_At downstream A10 RepeatMasker similarity 99621985 99622014 . + . Name=Simple_repeat;Target=(TAAAA)n 1 29; GhWOX5_At downstream A10 RepeatMasker similarity 99624713 99624759 . + . Name=Simple_repeat;Target=(TA)n 1 48; GhWOX5_At downstream A10 RepeatMasker similarity 99624877 99624929 . + . Name=Simple_repeat;Target=(ATTTTC)n 1 54; GhWOX5_At downstream A10 RepeatMasker similarity 99627729 99627753 . + . Name=Simple_repeat;Target=(ATATA)n 1 26; GhWOX5_At downstream A10 RepeatMasker similarity 99628660 99628673 . + . Name=Simple_repeat;Target=(AATTAT)n 1 62; GhWOX5_At downstream A10 RepeatMasker similarity 99628660 99628721 . + . Name=Simple_repeat;Target=(AATTAT)n 1 64; GhWOX5_At downstream A10 RepeatMasker similarity 99628674 99628719 . + . Name=Simple_repeat;Target=(TA)n 1 49; GhWOX5_At downstream A10 RepeatMasker similarity 99629323 99629385 . + . Name=Simple_repeat;Target=(TA)n 1 66; GhWOX5_At downstream A10 RepeatMasker similarity 99632476 99632500 . + . Name=Simple_repeat;Target=(AAG)n 1 26; GhWOX5_At gene_region A10 RepeatMasker similarity 99632977 99633000 . + . Name=Simple_repeat;Target=(TA)n 1 25; GhWOX5_At upstream A10 RepeatMasker similarity 99634357 99634644 . + . Name=Unspecified;Target=rnd-2_family-188 85 375; GhWOX5_At upstream A10 RepeatMasker similarity 99635043 99635078 . + . Name=Simple_repeat;Target=(ATACAT)n 1 38; GhWOX5_At upstream A10 RepeatMasker similarity 99636949 99636984 . + . Name=Simple_repeat;Target=(TAAAATT)n 1 36; GhWOX5_At upstream A10 RepeatMasker similarity 99637005 99637059 . + . Name=Simple_repeat;Target=(ATATTTG)n 1 58; GhWOX5_At upstream A10 RepeatMasker similarity 99637110 99637189 . + . Name=Simple_repeat;Target=(TAAATTT)n 1 83; GhWOX5_At upstream A10 RepeatMasker similarity 99637401 99637451 . + . Name=Simple_repeat;Target=(ATATA)n 1 51; GhWOX5_At upstream A10 RepeatMasker similarity 99637763 99637794 . + . Name=Simple_repeat;Target=(CCTAAA)n 1 32; GhWOX5_At upstream A10 RepeatMasker similarity 99641043 99641418 . + . Name=Unspecified;Target=rnd-2_family-188 1 375; GhWOX5_At upstream A13 RepeatMasker similarity 70922835 70924138 . - . Name=Unspecified;Target=rnd-2_family-330 7215 8542; GhWOX11_At downstream A13 RepeatMasker similarity 70926301 70926341 . + . Name=Simple_repeat;Target=(TTTAG)n 1 40; GhWOX11_At downstream A13 RepeatMasker similarity 70928284 70928317 . + . Name=Simple_repeat;Target=(TTGTT)n 1 33; GhWOX11_At downstream A13 RepeatMasker similarity 70930145 70930203 . + . Name=Simple_repeat;Target=(TTAAATA)n 1 56; GhWOX11_At gene_region A13 RepeatMasker similarity 70931204 70931232 . + . Name=Simple_repeat;Target=(A)n 1 29; GhWOX11_At upstream A13 RepeatMasker similarity 70931681 70931729 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 48; GhWOX11_At upstream A13 RepeatMasker similarity 70932547 70932563 . + . Name=Simple_repeat;Target=(TC)n 1 17; GhWOX11_At upstream A13 RepeatMasker similarity 70933129 70933165 . + . Name=Simple_repeat;Target=(ATTTAT)n 1 38; GhWOX11_At upstream A13 RepeatMasker similarity 70933938 70933980 . + . Name=Simple_repeat;Target=(TTAATA)n 1 44; GhWOX11_At upstream A13 RepeatMasker similarity 70934336 70934430 . + . Name=Simple_repeat;Target=(TTTTAAA)n 1 94; GhWOX11_At upstream A13 RepeatMasker similarity 70934448 70934516 . + . Name=Simple_repeat;Target=(TTTTA)n 1 69; GhWOX11_At upstream A13 RepeatMasker similarity 70935335 70935383 . + . Name=Simple_repeat;Target=(ATATTTA)n 1 48; GhWOX11_At upstream A13 RepeatMasker similarity 70935335 70935382 . + . Name=Simple_repeat;Target=(ATATT)n 1 50; GhWOX11_At upstream A13 RepeatMasker similarity 70935336 70935389 . + . Name=Simple_repeat;Target=(TAT)n 1 56; GhWOX11_At upstream A13 RepeatMasker similarity 70935383 70935389 . + . Name=Simple_repeat;Target=(ATATTTA)n 1 53; GhWOX11_At upstream A13 RepeatMasker similarity 70935655 70935717 . + . Name=Simple_repeat;Target=(ATTTTA)n 1 62; GhWOX11_At upstream A13 RepeatMasker similarity 70936857 70936885 . + . Name=Simple_repeat;Target=(AT)n 1 29; GhWOX11_At upstream D03 RepeatMasker similarity 120652 120680 . + . Name=Simple_repeat;Target=(TC)n 1 29; GhWOX13b_Dt downstream D03 RepeatMasker similarity 125032 125066 . + . Name=Simple_repeat;Target=(ACTTTT)n 1 34; GhWOX13b_Dt downstream D03 RepeatMasker similarity 127447 127485 . + . Name=Simple_repeat;Target=(AACAA)n 1 39; GhWOX13b_Dt downstream D03 RepeatMasker similarity 128590 128654 . + . Name=Simple_repeat;Target=(TTTC)n 1 71; GhWOX13b_Dt downstream D03 RepeatMasker similarity 128655 128686 . + . Name=Simple_repeat;Target=(TTTAT)n 1 34; GhWOX13b_Dt downstream D03 RepeatMasker similarity 129179 129217 . + . Name=Simple_repeat;Target=(AAAACA)n 1 40; GhWOX13b_Dt downstream D03 RepeatMasker similarity 131962 132004 . + . Name=Simple_repeat;Target=(ATTAAAT)n 1 44; GhWOX13b_Dt upstream D03 RepeatMasker similarity 133411 133783 . + . Name=Unspecified;Target=rnd-2_family-188 1 375; GhWOX13b_Dt upstream D03 RepeatMasker similarity 139194 139227 . + . Name=Simple_repeat;Target=(ATAATG)n 1 33; GhWOX13b_Dt upstream D03 RepeatMasker similarity 139194 139204 . + . Name=Simple_repeat;Target=(ATAATG)n 1 30; GhWOX13b_Dt upstream D03 RepeatMasker similarity 139205 139224 . + . Name=Simple_repeat;Target=(TGA)n 1 20; GhWOX13b_Dt upstream D03 RepeatMasker similarity 140726 140781 . + . Name=Simple_repeat;Target=(AAATTTT)n 1 54; GhWOX13b_Dt upstream A12 RepeatMasker similarity 86759061 86759094 . + . Name=Simple_repeat;Target=(TTT)n 