{"text_format":"3","workbook":"xls","n_sheets":3,"sheets":["tableS1","tableS2","tableS3"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"tableS1","index":0,"n_rows":27,"n_cols":10,"rows_kept":27,"merged":[[0,0,0,9],[1,0,1,1],[1,2,2,2],[1,3,2,3],[1,4,2,4],[1,5,2,5],[1,6,1,8],[1,9,2,9]],"flags":["formulas_cached_only"]}
["Table S1 Characteristics of the twelve nuclear primer pairs newly developed in this study based on SCNG loci identified by different approaches"]
["Sequence ID",null,"Primer ID","Sequence（5'–3'）","Annealing temperature (°C)","Product Size (bp)","SCNG identification approaches",null,null,"AT annotation (PLAZA 2.5 database)"]
["CSE lineage","SW lineage",{"$nulls":4},"Markerminer","APVO  gene set","Vitaceae gene set"]
["Unigene18740","Unigene19709","Th-5F","GCAAGAGGTCTGAGAAGGATT",53.2,944,"+(Mostly)","+","-","AT3G54460:SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein"]
[null,null,"Th-5R","TGTGTTAGGAGTCGGTGTTC",52.9]
["Unigene15386","Unigene22243","Th-41F","CAAGCACGACTCCGATAGC",53.9,625,"+(Mostly)","-","+","AT1G08315:ARM repeat superfamily protein"]
[null,null,"Th-41R","TGACACAGCATTCTCCTTAGC",53.9]
["Unigene18350","Unigene13972","ThR-3F","TGCCTACATTACATCGCTGGT",55.4,893,"+(Strictly)","-","+","AT1G17870:ethylene-dependent gravitropism-deficient and yellow-green-like 3"]
[null,null,"ThR-3R","TTCATCTGTTGCTGGTACTTCTTC",55.5]
["Unigene16250","Unigene6646","ThR-6F","CGCAGAATCTCCGAAGACCTAA",56,895,"+(Strictly)","+","-","AT2G39910:ARM repeat superfamily protein"]
[null,null,"ThR-6R","ACAAGAAGCACAGACATCTCAAC",55.5]
["Unigene19053","CL1776_Contig3","ThR-11F","GCGGTGGATTCTGTGCTTAT",54,776,"+(Strictly)","+","+","AT5G26040:histone deacetylase 2"]
[null,null,"ThR-11R","GCCAGGTACTCATCAGTTGTG",54.6]
["Unigene19206","Unigene13074","ThR-19F","AGATCAGCACGACACTTCCA",54.6,476,"+(Mostly)","+","-","AT1G31730:Adaptin family protein"]
[null,null,"ThR-19R","CAACCTTGTGGCTAGTAGAAGAC",55.1]
["CL3642_Contig3","CL1107_Contig3","ThR-7F","TGTTGACTGACCATAATGAGGAAG",55,463,"+(Strictly)","+","-","AT2G26810:Putative methyltransferase family protein"]
[null,null,"ThR-7R","GCTCGTGATACATAGGCAAGAAT",55]
["CL7056_Contig2","CL3924_Contig2","ThR-27F","TGTCATACCAGCACCCAATAG",53.3,871,"+(Mostly)","+","-","AT5G58760:damaged DNA binding 2"]
[null,null,"ThR-27R","ATTCCAGTCTCCAAGTCAGTG",53.2]
["CL6017_Contig2","Unigene23060","ThR-28F","GCCAAGGTGATAGAGACAGTG",54,791,"+(Mostly)","+","-","AT1G07970:unnamed protein product"]
[null,null,"ThR-28R","GCCTCAATCGCTTCTTCCAT",54]
["Unigene12514","Unigene14911","ThR-31F","AACCAGATGACCACAAGGAAG",53.7,580,"+(Mostly)","+","-","AT5G05490:Rad21/Rec8-like family protein"]
[null,null,"ThR-31R","GAAGAGGTGCTGGATATTGGAT",53.7]
["Unigene18823","Unigene16035","ThR-33F","TGCTGCTAGAACCATCAACAAGT",56.8,783,"+(Mostly)","+","-","AT4G14605:Mitochondrial transcription termination factor family protein"]
[null,null,"ThR-33R","CTTCACCTTCTGCCTGCTATAAGT",56.9]
["CL520_Contig1","CL5247_Contig1","ThR-34F","TCTCCAGAACCTCTTCCAGAC",54.3,542,"+(Mostly)","+","-","AT5G52190:Sugar isomerase (SIS) family protein"]
[null,null,"ThR-34R ","TTCAAGATTGGTATGGCGTGAT ",54.2]

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["Table S2 Full list of 1018 SCNG loci identified from the transcriptomes of CSE and SW lineage, with their basic information including identification approaches, substitution rates between lineages and gene annotations.  '+' denotes the approaches that supported the single-copy status of the locus. "]
["No.","CSE lineage","SW lineage","SCNG identification approaches",null,null,"Length","Pairwise identity (%)","Substitutions","S-Substitutions","N-Substitutions","Ka/Ks","P-Value(Fisher)","Gene annotations"]
[{"$nulls":3},"APVO gene set","Vitaceae gene set","Markerminer      (Single copy status)",{"$nulls":7},"Nr-ID","Nr-annotation","Nt-ID","Nt-annotation","Swissprot-ID","Swissprot-annotation","COG-ID","COG-Function-Description","KO_id","KEGG-Gene","ko_definition","GO-BiologicalProcess","GO-MolecularFunction","Go-CellularComponent"]
[1,"CSE_Unigene19906","SW_Unigene15968","+","+","+(Mostly)",2322,{"v":0.99,"d":"99.00%"},23,{"v":11.8027,"d":"12"},{"v":11.1973,"d":"11"},{"v":0.321472,"d":"0.321"},{"v":0.00536381,"d":"0.0054"},"gi|225426862|ref|XP_002276931.1|","PREDICTED: uncharacterized protein LOC100265091 [Vitis vinifera]","gi|225426861|ref|XM_002276895.1|","PREDICTED: Vitis vinifera uncharacterized LOC100265091 (LOC100265091), mRNA","sp|Q1XDE2|RR1_PORYE","30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2","COG0539","Ribosomal protein S1","K14792","smo:SELMODRAFT_451253","rRNA biogenesis protein RRP5","GO:0006098//pentose-phosphate shunt;GO:0016117//carotenoid biosynthetic process;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0019252//starch biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009902//chloroplast relocation;GO:0015995//chlorophyll biosynthetic process;GO:0034660//ncRNA metabolic process;GO:0019344//cysteine biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process;GO:0042793//transcription from plastid promoter;GO:0010027//thylakoid membrane organization","-","GO:0009507//chloroplast"]
[2,"CSE_Unigene17003","SW_Unigene6556","+","+","+(Mostly)",768,{"v":0.995,"d":"99.50%"},4,1,3,{"v":1.14768,"d":"1.148"},{"v":0.721117,"d":"0.7211"},"gi|225432302|ref|XP_002273600.1|","PREDICTED: alanyl-tRNA editing protein AlaX-L-like [Vitis vinifera]","gi|225432301|ref|XM_002273564.1|","PREDICTED: Vitis vinifera alanyl-tRNA editing protein AlaX-L-like (LOC100244170), mRNA","sp|Q015G2|SYAP_OSTTA","Probable alanine-tRNA ligase, chloroplastic OS=Ostreococcus tauri GN=Ot07g01940 PE=3 SV=1","COG0013","Alanyl-tRNA synthetase","K01872","ota:Ot07g01940","alanyl-tRNA synthetase [EC:6.1.1.7]","GO:0006419//alanyl-tRNA aminoacylation","GO:0003676//nucleic acid binding;GO:0004813//alanine-tRNA ligase activity;GO:0005524//ATP binding","GO:0005737//cytoplasm"]
[3,"CSE_CL2396_Contig2","SW_CL7775_Contig2","+","+","+(Mostly)",1389,{"v":0.992,"d":"99.20%"},11,6,5,{"v":0.291002,"d":"0.291"},{"v":0.0412731,"d":"0.0413"},"gi|225435925|ref|XP_002267920.1|","PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera] >gi|296083920|emb|CBI24308.3| unnamed protein product [Vitis vinifera]","gi|225435924|ref|XM_002267884.1|","PREDICTED: Vitis vinifera cysteine desulfurase 2, chloroplastic-like (LOC100246217), mRNA","sp|Q93WX6|NFS2_ARATH","Cysteine desulfurase 2, chloroplastic OS=Arabidopsis thaliana GN=NFS2 PE=1 SV=1","COG0520","Selenocysteine lyase","K11717","vvi:100246217","cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]","GO:0018283//iron incorporation into metallo-sulfur cluster;GO:0000302//response to reactive oxygen species;GO:0010039//response to iron ion;GO:0001887//selenium compound metabolic process;GO:0055072//iron ion homeostasis;GO:0010269//response to selenium ion;GO:0006534//cysteine metabolic process;GO:0009073//aromatic amino acid family biosynthetic process","GO:0008483//transaminase activity;GO:0031071//cysteine desulfurase activity;GO:0009000//selenocysteine lyase activity;GO:0030170//pyridoxal phosphate binding","GO:0009507//chloroplast"]
[4,"CSE_CL6456_Contig1","SW_CL2614_Contig2","+","+","+(Mostly)",1245,{"v":0.993,"d":"99.30%"},9,2,7,{"v":1.34179,"d":"1.342"},{"v":0.946508,"d":"0.9465"},"gi|225439176|ref|XP_002274655.1|","PREDICTED: uncharacterized protein LOC100258667 [Vitis vinifera] >gi|296085885|emb|CBI31209.3| unnamed protein product [Vitis vinifera]","gi|225439175|ref|XM_002274619.1|","PREDICTED: Vitis vinifera uncharacterized LOC100258667 (LOC100258667), mRNA","sp|Q8RWM3|MED27_ARATH","Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana GN=MED27 PE=1 SV=1","-","-","K15170","vvi:100258667","mediator of RNA polymerase II transcription subunit 27","GO:0046482//para-aminobenzoic acid metabolic process","-","GO:0016592//mediator complex;GO:0016023//cytoplasmic membrane-bounded vesicle"]
[5,"CSE_CL6877_Contig1","SW_Unigene22504","+","+","+(Mostly)",1869,{"v":0.994,"d":"99.40%"},11,4,7,{"v":0.482438,"d":"0.482"},{"v":0.199083,"d":"0.1991"},"gi|302144065|emb|CBI23170.3|","unnamed protein product [Vitis vinifera]","gi|359483319|ref|XM_002265042.2|","PREDICTED: Vitis vinifera tyrosyl-DNA phosphodiesterase 1-like (LOC100247070), mRNA","-","-","-","-","K10862","vvi:100247070","tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]","GO:0009616//virus induced gene silencing;GO:0010050//vegetative phase change;GO:0006281//DNA repair","GO:0017005//3'-tyrosyl-DNA phosphodiesterase activity","GO:0005634//nucleus"]
[6,"CSE_Unigene13550","SW_Unigene5500","+","+","+(Mostly)",795,{"v":0.994,"d":"99.40%"},5,2,3,{"v":0.536412,"d":"0.536"},{"v":0.395646,"d":"0.3956"},"gi|225463464|ref|XP_002272948.1|","PREDICTED: uncharacterized protein LOC100248593 [Vitis vinifera]","gi|225463463|ref|XM_002272912.1|","PREDICTED: Vitis vinifera uncharacterized LOC100248593 (LOC100248593), mRNA","-","-","-","-","-","-","-","-","-","GO:0016020//membrane;GO:0009507//chloroplast"]
[7,"CSE_Unigene16544","SW_Unigene16710","+","+","+(Mostly)",1386,{"v":0.99,"d":"99.00%"},14,7,7,{"v":0.271016,"d":"0.271"},{"v":0.0168777,"d":"0.0169"},"gi|225444999|ref|XP_002282931.1|","PREDICTED: histone acetyltransferase type B catalytic subunit [Vitis vinifera]","gi|225444998|ref|XM_002282895.1|","PREDICTED: Vitis vinifera histone acetyltransferase type B catalytic subunit-like (LOC100250987), mRNA","sp|Q9FJT8|HATB_ARATH","Histone acetyltransferase type B catalytic subunit OS=Arabidopsis thaliana GN=HAG2 PE=2 SV=1","-","-","K11303","vvi:100250987","histone acetyltransferase 1 [EC:2.3.1.48]","GO:0006261//DNA-dependent DNA replication;GO:0048449//floral organ formation;GO:0009909//regulation of flower development;GO:0016573//histone acetylation;GO:0006348//chromatin silencing at telomere","GO:0010485//H4 histone acetyltransferase activity","GO:0005829//cytosol;GO:0005634//nucleus"]
[8,"CSE_CL5301_Contig2","SW_CL4399_Contig2","+","+","+(Mostly)",1185,{"v":0.996,"d":"99.60%"},5,3,2,{"v":0.212957,"d":"0.213"},{"v":0.0952905,"d":"0.0953"},"gi|359487720|ref|XP_002281063.2|","PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera] >gi|296088298|emb|CBI36743.3| unnamed protein product [Vitis vinifera]","gi|359487719|ref|XM_002281027.2|","PREDICTED: Vitis vinifera DNA excision repair protein ERCC-1-like (LOC100244316), mRNA","sp|Q9MA98|ERCC1_ARATH","DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana GN=ERCC1 PE=2 SV=1","COG5241","Nucleotide excision repair endonuclease NEF1, RAD10 subunit","K10849","vvi:100244316","DNA excision repair protein ERCC-1","GO:0010332//response to gamma radiation;GO:0010213//non-photoreactive DNA repair;GO:0010224//response to UV-B;GO:0006284//base-excision repair;GO:0000724//double-strand break repair via homologous recombination;GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0006294//nucleotide-excision repair, preincision complex assembly","GO:0003684//damaged DNA binding;GO:0017108//5'-flap endonuclease activity","GO:0005634//nucleus"]
[9,"CSE_Unigene20106","SW_Unigene16769","+","+","+(Mostly)",2946,{"v":0.992,"d":"99.20%"},25,16,9,{"v":0.236405,"d":"0.236"},{"v":0.000394172,"d":"0.0004"},"gi|147863226|emb|CAN82620.1|","hypothetical protein VITISV_002311 [Vitis vinifera]","gi|225450925|ref|XM_002284540.1|","PREDICTED: Vitis vinifera mannosylglycoprotein endo-beta-mannosidase-like (LOC100254646), mRNA","sp|Q5H7P5|EBM_LILLO","Mannosylglycoprotein endo-beta-mannosidase OS=Lilium longiflorum GN=EBM PE=1 SV=4","COG3250","Beta-galactosidase/beta-glucuronidase","K01192","vcn:VOLCADRAFT_118894","beta-mannosidase [EC:3.2.1.25]","GO:0005975//carbohydrate metabolic process","GO:0033947","GO:0005773//vacuole"]
[10,"CSE_CL7632_Contig1","SW_CL5404_Contig1","+","+","+(Mostly)",1170,{"v":0.995,"d":"99.50%"},6,3,3,{"v":0.365881,"d":"0.366"},{"v":0.199373,"d":"0.1994"},"gi|225453122|ref|XP_002272712.1|","PREDICTED: uncharacterized protein C20orf4 homolog [Vitis vinifera] >gi|296087181|emb|CBI33555.3| unnamed protein product [Vitis vinifera]","gi|359488206|ref|XM_002272676.2|","PREDICTED: Vitis vinifera uncharacterized LOC100267400 (LOC100267400), mRNA","-","-","-","-","K13205","vvi:100267400","A1 cistron-splicing factor AAR2","GO:0000278//mitotic cell cycle;GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0042542//response to hydrogen peroxide;GO:0009408//response to heat;GO:0006396//RNA processing","-","GO:0009507//chloroplast"]
[11,"CSE_Unigene18445","SW_Unigene17567","+","+","+(Mostly)",1620,{"v":0.997,"d":"99.70%"},5,3,2,{"v":0.209178,"d":"0.209"},{"v":0.0918619,"d":"0.0919"},"gi|225451864|ref|XP_002278588.1|","PREDICTED: protein furry homolog-like [Vitis vinifera]","gi|359488316|ref|XM_002278552.2|","PREDICTED: Vitis vinifera protein furry homolog-like (LOC100251481), mRNA","-","-","-","-","-","-","-","GO:0006487//protein N-linked glycosylation","-","GO:0005886//plasma membrane;GO:0005739//mitochondrion"]
[12,"CSE_Unigene14898","SW_Unigene10977","+","+","+(Mostly)",990,{"v":0.991,"d":"99.10%"},9,6,3,{"v":0.124833,"d":"0.125"},{"v":0.00315581,"d":"0.0032"},"gi|225453762|ref|XP_002274443.1|","PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Vitis vinifera] >gi|296089080|emb|CBI38783.3| unnamed protein product [Vitis vinifera]","gi|359489364|ref|XM_002274407.2|","PREDICTED: Vitis vinifera protein-ribulosamine 3-kinase, chloroplastic-like (LOC100252411), mRNA","sp|Q9LEW8|FN3KR_ARATH","Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=At3g61080 PE=1 SV=2","COG3001","Fructosamine-3-kinase","-","-","-","GO:0015996//chlorophyll catabolic process;GO:0016310//phosphorylation","GO:0016301//kinase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[13,"CSE_Unigene12181","SW_Unigene8585","+","+","+(Mostly)",981,{"v":0.998,"d":"99.80%"},2,1,1,{"v":0.299199,"d":"0.299"},{"v":0.355365,"d":"0.3554"},"gi|225458790|ref|XP_002285179.1|","PREDICTED: arginine N-methyltransferase 2 isoform 1 [Vitis vinifera]","gi|349716132|emb|FQ397114.1|","Vitis vinifera clone SS0AEB7YM17","sp|Q9SAR5|AKR2_ARATH","Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2","COG0666","FOG: Ankyrin repeat","K00599","olu:OSTLU_86989","[EC:2.1.1.-]","GO:0035246//peptidyl-arginine N-methylation;GO:0009165//nucleotide biosynthetic process","GO:0030731//guanidinoacetate N-methyltransferase activity;GO:0016274//protein-arginine N-methyltransferase activity","GO:0005737//cytoplasm"]
[14,"CSE_Unigene19053","SW_CL1776_Contig3","+","+","+(Strictly)",1074,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.321853,"d":"0.322"},{"v":0.248188,"d":"0.2482"},"gi|225429480|ref|XP_002277742.1|","PREDICTED: histone deacetylase 2 [Vitis vinifera] >gi|296081627|emb|CBI20632.3| unnamed protein product [Vitis vinifera]","gi|359476228|ref|XM_002277706.2|","PREDICTED: Vitis vinifera histone deacetylase 2-like (LOC100264550), mRNA","sp|Q944K3|HDA2_ARATH","Histone deacetylase 2 OS=Arabidopsis thaliana GN=HDA2 PE=1 SV=2","COG0123","Deacetylases, including yeast histone deacetylase and acetoin utilization protein","K11418","vvi:100264550","histone deacetylase 11 [EC:3.5.1.98]","-","GO:0004407//histone deacetylase activity","GO:0005634//nucleus"]
[15,"CSE_Unigene13292","SW_CL8264_Contig1","+","-","+(Mostly)",552,{"v":0.995,"d":"99.50%"},3,1,2,{"v":0.679799,"d":"0.680"},{"v":0.569312,"d":"0.5693"},"gi|359496253|ref|XP_003635192.1|","PREDICTED: uncharacterized protein LOC100259710 isoform 2 [Vitis vinifera]","gi|359496252|ref|XM_003635144.1|","PREDICTED: Vitis vinifera uncharacterized LOC100259710, transcript variant 2 (LOC100259710), mRNA","-","-","COG2938","Uncharacterized conserved protein","-","-","-","GO:0009062//fatty acid catabolic process;GO:0080022//primary root development","GO:0008177//succinate dehydrogenase (ubiquinone) activity","GO:0005739//mitochondrion"]
[16,"CSE_CL1475_Contig1","SW_Unigene14367","+","-","+(Mostly)",768,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.161023,"d":"0.161"},{"v":0.135501,"d":"0.1355"},"gi|225463119|ref|XP_002265135.1|","PREDICTED: probable F-actin-capping protein subunit beta [Vitis vinifera] >gi|297739352|emb|CBI29342.3| unnamed protein product [Vitis vinifera]","gi|359495176|ref|XM_002265099.2|","PREDICTED: Vitis vinifera probable F-actin-capping protein subunit beta-like (LOC100242539), mRNA","sp|Q9M9G7|CAPZB_ARATH","Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1","-","-","K10365","vvi:100242539","capping protein (actin filament) muscle Z-line, beta","GO:0009408//response to heat;GO:0051693//actin filament capping","GO:0003779//actin binding","GO:0071203//WASH complex;GO:0008290//F-actin capping protein complex"]
[17,"CSE_Unigene19117","SW_Unigene15129","+","-","+(Mostly)",1050,{"v":0.994,"d":"99.40%"},6,2,4,{"v":0.840653,"d":"0.841"},{"v":0.878453,"d":"0.8785"},"gi|359494811|ref|XP_002271020.2|","PREDICTED: uncharacterized protein LOC100260014 [Vitis vinifera] >gi|302144208|emb|CBI23335.3| unnamed protein product [Vitis vinifera]","gi|359494810|ref|XM_002270984.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260014 (LOC100260014), mRNA","sp|Q56XR7|STR4A_ARATH","Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1","-","-","-","-","-","-","-","GO:0009535//chloroplast thylakoid membrane"]
[18,"CSE_Unigene18740","SW_Unigene19709","+","-","+(Mostly)",4098,{"v":0.995,"d":"99.50%"},21,{"v":11.8693,"d":"12"},{"v":9.13068,"d":"9"},{"v":0.244539,"d":"0.245"},{"v":0.0012359,"d":"0.0012"},"gi|359495006|ref|XP_002266009.2|","PREDICTED: F-box protein At3g54460-like [Vitis vinifera]","gi|359495005|ref|XM_002265973.2|","PREDICTED: Vitis vinifera F-box protein At3g54460-like (LOC100254946), mRNA","sp|Q9M1I1|FB304_ARATH","F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1","COG0553","Superfamily II DNA/RNA helicases, SNF2 family","K15505","bdi:100838307","DNA repair protein RAD5 [EC:3.6.4.-]","-","GO:0004386//helicase activity;GO:0003677//DNA binding;GO:0005524//ATP binding;GO:0008270//zinc ion binding","GO:0009506//plasmodesma;GO:0005634//nucleus"]
[19,"CSE_Unigene15376","SW_CL1978_Contig1","+","-","+(Mostly)",999,{"v":0.984,"d":"98.40%"},13,7,6,{"v":0.351158,"d":"0.351"},{"v":0.0547639,"d":"0.0548"},"gi|359473791|ref|XP_002266409.2|","PREDICTED: uncharacterized protein LOC100255676 [Vitis vinifera]","gi|359473790|ref|XM_002266373.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255676 (LOC100255676), mRNA","-","-","COG3618","Predicted metal-dependent hydrolase of the TIM-barrel fold","K07046","vvi:100255676",null,"GO:0008152//metabolic process","GO:0016787//hydrolase activity","GO:0009507//chloroplast"]
[20,"CSE_Unigene15459","SW_CL7755_Contig3","+","-","+(Mostly)",2088,{"v":0.997,"d":"99.70%"},6,3,3,{"v":0.328649,"d":"0.329"},{"v":0.165624,"d":"0.1656"},"gi|359473699|ref|XP_002266890.2|","PREDICTED: neurolysin, mitochondrial-like [Vitis vinifera]","gi|359473698|ref|XM_002266854.2|","PREDICTED: Vitis vinifera neurolysin, mitochondrial-like (LOC100251085), mRNA","-","-","COG0339","Zn-dependent oligopeptidases","K01392","vvi:100251085","thimet oligopeptidase [EC:3.4.24.15]","GO:0045787//positive regulation of cell cycle;GO:0031507//heterochromatin assembly;GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0009909//regulation of flower development;GO:0048449//floral organ formation;GO:0007059//chromosome segregation;GO:0006508//proteolysis;GO:0042138//meiotic DNA double-strand break formation;GO:0016570//histone modification;GO:0007129//synapsis;GO:0007131//reciprocal meiotic recombination","GO:0046872//metal ion binding;GO:0004222//metalloendopeptidase activity","GO:0005739//mitochondrion"]
[21,"CSE_Unigene780","SW_CL1804_Contig2","+","-","+(Mostly)",1743,{"v":0.982,"d":"98.20%"},25,{"v":8.51749,"d":"9"},{"v":16.4825,"d":"16"},{"v":0.755914,"d":"0.756"},{"v":0.50191,"d":"0.5019"},"gi|297738026|emb|CBI27227.3|","unnamed protein product [Vitis vinifera]","gi|359472773|ref|XM_002275607.2|","PREDICTED: Vitis vinifera DNA polymerase eta-like (LOC100266192), mRNA","sp|A3EWL3|REV1_ARATH","DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 PE=2 SV=1","COG0389","Nucleotidyltransferase/DNA polymerase involved in DNA repair","K03509","vvi:100266192","DNA polymerase eta subunit [EC:2.7.7.7]","GO:0010224//response to UV-B;GO:0042276//error-prone translesion synthesis;GO:0042732//D-xylose metabolic process;GO:0006261//DNA-dependent DNA replication","GO:0003684//damaged DNA binding;GO:0003887//DNA-directed DNA polymerase activity;GO:0005515//protein binding","-"]
[22,"CSE_Unigene14586","SW_Unigene22065","+","-","+(Mostly)",564,{"v":0.989,"d":"98.90%"},6,2,4,{"v":0.648901,"d":"0.649"},{"v":0.45601,"d":"0.4560"},"gi|225425642|ref|XP_002272064.1|","PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Vitis vinifera] >gi|296086349|emb|CBI31938.3| unnamed protein product [Vitis vinifera]","gi|349718399|emb|FQ381404.1|","Vitis vinifera clone SS0ABP1YL18","sp|Q9XI73|PQL1_ARATH","PsbQ-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PQL1 PE=1 SV=1","-","-","K08901","vvi:100243071","photosystem II oxygen-evolving enhancer protein 3","GO:0009767//photosynthetic electron transport chain;GO:0006098//pentose-phosphate shunt;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity","GO:0005509//calcium ion binding;GO:0045156//electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity","GO:0030095//chloroplast photosystem II;GO:0019898//extrinsic to membrane;GO:0009344//nitrite reductase complex [NAD(P)H];GO:0009654//oxygen evolving complex;GO:0009543//chloroplast thylakoid lumen"]
[23,"CSE_Unigene15112","SW_Unigene11070","+","-","+(Mostly)",678,{"v":0.993,"d":"99.30%"},5,2,3,{"v":0.481223,"d":"0.481"},{"v":0.352766,"d":"0.3528"},"gi|225425744|ref|XP_002276441.1|","PREDICTED: probable peptidyl-prolyl cis-trans isomerase isoform 1 [Vitis vinifera] >gi|359473259|ref|XP_003631278.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase isoform 2 [Vitis vinifera] >gi|296086396|emb|CBI31985.3| unnamed protein product [Vitis vinifera]","gi|359473258|ref|XM_003631230.1|","PREDICTED: Vitis vinifera probable peptidyl-prolyl cis-trans isomerase-like, transcript variant 2 (LOC100244863), mRNA","sp|Q9FJX0|PPIL2_ARATH","Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K12736","olu:OSTLU_40159","peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization","GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0005768//endosome;GO:0005794//Golgi apparatus;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005576//extracellular region;GO:0005802//trans-Golgi network"]
[24,"CSE_Unigene8453","SW_CL2252_Contig2","+","-","+(Mostly)",1407,{"v":0.994,"d":"99.40%"},9,4,5,{"v":0.53026,"d":"0.530"},{"v":0.423705,"d":"0.4237"},"gi|297742086|emb|CBI33873.3|","unnamed protein product [Vitis vinifera]","gi|359474471|ref|XM_002277827.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253932 (LOC100253932), mRNA","sp|B3H6K1|Y4791_ARATH","Uncharacterized protein At4g17910 OS=Arabidopsis thaliana GN=At4g17910 PE=2 SV=2","COG5062","Uncharacterized membrane protein","K05283","vvi:100253932","phosphatidylinositol glycan, class W [EC:2.3.-.-]","GO:0006506//GPI anchor biosynthetic process","GO:0046872//metal ion binding;GO:0016746//transferase activity, transferring acyl groups","GO:0005739//mitochondrion;GO:0016021//integral to membrane;GO:0005789//endoplasmic reticulum membrane"]
[25,"CSE_CL6502_Contig1","SW_Unigene6814","+","-","+(Mostly)",972,{"v":0.992,"d":"99.20%"},8,7,1,{"v":0.0470315,"d":"0.047"},{"v":0.000356289,"d":"0.0004"},"gi|147790324|emb|CAN61200.1|","hypothetical protein VITISV_003214 [Vitis vinifera]","gi|359474078|ref|XM_002270924.2|","PREDICTED: Vitis vinifera nucleoporin SEH1-like (LOC100263869), mRNA","-","-","-","-","K14299","rcu:RCOM_1691290","nucleoporin SEH1","GO:0043161//proteasomal ubiquitin-dependent protein catabolic process;GO:0043248//proteasome assembly;GO:0051788//response to misfolded protein;GO:0006626//protein targeting to mitochondrion;GO:0006635//fatty acid beta-oxidation","GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0005834//heterotrimeric G-protein complex;GO:0005635//nuclear envelope;GO:0005737//cytoplasm"]
[26,"CSE_CL4815_Contig1","SW_CL4727_Contig2","+","-","+(Mostly)",1512,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.174777,"d":"0.175"},{"v":0.0426981,"d":"0.0427"},"gi|225426218|ref|XP_002263667.1|","PREDICTED: methyltransferase-like protein 17, mitochondrial [Vitis vinifera] >gi|297742403|emb|CBI34552.3| unnamed protein product [Vitis vinifera]","gi|225426217|ref|XM_002263631.1|","PREDICTED: Vitis vinifera methyltransferase-like protein 17, mitochondrial (LOC100251375), mRNA","-","-","COG5459","Predicted rRNA methylase","-","-","-","GO:0032259//methylation;GO:0006412//translation","GO:0005507//copper ion binding;GO:0008168//methyltransferase activity","GO:0005739//mitochondrion"]
[27,"CSE_CL4724_Contig2","SW_CL498_Contig1","+","-","+(Mostly)",588,{"v":0.985,"d":"98.50%"},9,{"v":1.01668,"d":"1"},{"v":7.98332,"d":"8"},{"v":3.32632,"d":"3.326"},{"v":0.252003,"d":"0.2520"},"gi|297742527|emb|CBI34676.3|","unnamed protein product [Vitis vinifera]","gi|147861042|emb|AM449398.2|","Vitis vinifera contig VV78X138743.6, whole genome shotgun sequence","-","-","COG0816","Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)","K07447","vvi:100266792","putative holliday junction resolvase [EC:3.1.-.-]","GO:0006310//DNA recombination;GO:0006281//DNA repair","GO:0016788//hydrolase activity, acting on ester bonds;GO:0003676//nucleic acid binding","GO:0005737//cytoplasm"]
[28,"CSE_CL4873_Contig2","SW_Unigene22517","+","-","+(Mostly)",636,{"v":0.995,"d":"99.50%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225427470|ref|XP_002270678.1|","PREDICTED: single-stranded DNA-binding protein, mitochondrial [Vitis vinifera] >gi|296088446|emb|CBI37437.3| unnamed protein product [Vitis vinifera]","gi|225427469|ref|XM_002270642.1|","PREDICTED: Vitis vinifera single-stranded DNA-binding protein, mitochondrial-like (LOC100258550), mRNA","sp|Q84J78|SSBP_ARATH","Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At4g11060 PE=2 SV=1","COG0629","Single-stranded DNA-binding protein","K03111","vvi:100258550","single-strand DNA-binding protein","GO:0006260//DNA replication","GO:0003697//single-stranded DNA binding","GO:0005739//mitochondrion"]
[29,"CSE_Unigene19206","SW_Unigene13074","+","-","+(Mostly)",2520,{"v":0.994,"d":"99.40%"},16,10,6,{"v":0.231545,"d":"0.232"},{"v":0.00409333,"d":"0.0041"},"gi|359474753|ref|XP_002269504.2|","PREDICTED: AP-4 complex subunit epsilon-like [Vitis vinifera]","gi|359474752|ref|XM_002269468.2|","PREDICTED: Vitis vinifera AP-4 complex subunit epsilon-like (LOC100249377), mRNA","sp|Q8L7A9|AP4E_ARATH","AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730 PE=1 SV=1","-","-","K12400","pop:POPTR_596858","AP-4 complex subunit epsilon-1","GO:0006007//glucose catabolic process;GO:0016192//vesicle-mediated transport;GO:0006886//intracellular protein transport;GO:0006487//protein N-linked glycosylation","GO:0030276//clathrin binding","GO:0005829//cytosol;GO:0009506//plasmodesma;GO:0030117//membrane coat;GO:0005886//plasma membrane"]
[30,"CSE_Unigene986","SW_Unigene21579","+","-","+(Mostly)",1014,{"v":0.994,"d":"99.40%"},6,4,2,{"v":0.187811,"d":"0.188"},{"v":0.0511949,"d":"0.0512"},"gi|225462874|ref|XP_002272947.1|","PREDICTED: probable nitronate monooxygenase [Vitis vinifera] >gi|296087479|emb|CBI34068.3| unnamed protein product [Vitis vinifera]","gi|349713617|emb|FQ391585.1|","Vitis vinifera clone SS0AP1YF09","-","-","COG2070","Dioxygenases related to 2-nitropropane dioxygenase","-","-","-","GO:0046482//para-aminobenzoic acid metabolic process;GO:0046686//response to cadmium ion;GO:0009610//response to symbiotic fungus;GO:0055114//oxidation-reduction process","GO:0003938//IMP dehydrogenase activity;GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0018580//nitronate monooxygenase activity","GO:0005829//cytosol;GO:0005739//mitochondrion"]
[31,"CSE_Unigene394","SW_CL2927_Contig2","+","-","+(Mostly)",636,{"v":0.998,"d":"99.80%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225428987|ref|XP_002265287.1|","PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis vinifera] >gi|147817733|emb|CAN60150.1| hypothetical protein VITISV_044331 [Vitis vinifera] >gi|296083052|emb|CBI22456.3| unnamed protein product [Vitis vinifera]","gi|225428986|ref|XM_002265251.1|","PREDICTED: Vitis vinifera ribosomal RNA large subunit methyltransferase N-like (LOC100259962), mRNA","-","-","COG0820","Predicted Fe-S-cluster redox enzyme","K06941","osa:4326401","23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]","GO:0000278//mitotic cell cycle;GO:0001510//RNA methylation;GO:0006364//rRNA processing","GO:0051536//iron-sulfur cluster binding;GO:0008173//RNA methyltransferase activity","GO:0005737//cytoplasm"]
[32,"CSE_Unigene551","SW_Unigene16483","+","-","+(Mostly)",756,{"v":0.991,"d":"99.10%"},7,4,3,{"v":0.295461,"d":"0.295"},{"v":0.106173,"d":"0.1062"},"gi|225431171|ref|XP_002269473.1|","PREDICTED: peptide methionine sulfoxide reductase A5 [Vitis vinifera] >gi|297735029|emb|CBI17391.3| unnamed protein product [Vitis vinifera]","gi|359476603|ref|XM_002269437.2|","PREDICTED: Vitis vinifera peptide methionine sulfoxide reductase A5-like (LOC100241959), mRNA","sp|Q9SL43|MSRA5_ARATH","Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana GN=MSRA5 PE=2 SV=1","COG0225","Peptide methionine sulfoxide reductase","K07304","vvi:100241959","peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]","GO:0006464//cellular protein modification process;GO:0055114//oxidation-reduction process","GO:0008113//peptide-methionine-(S)-S-oxide reductase activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0009507//chloroplast"]
[33,"CSE_Unigene13551","SW_Unigene7531","+","-","+(Mostly)",1095,{"v":0.995,"d":"99.50%"},6,5,1,{"v":0.0682752,"d":"0.068"},{"v":0.00485369,"d":"0.0049"},"gi|359476685|ref|XP_002266355.2|","PREDICTED: uncharacterized hydrolase yugF-like [Vitis vinifera] >gi|297735133|emb|CBI17495.3| unnamed protein product [Vitis vinifera]","gi|359476684|ref|XM_002266319.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261647 (LOC100261647), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","K13535","cre:CHLREDRAFT_121979","cardiolipin-specific phospholipase [EC:3.1.1.-]","GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity;GO:0000023//maltose metabolic process","GO:0080030//methyl indole-3-acetate esterase activity;GO:0004091//carboxylesterase activity;GO:0050253//retinyl-palmitate esterase activity;GO:0080031//methyl salicylate esterase activity;GO:0080032//methyl jasmonate esterase activity","GO:0009941//chloroplast envelope"]
[34,"CSE_Unigene11709","SW_CL6659_Contig1","+","-","+(Mostly)",1764,{"v":0.993,"d":"99.30%"},12,9,3,{"v":0.111326,"d":"0.111"},{"v":0.000414244,"d":"0.0004"},"gi|359476610|ref|XP_003631864.1|","PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis vinifera] >gi|297735254|emb|CBI17616.3| unnamed protein product [Vitis vinifera]","gi|359476609|ref|XM_003631816.1|","PREDICTED: Vitis vinifera riboflavin biosynthesis protein RibD-like (LOC100264997), mRNA","-","-","COG1985","Pyrimidine reductase, riboflavin biosynthesis","K11752","ppp:PHYPADRAFT_129273","diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]","GO:0009231//riboflavin biosynthetic process;GO:0010119//regulation of stomatal movement;GO:0046443//FAD metabolic process;GO:0009414//response to water deprivation;GO:0019252//starch biosynthetic process;GO:0043622//cortical microtubule organization;GO:0010468//regulation of gene expression;GO:0042742//defense response to bacterium;GO:0000188//inactivation of MAPK activity;GO:0009644//response to high light intensity;GO:0009658//chloroplast organization;GO:0009409//response to cold;GO:0009737//response to abscisic acid stimulus;GO:0055114//oxidation-reduction process;GO:0007129//synapsis;GO:0006470//protein dephosphorylation","GO:0008138//protein tyrosine/serine/threonine phosphatase activity;GO:0016772//transferase activity, transferring phosphorus-containing groups;GO:0005515//protein binding;GO:0008270//zinc ion binding;GO:0033549//MAP kinase phosphatase activity;GO:0004725//protein tyrosine phosphatase activity;GO:0008835//diaminohydroxyphosphoribosylaminopyrimidine deaminase activity;GO:0050661//NADP binding;GO:0030170//pyridoxal phosphate binding;GO:0008703//5-amino-6-(5-phosphoribosylamino)uracil reductase activity;GO:0004645//phosphorylase activity","GO:0005829//cytosol;GO:0009570//chloroplast stroma;GO:0005634//nucleus"]
[35,"CSE_Unigene5024","SW_Unigene14982","+","-","+(Mostly)",570,{"v":0.982,"d":"98.20%"},10,7,3,{"v":0.0958758,"d":"0.096"},{"v":0.000527171,"d":"0.0005"},"gi|225430602|ref|XP_002265803.1|","PREDICTED: uncharacterized protein C11orf73 homolog [Vitis vinifera] >gi|147800174|emb|CAN77663.1| hypothetical protein VITISV_027383 [Vitis vinifera] >gi|239056165|emb|CAQ58596.1| Unknown gene [Vitis vinifera] >gi|296085140|emb|CBI28635.3| unnamed protein product [Vitis vinifera]","gi|359476521|ref|XM_002265767.2|","PREDICTED: Vitis vinifera uncharacterized LOC100257053 (LOC100257053), mRNA","sp|Q9LK03|PERK2_ARATH","Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3","-","-","K01783","ota:Ot06g01930","ribulose-phosphate 3-epimerase [EC:5.1.3.1]","GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0034976//response to endoplasmic reticulum stress;GO:0042542//response to hydrogen peroxide;GO:0009408//response to heat","-","GO:0005829//cytosol"]
[36,"CSE_CL291_Contig3","SW_CL4212_Contig2","+","-","+(Mostly)",531,{"v":0.994,"d":"99.40%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225466251|ref|XP_002270403.1|","PREDICTED: armadillo repeat-containing protein 7 [Vitis vinifera] >gi|297738150|emb|CBI27351.3| unnamed protein product [Vitis vinifera]","gi|359476478|ref|XM_002270367.2|","PREDICTED: Vitis vinifera armadillo repeat-containing protein 7-like (LOC100266771), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[37,"CSE_Unigene12462","SW_Unigene21738","+","-","+(Mostly)",498,{"v":0.992,"d":"99.20%"},4,1,3,{"v":1.07201,"d":"1.072"},{"v":0.701923,"d":"0.7019"},"gi|225429434|ref|XP_002276450.1|","PREDICTED: UPF0587 protein C1orf123 homolog [Vitis vinifera] >gi|296081606|emb|CBI20611.3| unnamed protein product [Vitis vinifera]","gi|359476211|ref|XM_002276414.2|","PREDICTED: Vitis vinifera uncharacterized LOC100254402 (LOC100254402), mRNA","-","-","-","-","-","-","-","-","-","-"]
[38,"CSE_CL4886_Contig1","SW_CL664_Contig2","+","-","+(Mostly)",645,{"v":0.989,"d":"98.90%"},7,"NA",7,"NA","NA","gi|225429654|ref|XP_002281227.1|","PREDICTED: uncharacterized protein LOC100257708 [Vitis vinifera] >gi|296081705|emb|CBI20710.3| unnamed protein product [Vitis vinifera]","gi|359476272|ref|XM_002281191.2|","PREDICTED: Vitis vinifera uncharacterized LOC100257708 (LOC100257708), mRNA","-","-","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K03686","smo:SELMODRAFT_167519","molecular chaperone DnaJ","-","-","GO:0009535//chloroplast thylakoid membrane"]
[39,"CSE_CL7204_Contig1","SW_CL5697_Contig2","+","-","+(Mostly)",777,{"v":0.988,"d":"98.80%"},9,4,5,{"v":0.481853,"d":"0.482"},{"v":0.224397,"d":"0.2244"},"gi|359476346|ref|XP_002281160.2|","PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera]","gi|359476345|ref|XM_002281124.2|","PREDICTED: Vitis vinifera thioredoxin-related transmembrane protein 2-like (LOC100254144), mRNA","-","-","-","-","-","-","-","-","-","-"]
[40,"CSE_Unigene16390","SW_Unigene21983","+","-","+(Mostly)",810,{"v":0.993,"d":"99.30%"},6,2,4,{"v":0.657998,"d":"0.658"},{"v":0.461477,"d":"0.4615"},"gi|225432108|ref|XP_002262955.1|","PREDICTED: uncharacterized protein LOC100251180 [Vitis vinifera]","gi|359477439|ref|XM_002262919.2|","PREDICTED: Vitis vinifera uncharacterized LOC100251180 (LOC100251180), mRNA","-","-","-","-","-","-","-","-","-","-"]
[41,"CSE_Unigene22992","SW_CL7949_Contig2","+","-","+(Mostly)",642,{"v":0.995,"d":"99.50%"},3,1,2,{"v":0.678332,"d":"0.678"},{"v":0.568515,"d":"0.5685"},"gi|225432460|ref|XP_002278797.1|","PREDICTED: uncharacterized protein LOC100252797 [Vitis vinifera] >gi|147777374|emb|CAN73835.1| hypothetical protein VITISV_043470 [Vitis vinifera] >gi|297736948|emb|CBI26149.3| unnamed protein product [Vitis vinifera]","gi|349703431|emb|FQ383394.1|","Vitis vinifera clone SS0ABG20YI17","-","-","COG0566","rRNA methylases","K15507","olu:OSTLU_27615","21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]","GO:0001510//RNA methylation;GO:0006396//RNA processing;GO:0016558//protein import into peroxisome matrix;GO:0006635//fatty acid beta-oxidation","GO:0008173//RNA methyltransferase activity;GO:0003723//RNA binding","GO:0009536//plastid"]
[42,"CSE_Unigene1687","SW_CL7255_Contig2","+","-","+(Mostly)",2148,{"v":0.996,"d":"99.60%"},8,2,6,{"v":0.871313,"d":"0.871"},{"v":0.870518,"d":"0.8705"},"gi|225432660|ref|XP_002282406.1|","PREDICTED: uncharacterized protein LOC100259756 isoform 1 [Vitis vinifera] >gi|297737050|emb|CBI26251.3| unnamed protein product [Vitis vinifera]","gi|359477520|ref|XM_002282370.2|","PREDICTED: Vitis vinifera uncharacterized LOC100259756, transcript variant 1 (LOC100259756), mRNA","-","-","-","-","K08902","zma:100282043","photosystem II Psb27 protein","GO:0006098//pentose-phosphate shunt;GO:0010207//photosystem II assembly","-","GO:0009543//chloroplast thylakoid lumen"]
[43,"CSE_Unigene14298","SW_Unigene11156","+","-","+(Mostly)",654,{"v":0.992,"d":"99.20%"},5,"NA",5,"NA","NA","gi|225432876|ref|XP_002280020.1|","PREDICTED: uncharacterized protein LOC100252711 [Vitis vinifera] >gi|297737148|emb|CBI26349.3| unnamed protein product [Vitis vinifera]","gi|349720399|emb|FQ381646.1|","Vitis vinifera clone SS0ABP1YA14","-","-","-","-","-","-","-","GO:0006979//response to oxidative stress;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0010027//thylakoid membrane organization;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport","-","GO:0009535//chloroplast thylakoid membrane"]
[44,"CSE_Unigene11575","SW_CL2138_Contig1","+","-","+(Mostly)",708,{"v":0.984,"d":"98.40%"},11,7,4,{"v":0.191566,"d":"0.192"},{"v":0.00834471,"d":"0.0083"},"gi|225433598|ref|XP_002273067.1|","PREDICTED: uncharacterized protein LOC100258998 [Vitis vinifera] >gi|298205160|emb|CBI17219.3| unnamed protein product [Vitis vinifera]","gi|359477910|ref|XM_002273031.2|","PREDICTED: Vitis vinifera uncharacterized LOC100258998 (LOC100258998), mRNA","-","-","-","-","-","-","-","GO:0006261//DNA-dependent DNA replication;GO:0006312//mitotic recombination;GO:0009560//embryo sac egg cell differentiation","-","GO:0005737//cytoplasm"]
[45,"CSE_Unigene14676","SW_Unigene22490","+","-","+(Mostly)",1098,{"v":0.991,"d":"99.10%"},10,3,7,{"v":0.953327,"d":"0.953"},{"v":0.968085,"d":"0.9681"},"gi|225433694|ref|XP_002267391.1|","PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis vinifera]","gi|349720143|emb|FQ392871.1|","Vitis vinifera clone SS0AFA3YN23","sp|Q9SAC0|ZCIS_ARATH","15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana GN=Z-ISO PE=1 SV=1","COG4094","Predicted membrane protein","K15744","vvi:100258367","zeta-carotene isomerase [EC:5.2.1.12]","GO:0016120//carotene biosynthetic process","GO:0090471//9,15,9'-tri-cis-zeta-carotene isomerase activity","GO:0031969//chloroplast membrane;GO:0016021//integral to membrane"]
[46,"CSE_Unigene13572","SW_Unigene10978","+","-","+(Mostly)",792,{"v":0.98,"d":"98.00%"},16,6,10,{"v":0.740142,"d":"0.740"},{"v":0.58552,"d":"0.5855"},"gi|296089632|emb|CBI39451.3|","unnamed protein product [Vitis vinifera]","gi|225433710|ref|XR_077468.1|","PREDICTED: Vitis vinifera uncharacterized LOC100251412 (LOC100251412), miscRNA","-","-","-","-","-","-","-","-","GO:0004386//helicase activity;GO:1901363;GO:0097159//organic cyclic compound binding","GO:0005634//nucleus;GO:0009536//plastid"]
[47,"CSE_CL993_Contig1","SW_Unigene22575","+","-","+(Mostly)",888,{"v":0.978,"d":"97.80%"},11,5,6,{"v":0.369627,"d":"0.370"},{"v":0.0949751,"d":"0.0950"},"gi|225432037|ref|XP_002273724.1|","PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera] >gi|296083213|emb|CBI22849.3| unnamed protein product [Vitis vinifera]","gi|225432036|ref|XM_002273688.1|","PREDICTED: Vitis vinifera uncharacterized LOC100243195 (LOC100243195), mRNA","-","-","COG0360","Ribosomal protein S6","-","-","-","GO:0031348//negative regulation of defense response;GO:0006346//methylation-dependent chromatin silencing;GO:0031048//chromatin silencing by small RNA;GO:0016246//RNA interference;GO:0006312//mitotic recombination;GO:0006261//DNA-dependent DNA replication;GO:0009793//embryo development ending in seed dormancy;GO:0051567//histone H3-K9 methylation;GO:0006412//translation;GO:0048449//floral organ formation;GO:0009560//embryo sac egg cell differentiation;GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0009909//regulation of flower development;GO:0000398//mRNA splicing, via spliceosome;GO:0042254//ribosome biogenesis","GO:0003677//DNA binding;GO:0003735//structural constituent of ribosome;GO:0016887//ATPase activity;GO:0005524//ATP binding;GO:0019843//rRNA binding","GO:0005840//ribosome;GO:0005663//DNA replication factor C complex;GO:0005634//nucleus"]
[48,"CSE_Unigene14446","SW_Unigene12554","+","-","+(Mostly)",669,{"v":0.987,"d":"98.70%"},9,3,6,{"v":0.931979,"d":"0.932"},{"v":0.968737,"d":"0.9687"},"gi|359477222|ref|XP_002277268.2|","PREDICTED: seed maturation protein PM36 [Vitis vinifera]","gi|359477221|ref|XM_002277232.2|","PREDICTED: Vitis vinifera seed maturation protein PM36-like (LOC100265331), mRNA","sp|Q9SWB6|PM36_SOYBN","Seed maturation protein PM36 OS=Glycine max GN=PM36 PE=2 SV=1","COG0819","Putative transcription activator","-","-","-","-","-","-"]
[49,"CSE_Unigene991","SW_Unigene18440","+","-","+(Mostly)",1506,{"v":0.99,"d":"99.00%"},12,5,7,{"v":0.519635,"d":"0.520"},{"v":0.304047,"d":"0.3040"},"gi|359478316|ref|XP_002273627.2|","PREDICTED: diphthamide biosynthesis protein 2-like [Vitis vinifera] >gi|296084273|emb|CBI24661.3| unnamed protein product [Vitis vinifera]","gi|359478315|ref|XM_002273591.2|","PREDICTED: Vitis vinifera diphthamide biosynthesis protein 2-like (LOC100262956), mRNA","-","-","COG1736","Diphthamide synthase subunit DPH2","-","-","-","GO:0017183//peptidyl-diphthamide biosynthetic process from peptidyl-histidine;GO:0015824//proline transport","-","GO:0005737//cytoplasm"]
[50,"CSE_Unigene10610","SW_CL6350_Contig1","+","-","+(Mostly)",615,{"v":0.984,"d":"98.40%"},10,5,5,{"v":0.26973,"d":"0.270"},{"v":0.0430652,"d":"0.0431"},"gi|296084277|emb|CBI24665.3|","unnamed protein product [Vitis vinifera]","gi|359478319|ref|XM_002273624.2|","PREDICTED: Vitis vinifera trigger factor-like (LOC100257831), mRNA","-","-","COG0544","FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)","-","-","-","GO:0006457//protein folding;GO:0016226//iron-sulfur cluster assembly;GO:0006364//rRNA processing;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009658//chloroplast organization;GO:0006399//tRNA metabolic process;GO:0010207//photosystem II assembly;GO:0045036//protein targeting to chloroplast;GO:0009073//aromatic amino acid family biosynthetic process","-","GO:0009570//chloroplast stroma"]
[51,"CSE_Unigene15667","SW_Unigene15446","+","-","+(Mostly)",1536,{"v":0.995,"d":"99.50%"},7,5,2,{"v":0.122231,"d":"0.122"},{"v":0.00972869,"d":"0.0097"},"gi|225434512|ref|XP_002278434.1|","PREDICTED: pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Vitis vinifera]","gi|225434511|ref|XM_002278398.1|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At2g30100, chloroplastic-like (LOC100251804), mRNA","sp|Q0WNN7|PP176_ARATH","Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana GN=At2g30100 PE=2 SV=2","-","-","K11323","vcn:VOLCADRAFT_121342","histone arginine demethylase JMJD6 [EC:1.14.11.-]","-","-","GO:0009507//chloroplast"]
[52,"CSE_CL7056_Contig2","SW_CL3924_Contig2","+","-","+(Mostly)",1683,{"v":0.992,"d":"99.20%"},13,7,6,{"v":0.215903,"d":"0.216"},{"v":0.00747611,"d":"0.0075"},"gi|225434600|ref|XP_002279214.1|","PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera] >gi|147833025|emb|CAN61895.1| hypothetical protein VITISV_028792 [Vitis vinifera] >gi|297745903|emb|CBI15959.3| unnamed protein product [Vitis vinifera]","gi|359478842|ref|XM_002279178.2|","PREDICTED: Vitis vinifera protein DAMAGED DNA-BINDING 2-like (LOC100250121), mRNA","sp|Q6NQ88|DDB2_ARATH","Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana GN=DDB2 PE=1 SV=1","COG2319","FOG: WD40 repeat","K10140","vvi:100250121","DNA damage-binding protein 2","GO:0010224//response to UV-B;GO:0006281//DNA repair","GO:0003677//DNA binding;GO:0008270//zinc ion binding;GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[53,"CSE_CL6017_Contig2","SW_Unigene23060","+","-","+(Mostly)",2052,{"v":0.988,"d":"98.80%"},25,15,10,{"v":0.255497,"d":"0.255"},{"v":0.00075198,"d":"0.0008"},"gi|297746229|emb|CBI16285.3|","unnamed protein product [Vitis vinifera]","gi|225435258|ref|XM_002282156.1|","PREDICTED: Vitis vinifera uncharacterized LOC100256992 (LOC100256992), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus;GO:0016021//integral to membrane"]
[54,"CSE_Unigene13486","SW_Unigene22280","+","-","+(Mostly)",771,{"v":0.992,"d":"99.20%"},6,3,3,{"v":0.383294,"d":"0.383"},{"v":0.215222,"d":"0.2152"},"gi|225435289|ref|XP_002285095.1|","PREDICTED: pyridoxal biosynthesis protein PDX2-like [Vitis vinifera]","gi|349713708|emb|FQ391676.1|","Vitis vinifera clone SS0AP1YA06","sp|Q8LAD0|PDX2_ARATH","Pyridoxal biosynthesis protein PDX2 OS=Arabidopsis thaliana GN=PDX2 PE=1 SV=1","COG0311","Predicted glutamine amidotransferase involved in pyridoxine biosynthesis","K08681","vvi:100267348","glutamine amidotransferase [EC:2.6.-.-]","GO:0008615//pyridoxine biosynthetic process;GO:0006541//glutamine metabolic process;GO:0009793//embryo development ending in seed dormancy","GO:0004359//glutaminase activity;GO:0016740//transferase activity;GO:0046982//protein heterodimerization activity","GO:0005829//cytosol"]
[55,"CSE_Unigene15056","SW_Unigene23001","+","-","+(Mostly)",2523,{"v":0.992,"d":"99.20%"},20,10,10,{"v":0.268717,"d":"0.269"},{"v":0.00414313,"d":"0.0041"},"gi|359478697|ref|XP_002282314.2|","PREDICTED: zinc finger CCCH domain-containing protein 24-like [Vitis vinifera]","gi|359478696|ref|XM_002282278.2|","PREDICTED: Vitis vinifera zinc finger CCCH domain-containing protein 24-like (LOC100262197), mRNA","sp|Q8L7S3|C3H24_ARATH","Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana GN=At2g28450 PE=2 SV=1","COG2265","SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase","K15332","vvi:100262197","tRNA (uracil-5-)-methyltransferase","GO:0009560//embryo sac egg cell differentiation;GO:0016070//RNA metabolic process;GO:0000741//karyogamy;GO:0006606//protein import into nucleus;GO:0032259//methylation","GO:0097159//organic cyclic compound binding;GO:1901363;GO:0008168//methyltransferase activity","-"]
[56,"CSE_CL4307_Contig2","SW_CL4874_Contig2","+","-","+(Mostly)",807,{"v":0.989,"d":"98.90%"},9,4,5,{"v":0.41766,"d":"0.418"},{"v":0.168081,"d":"0.1681"},"gi|225435305|ref|XP_002285123.1|","PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis vinifera] >gi|297746251|emb|CBI16307.3| unnamed protein product [Vitis vinifera]","gi|225435304|ref|XM_002285087.1|","PREDICTED: Vitis vinifera yrdC domain-containing protein, mitochondrial-like (LOC100251962), mRNA","-","-","COG0009","Putative translation factor (SUA5)","K07566","vcn:VOLCADRAFT_56845","tRNA threonylcarbamoyladenosine biosynthesis protein","-","GO:0003725//double-stranded RNA binding","GO:0005739//mitochondrion"]
[57,"CSE_Unigene9413","SW_Unigene22796","+","-","+(Mostly)",579,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225435973|ref|XP_002271255.1|","PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Vitis vinifera] >gi|296083946|emb|CBI24334.3| unnamed protein product [Vitis vinifera]","gi|225435972|ref|XM_002271219.1|","PREDICTED: Vitis vinifera RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like (LOC100256509), mRNA","-","-","COG5211","RNA polymerase II-interacting protein involved in transcription start site selection","K15544","vvi:100256509","RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]","GO:0006397//mRNA processing;GO:0006470//protein dephosphorylation","GO:0004721//phosphoprotein phosphatase activity","GO:0009507//chloroplast;GO:0005634//nucleus;GO:0005739//mitochondrion"]
[58,"CSE_Unigene11863","SW_Unigene22803","+","-","+(Mostly)",1344,{"v":0.994,"d":"99.40%"},8,6,2,{"v":0.128059,"d":"0.128"},{"v":0.00761144,"d":"0.0076"},"gi|225438942|ref|XP_002279446.1|","PREDICTED: major facilitator superfamily domain-containing protein 5 [Vitis vinifera] >gi|296087347|emb|CBI33721.3| unnamed protein product [Vitis vinifera]","gi|225438941|ref|XM_002279410.1|","PREDICTED: Vitis vinifera major facilitator superfamily domain-containing protein 5-like (LOC100245788), mRNA","-","-","-","-","-","-","-","-","-","GO:0016020//membrane"]
[59,"CSE_Unigene17726","SW_Unigene5538","+","-","+(Mostly)",1287,{"v":0.991,"d":"99.10%"},11,7,4,{"v":0.217237,"d":"0.217"},{"v":0.00244036,"d":"0.0024"},"gi|359479631|ref|XP_003632308.1|","PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like [Vitis vinifera] >gi|296085216|emb|CBI28711.3| unnamed protein product [Vitis vinifera]","gi|359479630|ref|XM_003632260.1|","PREDICTED: Vitis vinifera tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like (LOC100855304), mRNA","sp|Q8H0T9|KTNB1_ARATH","Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3","COG2319","FOG: WD40 repeat","K15443","vvi:100855304","tRNA (guanine-N(7)-)-methyltransferase subunit TRM82","GO:0006400//tRNA modification;GO:0008618//7-methylguanosine metabolic process;GO:0001510//RNA methylation","GO:0000166//nucleotide binding","GO:0005737//cytoplasm"]
[60,"CSE_Unigene13603","SW_Unigene11005","+","-","+(Mostly)",522,{"v":0.987,"d":"98.70%"},4,2,2,{"v":0.323039,"d":"0.323"},{"v":0.25018,"d":"0.2502"},"gi|359479661|ref|XP_003632323.1|","PREDICTED: uncharacterized protein LOC100852813 [Vitis vinifera]","gi|359479660|ref|XM_003632275.1|","PREDICTED: Vitis vinifera uncharacterized LOC100852813 (LOC100852813), mRNA","-","-","-","-","-","-","-","-","-","-"]
[61,"CSE_Unigene14477","SW_CL7779_Contig1","+","-","+(Mostly)",951,{"v":0.989,"d":"98.90%"},10,6,4,{"v":0.260325,"d":"0.260"},{"v":0.0357897,"d":"0.0358"},"gi|359479800|ref|XP_002271766.2|","PREDICTED: uncharacterized protein LOC100249345 [Vitis vinifera] >gi|296086712|emb|CBI32347.3| unnamed protein product [Vitis vinifera]","gi|359479799|ref|XM_002271730.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249345 (LOC100249345), mRNA","sp|Q39089|PAC_ARATH","Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana GN=PAC PE=2 SV=1","-","-","-","-","-","GO:0071482//cellular response to light stimulus;GO:0009965//leaf morphogenesis;GO:0016117//carotenoid biosynthetic process;GO:0009658//chloroplast organization;GO:0010239//chloroplast mRNA processing","-","GO:0009501//amyloplast;GO:0009513//etioplast;GO:0009509//chromoplast;GO:0009537//proplastid;GO:0009507//chloroplast"]
[62,"CSE_Unigene12004","SW_Unigene22795","+","-","+(Mostly)",636,{"v":0.992,"d":"99.20%"},5,3,2,{"v":0.238451,"d":"0.238"},{"v":0.0178773,"d":"0.0179"},"gi|225438690|ref|XP_002277554.1|","PREDICTED: eukaryotic initiation factor 4A [Vitis vinifera] >gi|296082429|emb|CBI21434.3| unnamed protein product [Vitis vinifera]","gi|225438689|ref|XM_002277518.1|","PREDICTED: Vitis vinifera eukaryotic initiation factor 4A-like (LOC100244066), mRNA","sp|P41380|IF4A3_NICPL","Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1","COG0513","Superfamily II DNA and RNA helicases","K13025","gmx:100795032","ATP-dependent RNA helicase [EC:3.6.4.13]","-","-","GO:0005634//nucleus"]
[63,"CSE_CL5675_Contig1","SW_CL8707_Contig2","+","-","+(Mostly)",957,{"v":0.989,"d":"98.90%"},8,3,5,{"v":0.541523,"d":"0.542"},{"v":0.311018,"d":"0.3110"},"gi|147791053|emb|CAN68023.1|","hypothetical protein VITISV_003624 [Vitis vinifera]","gi|147791049|emb|AM462494.2|","Vitis vinifera contig VV78X054501.10, whole genome shotgun sequence","-","-","COG3315","O-Methyltransferase involved in polyketide biosynthesis","-","-","-","GO:0032259//methylation","GO:0008168//methyltransferase activity","-"]
[64,"CSE_Unigene13571","SW_Unigene11690","+","-","+(Mostly)",2229,{"v":0.997,"d":"99.70%"},7,5,2,{"v":0.132489,"d":"0.132"},{"v":0.012709,"d":"0.0127"},"gi|225437400|ref|XP_002270318.1|","PREDICTED: gamma-tubulin complex component 4 homolog [Vitis vinifera] >gi|297743902|emb|CBI36872.3| unnamed protein product [Vitis vinifera]","gi|225437399|ref|XM_002270282.1|","PREDICTED: Vitis vinifera gamma-tubulin complex component 4 homolog-like (LOC100248708), mRNA","sp|Q9M350|GCP4_ARATH","Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana GN=At3g53760 PE=2 SV=2","-","-","-","-","-","GO:0040007//growth;GO:0009909//regulation of flower development;GO:0048449//floral organ formation;GO:0016570//histone modification;GO:0043622//cortical microtubule organization;GO:0007020//microtubule nucleation","GO:0015631//tubulin binding","GO:0005815//microtubule organizing center;GO:0005739//mitochondrion;GO:0000922//spindle pole;GO:0045298//tubulin complex;GO:0009506//plasmodesma"]
[65,"CSE_CL6624_Contig2","SW_CL6664_Contig2","+","-","+(Mostly)",804,{"v":0.988,"d":"98.80%"},10,5,5,{"v":0.372545,"d":"0.373"},{"v":0.107246,"d":"0.1072"},"gi|225438097|ref|XP_002277335.1|","PREDICTED: serine/threonine-protein kinase 19 [Vitis vinifera] >gi|297744163|emb|CBI37133.3| unnamed protein product [Vitis vinifera]","gi|225438096|ref|XM_002277299.1|","PREDICTED: Vitis vinifera serine/threonine-protein kinase 19-like (LOC100260094), mRNA","-","-","-","-","K08880","vvi:100260094","serine/threonine kinase 19 [EC:2.7.11.1]","GO:0016310//phosphorylation","GO:0016301//kinase activity","GO:0005634//nucleus;GO:0009536//plastid"]
[66,"CSE_Unigene14080","SW_Unigene15426","+","-","+(Mostly)",1455,{"v":0.988,"d":"98.80%"},17,9,8,{"v":0.284594,"d":"0.285"},{"v":0.0103148,"d":"0.0103"},"gi|297744261|emb|CBI37231.3|","unnamed protein product [Vitis vinifera]","gi|359480081|ref|XM_002267608.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253269 (LOC100253269), mRNA","-","-","-","-","-","-","-","GO:0009658//chloroplast organization;GO:0006098//pentose-phosphate shunt","-","GO:0009507//chloroplast"]
[67,"CSE_Unigene15609","SW_Unigene11985","+","-","+(Mostly)",891,{"v":0.993,"d":"99.30%"},6,4,2,{"v":0.196618,"d":"0.197"},{"v":0.0573443,"d":"0.0573"},"gi|225439398|ref|XP_002263823.1|","PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Vitis vinifera] >gi|296083172|emb|CBI22808.3| unnamed protein product [Vitis vinifera]","gi|225439397|ref|XM_002263787.1|","PREDICTED: Vitis vinifera monothiol glutaredoxin-S16, chloroplastic-like (LOC100245544), mRNA","sp|Q8H7F6|GRS16_ARATH","Monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana GN=GRXS16 PE=2 SV=2","COG0278","Glutaredoxin-related protein","K07390","smo:SELMODRAFT_107150","monothiol glutaredoxin","GO:0045454//cell redox homeostasis;GO:0048653//anther development;GO:0006812//cation transport","GO:0051536//iron-sulfur cluster binding;GO:0009055//electron carrier activity;GO:0015035//protein disulfide oxidoreductase activity","GO:0009570//chloroplast stroma"]
[68,"CSE_CL3584_Contig1","SW_Unigene10801","+","-","+(Mostly)",1215,{"v":0.996,"d":"99.60%"},5,2,3,{"v":0.548409,"d":"0.548"},{"v":0.403891,"d":"0.4039"},"gi|359481109|ref|XP_002267146.2|","PREDICTED: uncharacterized protein At3g58460-like [Vitis vinifera] >gi|296089310|emb|CBI39082.3| unnamed protein product [Vitis vinifera]","gi|359481108|ref|XM_002267110.2|","PREDICTED: Vitis vinifera uncharacterized LOC100258103 (LOC100258103), mRNA","sp|Q8LB17|Y3846_ARATH","Uncharacterized protein At3g58460 OS=Arabidopsis thaliana GN=At3g58460 PE=1 SV=2","COG0705","Uncharacterized membrane protein (homolog of Drosophila rhomboid)","K09651","ppp:PHYPADRAFT_205013","rhomboid domain-containing protein 1 [EC:3.4.21.-]","-","GO:0004252//serine-type endopeptidase activity","GO:0016021//integral to membrane"]
[69,"CSE_Unigene13370","SW_CL7049_Contig2","+","-","+(Mostly)",927,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.110396,"d":"0.110"},{"v":0,"d":"0.0000"},"gi|359481387|ref|XP_002281908.2|","PREDICTED: translin [Vitis vinifera]","gi|359481386|ref|XM_002281872.2|","PREDICTED: Vitis vinifera translin-like (LOC100248220), mRNA","-","-","COG2178","Predicted RNA-binding protein of the translin family","-","-","-","GO:0009220//pyrimidine ribonucleotide biosynthetic process","GO:0043565//sequence-specific DNA binding","GO:0005829//cytosol;GO:0009570//chloroplast stroma;GO:0005634//nucleus"]
[70,"CSE_Unigene14510","SW_CL3839_Contig2","+","-","+(Mostly)",660,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.325362,"d":"0.325"},{"v":0.371503,"d":"0.3715"},"gi|225440059|ref|XP_002282285.1|","PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Vitis vinifera] >gi|297741641|emb|CBI32773.3| unnamed protein product [Vitis vinifera]","gi|225440058|ref|XM_002282249.1|","PREDICTED: Vitis vinifera thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like (LOC100255100), mRNA","sp|Q9LVV5|TL15B_ARATH","Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana GN=At5g52970 PE=1 SV=2","-","-","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0009793//embryo development ending in seed dormancy;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015995//chlorophyll biosynthetic process;GO:0016226//iron-sulfur cluster assembly;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0006364//rRNA processing;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","-","GO:0009543//chloroplast thylakoid lumen"]
[71,"CSE_Unigene12823","SW_Unigene17095","+","-","+(Mostly)",2196,{"v":0.995,"d":"99.50%"},12,9,3,{"v":0.0955444,"d":"0.096"},{"v":0.000159259,"d":"0.0002"},"gi|225439600|ref|XP_002265851.1|","PREDICTED: uncharacterized protein LOC100265424 [Vitis vinifera] >gi|297735584|emb|CBI18078.3| unnamed protein product [Vitis vinifera]","gi|225439599|ref|XM_002265815.1|","PREDICTED: Vitis vinifera uncharacterized LOC100265424 (LOC100265424), mRNA","-","-","COG1181","D-alanine-D-alanine ligase and related ATP-grasp enzymes","-","-","-","GO:0009252//peptidoglycan biosynthetic process","GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0008716//D-alanine-D-alanine ligase activity","GO:0005618//cell wall;GO:0009507//chloroplast"]
[72,"CSE_Unigene13954","SW_Unigene11651","+","-","+(Mostly)",960,{"v":0.997,"d":"99.70%"},3,2,1,{"v":0.166494,"d":"0.166"},{"v":0.141164,"d":"0.1412"},"gi|225441910|ref|XP_002284489.1|","PREDICTED: S-formylglutathione hydrolase isoform 1 [Vitis vinifera] >gi|297739618|emb|CBI29800.3| unnamed protein product [Vitis vinifera]","gi|349725949|emb|FQ393901.1|","Vitis vinifera clone SS0AFA23YJ20","sp|Q8LAS8|SFGH_ARATH","S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2","COG0627","Predicted esterase","K01070","vvi:100253701","S-formylglutathione hydrolase [EC:3.1.2.12]","GO:0046686//response to cadmium ion;GO:0046294//formaldehyde catabolic process","GO:0004091//carboxylesterase activity;GO:0018738//S-formylglutathione hydrolase activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0048046//apoplast;GO:0009536//plastid"]
[73,"CSE_Unigene18885","SW_Unigene17368","+","-","+(Mostly)",1395,{"v":0.985,"d":"98.50%"},15,8,7,{"v":0.30708,"d":"0.307"},{"v":0.0224477,"d":"0.0224"},"gi|225441840|ref|XP_002278289.1|","PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Vitis vinifera] >gi|297739656|emb|CBI29838.3| unnamed protein product [Vitis vinifera]","gi|225441839|ref|XM_002278253.1|","PREDICTED: Vitis vinifera cytoplasmic tRNA 2-thiolation protein 2-like (LOC100252179), mRNA","sp|O65628|CTU2_ARATH","Cytoplasmic tRNA 2-thiolation protein 2 OS=Arabidopsis thaliana GN=CTU2 PE=2 SV=3","-","-","K14169","vvi:100252179","cytoplasmic tRNA 2-thiolation protein 2","GO:0008033//tRNA processing","-","GO:0005737//cytoplasm"]
[74,"CSE_Unigene19088","SW_Unigene204","+","-","+(Mostly)",690,{"v":0.99,"d":"99.00%"},7,7,"NA",{"v":0,"d":"0.000"},"NA","gi|225441811|ref|XP_002283887.1|","PREDICTED: ABC transporter I family member 1 [Vitis vinifera] >gi|147811123|emb|CAN61350.1| hypothetical protein VITISV_021799 [Vitis vinifera] >gi|297739670|emb|CBI29852.3| unnamed protein product [Vitis vinifera]","gi|359481607|ref|XM_002283851.2|","PREDICTED: Vitis vinifera ABC transporter I family member 1-like (LOC100267504), mRNA","sp|Q9C8T1|AB1I_ARATH","ABC transporter I family member 1 OS=Arabidopsis thaliana GN=ABCI1 PE=2 SV=1","COG4133","ABC-type transport system involved in cytochrome c biogenesis, ATPase component","K05658","sbi:SORBI_07g023730","ATP-binding cassette, subfamily B (MDR/TAP), member 1","GO:0006810//transport;GO:0017004//cytochrome complex assembly;GO:0006200//ATP catabolic process","GO:0015439//heme-transporting ATPase activity;GO:0005524//ATP binding","GO:0030288//outer membrane-bounded periplasmic space;GO:0005886//plasma membrane"]
[75,"CSE_Unigene12649","SW_CL7383_Contig2","+","-","+(Mostly)",513,{"v":0.992,"d":"99.20%"},4,1,3,{"v":1.15779,"d":"1.158"},{"v":0.72433,"d":"0.7243"},"gi|225441742|ref|XP_002283156.1|","PREDICTED: uncharacterized protein LOC100245318 [Vitis vinifera] >gi|297739700|emb|CBI29882.3| unnamed protein product [Vitis vinifera]","gi|359481822|ref|XM_002283120.2|","PREDICTED: Vitis vinifera uncharacterized LOC100245318 (LOC100245318), mRNA","-","-","-","-","K11663","vvi:100245318","zinc finger HIT domain-containing protein 1","GO:0042742//defense response to bacterium;GO:0048638//regulation of developmental growth;GO:0006338//chromatin remodeling;GO:0009909//regulation of flower development","GO:0042802//identical protein binding","GO:0005634//nucleus;GO:0009536//plastid"]
[76,"CSE_Unigene12564","SW_Unigene8321","+","-","+(Mostly)",666,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225441601|ref|XP_002281697.1|","PREDICTED: eukaryotic translation initiation factor 4E type 3 [Vitis vinifera] >gi|297739767|emb|CBI29949.3| unnamed protein product [Vitis vinifera]","gi|349715819|emb|FQ387111.1|","Vitis vinifera clone SS0AEB27YK16","sp|A3RCV9|IF4E3_WHEAT","Eukaryotic translation initiation factor NCBP OS=Triticum aestivum GN=NCBP PE=2 SV=1","COG5053","Translation initiation factor 4E (eIF-4E)","K03259","vvi:100258939","translation initiation factor 4E","GO:0006413//translational initiation;GO:0006417//regulation of translation","GO:0003743//translation initiation factor activity","GO:0005737//cytoplasm"]
[77,"CSE_Unigene11655","SW_CL2408_Contig1","+","-","+(Mostly)",759,{"v":0.991,"d":"99.10%"},7,5,2,{"v":0.138795,"d":"0.139"},{"v":0.0149793,"d":"0.0150"},"gi|359481865|ref|XP_002280176.2|","PREDICTED: DNA-3-methyladenine glycosylase [Vitis vinifera] >gi|297739818|emb|CBI30000.3| unnamed protein product [Vitis vinifera]","gi|359481864|ref|XM_002280140.2|","PREDICTED: Vitis vinifera DNA-3-methyladenine glycosylase-like (LOC100250307), mRNA","sp|Q39147|3MG_ARATH","DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana GN=MAG PE=2 SV=1","COG2094","3-methyladenine DNA glycosylase","K03652","rcu:RCOM_0278080","DNA-3-methyladenine glycosylase [EC:3.2.2.21]","GO:0006284//base-excision repair","GO:0052821//DNA-7-methyladenine glycosylase activity;GO:0003677//DNA binding;GO:0008725//DNA-3-methyladenine glycosylase activity;GO:0043916//DNA-7-methylguanine glycosylase activity;GO:0052822//DNA-3-methylguanine glycosylase activity","GO:0009536//plastid"]
[78,"CSE_Unigene12532","SW_Unigene23485","+","-","+(Mostly)",705,{"v":0.993,"d":"99.30%"},5,2,3,{"v":0.430428,"d":"0.430"},{"v":0.31139,"d":"0.3114"},"gi|225441393|ref|XP_002278312.1|","PREDICTED: uncharacterized protein LOC100241760 [Vitis vinifera] >gi|297739859|emb|CBI30041.3| unnamed protein product [Vitis vinifera]","gi|359482188|ref|XM_002278276.2|","PREDICTED: Vitis vinifera uncharacterized LOC100241760 (LOC100241760), mRNA","sp|O48529|STR9_ARATH","Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1","-","-","-","-","-","GO:0019684//photosynthesis, light reaction;GO:0010103//stomatal complex morphogenesis;GO:0019344//cysteine biosynthetic process","-","GO:0009535//chloroplast thylakoid membrane"]
[79,"CSE_Unigene19420","SW_Unigene15747","+","-","+(Mostly)",5118,{"v":0.991,"d":"99.10%"},41,20,21,{"v":0.345704,"d":"0.346"},{"v":0.000353334,"d":"0.0004"},"gi|297739996|emb|CBI30178.3|","unnamed protein product [Vitis vinifera]","gi|359482277|ref|XM_003632700.1|","PREDICTED: Vitis vinifera HEAT repeat-containing protein 7A homolog (LOC100243631), mRNA","-","-","-","-","-","-","-","GO:0006486//protein glycosylation","-","GO:0005634//nucleus"]
[80,"CSE_Unigene443","SW_Unigene15373","+","-","+(Mostly)",462,{"v":0.985,"d":"98.50%"},7,4,3,{"v":0.235405,"d":"0.235"},{"v":0.0629411,"d":"0.0629"},"gi|225440888|ref|XP_002282626.1|","PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Vitis vinifera] >gi|297740113|emb|CBI30295.3| unnamed protein product [Vitis vinifera]","gi|225440887|ref|XM_002282590.1|","PREDICTED: Vitis vinifera iron-sulfur assembly protein IscA-like 2, mitochondrial (LOC100244143), mRNA","sp|Q8LCY2|ISAM2_ARATH","Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2","COG0316","Uncharacterized conserved protein","K13628","smo:SELMODRAFT_173619","iron-sulfur cluster assembly protein","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0016226//iron-sulfur cluster assembly","GO:0051536//iron-sulfur cluster binding;GO:0005198//structural molecule activity","GO:0005739//mitochondrion"]
[81,"CSE_Unigene12705","SW_Unigene14275","+","-","+(Mostly)",855,{"v":0.995,"d":"99.50%"},4,1,3,{"v":1.01428,"d":"1.014"},{"v":0.684813,"d":"0.6848"},"gi|225440878|ref|XP_002282544.1|","PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Vitis vinifera]","gi|359481600|ref|XM_002282508.2|","PREDICTED: Vitis vinifera heme-binding-like protein At3g10130, chloroplastic-like (LOC100256254), mRNA","sp|Q9SR77|HBPL1_ARATH","Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=1 SV=1","-","-","-","-","-","-","-","GO:0009535//chloroplast thylakoid membrane;GO:0010287//plastoglobule"]
[82,"CSE_CL835_Contig2","SW_CL6770_Contig1","+","-","+(Mostly)",786,{"v":0.989,"d":"98.90%"},9,2,7,{"v":1.31291,"d":"1.313"},{"v":0.943873,"d":"0.9439"},"gi|297740209|emb|CBI30391.3|","unnamed protein product [Vitis vinifera]","gi|359482054|ref|XM_002274789.2|","PREDICTED: Vitis vinifera methyltransferase-like protein 21C-like (LOC100263030), mRNA","-","-","COG3897","Predicted methyltransferase","-","-","-","-","-","GO:0005737//cytoplasm"]
[83,"CSE_Unigene13896","SW_Unigene22427","+","-","+(Mostly)",1425,{"v":0.996,"d":"99.60%"},6,2,4,{"v":0.812958,"d":"0.813"},{"v":0.870963,"d":"0.8710"},"gi|225440640|ref|XP_002279057.1|","PREDICTED: BTB/POZ domain-containing protein At3g09030-like [Vitis vinifera]","gi|123719966|emb|AM439472.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X196164.19, clone ENTAV 115","sp|Q9S7R7|Y3903_ARATH","BTB/POZ domain-containing protein At3g09030 OS=Arabidopsis thaliana GN=At3g09030 PE=2 SV=1","-","-","K15074","pop:POPTR_593739","BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein","GO:0051260//protein homooligomerization;GO:0006813//potassium ion transport","GO:0005249//voltage-gated potassium channel activity","GO:0008076//voltage-gated potassium channel complex;GO:0005634//nucleus"]
[84,"CSE_Unigene321","SW_CL5175_Contig1","+","-","+(Mostly)",957,{"v":0.998,"d":"99.80%"},2,"NA",2,"NA","NA","gi|225440382|ref|XP_002267244.1|","PREDICTED: p21-activated protein kinase-interacting protein 1-like [Vitis vinifera] >gi|297740361|emb|CBI30543.3| unnamed protein product [Vitis vinifera]","gi|359481774|ref|XM_002267208.2|","PREDICTED: Vitis vinifera p21-activated protein kinase-interacting protein 1-like (LOC100257947), mRNA","sp|Q9SX31|PERK9_ARATH","Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1","COG2319","FOG: WD40 repeat","K14830","vvi:100257947","protein MAK11","GO:0016310//phosphorylation","GO:0016301//kinase activity;GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0005737//cytoplasm;GO:0005730//nucleolus;GO:0005834//heterotrimeric G-protein complex;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[85,"CSE_Unigene17468","SW_Unigene7702","+","-","+(Mostly)",1380,{"v":0.991,"d":"99.10%"},12,4,8,{"v":0.94959,"d":"0.950"},{"v":0.752111,"d":"0.7521"},"gi|359483160|ref|XP_002264393.2|","PREDICTED: uncharacterized protein LOC100241596 [Vitis vinifera] >gi|298204672|emb|CBI25170.3| unnamed protein product [Vitis vinifera]","gi|359483159|ref|XM_002264357.2|","PREDICTED: Vitis vinifera uncharacterized LOC100241596 (LOC100241596), mRNA","-","-","COG0859","ADP-heptose:LPS heptosyltransferase","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0009773//photosynthetic electron transport in photosystem I;GO:0016117//carotenoid biosynthetic process;GO:0010207//photosystem II assembly","GO:0016757//transferase activity, transferring glycosyl groups","GO:0010598//NAD(P)H dehydrogenase complex (plastoquinone);GO:0009535//chloroplast thylakoid membrane"]
[86,"CSE_Unigene12601","SW_CL1748_Contig2","+","-","+(Mostly)",801,{"v":0.993,"d":"99.30%"},6,2,4,{"v":0.557773,"d":"0.558"},{"v":0.390612,"d":"0.3906"},"gi|225441957|ref|XP_002264196.1|","PREDICTED: uncharacterized protein C23H3.12c [Vitis vinifera] >gi|297742919|emb|CBI35786.3| unnamed protein product [Vitis vinifera]","gi|359482499|ref|XM_002264160.2|","PREDICTED: Vitis vinifera uncharacterized LOC100256558 (LOC100256558), mRNA","-","-","-","-","-","-","-","-","-","GO:0005774//vacuolar membrane;GO:0009536//plastid;GO:0005739//mitochondrion"]
[87,"CSE_Unigene16118","SW_Unigene15487","+","-","+(Mostly)",771,{"v":0.99,"d":"99.00%"},8,7,1,{"v":0.0539851,"d":"0.054"},{"v":0.000708803,"d":"0.0007"},"gi|225442396|ref|XP_002282496.1|","PREDICTED: putative mediator of RNA polymerase II transcription subunit 6 [Vitis vinifera]","gi|349716216|emb|FQ397198.1|","Vitis vinifera clone SS0AEB7YI15","sp|F4IXJ7|MED6_ARATH","Mediator of RNA polymerase II transcription subunit 6 OS=Arabidopsis thaliana GN=MED6 PE=1 SV=1","COG5097","RNA polymerase II transcriptional regulation mediator","K15128","vvi:100253150","mediator of RNA polymerase II transcription subunit 6","GO:0006357//regulation of transcription from RNA polymerase II promoter","GO:0001104//RNA polymerase II transcription cofactor activity","GO:0016592//mediator complex"]
[88,"CSE_Unigene19199","SW_Unigene6055","+","-","+(Mostly)",987,{"v":0.968,"d":"96.80%"},23,9,14,{"v":0.554058,"d":"0.554"},{"v":0.228047,"d":"0.2280"},"gi|297743320|emb|CBI36187.3|","unnamed protein product [Vitis vinifera]","gi|359482630|ref|XM_002280415.2|","PREDICTED: Vitis vinifera uncharacterized LOC100266851 (LOC100266851), mRNA","-","-","-","-","K10803","vvi:100266851","DNA-repair protein XRCC1","GO:0006266//DNA ligation;GO:1901969//positive regulation of polynucleotide 3'-phosphatase activity;GO:0006281//DNA repair;GO:1901972//positive regulation of DNA-5-methylcytosine glycosylase activity;GO:0080111//DNA demethylation","GO:0010385//double-stranded methylated DNA binding;GO:0003713//transcription coactivator activity","GO:0005634//nucleus"]
[89,"CSE_Unigene15214","SW_Unigene15725","+","-","+(Mostly)",1152,{"v":0.989,"d":"98.90%"},13,{"v":5.76861,"d":"6"},{"v":7.23139,"d":"7"},{"v":0.446294,"d":"0.446"},{"v":0.0995902,"d":"0.0996"},"gi|225442892|ref|XP_002263706.1|","PREDICTED: haloalkane dehalogenase [Vitis vinifera] >gi|297743495|emb|CBI36362.3| unnamed protein product [Vitis vinifera]","gi|359482381|ref|XM_002263670.2|","PREDICTED: Vitis vinifera haloalkane dehalogenase-like (LOC100250971), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","-","-","-","GO:0016556//mRNA modification;GO:0006468//protein phosphorylation","GO:0004674//protein serine/threonine kinase activity;GO:0018786;GO:0005524//ATP binding","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[90,"CSE_CL5590_Contig2","SW_CL5993_Contig3","+","-","+(Mostly)",546,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.344843,"d":"0.345"},{"v":0.382617,"d":"0.3826"},"gi|225443539|ref|XP_002277179.1|","PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Vitis vinifera]","gi|225443538|ref|XM_002277143.1|","PREDICTED: Vitis vinifera D-tyrosyl-tRNA(Tyr) deacylase-like (LOC100252068), mRNA","-","-","COG1490","D-Tyr-tRNAtyr deacylase","K07560","vvi:100252068","D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]","GO:0019478//D-amino acid catabolic process","GO:0004812//aminoacyl-tRNA ligase activity;GO:0016788//hydrolase activity, acting on ester bonds","GO:0005737//cytoplasm"]
[91,"CSE_Unigene20388","SW_Unigene8134","+","-","+(Mostly)",1998,{"v":0.991,"d":"99.10%"},17,9,8,{"v":0.339948,"d":"0.340"},{"v":0.0248811,"d":"0.0249"},"gi|225463376|ref|XP_002271571.1|","PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera] >gi|297740629|emb|CBI30811.3| unnamed protein product [Vitis vinifera]","gi|225463375|ref|XM_002271535.1|","PREDICTED: Vitis vinifera uncharacterized LOC100251997 (LOC100251997), mRNA","sp|O64765|UAP1_ARATH","Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1","COG0806","RimM protein, required for 16S rRNA processing","K02860","olu:OSTLU_38467","16S rRNA processing protein RimM","GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0006364//rRNA processing;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0051607//defense response to virus;GO:0043085//positive regulation of catalytic activity","GO:0043022//ribosome binding","GO:0005840//ribosome;GO:0009507//chloroplast"]
[92,"CSE_Unigene13926","SW_Unigene22025","+","-","+(Mostly)",864,{"v":0.997,"d":"99.70%"},3,2,1,{"v":0.140237,"d":"0.140"},{"v":0.113149,"d":"0.1131"},"gi|297740671|emb|CBI30853.3|","unnamed protein product [Vitis vinifera]","gi|359483855|ref|XM_002276099.2|","PREDICTED: Vitis vinifera uncharacterized LOC100248605 (LOC100248605), mRNA","sp|Q8H124|Y2446_ARATH","Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1","COG0702","Predicted nucleoside-diphosphate-sugar epimerases","-","-","-","GO:0010264//myo-inositol hexakisphosphate biosynthetic process","GO:0000166//nucleotide binding","GO:0010287//plastoglobule;GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane;GO:0005739//mitochondrion"]
[93,"CSE_Unigene19601","SW_Unigene5751","+","-","+(Mostly)",1530,{"v":0.994,"d":"99.40%"},9,3,6,{"v":0.506398,"d":"0.506"},{"v":0.268263,"d":"0.2683"},"gi|359483911|ref|XP_002272288.2|","PREDICTED: uncharacterized protein LOC100251522 [Vitis vinifera] >gi|297740769|emb|CBI30951.3| unnamed protein product [Vitis vinifera]","gi|359483910|ref|XM_002272252.2|","PREDICTED: Vitis vinifera uncharacterized LOC100251522 (LOC100251522), mRNA","-","-","-","-","-","-","-","GO:0042793//transcription from plastid promoter;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0008283//cell proliferation","-","GO:0009508//plastid chromosome;GO:0009507//chloroplast;GO:0005634//nucleus"]
[94,"CSE_Unigene12414","SW_Unigene8731","+","-","+(Mostly)",891,{"v":0.998,"d":"99.80%"},2,1,1,{"v":0.32915,"d":"0.329"},{"v":0.373403,"d":"0.3734"},"gi|225466968|ref|XP_002267887.1|","PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Vitis vinifera]","gi|225466967|ref|XM_002267851.1|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase B-like (LOC100247841), mRNA","sp|Q41651|CYPB_VICFA","Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K03768","sbi:SORBI_09g000350","peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization","GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0031977//thylakoid lumen;GO:0009507//chloroplast"]
[95,"CSE_Unigene15439","SW_Unigene12665","+","-","+(Mostly)",621,{"v":0.984,"d":"98.40%"},10,7,3,{"v":0.163696,"d":"0.164"},{"v":0.00698643,"d":"0.0070"},"gi|225444850|ref|XP_002281014.1|","PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]","gi|359484464|ref|XM_002280978.2|","PREDICTED: Vitis vinifera uncharacterized LOC100242371 (LOC100242371), mRNA","-","-","COG0346","Lactoylglutathione lyase and related lyases","K08234","ath:AT5G57040","glyoxylase I family protein","GO:0008152//metabolic process","GO:0016829//lyase activity","GO:0009507//chloroplast"]
[96,"CSE_Unigene18633","SW_CL7537_Contig2","+","-","+(Mostly)",591,{"v":0.97,"d":"97.00%"},18,{"v":4.53371,"d":"5"},{"v":13.4663,"d":"13"},{"v":0.862209,"d":"0.862"},{"v":0.766208,"d":"0.7662"},"gi|297738639|emb|CBI27884.3|","unnamed protein product [Vitis vinifera]","gi|349703400|emb|FQ383363.1|","Vitis vinifera clone SS0ABG21YK02","sp|Q8L4M1|DWA1_ARATH","WD repeat-containing protein DWA1 OS=Arabidopsis thaliana GN=DWA1 PE=1 SV=1","COG2319","FOG: WD40 repeat","K13175","vvi:100244028","THO complex subunit 6","GO:0009788//negative regulation of abscisic acid mediated signaling pathway;GO:0048608//reproductive structure development;GO:0016567//protein ubiquitination;GO:0010100//negative regulation of photomorphogenesis;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0006281//DNA repair","GO:0005515//protein binding;GO:0008026//ATP-dependent helicase activity;GO:0003676//nucleic acid binding;GO:0005524//ATP binding","GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005737//cytoplasm;GO:0005634//nucleus"]
[97,"CSE_Unigene17804","SW_Unigene16110","+","-","+(Mostly)",1500,{"v":0.993,"d":"99.30%"},10,5,5,{"v":0.296911,"d":"0.297"},{"v":0.0566065,"d":"0.0566"},"gi|359484508|ref|XP_002282779.2|","PREDICTED: xaa-Pro dipeptidase-like [Vitis vinifera] >gi|297738698|emb|CBI27943.3| unnamed protein product [Vitis vinifera]","gi|359484507|ref|XM_002282743.2|","PREDICTED: Vitis vinifera xaa-Pro dipeptidase-like (LOC100244094), mRNA","-","-","COG0006","Xaa-Pro aminopeptidase","K14213","vvi:100244094","Xaa-Pro dipeptidase [EC:3.4.13.9]","GO:0009987//cellular process","GO:0016805//dipeptidase activity;GO:0030145//manganese ion binding;GO:0004177//aminopeptidase activity","GO:0009536//plastid"]
[98,"CSE_Unigene14041","SW_CL8503_Contig1","+","-","+(Mostly)",858,{"v":0.988,"d":"98.80%"},10,4,6,{"v":0.444193,"d":"0.444"},{"v":0.178852,"d":"0.1789"},"gi|225445152|ref|XP_002284033.1|","PREDICTED: 7SK snRNA methylphosphate capping enzyme [Vitis vinifera] >gi|297738783|emb|CBI28028.3| unnamed protein product [Vitis vinifera]","gi|359484560|ref|XM_002283997.2|","PREDICTED: Vitis vinifera 7SK snRNA methylphosphate capping enzyme-like (LOC100261137), mRNA","sp|Q6NPC9|BIN3D_ARATH","Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana GN=At5g51130 PE=2 SV=1","-","-","K15190","vvi:100261137","7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]","GO:0009640//photomorphogenesis;GO:0010388//cullin deneddylation;GO:0016567//protein ubiquitination;GO:0016579//protein deubiquitination;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0016571//histone methylation","GO:0008276//protein methyltransferase activity","GO:0005737//cytoplasm"]
[99,"CSE_Unigene13886","SW_Unigene15726","+","-","+(Mostly)",690,{"v":0.993,"d":"99.30%"},5,3,2,{"v":0.229078,"d":"0.229"},{"v":0.01605,"d":"0.0161"},"gi|359484837|ref|XP_003633171.1|","PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like isoform 2 [Vitis vinifera] >gi|297743643|emb|CBI36526.3| unnamed protein product [Vitis vinifera]","gi|359484836|ref|XM_003633123.1|","PREDICTED: Vitis vinifera 26S proteasome non-ATPase regulatory subunit 9-like, transcript variant 2 (LOC100258659), mRNA","-","-","COG0265","Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain","K06693","vvi:100258659","26S proteasome non-ATPase regulatory subunit 9","GO:0043161//proteasomal ubiquitin-dependent protein catabolic process;GO:0051510//regulation of unidimensional cell growth;GO:0035556//intracellular signal transduction;GO:0043248//proteasome assembly;GO:0051788//response to misfolded protein;GO:0042023//DNA endoreduplication","-","GO:0005838//proteasome regulatory particle"]
[100,"CSE_Unigene17303","SW_Unigene8078","+","-","+(Mostly)",1071,{"v":0.989,"d":"98.90%"},12,8,4,{"v":0.162527,"d":"0.163"},{"v":0.00255072,"d":"0.0026"},"gi|225445772|ref|XP_002273237.1|","PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera] >gi|297743697|emb|CBI36580.3| unnamed protein product [Vitis vinifera]","gi|359484806|ref|XM_002273201.2|","PREDICTED: Vitis vinifera uncharacterized LOC100251872 (LOC100251872), mRNA","sp|Q9LK03|PERK2_ARATH","Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3","-","-","K14305","smo:SELMODRAFT_74209","nuclear pore complex protein Nup43","GO:0006261//DNA-dependent DNA replication","GO:0005515//protein binding","GO:0005635//nuclear envelope;GO:0009507//chloroplast"]
[101,"CSE_Unigene18624","SW_Unigene21435","+","-","+(Mostly)",1116,{"v":0.989,"d":"98.90%"},9,5,4,{"v":0.237925,"d":"0.238"},{"v":0.03497,"d":"0.0350"},"gi|297735328|emb|CBI17768.3|","unnamed protein product [Vitis vinifera]","gi|359485033|ref|XM_002277484.2|","PREDICTED: Vitis vinifera xylose isomerase-like (LOC100254769), mRNA","sp|Q9FKK7|XYLA_ARATH","Xylose isomerase OS=Arabidopsis thaliana GN=XYLA PE=2 SV=2","COG2115","Xylose isomerase","K01805","vvi:100254769","xylose isomerase [EC:5.3.1.5]","GO:0006098//pentose-phosphate shunt;GO:0042732//D-xylose metabolic process","GO:0046872//metal ion binding;GO:0009045//xylose isomerase activity","GO:0005774//vacuolar membrane;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane"]
[102,"CSE_Unigene19330","SW_Unigene14749","+","-","+(Mostly)",2328,{"v":0.994,"d":"99.40%"},13,7,6,{"v":0.28722,"d":"0.287"},{"v":0.0250098,"d":"0.0250"},"gi|225445638|ref|XP_002265193.1|","PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera] >gi|297736046|emb|CBI24084.3| unnamed protein product [Vitis vinifera]","gi|359484927|ref|XM_002265157.2|","PREDICTED: Vitis vinifera cleavage stimulation factor subunit 3-like (LOC100262033), mRNA","-","-","COG5107","Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor","K14408","vvi:100262033","cleavage stimulation factor subunit 3","GO:0000278//mitotic cell cycle;GO:0031123//RNA 3'-end processing;GO:0009630//gravitropism;GO:0006397//mRNA processing;GO:0045892//negative regulation of transcription, DNA-dependent","GO:0003729//mRNA binding;GO:0005515//protein binding","GO:0005634//nucleus"]
[103,"CSE_CL6459_Contig3","SW_CL8306_Contig1","+","-","+(Mostly)",948,{"v":0.978,"d":"97.80%"},12,7,5,{"v":0.218975,"d":"0.219"},{"v":0.010245,"d":"0.0102"},"gi|225447482|ref|XP_002264683.1|","PREDICTED: uncharacterized protein LOC100249313 isoform 1 [Vitis vinifera] >gi|359485781|ref|XP_003633334.1| PREDICTED: uncharacterized protein LOC100249313 isoform 2 [Vitis vinifera]","gi|225447481|ref|XM_002264647.1|","PREDICTED: Vitis vinifera uncharacterized LOC100249313, transcript variant 1 (LOC100249313), mRNA","-","-","-","-","-","-","-","GO:0001510//RNA methylation","-","GO:0005730//nucleolus"]
[104,"CSE_CL6412_Contig1","SW_CL1690_Contig7","+","-","+(Mostly)",1065,{"v":0.976,"d":"97.60%"},20,10,10,{"v":0.368137,"d":"0.368"},{"v":0.0364731,"d":"0.0365"},"gi|359487457|ref|XP_002268254.2|","PREDICTED: protein N-terminal asparagine amidohydrolase-like [Vitis vinifera]","gi|359487456|ref|XM_002268218.2|","PREDICTED: Vitis vinifera protein N-terminal asparagine amidohydrolase-like (LOC100245927), mRNA","-","-","-","-","K14662","vvi:100245927","protein N-terminal asparagine amidohydrolase [EC:3.5.1.-]","GO:0006499//N-terminal protein myristoylation;GO:0009755//hormone-mediated signaling pathway","GO:0008418//protein-N-terminal asparagine amidohydrolase activity","GO:0009507//chloroplast"]
[105,"CSE_CL263_Contig1","SW_CL4377_Contig1","+","-","+(Mostly)",717,{"v":0.985,"d":"98.50%"},11,4,7,{"v":0.564622,"d":"0.565"},{"v":0.433326,"d":"0.4333"},"gi|225448890|ref|XP_002270872.1|","PREDICTED: uncharacterized protein SYNPCC7002_A1590 [Vitis vinifera] >gi|296085939|emb|CBI31380.3| unnamed protein product [Vitis vinifera]","gi|359486787|ref|XM_002270836.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249596 (LOC100249596), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus;GO:0009507//chloroplast"]
[106,"CSE_Unigene10369","SW_Unigene14031","+","-","+(Mostly)",690,{"v":0.98,"d":"98.00%"},8,3,5,{"v":0.62233,"d":"0.622"},{"v":0.378156,"d":"0.3782"},"gi|225449466|ref|XP_002283276.1|","PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis vinifera] >gi|296086215|emb|CBI31656.3| unnamed protein product [Vitis vinifera]","gi|359486793|ref|XM_002283240.2|","PREDICTED: Vitis vinifera ribosomal RNA large subunit methyltransferase E-like (LOC100247875), mRNA","-","-","COG0293","23S rRNA methylase","K14857","ppp:PHYPADRAFT_105018","AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0001510//RNA methylation","GO:0003676//nucleic acid binding;GO:0008168//methyltransferase activity","GO:0005737//cytoplasm"]
[107,"CSE_Unigene14683","SW_Unigene17119","+","-","+(Mostly)",1344,{"v":0.99,"d":"99.00%"},14,6,8,{"v":0.476443,"d":"0.476"},{"v":0.205794,"d":"0.2058"},"gi|297736340|emb|CBI24978.3|","unnamed protein product [Vitis vinifera]","gi|359487425|ref|XM_002271652.2|","PREDICTED: Vitis vinifera F-box/WD-40 repeat-containing protein At3g52030-like (LOC100243045), mRNA","sp|Q9SV01|FBW4_ARATH","F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana GN=At3g52030 PE=2 SV=2","-","-","K14963","ppp:PHYPADRAFT_56981","COMPASS component SWD3","-","-","GO:0044424//intracellular part"]
[108,"CSE_Unigene18903","SW_Unigene21941","+","-","+(Mostly)",1236,{"v":0.997,"d":"99.70%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225448765|ref|XP_002281688.1|","PREDICTED: macrophage erythroblast attacher [Vitis vinifera] >gi|297736449|emb|CBI25320.3| unnamed protein product [Vitis vinifera]","gi|225448764|ref|XM_002281652.1|","PREDICTED: Vitis vinifera macrophage erythroblast attacher-like (LOC100257054), mRNA","-","-","COG5109","Uncharacterized conserved protein, contains RING Zn-finger","-","-","-","-","-","GO:0005634//nucleus;GO:0005829//cytosol;GO:0009536//plastid"]
[109,"CSE_Unigene16064","SW_Unigene22323","+","-","+(Mostly)",1080,{"v":0.994,"d":"99.40%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|225448631|ref|XP_002274357.1|","PREDICTED: uncharacterized protein LOC100262145 [Vitis vinifera] >gi|297736518|emb|CBI25389.3| unnamed protein product [Vitis vinifera]","gi|359486348|ref|XM_002274321.2|","PREDICTED: Vitis vinifera uncharacterized LOC100262145 (LOC100262145), mRNA","-","-","COG0637","Predicted phosphatase/phosphohexomutase","-","-","-","GO:0008152//metabolic process","GO:0016787//hydrolase activity","GO:0009507//chloroplast"]
[110,"CSE_Unigene12514","SW_Unigene14911","+","-","+(Mostly)",1650,{"v":0.979,"d":"97.90%"},29,10,19,{"v":0.579664,"d":"0.580"},{"v":0.18343,"d":"0.1834"},"gi|359486480|ref|XP_002273379.2|","PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis vinifera]","gi|359486479|ref|XM_002273343.2|","PREDICTED: Vitis vinifera sister chromatid cohesion 1 protein 1-like (LOC100262148), mRNA","sp|Q9S7T7|SCC11_ARATH","Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana GN=SYN1 PE=2 SV=2","-","-","-","-","-","GO:0045132//meiotic chromosome segregation;GO:0006259//DNA metabolic process;GO:0007062//sister chromatid cohesion;GO:0007127//meiosis I;GO:0070192","-","GO:0043231//intracellular membrane-bounded organelle;GO:0005694//chromosome"]
[111,"CSE_CL7209_Contig1","SW_Unigene8802","+","-","+(Mostly)",555,{"v":0.993,"d":"99.30%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225465829|ref|XP_002264063.1|","PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Vitis vinifera] >gi|296087861|emb|CBI35117.3| unnamed protein product [Vitis vinifera]","gi|359487143|ref|XM_002264027.2|","PREDICTED: Vitis vinifera thioredoxin-like protein CITRX, chloroplastic (LOC100254862), mRNA","sp|Q9M7X9|CITRX_ARATH","Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=At3g06730 PE=1 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","K03671","bdi:100821992","thioredoxin 1","GO:0006662//glycerol ether metabolic process;GO:0022900//electron transport chain;GO:0006364//rRNA processing;GO:0045454//cell redox homeostasis;GO:0009658//chloroplast organization;GO:0006399//tRNA metabolic process;GO:0042793//transcription from plastid promoter;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0045036//protein targeting to chloroplast","GO:0047134//protein-disulfide reductase activity;GO:0009055//electron carrier activity;GO:0015035//protein disulfide oxidoreductase activity","GO:0009295//nucleoid;GO:0009579//thylakoid;GO:0009507//chloroplast"]
[112,"CSE_Unigene572","SW_Unigene14967","+","-","+(Mostly)",1413,{"v":0.98,"d":"98.00%"},16,7,9,{"v":0.565903,"d":"0.566"},{"v":0.276089,"d":"0.2761"},"gi|225450919|ref|XP_002284549.1|","PREDICTED: protein AUXIN RESPONSE 4 [Vitis vinifera]","gi|359487755|ref|XM_002284513.2|","PREDICTED: Vitis vinifera protein AUXIN RESPONSE 4-like (LOC100264948), mRNA","sp|Q9FZ33|AXR4_ARATH","Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana GN=AXR4 PE=1 SV=1","-","-","-","-","-","GO:0009612//response to mechanical stimulus;GO:0009926//auxin polar transport;GO:0009733//response to auxin stimulus","-","GO:0005774//vacuolar membrane;GO:0005634//nucleus;GO:0005783//endoplasmic reticulum;GO:0005739//mitochondrion"]
[113,"CSE_Unigene18823","SW_Unigene16035","+","-","+(Mostly)",1449,{"v":0.991,"d":"99.10%"},13,4,9,{"v":1.06865,"d":"1.069"},{"v":0.99375,"d":"0.9938"},"gi|296090243|emb|CBI40062.3|","unnamed protein product [Vitis vinifera]","gi|359488598|ref|XM_003633738.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262724 (LOC100262724), mRNA","-","-","-","-","K15031","aly:ARALYDRAFT_481036","transcription termination factor, mitochondrial","GO:0009658//chloroplast organization;GO:0009737//response to abscisic acid stimulus;GO:0009651//response to salt stress","-","GO:0005739//mitochondrion"]
[114,"CSE_CL6330_Contig1","SW_Unigene8491","+","-","+(Mostly)",1527,{"v":0.99,"d":"99.00%"},16,9,7,{"v":0.371852,"d":"0.372"},{"v":0.0563912,"d":"0.0564"},"gi|225452167|ref|XP_002264334.1|","PREDICTED: histone-lysine N-methyltransferase setd3 isoform 1 [Vitis vinifera]","gi|359488612|ref|XM_002264298.2|","PREDICTED: Vitis vinifera histone-lysine N-methyltransferase setd3-like, transcript variant 1 (LOC100255895), mRNA","sp|P94026|RBCMT_TOBAC","Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum GN=RBCMT PE=2 SV=1","-","-","K00592","aly:ARALYDRAFT_471564","[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]","-","-","GO:0009570//chloroplast stroma"]
[115,"CSE_Unigene16598","SW_Unigene19219","+","-","+(Mostly)",606,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|359487537|ref|XP_002282596.2|","PREDICTED: zinc finger matrin-type protein 2-like [Vitis vinifera] >gi|296089759|emb|CBI39578.3| unnamed protein product [Vitis vinifera]","gi|359487536|ref|XM_002282560.2|","PREDICTED: Vitis vinifera zinc finger matrin-type protein 2-like (LOC100263190), mRNA","-","-","-","-","K12848","vvi:100263190","U4/U6.U5 tri-snRNP component SNU23","-","GO:0003676//nucleic acid binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[116,"CSE_Unigene14468","SW_Unigene10629","+","-","+(Mostly)",564,{"v":0.986,"d":"98.60%"},8,5,3,{"v":0.267896,"d":"0.268"},{"v":0.0668787,"d":"0.0669"},"gi|147815337|emb|CAN67770.1|","hypothetical protein VITISV_010521 [Vitis vinifera]","gi|359488481|ref|XM_002270234.2|","PREDICTED: Vitis vinifera 50S ribosomal protein L27, chloroplastic-like (LOC100260093), mRNA","sp|Q9FLN4|RK27_ARATH","50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana GN=RPL27 PE=2 SV=1","COG0211","Ribosomal protein L27","K02899","vvi:100260093","large subunit ribosomal protein L27","GO:0006412//translation","GO:0003735//structural constituent of ribosome","GO:0005840//ribosome;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0009579//thylakoid"]
[117,"CSE_Unigene11588","SW_Unigene15092","+","-","+(Mostly)",1503,{"v":0.995,"d":"99.50%"},8,6,2,{"v":0.105644,"d":"0.106"},{"v":0.00348704,"d":"0.0035"},"gi|298204401|emb|CBI16881.3|","unnamed protein product [Vitis vinifera]","gi|359488306|ref|XM_002279088.2|","PREDICTED: Vitis vinifera tryptophan synthase beta chain 2-like (LOC100261704), mRNA","sp|P14671|TRPB1_ARATH","Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1","COG1350","Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB)","K06001","vvi:100261704","tryptophan synthase beta chain [EC:4.2.1.20]","GO:0000162//tryptophan biosynthetic process","GO:0052684//L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity;GO:0004834//tryptophan synthase activity;GO:0042803//protein homodimerization activity;GO:0030170//pyridoxal phosphate binding","GO:0009507//chloroplast"]
[118,"CSE_Unigene14969","SW_Unigene8799","+","-","+(Mostly)",1281,{"v":0.992,"d":"99.20%"},7,2,5,{"v":0.986152,"d":"0.986"},{"v":0.583424,"d":"0.5834"},"gi|225453238|ref|XP_002265039.1|","PREDICTED: protoheme IX farnesyltransferase, mitochondrial [Vitis vinifera] >gi|297734684|emb|CBI16735.3| unnamed protein product [Vitis vinifera]","gi|225453237|ref|XM_002265003.1|","PREDICTED: Vitis vinifera protoheme IX farnesyltransferase, mitochondrial-like (LOC100261621), mRNA","sp|O64886|COX10_ARATH","Protoheme IX farnesyltransferase, mitochondrial OS=Arabidopsis thaliana GN=COX10 PE=2 SV=4","COG0109","Polyprenyltransferase (cytochrome oxidase assembly factor)","K02257","vvi:100261621","protoheme IX farnesyltransferase [EC:2.5.1.-]","GO:0048034//heme O biosynthetic process","GO:0008495//protoheme IX farnesyltransferase activity","GO:0005886//plasma membrane;GO:0016021//integral to membrane;GO:0005739//mitochondrion"]
[119,"CSE_Unigene15644","SW_Unigene12705","+","-","+(Mostly)",954,{"v":0.991,"d":"99.10%"},9,5,4,{"v":0.327808,"d":"0.328"},{"v":0.0887446,"d":"0.0887"},"gi|225454083|ref|XP_002266457.1|","PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Vitis vinifera] >gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera]","gi|359489752|ref|XM_002266421.2|","PREDICTED: Vitis vinifera methionine adenosyltransferase 2 subunit beta-like, transcript variant 1 (LOC100246496), mRNA","-","-","COG1091","dTDP-4-dehydrorhamnose reductase","-","-","-","GO:0045226//extracellular polysaccharide biosynthetic process;GO:0055114//oxidation-reduction process","GO:0016740//transferase activity;GO:0000166//nucleotide binding;GO:0008831//dTDP-4-dehydrorhamnose reductase activity","-"]
[120,"CSE_CL1710_Contig1","SW_Unigene16889","+","-","+(Mostly)",747,{"v":0.992,"d":"99.20%"},6,3,3,{"v":0.269617,"d":"0.270"},{"v":0.115833,"d":"0.1158"},"gi|359489811|ref|XP_002275559.2|","PREDICTED: uncharacterized protein LOC100262014 [Vitis vinifera]","gi|359489810|ref|XM_002275523.2|","PREDICTED: Vitis vinifera uncharacterized LOC100262014 (LOC100262014), mRNA","-","-","-","-","-","-","-","-","-","GO:0005840//ribosome;GO:0005739//mitochondrion"]
[121,"CSE_Unigene17189","SW_CL2105_Contig2","+","-","+(Mostly)",2433,{"v":0.993,"d":"99.30%"},16,11,5,{"v":0.11354,"d":"0.114"},{"v":3.39498e-05,"d":"0.0000"},"gi|225454359|ref|XP_002276054.1|","PREDICTED: uncharacterized protein LOC100258534 [Vitis vinifera]","gi|359489819|ref|XM_002276018.2|","PREDICTED: Vitis vinifera uncharacterized LOC100258534 (LOC100258534), mRNA","-","-","-","-","-","-","-","-","-","GO:0005576//extracellular region;GO:0016020//membrane"]