1 34; GhWOX1_At downstream A12 RepeatMasker similarity 86761246 86761288 . + . Name=Simple_repeat;Target=(TAAATT)n 1 42; GhWOX1_At downstream A12 RepeatMasker similarity 86761347 86761391 . + . Name=Simple_repeat;Target=(ATTTTT)n 1 42; GhWOX1_At downstream A12 RepeatMasker similarity 86761503 86761536 . + . Name=Simple_repeat;Target=(AAAT)n 1 35; GhWOX1_At downstream A12 RepeatMasker similarity 86763993 86764031 . + . Name=Simple_repeat;Target=(ATA)n 1 39; GhWOX1_At downstream A12 RepeatMasker similarity 86764055 86764097 . + . Name=Simple_repeat;Target=(AACATT)n 1 44; GhWOX1_At downstream A12 RepeatMasker similarity 86768484 86768581 . + . Name=Simple_repeat;Target=(AAATTTA)n 1 93; GhWOX1_At downstream A12 RepeatMasker similarity 86769430 86769467 . + . Name=Simple_repeat;Target=(TAA)n 1 39; GhWOX1_At gene_region A12 RepeatMasker similarity 86770068 86770106 . + . Name=Simple_repeat;Target=(TA)n 1 41; GhWOX1_At gene_region A12 RepeatMasker similarity 86770244 86770552 . + . Name=Unspecified;Target=rnd-2_family-188 22 375; GhWOX1_At gene_region A12 RepeatMasker similarity 86770609 86770640 . + . Name=Simple_repeat;Target=(GAAA)n 1 32; GhWOX1_At gene_region A12 RepeatMasker similarity 86770625 86770654 . + . Name=Simple_repeat;Target=(AAAGG)n 1 31; GhWOX1_At gene_region A12 RepeatMasker similarity 86770751 86770783 . + . Name=Simple_repeat;Target=(A)n 1 33; GhWOX1_At gene_region A12 RepeatMasker similarity 86770896 86770927 . + . Name=Simple_repeat;Target=(T)n 1 32; GhWOX1_At gene_region A12 RepeatMasker similarity 86771779 86771836 . + . Name=Simple_repeat;Target=(AAGAA)n 1 58; GhWOX1_At upstream A12 RepeatMasker similarity 86771812 86771874 . + . Name=Simple_repeat;Target=(GGAAGG)n 1 59; GhWOX1_At upstream A12 RepeatMasker similarity 86772104 86772181 . + . Name=Simple_repeat;Target=(CATG)n 2 68; GhWOX1_At upstream A12 RepeatMasker similarity 86772153 86772177 . + . Name=Simple_repeat;Target=(TACA)n 1 25; GhWOX1_At upstream A12 RepeatMasker similarity 86773288 86773333 . + . Name=Simple_repeat;Target=(ATTAATA)n 1 47; GhWOX1_At upstream A12 RepeatMasker similarity 86773560 86773595 . + . Name=Simple_repeat;Target=(T)n 1 36; GhWOX1_At upstream A12 RepeatMasker similarity 86774049 86774130 . + . Name=Unspecified;Target=rnd-2_family-188 291 374; GhWOX1_At upstream A12 RepeatMasker similarity 86775435 86775496 . + . Name=Simple_repeat;Target=(ATTAAA)n 1 60; GhWOX1_At upstream A12 RepeatMasker similarity 86776071 86776168 . - . Name=Unspecified;Target=rnd-2_family-20 8384 8478; GhWOX1_At upstream A12 RepeatMasker similarity 86776853 86776998 . + . Name=Unspecified;Target=rnd-2_family-20 6247 6393; GhWOX1_At upstream A12 RepeatMasker similarity 86777080 86777424 . + . Name=Unspecified;Target=rnd-2_family-20 6295 6639; GhWOX1_At upstream A12 RepeatMasker similarity 86777762 86777837 . + . Name=Simple_repeat;Target=(AGTGACA)n 1 74; GhWOX1_At upstream A12 RepeatMasker similarity 86778454 86778485 . + . Name=Simple_repeat;Target=(ATTGG)n 1 35; GhWOX1_At upstream A12 RepeatMasker similarity 86779118 86779184 . + . Name=Simple_repeat;Target=(ATTAAAA)n 1 62; GhWOX1_At upstream A12 RepeatMasker similarity 86779403 86779440 . + . Name=Simple_repeat;Target=(TTAA)n 1 38; GhWOX1_At upstream A12 RepeatMasker similarity 86779463 86779531 . + . Name=Simple_repeat;Target=(AATTTAT)n 1 71; GhWOX1_At upstream D11 RepeatMasker similarity 61815216 61815237 . + . Name=Simple_repeat;Target=(ATTT)n 1 23; GhWOX12_Dt upstream D11 RepeatMasker similarity 61817395 61817431 . + . Name=Simple_repeat;Target=(ATTTT)n 1 36; GhWOX12_Dt upstream D11 RepeatMasker similarity 61817969 61818032 . + . Name=Simple_repeat;Target=(AATTTT)n 1 63; GhWOX12_Dt upstream D11 RepeatMasker similarity 61820563 61820623 . + . Name=Simple_repeat;Target=(ATAA)n 1 58; GhWOX12_Dt upstream D11 RepeatMasker similarity 61821613 61821638 . + . Name=Simple_repeat;Target=(ATA)n 1 24; GhWOX12_Dt upstream D11 RepeatMasker similarity 61821896 61821946 . + . Name=Simple_repeat;Target=(ATTTATAA)n 1 53; GhWOX12_Dt upstream D11 RepeatMasker similarity 61823215 61823236 . + . Name=Simple_repeat;Target=(T)n 1 22; GhWOX12_Dt gene_region D11 RepeatMasker similarity 61825404 61825428 . + . Name=Simple_repeat;Target=(TAA)n 1 24; GhWOX12_Dt downstream D11 RepeatMasker similarity 61825605 61825673 . + . Name=Low_complexity;Target=A-rich 1 72; GhWOX12_Dt downstream D11 RepeatMasker similarity 61825605 61825637 . + . Name=Simple_repeat;Target=(AAAAT)n 1 33; GhWOX12_Dt downstream D11 RepeatMasker similarity 61825614 61825673 . + . Name=Simple_repeat;Target=(AAAATG)n 1 64; GhWOX12_Dt downstream D11 RepeatMasker similarity 61825869 61825910 . + . Name=Simple_repeat;Target=(TTTAT)n 1 42; GhWOX12_Dt downstream D11 RepeatMasker similarity 61827600 61827662 . + . Name=Simple_repeat;Target=(TTTACTT)n 1 63; GhWOX12_Dt downstream D11 RepeatMasker similarity 61828863 61828893 . + . Name=Simple_repeat;Target=(TCT)n 1 32; GhWOX12_Dt downstream D11 RepeatMasker similarity 61830271 61830292 . + . Name=Simple_repeat;Target=(TA)n 1 23; GhWOX12_Dt downstream D11 RepeatMasker similarity 61830469 61830508 . + . Name=Simple_repeat;Target=(TTTAA)n 1 39; GhWOX12_Dt downstream D11 RepeatMasker similarity 61830666 61830710 . + . Name=Simple_repeat;Target=(TATATA)n 1 47; GhWOX12_Dt downstream D11 RepeatMasker similarity 61833174 61833209 . + . Name=Simple_repeat;Target=(TA)n 1 37; GhWOX12_Dt downstream A13 RepeatMasker similarity 79341458 