[122,"CSE_Unigene16513","SW_Unigene14270","+","-","+(Mostly)",720,{"v":0.993,"d":"99.30%"},5,2,3,{"v":0.471498,"d":"0.471"},{"v":0.34508,"d":"0.3451"},"gi|225454436|ref|XP_002280302.1|","PREDICTED: exosome complex component RRP41 [Vitis vinifera] >gi|147867252|emb|CAN81194.1| hypothetical protein VITISV_022853 [Vitis vinifera] >gi|297745390|emb|CBI40470.3| unnamed protein product [Vitis vinifera]","gi|359489696|ref|XM_002280266.2|","PREDICTED: Vitis vinifera exosome complex component RRP41-like (LOC100265488), mRNA","sp|Q84T68|EXOS5_ORYSJ","Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica GN=RRP46 PE=1 SV=2","COG0689","RNase PH","K11600","vvi:100265488","exosome complex component RRP41","-","GO:0009022//tRNA nucleotidyltransferase activity;GO:0004527//exonuclease activity","-"]
[123,"CSE_Unigene9739","SW_Unigene10546","+","-","+(Mostly)",678,{"v":0.985,"d":"98.50%"},10,4,6,{"v":0.555609,"d":"0.556"},{"v":0.26002,"d":"0.2600"},"gi|359489578|ref|XP_003633945.1|","PREDICTED: molybdopterin biosynthesis protein CNX3-like [Vitis vinifera] >gi|297745480|emb|CBI40560.3| unnamed protein product [Vitis vinifera]","gi|359489577|ref|XM_003633897.1|","PREDICTED: Vitis vinifera molybdopterin biosynthesis protein CNX3-like (LOC100853557), mRNA","sp|Q39056|CNX3_ARATH","Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial OS=Arabidopsis thaliana GN=CNX3 PE=1 SV=1","COG0315","Molybdenum cofactor biosynthesis enzyme","K03639","vvi:100853557","molybdenum cofactor biosynthesis protein","GO:0006777//Mo-molybdopterin cofactor biosynthetic process","GO:0003824//catalytic activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[124,"CSE_Unigene17430","SW_Unigene22519","+","-","+(Mostly)",1968,{"v":0.985,"d":"98.50%"},23,11,12,{"v":0.373794,"d":"0.374"},{"v":0.0260917,"d":"0.0261"},"gi|225453772|ref|XP_002270342.1|","PREDICTED: ankyrin repeat and zinc finger domain-containing protein 1-like [Vitis vinifera]","gi|225453771|ref|XM_002270306.1|","PREDICTED: Vitis vinifera ankyrin repeat and zinc finger domain-containing protein 1-like (LOC100254117), mRNA","-","-","COG3064","Membrane protein involved in colicin uptake","K15271","mtr:MTR_7g075500","ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]","GO:0009630//gravitropism","-","GO:0009536//plastid"]
[125,"CSE_CL520_Contig1","SW_CL5247_Contig1","+","-","+(Mostly)",609,{"v":0.985,"d":"98.50%"},9,6,3,{"v":0.163995,"d":"0.164"},{"v":0.0100022,"d":"0.0100"},"gi|225470704|ref|XP_002263111.1|","PREDICTED: 3-hexulose-6-phosphate isomerase [Vitis vinifera] >gi|297741058|emb|CBI31789.3| unnamed protein product [Vitis vinifera]","gi|147771656|emb|AM431835.2|","Vitis vinifera contig VV78X267655.4, whole genome shotgun sequence","sp|Q6ZCX3|FH6_ORYSJ","Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2","COG0794","Predicted sugar phosphate isomerase involved in capsule formation","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0005975//carbohydrate metabolic process","GO:0030246//carbohydrate binding;GO:0016853//isomerase activity","-"]
[126,"CSE_Unigene14900","SW_Unigene16106","+","-","+(Mostly)",651,{"v":0.986,"d":"98.60%"},9,6,3,{"v":0.172701,"d":"0.173"},{"v":0.0119428,"d":"0.0119"},"gi|225455590|ref|XP_002269178.1|","PREDICTED: cysteine and histidine-rich domain-containing protein RAR1-like [Vitis vinifera]","gi|225455589|ref|XM_002269142.1|","PREDICTED: Vitis vinifera cysteine and histidine-rich domain-containing protein RAR1-like (LOC100246439), mRNA","sp|Q9SE33|RAR1_ARATH","Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana GN=RAR1 PE=1 SV=1","-","-","K13458","vvi:100246439","disease resistance protein","GO:0009626//plant-type hypersensitive response;GO:0009817//defense response to fungus, incompatible interaction;GO:0002679//respiratory burst involved in defense response;GO:0050821//protein stabilization;GO:0009816//defense response to bacterium, incompatible interaction","GO:0051879//Hsp90 protein binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[127,"CSE_Unigene16111","SW_Unigene10736","+","-","+(Mostly)",525,{"v":0.981,"d":"98.10%"},10,3,7,{"v":0.960342,"d":"0.960"},{"v":0.969265,"d":"0.9693"},"gi|225455677|ref|XP_002264722.1|","PREDICTED: uncharacterized protein LOC100261162 [Vitis vinifera] >gi|296084154|emb|CBI24542.3| unnamed protein product [Vitis vinifera]","gi|359490185|ref|XM_002264686.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261162 (LOC100261162), mRNA","-","-","-","-","-","-","-","GO:0035304//regulation of protein dephosphorylation;GO:0010207//photosystem II assembly;GO:0009902//chloroplast relocation;GO:0042742//defense response to bacterium;GO:0009773//photosynthetic electron transport in photosystem I;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","-","GO:0042651//thylakoid membrane;GO:0009534//chloroplast thylakoid"]
[128,"CSE_CL40_Contig1","SW_CL546_Contig3","+","-","+(Mostly)",1050,{"v":0.979,"d":"97.90%"},19,9,10,{"v":0.387878,"d":"0.388"},{"v":0.0571718,"d":"0.0572"},"gi|225454678|ref|XP_002269749.1|","PREDICTED: probable tocopherol O-methyltransferase, chloroplastic [Vitis vinifera]","gi|359489860|ref|XM_002269713.2|","PREDICTED: Vitis vinifera probable tocopherol O-methyltransferase, chloroplastic-like (LOC100242641), mRNA","sp|Q6ZIK0|GTOMC_ORYSJ","Probable tocopherol O-methyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE4 PE=2 SV=1","COG0500","SAM-dependent methyltransferases","K05928","vvi:100242641","tocopherol O-methyltransferase [EC:2.1.1.95]","GO:0032259//methylation;GO:0010189//vitamin E biosynthetic process","GO:0050342//tocopherol O-methyltransferase activity","-"]
[129,"CSE_Unigene14795","SW_Unigene13720","+","-","+(Mostly)",864,{"v":0.987,"d":"98.70%"},11,11,"NA",{"v":0,"d":"0.000"},"NA","gi|225454710|ref|XP_002271758.1|","PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Vitis vinifera] >gi|297737279|emb|CBI26480.3| unnamed protein product [Vitis vinifera]","gi|225454709|ref|XM_002271722.1|","PREDICTED: Vitis vinifera 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial-like (LOC100245886), mRNA","sp|Q9LVC8|COQ5_ARATH","2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1","COG2226","Methylase involved in ubiquinone/menaquinone biosynthesis","K06127","vvi:100245886","ubiquinone biosynthesis methyltransferase [EC:2.1.1.201]","GO:0006744//ubiquinone biosynthetic process;GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0005739//mitochondrion"]
[130,"CSE_Unigene15608","SW_CL7652_Contig2","+","-","+(Mostly)",900,{"v":0.993,"d":"99.30%"},6,2,4,{"v":0.617649,"d":"0.618"},{"v":0.43365,"d":"0.4337"},"gi|359490446|ref|XP_002275544.2|","PREDICTED: F-box protein At5g52880-like [Vitis vinifera] >gi|302143746|emb|CBI22607.3| unnamed protein product [Vitis vinifera]","gi|359490445|ref|XM_002275508.2|","PREDICTED: Vitis vinifera F-box protein At5g52880-like (LOC100257844), mRNA","sp|Q9FLX3|FB293_ARATH","F-box protein At5g52880 OS=Arabidopsis thaliana GN=At5g52880 PE=2 SV=1","-","-","-","-","-","-","-","GO:0043231//intracellular membrane-bounded organelle"]
[131,"CSE_Unigene1641","SW_Unigene13594","+","-","+(Mostly)",888,{"v":0.997,"d":"99.70%"},3,2,1,{"v":0.168881,"d":"0.169"},{"v":0.143873,"d":"0.1439"},"gi|225456794|ref|XP_002277650.1|","PREDICTED: protein CbbY [Vitis vinifera] >gi|297733644|emb|CBI14891.3| unnamed protein product [Vitis vinifera]","gi|225456793|ref|XM_002277614.1|","PREDICTED: Vitis vinifera protein CbbY-like (LOC100253525), mRNA","-","-","COG0637","Predicted phosphatase/phosphohexomutase","K00861","vvi:100261961","riboflavin kinase [EC:2.7.1.26]","GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006281//DNA repair;GO:0019684//photosynthesis, light reaction;GO:0010103//stomatal complex morphogenesis;GO:0006098//pentose-phosphate shunt;GO:0016117//carotenoid biosynthetic process;GO:0010027//thylakoid membrane organization;GO:0019252//starch biosynthetic process","GO:0004518//nuclease activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[132,"CSE_Unigene12908","SW_Unigene25392","+","-","+(Mostly)",642,{"v":0.995,"d":"99.50%"},3,1,2,{"v":0.576893,"d":"0.577"},{"v":0.522794,"d":"0.5228"},"gi|225457126|ref|XP_002283569.1|","PREDICTED: uncharacterized protein At5g50100, mitochondrial [Vitis vinifera] >gi|297733833|emb|CBI15080.3| unnamed protein product [Vitis vinifera]","gi|359491610|ref|XM_002283533.2|","PREDICTED: Vitis vinifera uncharacterized LOC100250132 (LOC100250132), mRNA","sp|Q8W485|Y5010_ARATH","Uncharacterized protein At5g50100, mitochondrial OS=Arabidopsis thaliana GN=At5g50100 PE=1 SV=1","COG3011","Uncharacterized protein conserved in bacteria","-","-","-","-","-","GO:0005739//mitochondrion"]
[133,"CSE_Unigene959","SW_Unigene13973","+","-","+(Mostly)",993,{"v":0.99,"d":"99.00%"},10,7,3,{"v":0.153225,"d":"0.153"},{"v":0.00498284,"d":"0.0050"},"gi|297733956|emb|CBI15203.3|","unnamed protein product [Vitis vinifera]","gi|359491696|ref|XM_002281794.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244920 (LOC100244920), mRNA","-","-","-","-","-","-","-","GO:0006457//protein folding;GO:0048573//photoperiodism, flowering;GO:0006950//response to stress","-","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0009507//chloroplast;GO:0005783//endoplasmic reticulum"]
[134,"CSE_Unigene10263","SW_Unigene25453","+","-","+(Mostly)",1152,{"v":0.997,"d":"99.70%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|297734253|emb|CBI15500.3|","unnamed protein product [Vitis vinifera]","gi|225456026|ref|XM_002277167.1|","PREDICTED: Vitis vinifera UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like (LOC100242239), mRNA","-","-","COG0707","UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase","K02563","vvi:100242239","UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]","GO:0009693//ethylene biosynthetic process;GO:0019277;GO:0030259//lipid glycosylation","GO:0050511//undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity;GO:0051991;GO:0030246//carbohydrate binding","GO:0005886//plasma membrane"]
[135,"CSE_Unigene14221","SW_Unigene13419","+","-","+(Mostly)",858,{"v":0.992,"d":"99.20%"},7,6,1,{"v":0.0737074,"d":"0.074"},{"v":0.00419274,"d":"0.0042"},"gi|225456280|ref|XP_002283559.1|","PREDICTED: cycloeucalenol cycloisomerase [Vitis vinifera] >gi|297734393|emb|CBI15640.3| unnamed protein product [Vitis vinifera]","gi|225456279|ref|XM_002283523.1|","PREDICTED: Vitis vinifera cycloeucalenol cycloisomerase-like (LOC100262783), mRNA","sp|Q9M643|CCI1_ARATH","Cycloeucalenol cycloisomerase OS=Arabidopsis thaliana GN=CPI1 PE=2 SV=1","-","-","K08246","vvi:100262783","cycloeucalenol cycloisomerase [EC:5.5.1.9]","GO:0016132//brassinosteroid biosynthetic process;GO:0006907//pinocytosis;GO:0009958//positive gravitropism;GO:0000910//cytokinesis;GO:0006084//acetyl-CoA metabolic process;GO:0007020//microtubule nucleation;GO:0016126//sterol biosynthetic process","GO:0047793//cycloeucalenol cycloisomerase activity","GO:0005739//mitochondrion;GO:0005783//endoplasmic reticulum"]
[136,"CSE_Unigene8942","SW_Unigene7589","+","-","+(Mostly)",1335,{"v":0.982,"d":"98.20%"},15,5,10,{"v":0.802833,"d":"0.803"},{"v":0.768617,"d":"0.7686"},"gi|359491815|ref|XP_002264379.2|","PREDICTED: UPF0176 protein pc0378-like [Vitis vinifera]","gi|359491814|ref|XM_002264343.2|","PREDICTED: Vitis vinifera UPF0176 protein pc0378-like (LOC100254727), mRNA","sp|F4I933|STR8_ARATH","Rhodanese-like domain-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=STR8 PE=2 SV=1","COG1054","Predicted sulfurtransferase","K10838","ota:Ot14g02880","xeroderma pigmentosum group C-complementing protein","GO:0016556//mRNA modification","-","GO:0005634//nucleus"]
[137,"CSE_CL2248_Contig2","SW_CL8234_Contig1","+","-","+(Mostly)",1173,{"v":0.997,"d":"99.70%"},4,1,3,{"v":0.796379,"d":"0.796"},{"v":0.608854,"d":"0.6089"},"gi|302141903|emb|CBI19106.3|","unnamed protein product [Vitis vinifera]","gi|123663052|emb|AM452645.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X209159.4, clone ENTAV 115","-","-","COG0500","SAM-dependent methyltransferases","K10770","vvi:100262638","alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]","GO:0032259//methylation;GO:0002098//tRNA wobble uridine modification","GO:0008175//tRNA methyltransferase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[138,"CSE_CL3535_Contig1","SW_Unigene15739","+","-","+(Mostly)",1698,{"v":0.996,"d":"99.60%"},7,3,4,{"v":0.495204,"d":"0.495"},{"v":0.288492,"d":"0.2885"},"gi|225459366|ref|XP_002285809.1|","PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera] >gi|302141924|emb|CBI19127.3| unnamed protein product [Vitis vinifera]","gi|359492829|ref|XM_002285773.2|","PREDICTED: Vitis vinifera tRNA modification GTPase MnmE-like (LOC100242149), mRNA","sp|Q9TLX6|MNME_CYACA","Probable tRNA modification GTPase mnmE OS=Cyanidium caldarium GN=mnmE PE=3 SV=1","COG0486","Predicted GTPase","K03650","vvi:100242149","tRNA modification GTPase [EC:3.6.-.-]","GO:0007264//small GTPase mediated signal transduction;GO:0006184//GTP catabolic process;GO:0006897//endocytosis;GO:0006400//tRNA modification","GO:0003924//GTPase activity;GO:0005525//GTP binding","GO:0005737//cytoplasm"]
[139,"CSE_CL5375_Contig3","SW_Unigene22325","+","-","+(Mostly)",1578,{"v":0.984,"d":"98.40%"},25,10,15,{"v":0.52965,"d":"0.530"},{"v":0.165636,"d":"0.1656"},"gi|225459083|ref|XP_002283809.1|","PREDICTED: argininosuccinate lyase [Vitis vinifera]","gi|225459082|ref|XM_002283773.1|","PREDICTED: Vitis vinifera argininosuccinate lyase-like (LOC100262660), mRNA","sp|P22675|ARLY_CHLRE","Argininosuccinate lyase OS=Chlamydomonas reinhardtii GN=ARG7 PE=2 SV=2","COG0165","Argininosuccinate lyase","K01755","vvi:100262660","argininosuccinate lyase [EC:4.3.2.1]","GO:0006164//purine nucleotide biosynthetic process;GO:0042450//arginine biosynthetic process via ornithine","GO:0004056//argininosuccinate lyase activity","GO:0009570//chloroplast stroma"]
[140,"CSE_Unigene13712","SW_Unigene4911","+","-","+(Mostly)",522,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.297289,"d":"0.297"},{"v":0.354829,"d":"0.3548"},"gi|225458988|ref|XP_002285581.1|","PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Vitis vinifera] >gi|147816413|emb|CAN77440.1| hypothetical protein VITISV_007403 [Vitis vinifera] >gi|302142114|emb|CBI19317.3| unnamed protein product [Vitis vinifera]","gi|359492987|ref|XM_002285545.2|","PREDICTED: Vitis vinifera ubiquitin-fold modifier-conjugating enzyme 1-like (LOC100264226), mRNA","sp|Q9SXC8|UFC1_ARATH","Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana GN=At1g27530 PE=2 SV=1","-","-","K12165","vvi:100264226","ufm1-conjugating enzyme 1","GO:0009407//toxin catabolic process;GO:0006944//cellular membrane fusion;GO:0016579//protein deubiquitination;GO:0048193//Golgi vesicle transport","GO:0004842//ubiquitin-protein ligase activity","GO:0009507//chloroplast"]
[141,"CSE_Unigene8169","SW_Unigene22659","+","-","+(Mostly)",648,{"v":0.991,"d":"99.10%"},6,3,3,{"v":0.361127,"d":"0.361"},0.1955,"gi|225458613|ref|XP_002284743.1|","PREDICTED: thioredoxin-like 4, chloroplastic [Vitis vinifera] >gi|302142316|emb|CBI19519.3| unnamed protein product [Vitis vinifera]","gi|359492034|ref|XM_002284707.2|","PREDICTED: Vitis vinifera thioredoxin-like 4, chloroplastic (LOC100267745), mRNA","sp|Q9C5C5|TRL4_ARATH","Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","K03671","sbi:SORBI_02g004850","thioredoxin 1","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0045454//cell redox homeostasis;GO:0006662//glycerol ether metabolic process;GO:0022900//electron transport chain","GO:0009055//electron carrier activity;GO:0015035//protein disulfide oxidoreductase activity","GO:0009570//chloroplast stroma"]
[142,"CSE_Unigene12343","SW_Unigene18374","+","-","+(Mostly)",1035,{"v":0.994,"d":"99.40%"},6,3,3,{"v":0.348435,"d":"0.348"},{"v":0.183521,"d":"0.1835"},"gi|225457745|ref|XP_002262900.1|","PREDICTED: uncharacterized protein C57A10.07 [Vitis vinifera] >gi|302142776|emb|CBI19979.3| unnamed protein product [Vitis vinifera]","gi|225457744|ref|XM_002262864.1|","PREDICTED: Vitis vinifera uncharacterized LOC100264380 (LOC100264380), mRNA","-","-","-","-","-","-","-","-","-","-"]
[143,"CSE_Unigene13399","SW_Unigene10836","+","-","+(Mostly)",1101,{"v":0.991,"d":"99.10%"},10,6,4,{"v":0.242123,"d":"0.242"},{"v":0.0274606,"d":"0.0275"},"gi|359491937|ref|XP_002274058.2|","PREDICTED: uncharacterized protein LOC100249580 [Vitis vinifera]","gi|359491936|ref|XM_002274022.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249580 (LOC100249580), mRNA","-","-","COG3540","Phosphodiesterase/alkaline phosphatase D","K01113","vvi:100249580","alkaline phosphatase D [EC:3.1.3.1]","-","-","GO:0016023//cytoplasmic membrane-bounded vesicle"]
[144,"CSE_Unigene9591","SW_Unigene24075","+","-","+(Mostly)",2103,{"v":0.989,"d":"98.90%"},21,9,12,{"v":0.481333,"d":"0.481"},{"v":0.13131,"d":"0.1313"},"gi|225460702|ref|XP_002267236.1|","PREDICTED: 5&apos;-3&apos; exonuclease-like [Vitis vinifera]","gi|359493097|ref|XM_002267200.2|","PREDICTED: Vitis vinifera 5'-3' exonuclease-like (LOC100250377), mRNA","-","-","COG0258","5'-3' exonuclease (including N-terminal domain of PolI)","K02335","cme:CMT462C","DNA polymerase I [EC:2.7.7.7]","GO:0008152//metabolic process","GO:0008409//5'-3' exonuclease activity;GO:0003677//DNA binding","GO:0005634//nucleus;GO:0009536//plastid"]
[145,"CSE_CL4269_Contig2","SW_Unigene17091","+","-","+(Mostly)",666,{"v":0.979,"d":"97.90%"},8,2,6,{"v":1.09754,"d":"1.098"},{"v":0.918553,"d":"0.9186"},"gi|359493583|ref|XP_002263666.2|","PREDICTED: peptide chain release factor 1-like [Vitis vinifera] >gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera]","gi|359493582|ref|XM_002263630.2|","PREDICTED: Vitis vinifera peptide chain release factor 1-like (LOC100244867), mRNA","-","-","COG1186","Protein chain release factor B","K02836","ppp:PHYPADRAFT_145938","peptide chain release factor 2","GO:0006783//heme biosynthetic process;GO:0006415//translational termination","GO:0003747//translation release factor activity","GO:0009507//chloroplast"]
[146,"CSE_CL4317_Contig1","SW_CL6969_Contig2","+","-","+(Mostly)",1011,{"v":0.994,"d":"99.40%"},6,2,4,{"v":0.578428,"d":"0.578"},{"v":0.405474,"d":"0.4055"},"gi|297735981|emb|CBI23955.3|","unnamed protein product [Vitis vinifera]","gi|359494022|ref|XM_002281433.2|","PREDICTED: Vitis vinifera F-box protein At3g62230-like (LOC100250424), mRNA","-","-","-","-","K03098","gmx:100500117","outer membrane lipoprotein Blc","GO:0006979//response to oxidative stress","-","GO:0009535//chloroplast thylakoid membrane;GO:0031977//thylakoid lumen"]
[147,"CSE_CL7552_Contig2","SW_Unigene23309","+","-","+(Mostly)",1053,{"v":0.995,"d":"99.50%"},5,2,3,{"v":0.455914,"d":"0.456"},{"v":0.331868,"d":"0.3319"},"gi|225461681|ref|XP_002285464.1|","PREDICTED: uncharacterized protein LOC100243613 [Vitis vinifera] >gi|302142893|emb|CBI20188.3| unnamed protein product [Vitis vinifera]","gi|225461680|ref|XM_002285428.1|","PREDICTED: Vitis vinifera uncharacterized LOC100243613 (LOC100243613), mRNA","sp|Q84JE8|ZDP_ARATH","Polynucleotide 3'-phosphatase ZDP OS=Arabidopsis thaliana GN=ZDP PE=1 SV=1","COG0241","Histidinol phosphatase and related phosphatases","K08073","vvi:100243613","bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]","GO:0006261//DNA-dependent DNA replication","GO:0003677//DNA binding;GO:0016787//hydrolase activity;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[148,"CSE_Unigene12717","SW_Unigene21691","+","-","+(Mostly)",546,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.388134,"d":"0.388"},{"v":0.404211,"d":"0.4042"},"gi|225461526|ref|XP_002285149.1|","PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis vinifera] >gi|302142967|emb|CBI20262.3| unnamed protein product [Vitis vinifera]","gi|359493825|ref|XM_002285113.2|","PREDICTED: Vitis vinifera 30S ribosomal protein S20, chloroplastic-like (LOC100265925), mRNA","sp|Q9ASV6|RR20_ARATH","30S ribosomal protein S20, chloroplastic OS=Arabidopsis thaliana GN=RPS20 PE=1 SV=1","COG0268","Ribosomal protein S20","K02968","vvi:100265925","small subunit ribosomal protein S20","GO:0006412//translation;GO:0006364//rRNA processing;GO:0015995//chlorophyll biosynthetic process","GO:0003723//RNA binding;GO:0003735//structural constituent of ribosome","GO:0005840//ribosome;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0016020//membrane"]
[149,"CSE_Unigene16412","SW_CL4385_Contig1","+","-","+(Mostly)",978,{"v":0.984,"d":"98.40%"},7,5,2,{"v":0.137419,"d":"0.137"},{"v":0.0144303,"d":"0.0144"},"gi|225461498|ref|XP_002285093.1|","PREDICTED: 3-hydroxybutyryl-CoA dehydrogenase [Vitis vinifera] >gi|302142978|emb|CBI20273.3| unnamed protein product [Vitis vinifera]","gi|359493832|ref|XM_002285057.2|","PREDICTED: Vitis vinifera 3-hydroxybutyryl-CoA dehydrogenase-like (LOC100246999), mRNA","sp|Q9ZPI6|AIM1_ARATH","Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1","COG1250","3-hydroxyacyl-CoA dehydrogenase","K00074","vvi:100246999","3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]","GO:0006631//fatty acid metabolic process;GO:0055114//oxidation-reduction process;GO:0006944//cellular membrane fusion;GO:0048193//Golgi vesicle transport;GO:0046685//response to arsenic-containing substance;GO:0009853//photorespiration","GO:0008691//3-hydroxybutyryl-CoA dehydrogenase activity;GO:0070403//NAD+ binding;GO:0003857//3-hydroxyacyl-CoA dehydrogenase activity","GO:0005777//peroxisome"]
[150,"CSE_CL5879_Contig2","SW_CL7812_Contig3","+","-","+(Mostly)",963,{"v":0.991,"d":"99.10%"},9,6,3,{"v":0.145282,"d":"0.145"},{"v":0.0059456,"d":"0.0059"},"gi|225461477|ref|XP_002282453.1|","PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera] >gi|302142996|emb|CBI20291.3| unnamed protein product [Vitis vinifera]","gi|47105537|gb|BT014122.1|","Lycopersicon esculentum clone 133228R, mRNA sequence","-","-","COG2302","Uncharacterized conserved protein, contains S4-like domain","-","-","-","-","GO:0003723//RNA binding","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[151,"CSE_Unigene14271","SW_Unigene6729","+","-","+(Mostly)",600,{"v":0.992,"d":"99.20%"},5,4,1,{"v":0.0841859,"d":"0.084"},{"v":0.0154081,"d":"0.0154"},"gi|302143191|emb|CBI20486.3|","unnamed protein product [Vitis vinifera]","gi|359493938|ref|XM_002282853.2|","PREDICTED: Vitis vinifera 50S ribosomal protein L24, chloroplastic-like, transcript variant 1 (LOC100250357), mRNA","sp|Q02764|RK24_TOBAC","50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum GN=RPL24 PE=1 SV=1","COG0198","Ribosomal protein L24","K02895","vvi:100250357","large subunit ribosomal protein L24","GO:0032544//plastid translation;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0003723//RNA binding;GO:0003735//structural constituent of ribosome","GO:0009941//chloroplast envelope;GO:0015934//large ribosomal subunit;GO:0009570//chloroplast stroma"]
[152,"CSE_CL2766_Contig2","SW_CL1205_Contig8","+","-","+(Mostly)",627,{"v":0.987,"d":"98.70%"},8,2,6,{"v":0.687556,"d":"0.688"},{"v":0.459419,"d":"0.4594"},"gi|296089975|emb|CBI39794.3|","unnamed protein product [Vitis vinifera]","gi|225462014|ref|XM_002267790.1|","PREDICTED: Vitis vinifera probable peptidyl-prolyl cis-trans isomerase C27F1.06c-like (LOC100261657), mRNA","sp|Q944B0|FK161_ARATH","Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1","COG0545","FKBP-type peptidyl-prolyl cis-trans isomerases 1","K14826","osa:4335968","FK506-binding nuclear protein [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000412//histone peptidyl-prolyl isomerization","GO:0005528//FK506 binding;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0005730//nucleolus;GO:0009507//chloroplast;GO:0016020//membrane"]
[153,"CSE_Unigene5309","SW_Unigene24457","+","-","+(Strictly)",729,{"v":0.993,"d":"99.30%"},5,3,2,{"v":0.21702,"d":"0.217"},{"v":0.0989727,"d":"0.0990"},"gi|225428570|ref|XP_002281086.1|","PREDICTED: endothelin-converting enzyme 2 [Vitis vinifera] >gi|297741411|emb|CBI32542.3| unnamed protein product [Vitis vinifera]","gi|359475258|ref|XM_002281050.2|","PREDICTED: Vitis vinifera endothelin-converting enzyme 2-like (LOC100260707), mRNA","-","-","COG0500","SAM-dependent methyltransferases","-","-","-","GO:0032259//methylation;GO:0006508//proteolysis","GO:0008168//methyltransferase activity;GO:0008233//peptidase activity","GO:0005794//Golgi apparatus"]
[154,"CSE_Unigene11004","SW_CL4611_Contig1","+","-","+(Strictly)",726,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225432226|ref|XP_002270283.1|","PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera] >gi|297736833|emb|CBI26034.3| unnamed protein product [Vitis vinifera]","gi|225432225|ref|XM_002270247.1|","PREDICTED: Vitis vinifera chromatin structure-remodeling complex protein BSH-like (LOC100249448), mRNA","sp|P93045|BSH_ARATH","Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BSH PE=1 SV=2","-","-","K11648","vvi:100249448","SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1","GO:0040029//regulation of gene expression, epigenetic;GO:0006338//chromatin remodeling","GO:0003682//chromatin binding;GO:0005515//protein binding","GO:0000228//nuclear chromosome"]
[155,"CSE_CL1564_Contig9","SW_CL2446_Contig2","+","-","+(Strictly)",624,{"v":0.997,"d":"99.70%"},2,"NA",2,"NA","NA","gi|225435072|ref|XP_002284406.1|","PREDICTED: 3-hydroxyacyl-CoA dehydratase 2 [Vitis vinifera] >gi|297746135|emb|CBI16191.3| unnamed protein product [Vitis vinifera]","gi|359479001|ref|XM_002284370.2|","PREDICTED: Vitis vinifera 3-hydroxyacyl-CoA dehydratase 2-like (LOC100255240), mRNA","sp|Q8VZB2|PAS2_ARATH","Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2 PE=1 SV=1","COG5198","Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg)","K10703","sbi:SORBI_09g022630","3-hydroxy acyl-CoA dehydratase [EC:4.2.1.-]","-","-","-"]
[156,"CSE_CL3642_Contig3","SW_CL1107_Contig3","+","-","+(Strictly)",693,{"v":0.991,"d":"99.10%"},6,4,2,{"v":0.15631,"d":"0.156"},{"v":0.0323656,"d":"0.0324"},"gi|225435864|ref|XP_002265488.1|","PREDICTED: methyltransferase-like protein 22-like [Vitis vinifera]","gi|359479281|ref|XM_002265452.2|","PREDICTED: Vitis vinifera methyltransferase-like protein 22-like (LOC100251275), mRNA","-","-","COG3897","Predicted methyltransferase","-","-","-","GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0005737//cytoplasm"]
[157,"CSE_Unigene10468","SW_Unigene12688","+","-","+(Strictly)",678,{"v":0.994,"d":"99.40%"},4,"NA",4,"NA","NA","gi|225440598|ref|XP_002277660.1|","PREDICTED: uncharacterized protein LOC100244154 isoform 1 [Vitis vinifera] >gi|297740254|emb|CBI30436.3| unnamed protein product [Vitis vinifera]","gi|359481690|ref|XM_002277624.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244154, transcript variant 1 (LOC100244154), mRNA","sp|Q8LBZ4|OTU_ARATH","OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana GN=At3g57810 PE=2 SV=1","-","-","-","-","-","GO:0006508//proteolysis","GO:0008233//peptidase activity","GO:0005737//cytoplasm"]
[158,"CSE_CL3505_Contig4","SW_Unigene7567","+","-","+(Strictly)",882,{"v":0.992,"d":"99.20%"},7,3,4,{"v":0.441551,"d":"0.442"},{"v":0.242368,"d":"0.2424"},"gi|225444205|ref|XP_002270834.1|","PREDICTED: ribose-5-phosphate isomerase A [Vitis vinifera] >gi|296089229|emb|CBI39001.3| unnamed protein product [Vitis vinifera]","gi|359483979|ref|XM_002270798.2|","PREDICTED: Vitis vinifera ribose-5-phosphate isomerase A-like (LOC100240835), mRNA","sp|Q9ZU38|RPIA_ARATH","Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1","COG0120","Ribose 5-phosphate isomerase","K01807","vvi:100240835","ribose 5-phosphate isomerase A [EC:5.3.1.6]","GO:0016556//mRNA modification;GO:0009052//pentose-phosphate shunt, non-oxidative branch","GO:0004751//ribose-5-phosphate isomerase activity","GO:0009507//chloroplast"]
[159,"CSE_Unigene13239","SW_Unigene13675","+","-","+(Strictly)",585,{"v":0.993,"d":"99.30%"},4,1,3,{"v":0.958056,"d":"0.958"},{"v":0.667774,"d":"0.6678"},"gi|225447610|ref|XP_002273149.1|","PREDICTED: N-acetyltransferase 9-like protein [Vitis vinifera] >gi|296084990|emb|CBI28405.3| unnamed protein product [Vitis vinifera]","gi|359485875|ref|XM_002273113.2|","PREDICTED: Vitis vinifera N-acetyltransferase 9-like protein (LOC100240921), mRNA","-","-","COG1670","Acetyltransferases, including N-acetylases of ribosomal proteins","-","-","-","GO:0008152//metabolic process","GO:0008080//N-acetyltransferase activity","-"]
[160,"CSE_Unigene14835","SW_Unigene22968","+","-","+(Strictly)",2691,{"v":0.996,"d":"99.60%"},10,7,3,{"v":0.146509,"d":"0.147"},{"v":0.00399737,"d":"0.0040"},"gi|225449044|ref|XP_002274159.1|","PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera] >gi|296086015|emb|CBI31456.3| unnamed protein product [Vitis vinifera]","gi|225449043|ref|XM_002274123.1|","PREDICTED: Vitis vinifera endoplasmic reticulum metallopeptidase 1-like (LOC100266752), mRNA","-","-","COG2234","Predicted aminopeptidases","-","-","-","GO:0006508//proteolysis","GO:0008233//peptidase activity","GO:0016020//membrane;GO:0005783//endoplasmic reticulum"]
[161,"CSE_Unigene16250","SW_Unigene6646","+","-","+(Strictly)",1320,{"v":0.986,"d":"98.60%"},15,7,8,{"v":0.374514,"d":"0.375"},{"v":0.0537813,"d":"0.0538"},"gi|225449224|ref|XP_002276243.1|","PREDICTED: uncharacterized protein At2g39910 [Vitis vinifera] >gi|296086104|emb|CBI31545.3| unnamed protein product [Vitis vinifera]","gi|225449223|ref|XM_002276207.1|","PREDICTED: Vitis vinifera uncharacterized LOC100261631 (LOC100261631), mRNA","sp|Q8GXP4|Y2991_ARATH","Uncharacterized protein At2g39910 OS=Arabidopsis thaliana GN=At2g39910 PE=2 SV=2","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[162,"CSE_Unigene12912","SW_CL2846_Contig1","+","-","+(Strictly)",876,{"v":0.997,"d":"99.70%"},3,1,2,{"v":0.715696,"d":"0.716"},{"v":0.583134,"d":"0.5831"},"gi|297741104|emb|CBI31835.3|","unnamed protein product [Vitis vinifera]","gi|359490402|ref|XM_002274611.2|","PREDICTED: Vitis vinifera uncharacterized LOC100252183 (LOC100252183), mRNA","-","-","-","-","-","-","-","GO:0010190//cytochrome b6f complex assembly;GO:0010207//photosystem II assembly","-","GO:0009507//chloroplast"]
[163,"CSE_CL7223_Contig1","SW_Unigene22890","+","-","+(Strictly)",1149,{"v":0.978,"d":"97.80%"},13,6,7,{"v":0.404093,"d":"0.404"},{"v":0.0925247,"d":"0.0925"},"gi|225459882|ref|XP_002262834.1|","PREDICTED: uncharacterized protein LOC100244872 isoform 1 [Vitis vinifera] >gi|297734717|emb|CBI16951.3| unnamed protein product [Vitis vinifera]","gi|225459881|ref|XM_002262798.1|","PREDICTED: Vitis vinifera 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase-like, transcript variant 1 (LOC100244872), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","K14759","bdi:100843372","isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113]","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0006364//rRNA processing;GO:0009657//plastid organization;GO:0010207//photosystem II assembly;GO:0019761//glucosinolate biosynthetic process;GO:0043085//positive regulation of catalytic activity","GO:0016787//hydrolase activity","GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid"]
[164,"CSE_Unigene15711","SW_CL8050_Contig1","-","+","+(Mostly)",984,{"v":0.994,"d":"99.40%"},6,5,1,{"v":0.0792969,"d":"0.079"},{"v":0.0081319,"d":"0.0081"},"gi|359497266|ref|XP_002268717.2|","PREDICTED: UDP-N-acetylglucosamine transporter-like [Vitis vinifera] >gi|296084745|emb|CBI25889.3| unnamed protein product [Vitis vinifera]","gi|359497265|ref|XM_002268681.2|","PREDICTED: Vitis vinifera UDP-N-acetylglucosamine transporter-like (LOC100264881), mRNA","sp|Q8LES0|CSTR5_ARATH","CMP-sialic acid transporter 5 OS=Arabidopsis thaliana GN=At5g65000 PE=2 SV=1","COG0697","Permeases of the drug/metabolite transporter (DMT) superfamily","K15272","vvi:100264881","solute carrier family 35 (UDP-sugar transporter), member A1/2/3","GO:0055085//transmembrane transport;GO:0010584//pollen exine formation;GO:0008643//carbohydrate transport;GO:0015780//nucleotide-sugar transport","GO:0005351//sugar:hydrogen symporter activity;GO:0005338//nucleotide-sugar transmembrane transporter activity","GO:0016021//integral to membrane;GO:0000139//Golgi membrane;GO:0009507//chloroplast"]
[165,"CSE_Unigene20951","SW_Unigene20936","-","+","+(Mostly)",975,{"v":0.993,"d":"99.30%"},7,4,3,{"v":0.281327,"d":"0.281"},{"v":0.094569,"d":"0.0946"},"gi|147777809|emb|CAN64607.1|","hypothetical protein VITISV_030583 [Vitis vinifera]","gi|359496913|ref|XM_002265151.2|","PREDICTED: Vitis vinifera protein SGT1 homolog At5g65490-like (LOC100242690), mRNA","sp|Q9LSM5|SGT1_ARATH","Protein SGT1 homolog At5g65490 OS=Arabidopsis thaliana GN=At5g65490 PE=2 SV=1","-","-","-","-","-","-","-","GO:0009507//chloroplast"]
[166,"CSE_Unigene11338","SW_Unigene7652","-","+","+(Mostly)",1455,{"v":0.993,"d":"99.30%"},4,2,2,{"v":0.371942,"d":"0.372"},{"v":0.293063,"d":"0.2931"},"gi|225424368|ref|XP_002281246.1|","PREDICTED: histone-lysine N-methyltransferase setd3 [Vitis vinifera] >gi|297737636|emb|CBI26837.3| unnamed protein product [Vitis vinifera]","gi|349725821|emb|FQ393773.1|","Vitis vinifera clone SS0AFA24YF01","sp|Q9XI84|RBCMT_ARATH","[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1","-","-","K00592","aly:ARALYDRAFT_471564","[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]","-","-","GO:0009507//chloroplast"]
[167,"CSE_Unigene11353","SW_Unigene22015","-","+","+(Mostly)",534,{"v":0.993,"d":"99.30%"},4,2,2,{"v":0.363514,"d":"0.364"},{"v":0.286837,"d":"0.2868"},"gi|225424772|ref|XP_002269008.1|","PREDICTED: uncharacterized protein LOC100267269 [Vitis vinifera]","gi|225424771|ref|XM_002268972.1|","PREDICTED: Vitis vinifera uncharacterized LOC100267269 (LOC100267269), mRNA","-","-","-","-","-","-","-","-","-","-"]
[168,"CSE_Unigene15975","SW_Unigene18368","-","+","+(Mostly)",2319,{"v":0.995,"d":"99.50%"},11,10,1,{"v":0.0256129,"d":"0.026"},{"v":1.13331e-06,"d":"0.0000"},"gi|359473966|ref|XP_002272937.2|","PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Vitis vinifera]","gi|359473965|ref|XM_002272901.2|","PREDICTED: Vitis vinifera N6-adenosine-methyltransferase MT-A70-like (LOC100256414), mRNA","sp|O82486|MTA70_ARATH","N6-adenosine-methyltransferase MT-A70-like OS=Arabidopsis thaliana GN=EMB1706 PE=1 SV=2","COG4725","Transcriptional activator, adenine-specific DNA methyltransferase","K05925","osa:4330284","mRNA (2'-O-methyladenosine-N6-)-methyltransferase [EC:2.1.1.62]","GO:0080009//mRNA methylation;GO:0009793//embryo development ending in seed dormancy","GO:0016422//mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity;GO:0005515//protein binding","GO:0016607//nuclear speck;GO:0009507//chloroplast"]
[169,"CSE_Unigene17419","SW_CL7935_Contig1","-","+","+(Mostly)",945,{"v":0.993,"d":"99.30%"},7,3,4,{"v":0.278802,"d":"0.279"},{"v":0.105883,"d":"0.1059"},"gi|225428055|ref|XP_002279493.1|","PREDICTED: pre-mRNA-splicing factor syf2 isoform 1 [Vitis vinifera] >gi|297744598|emb|CBI37860.3| unnamed protein product [Vitis vinifera]","gi|225428054|ref|XM_002279457.1|","PREDICTED: Vitis vinifera pre-mRNA-splicing factor syf2-like, transcript variant 1 (LOC100252114), mRNA","-","-","-","-","K12868","vvi:100252114","pre-mRNA-splicing factor SYF2","-","-","GO:0009536//plastid"]
[170,"CSE_Unigene15967","SW_Unigene15969","-","+","+(Mostly)",1131,{"v":0.991,"d":"99.10%"},10,8,2,{"v":0.0853341,"d":"0.085"},{"v":0.000499638,"d":"0.0005"},"gi|359475308|ref|XP_003631647.1|","PREDICTED: guanine nucleotide-binding protein subunit beta-2-like [Vitis vinifera] >gi|297741450|emb|CBI32581.3| unnamed protein product [Vitis vinifera]","gi|349705910|emb|FQ384449.1|","Vitis vinifera clone SS0AAG1YH18","sp|P93563|GBB_SOLTU","Guanine nucleotide-binding protein subunit beta OS=Solanum tuberosum GN=GB1 PE=2 SV=1","COG2319","FOG: WD40 repeat","K04536","vvi:100853292","guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1","GO:0009845//seed germination;GO:0009867//jasmonic acid mediated signaling pathway;GO:0010154//fruit development;GO:0009887//organ morphogenesis;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009817//defense response to fungus, incompatible interaction;GO:0048527//lateral root development;GO:0016573//histone acetylation;GO:0009723//response to ethylene stimulus;GO:0007186//G-protein coupled receptor signaling pathway","GO:0004402//histone acetyltransferase activity","GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[171,"CSE_Unigene20150","SW_Unigene20418","-","+","+(Mostly)",873,{"v":0.993,"d":"99.30%"},6,3,3,{"v":0.251807,"d":"0.252"},{"v":0.101238,"d":"0.1012"},"gi|359475871|ref|XP_002285449.2|","PREDICTED: protein MEMO1-like [Vitis vinifera] >gi|296082111|emb|CBI21116.3| unnamed protein product [Vitis vinifera]","gi|359475870|ref|XM_002285413.2|","PREDICTED: Vitis vinifera protein MEMO1-like (LOC100256144), mRNA","-","-","COG1355","Predicted dioxygenase","K06990","vvi:100256144",null,"-","-","GO:0005634//nucleus"]
[172,"CSE_Unigene1448","SW_CL8476_Contig1","-","+","+(Mostly)",810,{"v":0.996,"d":"99.60%"},3,1,2,{"v":0.653315,"d":"0.653"},{"v":0.557813,"d":"0.5578"},"gi|147790065|emb|CAN75987.1|","hypothetical protein VITISV_012192 [Vitis vinifera]","gi|359477499|ref|XM_002277809.2|","PREDICTED: Vitis vinifera uncharacterized LOC100242495, transcript variant 1 (LOC100242495), mRNA","-","-","COG2106","Uncharacterized conserved protein","K09142","vvi:100242495","hypothetical protein","GO:0006626//protein targeting to mitochondrion;GO:0009560//embryo sac egg cell differentiation;GO:0000741//karyogamy","-","GO:0005634//nucleus"]
[173,"CSE_Unigene14967","SW_CL1646_Contig1","-","+","+(Mostly)",1377,{"v":0.993,"d":"99.30%"},10,8,2,{"v":0.0891649,"d":"0.089"},{"v":0.000623643,"d":"0.0006"},"gi|225434411|ref|XP_002271596.1|","PREDICTED: 28S ribosomal protein S29, mitochondrial [Vitis vinifera] >gi|297745805|emb|CBI15861.3| unnamed protein product [Vitis vinifera]","gi|359478507|ref|XM_002271560.2|","PREDICTED: Vitis vinifera mitochondrial 28S ribosomal protein S29-like (LOC100262146), mRNA","sp|Q9LK03|PERK2_ARATH","Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3","-","-","-","-","-","GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0006164//purine nucleotide biosynthetic process","-","GO:0005739//mitochondrion"]
[174,"CSE_Unigene15421","SW_Unigene13418","-","+","+(Mostly)",1842,{"v":0.995,"d":"99.50%"},9,4,5,{"v":0.365266,"d":"0.365"},{"v":0.0327234,"d":"0.0327"},"gi|225435323|ref|XP_002285170.1|","PREDICTED: vacuolar fusion protein MON1 homolog A [Vitis vinifera] >gi|297746260|emb|CBI16316.3| unnamed protein product [Vitis vinifera]","gi|225435322|ref|XM_002285134.1|","PREDICTED: Vitis vinifera SAND family (SAND), mRNA","-","-","-","-","-","-","-","GO:0006882//cellular zinc ion homeostasis;GO:0009624//response to nematode;GO:0006816//calcium ion transport","-","GO:0005634//nucleus"]
[175,"CSE_Unigene15566","SW_Unigene12430","-","+","+(Mostly)",663,{"v":0.994,"d":"99.40%"},4,2,2,{"v":0.340721,"d":"0.341"},{"v":0.26594,"d":"0.2659"},"gi|225435454|ref|XP_002285453.1|","PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase isoform 2 [Vitis vinifera] >gi|225435456|ref|XP_002285450.1| PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase isoform 1 [Vitis vinifera] >gi|297746323|emb|CBI16379.3| unnamed protein product [Vitis vinifera]","gi|359478384|ref|XM_002285417.2|","PREDICTED: Vitis vinifera probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase-like, transcript variant 2 (LOC100263963), mRNA","sp|O48962|EBP_ARATH","Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1","-","-","K01824","vvi:100263963","cholestenol delta-isomerase [EC:5.3.3.5]","GO:0016132//brassinosteroid biosynthetic process;GO:0019932//second-messenger-mediated signaling;GO:0006084//acetyl-CoA metabolic process;GO:0060964//regulation of gene silencing by miRNA;GO:0016126//sterol biosynthetic process","GO:0047750//cholestenol delta-isomerase activity;GO:0000247//C-8 sterol isomerase activity","GO:0016021//integral to membrane;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[176,"CSE_Unigene19808","SW_Unigene6379","-","+","+(Mostly)",2598,{"v":0.995,"d":"99.50%"},12,9,3,{"v":0.11327,"d":"0.113"},{"v":0.000456971,"d":"0.0005"},"gi|359479295|ref|XP_003632252.1|","PREDICTED: nuclear cap-binding protein subunit 1-like isoform 2 [Vitis vinifera] >gi|296083820|emb|CBI24208.3| unnamed protein product [Vitis vinifera]","gi|359479294|ref|XM_003632204.1|","PREDICTED: Vitis vinifera nuclear cap-binding protein subunit 1-like, transcript variant 2 (LOC100265341), mRNA","sp|Q9SIU2|NCBP1_ARATH","Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana GN=ABH1 PE=1 SV=2","-","-","K12882","vvi:100265341","nuclear cap-binding protein subunit 1","GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0000226//microtubule cytoskeleton organization;GO:0051028//mRNA transport;GO:0050826//response to freezing;GO:0006366//transcription from RNA polymerase II promoter;GO:0009793//embryo development ending in seed dormancy;GO:0000911//cytokinesis by cell plate formation;GO:0051567//histone H3-K9 methylation;GO:0031053//primary miRNA processing;GO:0006412//translation;GO:0009086//methionine biosynthetic process;GO:0006342//chromatin silencing;GO:0009640//photomorphogenesis;GO:0019915//lipid storage;GO:0010182//sugar mediated signaling pathway;GO:0009933//meristem structural organization;GO:0006306//DNA methylation;GO:0016567//protein ubiquitination;GO:0045292//mRNA cis splicing, via spliceosome;GO:0009845//seed germination;GO:0009887//organ morphogenesis;GO:0009737//response to abscisic acid stimulus;GO:0009909//regulation of flower development;GO:0048574//long-day photoperiodism, flowering;GO:0010162//seed dormancy process","GO:0005515//protein binding;GO:0003677//DNA binding;GO:0000339//RNA cap binding","GO:0005829//cytosol;GO:0005846//nuclear cap binding complex;GO:0005634//nucleus"]
[177,"CSE_Unigene14644","SW_Unigene14551","-","+","+(Mostly)",1614,{"v":0.988,"d":"98.80%"},19,10,9,{"v":0.38259,"d":"0.383"},{"v":0.0410722,"d":"0.0411"},"gi|147799196|emb|CAN65774.1|","hypothetical protein VITISV_030411 [Vitis vinifera]","gi|225441111|ref|XM_002264904.1|","PREDICTED: Vitis vinifera probable allantoin permease-like (LOC100253862), mRNA","-","-","COG1953","Cytosine/uracil/thiamine/allantoin permeases","K03457","ath:AT5G03555","nucleobase:cation symporter-1, NCS1 family","GO:0009411//response to UV;GO:0015851//nucleobase transport;GO:0009813//flavonoid biosynthetic process;GO:0015931//nucleobase-containing compound transport;GO:0043100//pyrimidine nucleobase salvage","GO:0015205//nucleobase transmembrane transporter activity","GO:0009526//plastid envelope;GO:0009507//chloroplast;GO:0016020//membrane"]
[178,"CSE_Unigene12024","SW_CL1508_Contig2","-","+","+(Mostly)",600,{"v":0.985,"d":"98.50%"},6,3,3,{"v":0.333471,"d":"0.333"},{"v":0.171336,"d":"0.1713"},"gi|225441096|ref|XP_002263825.1|","PREDICTED: dnaJ homolog subfamily C member 28 [Vitis vinifera]","gi|225441095|ref|XM_002263789.1|","PREDICTED: Vitis vinifera dnaJ homolog subfamily C member 28-like (LOC100241894), mRNA","-","-","-","-","K03457","osa:4346324","nucleobase:cation symporter-1, NCS1 family","GO:0015931//nucleobase-containing compound transport","GO:0015391//nucleobase:cation symporter activity","GO:0009507//chloroplast"]
[179,"CSE_CL3116_Contig1","SW_Unigene18163","-","+","+(Mostly)",3807,{"v":0.992,"d":"99.20%"},30,25,5,{"v":0.0592006,"d":"0.059"},{"v":4.64217e-12,"d":"0.0000"},"gi|225440310|ref|XP_002262987.1|","PREDICTED: 5-oxoprolinase-like [Vitis vinifera]","gi|123656047|emb|AM433445.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X008328.5, clone ENTAV 115","sp|Q9FIZ7|OPLA_ARATH","5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1","COG0145","N-methylhydantoinase A/acetone carboxylase, beta subunit","K01469","vvi:100252923","5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]","GO:0006751//glutathione catabolic process","GO:0017168//5-oxoprolinase (ATP-hydrolyzing) activity","GO:0009506//plasmodesma;GO:0005829//cytosol"]
[180,"CSE_Unigene18065","SW_Unigene6792","-","+","+(Mostly)",4626,{"v":0.997,"d":"99.70%"},12,9,3,{"v":0.129339,"d":"0.129"},{"v":0.000978452,"d":"0.0010"},"gi|359484532|ref|XP_002280317.2|","PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Vitis vinifera]","gi|123664181|emb|AM469857.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X244903.14, clone ENTAV 115","sp|P0C8M8|CCR1_MAIZE","Probable serine/threonine-protein kinase CCRP1 OS=Zea mays GN=CCRP1 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K08333","vvi:100256057","phosphoinositide-3-kinase, regulatory subunit 4, p150 [EC:2.7.11.1]","GO:0009630//gravitropism;GO:0006635//fatty acid beta-oxidation;GO:0006891//intra-Golgi vesicle-mediated transport;GO:0006869//lipid transport;GO:0010351//lithium ion transport;GO:0009873//ethylene mediated signaling pathway;GO:0016558//protein import into peroxisome matrix;GO:0048573//photoperiodism, flowering;GO:0009846//pollen germination;GO:0006468//protein phosphorylation;GO:0000303//response to superoxide;GO:0009555//pollen development;GO:0044265//cellular macromolecule catabolic process;GO:0008219//cell death;GO:0009863//salicylic acid mediated signaling pathway","GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding","GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005794//Golgi apparatus"]
[181,"CSE_Unigene255","SW_Unigene22860","-","+","+(Mostly)",3147,{"v":0.996,"d":"99.60%"},14,9,5,{"v":0.199246,"d":"0.199"},{"v":0.00331004,"d":"0.0033"},"gi|225445228|ref|XP_002280942.1|","PREDICTED: membrane-bound transcription factor site-1 protease [Vitis vinifera]","gi|225445227|ref|XM_002280906.1|","PREDICTED: Vitis vinifera membrane-bound transcription factor peptidase, site 1 (MBTPS1), mRNA","-","-","COG1404","Subtilisin-like serine proteases","K08653","vvi:100264570","membrane-bound transcription factor site-1 protease [EC:3.4.21.112]","GO:0006629//lipid metabolic process;GO:0042538//hyperosmotic salinity response;GO:0006508//proteolysis;GO:0006486//protein glycosylation;GO:0006888//ER to Golgi vesicle-mediated transport","GO:0004252//serine-type endopeptidase activity","GO:0005576//extracellular region;GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus"]
[182,"CSE_Unigene13909","SW_Unigene15920","-","+","+(Mostly)",558,{"v":0.993,"d":"99.30%"},4,2,2,{"v":0.307272,"d":"0.307"},{"v":0.235383,"d":"0.2354"},"gi|225445569|ref|XP_002282316.1|","PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera] >gi|297738982|emb|CBI28227.3| unnamed protein product [Vitis vinifera]","gi|225445568|ref|XM_002282280.1|","PREDICTED: Vitis vinifera elongation factor Ts, mitochondrial-like (LOC100259510), mRNA","sp|B9SEZ6|EFTS_RICCO","Elongation factor Ts, mitochondrial OS=Ricinus communis GN=EFTS PE=3 SV=1","COG0264","Translation elongation factor Ts","K02357","smo:SELMODRAFT_60716","elongation factor Ts","GO:0006414//translational elongation","GO:0003746//translation elongation factor activity","GO:0005739//mitochondrion"]
[183,"CSE_Unigene17184","SW_Unigene13904","-","+","+(Mostly)",969,{"v":0.998,"d":"99.80%"},2,1,1,{"v":0.306988,"d":"0.307"},{"v":0.360159,"d":"0.3602"},"gi|225445652|ref|XP_002265472.1|","PREDICTED: proteasomal ubiquitin receptor ADRM1 [Vitis vinifera] >gi|297736028|emb|CBI24066.3| unnamed protein product [Vitis vinifera]","gi|359484920|ref|XM_002265436.2|","PREDICTED: Vitis vinifera proteasomal ubiquitin receptor ADRM1-like (LOC100250036), mRNA","-","-","-","-","-","-","-","GO:0006499//N-terminal protein myristoylation;GO:0007155//cell adhesion;GO:0051604//protein maturation;GO:0009640//photomorphogenesis;GO:0010388//cullin deneddylation","GO:0000166//nucleotide binding","GO:0005737//cytoplasm;GO:0016021//integral to membrane;GO:0005634//nucleus"]
[184,"CSE_Unigene15386","SW_Unigene22243","-","+","+(Mostly)",927,{"v":0.985,"d":"98.50%"},14,7,7,{"v":0.426513,"d":"0.427"},{"v":0.132361,"d":"0.1324"},"gi|225465835|ref|XP_002264402.1|","PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]","gi|359487144|ref|XM_002264366.2|","PREDICTED: Vitis vinifera U-box domain-containing protein 4-like (LOC100249738), mRNA","sp|O22193|PUB4_ARATH","U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3","-","-","K14431","aly:ARALYDRAFT_311885","transcription factor TGA","-","GO:0016874//ligase activity","GO:0005739//mitochondrion"]
[185,"CSE_Unigene19309","SW_Unigene16735","-","+","+(Mostly)",1281,{"v":0.991,"d":"99.10%"},9,4,5,{"v":0.453534,"d":"0.454"},{"v":0.198925,"d":"0.1989"},"gi|225454194|ref|XP_002273844.1|","PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis vinifera]","gi|359489594|ref|XM_002273808.2|","PREDICTED: Vitis vinifera uncharacterized LOC100251611 (LOC100251611), mRNA","sp|Q9M2D2|YU88_ARATH","UPF0187 protein At3g61320, chloroplastic OS=Arabidopsis thaliana GN=At3g61320 PE=2 SV=2","COG3781","Predicted membrane protein","K08994","ota:Ot16g02730","putative membrane protein","GO:0048449//floral organ formation;GO:0016570//histone modification;GO:0009909//regulation of flower development","-","GO:0009507//chloroplast"]
[186,"CSE_Unigene12658","SW_Unigene5359","-","+","+(Mostly)",1542,{"v":0.993,"d":"99.30%"},11,9,2,{"v":0.061063,"d":"0.061"},{"v":3.79395e-05,"d":"0.0000"},"gi|225456944|ref|XP_002281533.1|","PREDICTED: WD40 repeat-containing protein SMU1 [Vitis vinifera] >gi|297733734|emb|CBI14981.3| unnamed protein product [Vitis vinifera]","gi|225456943|ref|XM_002281497.1|","PREDICTED: Vitis vinifera WD40 repeat-containing protein SMU1-like (LOC100241550), mRNA","sp|Q3Y8L7|WDR69_CHLRE","Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii GN=ODA16 PE=1 SV=1","COG2319","FOG: WD40 repeat","K13111","vvi:100241550","WD40 repeat-containing protein SMU1","GO:0008380//RNA splicing","GO:0016905//myosin heavy chain kinase activity;GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[187,"CSE_Unigene17385","SW_Unigene16042","-","+","+(Mostly)",1263,{"v":0.991,"d":"99.10%"},11,4,7,{"v":0.572665,"d":"0.573"},{"v":0.267559,"d":"0.2676"},"gi|225456230|ref|XP_002283095.1|","PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [Vitis vinifera]","gi|225456229|ref|XM_002283059.1|","PREDICTED: Vitis vinifera NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like (LOC100249021), mRNA","-","-","COG0167","Dihydroorotate dehydrogenase","K00207","vvi:100249021","dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]","GO:0055114//oxidation-reduction process;GO:0006212//uracil catabolic process;GO:0006222//UMP biosynthetic process;GO:0006207//'de novo' pyrimidine nucleobase biosynthetic process;GO:0043562//cellular response to nitrogen levels","GO:0004158//dihydroorotate oxidase activity;GO:0017113//dihydropyrimidine dehydrogenase (NADP+) activity","GO:0009570//chloroplast stroma;GO:0005886//plasma membrane"]
[188,"CSE_Unigene18869","SW_Unigene12159","-","+","+(Mostly)",696,{"v":0.996,"d":"99.60%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225456297|ref|XP_002283689.1|","PREDICTED: uncharacterized protein LOC100247416 [Vitis vinifera] >gi|147823132|emb|CAN75279.1| hypothetical protein VITISV_030868 [Vitis vinifera] >gi|297734405|emb|CBI15652.3| unnamed protein product [Vitis vinifera]","gi|359491071|ref|XM_002283653.2|","PREDICTED: Vitis vinifera uncharacterized LOC100247416 (LOC100247416), mRNA","-","-","COG1872","Uncharacterized conserved protein","K09131","vvi:100247416","hypothetical protein","-","-","GO:0005634//nucleus;GO:0009507//chloroplast"]
[189,"CSE_CL6566_Contig1","SW_CL127_Contig1","-","+","+(Mostly)",669,{"v":0.988,"d":"98.80%"},8,4,4,{"v":0.33296,"d":"0.333"},{"v":0.115226,"d":"0.1152"},"gi|225456361|ref|XP_002280221.1|","PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis vinifera] >gi|297734440|emb|CBI15687.3| unnamed protein product [Vitis vinifera]","gi|359491098|ref|XM_002280185.2|","PREDICTED: Vitis vinifera thylakoid lumenal 17.9 kDa protein, chloroplastic-like (LOC100262841), mRNA","sp|Q9SW33|TL1Y_ARATH","Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g24930 PE=1 SV=1","-","-","-","-","-","GO:0019761//glucosinolate biosynthetic process;GO:0010103//stomatal complex morphogenesis","-","GO:0009543//chloroplast thylakoid lumen"]
[190,"CSE_Unigene20911","SW_Unigene11563","-","+","+(Mostly)",1911,{"v":0.995,"d":"99.50%"},10,4,6,{"v":0.581563,"d":"0.582"},{"v":0.442746,"d":"0.4427"},"gi|359492366|ref|XP_002284607.2|","PREDICTED: NAD kinase 2, chloroplastic-like [Vitis vinifera]","gi|359492365|ref|XM_002284571.2|","PREDICTED: Vitis vinifera NAD kinase 2, chloroplastic-like (LOC100266161), mRNA","sp|Q9C5W3|NADK2_ARATH","NAD kinase 2, chloroplastic OS=Arabidopsis thaliana GN=NADK2 PE=1 SV=1","COG0061","Predicted sugar kinase","K00858","cre:CHLREDRAFT_196779","NAD+ kinase [EC:2.7.1.23]","GO:0006741//NADP biosynthetic process;GO:0019674//NAD metabolic process;GO:0016310//phosphorylation","GO:0005516//calmodulin binding;GO:0003951//NAD+ kinase activity;GO:0000166//nucleotide binding","GO:0009507//chloroplast"]
[191,"CSE_Unigene1845","SW_Unigene17598","-","+","+(Mostly)",1599,{"v":0.994,"d":"99.40%"},9,4,5,{"v":0.467113,"d":"0.467"},{"v":0.209928,"d":"0.2099"},"gi|359492914|ref|XP_002283933.2|","PREDICTED: uncharacterized protein LOC100267813 [Vitis vinifera]","gi|359492913|ref|XM_002283897.2|","PREDICTED: Vitis vinifera uncharacterized LOC100267813 (LOC100267813), mRNA","sp|Q9LTX3|PPOX1_ARATH","Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic OS=Arabidopsis thaliana GN=PPOX1 PE=1 SV=1","COG0259","Pyridoxamine-phosphate oxidase","-","-","-","GO:0055114//oxidation-reduction process;GO:0042823//pyridoxal phosphate biosynthetic process;GO:0006779//porphyrin-containing compound biosynthetic process;GO:0008615//pyridoxine biosynthetic process;GO:0019761//glucosinolate biosynthetic process;GO:0042817//pyridoxal metabolic process","GO:0004729//oxygen-dependent protoporphyrinogen oxidase activity;GO:0004733//pyridoxamine-phosphate oxidase activity;GO:0010181//FMN binding","GO:0005829//cytosol;GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid;GO:0005576//extracellular region"]
[192,"CSE_CL2589_Contig1","SW_Unigene11871","-","+","+(Mostly)",1128,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.301949,"d":"0.302"},{"v":0.229556,"d":"0.2296"},"gi|225457961|ref|XP_002275256.1|","PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera] >gi|302142670|emb|CBI19873.3| unnamed protein product [Vitis vinifera]","gi|225457960|ref|XM_002275220.1|","PREDICTED: Vitis vinifera BRCA1-A complex subunit BRE-like (LOC100264259), mRNA","-","-","-","-","K12173","vvi:100264259","BRCA1-A complex subunit BRE","-","-","-"]
[193,"CSE_Unigene16849","SW_Unigene13313","-","+","+(Mostly)",678,{"v":0.979,"d":"97.90%"},14,12,2,{"v":0.0613794,"d":"0.061"},{"v":4.75738e-07,"d":"0.0000"},"gi|225459888|ref|XP_002262923.1|","PREDICTED: uncharacterized protein LOC100267182 [Vitis vinifera]","gi|225459887|ref|XM_002262887.1|","PREDICTED: Vitis vinifera uncharacterized LOC100267182 (LOC100267182), mRNA","-","-","-","-","-","-","-","GO:0042538//hyperosmotic salinity response;GO:0009414//response to water deprivation;GO:0048564//photosystem I assembly;GO:0009658//chloroplast organization;GO:0010286//heat acclimation;GO:0080183//response to photooxidative stress","-","GO:0009535//chloroplast thylakoid membrane"]
[194,"CSE_Unigene18415","SW_Unigene13312","-","+","+(Mostly)",1986,{"v":0.996,"d":"99.60%"},8,4,4,{"v":0.279446,"d":"0.279"},{"v":0.0153491,"d":"0.0153"},"gi|302143058|emb|CBI20353.3|","unnamed protein product [Vitis vinifera]","gi|359493684|ref|XM_002284607.2|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic-like (LOC100258986), mRNA","sp|P82869|CYP37_ARATH","Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic OS=Arabidopsis thaliana GN=CYP37 PE=1 SV=3","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","-","-","-","GO:0016556//mRNA modification;GO:0010103//stomatal complex morphogenesis;GO:0000413//protein peptidyl-prolyl isomerization;GO:0006457//protein folding;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0009535//chloroplast thylakoid membrane;GO:0009543//chloroplast thylakoid lumen"]
[195,"CSE_Unigene19700","SW_Unigene16938","-","+","+(Mostly)",1068,{"v":0.993,"d":"99.30%"},7,{"v":3.67379,"d":"4"},{"v":3.32621,"d":"3"},{"v":0.347993,"d":"0.348"},{"v":0.0993086,"d":"0.0993"},"gi|225461322|ref|XP_002284546.1|","PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein 2 [Vitis vinifera] >gi|302143076|emb|CBI20371.3| unnamed protein product [Vitis vinifera]","gi|359493893|ref|XM_002284510.2|","PREDICTED: Vitis vinifera cytochrome c-type biogenesis ccda-like chloroplastic protein 2 (LOC100245228), mRNA","sp|Q2QY07|CCDA2_ORYSJ","Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica GN=CCDA2 PE=2 SV=1","COG0785","Cytochrome c biogenesis protein","K06196","ppp:PHYPADRAFT_146798","cytochrome c-type biogenesis protein","GO:0010190//cytochrome b6f complex assembly;GO:0045454//cell redox homeostasis;GO:0055114//oxidation-reduction process","-","GO:0055035//plastid thylakoid membrane;GO:0005886//plasma membrane;GO:0009534//chloroplast thylakoid"]
[196,"CSE_Unigene17664","SW_Unigene8281","-","+","+(Strictly)",1329,{"v":0.992,"d":"99.20%"},11,7,4,{"v":0.130919,"d":"0.131"},{"v":0.00133249,"d":"0.0013"},"gi|225427364|ref|XP_002282850.1|","PREDICTED: poly(U)-specific endoribonuclease-B [Vitis vinifera] >gi|297742189|emb|CBI33976.3| unnamed protein product [Vitis vinifera]","gi|225427363|ref|XM_002282814.1|","PREDICTED: Vitis vinifera poly(U)-specific endoribonuclease-B-like (LOC100252369), mRNA","-","-","-","-","K14648","vvi:100252369","poly(U)-specific endoribonuclease [EC:3.1.-.-]","-","GO:0016788//hydrolase activity, acting on ester bonds","GO:0005576//extracellular region;GO:0009536//plastid"]
[197,"CSE_Unigene18350","SW_Unigene13972","-","+","+(Strictly)",1065,{"v":0.983,"d":"98.30%"},18,6,12,{"v":0.847173,"d":"0.847"},{"v":0.794559,"d":"0.7946"},"gi|225429195|ref|XP_002271890.1|","PREDICTED: uncharacterized protein LOC100241185 [Vitis vinifera] >gi|147804805|emb|CAN73523.1| hypothetical protein VITISV_010704 [Vitis vinifera]","gi|225429194|ref|XM_002271854.1|","PREDICTED: Vitis vinifera uncharacterized LOC100241185 (LOC100241185), mRNA","-","-","COG0750","Predicted membrane-associated Zn-dependent proteases 1","-","-","-","GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0042542//response to hydrogen peroxide;GO:0006508//proteolysis;GO:0009408//response to heat","GO:0008233//peptidase activity","GO:0016020//membrane;GO:0009536//plastid;GO:0005739//mitochondrion"]
[198,"CSE_Unigene11291","SW_Unigene16222","-","+","+(Strictly)",1419,{"v":0.994,"d":"99.40%"},8,5,3,{"v":0.128566,"d":"0.129"},{"v":0.0060765,"d":"0.0061"},"gi|225445744|ref|XP_002272482.1|","PREDICTED: 5&apos;-nucleotidase domain-containing protein DDB_G0275467 [Vitis vinifera] >gi|297743716|emb|CBI36599.3| unnamed protein product [Vitis vinifera]","gi|225445743|ref|XM_002272446.1|","PREDICTED: Vitis vinifera 5'-nucleotidase domain-containing protein DDB_G0275467-like (LOC100255302), mRNA","-","-","-","-","-","-","-","GO:0051604//protein maturation","GO:0046872//metal ion binding;GO:0008253//5'-nucleotidase activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[199,"CSE_CL2078_Contig2","SW_Unigene17209","+","+","-",1494,{"v":0.991,"d":"99.10%"},14,7,7,{"v":0.382334,"d":"0.382"},{"v":0.0639767,"d":"0.0640"},"gi|225430539|ref|XP_002285580.1|","PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis vinifera]","gi|359475900|ref|XM_002285544.2|","PREDICTED: Vitis vinifera zinc finger CCCH domain-containing protein 18-like (LOC100254356), mRNA","sp|Q6K687|C3H18_ORYSJ","Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa subsp. japonica GN=Os02g0793000 PE=2 SV=1","-","-","K13103","cre:CHLREDRAFT_108447","tuftelin-interacting protein 11","-","GO:0003676//nucleic acid binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[200,"CSE_Unigene13667","SW_Unigene12483","+","+","-",1770,{"v":0.995,"d":"99.50%"},9,7,2,{"v":0.0796208,"d":"0.080"},{"v":0.000562433,"d":"0.0006"},"gi|225435995|ref|XP_002269919.1|","PREDICTED: F-box/WD-40 repeat-containing protein At5g21040 [Vitis vinifera]","gi|147842283|emb|AM440865.2|","Vitis vinifera contig VV78X217282.6, whole genome shotgun sequence","sp|Q94AD8|FBW3_ARATH","F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana GN=At5g21040 PE=2 SV=1","COG2319","FOG: WD40 repeat","K14963","pop:POPTR_551164","COMPASS component SWD3","GO:0016036//cellular response to phosphate starvation","-","GO:0005737//cytoplasm;GO:0019005//SCF ubiquitin ligase complex"]
[201,"CSE_Unigene14174","SW_Unigene17586","+","+","-",1887,{"v":0.996,"d":"99.60%"},7,4,3,{"v":0.207953,"d":"0.208"},{"v":0.0443548,"d":"0.0444"},"gi|225430918|ref|XP_002270435.1|","PREDICTED: protein KRI1 homolog [Vitis vinifera]","gi|147821483|emb|AM459703.2|","Vitis vinifera contig VV78X126098.4, whole genome shotgun sequence","sp|P13983|EXTN_TOBAC","Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE=2 SV=1","COG5271","AAA ATPase containing von Willebrand factor type A (vWA) domain","K14786","vvi:100240980","protein KRI1","-","-","GO:0005829//cytosol"]
[202,"CSE_Unigene14294","SW_Unigene15792","+","+","-",333,{"v":0.994,"d":"99.40%"},2,1,1,{"v":0.340321,"d":"0.340"},{"v":0.380995,"d":"0.3810"},"gi|225450223|ref|XP_002265835.1|","PREDICTED: thioredoxin-like protein Clot [Vitis vinifera] >gi|297736204|emb|CBI24842.3| unnamed protein product [Vitis vinifera]","gi|225450222|ref|XM_002265799.1|","PREDICTED: Vitis vinifera thioredoxin-like protein Clot (LOC100247612), mRNA","sp|Q9FMN4|TCLOT_ARATH","Thioredoxin-like protein Clot OS=Arabidopsis thaliana GN=At5g42850 PE=2 SV=1","-","-","-","-","-","GO:0045454//cell redox homeostasis","-","GO:0005737//cytoplasm"]
[203,"CSE_Unigene14689","SW_Unigene22644","+","+","-",936,{"v":0.535,"d":"53.50%"},21,7,14,{"v":0.618388,"d":"0.618"},{"v":0.302347,"d":"0.3023"},"gi|359482520|ref|XP_002280228.2|","PREDICTED: beta-galactosidase 17-like [Vitis vinifera] >gi|297743091|emb|CBI35958.3| unnamed protein product [Vitis vinifera]","gi|359482519|ref|XM_002280192.2|","PREDICTED: Vitis vinifera beta-galactosidase 17-like (LOC100251499), mRNA","sp|Q93Z24|BGA17_ARATH","Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1","COG1874","Beta-galactosidase","K12309","vvi:100251499","beta-galactosidase [EC:3.2.1.23]","GO:0010413//glucuronoxylan metabolic process;GO:0016926//protein desumoylation;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0045492//xylan biosynthetic process;GO:0050665//hydrogen peroxide biosynthetic process","GO:0004565//beta-galactosidase activity","GO:0005576//extracellular region"]
[204,"CSE_Unigene15113","SW_Unigene4550","+","+","-",960,{"v":0.99,"d":"99.00%"},10,6,4,{"v":0.209487,"d":"0.209"},{"v":0.0163058,"d":"0.0163"},"gi|359492751|ref|XP_002284446.2|","PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Vitis vinifera] >gi|302141840|emb|CBI19043.3| unnamed protein product [Vitis vinifera]","gi|359492750|ref|XM_002284410.2|","PREDICTED: Vitis vinifera prolyl-tRNA synthetase associated domain-containing protein 1-like (LOC100252259), mRNA","-","-","COG3760","Uncharacterized conserved protein","K10706","smo:SELMODRAFT_444379","senataxin [EC:3.6.4.-]","GO:0006450//regulation of translational fidelity","GO:0002161//aminoacyl-tRNA editing activity","GO:0005829//cytosol"]
[205,"CSE_Unigene15158","SW_Unigene22261","+","+","-",1155,{"v":0.994,"d":"99.40%"},7,4,3,{"v":0.293754,"d":"0.294"},{"v":0.103751,"d":"0.1038"},"gi|147782976|emb|CAN72958.1|","hypothetical protein VITISV_010788 [Vitis vinifera]","gi|349731375|emb|FQ394497.1|","Vitis vinifera clone SS0AFA20YG15","-","-","COG4243","Predicted membrane protein","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0010207//photosystem II assembly;GO:0019761//glucosinolate biosynthetic process","GO:0003955//NAD(P)H dehydrogenase (quinone) activity","GO:0009507//chloroplast;GO:0016020//membrane"]
[206,"CSE_Unigene15497","SW_Unigene17560","+","+","-",480,{"v":0.992,"d":"99.20%"},4,3,1,{"v":0.108829,"d":"0.109"},{"v":0.0459745,"d":"0.0460"},"gi|225445450|ref|XP_002285089.1|","PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera] >gi|147821405|emb|CAN63500.1| hypothetical protein VITISV_011675 [Vitis vinifera] >gi|297738929|emb|CBI28174.3| unnamed protein product [Vitis vinifera]","gi|225445449|ref|XM_002285053.1|","PREDICTED: Vitis vinifera uncharacterized LOC100266409 (LOC100266409), mRNA","sp|F4K460|MED17_ARATH","Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana GN=MED17 PE=1 SV=1","-","-","K15133","vvi:100266409","mediator of RNA polymerase II transcription subunit 17","GO:0006357//regulation of transcription from RNA polymerase II promoter","GO:0001104//RNA polymerase II transcription cofactor activity","GO:0016592//mediator complex"]
[207,"CSE_Unigene15915","SW_Unigene17626","+","+","-",714,{"v":0.96,"d":"96.00%"},17,5,12,{"v":0.895824,"d":"0.896"},{"v":0.783702,"d":"0.7837"},"gi|147818338|emb|CAN75840.1|","hypothetical protein VITISV_031633 [Vitis vinifera]","gi|349719639|emb|FQ381457.1|","Vitis vinifera clone SS0ABP1YJ08","sp|P51204|YCF54_PORPU","Uncharacterized protein ycf54 OS=Porphyra purpurea GN=ycf54 PE=3 SV=1","-","-","-","-","-","-","-","GO:0009579//thylakoid;GO:0009507//chloroplast"]
[208,"CSE_Unigene16245","SW_Unigene21918","+","+","-",1404,{"v":0.997,"d":"99.70%"},4,2,2,{"v":0.290273,"d":"0.290"},{"v":0.218366,"d":"0.2184"},"gi|225440882|ref|XP_002276711.1|","PREDICTED: uncharacterized protein At5g03900, chloroplastic-like [Vitis vinifera]","gi|359482005|ref|XM_002276675.2|","PREDICTED: Vitis vinifera uncharacterized LOC100240863 (LOC100240863), mRNA","sp|Q8GW20|Y5390_ARATH","Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana GN=At5g03900 PE=1 SV=2","-","-","-","-","-","-","-","GO:0009941//chloroplast envelope"]
[209,"CSE_Unigene17393","SW_Unigene11202","+","+","-",2049,{"v":0.996,"d":"99.60%"},9,5,4,{"v":0.203665,"d":"0.204"},{"v":0.0210424,"d":"0.0210"},"gi|225455880|ref|XP_002275327.1|","PREDICTED: protein CASP [Vitis vinifera]","gi|359490941|ref|XM_002275291.2|","PREDICTED: Vitis vinifera protein CASP-like (LOC100259260), mRNA","sp|Q9LS42|CASP_ARATH","Protein CASP OS=Arabidopsis thaliana GN=CASP PE=1 SV=2","COG0419","ATPase involved in DNA repair","K09313","vvi:100259260","homeobox protein cut-like","GO:0006891//intra-Golgi vesicle-mediated transport;GO:0030244//cellulose biosynthetic process","-","GO:0005768//endosome;GO:0030173//integral to Golgi membrane;GO:0005802//trans-Golgi network"]
[210,"CSE_Unigene17851","SW_Unigene15727","+","+","-",1110,{"v":0.993,"d":"99.30%"},8,2,6,{"v":1.08151,"d":"1.082"},{"v":0.915366,"d":"0.9154"},"gi|225426146|ref|XP_002278325.1|","PREDICTED: uncharacterized protein LOC100246733 isoform 1 [Vitis vinifera] >gi|297742242|emb|CBI34391.3| unnamed protein product [Vitis vinifera]","gi|225426145|ref|XM_002278289.1|","PREDICTED: Vitis vinifera uncharacterized LOC100246733, transcript variant 1 (LOC100246733), mRNA","-","-","-","-","K11135","vvi:100246733","Pin2-interacting protein X1","-","GO:0003676//nucleic acid binding","GO:0005622//intracellular"]
[211,"CSE_Unigene18128","SW_CL8715_Contig1","+","+","-",399,{"v":0.949,"d":"94.90%"},12,5,7,{"v":0.514973,"d":"0.515"},{"v":0.30082,"d":"0.3008"},"gi|225427143|ref|XP_002277265.1|","PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera] >gi|297742063|emb|CBI33850.3| unnamed protein product [Vitis vinifera]","gi|225427142|ref|XM_002277229.1|","PREDICTED: Vitis vinifera uncharacterized LOC100266016 (LOC100266016), mRNA","sp|O82290|SKL2_ARATH","Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana GN=SKL2 PE=2 SV=2","-","-","-","-","-","GO:0016310//phosphorylation","GO:0004765//shikimate kinase activity;GO:0005524//ATP binding","GO:0009536//plastid"]
[212,"CSE_Unigene1891","SW_Unigene1599","+","+","-",993,{"v":0.992,"d":"99.20%"},8,6,2,{"v":0.0984551,"d":"0.098"},{"v":0.00261116,"d":"0.0026"},"gi|225453040|ref|XP_002265238.1|","PREDICTED: tyrosyl-tRNA synthetase-like [Vitis vinifera]","gi|359488088|ref|XM_002265202.2|","PREDICTED: Vitis vinifera tyrosyl-tRNA synthetase-like (LOC100246653), mRNA","-","-","COG0162","Tyrosyl-tRNA synthetase","K01866","vvi:100246653","tyrosyl-tRNA synthetase [EC:6.1.1.1]","GO:0006655//phosphatidylglycerol biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0006437//tyrosyl-tRNA aminoacylation;GO:0016226//iron-sulfur cluster assembly;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009658//chloroplast organization;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0003723//RNA binding;GO:0004831//tyrosine-tRNA ligase activity;GO:0005524//ATP binding","GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[213,"CSE_Unigene19359","SW_Unigene17157","+","+","-",1740,{"v":0.994,"d":"99.40%"},11,8,3,{"v":0.11544,"d":"0.115"},{"v":0.000788343,"d":"0.0008"},"gi|359495248|ref|XP_002271456.2|","PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]","gi|359495247|ref|XM_002271420.2|","PREDICTED: Vitis vinifera histidyl-tRNA synthetase-like (LOC100241489), mRNA","sp|P93422|SYH_ORYSJ","Histidine-tRNA ligase OS=Oryza sativa subsp. japonica GN=Os05g0150900 PE=2 SV=2","COG0124","Histidyl-tRNA synthetase","K01892","vvi:100241489","histidyl-tRNA synthetase [EC:6.1.1.21]","GO:0006427//histidyl-tRNA aminoacylation;GO:0048481//ovule development","GO:0005524//ATP binding;GO:0004821//histidine-tRNA ligase activity","GO:0005829//cytosol;GO:0009536//plastid"]
[214,"CSE_Unigene20770","SW_Unigene12940","+","+","-",3120,{"v":0.994,"d":"99.40%"},19,6,13,{"v":0.63461,"d":"0.635"},{"v":0.400049,"d":"0.4000"},"gi|225443088|ref|XP_002271967.1|","PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis vinifera]","gi|225443087|ref|XM_002271931.1|","PREDICTED: Vitis vinifera nuclear pore complex protein Nup98-Nup96-like (LOC100257675), mRNA","-","-","-","-","K14297","ppp:PHYPADRAFT_144605","nuclear pore complex protein Nup98-Nup96","GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0006406//mRNA export from nucleus;GO:0009910//negative regulation of flower development;GO:0009086//methionine biosynthetic process;GO:0009870//defense response signaling pathway, resistance gene-dependent;GO:0010074//maintenance of meristem identity;GO:0006606//protein import into nucleus;GO:0009733//response to auxin stimulus","GO:0005515//protein binding;GO:0015288//porin activity","GO:0031965//nuclear membrane;GO:0005643//nuclear pore"]
[215,"CSE_Unigene294","SW_CL3141_Contig1","+","+","-",1692,{"v":0.989,"d":"98.90%"},15,8,7,{"v":0.277768,"d":"0.278"},{"v":0.0142306,"d":"0.0142"},"gi|225455690|ref|XP_002265587.1|","PREDICTED: mitochondrial intermediate peptidase [Vitis vinifera]","gi|225455689|ref|XM_002265551.1|","PREDICTED: Vitis vinifera mitochondrial intermediate peptidase-like (LOC100262804), mRNA","-","-","COG0339","Zn-dependent oligopeptidases","K01410","vvi:100262804","mitochondrial intermediate peptidase [EC:3.4.24.59]","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0006508//proteolysis","GO:0046872//metal ion binding;GO:0004222//metalloendopeptidase activity","GO:0009535//chloroplast thylakoid membrane;GO:0005739//mitochondrion"]
[216,"CSE_Unigene574","SW_Unigene22759","+","+","-",1017,{"v":0.987,"d":"98.70%"},7,6,1,{"v":0.061937,"d":"0.062"},{"v":0.00209887,"d":"0.0021"},"gi|225464619|ref|XP_002275817.1|","PREDICTED: uncharacterized protein P11E10.01 [Vitis vinifera]","gi|359490462|ref|XM_002275781.2|","PREDICTED: Vitis vinifera uncharacterized LOC100259461 (LOC100259461), mRNA","sp|Q9LVN1|FH13_ARATH","Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=3","COG2423","Predicted ornithine cyclodeaminase, mu-crystallin homolog","K01051","gmx:100776781","pectinesterase [EC:3.1.1.11]","GO:0009627//systemic acquired resistance;GO:0034976//response to endoplasmic reticulum stress","GO:0008473//ornithine cyclodeaminase activity;GO:0005212//structural constituent of eye lens;GO:0000166//nucleotide binding","GO:0009507//chloroplast"]
[217,"CSE_Unigene6332","SW_Unigene8954","+","+","-",633,{"v":0.987,"d":"98.70%"},8,3,5,{"v":0.563003,"d":"0.563"},{"v":0.329558,"d":"0.3296"},"gi|225424940|ref|XP_002263763.1|","PREDICTED: uncharacterized protein MJ0044 [Vitis vinifera] >gi|296088284|emb|CBI36510.3| unnamed protein product [Vitis vinifera]","gi|359494689|ref|XM_002263727.2|","PREDICTED: Vitis vinifera uncharacterized LOC100247979 (LOC100247979), mRNA","-","-","COG1608","Predicted archaeal kinase","K12657","mtr:MTR_4g020450","delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41]","GO:0008652//cellular amino acid biosynthetic process;GO:0016310//phosphorylation","GO:0016301//kinase activity","GO:0005737//cytoplasm"]
[218,"CSE_Unigene789","SW_Unigene12044","+","+","-",1569,{"v":0.994,"d":"99.40%"},9,3,6,{"v":0.470679,"d":"0.471"},{"v":0.238008,"d":"0.2380"},"gi|359494703|ref|XP_002269379.2|","PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like [Vitis vinifera]","gi|359494702|ref|XM_002269343.2|","PREDICTED: Vitis vinifera ubiquinone biosynthesis monooxygenase COQ6-like (LOC100248856), mRNA","sp|Q8RWY3|ISW2_ARATH","Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis thaliana GN=At3g06400 PE=2 SV=3","COG0654","2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases","K06126","vvi:100248856","ubiquinone biosynthesis monooxygenase Coq6 [EC:1.14.13.-]","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0006744//ubiquinone biosynthetic process;GO:0055114//oxidation-reduction process","GO:0050660//flavin adenine dinucleotide binding;GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","GO:0005739//mitochondrion"]
[219,"CSE_Unigene14164","SW_Unigene13879","-","-","+(Mostly)",474,{"v":0.987,"d":"98.70%"},6,4,2,{"v":0.168343,"d":"0.168"},{"v":0.0397151,"d":"0.0397"},"gi|225448279|ref|XP_002274773.1|","PREDICTED: nudC domain-containing protein 2 [Vitis vinifera] >gi|296086806|emb|CBI32955.3| unnamed protein product [Vitis vinifera]","gi|225448278|ref|XM_002274737.1|","PREDICTED: Vitis vinifera nudC domain-containing-like (LOC100247442), mRNA","sp|Q9STN7|BOB2_ARATH","Protein BOBBER 2 OS=Arabidopsis thaliana GN=BOB2 PE=2 SV=1","-","-","-","-","-","-","-","GO:0005737//cytoplasm"]
[220,"CSE_Unigene10796","SW_Unigene7053","-","-","+(Mostly)",981,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|359497083|ref|XP_003635420.1|","PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Vitis vinifera]","gi|349710511|emb|FQ396174.1|","Vitis vinifera clone SS0AFA11YI03","-","-","COG3239","Fatty acid desaturase","K04712","vvi:100854247","sphingolipid delta-4 desaturase [EC:1.14.-.-]","GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0030148//sphingolipid biosynthetic process;GO:0009860//pollen tube growth;GO:0009827//plant-type cell wall modification","GO:0042284//sphingolipid delta-4 desaturase activity","GO:0016021//integral to membrane"]
[221,"CSE_Unigene13835","SW_Unigene21917","-","-","+(Mostly)",693,{"v":0.994,"d":"99.40%"},4,2,2,{"v":0.329207,"d":"0.329"},{"v":0.255403,"d":"0.2554"},"gi|359497145|ref|XP_002264869.2|","PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis vinifera] >gi|296088907|emb|CBI38456.3| unnamed protein product [Vitis vinifera]","gi|349709385|emb|FQ385555.1|","Vitis vinifera clone SS0AEB31YN16","sp|Q8RXX5|RK192_ARATH","50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1","COG0335","Ribosomal protein L19","-","-","-","GO:0010103//stomatal complex morphogenesis;GO:0009793//embryo development ending in seed dormancy;GO:0006412//translation;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0051607//defense response to virus;GO:0016226//iron-sulfur cluster assembly;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0048481//ovule development;GO:0042254//ribosome biogenesis;GO:0010027//thylakoid membrane organization","GO:0003735//structural constituent of ribosome;GO:0003723//RNA binding","GO:0009941//chloroplast envelope;GO:0016020//membrane;GO:0005840//ribosome;GO:0009570//chloroplast stroma"]
[222,"CSE_Unigene5267","SW_Unigene23335","-","-","+(Mostly)",1227,{"v":0.992,"d":"99.20%"},10,6,4,{"v":0.17993,"d":"0.180"},{"v":0.00907752,"d":"0.0091"},"gi|359495466|ref|XP_002277046.2|","PREDICTED: telomerase Cajal body protein 1-like [Vitis vinifera] >gi|302144185|emb|CBI23312.3| unnamed protein product [Vitis vinifera]","gi|359495465|ref|XM_002277010.2|","PREDICTED: Vitis vinifera telomerase Cajal body protein 1-like (LOC100267300), mRNA","sp|Q8H0T9|KTNB1_ARATH","Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3","COG2319","FOG: WD40 repeat","K14963","gmx:100794027","COMPASS component SWD3","-","GO:0000166//nucleotide binding","GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005737//cytoplasm"]
[223,"CSE_CL5376_Contig1","SW_Unigene943","-","-","+(Mostly)",2097,{"v":0.99,"d":"99.00%"},20,8,12,{"v":0.457163,"d":"0.457"},{"v":0.10273,"d":"0.1027"},"gi|359495626|ref|XP_002269600.2|","PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Vitis vinifera]","gi|359495625|ref|XM_002269564.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like (LOC100259703), mRNA","sp|Q8GWE0|PP314_ARATH","Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0031425//chloroplast RNA processing;GO:0009658//chloroplast organization;GO:0045727//positive regulation of translation;GO:0045036//protein targeting to chloroplast","-","GO:0009570//chloroplast stroma"]
[224,"CSE_Unigene17637","SW_Unigene5314","-","-","+(Mostly)",1728,{"v":0.987,"d":"98.70%"},20,{"v":6.60581,"d":"7"},{"v":13.3942,"d":"13"},{"v":0.550402,"d":"0.550"},{"v":0.159241,"d":"0.1592"},"gi|359495826|ref|XP_002265825.2|","PREDICTED: protease Do-like 10, mitochondrial-like [Vitis vinifera] >gi|296086873|emb|CBI33040.3| unnamed protein product [Vitis vinifera]","gi|359495825|ref|XM_002265789.2|","PREDICTED: Vitis vinifera protease Do-like 10, mitochondrial-like (LOC100250366), mRNA","sp|Q9FIV6|DGP10_ARATH","Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana GN=DEGP10 PE=2 SV=1","COG0265","Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain","K01362","cme:CMD006C","[EC:3.4.21.-]","GO:0006508//proteolysis","GO:0004252//serine-type endopeptidase activity","GO:0009535//chloroplast thylakoid membrane;GO:0005739//mitochondrion"]
[225,"CSE_Unigene15335","SW_Unigene13698","-","-","+(Mostly)",876,{"v":0.995,"d":"99.50%"},4,3,1,{"v":0.104737,"d":"0.105"},{"v":0.0421465,"d":"0.0421"},"gi|225468850|ref|XP_002266252.1|","PREDICTED: putative oxidoreductase GLYR1 isoform 1 [Vitis vinifera] >gi|147861759|emb|CAN78910.1| hypothetical protein VITISV_032948 [Vitis vinifera] >gi|297736660|emb|CBI25677.3| unnamed protein product [Vitis vinifera]","gi|470116328|ref|XM_004294287.1|","PREDICTED: Fragaria vesca subsp. vesca glyoxylate/succinic semialdehyde reductase 1-like (LOC101294441), mRNA","sp|Q9LSV0|GLYR1_ARATH","Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis thaliana GN=GLYR1 PE=1 SV=1","COG2084","3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases","K00020","olu:OSTLU_45774","3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]","GO:0006979//response to oxidative stress;GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006573//valine metabolic process;GO:0009448//gamma-aminobutyric acid metabolic process;GO:0007020//microtubule nucleation;GO:0019344//cysteine biosynthetic process","GO:0008442//3-hydroxyisobutyrate dehydrogenase activity;GO:0008679//2-hydroxy-3-oxopropionate reductase activity;GO:0000166//nucleotide binding;GO:0004616//phosphogluconate dehydrogenase (decarboxylating) activity;GO:0050662//coenzyme binding;GO:0003858//3-hydroxybutyrate dehydrogenase activity","GO:0005829//cytosol;GO:0005739//mitochondrion"]
[226,"CSE_Unigene17424","SW_CL5742_Contig1","-","-","+(Mostly)",651,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.315066,"d":"0.315"},{"v":0.365482,"d":"0.3655"},"gi|359496063|ref|XP_002270399.2|","PREDICTED: autophagy-related protein 101 [Vitis vinifera] >gi|297735844|emb|CBI18564.3| unnamed protein product [Vitis vinifera]","gi|359496062|ref|XM_002270363.2|","PREDICTED: Vitis vinifera autophagy-related protein 101-like (LOC100265795), mRNA","-","-","-","-","-","-","-","-","GO:0016772//transferase activity, transferring phosphorus-containing groups;GO:0000166//nucleotide binding","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[227,"CSE_Unigene18166","SW_Unigene22037","-","-","+(Mostly)",975,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.307904,"d":"0.308"},{"v":0.235323,"d":"0.2353"},"gi|225469300|ref|XP_002269258.1|","PREDICTED: nuclease S1 [Vitis vinifera]","gi|359496320|ref|XM_002269222.2|","PREDICTED: Vitis vinifera nuclease S1-like (LOC100265776), mRNA","sp|F4JJL0|ENDO4_ARATH","Endonuclease 4 OS=Arabidopsis thaliana GN=ENDO4 PE=3 SV=1","-","-","-","-","-","GO:0006308//DNA catabolic process;GO:0009827//plant-type cell wall modification;GO:0010106//cellular response to iron ion starvation;GO:0015706//nitrate transport;GO:0006826//iron ion transport;GO:0010167//response to nitrate;GO:0048481//ovule development;GO:0009860//pollen tube growth;GO:0048441//petal development;GO:0016132//brassinosteroid biosynthetic process;GO:0048443//stamen development","GO:0003676//nucleic acid binding;GO:0000014//single-stranded DNA specific endodeoxyribonuclease activity;GO:0043765//T/G mismatch-specific endonuclease activity","GO:0005576//extracellular region"]
[228,"CSE_Unigene981","SW_CL3988_Contig3","-","-","+(Mostly)",945,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.118714,"d":"0.119"},{"v":0.0539566,"d":"0.0540"},"gi|359496682|ref|XP_003635299.1|","PREDICTED: protein CbbY-like [Vitis vinifera]","gi|359496681|ref|XM_003635251.1|","PREDICTED: Vitis vinifera protein CbbY-like (LOC100853189), mRNA","-","-","COG0637","Predicted phosphatase/phosphohexomutase","K00861","bdi:100832727","riboflavin kinase [EC:2.7.1.26]","GO:0019761//glucosinolate biosynthetic process","GO:0016787//hydrolase activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[229,"CSE_Unigene18978","SW_Unigene15191","-","-","+(Mostly)",3399,{"v":0.994,"d":"99.40%"},19,9,10,{"v":0.304007,"d":"0.304"},{"v":0.010927,"d":"0.0109"},"gi|225465133|ref|XP_002273767.1|","PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]","gi|225465132|ref|XM_002273731.1|","PREDICTED: Vitis vinifera peroxisome biogenesis protein 1-like (LOC100259773), mRNA","sp|Q9FNP1|PEX1_ARATH","Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=2","COG0464","ATPases of the AAA+ class","K13338","vvi:100259773","peroxin-1","GO:0016558//protein import into peroxisome matrix;GO:0006635//fatty acid beta-oxidation","GO:0005524//ATP binding;GO:0008568//microtubule-severing ATPase activity;GO:0005515//protein binding","GO:0005778//peroxisomal membrane;GO:0005886//plasma membrane"]
[230,"CSE_CL5463_Contig1","SW_CL5669_Contig1","-","-","+(Mostly)",1347,{"v":0.99,"d":"99.00%"},14,8,6,{"v":0.213007,"d":"0.213"},{"v":0.00490013,"d":"0.0049"},"gi|302143251|emb|CBI20546.3|","unnamed protein product [Vitis vinifera]","gi|225465122|ref|XM_002273003.1|","PREDICTED: Vitis vinifera BRCA1-associated protein-like (LOC100242688), mRNA","sp|Q8LFY8|ATL54_ARATH","RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2","COG1318","Predicted transcriptional regulators","K10632","vvi:100242688","BRCA1-associated protein [EC:6.3.2.19]","GO:0010029//regulation of seed germination;GO:0016567//protein ubiquitination;GO:0009688//abscisic acid biosynthetic process","GO:0008270//zinc ion binding;GO:0043130//ubiquitin binding;GO:0004842//ubiquitin-protein ligase activity;GO:0046982//protein heterodimerization activity;GO:0016787//hydrolase activity","GO:0000151//ubiquitin ligase complex"]
[231,"CSE_Unigene850","SW_Unigene15032","-","-","+(Mostly)",600,{"v":0.988,"d":"98.80%"},7,3,4,{"v":0.332429,"d":"0.332"},{"v":0.149289,"d":"0.1493"},"gi|225463085|ref|XP_002263568.1|","PREDICTED: hypoxanthine-guanine phosphoribosyltransferase [Vitis vinifera] >gi|147785106|emb|CAN75448.1| hypothetical protein VITISV_030928 [Vitis vinifera] >gi|297739372|emb|CBI29362.3| unnamed protein product [Vitis vinifera]","gi|359495184|ref|XM_002263532.2|","PREDICTED: Vitis vinifera hypoxanthine-guanine phosphoribosyltransferase-like (LOC100242653), mRNA","-","-","COG0634","Hypoxanthine-guanine phosphoribosyltransferase","K00760","vvi:100242653","hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]","GO:0032264//IMP salvage;GO:0006166//purine ribonucleoside salvage;GO:0032263//GMP salvage;GO:0009845//seed germination;GO:0006178//guanine salvage;GO:0006168//adenine salvage;GO:0046100//hypoxanthine metabolic process","GO:0052657//guanine phosphoribosyltransferase activity;GO:0004422//hypoxanthine phosphoribosyltransferase activity;GO:0000287//magnesium ion binding","GO:0005829//cytosol"]
[232,"CSE_Unigene16616","SW_Unigene15779","-","-","+(Mostly)",999,{"v":0.989,"d":"98.90%"},8,5,3,{"v":0.225493,"d":"0.225"},{"v":0.0400164,"d":"0.0400"},"gi|297740945|emb|CBI31257.3|","unnamed protein product [Vitis vinifera]","gi|225460076|ref|XR_077746.1|","PREDICTED: Vitis vinifera TVP38/TMEM64 family membrane protein slr0305-like (LOC100246522), miscRNA","-","-","COG0398","Uncharacterized conserved protein","-","-","-","GO:0010264//myo-inositol hexakisphosphate biosynthetic process","-","GO:0009507//chloroplast"]
[233,"CSE_Unigene11519","SW_CL7972_Contig1","-","-","+(Mostly)",750,{"v":0.974,"d":"97.40%"},8,5,3,{"v":0.196021,"d":"0.196"},{"v":0.0262123,"d":"0.0262"},"gi|225467979|ref|XP_002269050.1|","PREDICTED: U-box domain-containing protein 33 [Vitis vinifera]","gi|225467978|ref|XM_002269014.1|","PREDICTED: Vitis vinifera U-box domain-containing protein 33-like (LOC100244702), mRNA","sp|Q8GUH1|PUB33_ARATH","U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2","-","-","-","-","-","GO:0006950//response to stress","-","-"]
[234,"CSE_Unigene18169","SW_Unigene22258","-","-","+(Mostly)",867,{"v":0.994,"d":"99.40%"},5,4,1,{"v":0.093991,"d":"0.094"},{"v":0.0206508,"d":"0.0207"},"gi|225444450|ref|XP_002271487.1|","PREDICTED: uncharacterized protein LOC100250291 [Vitis vinifera]","gi|359494824|ref|XM_002271451.2|","PREDICTED: Vitis vinifera uncharacterized LOC100250291 (LOC100250291), mRNA","-","-","-","-","-","-","-","GO:0046786//viral replication complex formation and maintenance;GO:0006914//autophagy","-","GO:0005886//plasma membrane;GO:0005774//vacuolar membrane"]
[235,"CSE_Unigene17636","SW_Unigene8787","-","-","+(Mostly)",1191,{"v":0.994,"d":"99.40%"},7,4,3,{"v":0.18593,"d":"0.186"},{"v":0.0329687,"d":"0.0330"},"gi|359494840|ref|XP_003634851.1|","PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Vitis vinifera]","gi|123671853|emb|AM426541.1|","Vitis vinifera contig VV78X275378.15, whole genome shotgun sequence","sp|Q8LE47|PPR87_ARATH","Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006333//chromatin assembly or disassembly;GO:0006355//regulation of transcription, DNA-dependent","GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0016020//membrane;GO:0005739//mitochondrion"]
[236,"CSE_Unigene21345","SW_Unigene23151","-","-","+(Mostly)",942,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.342932,"d":"0.343"},{"v":0.267471,"d":"0.2675"},"gi|359494866|ref|XP_003634858.1|","PREDICTED: monoglyceride lipase-like [Vitis vinifera] >gi|147852280|emb|CAN82216.1| hypothetical protein VITISV_020423 [Vitis vinifera]","gi|147852278|emb|AM427761.2|","Vitis vinifera contig VV78X163834.9, whole genome shotgun sequence","-","-","COG2267","Lysophospholipase","-","-","-","-","GO:0047372//acylglycerol lipase activity","GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[237,"CSE_Unigene17942","SW_Unigene1867","-","-","+(Mostly)",1224,{"v":0.996,"d":"99.60%"},5,2,3,{"v":0.672201,"d":"0.672"},{"v":0.489053,"d":"0.4891"},"gi|359494758|ref|XP_002263684.2|","PREDICTED: uncharacterized sodium-dependent transporter yocS-like [Vitis vinifera] >gi|297742832|emb|CBI35586.3| unnamed protein product [Vitis vinifera]","gi|359494757|ref|XM_002263648.2|","PREDICTED: Vitis vinifera uncharacterized LOC100256899 (LOC100256899), mRNA","sp|Q8RXE8|BASS3_ARATH","Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Arabidopsis thaliana GN=BASS3 PE=2 SV=1","COG0385","Predicted Na+-dependent transporter","K03453","osa:4329356","bile acid:Na+ symporter, BASS family","GO:0006814//sodium ion transport","GO:0008508//bile acid:sodium symporter activity","GO:0009507//chloroplast;GO:0016020//membrane"]
[238,"CSE_Unigene12856","SW_Unigene11074","-","-","+(Mostly)",1149,{"v":0.991,"d":"99.10%"},10,3,7,{"v":1.02473,"d":"1.025"},{"v":0.974127,"d":"0.9741"},"gi|225467372|ref|XP_002267529.1|","PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Vitis vinifera]","gi|225467371|ref|XM_002267493.1|","PREDICTED: Vitis vinifera protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like (LOC100243798), mRNA","sp|Q943I6|STOP1_ORYSJ","Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1","-","-","-","-","-","-","-","-"]
[239,"CSE_Unigene8417","SW_Unigene11853","-","-","+(Mostly)",759,{"v":0.995,"d":"99.50%"},4,3,1,{"v":0.120274,"d":"0.120"},{"v":0.0554921,"d":"0.0555"},"gi|225449889|ref|XP_002266769.1|","PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like [Vitis vinifera]","gi|225449888|ref|XM_002266733.1|","PREDICTED: Vitis vinifera UPF0551 protein C8orf38 homolog, mitochondrial-like (LOC100255053), mRNA","-","-","COG1562","Phytoene/squalene synthetase","-","-","-","GO:0006457//protein folding;GO:0009058//biosynthetic process;GO:0006626//protein targeting to mitochondrion;GO:0009408//response to heat;GO:0009644//response to high light intensity;GO:0042542//response to hydrogen peroxide","GO:0016740//transferase activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[240,"CSE_Unigene19262","SW_Unigene3979","-","-","+(Mostly)",1617,{"v":0.995,"d":"99.50%"},8,3,5,{"v":0.556372,"d":"0.556"},{"v":0.323191,"d":"0.3232"},"gi|225433320|ref|XP_002285561.1|","PREDICTED: carboxyl-terminal-processing protease [Vitis vinifera] >gi|296088261|emb|CBI35769.3| unnamed protein product [Vitis vinifera]","gi|359494724|ref|XM_002285525.2|","PREDICTED: Vitis vinifera carboxyl-terminal-processing protease-like (LOC100252881), mRNA","sp|O04073|CTPA_SCEOB","C-terminal processing peptidase, chloroplastic OS=Scenedesmus obliquus GN=ctpA PE=1 SV=1","COG0793","Periplasmic protease","-","-","-","GO:0035556//intracellular signal transduction;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0006508//proteolysis","GO:0008236//serine-type peptidase activity","GO:0005739//mitochondrion;GO:0005576//extracellular region;GO:0009543//chloroplast thylakoid lumen"]
[241,"CSE_Unigene298","SW_Unigene16801","-","-","+(Mostly)",1557,{"v":0.996,"d":"99.60%"},7,3,4,{"v":0.307705,"d":"0.308"},{"v":0.0267282,"d":"0.0267"},"gi|225424625|ref|XP_002282301.1|","PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial [Vitis vinifera] >gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]","gi|123681713|emb|AM467925.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X050705.8, clone ENTAV 115","sp|Q9SAD9|PPR40_ARATH","Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0009688//abscisic acid biosynthetic process","-","GO:0005886//plasma membrane;GO:0005774//vacuolar membrane;GO:0005739//mitochondrion"]
[242,"CSE_Unigene14953","SW_CL203_Contig5","-","-","+(Mostly)",825,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.184401,"d":"0.184"},{"v":0.159873,"d":"0.1599"},"gi|225425178|ref|XP_002265340.1|","PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Vitis vinifera] >gi|296088718|emb|CBI38168.3| unnamed protein product [Vitis vinifera]","gi|359473795|ref|XM_002265304.2|","PREDICTED: Vitis vinifera delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like (LOC100249010), mRNA","sp|Q39659|MFPA_CUCSA","Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis sativus PE=1 SV=1","COG1024","Enoyl-CoA hydratase/carnithine racemase","K12663","vvi:100249010","delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]","GO:0006457//protein folding;GO:0006635//fatty acid beta-oxidation;GO:0000413//protein peptidyl-prolyl isomerization","GO:0051750//delta3,5-delta2,4-dienoyl-CoA isomerase activity;GO:0003755//peptidyl-prolyl cis-trans isomerase activity;GO:0004300//enoyl-CoA hydratase activity","GO:0005777//peroxisome;GO:0005739//mitochondrion"]
[243,"CSE_Unigene14307","SW_Unigene11028","-","-","+(Mostly)",630,{"v":0.987,"d":"98.70%"},8,4,4,{"v":0.290307,"d":"0.290"},{"v":0.0843026,"d":"0.0843"},"gi|147864421|emb|CAN82642.1|","hypothetical protein VITISV_024902 [Vitis vinifera]","gi|359473834|ref|XM_002272026.2|","PREDICTED: Vitis vinifera uncharacterized LOC100264392, transcript variant 2 (LOC100264392), mRNA","sp|F4KF27|MDA2_ARATH","Mediator-associated protein 2 OS=Arabidopsis thaliana GN=At5g64680 PE=1 SV=1","-","-","-","-","-","-","-","-"]
[244,"CSE_Unigene20231","SW_Unigene5338","-","-","+(Mostly)",1896,{"v":0.986,"d":"98.60%"},26,16,10,{"v":0.248926,"d":"0.249"},{"v":0.000470394,"d":"0.0005"},"gi|225425292|ref|XP_002272176.1|","PREDICTED: probable peptide/nitrate transporter At5g13400 [Vitis vinifera]","gi|359473835|ref|XM_002272140.2|","PREDICTED: Vitis vinifera probable peptide/nitrate transporter At5g13400-like (LOC100259213), mRNA","sp|Q9LYR6|PTR49_ARATH","Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1","COG3104","Dipeptide/tripeptide permease","K14638","smo:SELMODRAFT_448814","solute carrier family 15 (peptide/histidine transporter), member 3/4","GO:0006857//oligopeptide transport","GO:0005215//transporter activity","GO:0016021//integral to membrane;GO:0005886//plasma membrane"]
[245,"CSE_Unigene16769","SW_Unigene6816","-","-","+(Mostly)",861,{"v":0.995,"d":"99.50%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225425356|ref|XP_002275396.1|","PREDICTED: U2 small nuclear ribonucleoprotein A&apos; [Vitis vinifera] >gi|296085571|emb|CBI29303.3| unnamed protein product [Vitis vinifera]","gi|225425355|ref|XM_002275360.1|","PREDICTED: Vitis vinifera U2 small nuclear ribonucleoprotein A'-like (LOC100264276), mRNA","sp|P43333|RU2A_ARATH","U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana GN=At1g09760 PE=2 SV=2","COG4886","Leucine-rich repeat (LRR) protein","K11092","vvi:100264276","U2 small nuclear ribonucleoprotein A'","GO:0009409//response to cold;GO:0000398//mRNA splicing, via spliceosome","GO:0003676//nucleic acid binding","GO:0005730//nucleolus;GO:0015030//Cajal body;GO:0009507//chloroplast;GO:0030529//ribonucleoprotein complex"]