79341490 . + . Name=Simple_repeat;Target=(TTAAA)n 1 35; GhWOX2b_At downstream A13 RepeatMasker similarity 79345060 79345100 . + . Name=Simple_repeat;Target=(AAAAG)n 1 43; GhWOX2b_At downstream A13 RepeatMasker similarity 79345275 79345320 . + . Name=Simple_repeat;Target=(GAAAA)n 1 46; GhWOX2b_At downstream A13 RepeatMasker similarity 79345560 79345610 . + . Name=Simple_repeat;Target=(TTTTA)n 1 53; GhWOX2b_At downstream A13 RepeatMasker similarity 79347199 79347265 . + . Name=Simple_repeat;Target=(AAAATTT)n 1 67; GhWOX2b_At downstream A13 RepeatMasker similarity 79350752 79350820 . + . Name=Simple_repeat;Target=(ATAAATT)n 1 72; GhWOX2b_At upstream A13 RepeatMasker similarity 79351734 79351761 . + . Name=Simple_repeat;Target=(ATAA)n 1 28; GhWOX2b_At upstream A13 RepeatMasker similarity 79353520 79353577 . + . Name=Simple_repeat;Target=(ATTAA)n 1 56; GhWOX2b_At upstream A13 RepeatMasker similarity 79356353 79356474 . - . Name=Unspecified;Target=rnd-2_family-188 25 146; GhWOX2b_At upstream A13 RepeatMasker similarity 79357175 79357218 . + . Name=Simple_repeat;Target=(TTTTGAA)n 1 43; GhWOX2b_At upstream A13 RepeatMasker similarity 79357670 79357742 . + . Name=Simple_repeat;Target=(AATA)n 1 71; GhWOX2b_At upstream D10 RepeatMasker similarity 2321468 2321489 . + . Name=Simple_repeat;Target=(A)n 1 22; GhWOX8_Dt downstream D10 RepeatMasker similarity 2321826 2321881 . + . Name=Simple_repeat;Target=(TTTTC)n 1 51; GhWOX8_Dt downstream D10 RepeatMasker similarity 2321826 2321877 . + . Name=Simple_repeat;Target=(TTTTC)n 1 48; GhWOX8_Dt downstream D10 RepeatMasker similarity 2321844 2321881 . + . Name=Simple_repeat;Target=(TTC)n 1 39; GhWOX8_Dt downstream D10 RepeatMasker similarity 2322097 2322129 . + . Name=Simple_repeat;Target=(ATTTTT)n 1 31; GhWOX8_Dt downstream D10 RepeatMasker similarity 2324235 2324274 . + . Name=Simple_repeat;Target=(TAA)n 1 41; GhWOX8_Dt downstream D10 RepeatMasker similarity 2326059 2326147 . + . Name=Simple_repeat;Target=(AATAA)n 1 90; GhWOX8_Dt downstream D10 RepeatMasker similarity 2328493 2328520 . + . Name=Simple_repeat;Target=(ATT)n 1 27; GhWOX8_Dt downstream D10 RepeatMasker similarity 2328510 2328553 . + . Name=Simple_repeat;Target=(TTAAT)n 1 45; GhWOX8_Dt downstream D10 RepeatMasker similarity 2329071 2329103 . + . Name=Simple_repeat;Target=(TA)n 1 32; GhWOX8_Dt downstream D10 RepeatMasker similarity 2332004 2332067 . + . Name=Unspecified;Target=rnd-2_family-188 129 195; GhWOX8_Dt upstream D10 RepeatMasker similarity 2332841 2332875 . + . Name=Simple_repeat;Target=(TA)n 1 37; GhWOX8_Dt upstream D10 RepeatMasker similarity 2333768 2333812 . + . Name=Simple_repeat;Target=(AAAG)n 1 47; GhWOX8_Dt upstream D10 RepeatMasker similarity 2334429 2334472 . + . Name=Simple_repeat;Target=(TTAAAA)n 1 42; GhWOX8_Dt upstream D10 RepeatMasker similarity 2337044 2337100 . + . Name=Simple_repeat;Target=(TTA)n 1 56; GhWOX8_Dt upstream D10 RepeatMasker similarity 2337294 2337335 . + . Name=Simple_repeat;Target=(ATTT)n 1 44; GhWOX8_Dt upstream D10 RepeatMasker similarity 2338106 2338145 . + . Name=Simple_repeat;Target=(ATAAATT)n 1 40; GhWOX8_Dt upstream D10 RepeatMasker similarity 2339352 2339368 . + . Name=Simple_repeat;Target=(T)n 1 17; GhWOX8_Dt upstream D10 RepeatMasker similarity 2339929 2340231 . + . Name=Unspecified;Target=rnd-2_family-188 31 346; GhWOX8_Dt upstream D10 RepeatMasker similarity 2340267 2340295 . + . Name=Simple_repeat;Target=(A)n 1 29; GhWOX8_Dt upstream D05 RepeatMasker similarity 13525277 13525334 . + . Name=Simple_repeat;Target=(AATC)n 1 55; GhWOX9_Dt upstream D05 RepeatMasker similarity 13525277 13525345 . + . Name=Simple_repeat;Target=(ATTCA)n 1 69; GhWOX9_Dt upstream D05 RepeatMasker similarity 13525289 13525345 . + . Name=Simple_repeat;Target=(ATTCA)n 1 57; GhWOX9_Dt upstream D05 RepeatMasker similarity 13529135 13529171 . + . Name=Simple_repeat;Target=(AATTCGAAT)n 1 37; GhWOX9_Dt upstream D05 RepeatMasker similarity 13529908 13529969 . + . Name=Simple_repeat;Target=(ATAA)n 1 62; GhWOX9_Dt upstream D05 RepeatMasker similarity 13530087 13530217 . + . Name=Simple_repeat;Target=(ATTCG)n 4 125; GhWOX9_Dt upstream D05 RepeatMasker similarity 13531553 13531590 . + . Name=Simple_repeat;Target=(ATAATTA)n 1 39; GhWOX9_Dt upstream D05 RepeatMasker similarity 13533451 13533483 . + . Name=Simple_repeat;Target=(AAAAAT)n 1 33; GhWOX9_Dt upstream D05 RepeatMasker similarity 13533787 13533832 . + . Name=Simple_repeat;Target=(CAAAAAA)n 1 47; GhWOX9_Dt upstream D05 RepeatMasker similarity 13534139 13534168 . + . Name=Simple_repeat;Target=(CT)n 1 30; GhWOX9_Dt upstream D05 RepeatMasker similarity 13534481 13534517 . + . Name=Simple_repeat;Target=(TTTAT)n 1 37; GhWOX9_Dt upstream D05 RepeatMasker similarity 13539280 13539314 . + . Name=Simple_repeat;Target=(TTATTT)n 1 33; GhWOX9_Dt downstream D05 RepeatMasker similarity 13544331 13544382 . + . Name=Simple_repeat;Target=(CTCTTTA)n 1 55; GhWOX9_Dt downstream D05 RepeatMasker similarity 13544364 13544436 . + . Name=Simple_repeat;Target=(ATTTTTT)n 1 73; GhWOX9_Dt downstream D05 RepeatMasker similarity 13544511 13544569 . + . Name=Simple_repeat;Target=(ATTTA)n 1 56; GhWOX9_Dt downstream A10 RepeatMasker similarity 2369211 2369247 . + . Name=Simple_repeat;Target=(TATATGT)n 1 38; GhWOX8_At downstream A10 RepeatMasker similarity 2370997 2371055 . + . Name=Simple_repeat;Target=(AACAAA)n 1 60; GhWOX8_At downstream A10 RepeatMasker similarity 2371361 2371416 . + . Name=Simple_repeat;Target=(TTTTC)n 1 51; GhWOX8_At downstream A10 RepeatMasker similarity 2371361 2371412 . + . Name=Simple_repeat;Target=(TTTTC)n 1 48; GhWOX8_At downstream A10 RepeatMasker similarity 2371379 2371416 . + . Name=Simple_repeat;Target=(TTC)n 1 39; GhWOX8_At downstream A10 RepeatMasker similarity 2371448 2371486 . + . Name=Simple_repeat;Target=(ATTTAA)n 1 37; GhWOX8_At downstream A10 RepeatMasker similarity 2371628 2371676 . + . Name=Simple_repeat;Target=(TATTTTA)n 1 49; GhWOX8_At downstream A10 RepeatMasker similarity 2372891 2372929 . + . Name=Simple_repeat;Target=(AAATT)n 1 36; GhWOX8_At downstream A10 RepeatMasker similarity 2373384 2373471 . - . Name=DNA/CMC-EnSpm;Target=EnSpm-3_ALy 3942 4029; GhWOX8_At downstream A10 RepeatMasker similarity 2373402 2373455 . + . Name=Simple_repeat;Target=(AAGGTTT)n 1 55; GhWOX8_At downstream A10 RepeatMasker similarity 2374062 2374100 . + . Name=Simple_repeat;Target=(AAT)n 1 38; GhWOX8_At downstream A10 RepeatMasker similarity 2374293 2374332 . + . Name=Simple_repeat;Target=(AAATT)n 1 40; GhWOX8_At downstream A10 RepeatMasker similarity 2378698 2378734 . + . Name=Simple_repeat;Target=(AT)n 1 39; GhWOX8_At downstream A10 RepeatMasker similarity 2379868 2379895 . + . Name=Simple_repeat;Target=(GAT)n 1 28; GhWOX8_At gene_region A10 RepeatMasker similarity 2380390 2380408 . + . Name=Simple_repeat;Target=(CTA)n 1 19; GhWOX8_At upstream A10 RepeatMasker similarity 2380516 2380555 . + . Name=Simple_repeat;Target=(AAATGG)n 1 42; GhWOX8_At upstream A10 RepeatMasker similarity 2381267 2381303 . + . Name=Simple_repeat;Target=(TTATA)n 1 37; GhWOX8_At upstream A10 RepeatMasker similarity 2383244 2383298 . + . Name=Simple_repeat;Target=(TAAATA)n 1 57; GhWOX8_At upstream A10 RepeatMasker similarity 2384093 2384137 . + . Name=Simple_repeat;Target=(AAAG)n 1 43; GhWOX8_At upstream A10 RepeatMasker similarity 2385669 2385694 . + . Name=Simple_repeat;Target=(A)n 1 26; GhWOX8_At upstream D10 RepeatMasker similarity 10952370 10952404 . + . Name=Simple_repeat;Target=(TTTAAAT)n 1 36; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10952780 10952836 . + . Name=Simple_repeat;Target=(ATTTAAT)n 1 57; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10952780 10952825 . + . Name=Simple_repeat;Target=(ATTTAGT)n 1 45; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10952826 10952836 . + . Name=Simple_repeat;Target=(ATTTAAT)n 1 57; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10953501 10953657 . - . Name=Unspecified;Target=rnd-2_family-106 529 687; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10956074 10956105 . + . Name=Simple_repeat;Target=(AAAATA)n 1 34; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10958334 10958481 . + . Name=LTR/Copia;Target=ATCopia53_I-int 3480 3617; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10958480 10958999 . + . Name=Unspecified;Target=rnd-2_family-330 7233 7740; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10958983 10959014 . + . Name=Simple_repeat;Target=(CAATT)n 1 35; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10958994 10959801 . + . Name=Unspecified;Target=rnd-2_family-9 2006 2812; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10959117 10959177 . + . Name=Simple_repeat;Target=(AATT)n 1 60; GhWUS1b_Dt downstream D10 RepeatMasker similarity 10961295 10961338 . + . Name=Simple_repeat;Target=(CTT)n 1 44; GhWUS1b_Dt gene_region D10 RepeatMasker similarity 10962488 10962534 . + . Name=Simple_repeat;Target=(ATAAT)n 1 47; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10964071 10964137 . + . Name=Simple_repeat;Target=(TTAAAA)n 1 66; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10964547 10964572 . + . Name=Simple_repeat;Target=(TTTA)n 1 26; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10964846 10964910 . + . Name=Simple_repeat;Target=(ATT)n 1 67; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10970476 10970520 . + . Name=Simple_repeat;Target=(TCACATA)n 1 45; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10971582 10971720 . - . Name=Unspecified;Target=rnd-2_family-9 1012 1150; GhWUS1b_Dt upstream D10 RepeatMasker similarity 10971864 10971935 . + . Name=Simple_repeat;Target=(AAAC)n 1 70; GhWUS1b_Dt upstream D02 RepeatMasker similarity 17949054 17949110 . + . Name=Simple_repeat;Target=(ATCAAAT)n 1 53; GhWOX4_Dt upstream D02 RepeatMasker similarity 17950304 17950349 . + . Name=Simple_repeat;Target=(TATAA)n 1 46; GhWOX4_Dt upstream D02 RepeatMasker similarity 17953599 17953635 . + . Name=Simple_repeat;Target=(TTATTT)n 1 34; GhWOX4_Dt upstream D02 RepeatMasker similarity 17955906 17955935 . + . Name=Simple_repeat;Target=(ATTAA)n 1 28; GhWOX4_Dt upstream D02 RepeatMasker similarity 17957139 17957180 . + . Name=Simple_repeat;Target=(TTT)n 1 42; GhWOX4_Dt upstream D02 RepeatMasker similarity 17958931 17959019 . + . Name=Simple_repeat;Target=(AATT)n 1 84; GhWOX4_Dt downstream D02 RepeatMasker similarity 17959174 17959546 . + . Name=LINE/L1;Target=L1-5_ALy 2288 2656; GhWOX4_Dt downstream D02 RepeatMasker similarity 17960813 17962091 . - . Name=Unspecified;Target=rnd-2_family-330 7232 8524; GhWOX4_Dt downstream D02 RepeatMasker similarity 17962098 17962883 . - . Name=Unspecified;Target=rnd-2_family-330 6393 7184; GhWOX4_Dt downstream D02 RepeatMasker similarity 17962881 17965024 . - . Name=Unspecified;Target=rnd-2_family-330 4137 6258; GhWOX4_Dt downstream D02 RepeatMasker similarity 17964082 17964246 . + . Name=LTR/Gypsy;Target=Gypsy-5_ALY-I 