[246,"CSE_Unigene15904","SW_Unigene21971","-","-","+(Mostly)",1305,{"v":0.995,"d":"99.50%"},7,4,3,{"v":0.228622,"d":"0.229"},{"v":0.0568635,"d":"0.0569"},"gi|225462932|ref|XP_002266329.1|","PREDICTED: dual specificity protein kinase pyk1 isoform 1 [Vitis vinifera] >gi|296087790|emb|CBI35046.3| unnamed protein product [Vitis vinifera]","gi|359473461|ref|XM_002266293.2|","PREDICTED: Vitis vinifera dual specificity protein kinase pyk1-like, transcript variant 1 (LOC100242045), mRNA","sp|Q9FPR3|EDR1_ARATH","Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K04424","aly:ARALYDRAFT_909157","sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]","GO:0031348//negative regulation of defense response;GO:0009867//jasmonic acid mediated signaling pathway;GO:0009862//systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0009414//response to water deprivation;GO:0010363//regulation of plant-type hypersensitive response;GO:0009734//auxin mediated signaling pathway;GO:0006612//protein targeting to membrane;GO:0050832//defense response to fungus;GO:0043069//negative regulation of programmed cell death;GO:0042538//hyperosmotic salinity response;GO:0006468//protein phosphorylation;GO:0000165//MAPK cascade;GO:0009742//brassinosteroid mediated signaling pathway;GO:0009966//regulation of signal transduction;GO:0009409//response to cold;GO:0009738//abscisic acid mediated signaling pathway;GO:0010305//leaf vascular tissue pattern formation;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009723//response to ethylene stimulus","GO:0004715//non-membrane spanning protein tyrosine kinase activity;GO:0004712//protein serine/threonine/tyrosine kinase activity;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding","GO:0005829//cytosol;GO:0005634//nucleus"]
[247,"CSE_CL4854_Contig1","SW_Unigene8660","-","-","+(Mostly)",1449,{"v":0.993,"d":"99.30%"},10,2,8,{"v":1.58402,"d":"1.584"},{"v":0.69871,"d":"0.6987"},"gi|225462926|ref|XP_002267249.1|","PREDICTED: probable ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Vitis vinifera] >gi|296087793|emb|CBI35049.3| unnamed protein product [Vitis vinifera]","gi|225462925|ref|XM_002267213.1|","PREDICTED: Vitis vinifera probable ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like (LOC100243771), mRNA","sp|Q9XI84|RBCMT_ARATH","[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1","-","-","K00592","aly:ARALYDRAFT_471564","[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]","GO:0006655//phosphatidylglycerol biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0019252//starch biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009902//chloroplast relocation;GO:0000023//maltose metabolic process;GO:0018023//peptidyl-lysine trimethylation;GO:0016226//iron-sulfur cluster assembly;GO:0034660//ncRNA metabolic process;GO:0009073//aromatic amino acid family biosynthetic process;GO:0034968//histone lysine methylation;GO:0010027//thylakoid membrane organization","GO:0030785//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity;GO:0018024//histone-lysine N-methyltransferase activity","GO:0009570//chloroplast stroma"]
[248,"CSE_Unigene3959","SW_Unigene26304","-","-","+(Mostly)",459,{"v":0.503,"d":"50.30%"},228,{"v":74.8469,"d":"75"},{"v":153.153,"d":"153"},{"v":0.18219,"d":"0.182"},{"v":9.54088e-11,"d":"0.0000"},"gi|359473521|ref|XP_002273398.2|","PREDICTED: putative pentatricopeptide repeat-containing protein At2g02150-like [Vitis vinifera]","gi|147803291|emb|AM487966.2|","Vitis vinifera contig VV78X206601.18, whole genome shotgun sequence","sp|Q9ZUA2|PP141_ARATH","Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[249,"CSE_Unigene6996","SW_Unigene26890","-","-","+(Mostly)",621,{"v":0.992,"d":"99.20%"},5,5,"NA",{"v":0,"d":"0.000"},"NA","gi|225425890|ref|XP_002270903.1|","PREDICTED: mitotic spindle checkpoint protein MAD2 isoform 1 [Vitis vinifera] >gi|297738345|emb|CBI27546.3| unnamed protein product [Vitis vinifera]","gi|359473707|ref|XM_002270867.2|","PREDICTED: Vitis vinifera mitotic spindle checkpoint protein MAD2-like, transcript variant 1 (LOC100254488), mRNA","sp|Q9LU93|MAD2_ARATH","Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana GN=MAD2 PE=2 SV=1","-","-","K02537","vvi:100254488","mitotic spindle assembly checkpoint protein MAD2","GO:0051788//response to misfolded protein;GO:0043161//proteasomal ubiquitin-dependent protein catabolic process;GO:0008283//cell proliferation;GO:0051301//cell division;GO:0051510//regulation of unidimensional cell growth;GO:0042023//DNA endoreduplication;GO:0048235//pollen sperm cell differentiation;GO:0016572//histone phosphorylation;GO:0007094//mitotic spindle assembly checkpoint;GO:0043248//proteasome assembly","GO:0005515//protein binding;GO:0003677//DNA binding","GO:0010369//chromocenter;GO:0005737//cytoplasm;GO:0000776//kinetochore;GO:0005635//nuclear envelope"]
[250,"CSE_CL205_Contig1","SW_CL2934_Contig1","-","-","+(Mostly)",1152,{"v":0.997,"d":"99.70%"},4,"NA",4,"NA","NA","gi|359473738|ref|XP_002272591.2|","PREDICTED: LOW QUALITY PROTEIN: probable glycosyltransferase At5g25310-like [Vitis vinifera]","gi|359473737|ref|XM_002272555.2|","PREDICTED: Vitis vinifera probable glycosyltransferase At5g25310-like (LOC100260931), mRNA","sp|Q9SSE8|GLYT1_ARATH","Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1","-","-","-","-","-","-","GO:0003824//catalytic activity","GO:0016020//membrane;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005794//Golgi apparatus"]
[251,"CSE_CL7421_Contig1","SW_Unigene7603","-","-","+(Mostly)",1080,{"v":0.993,"d":"99.30%"},8,5,3,{"v":0.22106,"d":"0.221"},{"v":0.0379747,"d":"0.0380"},"gi|225425416|ref|XP_002277768.1|","PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis vinifera] >gi|297738457|emb|CBI27658.3| unnamed protein product [Vitis vinifera]","gi|225425415|ref|XM_002277732.1|","PREDICTED: Vitis vinifera alpha-ketoglutarate-dependent dioxygenase alkB-like (LOC100243727), mRNA","sp|Q9SA98|ALKBH_ARATH","Alpha-ketoglutarate-dependent dioxygenase alkB OS=Arabidopsis thaliana GN=At1g11780 PE=2 SV=2","COG3145","Alkylated DNA repair protein","K10765","vvi:100243727","alkylated DNA repair protein alkB homolog 1 [EC:1.14.11.- 4.2.99.18]","GO:0055114//oxidation-reduction process","GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","GO:0005634//nucleus"]
[252,"CSE_Unigene13545","SW_Unigene22083","-","-","+(Mostly)",1131,{"v":0.985,"d":"98.50%"},11,7,4,{"v":0.224619,"d":"0.225"},{"v":0.0155446,"d":"0.0155"},"gi|359472593|ref|XP_002281277.2|","PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]","gi|359472592|ref|XM_002281241.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261060 (LOC100261060), mRNA","sp|Q8GUU2|RIE1_ARATH","E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1","COG5540","RING-finger-containing ubiquitin ligase","K13148","vvi:100261060","integrator complex subunit 11 [EC:3.1.27.-]","GO:0006661//phosphatidylinositol biosynthetic process","GO:0016787//hydrolase activity;GO:0008270//zinc ion binding","GO:0005886//plasma membrane;GO:0005774//vacuolar membrane"]
[253,"CSE_Unigene6460","SW_Unigene8147","-","-","+(Mostly)",570,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.344196,"d":"0.344"},{"v":0.382304,"d":"0.3823"},"gi|225424301|ref|XP_002284666.1|","PREDICTED: uncharacterized protein LOC100259429 [Vitis vinifera] >gi|297737670|emb|CBI26871.3| unnamed protein product [Vitis vinifera]","gi|359472844|ref|XM_002284630.2|","PREDICTED: Vitis vinifera uncharacterized LOC100259429 (LOC100259429), mRNA","-","-","-","-","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0009773//photosynthetic electron transport in photosystem I;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport","GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","GO:0042651//thylakoid membrane"]
[254,"CSE_Unigene15444","SW_Unigene11983","-","-","+(Mostly)",849,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225424246|ref|XP_002284469.1|","PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 [Vitis vinifera] >gi|297737693|emb|CBI26894.3| unnamed protein product [Vitis vinifera]","gi|359472863|ref|XM_002284433.2|","PREDICTED: Vitis vinifera phytanoyl-CoA dioxygenase domain-containing protein 1-like (LOC100254163), mRNA","-","-","COG5285","Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin","K01190","ota:Ot07g03490","beta-galactosidase [EC:3.2.1.23]","-","GO:0048244//phytanoyl-CoA dioxygenase activity;GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","GO:0005886//plasma membrane"]
[255,"CSE_Unigene13063","SW_CL6064_Contig1","-","-","+(Mostly)",855,{"v":0.995,"d":"99.50%"},4,2,2,{"v":0.315529,"d":"0.316"},{"v":0.242584,"d":"0.2426"},"gi|225424003|ref|XP_002282829.1|","PREDICTED: nuclease S1 isoform 1 [Vitis vinifera] >gi|297737807|emb|CBI27008.3| unnamed protein product [Vitis vinifera]","gi|225424002|ref|XM_002282793.1|","PREDICTED: Vitis vinifera nuclease S1-like, transcript variant 1 (LOC100266396), mRNA","sp|Q9C9G4|ENDO2_ARATH","Endonuclease 2 OS=Arabidopsis thaliana GN=ENDO2 PE=2 SV=1","-","-","-","-","-","GO:0006308//DNA catabolic process","GO:0004519//endonuclease activity;GO:0003676//nucleic acid binding","GO:0016023//cytoplasmic membrane-bounded vesicle"]
[256,"CSE_Unigene11426","SW_Unigene22108","-","-","+(Mostly)",783,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.378397,"d":"0.378"},{"v":0.399142,"d":"0.3991"},"gi|359472952|ref|XP_002279311.2|","PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Vitis vinifera] >gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vinifera]","gi|349719749|emb|FQ381567.1|","Vitis vinifera clone SS0ABP1YE08","sp|P25873|RK15_ARATH","50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2","COG0200","Ribosomal protein L15","K02876","vvi:100268043","large subunit ribosomal protein L15","GO:0006354//DNA-dependent transcription, elongation;GO:0006412//translation","GO:0003735//structural constituent of ribosome","GO:0009941//chloroplast envelope;GO:0000311//plastid large ribosomal subunit;GO:0009570//chloroplast stroma"]
[257,"CSE_Unigene16918","SW_Unigene12181","-","-","+(Mostly)",1890,{"v":0.995,"d":"99.50%"},9,5,4,{"v":0.338557,"d":"0.339"},{"v":0.0963341,"d":"0.0963"},"gi|225423893|ref|XP_002281668.1|","PREDICTED: Di-glucose binding protein with Leucine-rich repeat domain-like [Vitis vinifera] >gi|297737862|emb|CBI27063.3| unnamed protein product [Vitis vinifera]","gi|359472986|ref|XM_002281632.2|","PREDICTED: Vitis vinifera Di-glucose binding protein with Leucine-rich repeat domain-like (LOC100267996), mRNA","sp|Q9FZB8|Y5181_ARATH","Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1","-","-","K13420","aly:ARALYDRAFT_356368","LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]","GO:0016310//phosphorylation","GO:0016301//kinase activity","GO:0005802//trans-Golgi network;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005773//vacuole;GO:0005794//Golgi apparatus;GO:0005768//endosome;GO:0005886//plasma membrane"]
[258,"CSE_Unigene16484","SW_Unigene8166","-","-","+(Mostly)",1719,{"v":0.995,"d":"99.50%"},8,7,1,{"v":0.0451923,"d":"0.045"},{"v":0.00028847,"d":"0.0003"},"gi|225423883|ref|XP_002281563.1|","PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform 1 [Vitis vinifera]","gi|359472992|ref|XM_002281527.2|","PREDICTED: Vitis vinifera serine/threonine-protein kinase STN7, chloroplastic-like, transcript variant 1 (LOC100255959), mRNA","sp|Q9S713|STT7_ARATH","Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K08282","cme:CMS463C","non-specific serine/threonine protein kinase [EC:2.7.11.1]","GO:0006468//protein phosphorylation;GO:0007623//circadian rhythm;GO:0015996//chlorophyll catabolic process;GO:0042548//regulation of photosynthesis, light reaction","GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding","GO:0009507//chloroplast"]
[259,"CSE_CL1793_Contig1","SW_Unigene7266","-","-","+(Mostly)",3633,{"v":0.994,"d":"99.40%"},20,9,11,{"v":0.359018,"d":"0.359"},{"v":0.0230907,"d":"0.0231"},"gi|359472721|ref|XP_002277950.2|","PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like [Vitis vinifera]","gi|359472720|ref|XM_002277914.2|","PREDICTED: Vitis vinifera tRNA-specific adenosine deaminase, chloroplastic-like (LOC100259373), mRNA","sp|Q9S7I0|TADA_ARATH","tRNA-specific adenosine deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 SV=1","COG0590","Cytosine/adenosine deaminases","K15441","ota:Ot05g01940","tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]","GO:0008152//metabolic process","GO:0016787//hydrolase activity","GO:0043231//intracellular membrane-bounded organelle"]
[260,"CSE_CL1704_Contig1","SW_CL1535_Contig3","-","-","+(Mostly)",702,{"v":0.989,"d":"98.90%"},8,4,4,{"v":0.268257,"d":"0.268"},{"v":0.0685883,"d":"0.0686"},"gi|225423741|ref|XP_002277028.1|","PREDICTED: uncharacterized protein ypgQ [Vitis vinifera] >gi|147836213|emb|CAN75429.1| hypothetical protein VITISV_003303 [Vitis vinifera]","gi|225423740|ref|XM_002276992.1|","PREDICTED: Vitis vinifera uncharacterized LOC100249303 (LOC100249303), mRNA","-","-","COG1418","Predicted HD superfamily hydrolase","K06950","vvi:100249303","uncharacterized protein","GO:0008152//metabolic process","GO:0046872//metal ion binding;GO:0008081//phosphoric diester hydrolase activity","GO:0005634//nucleus"]
[261,"CSE_Unigene18254","SW_Unigene13634","-","-","+(Mostly)",1590,{"v":0.988,"d":"98.80%"},13,9,4,{"v":0.174811,"d":"0.175"},{"v":0.00259804,"d":"0.0026"},"gi|225423706|ref|XP_002277516.1|","PREDICTED: lecithine-cholesterol acyltransferase-like 4 [Vitis vinifera] >gi|297737965|emb|CBI27166.3| unnamed protein product [Vitis vinifera]","gi|225423705|ref|XM_002277480.1|","PREDICTED: Vitis vinifera lecithine-cholesterol acyltransferase-like 4 (LOC100255965), mRNA","sp|Q71N54|LCAT4_ARATH","Lecithine-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana GN=LCAT4 PE=2 SV=1","-","-","K06129","vvi:100260799","lysophospholipase III [EC:3.1.1.5]","GO:0006944//cellular membrane fusion;GO:0048193//Golgi vesicle transport;GO:0009395//phospholipid catabolic process","GO:0004607//phosphatidylcholine-sterol O-acyltransferase activity;GO:0004620//phospholipase activity","GO:0005829//cytosol"]
[262,"CSE_Unigene805","SW_Unigene8768","-","-","+(Mostly)",1104,{"v":0.999,"d":"99.90%"},1,"NA",1,"NA","NA","gi|225423700|ref|XP_002276697.1|","PREDICTED: phosphatase IMPL1, chloroplastic [Vitis vinifera] >gi|297737968|emb|CBI27169.3| unnamed protein product [Vitis vinifera]","gi|225423699|ref|XM_002276661.1|","PREDICTED: Vitis vinifera phosphatase IMPL1, chloroplastic-like (LOC100249170), mRNA","sp|Q94F00|IMPL1_ARATH","Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana GN=IMPL1 PE=1 SV=2","COG0483","Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family","K01092","vvi:100249170","myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]","GO:0006790//sulfur compound metabolic process;GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0046854//phosphatidylinositol phosphorylation","GO:0052833//inositol monophosphate 4-phosphatase activity;GO:0008441//3'(2'),5'-bisphosphate nucleotidase activity;GO:0052832//inositol monophosphate 3-phosphatase activity;GO:0008934//inositol monophosphate 1-phosphatase activity","GO:0005829//cytosol;GO:0005739//mitochondrion;GO:0009570//chloroplast stroma"]
[263,"CSE_Unigene16837","SW_Unigene1584","-","-","+(Mostly)",1860,{"v":0.994,"d":"99.40%"},12,8,4,{"v":0.17136,"d":"0.171"},{"v":0.00332743,"d":"0.0033"},"gi|359472534|ref|XP_002274321.2|","PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Vitis vinifera] >gi|297738080|emb|CBI27281.3| unnamed protein product [Vitis vinifera]","gi|359472533|ref|XM_002274285.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like (LOC100249185), mRNA","sp|Q9FZD1|PPR58_ARATH","Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidopsis thaliana GN=At1g26460 PE=1 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0009220//pyrimidine ribonucleotide biosynthetic process","-","GO:0005739//mitochondrion"]
[264,"CSE_Unigene13327","SW_Unigene22662","-","-","+(Mostly)",1134,{"v":0.992,"d":"99.20%"},9,4,5,{"v":0.43599,"d":"0.436"},{"v":0.183411,"d":"0.1834"},"gi|359473178|ref|XP_003631255.1|","PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Vitis vinifera]","gi|359473177|ref|XM_003631207.1|","PREDICTED: Vitis vinifera quinone oxidoreductase-like protein At1g23740, chloroplastic-like (LOC100852555), mRNA","sp|Q9ZUC1|QORL_ARATH","Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2","COG0604","NADPH:quinone reductase and related Zn-dependent oxidoreductases","K00344","osa:4331066","NADPH2:quinone reductase [EC:1.6.5.5]","GO:0009072//aromatic amino acid family metabolic process;GO:0000096//sulfur amino acid metabolic process;GO:0016117//carotenoid biosynthetic process;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0044272//sulfur compound biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006766//vitamin metabolic process;GO:0006546//glycine catabolic process;GO:0019748//secondary metabolic process;GO:0042742//defense response to bacterium;GO:0009106//lipoate metabolic process;GO:0015995//chlorophyll biosynthetic process;GO:0009108//coenzyme biosynthetic process;GO:0019216//regulation of lipid metabolic process;GO:0008652//cellular amino acid biosynthetic process;GO:0009695//jasmonic acid biosynthetic process;GO:0009416//response to light stimulus;GO:0009409//response to cold;GO:0055114//oxidation-reduction process;GO:0006733//oxidoreduction coenzyme metabolic process;GO:0031408//oxylipin biosynthetic process;GO:0009117//nucleotide metabolic process","GO:0035671//enone reductase activity;GO:0008270//zinc ion binding;GO:0000166//nucleotide binding;GO:0035798//2-alkenal reductase (NADP+) activity;GO:0003960//NADPH:quinone reductase activity","GO:0009941//chloroplast envelope;GO:0048046//apoplast;GO:0010319//stromule;GO:0009570//chloroplast stroma;GO:0009579//thylakoid"]
[265,"CSE_CL5210_Contig2","SW_CL8626_Contig1","-","-","+(Mostly)",900,{"v":0.99,"d":"99.00%"},9,4,5,{"v":0.476927,"d":"0.477"},{"v":0.219504,"d":"0.2195"},"gi|225425628|ref|XP_002268605.1|","PREDICTED: mitochondrial uncoupling protein 4 [Vitis vinifera]","gi|225425627|ref|XM_002268569.1|","PREDICTED: Vitis vinifera mitochondrial uncoupling protein 4-like (LOC100263686), mRNA","sp|Q9XI74|PUMP3_ARATH","Mitochondrial uncoupling protein 3 OS=Arabidopsis thaliana GN=PUMP3 PE=2 SV=1","-","-","K15112","vvi:100263686","solute carrier family 25 (mitochondrial uncoupling protein), member 27","GO:0055085//transmembrane transport;GO:0006839//mitochondrial transport","GO:0005215//transporter activity","GO:0005743//mitochondrial inner membrane;GO:0016021//integral to membrane"]
[266,"CSE_CL3766_Contig1","SW_CL2106_Contig2","-","-","+(Mostly)",900,{"v":0.924,"d":"92.40%"},5,1,4,{"v":1.51775,"d":"1.518"},{"v":0.798617,"d":"0.7986"},"gi|225425648|ref|XP_002272557.1|","PREDICTED: methyltransferase-like protein 7A [Vitis vinifera] >gi|296086353|emb|CBI31942.3| unnamed protein product [Vitis vinifera]","gi|359473306|ref|XM_002272521.2|","PREDICTED: Vitis vinifera methyltransferase-like protein 7A (LOC100256916), mRNA","-","-","COG0500","SAM-dependent methyltransferases","-","-","-","GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0009536//plastid"]
[267,"CSE_Unigene18478","SW_Unigene7403","-","-","+(Mostly)",1008,{"v":0.99,"d":"99.00%"},10,7,3,{"v":0.150806,"d":"0.151"},{"v":0.00473953,"d":"0.0047"},"gi|225425714|ref|XP_002275397.1|","PREDICTED: FAM203 family protein DDB_G0276861 [Vitis vinifera] >gi|296086382|emb|CBI31971.3| unnamed protein product [Vitis vinifera]","gi|359473448|ref|XM_002275361.2|","PREDICTED: Vitis vinifera FAM203 family protein DDB_G0276861-like (LOC100248279), mRNA","-","-","-","-","-","-","-","GO:0006626//protein targeting to mitochondrion","-","GO:0005634//nucleus"]
[268,"CSE_Unigene19650","SW_Unigene11752","-","-","+(Mostly)",1728,{"v":0.988,"d":"98.80%"},17,8,9,{"v":0.406721,"d":"0.407"},{"v":0.0876495,"d":"0.0876"},"gi|225425734|ref|XP_002271313.1|","PREDICTED: pentatricopeptide repeat-containing protein At1g26900, mitochondrial-like [Vitis vinifera]","gi|147820327|emb|AM430358.2|","Vitis vinifera contig VV78X164448.23, whole genome shotgun sequence","sp|Q9ZVG8|PPR60_ARATH","Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E54 PE=2 SV=1","-","-","K15271","rcu:RCOM_1095670","ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]","-","-","GO:0005739//mitochondrion"]
[269,"CSE_Unigene17018","SW_Unigene12721","-","-","+(Mostly)",807,{"v":0.99,"d":"99.00%"},8,2,6,{"v":1.06214,"d":"1.062"},{"v":0.912522,"d":"0.9125"},"gi|225424922|ref|XP_002277278.1|","PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera] >gi|296086421|emb|CBI32010.3| unnamed protein product [Vitis vinifera]","gi|225424921|ref|XM_002277242.1|","PREDICTED: Vitis vinifera uncharacterized LOC100253653 (LOC100253653), mRNA","sp|Q9LL85|WHY1_SOLTU","Single-stranded DNA-bindig protein WHY1, chloroplastic OS=Solanum tuberosum GN=WHY1 PE=1 SV=1","-","-","-","-","-","GO:0032211//negative regulation of telomere maintenance via telomerase;GO:0050832//defense response to fungus;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0006281//DNA repair","GO:0042162//telomeric DNA binding;GO:0003697//single-stranded DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0009508//plastid chromosome;GO:0009570//chloroplast stroma;GO:0005634//nucleus"]
[270,"CSE_Unigene14911","SW_Unigene15647","-","-","+(Mostly)",1404,{"v":0.992,"d":"99.20%"},11,6,5,{"v":0.223577,"d":"0.224"},{"v":0.0157213,"d":"0.0157"},"gi|225424865|ref|XP_002274190.1|","PREDICTED: tetratricopeptide repeat protein 38 [Vitis vinifera] >gi|296086448|emb|CBI32037.3| unnamed protein product [Vitis vinifera]","gi|225424864|ref|XM_002274154.1|","PREDICTED: Vitis vinifera tetratricopeptide repeat protein 38-like (LOC100262208), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[271,"CSE_Unigene15070","SW_CL5780_Contig1","-","-","+(Mostly)",873,{"v":0.994,"d":"99.40%"},5,4,1,{"v":0.0835083,"d":"0.084"},{"v":0.0149792,"d":"0.0150"},"gi|225424815|ref|XP_002267988.1|","PREDICTED: uncharacterized protein LOC100255235 [Vitis vinifera] >gi|296086476|emb|CBI32065.3| unnamed protein product [Vitis vinifera]","gi|359473312|ref|XM_002267952.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255235 (LOC100255235), mRNA","-","-","-","-","-","-","-","GO:0010190//cytochrome b6f complex assembly;GO:0010207//photosystem II assembly","-","GO:0009507//chloroplast"]
[272,"CSE_Unigene6325","SW_Unigene25605","-","-","+(Mostly)",606,{"v":0.983,"d":"98.30%"},10,2,8,{"v":1.22574,"d":"1.226"},{"v":0.932182,"d":"0.9322"},"gi|225424801|ref|XP_002271090.1|","PREDICTED: germin-like protein 3-1 [Vitis vinifera] >gi|296086484|emb|CBI32073.3| unnamed protein product [Vitis vinifera]","gi|225424800|ref|XM_002271054.1|","PREDICTED: Vitis vinifera germin-like protein 3-1 (LOC100246738), mRNA","sp|P92998|GL11_ARATH","Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2","-","-","-","-","-","-","GO:0016491//oxidoreductase activity;GO:0045735//nutrient reservoir activity;GO:0030145//manganese ion binding","GO:0048046//apoplast"]
[273,"CSE_Unigene6594","SW_Unigene11124","-","-","+(Mostly)",1152,{"v":0.988,"d":"98.80%"},14,3,11,{"v":1.65847,"d":"1.658"},{"v":0.562771,"d":"0.5628"},"gi|296086506|emb|CBI32095.3|","unnamed protein product [Vitis vinifera]","gi|359473411|ref|XM_002266563.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255243 (LOC100255243), mRNA","sp|Q9SSR1|Y1259_ARATH","DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=1 SV=1","COG3011","Uncharacterized protein conserved in bacteria","-","-","-","-","-","-"]
[274,"CSE_Unigene13397","SW_Unigene7073","-","-","+(Mostly)",459,{"v":0.985,"d":"98.50%"},7,2,5,{"v":0.553334,"d":"0.553"},{"v":0.374236,"d":"0.3742"},"gi|225424742|ref|XP_002267219.1|","PREDICTED: MLP-like protein 423 [Vitis vinifera] >gi|296086515|emb|CBI32104.3| unnamed protein product [Vitis vinifera]","gi|359473333|ref|XM_002267183.2|","PREDICTED: Vitis vinifera MLP-like protein 423 (LOC100243241), mRNA","sp|Q93VR4|ML423_ARATH","MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=1 SV=1","-","-","K14496","aly:ARALYDRAFT_903051","abscisic acid receptor PYR/PYL family","GO:0009607//response to biotic stimulus;GO:0006952//defense response","-","GO:0016020//membrane"]
[275,"CSE_CL634_Contig3","SW_Unigene2064","-","-","+(Mostly)",765,{"v":0.995,"d":"99.50%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|359474379|ref|XP_002265958.2|","PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis vinifera]","gi|349716079|emb|FQ392086.1|","Vitis vinifera clone SS0AFA7YI22","sp|Q8H1Q1|TL225_ARATH","Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1","COG1357","Uncharacterized low-complexity proteins","-","-","-","-","-","GO:0005576//extracellular region;GO:0009535//chloroplast thylakoid membrane;GO:0009543//chloroplast thylakoid lumen"]
[276,"CSE_Unigene17026","SW_CL6924_Contig1","-","-","+(Mostly)",1605,{"v":0.996,"d":"99.60%"},7,4,3,{"v":0.26341,"d":"0.263"},{"v":0.0804653,"d":"0.0805"},"gi|225426989|ref|XP_002270066.1|","PREDICTED: chaperone protein dnaJ 13 [Vitis vinifera] >gi|297741195|emb|CBI31926.3| unnamed protein product [Vitis vinifera]","gi|225426988|ref|XM_002270030.1|","PREDICTED: Vitis vinifera chaperone protein dnaJ 13-like (LOC100259128), mRNA","sp|Q39079|DNJ13_ARATH","Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1 SV=2","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K09531","vvi:100259128","DnaJ homolog subfamily C member 11","GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0055122//response to very low light intensity stimulus;GO:0010228//vegetative to reproductive phase transition of meristem","GO:0031072//heat shock protein binding","GO:0009507//chloroplast"]
[277,"CSE_Unigene13109","SW_Unigene11878","-","-","+(Mostly)",729,{"v":0.993,"d":"99.30%"},5,3,2,{"v":0.190867,"d":"0.191"},{"v":0.0770789,"d":"0.0771"},"gi|225426981|ref|XP_002269360.1|","PREDICTED: peroxisome biogenesis protein 19-1 [Vitis vinifera] >gi|297741197|emb|CBI31928.3| unnamed protein product [Vitis vinifera]","gi|225426980|ref|XM_002269324.1|","PREDICTED: Vitis vinifera peroxisome biogenesis protein 19-1-like (LOC100242021), mRNA","sp|Q94EI3|PE192_ARATH","Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1","-","-","K13337","vvi:100242021","peroxin-19","GO:0007031//peroxisome organization","GO:0042802//identical protein binding","GO:0005777//peroxisome;GO:0005829//cytosol;GO:0005634//nucleus"]
[278,"CSE_Unigene7137","SW_Unigene13626","-","-","+(Mostly)",1110,{"v":0.99,"d":"99.00%"},11,6,5,{"v":0.321651,"d":"0.322"},{"v":0.0576765,"d":"0.0577"},"gi|296082848|emb|CBI22149.3|","unnamed protein product [Vitis vinifera]","gi|349709719|emb|FQ395979.1|","Vitis vinifera clone SS0AFA12YM07","-","-","COG0354","Predicted aminomethyltransferase related to GcvT","K06980","rcu:RCOM_1680510",null,"GO:0006546//glycine catabolic process;GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0016226//iron-sulfur cluster assembly;GO:0032259//methylation","GO:0004047//aminomethyltransferase activity","GO:0005759//mitochondrial matrix"]
[279,"CSE_Unigene15123","SW_Unigene15648","-","-","+(Mostly)",1227,{"v":0.994,"d":"99.40%"},4,1,3,{"v":0.926547,"d":"0.927"},{"v":0.65688,"d":"0.6569"},"gi|225470319|ref|XP_002267811.1|","PREDICTED: maspardin [Vitis vinifera]","gi|359474318|ref|XM_002267775.2|","PREDICTED: Vitis vinifera maspardin-like (LOC100249980), mRNA","-","-","-","-","-","-","-","-","GO:0003824//catalytic activity","GO:0005737//cytoplasm"]
[280,"CSE_Unigene16296","SW_Unigene18539","-","-","+(Mostly)",2262,{"v":0.989,"d":"98.90%"},22,14,8,{"v":0.191039,"d":"0.191"},{"v":0.000160149,"d":"0.0002"},"gi|225427093|ref|XP_002276652.1|","PREDICTED: uncharacterized protein LOC100260823 [Vitis vinifera]","gi|359474527|ref|XM_002276616.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260823 (LOC100260823), mRNA","-","-","-","-","-","-","-","GO:0046777//protein autophosphorylation;GO:0009965//leaf morphogenesis;GO:0010155//regulation of proton transport;GO:0030154//cell differentiation","-","GO:0009570//chloroplast stroma;GO:0005634//nucleus"]
[281,"CSE_Unigene16443","SW_Unigene22414","-","-","+(Mostly)",1152,{"v":0.98,"d":"98.00%"},17,6,11,{"v":0.778627,"d":"0.779"},{"v":0.599386,"d":"0.5994"},"gi|225427112|ref|XP_002276479.1|","PREDICTED: probable plastid-lipid-associated protein 3, chloroplastic-like [Vitis vinifera]","gi|349705779|emb|FQ384318.1|","Vitis vinifera clone SS0AAG1YP12","sp|Q9ZP40|PG1_PEA","Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1","COG0455","ATPases involved in chromosome partitioning","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","-","-","GO:0009507//chloroplast"]
[282,"CSE_Unigene17797","SW_Unigene21912","-","-","+(Mostly)",2274,{"v":0.996,"d":"99.60%"},10,9,1,{"v":0.0439119,"d":"0.044"},{"v":8.68619e-05,"d":"0.0001"},"gi|225427163|ref|XP_002278896.1|","PREDICTED: uncharacterized membrane protein At4g09580 [Vitis vinifera]","gi|225427162|ref|XM_002278860.1|","PREDICTED: Vitis vinifera uncharacterized LOC100264293 (LOC100264293), mRNA","sp|Q8L586|Y4958_ARATH","Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1","COG0398","Uncharacterized conserved protein","-","-","-","GO:0006661//phosphatidylinositol biosynthetic process","-","-"]
[283,"CSE_Unigene16089","SW_Unigene5317","-","-","+(Mostly)",861,{"v":0.99,"d":"99.00%"},9,6,3,{"v":0.155652,"d":"0.156"},{"v":0.00786571,"d":"0.0079"},"gi|225427185|ref|XP_002279685.1|","PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis vinifera]","gi|359474553|ref|XM_002279649.2|","PREDICTED: Vitis vinifera 29 kDa ribonucleoprotein B, chloroplastic-like (LOC100243747), mRNA","sp|P19683|ROC4_NICSY","31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1","COG0724","RNA-binding proteins (RRM domain)","K11294","smo:SELMODRAFT_15428","nucleolin","GO:0009902//chloroplast relocation;GO:0006364//rRNA processing;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015995//chlorophyll biosynthetic process;GO:0010027//thylakoid membrane organization;GO:0042793//transcription from plastid promoter;GO:0015979//photosynthesis","GO:0003676//nucleic acid binding","GO:0009579//thylakoid;GO:0009570//chloroplast stroma"]
[284,"CSE_Unigene13918","SW_Unigene12096","-","-","+(Mostly)",882,{"v":0.989,"d":"98.90%"},7,2,5,{"v":0.71451,"d":"0.715"},{"v":0.485106,"d":"0.4851"},"gi|225427258|ref|XP_002281131.1|","PREDICTED: ferredoxin-1 [Vitis vinifera] >gi|297742123|emb|CBI33910.3| unnamed protein product [Vitis vinifera]","gi|359474571|ref|XM_002281095.2|","PREDICTED: Vitis vinifera ferredoxin-1-like (LOC100242061), mRNA","sp|P14936|FER1_RAPSA","Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1","COG0633","Ferredoxin","K02639","vvi:100242061","ferredoxin","GO:0022900//electron transport chain;GO:0010103//stomatal complex morphogenesis;GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009688//abscisic acid biosynthetic process","GO:0051537//2 iron, 2 sulfur cluster binding;GO:0046872//metal ion binding;GO:0009055//electron carrier activity","GO:0009507//chloroplast"]
[285,"CSE_Unigene17335","SW_Unigene24031","-","-","+(Mostly)",1335,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.150615,"d":"0.151"},{"v":0.0287811,"d":"0.0288"},"gi|225426184|ref|XP_002279382.1|","PREDICTED: BTB/POZ domain-containing protein At1g63850 [Vitis vinifera]","gi|359474085|ref|XM_002279346.2|","PREDICTED: Vitis vinifera BTB/POZ domain-containing protein At1g63850-like (LOC100257094), mRNA","sp|Q9CAJ9|Y1385_ARATH","BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana GN=At1g63850 PE=1 SV=1","-","-","-","-","-","-","-","GO:0005634//nucleus;GO:0009536//plastid"]
[286,"CSE_Unigene856","SW_Unigene8325","-","-","+(Mostly)",699,{"v":0.99,"d":"99.00%"},7,2,5,{"v":0.908096,"d":"0.908"},{"v":0.887101,"d":"0.8871"},"gi|225426150|ref|XP_002278406.1|","PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Vitis vinifera]","gi|225426149|ref|XM_002278370.1|","PREDICTED: Vitis vinifera 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like (LOC100250076), mRNA","sp|Q9M4W3|ISPF_CATRO","2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus GN=ISPF PE=2 SV=1","COG0245","2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase","K01770","vvi:100250076","2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]","GO:0016117//carotenoid biosynthetic process;GO:0015995//chlorophyll biosynthetic process","GO:0008685//2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity","GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[287,"CSE_Unigene8966","SW_Unigene6845","-","-","+(Mostly)",1125,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.0930419,"d":"0.093"},{"v":0.03286,"d":"0.0329"},"gi|225426344|ref|XP_002270160.1|","PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Vitis vinifera] >gi|297742333|emb|CBI34482.3| unnamed protein product [Vitis vinifera]","gi|123696915|emb|AM438564.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X254218.24, clone ENTAV 115","-","-","-","-","K11979","vvi:100242771","E3 ubiquitin-protein ligase UBR7 [EC:6.3.2.19]","GO:0006261//DNA-dependent DNA replication;GO:0016567//protein ubiquitination","GO:0004842//ubiquitin-protein ligase activity;GO:0008270//zinc ion binding","GO:0005737//cytoplasm"]
[288,"CSE_Unigene535","SW_Unigene22675","-","-","+(Mostly)",708,{"v":0.99,"d":"99.00%"},7,{"v":1.31206,"d":"1"},{"v":5.68794,"d":"6"},{"v":1.46365,"d":"1.464"},{"v":0.870189,"d":"0.8702"},"gi|147767601|emb|CAN73381.1|","hypothetical protein VITISV_003162 [Vitis vinifera]","gi|147767600|emb|AM426014.2|","Vitis vinifera contig VV78X138335.4, whole genome shotgun sequence","-","-","-","-","-","-","-","GO:0046777//protein autophosphorylation;GO:0009637//response to blue light;GO:0010155//regulation of proton transport;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport","-","GO:0009535//chloroplast thylakoid membrane"]
[289,"CSE_Unigene15952","SW_Unigene22769","-","-","+(Mostly)",3573,{"v":0.994,"d":"99.40%"},21,{"v":10.8191,"d":"11"},{"v":10.1809,"d":"10"},{"v":0.229356,"d":"0.229"},{"v":0.000824892,"d":"0.0008"},"gi|225426296|ref|XP_002265315.1|","PREDICTED: uncharacterized protein LOC100254675 [Vitis vinifera]","gi|225426295|ref|XM_002265279.1|","PREDICTED: Vitis vinifera uncharacterized LOC100254675 (LOC100254675), mRNA","sp|Q8L7I1|Y4193_ARATH","Uncharacterized protein At4g10930 OS=Arabidopsis thaliana GN=At4g10930 PE=2 SV=1","-","-","-","-","-","GO:0045491//xylan metabolic process","-","-"]
[290,"CSE_Unigene16872","SW_Unigene22269","-","-","+(Mostly)",627,{"v":0.981,"d":"98.10%"},12,9,3,{"v":0.144589,"d":"0.145"},{"v":0.000242608,"d":"0.0002"},"gi|225426226|ref|XP_002263179.1|","PREDICTED: ABC transporter F family member 3 [Vitis vinifera] >gi|297742399|emb|CBI34548.3| unnamed protein product [Vitis vinifera]","gi|359474125|ref|XM_002263143.2|","PREDICTED: Vitis vinifera ABC transporter F family member 3-like (LOC100256523), mRNA","sp|Q8H0V6|AB3F_ARATH","ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1","COG0488","ATPase components of ABC transporters with duplicated ATPase domains","K06158","vvi:100256523","ATP-binding cassette, subfamily F, member 3","GO:0007010//cytoskeleton organization;GO:0006094//gluconeogenesis;GO:0006406//mRNA export from nucleus;GO:0009651//response to salt stress;GO:0010498//proteasomal protein catabolic process;GO:0042742//defense response to bacterium;GO:0006096//glycolysis;GO:0046686//response to cadmium ion;GO:0006200//ATP catabolic process;GO:0006606//protein import into nucleus","GO:0005215//transporter activity;GO:0016887//ATPase activity;GO:0005524//ATP binding","GO:0005829//cytosol"]
[291,"CSE_Unigene18008","SW_Unigene10281","-","-","+(Mostly)",1410,{"v":0.999,"d":"99.90%"},2,1,1,{"v":0.380218,"d":"0.380"},{"v":0.399637,"d":"0.3996"},"gi|225426842|ref|XP_002276721.1|","PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein [Vitis vinifera] >gi|297742569|emb|CBI34718.3| unnamed protein product [Vitis vinifera]","gi|359474232|ref|XM_002276685.2|","PREDICTED: Vitis vinifera phosphatidylinositol glycan anchor biosynthesis class U protein-like (LOC100261568), mRNA","-","-","-","-","K05293","vvi:100261568","phosphatidylinositol glycan, class U","GO:0006506//GPI anchor biosynthetic process;GO:0042732//D-xylose metabolic process;GO:0051301//cell division","-","GO:0005739//mitochondrion;GO:0016021//integral to membrane;GO:0005789//endoplasmic reticulum membrane;GO:0005886//plasma membrane"]
[292,"CSE_Unigene13543","SW_Unigene14377","-","-","+(Mostly)",873,{"v":0.983,"d":"98.30%"},12,6,6,{"v":0.354387,"d":"0.354"},{"v":0.0686955,"d":"0.0687"},"gi|225470285|ref|XP_002266380.1|","PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Vitis vinifera] >gi|147794105|emb|CAN62361.1| hypothetical protein VITISV_031921 [Vitis vinifera] >gi|297742668|emb|CBI34817.3| unnamed protein product [Vitis vinifera]","gi|359474288|ref|XM_002266344.2|","PREDICTED: Vitis vinifera ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like (LOC100256891), mRNA","sp|Q9XJ36|CLPR2_ARATH","ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1","COG0740","Protease subunit of ATP-dependent Clp proteases","K01358","vvi:100256891","ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]","GO:0035304//regulation of protein dephosphorylation;GO:0010207//photosystem II assembly;GO:0009902//chloroplast relocation;GO:0006508//proteolysis;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0004252//serine-type endopeptidase activity","GO:0009941//chloroplast envelope;GO:0009840//chloroplastic endopeptidase Clp complex;GO:0009534//chloroplast thylakoid;GO:0010287//plastoglobule"]
[293,"CSE_Unigene1843","SW_Unigene16799","-","-","+(Mostly)",2394,{"v":0.991,"d":"99.10%"},22,16,6,{"v":0.142221,"d":"0.142"},{"v":1.47113e-05,"d":"0.0000"},"gi|225427387|ref|XP_002262674.1|","PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic [Vitis vinifera] >gi|296088380|emb|CBI37371.3| unnamed protein product [Vitis vinifera]","gi|225427386|ref|XM_002262638.1|","PREDICTED: Vitis vinifera protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic-like (LOC100251728), mRNA","sp|Q9FIG9|ARC6_ARATH","Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic OS=Arabidopsis thaliana GN=ARC6 PE=1 SV=1","-","-","-","-","-","GO:0006457//protein folding;GO:0010020//chloroplast fission;GO:0010207//photosystem II assembly","GO:0043621//protein self-association","GO:0031357//integral to chloroplast inner membrane"]
[294,"CSE_Unigene16694","SW_Unigene18158","-","-","+(Mostly)",942,{"v":0.988,"d":"98.80%"},11,7,4,{"v":0.216197,"d":"0.216"},{"v":0.0134859,"d":"0.0135"},"gi|225427488|ref|XP_002263208.1|","PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera] >gi|296088479|emb|CBI37470.3| unnamed protein product [Vitis vinifera]","gi|225427487|ref|XM_002263172.1|","PREDICTED: Vitis vinifera TIM21-like protein, mitochondrial (LOC100259727), mRNA","sp|Q1G3L1|TIM21_ARATH","Probable mitochondrial import inner membrane translocase subunit TIM21 OS=Arabidopsis thaliana GN=TIM21 PE=1 SV=1","-","-","-","-","-","GO:0030150//protein import into mitochondrial matrix;GO:0090351//seedling development","-","GO:0005744//mitochondrial inner membrane presequence translocase complex;GO:0016023//cytoplasmic membrane-bounded vesicle"]
[295,"CSE_Unigene11060","SW_Unigene1865","-","-","+(Mostly)",1167,{"v":0.997,"d":"99.70%"},4,3,1,{"v":0.102655,"d":"0.103"},{"v":0.0403161,"d":"0.0403"},"gi|296085488|emb|CBI29220.3|","unnamed protein product [Vitis vinifera]","gi|359474765|ref|XM_002270815.2|","PREDICTED: Vitis vinifera carbon catabolite repressor protein 4 homolog 4-like (LOC100256249), mRNA","sp|A8MS41|CCR4D_ARATH","Carbon catabolite repressor protein 4 homolog 4 OS=Arabidopsis thaliana GN=CCR4-4 PE=2 SV=1","COG5239","mRNA deadenylase, exonuclease subunit and related nucleases","K12603","smo:SELMODRAFT_418021","CCR4-NOT transcription complex subunit 6","-","GO:0004535//poly(A)-specific ribonuclease activity","GO:0005739//mitochondrion;GO:0005634//nucleus;GO:0009507//chloroplast"]
[296,"CSE_Unigene4335","SW_Unigene24581","-","-","+(Mostly)",1137,{"v":0.992,"d":"99.20%"},9,6,3,{"v":0.167283,"d":"0.167"},{"v":0.0103857,"d":"0.0104"},"gi|296085497|emb|CBI29229.3|","unnamed protein product [Vitis vinifera]","gi|147772212|emb|AM426975.2|","Vitis vinifera contig VV78X256440.3, whole genome shotgun sequence","-","-","-","-","-","-","-","-","-","GO:0005739//mitochondrion"]
[297,"CSE_Unigene7170","SW_Unigene6891","-","-","+(Mostly)",1602,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.194984,"d":"0.195"},{"v":0.0560993,"d":"0.0561"},"gi|225427562|ref|XP_002266662.1|","PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera] >gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]","gi|225427561|ref|XM_002266626.1|","PREDICTED: Vitis vinifera uncharacterized LOC100242504 (LOC100242504), mRNA","-","-","COG0687","Spermidine/putrescine-binding periplasmic protein","-","-","-","GO:0015846//polyamine transport","GO:0046872//metal ion binding;GO:0019808//polyamine binding","GO:0009941//chloroplast envelope;GO:0005634//nucleus;GO:0042597//periplasmic space"]
[298,"CSE_Unigene15268","SW_Unigene18515","-","-","+(Mostly)",1713,{"v":0.992,"d":"99.20%"},14,7,7,{"v":0.432936,"d":"0.433"},{"v":0.135685,"d":"0.1357"},"gi|296090451|emb|CBI40270.3|","unnamed protein product [Vitis vinifera]","gi|359475432|ref|XM_002285312.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265867 (LOC100265867), mRNA","-","-","COG1055","Na+/H+ antiporter NhaD and related arsenite permeases","-","-","-","GO:0035725//sodium ion transmembrane transport;GO:0006848//pyruvate transport;GO:0015746//citrate transport","GO:0015385//sodium:hydrogen antiporter activity;GO:0050833//pyruvate transmembrane transporter activity;GO:0015137//citrate transmembrane transporter activity;GO:0015386//potassium:hydrogen antiporter activity","GO:0016021//integral to membrane;GO:0009507//chloroplast"]
[299,"CSE_Unigene659","SW_Unigene17176","-","-","+(Mostly)",639,{"v":0.98,"d":"98.00%"},13,6,7,{"v":0.407028,"d":"0.407"},{"v":0.094581,"d":"0.0946"},"gi|296087485|emb|CBI34074.3|","unnamed protein product [Vitis vinifera]","gi|225462859|ref|XM_002270135.1|","PREDICTED: Vitis vinifera 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like (LOC100256517), mRNA","sp|Q0WUA3|MENA_ARATH","1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ABC4 PE=1 SV=2","COG1575","1,4-dihydroxy-2-naphthoate octaprenyltransferase","K02548","vvi:100256517","1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]","GO:0016556//mRNA modification;GO:0010103//stomatal complex morphogenesis;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009772//photosynthetic electron transport in photosystem II;GO:0010236//plastoquinone biosynthetic process;GO:0010207//photosystem II assembly;GO:0042372//phylloquinone biosynthetic process","GO:0046428//1,4-dihydroxy-2-naphthoate octaprenyltransferase activity","GO:0016021//integral to membrane;GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[300,"CSE_CL6870_Contig2","SW_Unigene20328","-","-","+(Mostly)",1158,{"v":0.99,"d":"99.00%"},12,11,1,{"v":0.0339379,"d":"0.034"},{"v":5.73651e-06,"d":"0.0000"},"gi|225428049|ref|XP_002279281.1|","PREDICTED: glycerate dehydrogenase [Vitis vinifera] >gi|297744600|emb|CBI37862.3| unnamed protein product [Vitis vinifera]","gi|359475020|ref|XM_002279245.2|","PREDICTED: Vitis vinifera glycerate dehydrogenase-like (LOC100262344), mRNA","sp|Q9C9W5|HPR1_ARATH","Glycerate dehydrogenase HPR, peroxisomal OS=Arabidopsis thaliana GN=HPR PE=1 SV=1","COG1052","Lactate dehydrogenase and related dehydrogenases","K15893","vvi:100262344","hydroxypyruvate reductase 1","GO:0010218//response to far red light;GO:0035304//regulation of protein dephosphorylation;GO:0010114//response to red light;GO:0010207//photosystem II assembly;GO:0042631//cellular response to water deprivation;GO:0009854//oxidative photosynthetic carbon pathway;GO:0009773//photosynthetic electron transport in photosystem I;GO:0071482//cellular response to light stimulus;GO:0010304//PSII associated light-harvesting complex II catabolic process;GO:0009637//response to blue light;GO:0019344//cysteine biosynthetic process;GO:0009657//plastid organization;GO:0006364//rRNA processing","GO:0051287//NAD binding;GO:0008465//glycerate dehydrogenase activity;GO:0008266//poly(U) RNA binding","GO:0048046//apoplast;GO:0009507//chloroplast;GO:0005777//peroxisome"]
[301,"CSE_Unigene17133","SW_Unigene4730","-","-","+(Mostly)",927,{"v":0.99,"d":"99.00%"},9,5,4,{"v":0.2702,"d":"0.270"},{"v":0.0516198,"d":"0.0516"},"gi|225427786|ref|XP_002269232.1|","PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Vitis vinifera] >gi|297744718|emb|CBI37980.3| unnamed protein product [Vitis vinifera]","gi|359475080|ref|XM_002269196.2|","PREDICTED: Vitis vinifera NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like (LOC100243586), mRNA","sp|P28475|S6PD_MALDO","NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1","COG0656","Aldo/keto reductases, related to diketogulonate reductase","K00085","ath:AT2G21260","aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200]","GO:0046686//response to cadmium ion;GO:0055114//oxidation-reduction process","GO:0047641","GO:0005829//cytosol"]
[302,"CSE_Unigene19706","SW_Unigene12747","-","-","+(Mostly)",867,{"v":0.99,"d":"99.00%"},9,4,5,{"v":0.581915,"d":"0.582"},{"v":0.445274,"d":"0.4453"},"gi|297741277|emb|CBI32408.3|","unnamed protein product [Vitis vinifera]","gi|147814942|emb|AM463790.2|","Vitis vinifera contig VV78X094448.8, whole genome shotgun sequence","sp|Q9LJK3|LAG12_ARATH","LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1","COG5058","Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor","K04710","pop:POPTR_767571","ceramide synthetase [EC:2.3.1.24]","GO:0046520//sphingoid biosynthetic process;GO:0042759//long-chain fatty acid biosynthetic process;GO:0002238//response to molecule of fungal origin;GO:0016126//sterol biosynthetic process","GO:0050291//sphingosine N-acyltransferase activity","GO:0016021//integral to membrane;GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane"]
[303,"CSE_Unigene17328","SW_CL7605_Contig1","-","-","+(Mostly)",1194,{"v":0.991,"d":"99.10%"},11,5,6,{"v":0.382351,"d":"0.382"},{"v":0.103409,"d":"0.1034"},"gi|225428691|ref|XP_002284953.1|","PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic [Vitis vinifera] >gi|297741338|emb|CBI32469.3| unnamed protein product [Vitis vinifera]","gi|359475224|ref|XM_002284917.2|","PREDICTED: Vitis vinifera probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-like (LOC100255475), mRNA","sp|Q93Z70|ARGC_ARATH","Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=At2g19940 PE=1 SV=2","COG0002","Acetylglutamate semialdehyde dehydrogenase","K00145","vvi:100255475","N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]","GO:0055114//oxidation-reduction process;GO:0006526//arginine biosynthetic process;GO:0048481//ovule development;GO:0046686//response to cadmium ion","GO:0051287//NAD binding;GO:0005507//copper ion binding;GO:0003942//N-acetyl-gamma-glutamyl-phosphate reductase activity;GO:0046983//protein dimerization activity","GO:0005730//nucleolus;GO:0009570//chloroplast stroma;GO:0016020//membrane"]
[304,"CSE_CL1517_Contig1","SW_CL2896_Contig2","-","-","+(Mostly)",846,{"v":0.988,"d":"98.80%"},10,6,4,{"v":0.183942,"d":"0.184"},{"v":0.0100666,"d":"0.0101"},"gi|147820884|emb|CAN60895.1|","hypothetical protein VITISV_023239 [Vitis vinifera]","gi|349718067|emb|FQ387266.1|","Vitis vinifera clone SS0AEB27YC11","-","-","-","-","K11876","vvi:100243552","proteasome assembly chaperone 2","GO:0006635//fatty acid beta-oxidation","-","GO:0000502//proteasome complex;GO:0005634//nucleus;GO:0009536//plastid"]
[305,"CSE_CL6934_Contig1","SW_CL2818_Contig1","-","-","+(Mostly)",957,{"v":0.984,"d":"98.40%"},15,12,3,{"v":0.0772071,"d":"0.077"},{"v":7.40034e-06,"d":"0.0000"},"gi|146432259|gb|ABQ41113.1|","L-galactose dehydrogenase [Vitis vinifera]","gi|349722906|emb|FQ393241.1|","Vitis vinifera clone SS0AFA2YA07","sp|O81884|GALDH_ARATH","L-galactose dehydrogenase OS=Arabidopsis thaliana GN=LGALDH PE=1 SV=1","COG0667","Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)","K00064","vvi:100263479","D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]","GO:0019853//L-ascorbic acid biosynthetic process;GO:0055114//oxidation-reduction process","GO:0010349//L-galactose dehydrogenase activity;GO:0050235//pyridoxal 4-dehydrogenase activity","-"]