2290 2468; GhWOX4_Dt downstream D02 RepeatMasker similarity 17964902 17964933 . + . Name=Low_complexity;Target=A-rich 1 35; GhWOX4_Dt downstream D02 RepeatMasker similarity 17965633 17965695 . + . Name=Simple_repeat;Target=(CCCTTCC)n 1 61; GhWOX4_Dt downstream D02 RepeatMasker similarity 17966597 17967907 . - . Name=Unspecified;Target=rnd-2_family-330 1994 3277; GhWOX4_Dt downstream A07 RepeatMasker similarity 57194352 57194665 . - . Name=Unspecified;Target=rnd-2_family-20 6330 6643; GhWOX13a_At upstream A07 RepeatMasker similarity 57195533 57195618 . + . Name=Simple_repeat;Target=(TTAA)n 1 86; GhWOX13a_At upstream A07 RepeatMasker similarity 57195533 57195611 . + . Name=Simple_repeat;Target=(TTAA)n 1 79; GhWOX13a_At upstream A07 RepeatMasker similarity 57195553 57195618 . + . Name=Simple_repeat;Target=(ATAA)n 1 66; GhWOX13a_At upstream A07 RepeatMasker similarity 57199198 57199227 . + . Name=Simple_repeat;Target=(TGTCC)n 1 30; GhWOX13a_At upstream A07 RepeatMasker similarity 57200295 57200338 . + . Name=Simple_repeat;Target=(ATTAA)n 1 43; GhWOX13a_At upstream A07 RepeatMasker similarity 57200865 57200900 . + . Name=Simple_repeat;Target=(TA)n 1 39; GhWOX13a_At upstream A07 RepeatMasker similarity 57201381 57201405 . + . Name=Simple_repeat;Target=(TA)n 1 25; GhWOX13a_At upstream A07 RepeatMasker similarity 57203158 57203197 . + . Name=Simple_repeat;Target=(ATTTTTA)n 1 38; GhWOX13a_At upstream A07 RepeatMasker similarity 57203647 57203707 . + . Name=Simple_repeat;Target=(TTTTCTT)n 1 58; GhWOX13a_At upstream A07 RepeatMasker similarity 57203648 57203692 . + . Name=Simple_repeat;Target=(TTTCTCC)n 1 45; GhWOX13a_At upstream A07 RepeatMasker similarity 57203684 57203712 . + . Name=Simple_repeat;Target=(TTTTC)n 1 28; GhWOX13a_At upstream A07 RepeatMasker similarity 57203693 57203707 . + . Name=Simple_repeat;Target=(TTTTCTT)n 2 58; GhWOX13a_At upstream A07 RepeatMasker similarity 57203829 57203894 . + . Name=Simple_repeat;Target=(ATGAGA)n 1 68; GhWOX13a_At upstream A07 RepeatMasker similarity 57204193 57204213 . + . Name=Simple_repeat;Target=(T)n 1 21; GhWOX13a_At gene_region A07 RepeatMasker similarity 57206166 57206202 . + . Name=Simple_repeat;Target=(TGTGCCAT)n 1 37; GhWOX13a_At downstream A07 RepeatMasker similarity 57206697 57206870 . - . Name=Unspecified;Target=rnd-2_family-20 8383 8548; GhWOX13a_At downstream A07 RepeatMasker similarity 57207004 57207076 . + . Name=Simple_repeat;Target=(AAAATAA)n 1 69; GhWOX13a_At downstream A07 RepeatMasker similarity 57211327 57211452 . - . Name=Unspecified;Target=rnd-2_family-20 10475 10600; GhWOX13a_At downstream A07 RepeatMasker similarity 57211858 57212005 . + . Name=Unspecified;Target=rnd-2_family-330 3806 3955; GhWOX13a_At downstream A07 RepeatMasker similarity 57213873 57213921 . + . Name=Simple_repeat;Target=(TTTAA)n 1 49; GhWOX13a_At downstream A07 RepeatMasker similarity 57214043 57214225 . + . Name=Unspecified;Target=rnd-2_family-20 8377 8549; GhWOX13a_At downstream A07 RepeatMasker similarity 57214225 57215061 . - . Name=Unspecified;Target=rnd-2_family-20 9653 10481; GhWOX13a_At downstream A07 RepeatMasker similarity 57214225 57214605 . + . Name=LTR/Gypsy;Target=Gypsy-25_ALY-I 3053 3432; GhWOX13a_At downstream A07 RepeatMasker similarity 57215330 57215436 . + . Name=Simple_repeat;Target=(TATA)n 1 113; GhWOX13a_At downstream A07 RepeatMasker similarity 57215406 57215454 . + . Name=Simple_repeat;Target=(TAAT)n 1 51; GhWOX13a_At downstream A07 RepeatMasker similarity 57215454 57215552 . + . Name=Simple_repeat;Target=(AAAAG)n 1 99; GhWOX13a_At downstream A01 RepeatMasker similarity 72693999 72694048 . + . Name=Simple_repeat;Target=(TTTTTA)n 1 48; GhWOX6_At downstream A01 RepeatMasker similarity 72694974 72695014 . + . Name=Simple_repeat;Target=(AATTT)n 1 40; GhWOX6_At downstream A01 RepeatMasker similarity 72695140 72695167 . + . Name=Simple_repeat;Target=(TTTTC)n 1 28; GhWOX6_At downstream A01 RepeatMasker similarity 72699430 72699464 . + . Name=Simple_repeat;Target=(TA)n 1 35; GhWOX6_At downstream A01 RepeatMasker similarity 72701256 72701307 . + . Name=Simple_repeat;Target=(CTTT)n 1 52; GhWOX6_At downstream A01 RepeatMasker similarity 72703942 72703981 . + . Name=Simple_repeat;Target=(GAAAAA)n 1 41; GhWOX6_At upstream A01 RepeatMasker similarity 72704590 72704634 . + . Name=Simple_repeat;Target=(ATAGAT)n 1 42; GhWOX6_At upstream A01 RepeatMasker similarity 72704590 72704624 . + . Name=Simple_repeat;Target=(ATAGAT)n 1 33; GhWOX6_At upstream A01 RepeatMasker similarity 72704606 72704634 . + . Name=Simple_repeat;Target=(ATATT)n 1 28; GhWOX6_At upstream A01 RepeatMasker similarity 72705289 72705337 . + . Name=Simple_repeat;Target=(AAAATAA)n 1 49; GhWOX6_At upstream A01 RepeatMasker similarity 72707110 72707209 . + . Name=Simple_repeat;Target=(TAA)n 1 105; GhWOX6_At upstream A01 RepeatMasker similarity 72708508 72708541 . + . Name=Simple_repeat;Target=(TTTTATG)n 1 37; GhWOX6_At upstream A01 RepeatMasker similarity 72708535 72708562 . + . Name=Simple_repeat;Target=(TTTAA)n 1 28; GhWOX6_At upstream A01 RepeatMasker similarity 72709739 72709781 . + . Name=Simple_repeat;Target=(ATG)n 1 43; GhWOX6_At upstream A01 RepeatMasker similarity 72710926 72711061 . + . Name=LTR/Copia;Target=Copia-12_ALY-I 234 276; GhWOX6_At upstream A01 RepeatMasker similarity 72711317 72712230 . + . Name=LTR/Copia;Target=Copia-12_ALY-I 777 2430; GhWOX6_At upstream D12 RepeatMasker similarity 10591429 10591455 . + . Name=Simple_repeat;Target=(AGA)n 1 27; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10594164 10594221 . + . Name=Simple_repeat;Target=(AATTT)n 1 55; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10594459 10594510 . + . Name=Simple_repeat;Target=(TCGAA)n 1 51; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10596022 10596065 . + . Name=Simple_repeat;Target=(TTTAAA)n 1 43; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10596236 10596277 . + . Name=Low_complexity;Target=A-rich 1 82; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10596236 10596321 . + . Name=Simple_repeat;Target=(CTAAAC)n 1 83; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10596278 10596320 . + . Name=Simple_repeat;Target=(AACCCT)n 1 44; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10597193 10597245 . + . Name=Simple_repeat;Target=(AAATTAA)n 1 54; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10597933 10597993 . + . Name=Simple_repeat;Target=(TAAAATT)n 1 57; GhWUS1a_Dt downstream D12 RepeatMasker similarity 10600170 10600209 . + . Name=Simple_repeat;Target=(CTT)n 1 40; GhWUS1a_Dt gene_region D12 RepeatMasker similarity 10602305 10602335 . + . Name=Simple_repeat;Target=(TTTC)n 1 30; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10602550 10602599 . + . Name=Simple_repeat;Target=(TTA)n 1 49; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10605051 10605104 . + . Name=Simple_repeat;Target=(ATCTTC)n 1 57; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10606215 10606271 . + . Name=Simple_repeat;Target=(AAT)n 1 58; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10608902 10608939 . + . Name=Simple_repeat;Target=(GGGTTA)n 1 38; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10610012 10610092 . + . Name=Simple_repeat;Target=(AAAAT)n 1 82; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10610346 10610404 . + . Name=Simple_repeat;Target=(TTTTTAC)n 1 58; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10610700 10610754 . + . Name=Simple_repeat;Target=(TTTTC)n 1 56; GhWUS1a_Dt upstream D12 RepeatMasker similarity 10611018 10611041 . + . Name=Simple_repeat;Target=(A)n 1 24; GhWUS1a_Dt upstream A02 RepeatMasker similarity 83228851 83228875 . + . Name=Simple_repeat;Target=(TTTTA)n 1 25; GhWOX13b_At upstream A02 RepeatMasker similarity 83229810 83229829 . + . Name=Simple_repeat;Target=(CAT)n 1 20; GhWOX13b_At upstream A02 RepeatMasker similarity 83235248 83235574 . - . Name=Unspecified;Target=rnd-2_family-188 16 373; GhWOX13b_At upstream A02 RepeatMasker similarity 83235668 83235764 . + . Name=Simple_repeat;Target=(TTTAAAA)n 1 94; GhWOX13b_At upstream A02 RepeatMasker similarity 83236996 83237042 . + . Name=Simple_repeat;Target=(ATATTTA)n 1 48; GhWOX13b_At upstream A02 RepeatMasker similarity 83238370 83238394 . + . Name=Simple_repeat;Target=(TAA)n 1 25; GhWOX13b_At gene_region A02 RepeatMasker similarity 83238609 83238629 . + . Name=Simple_repeat;Target=(GTGA)n 1 21; GhWOX13b_At gene_region A02 RepeatMasker similarity 83239186 83239228 . + . Name=Simple_repeat;Target=(CATATT)n 1 45; GhWOX13b_At downstream A02 RepeatMasker similarity 83239491 83239582 . + . Name=Simple_repeat;Target=(TTTTAAC)n 1 88; GhWOX13b_At downstream A02 RepeatMasker similarity 83240239 83240265 . + . Name=Simple_repeat;Target=(AACAA)n 1 27; GhWOX13b_At downstream A02 RepeatMasker similarity 83244779 83244827 . + . Name=Simple_repeat;Target=(A)n 1 49; GhWOX13b_At downstream A02 RepeatMasker similarity 83246779 83246806 . + . Name=Simple_repeat;Target=(TTTTC)n 1 27; GhWOX13b_At downstream D07 RepeatMasker similarity 12702928 12702960 . + . Name=Simple_repeat;Target=(TTAT)n 1 35; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12703812 12703942 . - . Name=Unspecified;Target=rnd-2_family-20 6267 6397; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12705488 12705664 . + . Name=Unspecified;Target=rnd-2_family-20 8383 8548; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12707055 12707195 . + . Name=LTR/Copia;Target=CASTOR_I-int 1253 1393; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12707547 12708152 . + . Name=LTR/Copia;Target=CASTOR_I-int 1763 2330; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12708606 12709632 . + . Name=LTR/Copia;Target=CASTOR_I-int 3203 4415; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12709991 12710013 . + . Name=Simple_repeat;Target=(A)n 1 23; GhWOX2a_Dt downstream D07 RepeatMasker similarity 12710687 12710703 . + . Name=Simple_repeat;Target=(GAG)n 1 17; GhWOX2a_Dt gene_region D07 RepeatMasker similarity 12713579 12713615 . + . Name=Simple_repeat;Target=(ATATTA)n 1 37; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12714552 12714578 . + . Name=Simple_repeat;Target=(CTT)n 1 28; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12714936 12714981 . + . Name=Simple_repeat;Target=(AAAAT)n 1 45; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12716768 12716793 . + . Name=Simple_repeat;Target=(T)n 1 26; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12717123 12717166 . + . Name=Simple_repeat;Target=(ACTAATT)n 1 40; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12718009 12718335 . - . Name=Unspecified;Target=rnd-2_family-188 7 336; GhWOX2a_Dt upstream D07 RepeatMasker similarity 12718954 12718980 . + . Name=Simple_repeat;Target=(TTTA)n 1 27; GhWOX2a_Dt upstream D05 RepeatMasker similarity 18062819 18062993 . + . Name=Simple_repeat;Target=(AAATTT)n 1 177; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18063227 18063286 . + . Name=Simple_repeat;Target=(AAAATT)n 1 59; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18063540 18063596 . + . Name=Simple_repeat;Target=(TTTAA)n 1 61; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18063545 18063594 . + . Name=Simple_repeat;Target=(ATTT)n 1 49; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18063948 18063985 . + . Name=Simple_repeat;Target=(TTAATT)n 1 40; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18065054 18065163 . + . Name=Simple_repeat;Target=(AATT)n 1 103; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18066080 18066136 . + . Name=Simple_repeat;Target=(ATAC)n 1 56; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18067622 18067703 . + . Name=Simple_repeat;Target=(TTTA)n 1 80; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18067726 18067860 . + . Name=Unspecified;Target=rnd-2_family-20 8383 8512; GhWOX4b_Dt downstream D05 RepeatMasker similarity 18071683 18071700 . + . Name=Simple_repeat;Target=(AG)n 1 18; GhWOX4b_Dt gene_region D05 RepeatMasker similarity 18072719 18072757 . + . Name=Simple_repeat;Target=(AAGAA)n 1 38; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18072974 18073000 . + . Name=Simple_repeat;Target=(TTTTA)n 1 28; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18075114 18075199 . + . Name=Simple_repeat;Target=(AACTAAA)n 1 86; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18075126 18075198 . + . Name=Simple_repeat;Target=(AAAATCC)n 1 74; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18080628 18080690 . + . Name=Simple_repeat;Target=(TCTT)n 1 59; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18080628 18080642 . + . Name=Simple_repeat;Target=(TCTT)n 1 23; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18080643 18080669 . + . Name=Simple_repeat;Target=(T)n 1 27; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18080670 18080690 . + . Name=Simple_repeat;Target=(TCTT)n 24 59; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18081023 18081068 . + . Name=Simple_repeat;Target=(AAATAAT)n 1 46; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18081263 18081304 . + . Name=Simple_repeat;Target=(AAC)n 1 45; GhWOX4b_Dt upstream D05 RepeatMasker similarity 18081598 18081644 . + . Name=Simple_repeat;Target=(ATATTTA)n 1 48; GhWOX4b_Dt upstream D10 RepeatMasker similarity 62449941 62450041 . + . Name=Simple_repeat;Target=(TTTCTT)n 1 98; GhWOX5_Dt downstream D10 RepeatMasker similarity 62451754 62451780 . + . Name=Simple_repeat;Target=(AT)n 1 27; GhWOX5_Dt downstream D10 RepeatMasker similarity 62452345 62452424 . + . Name=Simple_repeat;Target=(ATAATTT)n 1 73; GhWOX5_Dt downstream D10 RepeatMasker similarity 62453970 62454022 . + . Name=Simple_repeat;Target=(TA)n 1 57; GhWOX5_Dt downstream D10 RepeatMasker similarity 62454577 62454690 . + . Name=Simple_repeat;Target=(TA)n 1 122; GhWOX5_Dt downstream D10 RepeatMasker similarity 62458647 62458674 . + . Name=Simple_repeat;Target=(GAA)n 1 30; GhWOX5_Dt gene_region D10 RepeatMasker similarity 62458698 62458726 . + . Name=Simple_repeat;Target=(TTG)n 1 29; GhWOX5_Dt gene_region D10 RepeatMasker similarity 62459158 62459181 . + . Name=Simple_repeat;Target=(TA)n 1 25; GhWOX5_Dt upstream D10 RepeatMasker similarity 62460533 62460822 . + . Name=Unspecified;Target=rnd-2_family-188 85 375; GhWOX5_Dt upstream D10 RepeatMasker similarity 62461741 62461757 . + . Name=Simple_repeat;Target=(ATA)n 1 17; GhWOX5_Dt upstream D10 RepeatMasker similarity 62463337 62463372 . + . Name=Simple_repeat;Target=(TAAAATT)n 1 36; GhWOX5_Dt upstream D10 RepeatMasker similarity 62464138 62464169 . + . Name=Simple_repeat;Target=(CCTAAA)n 1 32; GhWOX5_Dt upstream D10 RepeatMasker similarity 62465467 62465504 . + . Name=Simple_repeat;Target=(TTAATT)n 1 36; GhWOX5_Dt upstream D10 RepeatMasker similarity 62467274 62467627 . + . Name=Unspecified;Target=rnd-2_family-188 1 375; GhWOX5_Dt upstream A05 RepeatMasker similarity 13643684 13643724 . + . Name=Simple_repeat;Target=(TTTAAA)n 1 39; GhWOX9_At upstream A05 RepeatMasker similarity 13646549 13646658 . + . Name=Simple_repeat;Target=(ATTTTAA)n 1 111; GhWOX9_At upstream A05 RepeatMasker similarity 13648145 13648190 . + . Name=Simple_repeat;Target=(TTTTTTA)n 1 46; GhWOX9_At upstream A05 RepeatMasker similarity 13648150 13648166 . + . Name=Simple_repeat;Target=(TA)n 1 17; GhWOX9_At upstream A05 RepeatMasker similarity 13648167 13648190 . + . Name=Simple_repeat;Target=(TTTTTTA)n 6 46; GhWOX9_At upstream A05 RepeatMasker similarity 13650275 13650312 . + . Name=Simple_repeat;Target=(TTAATT)n 1 41; GhWOX9_At upstream A05 RepeatMasker similarity 13650753 13650796 . + . Name=Simple_repeat;Target=(CAAAAAA)n 1 46; GhWOX9_At upstream A05 RepeatMasker similarity 13651107 13651132 . + . Name=Simple_repeat;Target=(CT)n 1 24; GhWOX9_At upstream A05 RepeatMasker similarity 13651445 13651481 . + . Name=Simple_repeat;Target=(TTTAT)n 1 37; GhWOX9_At upstream A05 RepeatMasker similarity 13656236 13656287 . + . Name=Simple_repeat;Target=(TATT)n 1 49; GhWOX9_At downstream A05 RepeatMasker similarity 13656236 13656290 . + . Name=Simple_repeat;Target=(TATT)n 1 51; GhWOX9_At downstream A05 RepeatMasker similarity 13656256 13656290 . + . Name=Simple_repeat;Target=(TTATTT)n 1 33; GhWOX9_At downstream A05 RepeatMasker similarity 13657127 13657155 . + . Name=Simple_repeat;Target=(AATTA)n 1 29; GhWOX9_At downstream A05 RepeatMasker similarity 