[306,"CSE_Unigene17387","SW_Unigene18526","-","-","+(Mostly)",1623,{"v":0.979,"d":"97.90%"},23,9,14,{"v":0.645158,"d":"0.645"},{"v":0.355701,"d":"0.3557"},"gi|225429193|ref|XP_002276156.1|","PREDICTED: F-box protein SKIP22 [Vitis vinifera] >gi|147804806|emb|CAN73524.1| hypothetical protein VITISV_010705 [Vitis vinifera]","gi|225429192|ref|XM_002276120.1|","PREDICTED: Vitis vinifera F-box protein SKIP22-like (LOC100246319), mRNA","sp|Q9ZUB8|SKI22_ARATH","F-box protein SKIP22 OS=Arabidopsis thaliana GN=SKIP22 PE=1 SV=1","-","-","K10293","vvi:100246319","F-box protein 7","-","-","-"]
[307,"CSE_Unigene13039","SW_Unigene22743","-","-","+(Mostly)",639,{"v":0.992,"d":"99.20%"},5,4,1,{"v":0.0879585,"d":"0.088"},{"v":0.0172999,"d":"0.0173"},"gi|225429325|ref|XP_002271696.1|","PREDICTED: thioredoxin domain-containing protein 9 homolog [Vitis vinifera] >gi|296083094|emb|CBI22498.3| unnamed protein product [Vitis vinifera]","gi|225429324|ref|XM_002271660.1|","PREDICTED: Vitis vinifera thioredoxin domain-containing protein 9 homolog-like (LOC100262780), mRNA","sp|O64628|TXND9_ARATH","Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana GN=At2g18990 PE=2 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","K03671","mtr:MTR_7g009070","thioredoxin 1","GO:0045454//cell redox homeostasis;GO:0019932//second-messenger-mediated signaling","-","GO:0005737//cytoplasm"]
[308,"CSE_Unigene11973","SW_Unigene21915","-","-","+(Mostly)",858,{"v":0.994,"d":"99.40%"},5,4,1,{"v":0.0782045,"d":"0.078"},{"v":0.012478,"d":"0.0125"},"gi|359475460|ref|XP_002270710.2|","PREDICTED: TIP41-like protein-like [Vitis vinifera] >gi|296083102|emb|CBI22506.3| unnamed protein product [Vitis vinifera]","gi|359475459|ref|XM_002270674.2|","PREDICTED: Vitis vinifera TIP41-like protein-like (LOC100255906), mRNA","-","-","-","-","-","-","-","-","-","GO:0005829//cytosol"]
[309,"CSE_Unigene10042","SW_CL5446_Contig1","-","-","+(Mostly)",1290,{"v":0.997,"d":"99.70%"},4,3,1,{"v":0.114899,"d":"0.115"},{"v":0.0504926,"d":"0.0505"},"gi|225429226|ref|XP_002263383.1|","PREDICTED: uncharacterized protein LOC100256074 [Vitis vinifera] >gi|296088080|emb|CBI35439.3| unnamed protein product [Vitis vinifera]","gi|359475581|ref|XM_002263347.2|","PREDICTED: Vitis vinifera uncharacterized LOC100256074 (LOC100256074), mRNA","-","-","COG0598","Mg2+ and Co2+ transporters","-","-","-","GO:0055085//transmembrane transport;GO:0031348//negative regulation of defense response;GO:0045087//innate immune response;GO:0006944//cellular membrane fusion;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009863//salicylic acid mediated signaling pathway;GO:0030001//metal ion transport;GO:0009697//salicylic acid biosynthetic process","GO:0046873//metal ion transmembrane transporter activity","GO:0005622//intracellular;GO:0005886//plasma membrane"]
[310,"CSE_Unigene16565","SW_CL5155_Contig2","-","-","+(Mostly)",2391,{"v":0.992,"d":"99.20%"},19,12,7,{"v":0.222914,"d":"0.223"},{"v":0.00136029,"d":"0.0014"},"gi|359476904|ref|XP_002263406.2|","PREDICTED: protein GRIP [Vitis vinifera]","gi|359476903|ref|XM_002263370.2|","PREDICTED: Vitis vinifera protein GRIP-like (LOC100266353), mRNA","sp|Q8S2T0|GRIP_ARATH","Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 SV=2","COG0419","ATPase involved in DNA repair","K09291","smo:SELMODRAFT_444132","nucleoprotein TPR","GO:0000278//mitotic cell cycle;GO:0006396//RNA processing;GO:0000042//protein targeting to Golgi;GO:0030244//cellulose biosynthetic process;GO:0009630//gravitropism","GO:0005515//protein binding","GO:0005802//trans-Golgi network;GO:0005794//Golgi apparatus"]
[311,"CSE_Unigene18070","SW_Unigene6698","-","-","+(Mostly)",1362,{"v":0.994,"d":"99.40%"},8,4,4,{"v":0.33899,"d":"0.339"},{"v":0.11905,"d":"0.1191"},"gi|225431071|ref|XP_002263236.1|","PREDICTED: 3-dehydroquinate synthase [Vitis vinifera] >gi|297734973|emb|CBI17335.3| unnamed protein product [Vitis vinifera]","gi|225431070|ref|XM_002263200.1|","PREDICTED: Vitis vinifera 3-dehydroquinate synthase-like (LOC100266137), mRNA","-","-","COG0337","3-dehydroquinate synthetase","K01735","vvi:100266137","3-dehydroquinate synthase [EC:4.2.3.4]","GO:0009073//aromatic amino acid family biosynthetic process","GO:0003856//3-dehydroquinate synthase activity","GO:0009507//chloroplast"]
[312,"CSE_Unigene19243","SW_Unigene22752","-","-","+(Mostly)",1878,{"v":0.993,"d":"99.30%"},13,6,7,{"v":0.436699,"d":"0.437"},{"v":0.191303,"d":"0.1913"},"gi|225431257|ref|XP_002274814.1|","PREDICTED: CDK5RAP1-like protein-like [Vitis vinifera]","gi|225431256|ref|XM_002274778.1|","PREDICTED: Vitis vinifera CDK5RAP1-like protein-like (LOC100266017), mRNA","sp|Q8H0V1|CK5P1_ARATH","CDK5RAP1-like protein OS=Arabidopsis thaliana GN=At4g36390 PE=2 SV=1","COG0621","2-methylthioadenine synthetase","K14441","cme:CMQ410C","ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]","GO:0010155//regulation of proton transport;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0007131//reciprocal meiotic recombination;GO:0009793//embryo development ending in seed dormancy;GO:0006400//tRNA modification;GO:0009691//cytokinin biosynthetic process;GO:0016226//iron-sulfur cluster assembly;GO:0046777//protein autophosphorylation;GO:0055114//oxidation-reduction process;GO:0009073//aromatic amino acid family biosynthetic process","GO:0051539//4 iron, 4 sulfur cluster binding;GO:0016740//transferase activity;GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0046872//metal ion binding","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[313,"CSE_Unigene13329","SW_Unigene15585","-","-","+(Mostly)",648,{"v":0.998,"d":"99.80%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|359476682|ref|XP_002264695.2|","PREDICTED: soluble inorganic pyrophosphatase-like [Vitis vinifera] >gi|297735129|emb|CBI17491.3| unnamed protein product [Vitis vinifera]","gi|359476681|ref|XM_002264659.2|","PREDICTED: Vitis vinifera soluble inorganic pyrophosphatase-like (LOC100254798), mRNA","sp|Q0DYB1|IPYR_ORYSJ","Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1","COG0221","Inorganic pyrophosphatase","K01507","vvi:100254798","inorganic pyrophosphatase [EC:3.6.1.1]","GO:0046686//response to cadmium ion;GO:0006796//phosphate-containing compound metabolic process","GO:0004427//inorganic diphosphatase activity;GO:0000287//magnesium ion binding","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[314,"CSE_Unigene9646","SW_CL3893_Contig1","-","-","+(Mostly)",1251,{"v":0.995,"d":"99.50%"},6,1,5,{"v":1.82625,"d":"1.826"},{"v":0.845484,"d":"0.8455"},"gi|225430718|ref|XP_002266392.1|","PREDICTED: transmembrane protein 53-like [Vitis vinifera]","gi|225430717|ref|XM_002266356.1|","PREDICTED: Vitis vinifera transmembrane protein 53-like (LOC100256387), mRNA","-","-","-","-","-","-","-","-","-","GO:0043231//intracellular membrane-bounded organelle;GO:0044444//cytoplasmic part"]
[315,"CSE_CL4320_Contig1","SW_Unigene11003","-","-","+(Mostly)",555,{"v":0.995,"d":"99.50%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225430752|ref|XP_002267002.1|","PREDICTED: probable ADP-ribosylation factor At2g18390 [Vitis vinifera] >gi|147792210|emb|CAN72979.1| hypothetical protein VITISV_009030 [Vitis vinifera] >gi|297735152|emb|CBI17514.3| unnamed protein product [Vitis vinifera]","gi|225430751|ref|XM_002266966.1|","PREDICTED: Vitis vinifera probable ADP-ribosylation factor At2g18390-like (LOC100252991), mRNA","sp|Q9ZPX1|ARF5_ARATH","Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1","COG1100","GTPase SAR1 and related small G proteins","K07943","vvi:100252991","ADP-ribosylation factor-like 2","GO:0007264//small GTPase mediated signal transduction;GO:0009960//endosperm development;GO:0000226//microtubule cytoskeleton organization;GO:0007021//tubulin complex assembly;GO:0009630//gravitropism;GO:0009558//embryo sac cellularization;GO:0006886//intracellular protein transport;GO:0009793//embryo development ending in seed dormancy","GO:0003924//GTPase activity;GO:0005525//GTP binding","GO:0005794//Golgi apparatus"]
[316,"CSE_Unigene14197","SW_Unigene19730","-","-","+(Mostly)",462,{"v":0.996,"d":"99.60%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225430768|ref|XP_002267591.1|","PREDICTED: MIP18 family protein At1g68310-like [Vitis vinifera]","gi|349708860|emb|FQ395720.1|","Vitis vinifera clone SS0AFA14YH01","sp|Q9C9G6|U195A_ARATH","MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310 PE=2 SV=2","COG5133","Uncharacterized conserved protein","-","-","-","-","-","GO:0005634//nucleus"]
[317,"CSE_Unigene11734","SW_Unigene11645","-","-","+(Mostly)",1446,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225430778|ref|XP_002267187.1|","PREDICTED: cytochrome P450 90B1-like [Vitis vinifera]","gi|359476573|ref|XM_002267151.2|","PREDICTED: Vitis vinifera cytochrome P450 90B1-like (LOC100241065), mRNA","sp|O64989|C90B1_ARATH","Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=2","COG2124","Cytochrome P450","K09587","vvi:100241065","cytochrome P450, family 90, subfamily B, polypeptide 1 (steroid 22-alpha-hydroxylase) [EC:1.14.13.-]","GO:0016132//brassinosteroid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0009867//jasmonic acid mediated signaling pathway;GO:0010358//leaf shaping;GO:0009741//response to brassinosteroid stimulus;GO:0009826//unidimensional cell growth;GO:0016126//sterol biosynthetic process","GO:0010012//steroid 22-alpha hydroxylase activity;GO:0009055//electron carrier activity;GO:0020037//heme binding;GO:0050597;GO:0005506//iron ion binding","GO:0005783//endoplasmic reticulum"]
[318,"CSE_Unigene14059","SW_Unigene16868","-","-","+(Mostly)",1296,{"v":0.992,"d":"99.20%"},10,6,4,{"v":0.217812,"d":"0.218"},{"v":0.0188457,"d":"0.0188"},"gi|359476598|ref|XP_002269879.2|","PREDICTED: phospholipase A(1) LCAT3-like [Vitis vinifera] >gi|297735233|emb|CBI17595.3| unnamed protein product [Vitis vinifera]","gi|359476597|ref|XM_002269843.2|","PREDICTED: Vitis vinifera phospholipase A(1) LCAT3-like (LOC100263328), mRNA","sp|Q93V61|LCAT3_ARATH","Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana GN=LCAT3 PE=1 SV=1","-","-","K06129","bdi:100841379","lysophospholipase III [EC:3.1.1.5]","GO:0006629//lipid metabolic process","GO:0004607//phosphatidylcholine-sterol O-acyltransferase activity","GO:0005576//extracellular region"]
[319,"CSE_Unigene966","SW_Unigene19346","-","-","+(Mostly)",1347,{"v":0.984,"d":"98.40%"},10,8,2,{"v":0.0842053,"d":"0.084"},{"v":0.000460866,"d":"0.0005"},"gi|225430898|ref|XP_002276037.1|","PREDICTED: peptide chain release factor 2 [Vitis vinifera]","gi|359476742|ref|XM_002276001.2|","PREDICTED: Vitis vinifera peptide chain release factor 2-like (LOC100265078), mRNA","-","-","COG1186","Protein chain release factor B","K02836","vvi:100265078","peptide chain release factor 2","GO:0006415//translational termination;GO:0035304//regulation of protein dephosphorylation;GO:0010207//photosystem II assembly;GO:0009902//chloroplast relocation;GO:0009965//leaf morphogenesis;GO:0030154//cell differentiation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0016149//translation release factor activity, codon specific","GO:0009570//chloroplast stroma"]
[320,"CSE_Unigene18498","SW_Unigene14968","-","-","+(Mostly)",1293,{"v":0.995,"d":"99.50%"},7,3,4,{"v":0.574597,"d":"0.575"},{"v":0.127355,"d":"0.1274"},"gi|225431005|ref|XP_002279210.1|","PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera] >gi|297735292|emb|CBI17654.3| unnamed protein product [Vitis vinifera]","gi|359476788|ref|XM_002279174.2|","PREDICTED: Vitis vinifera CBS domain-containing protein CBSX6-like (LOC100266840), mRNA","sp|Q8GZA4|CBSX6_ARATH","CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana GN=CBSX6 PE=1 SV=1","-","-","-","-","-","-","-","GO:0005773//vacuole"]
[321,"CSE_Unigene18700","SW_Unigene17542","-","-","+(Mostly)",1914,{"v":0.996,"d":"99.60%"},8,4,4,{"v":0.355466,"d":"0.355"},{"v":0.132269,"d":"0.1323"},"gi|359476796|ref|XP_002279984.2|","PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic-like [Vitis vinifera] >gi|297735311|emb|CBI17673.3| unnamed protein product [Vitis vinifera]","gi|359476795|ref|XM_002279948.2|","PREDICTED: Vitis vinifera protein LUTEIN DEFICIENT 5, chloroplastic-like (LOC100240996), mRNA","sp|Q93VK5|LUT5_ARATH","Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana GN=CYP97A3 PE=1 SV=1","COG2124","Cytochrome P450","K15747","vvi:100240996","cytochrome P450, family 97, subfamily A (beta-ring hydroxylase) [EC:1.14.-.-]","GO:0006655//phosphatidylglycerol biosynthetic process;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0043085//positive regulation of catalytic activity;GO:0019252//starch biosynthetic process;GO:0016123//xanthophyll biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0000023//maltose metabolic process;GO:0015995//chlorophyll biosynthetic process;GO:0055114//oxidation-reduction process","GO:0010291//carotene beta-ring hydroxylase activity;GO:0070330//aromatase activity;GO:0020037//heme binding;GO:0009055//electron carrier activity;GO:0019825//oxygen binding;GO:0005506//iron ion binding","GO:0009941//chloroplast envelope"]
[322,"CSE_Unigene1449","SW_Unigene18093","-","-","+(Mostly)",375,{"v":0.984,"d":"98.40%"},6,5,1,{"v":0.0806917,"d":"0.081"},{"v":0.00898088,"d":"0.0090"},"gi|225462409|ref|XP_002267152.1|","PREDICTED: violaxanthin de-epoxidase, chloroplastic [Vitis vinifera]","gi|225462408|ref|XM_002267116.1|","PREDICTED: Vitis vinifera violaxanthin de-epoxidase, chloroplastic-like (LOC100257865), mRNA","sp|Q40593|VDE_TOBAC","Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum GN=VDE1 PE=2 SV=1","-","-","K09839","vvi:100257865","violaxanthin de-epoxidase [EC:1.10.99.3]","GO:0010028//xanthophyll cycle;GO:0006631//fatty acid metabolic process;GO:0015994//chlorophyll metabolic process;GO:0009408//response to heat;GO:0055114//oxidation-reduction process","GO:0046422//violaxanthin de-epoxidase activity","GO:0009543//chloroplast thylakoid lumen"]
[323,"CSE_Unigene16546","SW_CL4332_Contig2","-","-","+(Mostly)",990,{"v":0.989,"d":"98.90%"},11,6,5,{"v":0.27021,"d":"0.270"},{"v":0.0323301,"d":"0.0323"},"gi|225431539|ref|XP_002281894.1|","PREDICTED: uridylate kinase-like [Vitis vinifera]","gi|225431538|ref|XM_002281858.1|","PREDICTED: Vitis vinifera uridylate kinase-like (LOC100242145), mRNA","-","-","COG0528","Uridylate kinase","K09903","vvi:100242145","uridylate kinase [EC:2.7.4.22]","GO:0006399//tRNA metabolic process;GO:0045036//protein targeting to chloroplast;GO:0009793//embryo development ending in seed dormancy;GO:0016310//phosphorylation;GO:0016226//iron-sulfur cluster assembly;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009658//chloroplast organization;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0009073//aromatic amino acid family biosynthetic process;GO:0006364//rRNA processing;GO:0006221//pyrimidine nucleotide biosynthetic process;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0033862//UMP kinase activity","GO:0009507//chloroplast"]
[324,"CSE_CL4632_Contig3","SW_Unigene17211","-","-","+(Mostly)",573,{"v":0.986,"d":"98.60%"},8,3,5,{"v":0.603126,"d":"0.603"},{"v":0.363296,"d":"0.3633"},"gi|225431425|ref|XP_002273009.1|","PREDICTED: cancer-related nucleoside-triphosphatase homolog [Vitis vinifera] >gi|296088653|emb|CBI37644.3| unnamed protein product [Vitis vinifera]","gi|359476976|ref|XM_002272973.2|","PREDICTED: Vitis vinifera cancer-related nucleoside-triphosphatase homolog-like (LOC100255709), mRNA","-","-","COG1618","Predicted nucleotide kinase","K06928","vvi:100255709","nucleoside-triphosphatase THEP1 [EC:3.6.1.15]","-","GO:0019204//nucleotide phosphatase activity;GO:0005524//ATP binding;GO:0016740//transferase activity;GO:0017111//nucleoside-triphosphatase activity","GO:0005634//nucleus;GO:0005739//mitochondrion"]
[325,"CSE_Unigene16962","SW_Unigene15522","-","-","+(Mostly)",972,{"v":0.987,"d":"98.70%"},13,7,6,{"v":0.28732,"d":"0.287"},{"v":0.0254022,"d":"0.0254"},"gi|225464329|ref|XP_002271869.1|","PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Vitis vinifera] >gi|296083783|emb|CBI24000.3| unnamed protein product [Vitis vinifera]","gi|349705821|emb|FQ384360.1|","Vitis vinifera clone SS0AAG1YN02","sp|Q84L09|GONS2_ARATH","GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1","COG5070","Nucleotide-sugar transporter","K15281","vvi:100250381","solute carrier family 35","GO:0055085//transmembrane transport;GO:0015786//UDP-glucose transport;GO:0015785//UDP-galactose transport;GO:0080147//root hair cell development;GO:0048527//lateral root development;GO:0008643//carbohydrate transport","GO:0005460//UDP-glucose transmembrane transporter activity;GO:0005459//UDP-galactose transmembrane transporter activity","GO:0016021//integral to membrane;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane"]
[326,"CSE_Unigene15371","SW_Unigene16600","-","-","+(Mostly)",1110,{"v":0.987,"d":"98.70%"},14,12,2,{"v":0.0774436,"d":"0.077"},{"v":5.23311e-05,"d":"0.0001"},"gi|225466171|ref|XP_002263956.1|","PREDICTED: uncharacterized transporter sll0355 [Vitis vinifera]","gi|225466170|ref|XM_002263920.1|","PREDICTED: Vitis vinifera uncharacterized LOC100256401 (LOC100256401), mRNA","sp|Q93V85|WTR16_ARATH","WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana GN=At3g02690 PE=1 SV=1","COG0697","Permeases of the drug/metabolite transporter (DMT) superfamily","K15269","rcu:RCOM_0303930","probable blue pigment (indigoidine) exporter","-","-","GO:0009507//chloroplast;GO:0016020//membrane"]
[327,"CSE_Unigene13199","SW_Unigene1742","-","-","+(Mostly)",1788,{"v":0.993,"d":"99.30%"},12,5,7,{"v":0.368454,"d":"0.368"},{"v":0.0854482,"d":"0.0854"},"gi|359476463|ref|XP_003631844.1|","PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera] >gi|296083807|emb|CBI24024.3| unnamed protein product [Vitis vinifera]","gi|359476462|ref|XM_003631796.1|","PREDICTED: Vitis vinifera uncharacterized LOC100853048 (LOC100853048), mRNA","-","-","-","-","K10867","rcu:RCOM_0538810","nijmegen breakage syndrome protein 1","GO:0007131//reciprocal meiotic recombination;GO:0048438//floral whorl development;GO:0032504//multicellular organism reproduction;GO:0033044//regulation of chromosome organization;GO:0006355//regulation of transcription, DNA-dependent;GO:0048449//floral organ formation;GO:0006302//double-strand break repair;GO:0007059//chromosome segregation;GO:0048522//positive regulation of cellular process;GO:0000723//telomere maintenance;GO:0030154//cell differentiation;GO:0009314//response to radiation;GO:0007129//synapsis;GO:0070646//protein modification by small protein removal;GO:0006325//chromatin organization","-","-"]
[328,"CSE_Unigene9297","SW_Unigene15704","-","-","+(Mostly)",1044,{"v":0.994,"d":"99.40%"},6,5,1,{"v":0.0733576,"d":"0.073"},{"v":0.00620693,"d":"0.0062"},"gi|225429492|ref|XP_002278242.1|","PREDICTED: uncharacterized protein LOC100243991 [Vitis vinifera] >gi|296081636|emb|CBI20641.3| unnamed protein product [Vitis vinifera]","gi|225429491|ref|XM_002278206.1|","PREDICTED: Vitis vinifera uncharacterized LOC100243991 (LOC100243991), mRNA","-","-","-","-","-","-","-","GO:0015693//magnesium ion transport","GO:0015095//magnesium ion transmembrane transporter activity","GO:0009507//chloroplast;GO:0016020//membrane"]
[329,"CSE_Unigene9581","SW_Unigene10526","-","-","+(Mostly)",645,{"v":0.992,"d":"99.20%"},5,4,1,{"v":0.082125,"d":"0.082"},{"v":0.0143614,"d":"0.0144"},"gi|225429494|ref|XP_002278305.1|","PREDICTED: cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG8 [Vitis vinifera] >gi|147857102|emb|CAN81797.1| hypothetical protein VITISV_043338 [Vitis vinifera] >gi|296081637|emb|CBI20642.3| unnamed protein product [Vitis vinifera]","gi|225429493|ref|XM_002278269.1|","PREDICTED: Vitis vinifera cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8-like (LOC100266322), mRNA","sp|Q84MC2|LOG8_ARATH","Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis thaliana GN=LOG8 PE=1 SV=1","COG1611","Predicted Rossmann fold nucleotide-binding protein","K06966","gmx:100306704",null,"GO:0009691//cytokinin biosynthetic process","GO:0016799//hydrolase activity, hydrolyzing N-glycosyl compounds;GO:0016829//lyase activity;GO:0042803//protein homodimerization activity","GO:0005634//nucleus;GO:0005829//cytosol"]
[330,"CSE_Unigene24882","SW_Unigene1121","-","-","+(Mostly)",519,{"v":0.987,"d":"98.70%"},7,4,3,{"v":0.243674,"d":"0.244"},{"v":0.0674616,"d":"0.0675"},"gi|225429514|ref|XP_002279110.1|","PREDICTED: probable ADP,ATP carrier protein At5g56450 [Vitis vinifera] >gi|296081646|emb|CBI20651.3| unnamed protein product [Vitis vinifera]","gi|359475940|ref|XM_002279074.2|","PREDICTED: Vitis vinifera probable ADP,ATP carrier protein At5g56450-like (LOC100266251), mRNA","sp|Q9FM86|ADT5_ARATH","Probable ADP,ATP carrier protein At5g56450 OS=Arabidopsis thaliana GN=At5g56450 PE=2 SV=1","-","-","K05863","vvi:100266251","solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31","GO:0055085//transmembrane transport;GO:0006839//mitochondrial transport;GO:0048653//anther development","GO:0005347//ATP transmembrane transporter activity","GO:0016021//integral to membrane;GO:0005743//mitochondrial inner membrane"]
[331,"CSE_Unigene14713","SW_Unigene21965","-","-","+(Mostly)",951,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.10745,"d":"0.107"},{"v":0.0442146,"d":"0.0442"},"gi|225429746|ref|XP_002282370.1|","PREDICTED: E3 ubiquitin-protein ligase AIP2 isoform 1 [Vitis vinifera]","gi|225429745|ref|XM_002282334.1|","PREDICTED: Vitis vinifera E3 ubiquitin-protein ligase AIP2-like, transcript variant 1 (LOC100247386), mRNA","sp|Q8RXD3|AIP2_ARATH","E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1","COG5540","RING-finger-containing ubiquitin ligase","K11982","mtr:MTR_6g079660","E3 ubiquitin-protein ligase RNF115/126 [EC:6.3.2.19]","GO:0009788//negative regulation of abscisic acid mediated signaling pathway;GO:0016567//protein ubiquitination;GO:0006865//amino acid transport","GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein ligase activity;GO:0005515//protein binding","GO:0005829//cytosol;GO:0005634//nucleus"]
[332,"CSE_Unigene12646","SW_Unigene7979","-","-","+(Mostly)",564,{"v":0.982,"d":"98.20%"},10,4,6,{"v":0.547626,"d":"0.548"},{"v":0.428632,"d":"0.4286"},"gi|225429752|ref|XP_002280461.1|","PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Vitis vinifera] >gi|296081751|emb|CBI20756.3| unnamed protein product [Vitis vinifera]","gi|147845890|emb|AM427012.2|","Vitis vinifera contig VV78X232521.4, whole genome shotgun sequence","-","-","-","-","-","-","-","GO:0035335//peptidyl-tyrosine dephosphorylation","GO:0004045//aminoacyl-tRNA hydrolase activity;GO:0004725//protein tyrosine phosphatase activity","-"]
[333,"CSE_Unigene17077","SW_Unigene14029","-","-","+(Mostly)",1986,{"v":0.994,"d":"99.40%"},12,7,5,{"v":0.258286,"d":"0.258"},{"v":0.0204008,"d":"0.0204"},"gi|359475997|ref|XP_002280681.2|","PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic-like [Vitis vinifera] >gi|296081769|emb|CBI20774.3| unnamed protein product [Vitis vinifera]","gi|359475996|ref|XM_002280645.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244035 (LOC100244035), mRNA","sp|Q8RWG1|Y4139_ARATH","Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1","COG0661","Predicted unusual protein kinase","K08869","osa:4350081","aarF domain-containing kinase","GO:0006468//protein phosphorylation;GO:0080183//response to photooxidative stress;GO:0015996//chlorophyll catabolic process","GO:0004672//protein kinase activity;GO:0005524//ATP binding","GO:0010287//plastoglobule;GO:0005886//plasma membrane"]
[334,"CSE_Unigene11019","SW_Unigene12890","-","-","+(Mostly)",1185,{"v":0.99,"d":"99.00%"},12,2,10,{"v":1.04652,"d":"1.047"},{"v":0.898801,"d":"0.8988"},"gi|225429894|ref|XP_002283626.1|","PREDICTED: ribosomal RNA small subunit methyltransferase H-like [Vitis vinifera]","gi|225429893|ref|XM_002283590.1|","PREDICTED: Vitis vinifera ribosomal RNA small subunit methyltransferase H-like (LOC100264531), mRNA","-","-","COG0275","Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis","K03438","ppp:PHYPADRAFT_43703","16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]","GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0005739//mitochondrion"]
[335,"CSE_Unigene17747","SW_Unigene8145","-","-","+(Mostly)",831,{"v":0.994,"d":"99.40%"},5,3,2,{"v":0.186036,"d":"0.186"},{"v":0.0730784,"d":"0.0731"},"gi|147844011|emb|CAN79021.1|","hypothetical protein VITISV_009443 [Vitis vinifera]","gi|225429899|ref|XM_002281042.1|","PREDICTED: Vitis vinifera ribonuclease H2 subunit B-like (LOC100268103), mRNA","-","-","-","-","K10744","vvi:100268103","ribonuclease H2 subunit B","-","GO:0016787//hydrolase activity","GO:0005634//nucleus"]
[336,"CSE_CL1421_Contig1","SW_CL8545_Contig1","-","-","+(Mostly)",1203,{"v":0.993,"d":"99.30%"},8,7,1,{"v":0.0519715,"d":"0.052"},{"v":0.000578169,"d":"0.0006"},"gi|225429906|ref|XP_002283676.1|","PREDICTED: monoglyceride lipase [Vitis vinifera] >gi|147865769|emb|CAN83251.1| hypothetical protein VITISV_034794 [Vitis vinifera]","gi|225429905|ref|XM_002283640.1|","PREDICTED: Vitis vinifera monoglyceride lipase-like (LOC100254240), mRNA","-","-","COG2267","Lysophospholipase","-","-","-","GO:0010200//response to chitin","GO:0047372//acylglycerol lipase activity","-"]
[337,"CSE_Unigene12463","SW_Unigene15995","-","-","+(Mostly)",1158,{"v":0.988,"d":"98.80%"},14,7,7,{"v":0.332241,"d":"0.332"},{"v":0.0386295,"d":"0.0386"},"gi|225430001|ref|XP_002284106.1|","PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic [Vitis vinifera] >gi|296081877|emb|CBI20882.3| unnamed protein product [Vitis vinifera]","gi|225430000|ref|XM_002284070.1|","PREDICTED: Vitis vinifera branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic (LOC100266456), mRNA","sp|Q8L493|BCAL3_ARATH","Branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=At5g57850 PE=2 SV=1","COG0115","Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase","K00826","vvi:100266456","branched-chain amino acid aminotransferase [EC:2.6.1.42]","GO:0046654//tetrahydrofolate biosynthetic process;GO:0008153//para-aminobenzoic acid biosynthetic process","GO:0008696//4-amino-4-deoxychorismate lyase activity;GO:0047810//D-alanine:2-oxoglutarate aminotransferase activity","GO:0009570//chloroplast stroma"]
[338,"CSE_Unigene19165","SW_Unigene16984","-","-","+(Mostly)",2529,{"v":0.997,"d":"99.70%"},8,3,5,{"v":0.572189,"d":"0.572"},{"v":0.335832,"d":"0.3358"},"gi|225430033|ref|XP_002284239.1|","PREDICTED: beta-adaptin-like protein A [Vitis vinifera] >gi|296081892|emb|CBI20897.3| unnamed protein product [Vitis vinifera]","gi|225430032|ref|XM_002284203.1|","PREDICTED: Vitis vinifera beta-adaptin-like protein A (LOC100252486), mRNA","sp|Q9LDK9|APBLA_ARATH","Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD PE=1 SV=1","COG5096","Vesicle coat complex, various subunits","K12392","osa:4332864","AP-1 complex subunit beta-1","GO:0030244//cellulose biosynthetic process;GO:0048193//Golgi vesicle transport;GO:0006886//intracellular protein transport;GO:0006487//protein N-linked glycosylation","GO:0008565//protein transporter activity;GO:0043424//protein histidine kinase binding","GO:0030131//clathrin adaptor complex;GO:0005634//nucleus"]
[339,"CSE_Unigene17758","SW_Unigene16479","-","-","+(Mostly)",906,{"v":0.993,"d":"99.30%"},6,5,1,{"v":0.0691054,"d":"0.069"},{"v":0.00507973,"d":"0.0051"},"gi|225430037|ref|XP_002284246.1|","PREDICTED: GTP-binding protein At2g22870 [Vitis vinifera] >gi|296081893|emb|CBI20898.3| unnamed protein product [Vitis vinifera]","gi|359476378|ref|XM_002284210.2|","PREDICTED: Vitis vinifera GTP-binding protein At2g22870-like (LOC100257669), mRNA","sp|O81004|Y2287_ARATH","GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2","COG0218","Predicted GTPase","K03978","pop:POPTR_867910","GTP-binding protein","GO:0006364//rRNA processing;GO:0009658//chloroplast organization;GO:0000917//barrier septum assembly;GO:0006399//tRNA metabolic process","GO:0005525//GTP binding","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[340,"CSE_Unigene12451","SW_Unigene23098","-","-","+(Mostly)",504,{"v":0.99,"d":"99.00%"},5,2,3,{"v":0.470314,"d":"0.470"},{"v":0.345159,"d":"0.3452"},"gi|225430075|ref|XP_002284484.1|","PREDICTED: group 2 truncated hemoglobin yjbI [Vitis vinifera] >gi|296081919|emb|CBI20924.3| unnamed protein product [Vitis vinifera]","gi|359476387|ref|XM_002284448.2|","PREDICTED: Vitis vinifera group 2 truncated hemoglobin yjbI-like (LOC100266294), mRNA","-","-","COG2346","Truncated hemoglobins","-","-","-","GO:0015671//oxygen transport;GO:0009733//response to auxin stimulus;GO:0001666//response to hypoxia","GO:0005344//oxygen transporter activity;GO:0005506//iron ion binding;GO:0020037//heme binding;GO:0019825//oxygen binding","GO:0005886//plasma membrane"]
[341,"CSE_Unigene8602","SW_Unigene23298","-","-","+(Mostly)",1002,{"v":0.986,"d":"98.60%"},8,2,6,{"v":1.05607,"d":"1.056"},{"v":0.911256,"d":"0.9113"},"gi|225430293|ref|XP_002282677.1|","PREDICTED: putative L-ascorbate peroxidase 6 [Vitis vinifera] >gi|296082040|emb|CBI21045.3| unnamed protein product [Vitis vinifera]","gi|359475819|ref|XM_002282641.2|","PREDICTED: Vitis vinifera L-ascorbate peroxidase-like (LOC100247405), mRNA","sp|Q1PER6|APX2_ARATH","L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3","COG0376","Catalase (peroxidase I)","K00434","vvi:100247405","L-ascorbate peroxidase [EC:1.11.1.11]","GO:0055114//oxidation-reduction process;GO:0006979//response to oxidative stress","GO:0020037//heme binding;GO:0016688//L-ascorbate peroxidase activity","GO:0005576//extracellular region;GO:0005829//cytosol;GO:0009536//plastid"]
[342,"CSE_Unigene15318","SW_Unigene22191","-","-","+(Mostly)",1386,{"v":0.997,"d":"99.70%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225430398|ref|XP_002285385.1|","PREDICTED: aspartate aminotransferase, chloroplastic [Vitis vinifera] >gi|296082090|emb|CBI21095.3| unnamed protein product [Vitis vinifera]","gi|359475851|ref|XM_002285349.2|","PREDICTED: Vitis vinifera aspartate aminotransferase, chloroplastic-like (LOC100242364), mRNA","sp|P46248|AAT5_ARATH","Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2","COG1448","Aspartate/tyrosine/aromatic aminotransferase","K00811","vvi:100242364","aspartate aminotransferase, chloroplastic [EC:2.6.1.1]","GO:0009693//ethylene biosynthetic process;GO:0009409//response to cold;GO:0006520//cellular amino acid metabolic process;GO:0046686//response to cadmium ion","GO:0004069//L-aspartate:2-oxoglutarate aminotransferase activity;GO:0080130//L-phenylalanine:2-oxoglutarate aminotransferase activity;GO:0033853//aspartate-prephenate aminotransferase activity;GO:0033854//glutamate-prephenate aminotransferase activity;GO:0030170//pyridoxal phosphate binding","GO:0005829//cytosol;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0010319//stromule;GO:0048046//apoplast"]
[343,"CSE_CL4624_Contig1","SW_Unigene567","-","-","+(Mostly)",1908,{"v":0.992,"d":"99.20%"},15,7,8,{"v":0.370516,"d":"0.371"},{"v":0.0517153,"d":"0.0517"},"gi|296082097|emb|CBI21102.3|","unnamed protein product [Vitis vinifera]","gi|359475861|ref|XM_002282972.2|","PREDICTED: Vitis vinifera neurochondrin-like (LOC100260969), mRNA","-","-","-","-","-","-","-","GO:0007346//regulation of mitotic cell cycle","-","GO:0005737//cytoplasm"]
[344,"CSE_Unigene16835","SW_Unigene15871","-","-","+(Mostly)",639,{"v":0.986,"d":"98.60%"},9,7,2,{"v":0.069039,"d":"0.069"},{"v":0.000284998,"d":"0.0003"},"gi|225430510|ref|XP_002285564.1|","PREDICTED: phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Vitis vinifera]","gi|359475891|ref|XM_002285528.2|","PREDICTED: Vitis vinifera phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like (LOC100245697), mRNA","sp|P52032|GPX1_ARATH","Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=1 SV=2","COG0386","Glutathione peroxidase","K00432","vvi:100245697","glutathione peroxidase [EC:1.11.1.9]","GO:0009407//toxin catabolic process;GO:0006979//response to oxidative stress;GO:0055114//oxidation-reduction process","GO:0004602//glutathione peroxidase activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0009535//chloroplast thylakoid membrane"]
[345,"CSE_CL1003_Contig1","SW_Unigene17588","-","-","+(Mostly)",1638,{"v":0.985,"d":"98.50%"},24,10,14,{"v":0.47806,"d":"0.478"},{"v":0.0947526,"d":"0.0948"},"gi|359475902|ref|XP_002283433.2|","PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera] >gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]","gi|359475901|ref|XM_002283397.2|","PREDICTED: Vitis vinifera protein TIC 55, chloroplastic-like (LOC100259354), mRNA","sp|O49931|TIC55_PEA","Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1","COG4638","Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit","K13071","ppp:PHYPADRAFT_134389","pheophorbide a oxygenase [EC:1.14.12.20]","GO:0045036//protein targeting to chloroplast;GO:0055114//oxidation-reduction process","GO:0046872//metal ion binding;GO:0010277//chlorophyllide a oxygenase [overall] activity;GO:0018489//vanillate monooxygenase activity;GO:0051537//2 iron, 2 sulfur cluster binding","GO:0009941//chloroplast envelope"]
[346,"CSE_Unigene16459","SW_Unigene17123","-","-","+(Mostly)",2439,{"v":0.99,"d":"99.00%"},23,16,7,{"v":0.170649,"d":"0.171"},{"v":4.6439e-05,"d":"0.0000"},"gi|296090500|emb|CBI40831.3|","unnamed protein product [Vitis vinifera]","gi|225462770|ref|XM_002263429.1|","PREDICTED: Vitis vinifera uncharacterized LOC100242787 (LOC100242787), mRNA","sp|Q9MA15|Y1796_ARATH","Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1","COG0661","Predicted unusual protein kinase","K08869","vvi:100242787","aarF domain-containing kinase","GO:0006468//protein phosphorylation;GO:0009744//response to sucrose stimulus;GO:0010224//response to UV-B;GO:0009813//flavonoid biosynthetic process","GO:0004672//protein kinase activity;GO:0005524//ATP binding","GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[347,"CSE_Unigene15733","SW_Unigene6121","-","-","+(Mostly)",762,{"v":0.99,"d":"99.00%"},5,2,3,{"v":0.49261,"d":"0.493"},{"v":0.361818,"d":"0.3618"},"gi|225433870|ref|XP_002265252.1|","PREDICTED: tetrapyrrole-binding protein, chloroplastic [Vitis vinifera] >gi|147779401|emb|CAN76796.1| hypothetical protein VITISV_030118 [Vitis vinifera]","gi|349724440|emb|FQ393390.1|","Vitis vinifera clone SS0AFA26YD18","sp|Q9LX31|GUN4C_ARATH","Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GUN4 PE=1 SV=1","COG0455","ATPases involved in chromosome partitioning","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0006098//pentose-phosphate shunt;GO:0016117//carotenoid biosynthetic process;GO:0043085//positive regulation of catalytic activity;GO:0010207//photosystem II assembly;GO:0010019//chloroplast-nucleus signaling pathway;GO:0015995//chlorophyll biosynthetic process;GO:0009965//leaf morphogenesis;GO:0030154//cell differentiation;GO:0019344//cysteine biosynthetic process;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0009073//aromatic amino acid family biosynthetic process;GO:0006364//rRNA processing","GO:0046906//tetrapyrrole binding;GO:0019899//enzyme binding","GO:0009507//chloroplast"]
[348,"CSE_Unigene15817","SW_Unigene7255","-","-","+(Mostly)",942,{"v":0.994,"d":"99.40%"},6,5,1,{"v":0.0588964,"d":"0.059"},{"v":0.00290383,"d":"0.0029"},"gi|297743811|emb|CBI36694.3|","unnamed protein product [Vitis vinifera]","gi|359478137|ref|XM_002268829.2|","PREDICTED: Vitis vinifera uncharacterized LOC100247353 (LOC100247353), mRNA","-","-","-","-","-","-","-","-","-","-"]
[349,"CSE_Unigene17944","SW_Unigene356","-","-","+(Mostly)",1374,{"v":0.993,"d":"99.30%"},10,7,3,{"v":0.137499,"d":"0.137"},{"v":0.000342046,"d":"0.0003"},"gi|297745171|emb|CBI39163.3|","unnamed protein product [Vitis vinifera]","gi|225433775|ref|XM_002268663.1|","PREDICTED: Vitis vinifera uncharacterized LOC100253226 (LOC100253226), mRNA","sp|Q0WMN5|Y3913_ARATH","Uncharacterized protein At3g49140 OS=Arabidopsis thaliana GN=At3g49140 PE=1 SV=2","-","-","-","-","-","GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity;GO:0010181//FMN binding","GO:0005634//nucleus"]
[350,"CSE_CL1216_Contig4","SW_CL4854_Contig5","-","-","+(Mostly)",672,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225432153|ref|XP_002265997.1|","PREDICTED: S-adenosyl-L-methionine-dependent methyltransferase-like [Vitis vinifera] >gi|297736798|emb|CBI25999.3| unnamed protein product [Vitis vinifera]","gi|225432152|ref|XM_002265961.1|","PREDICTED: Vitis vinifera S-adenosyl-L-methionine-dependent methyltransferase-like (LOC100249334), mRNA","-","-","-","-","-","-","-","GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0005886//plasma membrane"]
[351,"CSE_Unigene1105","SW_Unigene17035","-","-","+(Mostly)",1755,{"v":0.994,"d":"99.40%"},10,5,5,{"v":0.397944,"d":"0.398"},{"v":0.12597,"d":"0.1260"},"gi|225432183|ref|XP_002268377.1|","PREDICTED: guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase [Vitis vinifera] >gi|297736813|emb|CBI26014.3| unnamed protein product [Vitis vinifera]","gi|359477300|ref|XM_002268341.2|","PREDICTED: Vitis vinifera guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase-like (LOC100263094), mRNA","sp|Q8VWY6|POLC1_TOBAC","Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1","COG0317","Guanosine polyphosphate pyrophosphohydrolases/synthetases","K13448","pop:POPTR_767565","calcium-binding protein CML","GO:0016310//phosphorylation;GO:0015969//guanosine tetraphosphate metabolic process","GO:0008893//guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity;GO:0008728//GTP diphosphokinase activity;GO:0016301//kinase activity;GO:0005509//calcium ion binding","GO:0009507//chloroplast"]
[352,"CSE_Unigene387","SW_Unigene22487","-","-","+(Mostly)",2085,{"v":0.993,"d":"99.30%"},15,8,7,{"v":0.288864,"d":"0.289"},{"v":0.0170538,"d":"0.0171"},"gi|225432238|ref|XP_002275635.1|","PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis vinifera]","gi|359477272|ref|XM_002275599.2|","PREDICTED: Vitis vinifera DEAD-box ATP-dependent RNA helicase 50-like (LOC100245866), mRNA","sp|Q8GUG7|RH50_ARATH","DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana GN=RH50 PE=2 SV=2","COG0513","Superfamily II DNA and RNA helicases","K13179","sbi:SORBI_01g050040","ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]","GO:0010103//stomatal complex morphogenesis;GO:0006399//tRNA metabolic process;GO:0071369//cellular response to ethylene stimulus;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0071446//cellular response to salicylic acid stimulus;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0071395//cellular response to jasmonic acid stimulus;GO:0016226//iron-sulfur cluster assembly;GO:0009658//chloroplast organization;GO:0009817//defense response to fungus, incompatible interaction;GO:0006364//rRNA processing;GO:0006968//cellular defense response","GO:0003676//nucleic acid binding;GO:0004004//ATP-dependent RNA helicase activity;GO:0005524//ATP binding","GO:0009507//chloroplast"]
[353,"CSE_Unigene23316","SW_Unigene10216","-","-","+(Mostly)",471,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|359477281|ref|XP_003631958.1|","PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like [Vitis vinifera]","gi|359477280|ref|XM_003631910.1|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At3g06920-like (LOC100249392), mRNA","sp|Q9M907|PP217_ARATH","Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","-"]
[354,"CSE_Unigene11999","SW_Unigene6118","-","-","+(Mostly)",660,{"v":0.998,"d":"99.80%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225432292|ref|XP_002273101.1|","PREDICTED: vesicle-associated membrane protein 724 isoform 1 [Vitis vinifera] >gi|297736869|emb|CBI26070.3| unnamed protein product [Vitis vinifera]","gi|359477409|ref|XM_002273065.2|","PREDICTED: Vitis vinifera vesicle-associated membrane protein 724-like, transcript variant 1 (LOC100254439), mRNA","sp|O23429|VA724_ARATH","Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2","COG5143","Synaptobrevin/VAMP-like protein","K08511","ath:AT4G15780","vesicle-associated membrane protein 72","GO:0048573//photoperiodism, flowering;GO:0016192//vesicle-mediated transport","-","GO:0005886//plasma membrane;GO:0016021//integral to membrane"]
[355,"CSE_Unigene20436","SW_Unigene10716","-","-","+(Mostly)",3210,{"v":0.994,"d":"99.40%"},20,{"v":10.8777,"d":"11"},{"v":9.12232,"d":"9"},{"v":0.297272,"d":"0.297"},{"v":0.00585625,"d":"0.0059"},"gi|225432320|ref|XP_002276207.1|","PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]","gi|225432319|ref|XM_002276171.1|","PREDICTED: Vitis vinifera isoleucyl-tRNA synthetase-like (LOC100254604), mRNA","sp|P93736|SYV_ARATH","Valine-tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2","COG0060","Isoleucyl-tRNA synthetase","K01870","vvi:100254604","isoleucyl-tRNA synthetase [EC:6.1.1.5]","GO:0016117//carotenoid biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0006450//regulation of translational fidelity;GO:0016226//iron-sulfur cluster assembly;GO:0006428//isoleucyl-tRNA aminoacylation;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0004822//isoleucine-tRNA ligase activity;GO:0002161//aminoacyl-tRNA editing activity;GO:0005524//ATP binding","GO:0009570//chloroplast stroma"]
[356,"CSE_Unigene15605","SW_Unigene12750","-","-","+(Mostly)",894,{"v":0.993,"d":"99.30%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|359477453|ref|XP_003631980.1|","PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform 2 [Vitis vinifera] >gi|297736941|emb|CBI26142.3| unnamed protein product [Vitis vinifera]","gi|359477452|ref|XM_003631932.1|","PREDICTED: Vitis vinifera prolyl 4-hydroxylase subunit alpha-1-like, transcript variant 2 (LOC100245913), mRNA","-","-","-","-","K00472","vvi:100245913","prolyl 4-hydroxylase [EC:1.14.11.2]","GO:0055114//oxidation-reduction process;GO:0016049//cell growth;GO:0000902//cell morphogenesis;GO:0018401//peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0048193//Golgi vesicle transport","GO:0004656//procollagen-proline 4-dioxygenase activity;GO:0031418//L-ascorbic acid binding;GO:0005506//iron ion binding","GO:0005576//extracellular region;GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[357,"CSE_CL1943_Contig1","SW_Unigene12529","-","-","+(Mostly)",963,{"v":0.992,"d":"99.20%"},8,5,3,{"v":0.23935,"d":"0.239"},{"v":0.0481671,"d":"0.0482"},"gi|359477457|ref|XP_002278619.2|","PREDICTED: uncharacterized protein LOC100252741 [Vitis vinifera] >gi|297736943|emb|CBI26144.3| unnamed protein product [Vitis vinifera]","gi|359477456|ref|XM_002278583.2|","PREDICTED: Vitis vinifera uncharacterized LOC100252741 (LOC100252741), mRNA","sp|Q93W28|Y4554_ARATH","Uncharacterized protein At4g15545 OS=Arabidopsis thaliana GN=At4g15545 PE=1 SV=1","-","-","-","-","-","GO:0046777//protein autophosphorylation;GO:0042744//hydrogen peroxide catabolic process;GO:0009750//response to fructose stimulus;GO:0009651//response to salt stress;GO:0010075//regulation of meristem growth;GO:0009637//response to blue light;GO:0010155//regulation of proton transport;GO:0006833//water transport","-","-"]
[358,"CSE_Unigene241","SW_Unigene15386","-","-","+(Mostly)",519,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.144861,"d":"0.145"},{"v":0.118643,"d":"0.1186"},"gi|225432538|ref|XP_002280487.1|","PREDICTED: protein phosphatase Slingshot homolog [Vitis vinifera] >gi|297736986|emb|CBI26187.3| unnamed protein product [Vitis vinifera]","gi|225432537|ref|XM_002280451.1|","PREDICTED: Vitis vinifera protein phosphatase Slingshot homolog-like (LOC100264956), mRNA","sp|Q9ZR37|DUS1_ARATH","Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1","COG2453","Predicted protein-tyrosine phosphatase","K05766","ath:AT3G23610","slingshot","GO:0071472//cellular response to salt stress;GO:0009611//response to wounding;GO:0000188//inactivation of MAPK activity;GO:0070417//cellular response to cold;GO:0034605//cellular response to heat;GO:0006661//phosphatidylinositol biosynthetic process;GO:0010193//response to ozone;GO:0006470//protein dephosphorylation","GO:0008138//protein tyrosine/serine/threonine phosphatase activity;GO:0033549//MAP kinase phosphatase activity;GO:0005516//calmodulin binding","GO:0009507//chloroplast;GO:0005886//plasma membrane;GO:0005634//nucleus"]
[359,"CSE_Unigene18875","SW_Unigene12269","-","-","+(Mostly)",2313,{"v":0.995,"d":"99.50%"},12,9,3,{"v":0.0914098,"d":"0.091"},{"v":0.000117462,"d":"0.0001"},"gi|297737022|emb|CBI26223.3|","unnamed protein product [Vitis vinifera]","gi|301318137|gb|HM369804.1|","Vitis vinifera cultivar PN40024 chloride channel ClC6 mRNA, complete cds","sp|P92943|CLCD_ARATH","Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2","COG0038","Chloride channel protein EriC","K05016","vvi:100261408","chloride channel 7","GO:0030002//cellular anion homeostasis;GO:0007155//cell adhesion;GO:0045010//actin nucleation;GO:0006821//chloride transport;GO:0009826//unidimensional cell growth;GO:0010090//trichome morphogenesis;GO:0010038//response to metal ion;GO:0048765//root hair cell differentiation;GO:0055085//transmembrane transport;GO:0071555//cell wall organization","GO:0005247//voltage-gated chloride channel activity","GO:0005802//trans-Golgi network;GO:0016021//integral to membrane"]
[360,"CSE_Unigene17086","SW_Unigene6623","-","-","+(Mostly)",849,{"v":0.993,"d":"99.30%"},6,3,3,{"v":0.314212,"d":"0.314"},{"v":0.153924,"d":"0.1539"},"gi|225432658|ref|XP_002282361.1|","PREDICTED: imidazoleglycerol-phosphate dehydratase 2-like [Vitis vinifera]","gi|359477519|ref|XM_002282325.2|","PREDICTED: Vitis vinifera imidazoleglycerol-phosphate dehydratase 2-like (LOC100264953), mRNA","sp|Q43072|HIS7_PEA","Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1","COG0131","Imidazoleglycerol-phosphate dehydratase","K01693","vvi:100264953","imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]","GO:0000105//histidine biosynthetic process","GO:0004424//imidazoleglycerol-phosphate dehydratase activity","GO:0009507//chloroplast"]
[361,"CSE_Unigene13312","SW_Unigene7844","-","-","+(Mostly)",1689,{"v":0.993,"d":"99.30%"},11,8,3,{"v":0.131037,"d":"0.131"},{"v":0.00157693,"d":"0.0016"},"gi|297737084|emb|CBI26285.3|","unnamed protein product [Vitis vinifera]","gi|225432733|ref|XM_002278999.1|","PREDICTED: Vitis vinifera ATP-dependent RNA helicase SUPV3L1, mitochondrial-like (LOC100264771), mRNA","-","-","COG0513","Superfamily II DNA and RNA helicases","-","-","-","GO:0009561//megagametogenesis;GO:0016070//RNA metabolic process;GO:0009555//pollen development","GO:0004004//ATP-dependent RNA helicase activity;GO:0003676//nucleic acid binding;GO:0005524//ATP binding","GO:0005739//mitochondrion"]
[362,"CSE_Unigene482","SW_Unigene4551","-","-","+(Mostly)",1308,{"v":0.989,"d":"98.90%"},15,7,8,{"v":0.394147,"d":"0.394"},{"v":0.065023,"d":"0.0650"},"gi|225432943|ref|XP_002284351.1|","PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis vinifera]","gi|349725772|emb|FQ393724.1|","Vitis vinifera clone SS0AFA24YJ20","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus;GO:0005737//cytoplasm"]