13661380 13661442 . + . Name=Simple_repeat;Target=(TTTATTT)n 1 62; GhWOX9_At downstream A05 RepeatMasker similarity 13661632 13661648 . + . Name=Simple_repeat;Target=(A)n 1 17; GhWOX9_At downstream A05 RepeatMasker similarity 13662097 13662145 . + . Name=Simple_repeat;Target=(TATTAAA)n 1 46; GhWOX9_At downstream scaffold4075_D05 RepeatMasker similarity 3744 3808 . + . Name=Simple_repeat;Target=(TTTATGG)n 1 66; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 8420 8461 . + . Name=Simple_repeat;Target=(AAATATT)n 1 45; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 11031 11050 . + . Name=Simple_repeat;Target=(ATG)n 1 20; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 11781 11837 . + . Name=Simple_repeat;Target=(TA)n 1 58; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 11889 11944 . + . Name=Simple_repeat;Target=(TCTATA)n 1 56; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 13060 13096 . + . Name=Simple_repeat;Target=(CTCT)n 1 37; GhWOX3a_Dt upstream scaffold4075_D05 RepeatMasker similarity 13515 13559 . + . Name=Simple_repeat;Target=(CAACAT)n 1 46; GhWOX3a_Dt gene_region scaffold4075_D05 RepeatMasker similarity 14534 14561 . + . Name=Simple_repeat;Target=(CAA)n 1 28; GhWOX3a_Dt gene_region scaffold4075_D05 RepeatMasker similarity 14714 14737 . + . Name=Simple_repeat;Target=(A)n 1 24; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 14738 14780 . + . Name=Simple_repeat;Target=(TTTAGT)n 1 46; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 14949 14982 . + . Name=Simple_repeat;Target=(TTCCAA)n 1 33; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 15242 15267 . + . Name=Simple_repeat;Target=(ATT)n 1 27; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 15678 15736 . + . Name=Simple_repeat;Target=(GCAA)n 1 60; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 16091 16114 . + . Name=Simple_repeat;Target=(G)n 1 24; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 16225 16263 . + . Name=Simple_repeat;Target=(TCTT)n 1 39; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 16540 16623 . + . Name=Simple_repeat;Target=(TTAT)n 1 82; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 16853 16908 . - . Name=LTR/Copia;Target=ATCopia24I 2746 2798; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 16857 16908 . + . Name=Simple_repeat;Target=(TGA)n 1 52; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 21535 21592 . + . Name=Simple_repeat;Target=(AAAA)n 1 58; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 21605 21641 . + . Name=Simple_repeat;Target=(TCT)n 1 37; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 21933 21969 . + . Name=Simple_repeat;Target=(AGAGAAA)n 1 36; GhWOX3a_Dt downstream scaffold4075_D05 RepeatMasker similarity 22008 22050 . + . Name=Simple_repeat;Target=(AACA)n 1 42; GhWOX3a_Dt downstream A11 RepeatMasker similarity 88897267 88897313 . + . Name=Simple_repeat;Target=(TA)n 1 50; GhWOX12_At upstream A11 RepeatMasker similarity 88898579 88898672 . - . Name=Unspecified;Target=rnd-2_family-20 8325 8414; GhWOX12_At upstream A11 RepeatMasker similarity 88900840 88900928 . + . Name=Simple_repeat;Target=(AAAAGA)n 1 91; GhWOX12_At upstream A11 RepeatMasker similarity 88900846 88900918 . + . Name=Simple_repeat;Target=(AAAAG)n 1 69; GhWOX12_At upstream A11 RepeatMasker similarity 88900965 88901004 . + . Name=Simple_repeat;Target=(AAAAC)n 1 39; GhWOX12_At upstream A11 RepeatMasker similarity 88901813 88901851 . + . Name=Simple_repeat;Target=(TTTAT)n 1 39; GhWOX12_At upstream A11 RepeatMasker similarity 88902113 88902145 . + . Name=Simple_repeat;Target=(TTCATT)n 1 32; GhWOX12_At upstream A11 RepeatMasker similarity 88902428 88902433 . + . Name=Simple_repeat;Target=(ATAT)n 1 14; GhWOX12_At upstream A11 RepeatMasker similarity 88902428 88902482 . + . Name=Simple_repeat;Target=(ATAT)n 1 53; GhWOX12_At upstream A11 RepeatMasker similarity 88902434 88902470 . + . Name=Simple_repeat;Target=(ATAGT)n 1 41; GhWOX12_At upstream A11 RepeatMasker similarity 88902471 88902482 . + . Name=Simple_repeat;Target=(ATAT)n 15 53; GhWOX12_At upstream A11 RepeatMasker similarity 88903353 88903399 . + . Name=Simple_repeat;Target=(AAATT)n 1 47; GhWOX12_At upstream A11 RepeatMasker similarity 88904632 88904667 . + . Name=Simple_repeat;Target=(AATA)n 1 35; GhWOX12_At upstream A11 RepeatMasker similarity 88906696 88906724 . + . Name=Simple_repeat;Target=(AT)n 1 29; GhWOX12_At upstream A11 RepeatMasker similarity 88910117 88910199 . + . Name=Simple_repeat;Target=(TACAA)n 1 81; GhWOX12_At downstream A11 RepeatMasker similarity 88910238 88910262 . + . Name=Simple_repeat;Target=(TAA)n 1 24; GhWOX12_At downstream A11 RepeatMasker similarity 88910446 88910484 . + . Name=Simple_repeat;Target=(AAAAAT)n 1 39; GhWOX12_At downstream A11 RepeatMasker similarity 88910693 88910734 . + . Name=Simple_repeat;Target=(TTTAT)n 1 42; GhWOX12_At downstream A11 RepeatMasker similarity 88913755 88913784 . + . Name=Simple_repeat;Target=(TAGT)n 1 33; GhWOX12_At downstream A11 RepeatMasker similarity 88914862 88914944 . + . Name=Simple_repeat;Target=(AATAA)n 1 82; GhWOX12_At downstream A11 RepeatMasker similarity 88915647 88915689 . + . Name=Simple_repeat;Target=(TTGAGA)n 1 44; GhWOX12_At downstream A11 RepeatMasker similarity 88915675 88915747 . + . Name=Simple_repeat;Target=(ATACTGA)n 1 76; GhWOX12_At downstream A11 RepeatMasker similarity 88915982 88916140 . + . Name=Simple_repeat;Target=(TACTGT)n 1 164; GhWOX12_At downstream