[363,"CSE_Unigene17654","SW_Unigene21488","-","-","+(Mostly)",1416,{"v":0.989,"d":"98.90%"},16,11,5,{"v":0.142086,"d":"0.142"},{"v":0.0001929,"d":"0.0002"},"gi|225433514|ref|XP_002267004.1|","PREDICTED: selenium-binding protein 1 [Vitis vinifera] >gi|298205245|emb|CBI17304.3| unnamed protein product [Vitis vinifera]","gi|225433513|ref|XM_002266968.1|","PREDICTED: Vitis vinifera selenium-binding protein 1-like (LOC100265737), mRNA","sp|O23264|SEBP1_ARATH","Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1 SV=1","-","-","-","-","-","GO:0046686//response to cadmium ion;GO:0010197//polar nucleus fusion;GO:0071291//cellular response to selenium ion;GO:0042542//response to hydrogen peroxide;GO:0000103//sulfate assimilation","GO:0008430//selenium binding","-"]
[364,"CSE_Unigene12048","SW_Unigene8879","-","-","+(Mostly)",753,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225433053|ref|XP_002284752.1|","PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial [Vitis vinifera] >gi|296083620|emb|CBI23609.3| unnamed protein product [Vitis vinifera]","gi|225433052|ref|XM_002284716.1|","PREDICTED: Vitis vinifera electron transfer flavoprotein subunit beta, mitochondrial-like (LOC100256297), mRNA","sp|Q9LSW8|ETFB_ARATH","Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1","COG2086","Electron transfer flavoprotein, beta subunit","K03521","vvi:100256297","electron transfer flavoprotein beta subunit","GO:0022900//electron transport chain;GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0006552//leucine catabolic process;GO:0015996//chlorophyll catabolic process","GO:0009055//electron carrier activity","GO:0005759//mitochondrial matrix"]
[365,"CSE_CL5865_Contig2","SW_CL796_Contig1","-","-","+(Mostly)",1224,{"v":0.993,"d":"99.30%"},8,{"v":2.62493,"d":"3"},{"v":5.37507,"d":"5"},{"v":0.710067,"d":"0.710"},{"v":0.596513,"d":"0.5965"},"gi|296083662|emb|CBI23651.3|","unnamed protein product [Vitis vinifera]","gi|359477739|ref|XM_002281299.2|","PREDICTED: Vitis vinifera protein tas-like (LOC100259668), mRNA","sp|O23016|KCAB_ARATH","Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana GN=KAB1 PE=1 SV=1","COG0667","Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)","K14521","vcn:VOLCADRAFT_98273","N-acetyltransferase 10 [EC:2.3.1.-]","GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0055114//oxidation-reduction process","GO:0004032//alditol:NADP+ 1-oxidoreductase activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[366,"CSE_Unigene17244","SW_Unigene15515","-","-","+(Mostly)",813,{"v":0.97,"d":"97.00%"},24,9,15,{"v":0.702944,"d":"0.703"},{"v":0.496796,"d":"0.4968"},"gi|147833017|emb|CAN66121.1|","hypothetical protein VITISV_002805 [Vitis vinifera]","gi|359477671|ref|XM_002285290.2|","PREDICTED: Vitis vinifera probable plastid-lipid-associated protein 6, chloroplastic-like (LOC100254627), mRNA","sp|Q9LW57|PAP6_ARATH","Probable plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1","-","-","-","-","-","-","GO:0005198//structural molecule activity","GO:0010287//plastoglobule;GO:0031977//thylakoid lumen;GO:0005886//plasma membrane;GO:0005634//nucleus;GO:0009535//chloroplast thylakoid membrane"]
[367,"CSE_Unigene12476","SW_Unigene18542","-","-","+(Mostly)",834,{"v":0.989,"d":"98.90%"},9,7,2,{"v":0.101839,"d":"0.102"},{"v":0.00194082,"d":"0.0019"},"gi|296083731|emb|CBI23720.3|","unnamed protein product [Vitis vinifera]","gi|359477775|ref|XM_002285433.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261382 (LOC100261382), mRNA","sp|P19684|ROC5_NICSY","33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1","COG0724","RNA-binding proteins (RRM domain)","K11294","smo:SELMODRAFT_15428","nucleolin","-","GO:0003676//nucleic acid binding;GO:0000166//nucleotide binding","GO:0030529//ribonucleoprotein complex"]
[368,"CSE_CL2752_Contig3","SW_CL3940_Contig1","-","-","+(Mostly)",1329,{"v":0.994,"d":"99.40%"},8,{"v":5.8499,"d":"6"},{"v":2.1501,"d":"2"},{"v":0.115782,"d":"0.116"},{"v":0.00339061,"d":"0.0034"},"gi|225433343|ref|XP_002285592.1|","PREDICTED: uncharacterized protein all1601 [Vitis vinifera] >gi|297741879|emb|CBI33314.3| unnamed protein product [Vitis vinifera]","gi|359477862|ref|XM_002285556.2|","PREDICTED: Vitis vinifera uncharacterized LOC100254621 (LOC100254621), mRNA","sp|Q8GS60|HCAR_ARATH","7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Arabidopsis thaliana GN=HCAR PE=1 SV=1","COG1035","Coenzyme F420-reducing hydrogenase, beta subunit","K00441","vvi:100254621","coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1]","GO:0033354//chlorophyll cycle;GO:0055114//oxidation-reduction process","GO:0090415//7-hydroxymethyl chlorophyll a reductase activity;GO:0050502//cis-zeatin O-beta-D-glucosyltransferase activity;GO:0050403//trans-zeatin O-beta-D-glucosyltransferase activity;GO:0050454//coenzyme F420 hydrogenase activity","GO:0009507//chloroplast"]
[369,"CSE_Unigene17763","SW_Unigene4296","-","-","+(Mostly)",1062,{"v":0.989,"d":"98.90%"},12,4,8,{"v":0.734423,"d":"0.734"},{"v":0.720905,"d":"0.7209"},"gi|225433391|ref|XP_002285620.1|","PREDICTED: GDT1-like protein 2, chloroplastic [Vitis vinifera] >gi|297741903|emb|CBI33338.3| unnamed protein product [Vitis vinifera]","gi|359477861|ref|XM_002285584.2|","PREDICTED: Vitis vinifera GDT1-like protein 2, chloroplastic (LOC100256177), mRNA","sp|Q9T0H9|GDT12_ARATH","GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2","COG2119","Predicted membrane protein","-","-","-","-","-","GO:0016021//integral to membrane;GO:0009706//chloroplast inner membrane"]
[370,"CSE_CL3715_Contig1","SW_Unigene13954","-","-","+(Mostly)",1833,{"v":0.995,"d":"99.50%"},9,{"v":4.74774,"d":"5"},{"v":4.25226,"d":"4"},{"v":0.33978,"d":"0.340"},{"v":0.0714301,"d":"0.0714"},"gi|225433434|ref|XP_002285667.1|","PREDICTED: dihydroxy-acid dehydratase-like [Vitis vinifera]","gi|359477803|ref|XM_002285631.2|","PREDICTED: Vitis vinifera dihydroxy-acid dehydratase-like (LOC100242520), mRNA","-","-","COG0129","Dihydroxyacid dehydratase/phosphogluconate dehydratase","K01687","vvi:100242520","dihydroxy-acid dehydratase [EC:4.2.1.9]","GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0009555//pollen development;GO:0009082//branched-chain amino acid biosynthetic process","GO:0005507//copper ion binding;GO:0004160//dihydroxy-acid dehydratase activity","GO:0005829//cytosol;GO:0009570//chloroplast stroma"]
[371,"CSE_Unigene1408","SW_Unigene12982","-","-","+(Mostly)",1029,{"v":0.983,"d":"98.30%"},18,12,6,{"v":0.162278,"d":"0.162"},{"v":0.000209548,"d":"0.0002"},"gi|225433680|ref|XP_002265738.1|","PREDICTED: uncharacterized protein LOC100266927 [Vitis vinifera] >gi|296089617|emb|CBI39436.3| unnamed protein product [Vitis vinifera]","gi|147838016|emb|AM446045.2|","Vitis vinifera contig VV78X139536.5, whole genome shotgun sequence","-","-","-","-","-","-","-","GO:0009793//embryo development ending in seed dormancy","-","GO:0005634//nucleus;GO:0009536//plastid"]
[372,"CSE_Unigene17948","SW_Unigene22645","-","-","+(Mostly)",1875,{"v":0.995,"d":"99.50%"},9,8,1,{"v":0.0391232,"d":"0.039"},{"v":7.50699e-05,"d":"0.0001"},"gi|225433705|ref|XP_002267875.1|","PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis vinifera] >gi|296089629|emb|CBI39448.3| unnamed protein product [Vitis vinifera]","gi|359477993|ref|XM_002267839.2|","PREDICTED: Vitis vinifera ATP-dependent DNA helicase 2 subunit KU70-like (LOC100265198), mRNA","sp|Q9FQ08|KU70_ARATH","ATP-dependent DNA helicase 2 subunit KU70 OS=Arabidopsis thaliana GN=KU70 PE=1 SV=1","-","-","K10884","vvi:100265198","ATP-dependent DNA helicase 2 subunit 1","GO:0006310//DNA recombination;GO:0000723//telomere maintenance;GO:0009408//response to heat;GO:0006303//double-strand break repair via nonhomologous end joining","GO:0042162//telomeric DNA binding;GO:0003684//damaged DNA binding;GO:0003690//double-stranded DNA binding;GO:0004003//ATP-dependent DNA helicase activity;GO:0005524//ATP binding;GO:0005515//protein binding","GO:0043564//Ku70:Ku80 complex;GO:0005958//DNA-dependent protein kinase-DNA ligase 4 complex"]
[373,"CSE_Unigene18897","SW_Unigene12227","-","-","+(Mostly)",2133,{"v":0.991,"d":"99.10%"},20,10,10,{"v":0.319645,"d":"0.320"},{"v":0.0112309,"d":"0.0112"},"gi|296083212|emb|CBI22848.3|","unnamed protein product [Vitis vinifera]","gi|359477101|ref|XM_002280149.2|","PREDICTED: Vitis vinifera uncharacterized LOC100246610 (LOC100246610), mRNA","sp|Q8GYX8|DNJ10_ARATH","Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2","COG2214","DnaJ-class molecular chaperone","K09534","osa:4352775","DnaJ homolog subfamily C member 14","-","-","-"]
[374,"CSE_Unigene20003","SW_Unigene19475","-","-","+(Mostly)",2349,{"v":0.984,"d":"98.40%"},22,16,6,{"v":0.114239,"d":"0.114"},{"v":1.48863e-07,"d":"0.0000"},"gi|359477208|ref|XP_002279515.2|","PREDICTED: flowering time control protein FCA [Vitis vinifera]","gi|359477207|ref|XM_002279479.2|","PREDICTED: Vitis vinifera flowering time control (FCA), mRNA","sp|O04425|FCA_ARATH","Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2","COG5648","Chromatin-associated proteins containing the HMG domain","K13207","ppp:PHYPADRAFT_115029","CUG-BP- and ETR3-like factor","GO:0031048//chromatin silencing by small RNA;GO:0009790//embryo development;GO:0007059//chromosome segregation;GO:0022402//cell cycle process;GO:0009553//embryo sac development;GO:0009909//regulation of flower development;GO:0048316//seed development","GO:0003723//RNA binding;GO:0010427//abscisic acid binding","GO:0044446//intracellular organelle part"]
[375,"CSE_Unigene1214","SW_Unigene17866","-","-","+(Mostly)",801,{"v":0.989,"d":"98.90%"},9,6,3,{"v":0.154425,"d":"0.154"},{"v":0.00759949,"d":"0.0076"},"gi|225431978|ref|XP_002278726.1|","PREDICTED: 3-hydroxypropionyl-coenzyme A dehydratase [Vitis vinifera] >gi|296083235|emb|CBI22871.3| unnamed protein product [Vitis vinifera]","gi|225431977|ref|XM_002278690.1|","PREDICTED: Vitis vinifera 3-hydroxypropionyl-coenzyme A dehydratase-like (LOC100246523), mRNA","sp|Q8GYN9|MENB_ARATH","1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2","COG1024","Enoyl-CoA hydratase/carnithine racemase","K01661","vvi:100246470","naphthoate synthase [EC:4.1.3.36]","GO:0006635//fatty acid beta-oxidation","GO:0016853//isomerase activity;GO:0004300//enoyl-CoA hydratase activity","GO:0005777//peroxisome;GO:0005829//cytosol;GO:0005739//mitochondrion"]
[376,"CSE_CL2859_Contig2","SW_Unigene5947","-","-","+(Mostly)",1785,{"v":0.992,"d":"99.20%"},15,10,5,{"v":0.173686,"d":"0.174"},{"v":0.00108654,"d":"0.0011"},"gi|225431946|ref|XP_002277743.1|","PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] >gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera]","gi|225431945|ref|XM_002277707.1|","PREDICTED: Vitis vinifera aldehyde dehydrogenase 22A1-like (LOC100249882), mRNA","sp|Q0WSF1|AL221_ARATH","Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2","COG1012","NAD-dependent aldehyde dehydrogenases","K00130","osa:4345606","betaine-aldehyde dehydrogenase [EC:1.2.1.8]","GO:0009086//methionine biosynthetic process;GO:0055114//oxidation-reduction process;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation","GO:0004028//3-chloroallyl aldehyde dehydrogenase activity;GO:0004029//aldehyde dehydrogenase (NAD) activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005783//endoplasmic reticulum"]
[377,"CSE_CL4572_Contig2","SW_Unigene11849","-","-","+(Mostly)",477,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.360896,"d":"0.361"},{"v":0.391232,"d":"0.3912"},"gi|225431940|ref|XP_002277653.1|","PREDICTED: universal stress protein A-like protein isoform 1 [Vitis vinifera]","gi|225431939|ref|XM_002277617.1|","PREDICTED: Vitis vinifera universal stress protein A-like protein, transcript variant 1 (LOC100255026), mRNA","sp|Q8LGG8|USPAL_ARATH","Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2","COG0589","Universal stress protein UspA and related nucleotide-binding proteins","-","-","-","GO:0006623//protein targeting to vacuole;GO:0009409//response to cold;GO:0002238//response to molecule of fungal origin","-","GO:0005737//cytoplasm;GO:0005886//plasma membrane"]
[378,"CSE_CL5883_Contig2","SW_Unigene20160","-","-","+(Mostly)",1884,{"v":0.989,"d":"98.90%"},20,8,12,{"v":0.568033,"d":"0.568"},{"v":0.213714,"d":"0.2137"},"gi|359477163|ref|XP_002271327.2|","PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera] >gi|296083309|emb|CBI22945.3| unnamed protein product [Vitis vinifera]","gi|359477162|ref|XM_002271291.2|","PREDICTED: Vitis vinifera WD repeat-containing protein 43-like (LOC100251740), mRNA","-","-","COG2319","FOG: WD40 repeat","K14546","vvi:100251740","U3 small nucleolar RNA-associated protein 5","GO:0009909//regulation of flower development;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0000478//endonucleolytic cleavage involved in rRNA processing","GO:0000166//nucleotide binding","GO:0005634//nucleus"]
[379,"CSE_CL4496_Contig1","SW_Unigene22999","-","-","+(Mostly)",696,{"v":0.977,"d":"97.70%"},16,8,8,{"v":0.345556,"d":"0.346"},{"v":0.0336252,"d":"0.0336"},"gi|359478215|ref|XP_002274062.2|","PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplastic-like [Vitis vinifera] >gi|296084250|emb|CBI24638.3| unnamed protein product [Vitis vinifera]","gi|359478214|ref|XM_002274026.2|","PREDICTED: Vitis vinifera probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplastic-like (LOC100259438), mRNA","sp|O22870|FK163_ARATH","Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2","COG0545","FKBP-type peptidyl-prolyl cis-trans isomerases 1","K01802","aly:ARALYDRAFT_483467","peptidylprolyl isomerase [EC:5.2.1.8]","GO:0006098//pentose-phosphate shunt;GO:0006457//protein folding;GO:0010207//photosystem II assembly;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0000413//protein peptidyl-prolyl isomerization;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0005528//FK506 binding;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0016020//membrane;GO:0009570//chloroplast stroma;GO:0009543//chloroplast thylakoid lumen"]
[380,"CSE_CL6058_Contig1","SW_Unigene22088","-","-","+(Mostly)",1995,{"v":0.991,"d":"99.10%"},18,3,15,{"v":1.71884,"d":"1.719"},{"v":0.582381,"d":"0.5824"},"gi|359478275|ref|XP_002274820.2|","PREDICTED: uncharacterized protein LOC100249037 [Vitis vinifera] >gi|296084312|emb|CBI24700.3| unnamed protein product [Vitis vinifera]","gi|359478274|ref|XM_002274784.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249037 (LOC100249037), mRNA","sp|Q9FN48|CAS_ARATH","Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1","-","-","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016117//carotenoid biosynthetic process;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity","-","GO:0009534//chloroplast thylakoid;GO:0005634//nucleus"]
[381,"CSE_CL7408_Contig3","SW_Unigene11047","-","-","+(Mostly)",945,{"v":0.978,"d":"97.80%"},15,{"v":9.83213,"d":"10"},{"v":5.16787,"d":"5"},{"v":0.171039,"d":"0.171"},{"v":0.000728894,"d":"0.0007"},"gi|359478237|ref|XP_002275927.2|","PREDICTED: uncharacterized protein LOC100264576 [Vitis vinifera]","gi|359478236|ref|XM_002275891.2|","PREDICTED: Vitis vinifera uncharacterized LOC100264576 (LOC100264576), mRNA","sp|Q4LDF9|OEP37_PEA","Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1","-","-","-","-","-","GO:0006812//cation transport","GO:0005216//ion channel activity","GO:0031359//integral to chloroplast outer membrane;GO:0005634//nucleus;GO:0009706//chloroplast inner membrane;GO:0005739//mitochondrion"]
[382,"CSE_Unigene19579","SW_Unigene12028","-","-","+(Mostly)",960,{"v":0.99,"d":"99.00%"},10,5,5,{"v":0.369552,"d":"0.370"},{"v":0.105445,"d":"0.1054"},"gi|225434233|ref|XP_002280271.1|","PREDICTED: probable uridine nucleosidase 2 [Vitis vinifera] >gi|296084370|emb|CBI24758.3| unnamed protein product [Vitis vinifera]","gi|225434232|ref|XM_002280235.1|","PREDICTED: Vitis vinifera probable uridine nucleosidase 2-like (LOC100254160), mRNA","sp|Q8LAC4|URH2_ARATH","Probable uridine nucleosidase 2 OS=Arabidopsis thaliana GN=URH2 PE=2 SV=1","COG1957","Inosine-uridine nucleoside N-ribohydrolase","K01240","ppp:PHYPADRAFT_137777","uridine nucleosidase [EC:3.2.2.3]","GO:0006148//inosine catabolic process;GO:0010150//leaf senescence","GO:0035251//UDP-glucosyltransferase activity;GO:0047724//inosine nucleosidase activity","GO:0005829//cytosol"]
[383,"CSE_Unigene19608","SW_Unigene15212","-","-","+(Mostly)",2166,{"v":0.997,"d":"99.70%"},7,4,3,{"v":0.257211,"d":"0.257"},{"v":0.0760601,"d":"0.0761"},"gi|297745732|emb|CBI15788.3|","unnamed protein product [Vitis vinifera]","gi|225434290|ref|XM_002275824.1|","PREDICTED: Vitis vinifera MAU2 chromatid cohesion factor homolog (LOC100253529), mRNA","-","-","-","-","K11266","vvi:100253529","MAternally affected uncoordination","GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0006487//protein N-linked glycosylation","-","GO:0005634//nucleus"]
[384,"CSE_CL4530_Contig1","SW_Unigene15417","-","-","+(Mostly)",1446,{"v":0.989,"d":"98.90%"},16,8,8,{"v":0.305958,"d":"0.306"},{"v":0.0193404,"d":"0.0193"},"gi|359478497|ref|XP_002276707.2|","PREDICTED: uncharacterized protein LOC100255308 [Vitis vinifera]","gi|359478496|ref|XM_002276671.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255308 (LOC100255308), mRNA","sp|O81004|Y2287_ARATH","GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2","COG0218","Predicted GTPase","K03978","ppp:PHYPADRAFT_148111","GTP-binding protein","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0000917//barrier septum assembly","GO:0005525//GTP binding","GO:0009507//chloroplast"]
[385,"CSE_Unigene1954","SW_Unigene17736","-","-","+(Mostly)",1158,{"v":0.988,"d":"98.80%"},14,11,3,{"v":0.0916249,"d":"0.092"},{"v":4.70885e-05,"d":"0.0000"},"gi|225434449|ref|XP_002277781.1|","PREDICTED: uncharacterized protein At1g18480 [Vitis vinifera] >gi|297745819|emb|CBI15875.3| unnamed protein product [Vitis vinifera]","gi|225434448|ref|XM_002277745.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262041 (LOC100262041), mRNA","sp|Q944L7|Y1480_ARATH","Uncharacterized protein At1g18480 OS=Arabidopsis thaliana GN=At1g18480 PE=2 SV=1","COG0639","Diadenosine tetraphosphatase and related serine/threonine protein phosphatases","-","-","-","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0042545//cell wall modification;GO:0043086//negative regulation of catalytic activity;GO:0045490//pectin catabolic process","GO:0045330;GO:0030599//pectinesterase activity;GO:0004857//enzyme inhibitor activity;GO:0004722//protein serine/threonine phosphatase activity","GO:0005618//cell wall;GO:0005777//peroxisome;GO:0009507//chloroplast"]
[386,"CSE_Unigene13618","SW_Unigene22069","-","-","+(Mostly)",1005,{"v":0.988,"d":"98.80%"},9,5,4,{"v":0.248964,"d":"0.249"},{"v":0.0403463,"d":"0.0403"},"gi|225434524|ref|XP_002276231.1|","PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera] >gi|297745865|emb|CBI15921.3| unnamed protein product [Vitis vinifera]","gi|359478769|ref|XM_002276195.2|","PREDICTED: Vitis vinifera zinc transporter 6, chloroplastic-like (LOC100250102), mRNA","sp|O64738|ZIP6_ARATH","Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1","COG0428","Predicted divalent heavy-metal cations transporter","K14709","bdi:100827984","solute carrier family 39 (zinc transporter), member 1/2/3","GO:0009624//response to nematode;GO:0071577//zinc ion transmembrane transport;GO:0055114//oxidation-reduction process","GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0008270//zinc ion binding;GO:0005385//zinc ion transmembrane transporter activity","GO:0005886//plasma membrane;GO:0016021//integral to membrane"]
[387,"CSE_Unigene10484","SW_Unigene21350","-","-","+(Mostly)",546,{"v":0.991,"d":"99.10%"},5,3,2,{"v":0.174482,"d":"0.174"},{"v":0.00739797,"d":"0.0074"},"gi|297745938|emb|CBI15994.3|","unnamed protein product [Vitis vinifera]","gi|359478567|ref|XM_002279668.2|","PREDICTED: Vitis vinifera josephin-like protein-like (LOC100243268), mRNA","sp|O82391|JOSL_ARATH","Josephin-like protein OS=Arabidopsis thaliana GN=At2g29640 PE=2 SV=1","-","-","K15235","vvi:100243268","josephin [EC:3.4.19.12]","-","GO:0008242//omega peptidase activity","GO:0005634//nucleus"]
[388,"CSE_CL6669_Contig2","SW_CL2820_Contig2","-","-","+(Mostly)",1422,{"v":0.997,"d":"99.70%"},4,3,1,{"v":0.0986848,"d":"0.099"},{"v":0.0370214,"d":"0.0370"},"gi|225434716|ref|XP_002281136.1|","PREDICTED: cytosolic enolase 3-like [Vitis vinifera]","gi|359478884|ref|XM_002281100.2|","PREDICTED: Vitis vinifera cytosolic enolase 3-like (LOC100265663), mRNA","sp|Q9ZW34|ENO3_ARATH","Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=2 SV=1","COG0148","Enolase","K01689","vvi:100265663","enolase [EC:4.2.1.11]","GO:0006096//glycolysis","GO:0004634//phosphopyruvate hydratase activity;GO:0000287//magnesium ion binding","GO:0000015//phosphopyruvate hydratase complex;GO:0005634//nucleus"]
[389,"CSE_CL5609_Contig2","SW_CL2011_Contig1","-","-","+(Mostly)",834,{"v":0.989,"d":"98.90%"},9,5,4,{"v":0.227665,"d":"0.228"},{"v":0.0305338,"d":"0.0305"},"gi|225434865|ref|XP_002282911.1|","PREDICTED: chaperone protein DnaJ isoform 2 [Vitis vinifera] >gi|297746036|emb|CBI16092.3| unnamed protein product [Vitis vinifera]","gi|225434864|ref|XM_002282875.1|","PREDICTED: Vitis vinifera chaperone protein DnaJ-like, transcript variant 2 (LOC100258713), mRNA","sp|Q9SDN0|DNJ20_ARATH","Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K03686","mtr:MTR_3g087030","molecular chaperone DnaJ","GO:0006457//protein folding","GO:0005515//protein binding","GO:0009507//chloroplast"]
[390,"CSE_Unigene11269","SW_Unigene25448","-","-","+(Mostly)",1521,{"v":0.995,"d":"99.50%"},7,4,3,{"v":0.227459,"d":"0.227"},{"v":0.0562974,"d":"0.0563"},"gi|225435038|ref|XP_002281336.1|","PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Vitis vinifera]","gi|123656813|emb|AM455359.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X061798.12, clone ENTAV 115","sp|Q9LVQ5|PP432_ARATH","Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[391,"CSE_Unigene410","SW_Unigene6106","-","-","+(Mostly)",525,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.317326,"d":"0.317"},{"v":0,"d":"0.0000"},"gi|297746214|emb|CBI16270.3|","unnamed protein product [Vitis vinifera]","gi|225435223|ref|XM_002282079.1|","PREDICTED: Vitis vinifera uncharacterized LOC100253475 (LOC100253475), mRNA","sp|Q9FJI1|AAK6_ARATH","Adenylate kinase isoenzyme 6 OS=Arabidopsis thaliana GN=AAK6 PE=1 SV=1","COG1936","Predicted nucleotide kinase (related to CMP and AMP kinases)","K14535","vvi:100253475","transcription initiation factor TFIID subunit 9 / adenylate kinase [EC:2.7.4.3]","GO:0016310//phosphorylation","GO:0016301//kinase activity","-"]
[392,"CSE_Unigene12745","SW_Unigene15819","-","-","+(Mostly)",978,{"v":0.992,"d":"99.20%"},8,4,4,{"v":0.234529,"d":"0.235"},{"v":0.0483299,"d":"0.0483"},"gi|147780726|emb|CAN60322.1|","hypothetical protein VITISV_002856 [Vitis vinifera]","gi|359479042|ref|XM_002284882.2|","PREDICTED: Vitis vinifera probable exonuclease V-like (LOC100244936), mRNA","sp|Q9FKK6|EXO5_ARATH","Exonuclease V, chloroplastic OS=Arabidopsis thaliana GN=At5g60370 PE=2 SV=1","-","-","-","-","-","-","-","-"]
[393,"CSE_Unigene17203","SW_Unigene22456","-","-","+(Mostly)",1329,{"v":0.998,"d":"99.80%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225435468|ref|XP_002285479.1|","PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Vitis vinifera]","gi|225435467|ref|XM_002285443.1|","PREDICTED: Vitis vinifera uncharacterized LOC100243203, transcript variant 1 (LOC100243203), mRNA","sp|Q8VXZ9|R47BP_ARATH","Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana GN=RBP47B' PE=2 SV=1","COG0724","RNA-binding proteins (RRM domain)","K13201","smo:SELMODRAFT_44478","nucleolysin TIA-1/TIAR","-","GO:0003676//nucleic acid binding;GO:0000166//nucleotide binding","GO:0005739//mitochondrion"]
[394,"CSE_CL6871_Contig1","SW_CL1366_Contig1","-","-","+(Mostly)",4101,{"v":0.992,"d":"99.20%"},31,14,17,{"v":0.405745,"d":"0.406"},{"v":0.0196861,"d":"0.0197"},"gi|225435470|ref|XP_002285473.1|","PREDICTED: xanthine dehydrogenase/oxidase-like isoform 1 [Vitis vinifera]","gi|225435469|ref|XM_002285437.1|","PREDICTED: Vitis vinifera xanthine dehydrogenase/oxidase-like, transcript variant 1 (LOC100248547), mRNA","sp|Q8GUQ8|XDH1_ARATH","Xanthine dehydrogenase 1 OS=Arabidopsis thaliana GN=XDH1 PE=1 SV=1","COG4631","Xanthine dehydrogenase, molybdopterin-binding subunit B","K00106","vvi:100248547","xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]","GO:0055114//oxidation-reduction process;GO:0009414//response to water deprivation;GO:0000302//response to reactive oxygen species;GO:0006145//purine nucleobase catabolic process;GO:0042554//superoxide anion generation;GO:0046110//xanthine metabolic process","GO:0051537//2 iron, 2 sulfur cluster binding;GO:0009055//electron carrier activity;GO:0004855//xanthine oxidase activity;GO:0004854//xanthine dehydrogenase activity;GO:0050660//flavin adenine dinucleotide binding;GO:0008762//UDP-N-acetylmuramate dehydrogenase activity;GO:0005506//iron ion binding","GO:0005829//cytosol"]
[395,"CSE_Unigene14578","SW_Unigene11479","-","-","+(Mostly)",1185,{"v":0.992,"d":"99.20%"},6,4,2,{"v":0.154668,"d":"0.155"},{"v":0.030967,"d":"0.0310"},"gi|225435622|ref|XP_002283329.1|","PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Vitis vinifera] >gi|297746405|emb|CBI16461.3| unnamed protein product [Vitis vinifera]","gi|225435621|ref|XM_002283293.1|","PREDICTED: Vitis vinifera probable plastid-lipid-associated protein 12, chloroplastic-like (LOC100257060), mRNA","sp|Q8LAP6|PAP12_ARATH","Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1","-","-","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0010027//thylakoid membrane organization","GO:0005198//structural molecule activity","GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane"]
[396,"CSE_Unigene17206","SW_Unigene21463","-","-","+(Mostly)",1611,{"v":0.987,"d":"98.70%"},21,7,14,{"v":0.676532,"d":"0.677"},{"v":0.446304,"d":"0.4463"},"gi|225436442|ref|XP_002274210.1|","PREDICTED: pheophorbide a oxygenase, chloroplastic [Vitis vinifera] >gi|297734893|emb|CBI17127.3| unnamed protein product [Vitis vinifera]","gi|359479334|ref|XM_002274174.2|","PREDICTED: Vitis vinifera pheophorbide a oxygenase, chloroplastic-like (LOC100256831), mRNA","sp|Q9FYC2|PAO_ARATH","Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1","COG4638","Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit","K13071","vvi:100256831","pheophorbide a oxygenase [EC:1.14.12.20]","GO:0042744//hydrogen peroxide catabolic process;GO:0009793//embryo development ending in seed dormancy;GO:0009965//leaf morphogenesis;GO:0048481//ovule development;GO:0019761//glucosinolate biosynthetic process;GO:0009693//ethylene biosynthetic process;GO:0032880//regulation of protein localization;GO:0006096//glycolysis;GO:0009816//defense response to bacterium, incompatible interaction;GO:0015996//chlorophyll catabolic process;GO:0009651//response to salt stress;GO:0022900//electron transport chain;GO:0010027//thylakoid membrane organization;GO:0019447//D-cysteine catabolic process;GO:0016226//iron-sulfur cluster assembly;GO:0008219//cell death;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0030154//cell differentiation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0046686//response to cadmium ion;GO:0006094//gluconeogenesis;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0032441//pheophorbide a oxygenase activity;GO:0016630//protochlorophyllide reductase activity;GO:0050897//cobalt ion binding;GO:0010277//chlorophyllide a oxygenase [overall] activity;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0008660//1-aminocyclopropane-1-carboxylate deaminase activity;GO:0019148//D-cysteine desulfhydrase activity","GO:0005829//cytosol;GO:0009706//chloroplast inner membrane;GO:0005739//mitochondrion;GO:0009534//chloroplast thylakoid"]
[397,"CSE_Unigene14838","SW_Unigene16508","-","-","+(Mostly)",1644,{"v":0.993,"d":"99.30%"},11,3,8,{"v":0.695223,"d":"0.695"},{"v":0.629773,"d":"0.6298"},"gi|225436498|ref|XP_002276131.1|","PREDICTED: alpha-L-fucosidase 1 [Vitis vinifera]","gi|359479351|ref|XM_002276095.2|","PREDICTED: Vitis vinifera alpha-L-fucosidase 1-like (LOC100255173), mRNA","sp|Q8GW72|FUCO1_ARATH","Alpha-L-fucosidase 1 OS=Arabidopsis thaliana GN=FUC1 PE=1 SV=2","COG3669","Alpha-L-fucosidase","K01206","vvi:100255173","alpha-L-fucosidase [EC:3.2.1.51]","GO:0005975//carbohydrate metabolic process;GO:0006516//glycoprotein catabolic process","GO:0043169//cation binding;GO:0004560//alpha-L-fucosidase activity","GO:0005773//vacuole;GO:0005576//extracellular region"]
[398,"CSE_Unigene11179","SW_Unigene11343","-","-","+(Mostly)",573,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225436504|ref|XP_002276276.1|","PREDICTED: lactoylglutathione lyase isoform 1 [Vitis vinifera] >gi|297734925|emb|CBI17159.3| unnamed protein product [Vitis vinifera]","gi|359479354|ref|XM_002276240.2|","PREDICTED: Vitis vinifera lactoylglutathione lyase-like, transcript variant 1 (LOC100244888), mRNA","sp|Q9ZS21|LGUL_SOYBN","Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1","COG0346","Lactoylglutathione lyase and related lyases","K01759","vvi:100244888","lactoylglutathione lyase [EC:4.4.1.5]","GO:0006094//gluconeogenesis;GO:0046686//response to cadmium ion;GO:0006096//glycolysis;GO:0009651//response to salt stress","GO:0046872//metal ion binding;GO:0004462//lactoylglutathione lyase activity;GO:0005516//calmodulin binding","GO:0009507//chloroplast;GO:0005829//cytosol"]
[399,"CSE_Unigene15986","SW_CL6992_Contig1","-","-","+(Mostly)",1692,{"v":0.992,"d":"99.20%"},13,6,7,{"v":0.414039,"d":"0.414"},{"v":0.0983569,"d":"0.0984"},"gi|225436520|ref|XP_002273662.1|","PREDICTED: dolichol kinase [Vitis vinifera] >gi|297734932|emb|CBI17166.3| unnamed protein product [Vitis vinifera]","gi|225436519|ref|XM_002273626.1|","PREDICTED: Vitis vinifera dolichol kinase-like (LOC100261999), mRNA","-","-","COG0170","Dolichol kinase","K00902","vvi:100261999","dolichol kinase [EC:2.7.1.108]","GO:0031348//negative regulation of defense response;GO:0045087//innate immune response;GO:0010200//response to chitin;GO:0006944//cellular membrane fusion;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009863//salicylic acid mediated signaling pathway;GO:0008654//phospholipid biosynthetic process;GO:0009697//salicylic acid biosynthetic process","GO:0004168//dolichol kinase activity;GO:0004605//phosphatidate cytidylyltransferase activity","GO:0016021//integral to membrane"]
[400,"CSE_Unigene18859","SW_Unigene22416","-","-","+(Mostly)",2232,{"v":0.996,"d":"99.60%"},10,8,2,{"v":0.0847495,"d":"0.085"},{"v":0.000468705,"d":"0.0005"},"gi|255544946|ref|XP_002513534.1|","Magnesium-chelatase subunit chlD, chloroplast precursor, putative [Ricinus communis] >gi|223547442|gb|EEF48937.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative [Ricinus communis]","gi|349722878|emb|FQ393213.1|","Vitis vinifera clone SS0AFA2YC06","sp|O24133|CHLD_TOBAC","Magnesium-chelatase subunit ChlD, chloroplastic OS=Nicotiana tabacum GN=CHLD PE=2 SV=1","COG1240","Mg-chelatase subunit ChlD","K03404","vvi:100243048","magnesium chelatase subunit D [EC:6.6.1.1]","GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015995//chlorophyll biosynthetic process;GO:0015979//photosynthesis;GO:0009690//cytokinin metabolic process","GO:0017111//nucleoside-triphosphatase activity;GO:0016851//magnesium chelatase activity;GO:0005524//ATP binding","GO:0010007//magnesium chelatase complex;GO:0009534//chloroplast thylakoid;GO:0009570//chloroplast stroma"]
[401,"CSE_Unigene9614","SW_Unigene14560","-","-","+(Mostly)",894,{"v":0.991,"d":"99.10%"},8,5,3,{"v":0.192264,"d":"0.192"},{"v":0.0244977,"d":"0.0245"},"gi|225464820|ref|XP_002270105.1|","PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis vinifera] >gi|296084850|emb|CBI28259.3| unnamed protein product [Vitis vinifera]","gi|225464819|ref|XM_002270069.1|","PREDICTED: Vitis vinifera probable receptor-like protein kinase At1g49730 (LOC100262216), mRNA","sp|Q9FX99|Y1497_ARATH","Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K04733","smo:SELMODRAFT_159261","interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]","GO:0006468//protein phosphorylation","GO:0004672//protein kinase activity;GO:0005524//ATP binding","GO:0005886//plasma membrane;GO:0005739//mitochondrion"]
[402,"CSE_Unigene13132","SW_Unigene13913","-","-","+(Mostly)",594,{"v":0.988,"d":"98.80%"},7,1,6,{"v":2.41286,"d":"2.413"},{"v":0.585599,"d":"0.5856"},"gi|225464842|ref|XP_002271410.1|","PREDICTED: transmembrane protein C20orf108 [Vitis vinifera] >gi|296084861|emb|CBI28270.3| unnamed protein product [Vitis vinifera]","gi|225464841|ref|XM_002271374.1|","PREDICTED: Vitis vinifera transmembrane protein C20orf108-like (LOC100258627), mRNA","-","-","-","-","-","-","-","GO:0009965//leaf morphogenesis;GO:0006661//phosphatidylinositol biosynthetic process;GO:0030154//cell differentiation;GO:0045893//positive regulation of transcription, DNA-dependent","-","GO:0016021//integral to membrane;GO:0009535//chloroplast thylakoid membrane"]
[403,"CSE_Unigene12869","SW_Unigene22215","-","-","+(Mostly)",879,{"v":0.994,"d":"99.40%"},5,4,1,{"v":0.0977626,"d":"0.098"},{"v":0.0228611,"d":"0.0229"},"gi|296084900|emb|CBI28309.3|","unnamed protein product [Vitis vinifera]","gi|359479502|ref|XM_002274877.2|","PREDICTED: Vitis vinifera N-carbamoylputrescine amidase-like (LOC100260445), mRNA","sp|Q3HVN1|AGUB_SOLTU","N-carbamoylputrescine amidase OS=Solanum tuberosum GN=CPA PE=2 SV=1","COG0388","Predicted amidohydrolase","K12251","vvi:100260445","N-carbamoylputrescine amidase [EC:3.5.1.53]","GO:0033388//putrescine biosynthetic process from arginine","GO:0050126//N-carbamoylputrescine amidase activity","-"]
[404,"CSE_Unigene17386","SW_Unigene6892","-","-","+(Mostly)",1140,{"v":0.995,"d":"99.50%"},6,3,3,{"v":0.343346,"d":"0.343"},{"v":0.178974,"d":"0.1790"},"gi|147865290|emb|CAN79825.1|","hypothetical protein VITISV_025116 [Vitis vinifera]","gi|225464987|ref|XM_002277201.1|","PREDICTED: Vitis vinifera histone deacetylase 8-like (LOC100255252), mRNA","sp|Q94EJ2|HDA8_ARATH","Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1","COG0123","Deacetylases, including yeast histone deacetylase and acetoin utilization protein","K11407","ath:AT5G61060","histone deacetylase 6/10 [EC:3.5.1.98]","GO:0016575//histone deacetylation","GO:0004407//histone deacetylase activity","GO:0005634//nucleus"]
[405,"CSE_Unigene10010","SW_Unigene11152","-","-","+(Mostly)",516,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.131835,"d":"0.132"},{"v":0.104497,"d":"0.1045"},"gi|225436658|ref|XP_002276327.1|","PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like [Vitis vinifera]","gi|225436657|ref|XM_002276291.1|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At4g28010-like (LOC100263764), mRNA","sp|Q9SUD8|PP340_ARATH","Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0048451//petal formation;GO:0048453//sepal formation","-","GO:0005739//mitochondrion"]
[406,"CSE_Unigene15009","SW_CL2204_Contig3","-","-","+(Mostly)",888,{"v":0.988,"d":"98.80%"},11,3,8,{"v":0.840733,"d":"0.841"},{"v":0.683484,"d":"0.6835"},"gi|225436662|ref|XP_002276538.1|","PREDICTED: UPF0176 protein Pput_3956 [Vitis vinifera] >gi|296083867|emb|CBI24255.3| unnamed protein product [Vitis vinifera]","gi|359479310|ref|XM_002276502.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244760 (LOC100244760), mRNA","sp|Q93WI0|STR12_ARATH","Rhodanese-like/PpiC domain-containing protein 12 OS=Arabidopsis thaliana GN=At5g19370 PE=2 SV=1","COG0607","Rhodanese-related sulfurtransferase","K09579","ppp:PHYPADRAFT_194479","peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [EC:5.2.1.8]","-","GO:0016853//isomerase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[407,"CSE_Unigene1629","SW_Unigene1249","-","-","+(Mostly)",1218,{"v":0.989,"d":"98.90%"},14,9,5,{"v":0.20484,"d":"0.205"},{"v":0.00400608,"d":"0.0040"},"gi|296083931|emb|CBI24319.3|","unnamed protein product [Vitis vinifera]","gi|359479161|ref|XM_002268300.2|","PREDICTED: Vitis vinifera nucleolar complex protein 2 homolog-like (LOC100247894), mRNA","sp|Q9ZPV5|NOC2L_ARATH","Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana GN=At2g18220 PE=2 SV=2","COG5604","Uncharacterized conserved protein","K14833","vvi:100247894","nucleolar complex protein 2","GO:0006979//response to oxidative stress;GO:0055114//oxidation-reduction process;GO:0042991//transcription factor import into nucleus;GO:0009220//pyrimidine ribonucleotide biosynthetic process","GO:0046872//metal ion binding;GO:0004601//peroxidase activity;GO:0020037//heme binding","GO:0005829//cytosol;GO:0005634//nucleus"]
[408,"CSE_Unigene601","SW_CL5140_Contig1","-","-","+(Mostly)",1173,{"v":0.99,"d":"99.00%"},12,4,8,{"v":0.962004,"d":"0.962"},{"v":0.991222,"d":"0.9912"},"gi|225436102|ref|XP_002278088.1|","PREDICTED: adipocyte plasma membrane-associated protein-like isoform 1 [Vitis vinifera]","gi|349716067|emb|FQ392074.1|","Vitis vinifera clone SS0AFA7YJ14","sp|P94111|STS1_ARATH","Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2","COG3386","Gluconolactonase","K10754","gmx:100790070","replication factor C subunit 1","GO:0009821//alkaloid biosynthetic process","GO:0016844//strictosidine synthase activity","GO:0005886//plasma membrane;GO:0005774//vacuolar membrane;GO:0005576//extracellular region;GO:0009507//chloroplast;GO:0005783//endoplasmic reticulum"]
[409,"CSE_Unigene14692","SW_Unigene3982","-","-","+(Mostly)",927,{"v":0.997,"d":"99.70%"},3,2,1,{"v":0.169823,"d":"0.170"},{"v":0.144682,"d":"0.1447"},"gi|225438978|ref|XP_002284329.1|","PREDICTED: UPF0553 protein [Vitis vinifera] >gi|147768860|emb|CAN78136.1| hypothetical protein VITISV_034055 [Vitis vinifera]","gi|225438977|ref|XM_002284293.1|","PREDICTED: Vitis vinifera uncharacterized LOC100267891 (LOC100267891), mRNA","-","-","-","-","-","-","-","-","-","-"]
[410,"CSE_Unigene15601","SW_CL8467_Contig2","-","-","+(Mostly)",942,{"v":0.988,"d":"98.80%"},11,5,6,{"v":0.403714,"d":"0.404"},{"v":0.119813,"d":"0.1198"},"gi|225437219|ref|XP_002281875.1|","PREDICTED: putative uridine kinase C227.14 [Vitis vinifera] >gi|297735493|emb|CBI17933.3| unnamed protein product [Vitis vinifera]","gi|147770148|emb|AM451676.2|","Vitis vinifera contig VV78X194399.8, whole genome shotgun sequence","-","-","COG1072","Panthothenate kinase","-","-","-","GO:0006222//UMP biosynthetic process;GO:0016310//phosphorylation","GO:0004849//uridine kinase activity;GO:0016773//phosphotransferase activity, alcohol group as acceptor;GO:0005524//ATP binding","GO:0009507//chloroplast"]
[411,"CSE_Unigene13394","SW_CL7773_Contig2","-","-","+(Mostly)",960,{"v":0.991,"d":"99.10%"},9,4,5,{"v":0.3798,"d":"0.380"},{"v":0.13761,"d":"0.1376"},"gi|147777913|emb|CAN75726.1|","hypothetical protein VITISV_031406 [Vitis vinifera]","gi|225437265|ref|XM_002282413.1|","PREDICTED: Vitis vinifera iron-sulfur protein NUBPL-like (LOC100242483), mRNA","sp|Q9MBA2|MIND1_ARATH","Putative septum site-determining protein minD homolog, chloroplastic OS=Arabidopsis thaliana GN=MIND1 PE=1 SV=1","COG0489","ATPases involved in chromosome partitioning","K03593","vvi:100242483","ATP-binding protein involved in chromosome partitioning","-","GO:0005524//ATP binding;GO:0017111//nucleoside-triphosphatase activity","GO:0005739//mitochondrion"]
[412,"CSE_CL3213_Contig1","SW_CL3989_Contig2","-","-","+(Mostly)",822,{"v":0.998,"d":"99.80%"},2,1,1,{"v":0.316133,"d":"0.316"},{"v":0.365889,"d":"0.3659"},"gi|296085196|emb|CBI28691.3|","unnamed protein product [Vitis vinifera]","gi|359479679|ref|XM_002272612.2|","PREDICTED: Vitis vinifera ribosome-recycling factor, chloroplastic-like (LOC100263214), mRNA","sp|P82231|RRFC_SPIOL","Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea GN=RRF PE=1 SV=1","COG0233","Ribosome recycling factor","K02838","vvi:100263214","ribosome recycling factor","GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0042742//defense response to bacterium;GO:0016226//iron-sulfur cluster assembly;GO:0009790//embryo development;GO:0009658//chloroplast organization;GO:0009817//defense response to fungus, incompatible interaction;GO:0032544//plastid translation;GO:0009073//aromatic amino acid family biosynthetic process;GO:0019408//dolichol biosynthetic process;GO:0010027//thylakoid membrane organization","GO:0005507//copper ion binding","GO:0009570//chloroplast stroma;GO:0009579//thylakoid"]
[413,"CSE_Unigene13131","SW_Unigene8460","-","-","+(Mostly)",522,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225437024|ref|XP_002278246.1|","PREDICTED: N-alpha-acetyltransferase 20 [Vitis vinifera] >gi|296085201|emb|CBI28696.3| unnamed protein product [Vitis vinifera]","gi|225437023|ref|XM_002278210.1|","PREDICTED: Vitis vinifera N-alpha-acetyltransferase 20-like (LOC100252851), mRNA","-","-","COG0456","Acetyltransferases","K00670","vvi:100252851","peptide alpha-N-acetyltransferase [EC:2.3.1.88]","GO:0006633//fatty acid biosynthetic process;GO:0002213//defense response to insect;GO:0001676//long-chain fatty acid metabolic process","GO:0004596//peptide alpha-N-acetyltransferase activity","-"]
[414,"CSE_Unigene9573","SW_Unigene24385","-","-","+(Mostly)",1116,{"v":0.992,"d":"99.20%"},9,5,4,{"v":0.319842,"d":"0.320"},{"v":0.0833655,"d":"0.0834"},"gi|359480419|ref|XP_003632456.1|","PREDICTED: GDSL esterase/lipase At2g23540-like isoform 1 [Vitis vinifera] >gi|297745686|emb|CBI40971.3| unnamed protein product [Vitis vinifera]","gi|359480418|ref|XM_003632408.1|","PREDICTED: Vitis vinifera GDSL esterase/lipase At2g23540-like, transcript variant 1 (LOC100855319), mRNA","sp|O80470|GDL38_ARATH","GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1","COG3240","Phospholipase/lecithinase/hemolysin","K01206","ath:AT1G67830","alpha-L-fucosidase [EC:3.2.1.51]","GO:0006629//lipid metabolic process","GO:0004091//carboxylesterase activity","GO:0005576//extracellular region;GO:0016023//cytoplasmic membrane-bounded vesicle"]
[415,"CSE_Unigene19116","SW_Unigene20191","-","-","+(Mostly)",1125,{"v":0.991,"d":"99.10%"},10,7,3,{"v":0.13357,"d":"0.134"},{"v":0.00269829,"d":"0.0027"},"gi|225436783|ref|XP_002268490.1|","PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform 1 [Vitis vinifera]","gi|349719065|emb|FQ392590.1|","Vitis vinifera clone SS0AFA5YB03","sp|O82256|COL13_ARATH","Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1","-","-","K12135","aly:ARALYDRAFT_488429","zinc finger protein CONSTANS","GO:0009805//coumarin biosynthetic process;GO:0006355//regulation of transcription, DNA-dependent;GO:0009611//response to wounding;GO:0009963//positive regulation of flavonoid biosynthetic process","-","GO:0043231//intracellular membrane-bounded organelle"]
[416,"CSE_Unigene15472","SW_Unigene10938","-","-","+(Mostly)",1584,{"v":0.996,"d":"99.60%"},7,4,3,{"v":0.241893,"d":"0.242"},{"v":0.0654504,"d":"0.0655"},"gi|225436831|ref|XP_002270535.1|","PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Vitis vinifera]","gi|147777088|emb|AM456886.2|","Vitis vinifera contig VV78X038090.14, whole genome shotgun sequence","sp|Q9C827|COB22_ARATH","Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1","COG2319","FOG: WD40 repeat","K14549","vvi:100264761","U3 small nucleolar RNA-associated protein 15","GO:0009560//embryo sac egg cell differentiation;GO:0000741//karyogamy;GO:0006364//rRNA processing","GO:0000166//nucleotide binding","GO:0005730//nucleolus;GO:0009536//plastid;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[417,"CSE_Unigene18758","SW_Unigene18701","-","-","+(Mostly)",1581,{"v":0.992,"d":"99.20%"},13,5,8,{"v":0.530471,"d":"0.530"},{"v":0.307342,"d":"0.3073"},"gi|225436880|ref|XP_002273388.1|","PREDICTED: uncharacterized protein LOC100249461 [Vitis vinifera]","gi|359479786|ref|XM_002273352.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249461 (LOC100249461), mRNA","-","-","-","-","K15032","ppp:PHYPADRAFT_161831","mTERF domain-containing protein, mitochondrial","GO:0009790//embryo development;GO:0008380//RNA splicing;GO:0042794//rRNA transcription from plastid promoter","-","GO:0009536//plastid;GO:0005739//mitochondrion"]
[418,"CSE_Unigene13197","SW_Unigene13378","-","-","+(Mostly)",546,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|296086682|emb|CBI32317.3|","unnamed protein product [Vitis vinifera]","gi|225436881|ref|XM_002273411.1|","PREDICTED: Vitis vinifera auxin-binding protein 1 (ABP1), mRNA","sp|P33490|ABP1_TOBAC","Auxin-binding protein T85 OS=Nicotiana tabacum GN=T85 PE=3 SV=1","-","-","-","-","-","GO:0032877//positive regulation of DNA endoreduplication;GO:0055114//oxidation-reduction process;GO:0000910//cytokinesis;GO:0045793//positive regulation of cell size;GO:0051781//positive regulation of cell division;GO:0009826//unidimensional cell growth","GO:0004872//receptor activity;GO:0010011//auxin binding;GO:0032440//2-alkenal reductase [NAD(P)] activity","GO:0005788//endoplasmic reticulum lumen"]
[419,"CSE_Unigene17268","SW_Unigene7350","-","-","+(Mostly)",1983,{"v":0.986,"d":"98.60%"},28,15,13,{"v":0.290372,"d":"0.290"},{"v":0.00125362,"d":"0.0013"},"gi|225436888|ref|XP_002273727.1|","PREDICTED: GPI transamidase component PIG-T-like isoform 2 [Vitis vinifera]","gi|225436885|ref|XM_002273660.1|","PREDICTED: Vitis vinifera GPI transamidase component PIG-T-like, transcript variant 1 (LOC100257996), mRNA","-","-","-","-","K05292","vvi:100257996","phosphatidylinositol glycan, class T","GO:0016255//attachment of GPI anchor to protein;GO:0042732//D-xylose metabolic process","GO:0003923//GPI-anchor transamidase activity","GO:0042765//GPI-anchor transamidase complex;GO:0009507//chloroplast"]
[420,"CSE_Unigene13969","SW_Unigene12917","-","-","+(Mostly)",1035,{"v":0.995,"d":"99.50%"},5,4,1,{"v":0.0857703,"d":"0.086"},{"v":0.0160391,"d":"0.0160"},"gi|225436896|ref|XP_002274008.1|","PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1 [Vitis vinifera] >gi|296086688|emb|CBI32323.3| unnamed protein product [Vitis vinifera]","gi|359479788|ref|XM_002273972.2|","PREDICTED: Vitis vinifera mitochondrial ubiquitin ligase activator of nfkb 1-like (LOC100247743), mRNA","-","-","-","-","K15688","vvi:100247743","E3 ubiquitin-protein ligase MUL1 [EC:6.3.2.19]","GO:0009658//chloroplast organization;GO:0045037//protein import into chloroplast stroma","GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein ligase activity","GO:0005739//mitochondrion;GO:0009941//chloroplast envelope"]
[421,"CSE_Unigene15199","SW_Unigene16440","-","-","+(Mostly)",1560,{"v":0.994,"d":"99.40%"},9,7,2,{"v":0.0930113,"d":"0.093"},{"v":0.0012412,"d":"0.0012"},"gi|225438811|ref|XP_002278393.1|","PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]","gi|123716400|emb|AM454724.1|","Vitis vinifera contig VV78X229598.18, whole genome shotgun sequence","sp|Q9SD53|Y3720_ARATH","UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1","-","-","-","-","-","-","-","GO:0005886//plasma membrane"]
[422,"CSE_CL3859_Contig1","SW_CL1411_Contig1","-","-","+(Mostly)",693,{"v":0.996,"d":"99.60%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225438758|ref|XP_002282881.1|","PREDICTED: F-box protein At5g67140 [Vitis vinifera] >gi|296082395|emb|CBI21400.3| unnamed protein product [Vitis vinifera]","gi|225438757|ref|XM_002282845.1|","PREDICTED: Vitis vinifera F-box protein At5g67140-like (LOC100266310), mRNA","sp|Q9FH99|FB302_ARATH","F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1","-","-","K14515","ath:AT2G25490","EIN3-binding F-box protein","-","GO:0016874//ligase activity","GO:0005737//cytoplasm"]
[423,"CSE_Unigene16679","SW_Unigene3869","-","-","+(Mostly)",618,{"v":0.987,"d":"98.70%"},8,6,2,{"v":0.122471,"d":"0.122"},{"v":0.00643616,"d":"0.0064"},"gi|225438635|ref|XP_002281281.1|","PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 4, chloroplastic [Vitis vinifera] >gi|296082462|emb|CBI21467.3| unnamed protein product [Vitis vinifera]","gi|359480696|ref|XM_002281245.2|","PREDICTED: Vitis vinifera probable FKBP-type peptidyl-prolyl cis-trans isomerase 4, chloroplastic-like (LOC100268058), mRNA","sp|Q9SCY3|FK162_ARATH","Peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-2 PE=1 SV=1","COG0545","FKBP-type peptidyl-prolyl cis-trans isomerases 1","K01802","osa:4341766","peptidylprolyl isomerase [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization","GO:0005528//FK506 binding;GO:0005515//protein binding;GO:0031679//NADH dehydrogenase (plastoquinone) activity;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0010598//NAD(P)H dehydrogenase complex (plastoquinone);GO:0009543//chloroplast thylakoid lumen;GO:0005576//extracellular region;GO:0009535//chloroplast thylakoid membrane"]
[424,"CSE_Unigene16737","SW_Unigene15958","-","-","+(Mostly)",1104,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225438553|ref|XP_002279867.1|","PREDICTED: developmentally-regulated GTP-binding protein 1 [Vitis vinifera] >gi|296082507|emb|CBI21512.3| unnamed protein product [Vitis vinifera]","gi|225438552|ref|XM_002279831.1|","PREDICTED: Vitis vinifera developmentally-regulated GTP-binding protein 1-like (LOC100267907), mRNA","sp|Q9LQK0|DRG1_ARATH","Developmentally regulated G-protein 1 OS=Arabidopsis thaliana GN=DRG1 PE=1 SV=1","COG1163","Predicted GTPase","K06944","osa:4343980",null,"GO:0006184//GTP catabolic process","GO:0019003//GDP binding;GO:0003924//GTPase activity;GO:0005525//GTP binding","GO:0005829//cytosol"]
[425,"CSE_Unigene15897","SW_Unigene12358","-","-","+(Mostly)",519,{"v":0.996,"d":"99.60%"},2,"NA",2,"NA","NA","gi|225438531|ref|XP_002279428.1|","PREDICTED: iron-sulfur assembly protein IscA, chloroplastic-like [Vitis vinifera]","gi|225438530|ref|XM_002279392.1|","PREDICTED: Vitis vinifera iron-sulfur assembly protein IscA, chloroplastic-like (LOC100249101), mRNA","sp|Q9XIK3|ISCAP_ARATH","Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2","COG0316","Uncharacterized conserved protein","K13628","vvi:100249101","iron-sulfur cluster assembly protein","GO:0042744//hydrogen peroxide catabolic process;GO:0016226//iron-sulfur cluster assembly","GO:0051536//iron-sulfur cluster binding;GO:0005198//structural molecule activity","GO:0009570//chloroplast stroma"]
[426,"CSE_Unigene657","SW_Unigene22901","-","-","+(Mostly)",942,{"v":0.989,"d":"98.90%"},10,4,6,{"v":0.451315,"d":"0.451"},{"v":0.183862,"d":"0.1839"},"gi|225438525|ref|XP_002275767.1|","PREDICTED: uncharacterized protein LOC100254208 [Vitis vinifera]","gi|225438524|ref|XM_002275731.1|","PREDICTED: Vitis vinifera uncharacterized LOC100254208 (LOC100254208), mRNA","-","-","COG0457","FOG: TPR repeat","-","-","-","-","-","GO:0009536//plastid"]
[427,"CSE_Unigene16627","SW_Unigene23657","-","-","+(Mostly)",693,{"v":0.993,"d":"99.30%"},5,4,1,{"v":0.0932569,"d":"0.093"},{"v":0.0201624,"d":"0.0202"},"gi|225438398|ref|XP_002274735.1|","PREDICTED: psbP domain-containing protein 2, chloroplastic [Vitis vinifera] >gi|296082589|emb|CBI21594.3| unnamed protein product [Vitis vinifera]","gi|225438397|ref|XM_002274699.1|","PREDICTED: Vitis vinifera psbP domain-containing protein 2, chloroplastic-like (LOC100245853), mRNA","sp|Q8VY52|PPD2_ARATH","PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPD2 PE=1 SV=1","-","-","K02717","gmx:100305918","photosystem II oxygen-evolving enhancer protein 2","GO:0009965//leaf morphogenesis;GO:0030154//cell differentiation;GO:0015979//photosynthesis;GO:0045893//positive regulation of transcription, DNA-dependent","GO:0005509//calcium ion binding","GO:0019898//extrinsic to membrane;GO:0009507//chloroplast;GO:0009654//oxygen evolving complex"]
[428,"CSE_Unigene10806","SW_Unigene22509","-","-","+(Mostly)",1794,{"v":0.993,"d":"99.30%"},12,8,4,{"v":0.133489,"d":"0.133"},{"v":0.000867171,"d":"0.0009"},"gi|147807580|emb|CAN77670.1|","hypothetical protein VITISV_024978 [Vitis vinifera]","gi|123708092|emb|AM484471.1|","Vitis vinifera contig VV78X101095.5, whole genome shotgun sequence","sp|Q8RWD6|FB271_ARATH","F-box protein At5g39450 OS=Arabidopsis thaliana GN=At5g39450 PE=2 SV=1","-","-","-","-","-","GO:0055114//oxidation-reduction process;GO:0030328//prenylcysteine catabolic process","GO:0016670//oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","-"]
[429,"CSE_Unigene15394","SW_Unigene7497","-","-","+(Mostly)",1629,{"v":0.994,"d":"99.40%"},9,5,4,{"v":0.276677,"d":"0.277"},{"v":0.0550069,"d":"0.0550"},"gi|359480765|ref|XP_002273522.2|","PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like [Vitis vinifera]","gi|359480764|ref|XM_002273486.2|","PREDICTED: Vitis vinifera NADH dehydrogenase C1, chloroplastic/mitochondrial-like (LOC100264660), mRNA","sp|Q8GXR9|DHNA_ARATH","NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1 PE=1 SV=2","COG1252","NADH dehydrogenase, FAD-containing subunit","K03885","sbi:SORBI_10g007230","NADH dehydrogenase [EC:1.6.99.3]","GO:0071482//cellular response to light stimulus;GO:0042744//hydrogen peroxide catabolic process;GO:0055114//oxidation-reduction process","GO:0050660//flavin adenine dinucleotide binding;GO:0003954//NADH dehydrogenase activity","GO:0005618//cell wall;GO:0031304//intrinsic to mitochondrial inner membrane;GO:0009534//chloroplast thylakoid;GO:0010287//plastoglobule"]
[430,"CSE_Unigene12475","SW_Unigene11362","-","-","+(Mostly)",672,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225438323|ref|XP_002273073.1|","PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera] >gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]","gi|225438322|ref|XM_002273037.1|","PREDICTED: Vitis vinifera E3 ubiquitin-protein ligase HERC2-like (LOC100259340), mRNA","sp|Q9FN03|UVR8_ARATH","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1","COG5184","Alpha-tubulin suppressor and related RCC1 domain-containing proteins","K11493","ota:Ot03g05690","regulator of chromosome condensation","-","GO:0003682//chromatin binding;GO:0008536//Ran GTPase binding","-"]
[431,"CSE_Unigene15027","SW_Unigene944","-","-","+(Mostly)",1569,{"v":0.995,"d":"99.50%"},8,7,1,{"v":0.0519027,"d":"0.052"},{"v":0.000576616,"d":"0.0006"},"gi|359480786|ref|XP_002271927.2|","PREDICTED: ferrochelatase-2, chloroplastic-like [Vitis vinifera]","gi|359480785|ref|XM_002271891.2|","PREDICTED: Vitis vinifera ferrochelatase-2, chloroplastic-like (LOC100254236), mRNA","sp|A2Y3Q5|HEMH_ORYSI","Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2","COG0276","Protoheme ferro-lyase (ferrochelatase)","K01772","vvi:100254236","ferrochelatase [EC:4.99.1.1]","GO:0006783//heme biosynthetic process","GO:0004325//ferrochelatase activity","GO:0009507//chloroplast"]
[432,"CSE_Unigene18681","SW_Unigene15259","-","-","+(Mostly)",1437,{"v":0.989,"d":"98.90%"},15,6,9,{"v":0.381854,"d":"0.382"},{"v":0.0657233,"d":"0.0657"},"gi|359479954|ref|XP_002263128.2|","PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic [Vitis vinifera]","gi|359479953|ref|XM_002263092.2|","PREDICTED: Vitis vinifera c-1-tetrahydrofolate synthase, cytoplasmic-like (LOC100255621), mRNA","-","-","COG0190","5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase","-","-","-","GO:0055114//oxidation-reduction process;GO:0030244//cellulose biosynthetic process;GO:0009396//folic acid-containing compound biosynthetic process;GO:0048193//Golgi vesicle transport;GO:0019344//cysteine biosynthetic process","GO:0004488//methylenetetrahydrofolate dehydrogenase (NADP+) activity;GO:0004477//methenyltetrahydrofolate cyclohydrolase activity;GO:0000166//nucleotide binding","GO:0005829//cytosol;GO:0009507//chloroplast"]
[433,"CSE_Unigene14550","SW_Unigene13161","-","-","+(Mostly)",975,{"v":0.995,"d":"99.50%"},5,5,"NA",{"v":0,"d":"0.000"},"NA","gi|225437370|ref|XP_002269158.1|","PREDICTED: peter Pan-like protein [Vitis vinifera] >gi|297743890|emb|CBI36860.3| unnamed protein product [Vitis vinifera]","gi|359480339|ref|XM_002269122.2|","PREDICTED: Vitis vinifera peter Pan-like protein (LOC100252111), mRNA","sp|Q9ASU7|PPAN_ARATH","Peter Pan-like protein OS=Arabidopsis thaliana GN=PPAN PE=1 SV=1","-","-","K14859","vvi:100252111","ribosome biogenesis protein SSF1/2","-","-","GO:0005634//nucleus"]
[434,"CSE_Unigene16364","SW_Unigene14043","-","-","+(Mostly)",723,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.330653,"d":"0.331"},{"v":0.374435,"d":"0.3744"},"gi|225437410|ref|XP_002270967.1|","PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]","gi|359479940|ref|XM_002270931.2|","PREDICTED: Vitis vinifera U1 small nuclear ribonucleoprotein A-like (LOC100243572), mRNA","sp|Q39244|RU1A_ARATH","U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana GN=U1A PE=1 SV=1","-","-","K11094","aly:ARALYDRAFT_320780","U2 small nuclear ribonucleoprotein B''","GO:0000398//mRNA splicing, via spliceosome;GO:0009651//response to salt stress","GO:0017069//snRNA binding;GO:0000166//nucleotide binding","GO:0005730//nucleolus;GO:0005685//U1 snRNP;GO:0005681//spliceosomal complex;GO:0005829//cytosol"]
[435,"CSE_Unigene12857","SW_Unigene12911","-","-","+(Mostly)",945,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225437465|ref|XP_002273574.1|","PREDICTED: mitochondrial nicotinamide adenine dinucleotide transporter 1 isoform 1 [Vitis vinifera] >gi|297743935|emb|CBI36905.3| unnamed protein product [Vitis vinifera]","gi|359480086|ref|XM_002273538.2|","PREDICTED: Vitis vinifera mitochondrial nicotinamide adenine dinucleotide transporter 1-like, transcript variant 1 (LOC100258843), mRNA","sp|O22261|NDT1_ARATH","Nicotinamide adenine dinucleotide transporter 1, chloroplastic OS=Arabidopsis thaliana GN=NDT1 PE=1 SV=2","-","-","K15115","vvi:100258843","solute carrier family 25 (mitochondrial folate transporter), member 32","GO:0055085//transmembrane transport;GO:0043132//NAD transport;GO:0006839//mitochondrial transport","GO:0051724//NAD transporter activity","GO:0005743//mitochondrial inner membrane;GO:0031969//chloroplast membrane;GO:0016021//integral to membrane"]
[436,"CSE_Unigene9333","SW_Unigene23550","-","-","+(Mostly)",1545,{"v":0.971,"d":"97.10%"},45,8,37,{"v":1.65848,"d":"1.658"},{"v":0.230021,"d":"0.2300"},"gi|359479947|ref|XP_002270567.2|","PREDICTED: uncharacterized protein LOC100260535 [Vitis vinifera]","gi|359479946|ref|XM_002270531.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260535 (LOC100260535), mRNA","-","-","-","-","-","-","-","-","-","-"]
[437,"CSE_Unigene989","SW_Unigene22188","-","-","+(Mostly)",2325,{"v":0.991,"d":"99.10%"},16,8,8,{"v":0.280842,"d":"0.281"},{"v":0.0125856,"d":"0.0126"},"gi|147821303|emb|CAN74586.1|","hypothetical protein VITISV_041989 [Vitis vinifera]","gi|225437590|ref|XM_002277383.1|","PREDICTED: Vitis vinifera DEAD-box ATP-dependent RNA helicase 24-like (LOC100241725), mRNA","sp|O22907|RH24_ARATH","DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana GN=RH24 PE=1 SV=2","COG0513","Superfamily II DNA and RNA helicases","K12835","vvi:100241725","ATP-dependent RNA helicase DDX42 [EC:3.6.4.13]","-","GO:0008026//ATP-dependent helicase activity;GO:0003723//RNA binding;GO:0005524//ATP binding","GO:0005634//nucleus;GO:0005739//mitochondrion"]
[438,"CSE_Unigene17549","SW_Unigene12546","-","-","+(Mostly)",591,{"v":0.99,"d":"99.00%"},6,4,2,{"v":0.166273,"d":"0.166"},{"v":0.0378324,"d":"0.0378"},"gi|225437667|ref|XP_002279289.1|","PREDICTED: nitrogen regulatory protein P-II homolog [Vitis vinifera] >gi|297744028|emb|CBI36998.3| unnamed protein product [Vitis vinifera]","gi|349730665|emb|FQ389073.1|","Vitis vinifera clone SS0AEB20YO19","sp|Q9ZST4|GLNB_ARATH","Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana GN=GLB1 PE=1 SV=1","COG0347","Nitrogen regulatory protein PII","-","-","-","GO:0044272//sulfur compound biosynthetic process;GO:0009108//coenzyme biosynthetic process;GO:0009695//jasmonic acid biosynthetic process;GO:2000013//regulation of arginine biosynthetic process via ornithine;GO:0009749//response to glucose stimulus;GO:0009072//aromatic amino acid family metabolic process;GO:0006808//regulation of nitrogen utilization;GO:0009651//response to salt stress;GO:0009416//response to light stimulus;GO:0009117//nucleotide metabolic process;GO:0009744//response to sucrose stimulus;GO:0001666//response to hypoxia;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0010310//regulation of hydrogen peroxide metabolic process;GO:0050790//regulation of catalytic activity;GO:0009862//systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0006766//vitamin metabolic process;GO:0006733//oxidoreduction coenzyme metabolic process;GO:0009750//response to fructose stimulus;GO:0000096//sulfur amino acid metabolic process;GO:0009106//lipoate metabolic process;GO:0009409//response to cold;GO:0007030//Golgi organization;GO:0042304//regulation of fatty acid biosynthetic process;GO:0006816//calcium ion transport;GO:0009718//anthocyanin-containing compound biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006546//glycine catabolic process;GO:0006355//regulation of transcription, DNA-dependent","GO:0005344//oxygen transporter activity;GO:0000287//magnesium ion binding;GO:0005515//protein binding;GO:0010307//acetylglutamate kinase regulator activity;GO:0005524//ATP binding;GO:0019825//oxygen binding","GO:0005829//cytosol;GO:0009506//plasmodesma;GO:0005618//cell wall;GO:0005886//plasma membrane;GO:0009534//chloroplast thylakoid"]
[439,"CSE_Unigene16336","SW_Unigene14975","-","-","+(Mostly)",1644,{"v":0.992,"d":"99.20%"},10,6,4,{"v":0.246159,"d":"0.246"},{"v":0.029116,"d":"0.0291"},"gi|225437762|ref|XP_002273793.1|","PREDICTED: protoporphyrinogen oxidase, chloroplastic [Vitis vinifera] >gi|297744080|emb|CBI37050.3| unnamed protein product [Vitis vinifera]","gi|359480233|ref|XM_002273757.2|","PREDICTED: Vitis vinifera protoporphyrinogen oxidase, chloroplastic-like (LOC100243415), mRNA","sp|P55826|PPOC_ARATH","Protoporphyrinogen oxidase, chloroplastic OS=Arabidopsis thaliana GN=PPOX PE=2 SV=1","COG1232","Protoporphyrinogen oxidase","K00231","vvi:100243415","oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]","GO:0055114//oxidation-reduction process;GO:0006779//porphyrin-containing compound biosynthetic process;GO:0008615//pyridoxine biosynthetic process;GO:0019761//glucosinolate biosynthetic process;GO:0042817//pyridoxal metabolic process","GO:0004729//oxygen-dependent protoporphyrinogen oxidase activity;GO:0004733//pyridoxamine-phosphate oxidase activity;GO:0010181//FMN binding","GO:0005829//cytosol;GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid;GO:0005576//extracellular region"]
[440,"CSE_Unigene18229","SW_Unigene12295","-","-","+(Mostly)",2985,{"v":0.995,"d":"99.50%"},15,8,7,{"v":0.25383,"d":"0.254"},{"v":0.00915608,"d":"0.0092"},"gi|297744119|emb|CBI37089.3|","unnamed protein product [Vitis vinifera]","gi|359480256|ref|XM_003632374.1|","PREDICTED: Vitis vinifera poly [ADP-ribose] polymerase 1-like, transcript variant 2 (LOC100261796), mRNA","sp|Q9ZP54|PARP1_ARATH","Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2","-","-","K10798","vvi:100261796","poly [ADP-ribose] polymerase [EC:2.4.2.30]","GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0006346//methylation-dependent chromatin silencing;GO:0000911//cytokinesis by cell plate formation;GO:0006471//protein ADP-ribosylation;GO:0043687//post-translational protein modification;GO:0006261//DNA-dependent DNA replication;GO:0006306//DNA methylation;GO:0009616//virus induced gene silencing;GO:0048449//floral organ formation;GO:0007129//synapsis;GO:0009737//response to abscisic acid stimulus;GO:0009555//pollen development;GO:0010014//meristem initiation;GO:0006979//response to oxidative stress;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0010212//response to ionizing radiation;GO:0000226//microtubule cytoskeleton organization;GO:0055114//oxidation-reduction process;GO:0006275//regulation of DNA replication;GO:0007267//cell-cell signaling;GO:0009909//regulation of flower development;GO:0051567//histone H3-K9 methylation;GO:0010564//regulation of cell cycle process;GO:0007131//reciprocal meiotic recombination;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0016444//somatic cell DNA recombination;GO:0009855//determination of bilateral symmetry;GO:0000724//double-strand break repair via homologous recombination;GO:0010073//meristem maintenance;GO:0007067//mitosis","GO:0051287//NAD binding;GO:0003950//NAD+ ADP-ribosyltransferase activity;GO:0008270//zinc ion binding;GO:0003677//DNA binding;GO:0032440//2-alkenal reductase [NAD(P)] activity","GO:0005634//nucleus"]
[441,"CSE_Unigene11771","SW_Unigene3884","-","-","+(Mostly)",1926,{"v":0.993,"d":"99.30%"},14,7,7,{"v":0.40654,"d":"0.407"},{"v":0.125998,"d":"0.1260"},"gi|225437850|ref|XP_002263867.1|","PREDICTED: nephrocystin-3 [Vitis vinifera]","gi|225437849|ref|XM_002263831.1|","PREDICTED: Vitis vinifera nephrocystin-3-like (LOC100247992), mRNA","-","-","COG0457","FOG: TPR repeat","-","-","-","GO:0034976//response to endoplasmic reticulum stress;GO:0006457//protein folding;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0009408//response to heat;GO:0009644//response to high light intensity;GO:0042542//response to hydrogen peroxide","-","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[442,"CSE_Unigene13120","SW_Unigene22950","-","-","+(Mostly)",1020,{"v":0.997,"d":"99.70%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225438103|ref|XP_002277616.1|","PREDICTED: probable arabinose 5-phosphate isomerase [Vitis vinifera]","gi|359480287|ref|XM_002277580.2|","PREDICTED: Vitis vinifera probable arabinose 5-phosphate isomerase-like (LOC100249789), mRNA","sp|Q9M1T1|SETH3_ARATH","Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana GN=SETH3 PE=2 SV=1","COG0794","Predicted sugar phosphate isomerase involved in capsule formation","K06041","vvi:100249789","arabinose-5-phosphate isomerase [EC:5.3.1.13]","GO:0005975//carbohydrate metabolic process;GO:0019243//methylglyoxal catabolic process to D-lactate","GO:0019146//arabinose-5-phosphate isomerase activity;GO:0030246//carbohydrate binding","-"]
[443,"CSE_Unigene12714","SW_Unigene2830","-","-","+(Mostly)",1200,{"v":0.988,"d":"98.80%"},15,8,7,{"v":0.312308,"d":"0.312"},{"v":0.024122,"d":"0.0241"},"gi|225438027|ref|XP_002271402.1|","PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis vinifera]","gi|225438026|ref|XM_002271366.1|","PREDICTED: Vitis vinifera protein BREAST CANCER SUSCEPTIBILITY 1 homolog (LOC100253255), mRNA","sp|Q8RXD4|BRCA1_ARATH","Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis thaliana GN=BRCA1 PE=2 SV=1","-","-","K10683","vvi:100253255","BRCA1-associated RING domain protein 1 [EC:6.3.2.19]","GO:0000278//mitotic cell cycle;GO:0051726//regulation of cell cycle;GO:0006261//DNA-dependent DNA replication;GO:0009965//leaf morphogenesis;GO:0000724//double-strand break repair via homologous recombination;GO:0016444//somatic cell DNA recombination;GO:0051567//histone H3-K9 methylation;GO:0031047//gene silencing by RNA;GO:0009555//pollen development;GO:0009934//regulation of meristem structural organization;GO:0008283//cell proliferation;GO:0006275//regulation of DNA replication;GO:0006306//DNA methylation","GO:0003677//DNA binding","GO:0005622//intracellular"]
[444,"CSE_CL6683_Contig2","SW_CL5276_Contig1","-","-","+(Mostly)",1092,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225437945|ref|XP_002269637.1|","PREDICTED: tetratricopeptide repeat protein 4 homolog [Vitis vinifera] >gi|297744240|emb|CBI37210.3| unnamed protein product [Vitis vinifera]","gi|359480326|ref|XM_002269601.2|","PREDICTED: Vitis vinifera tetratricopeptide repeat protein 4 homolog-like (LOC100253278), mRNA","sp|Q9SUT5|SGT1B_ARATH","Protein SGT1 homolog B OS=Arabidopsis thaliana GN=SGT1B PE=1 SV=1","COG0457","FOG: TPR repeat","K09553","osa:4330134","stress-induced-phosphoprotein 1","GO:0006950//response to stress","GO:0051879//Hsp90 protein binding","GO:0005737//cytoplasm"]
[445,"CSE_Unigene13740","SW_Unigene21832","-","-","+(Mostly)",834,{"v":0.993,"d":"99.30%"},3,1,2,{"v":0.668754,"d":"0.669"},{"v":0.56427,"d":"0.5643"},"gi|225465451|ref|XP_002266369.1|","PREDICTED: PPPDE peptidase domain-containing protein 2-like isoform 2 [Vitis vinifera] >gi|225465453|ref|XP_002266333.1| PREDICTED: PPPDE peptidase domain-containing protein 2-like isoform 1 [Vitis vinifera]","gi|359479888|ref|XM_002266333.2|","PREDICTED: Vitis vinifera PPPDE peptidase domain-containing protein 2-like, transcript variant 2 (LOC100249956), mRNA","sp|Q93VG8|PPDEX_ARATH","DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1","-","-","-","-","-","-","-","GO:0005634//nucleus;GO:0005737//cytoplasm"]
[446,"CSE_CL3787_Contig1","SW_Unigene12302","-","-","+(Mostly)",1479,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.160556,"d":"0.161"},{"v":0.0341252,"d":"0.0341"},"gi|359480144|ref|XP_002269420.2|","PREDICTED: pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like [Vitis vinifera] >gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]","gi|359480143|ref|XM_002269384.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like (LOC100241357), mRNA","sp|Q9FKC3|PP424_ARATH","Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0009536//plastid"]
[447,"CSE_Unigene17690","SW_CL2087_Contig1","-","-","+(Mostly)",1827,{"v":0.993,"d":"99.30%"},13,4,9,{"v":0.953138,"d":"0.953"},{"v":0.990069,"d":"0.9901"},"gi|225463870|ref|XP_002268712.1|","PREDICTED: GPI transamidase component PIG-S-like [Vitis vinifera]","gi|359480363|ref|XM_002268676.2|","PREDICTED: Vitis vinifera GPI transamidase component PIG-S-like (LOC100262163), mRNA","-","-","-","-","K05291","vvi:100262163","phosphatidylinositol glycan, class S","-","-","GO:0005774//vacuolar membrane;GO:0005783//endoplasmic reticulum;GO:0005634//nucleus"]
[448,"CSE_CL6867_Contig2","SW_Unigene13203","-","-","+(Mostly)",801,{"v":0.993,"d":"99.30%"},6,3,3,{"v":0.3423,"d":"0.342"},{"v":0.178874,"d":"0.1789"},"gi|359481083|ref|XP_002265170.2|","PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera] >gi|296089289|emb|CBI39061.3| unnamed protein product [Vitis vinifera]","gi|359481082|ref|XM_002265134.2|","PREDICTED: Vitis vinifera uncharacterized LOC100246079 (LOC100246079), mRNA","-","-","-","-","K13091","gmx:100789839","RNA-binding protein 39","-","GO:0003676//nucleic acid binding;GO:0000166//nucleotide binding","-"]
[449,"CSE_Unigene14774","SW_Unigene16399","-","-","+(Mostly)",678,{"v":0.994,"d":"99.40%"},4,1,3,{"v":1.26774,"d":"1.268"},{"v":0.748738,"d":"0.7487"},"gi|359481089|ref|XP_002265324.2|","PREDICTED: N(6)-adenine-specific DNA methyltransferase 2-like [Vitis vinifera]","gi|359481088|ref|XM_002265288.2|","PREDICTED: Vitis vinifera N(6)-adenine-specific DNA methyltransferase 2-like (LOC100252975), mRNA","-","-","-","-","-","-","-","GO:0032259//methylation","GO:0003676//nucleic acid binding;GO:0008168//methyltransferase activity","GO:0005737//cytoplasm"]
[450,"CSE_Unigene1176","SW_Unigene14800","-","-","+(Mostly)",2730,{"v":0.996,"d":"99.60%"},12,8,4,{"v":0.178756,"d":"0.179"},{"v":0.00403988,"d":"0.0040"},"gi|225439315|ref|XP_002267321.1|","PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Vitis vinifera] >gi|296089322|emb|CBI39094.3| unnamed protein product [Vitis vinifera]","gi|359481114|ref|XM_002267285.2|","PREDICTED: Vitis vinifera D-lactate dehydrogenase [cytochrome], mitochondrial-like (LOC100242784), mRNA","sp|Q94AX4|DLD_ARATH","D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1","COG0277","FAD/FMN-containing dehydrogenases","K00102","vvi:100242784","D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]","GO:0051596//methylglyoxal catabolic process;GO:0055114//oxidation-reduction process","GO:0042802//identical protein binding;GO:0050660//flavin adenine dinucleotide binding;GO:0008891//glycolate oxidase activity;GO:0008762//UDP-N-acetylmuramate dehydrogenase activity;GO:0004458//D-lactate dehydrogenase (cytochrome) activity;GO:0005524//ATP binding;GO:0019154//glycolate dehydrogenase activity","GO:0005739//mitochondrion"]
[451,"CSE_Unigene710","SW_Unigene22844","-","-","+(Mostly)",2232,{"v":0.974,"d":"97.40%"},28,14,14,{"v":0.404373,"d":"0.404"},{"v":0.0198259,"d":"0.0198"},"gi|225439751|ref|XP_002273172.1|","PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like [Vitis vinifera]","gi|359481359|ref|XM_002273136.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like (LOC100248209), mRNA","sp|Q9SF38|PP222_ARATH","Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006397//mRNA processing;GO:0019252//starch biosynthetic process;GO:0000023//maltose metabolic process","GO:0003729//mRNA binding","GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[452,"CSE_Unigene15626","SW_Unigene16304","-","-","+(Mostly)",993,{"v":0.993,"d":"99.30%"},7,4,3,{"v":0.295696,"d":"0.296"},{"v":0.105878,"d":"0.1059"},"gi|225444515|ref|XP_002274769.1|","PREDICTED: peroxidase 42 isoform 1 [Vitis vinifera] >gi|147768417|emb|CAN60224.1| hypothetical protein VITISV_039918 [Vitis vinifera]","gi|225444514|ref|XM_002274733.1|","PREDICTED: Vitis vinifera peroxidase 42-like, transcript variant 1 (LOC100241814), mRNA","sp|Q9SB81|PER42_ARATH","Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2","-","-","K00430","vvi:100241814","peroxidase [EC:1.11.1.7]","GO:0055114//oxidation-reduction process;GO:0006979//response to oxidative stress","GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0004601//peroxidase activity","-"]
[453,"CSE_Unigene15089","SW_Unigene19216","-","-","+(Mostly)",1392,{"v":0.997,"d":"99.70%"},4,3,1,{"v":0.103017,"d":"0.103"},{"v":0.0405321,"d":"0.0405"},"gi|225439936|ref|XP_002280406.1|","PREDICTED: dnaJ homolog subfamily C member 3 homolog [Vitis vinifera] >gi|297741582|emb|CBI32714.3| unnamed protein product [Vitis vinifera]","gi|225439935|ref|XM_002280370.1|","PREDICTED: Vitis vinifera dnaJ homolog subfamily C member 3 homolog-like (LOC100265482), mRNA","sp|P42825|DNAJ2_ARATH","Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K09523","pop:POPTR_576677","DnaJ homolog subfamily C member 3","GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0034976//response to endoplasmic reticulum stress;GO:0042542//response to hydrogen peroxide;GO:0009408//response to heat","GO:0031072//heat shock protein binding","GO:0005788//endoplasmic reticulum lumen;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005886//plasma membrane"]
[454,"CSE_Unigene13493","SW_Unigene23069","-","-","+(Mostly)",2061,{"v":0.993,"d":"99.30%"},15,10,5,{"v":0.168085,"d":"0.168"},{"v":0.00086773,"d":"0.0009"},"gi|225440005|ref|XP_002276355.1|","PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Vitis vinifera]","gi|147863870|emb|AM472005.2|","Vitis vinifera contig VV78X048855.4, whole genome shotgun sequence","sp|Q9ZUU3|PP190_ARATH","Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0009535//chloroplast thylakoid membrane;GO:0005739//mitochondrion"]
[455,"CSE_Unigene1844","SW_Unigene6114","-","-","+(Mostly)",6459,{"v":0.996,"d":"99.60%"},26,21,5,{"v":0.0993854,"d":"0.099"},{"v":9.50601e-08,"d":"0.0000"},"gi|297741628|emb|CBI32760.3|","unnamed protein product [Vitis vinifera]","gi|359481390|ref|XM_002276674.2|","PREDICTED: Vitis vinifera RNA polymerase sigma factor rpoD-like (LOC100267110), mRNA","sp|Q9LD95|SIGF_ARATH","RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF PE=1 SV=1","COG0568","DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)","K03086","ota:Ot06g01190","RNA polymerase primary sigma factor","GO:0016117//carotenoid biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006352//DNA-dependent transcription, initiation;GO:0009902//chloroplast relocation;GO:0090351//seedling development;GO:0009965//leaf morphogenesis;GO:0034660//ncRNA metabolic process;GO:0030154//cell differentiation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0071483//cellular response to blue light;GO:0010027//thylakoid membrane organization","GO:0003899//DNA-directed RNA polymerase activity;GO:0005515//protein binding;GO:0001053//plastid sigma factor activity;GO:0003677//DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0009507//chloroplast;GO:0005634//nucleus"]
[456,"CSE_Unigene16610","SW_Unigene6575","-","-","+(Mostly)",2652,{"v":0.996,"d":"99.60%"},10,10,"NA",{"v":0,"d":"0.000"},"NA","gi|225440123|ref|XP_002277489.1|","PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1-like [Vitis vinifera]","gi|147795705|emb|AM449245.2|","Vitis vinifera contig VV78X170167.3, whole genome shotgun sequence","sp|Q9M1I1|FB304_ARATH","F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1","COG0553","Superfamily II DNA/RNA helicases, SNF2 family","K15711","vvi:100263696","SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 6.3.2.19]","GO:0045132//meiotic chromosome segregation;GO:0006259//DNA metabolic process;GO:0033044//regulation of chromosome organization;GO:0007062//sister chromatid cohesion;GO:0031048//chromatin silencing by small RNA","GO:0008270//zinc ion binding;GO:0003677//DNA binding;GO:0005524//ATP binding;GO:0004386//helicase activity","GO:0005634//nucleus"]
[457,"CSE_Unigene10947","SW_Unigene5865","-","-","+(Mostly)",789,{"v":0.985,"d":"98.50%"},9,{"v":6.97987,"d":"7"},{"v":2.02013,"d":"2"},{"v":0.108129,"d":"0.108"},{"v":0.002379,"d":"0.0024"},"gi|225440155|ref|XP_002283307.1|","PREDICTED: psbP domain-containing protein 6, chloroplastic [Vitis vinifera] >gi|297741687|emb|CBI32819.3| unnamed protein product [Vitis vinifera]","gi|225440154|ref|XM_002283271.1|","PREDICTED: Vitis vinifera psbP domain-containing protein 6, chloroplastic-like (LOC100246497), mRNA","sp|Q9LXX5|PPD6_ARATH","PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana GN=PPD6 PE=1 SV=1","-","-","K02717","ath:AT2G30790","photosystem II oxygen-evolving enhancer protein 2","GO:0009965//leaf morphogenesis;GO:0010027//thylakoid membrane organization;GO:0030154//cell differentiation;GO:0015979//photosynthesis","GO:0005509//calcium ion binding;GO:0005515//protein binding","GO:0019898//extrinsic to membrane;GO:0009570//chloroplast stroma;GO:0009654//oxygen evolving complex;GO:0009543//chloroplast thylakoid lumen"]
[458,"CSE_Unigene13755","SW_Unigene12258","-","-","+(Mostly)",705,{"v":0.989,"d":"98.90%"},5,1,4,{"v":1.29612,"d":"1.296"},{"v":0.754179,"d":"0.7542"},"gi|225440240|ref|XP_002283874.1|","PREDICTED: probable aquaporin SIP2-1 [Vitis vinifera] >gi|297741728|emb|CBI32860.3| unnamed protein product [Vitis vinifera]","gi|225440239|ref|XM_002283838.1|","PREDICTED: Vitis vinifera probable aquaporin SIP2-1-like (LOC100246584), mRNA","sp|Q9M1K3|SIP21_ARATH","Probable aquaporin SIP2-1 OS=Arabidopsis thaliana GN=SIP2-1 PE=2 SV=1","-","-","K09875","aly:ARALYDRAFT_907149","aquaporin SIP","GO:0006810//transport;GO:0046685//response to arsenic-containing substance","GO:0005215//transporter activity","GO:0016021//integral to membrane;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[459,"CSE_Unigene15737","SW_Unigene8329","-","-","+(Mostly)",1209,{"v":0.994,"d":"99.40%"},7,4,3,{"v":0.243539,"d":"0.244"},{"v":0.0669525,"d":"0.0670"},"gi|225440242|ref|XP_002283892.1|","PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Vitis vinifera] >gi|147844779|emb|CAN79041.1| hypothetical protein VITISV_043754 [Vitis vinifera]","gi|225440241|ref|XM_002283856.1|","PREDICTED: Vitis vinifera magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like (LOC100241461), mRNA","sp|Q6SJV8|CRD1_GOSHI","Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2","-","-","K04035","vvi:100241461","magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]","GO:0036068;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0010207//photosystem II assembly;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0019216//regulation of lipid metabolic process;GO:0009416//response to light stimulus;GO:0019344//cysteine biosynthetic process;GO:0055114//oxidation-reduction process;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization;GO:0031408//oxylipin biosynthetic process","GO:0005506//iron ion binding;GO:0003677//DNA binding;GO:0048529//magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity","GO:0009706//chloroplast inner membrane;GO:0009535//chloroplast thylakoid membrane"]
[460,"CSE_CL5441_Contig2","SW_CL3654_Contig2","-","-","+(Mostly)",570,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|147807423|emb|CAN70759.1|","hypothetical protein VITISV_012852 [Vitis vinifera]","gi|359481477|ref|XM_002265223.2|","PREDICTED: Vitis vinifera protein PLANT CADMIUM RESISTANCE 10-like, transcript variant 1 (LOC100264543), mRNA","sp|Q8S8T8|PCR10_ARATH","Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1","-","-","-","-","-","GO:0006661//phosphatidylinositol biosynthetic process","-","GO:0005886//plasma membrane"]
[461,"CSE_Unigene1899","SW_Unigene19626","-","-","+(Mostly)",1344,{"v":0.991,"d":"99.10%"},12,8,4,{"v":0.137988,"d":"0.138"},{"v":0.00108646,"d":"0.0011"},"gi|147857564|emb|CAN82884.1|","hypothetical protein VITISV_023155 [Vitis vinifera]","gi|359480972|ref|XM_002265707.2|","PREDICTED: Vitis vinifera probable U3 small nucleolar RNA-associated protein 11-like (LOC100255309), mRNA","sp|Q8S1Z1|UTP11_ORYSJ","Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2","COG5223","Uncharacterized conserved protein","K14769","vvi:100255309","U3 small nucleolar RNA-associated protein 11","GO:0009560//embryo sac egg cell differentiation;GO:0000741//karyogamy;GO:0006364//rRNA processing","GO:0005515//protein binding","GO:0005730//nucleolus;GO:0032040//small-subunit processome"]
[462,"CSE_Unigene16638","SW_Unigene6931","-","-","+(Mostly)",1350,{"v":0.996,"d":"99.60%"},6,5,1,{"v":0.0704364,"d":"0.070"},{"v":0.00540447,"d":"0.0054"},"gi|296085918|emb|CBI31242.3|","unnamed protein product [Vitis vinifera]","gi|225439242|ref|XM_002277155.1|","PREDICTED: Vitis vinifera uncharacterized LOC100250226 (LOC100250226), mRNA","-","-","COG1346","Putative effector of murein hydrolase","-","-","-","GO:0070838//divalent metal ion transport;GO:0010027//thylakoid membrane organization;GO:0030003//cellular cation homeostasis;GO:0009658//chloroplast organization","-","GO:0005886//plasma membrane;GO:0009706//chloroplast inner membrane"]
[463,"CSE_Unigene11419","SW_Unigene21931","-","-","+(Mostly)",1506,{"v":0.991,"d":"99.10%"},14,4,10,{"v":0.82059,"d":"0.821"},{"v":0.73886,"d":"0.7389"},"gi|225439719|ref|XP_002273138.1|","PREDICTED: serine/threonine-protein kinase STN8, chloroplastic [Vitis vinifera]","gi|349715149|emb|FQ380451.1|","Vitis vinifera clone SS0ACG59YJ05","sp|Q9LZV4|STN8_ARATH","Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana GN=STN8 PE=2 SV=1","COG0515","Serine/threonine protein kinase","K08282","cme:CMS463C","non-specific serine/threonine protein kinase [EC:2.7.11.1]","GO:0006468//protein phosphorylation;GO:0042549//photosystem II stabilization","GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity","GO:0009507//chloroplast;GO:0009579//thylakoid"]
[464,"CSE_Unigene17560","SW_Unigene16810","-","-","+(Mostly)",1842,{"v":0.961,"d":"96.10%"},58,{"v":25.1914,"d":"25"},{"v":32.8086,"d":"33"},{"v":0.490158,"d":"0.490"},{"v":0.00665562,"d":"0.0067"},"gi|297735543|emb|CBI18037.3|","unnamed protein product [Vitis vinifera]","gi|225439686|ref|XM_002271531.1|","PREDICTED: Vitis vinifera probable receptor-like protein kinase At5g15080 (LOC100246618), mRNA","sp|Q9LFP7|Y5158_ARATH","Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K05658","vvi:100262734","ATP-binding cassette, subfamily B (MDR/TAP), member 1","GO:0006468//protein phosphorylation;GO:0006914//autophagy","GO:0004672//protein kinase activity;GO:0005524//ATP binding","GO:0005886//plasma membrane"]
[465,"CSE_CL1582_Contig1","SW_Unigene12905","-","-","+(Mostly)",1107,{"v":0.992,"d":"99.20%"},9,7,2,{"v":0.101399,"d":"0.101"},{"v":0.00189815,"d":"0.0019"},"gi|225439671|ref|XP_002270753.1|","PREDICTED: serine/threonine-protein kinase HT1-like [Vitis vinifera]","gi|225439670|ref|XM_002270717.1|","PREDICTED: Vitis vinifera serine/threonine-protein kinase HT1-like (LOC100244846), mRNA","sp|Q2MHE4|HT1_ARATH","Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K04424","aly:ARALYDRAFT_909157","sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]","GO:0006468//protein phosphorylation","GO:0004715//non-membrane spanning protein tyrosine kinase activity;GO:0004712//protein serine/threonine/tyrosine kinase activity;GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity","GO:0005737//cytoplasm"]
[466,"CSE_CL3206_Contig2","SW_CL3698_Contig3","-","-","+(Mostly)",1287,{"v":0.998,"d":"99.80%"},3,1,2,{"v":0.60264,"d":"0.603"},{"v":0.534404,"d":"0.5344"},"gi|225441842|ref|XP_002284093.1|","PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like [Vitis vinifera]","gi|225441841|ref|XM_002284057.1|","PREDICTED: Vitis vinifera AP2-like ethylene-responsive transcription factor At2g41710-like (LOC100248718), mRNA","sp|Q8GWK2|AP2L4_ARATH","AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 PE=2 SV=2","-","-","K09285","vvi:100248718","AP2-like factor, ANT lineage","GO:0055114//oxidation-reduction process;GO:0006355//regulation of transcription, DNA-dependent","GO:0003677//DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity;GO:0032440//2-alkenal reductase [NAD(P)] activity","GO:0005634//nucleus"]
[467,"CSE_CL1781_Contig1","SW_CL3656_Contig2","-","-","+(Mostly)",804,{"v":0.994,"d":"99.40%"},5,2,3,{"v":0.481307,"d":"0.481"},{"v":0.352621,"d":"0.3526"},"gi|225441795|ref|XP_002283838.1|","PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like isoform 1 [Vitis vinifera]","gi|147867308|emb|AM460819.2|","Vitis vinifera contig VV78X099670.6, whole genome shotgun sequence","sp|Q0D5B9|SAP16_ORYSJ","Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2","-","-","-","-","-","-","GO:0008270//zinc ion binding","GO:0005622//intracellular"]
[468,"CSE_CL7101_Contig1","SW_CL3806_Contig2","-","-","+(Mostly)",2025,{"v":0.996,"d":"99.60%"},8,6,2,{"v":0.0971073,"d":"0.097"},{"v":0.00245887,"d":"0.0025"},"gi|225441779|ref|XP_002283552.1|","PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis vinifera] >gi|297739681|emb|CBI29863.3| unnamed protein product [Vitis vinifera]","gi|359481704|ref|XM_002283516.2|","PREDICTED: Vitis vinifera GTP-binding protein TypA/BipA homolog-like, transcript variant 1 (LOC100264026), mRNA","sp|C1N1Y2|GUFP_MICPC","Translation factor GUF1 homolog, chloroplastic OS=Micromonas pusilla (strain CCMP1545) GN=MICPUCDRAFT_51778 PE=3 SV=1","COG1217","Predicted membrane GTPase involved in stress response","K06207","vvi:100264026","GTP-binding protein","GO:0031425//chloroplast RNA processing;GO:0010468//regulation of gene expression;GO:0006414//translational elongation;GO:0006184//GTP catabolic process;GO:0000302//response to reactive oxygen species","GO:0003746//translation elongation factor activity;GO:0005525//GTP binding;GO:0003924//GTPase activity","GO:0009570//chloroplast stroma;GO:0005886//plasma membrane"]
[469,"CSE_Unigene14229","SW_Unigene11244","-","-","+(Mostly)",1929,{"v":0.996,"d":"99.60%"},7,4,3,{"v":0.275214,"d":"0.275"},{"v":0.0893168,"d":"0.0893"},"gi|225441756|ref|XP_002277619.1|","PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]","gi|225441755|ref|XM_002277583.1|","PREDICTED: Vitis vinifera DNA-binding protein SMUBP-2-like (LOC100262429), mRNA","sp|Q9FJR0|RENT1_ARATH","Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2","COG1112","Superfamily I DNA and RNA helicases and helicase subunits","K14326","olu:OSTLU_443","regulator of nonsense transcripts 1 [EC:3.6.4.-]","-","GO:0004386//helicase activity;GO:0003677//DNA binding;GO:0005524//ATP binding","GO:0005634//nucleus"]
[470,"CSE_Unigene19365","SW_Unigene21602","-","-","+(Mostly)",1566,{"v":0.991,"d":"99.10%"},14,11,3,{"v":0.0981516,"d":"0.098"},{"v":7.51985e-05,"d":"0.0001"},"gi|359481833|ref|XP_002277512.2|","PREDICTED: carboxyl-terminal-processing protease-like [Vitis vinifera]","gi|359481832|ref|XM_002277476.2|","PREDICTED: Vitis vinifera carboxyl-terminal-processing protease-like (LOC100260662), mRNA","sp|O04073|CTPA_SCEOB","C-terminal processing peptidase, chloroplastic OS=Scenedesmus obliquus GN=ctpA PE=1 SV=1","COG0793","Periplasmic protease","K01802","ota:Ot01g03920","peptidylprolyl isomerase [EC:5.2.1.8]","GO:0035556//intracellular signal transduction;GO:0015996//chlorophyll catabolic process;GO:0006508//proteolysis","GO:0008236//serine-type peptidase activity","GO:0005576//extracellular region;GO:0016020//membrane;GO:0009543//chloroplast thylakoid lumen"]
[471,"CSE_CL7502_Contig1","SW_CL3153_Contig2","-","-","+(Mostly)",1074,{"v":0.993,"d":"99.30%"},7,6,1,{"v":0.050128,"d":"0.050"},{"v":0.000845495,"d":"0.0008"},"gi|225441674|ref|XP_002282707.1|","PREDICTED: uncharacterized protein C4orf29 homolog [Vitis vinifera] >gi|147852945|emb|CAN81264.1| hypothetical protein VITISV_030682 [Vitis vinifera]","gi|359482041|ref|XM_002282671.2|","PREDICTED: Vitis vinifera uncharacterized LOC100267511 (LOC100267511), mRNA","-","-","-","-","-","-","-","-","-","GO:0005576//extracellular region"]
[472,"CSE_CL4842_Contig1","SW_CL2156_Contig1","-","-","+(Mostly)",1068,{"v":0.981,"d":"98.10%"},12,6,6,{"v":0.286394,"d":"0.286"},{"v":0.0328778,"d":"0.0329"},"gi|225441631|ref|XP_002282103.1|","PREDICTED: uncharacterized protein LOC100252010 [Vitis vinifera] >gi|297739753|emb|CBI29935.3| unnamed protein product [Vitis vinifera]","gi|225441630|ref|XM_002282067.1|","PREDICTED: Vitis vinifera uncharacterized LOC100252010 (LOC100252010), mRNA","-","-","-","-","-","-","-","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0006098//pentose-phosphate shunt;GO:0009773//photosynthetic electron transport in photosystem I","GO:0003824//catalytic activity;GO:0030246//carbohydrate binding","GO:0010598//NAD(P)H dehydrogenase complex (plastoquinone);GO:0009535//chloroplast thylakoid membrane"]
[473,"CSE_Unigene12844","SW_CL2582_Contig1","-","-","+(Mostly)",504,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|225441569|ref|XP_002281390.1|","PREDICTED: mediator of RNA polymerase II transcription subunit 7 [Vitis vinifera] >gi|297739781|emb|CBI29963.3| unnamed protein product [Vitis vinifera]","gi|225441568|ref|XM_002281354.1|","PREDICTED: Vitis vinifera mediator of RNA polymerase II transcription subunit 7-like (LOC100257245), mRNA","sp|Q9LYW3|MED7A_ARATH","Mediator of RNA polymerase II transcription subunit 7a OS=Arabidopsis thaliana GN=MED7A PE=1 SV=1","-","-","K15148","vvi:100257245","mediator of RNA polymerase II transcription subunit 7","GO:0006357//regulation of transcription from RNA polymerase II promoter","GO:0005515//protein binding;GO:0001104//RNA polymerase II transcription cofactor activity","GO:0016592//mediator complex"]
[474,"CSE_Unigene18171","SW_Unigene18892","-","-","+(Mostly)",4191,{"v":0.995,"d":"99.50%"},23,16,7,{"v":0.151416,"d":"0.151"},{"v":1.8494e-06,"d":"0.0000"},"gi|225441567|ref|XP_002276675.1|","PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]","gi|225441566|ref|XM_002276639.1|","PREDICTED: Vitis vinifera pre-mRNA-splicing factor rse1-like (LOC100252096), mRNA","sp|Q9M0V3|DDB1A_ARATH","DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1","-","-","K12830","osa:4342674","splicing factor 3B subunit 3","GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0009755//hormone-mediated signaling pathway;GO:0006486//protein glycosylation;GO:0048825//cotyledon development;GO:0010182//sugar mediated signaling pathway","GO:0003676//nucleic acid binding","GO:0005634//nucleus"]
[475,"CSE_Unigene9429","SW_Unigene15284","-","-","+(Mostly)",2169,{"v":0.993,"d":"99.30%"},15,7,8,{"v":0.4141,"d":"0.414"},{"v":0.128103,"d":"0.1281"},"gi|225441495|ref|XP_002275839.1|","PREDICTED: gamma-tubulin complex component 3 homolog [Vitis vinifera]","gi|225441494|ref|XM_002275803.1|","PREDICTED: Vitis vinifera gamma-tubulin complex component 3 homolog (LOC100245188), mRNA","sp|Q9M350|GCP4_ARATH","Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana GN=At3g53760 PE=2 SV=2","-","-","-","-","-","GO:0007020//microtubule nucleation","GO:0015631//tubulin binding","GO:0005635//nuclear envelope;GO:0000930//gamma-tubulin complex;GO:0009898//internal side of plasma membrane;GO:0000922//spindle pole"]
[476,"CSE_Unigene12549","SW_Unigene13226","-","-","+(Mostly)",690,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.174117,"d":"0.174"},{"v":0.149448,"d":"0.1494"},"gi|225441313|ref|XP_002275793.1|","PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Vitis vinifera] >gi|297739900|emb|CBI30082.3| unnamed protein product [Vitis vinifera]","gi|359482205|ref|XM_002275757.2|","PREDICTED: Vitis vinifera ganglioside-induced differentiation-associated-protein 2-like (LOC100246998), mRNA","-","-","-","-","-","-","-","-","-","GO:0005737//cytoplasm"]
[477,"CSE_Unigene832","SW_CL2088_Contig3","-","-","+(Mostly)",705,{"v":0.991,"d":"99.10%"},6,3,3,{"v":0.42833,"d":"0.428"},{"v":0.256327,"d":"0.2563"},"gi|225441260|ref|XP_002274343.1|","PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera] >gi|359482231|ref|XP_003632738.1| PREDICTED: tubulin-specific chaperone B [Vitis vinifera] >gi|297739921|emb|CBI30103.3| unnamed protein product [Vitis vinifera]","gi|359482230|ref|XM_003632690.1|","PREDICTED: Vitis vinifera tubulin-specific chaperone B-like (LOC100250251), mRNA","-","-","COG5244","Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B","K14835","ota:Ot03g00050","ribosomal RNA methyltransferase Nop2 [EC:2.1.1.-]","GO:0009790//embryo development;GO:0051301//cell division;GO:0007021//tubulin complex assembly","-","GO:0009524//phragmoplast;GO:0005634//nucleus;GO:0009536//plastid"]
[478,"CSE_CL2596_Contig1","SW_Unigene21118","-","-","+(Mostly)",1386,{"v":0.994,"d":"99.40%"},9,7,2,{"v":0.102827,"d":"0.103"},{"v":0.000165276,"d":"0.0002"},"gi|225441258|ref|XP_002274313.1|","PREDICTED: cystathionine beta-lyase, chloroplastic [Vitis vinifera] >gi|297739922|emb|CBI30104.3| unnamed protein product [Vitis vinifera]","gi|225441257|ref|XM_002274277.1|","PREDICTED: Vitis vinifera cystathionine beta-lyase, chloroplastic-like (LOC100260731), mRNA","sp|P53780|METC_ARATH","Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1","COG0626","Cystathionine beta-lyases/cystathionine gamma-synthases","K01760","vvi:100260731","cystathionine beta-lyase [EC:4.4.1.8]","GO:0019279//L-methionine biosynthetic process from L-homoserine via cystathionine;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation","GO:0004123//cystathionine gamma-lyase activity;GO:0080146//L-cysteine desulfhydrase activity;GO:0004121//cystathionine beta-lyase activity;GO:0044540//L-cystine L-cysteine-lyase (deaminating);GO:0030170//pyridoxal phosphate binding","GO:0009570//chloroplast stroma"]
[479,"CSE_Unigene14365","SW_Unigene12773","-","-","+(Mostly)",1638,{"v":0.993,"d":"99.30%"},12,7,5,{"v":0.297239,"d":"0.297"},{"v":0.0349529,"d":"0.0350"},"gi|225441108|ref|XP_002265015.1|","PREDICTED: carotene epsilon-monooxygenase, chloroplastic-like [Vitis vinifera]","gi|225441107|ref|XM_002264979.1|","PREDICTED: Vitis vinifera carotene epsilon-monooxygenase, chloroplastic-like (LOC100243621), mRNA","sp|Q6TBX7|LUT1_ARATH","Carotene epsilon-monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=CYP97C1 PE=1 SV=1","COG2124","Cytochrome P450","K09837","vvi:100243621","carotene epsilon-monooxygenase [EC:1.14.99.45]","GO:0010103//stomatal complex morphogenesis;GO:0016117//carotenoid biosynthetic process;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016556//mRNA modification;GO:0015995//chlorophyll biosynthetic process;GO:0009965//leaf morphogenesis;GO:0030154//cell differentiation;GO:0055114//oxidation-reduction process","GO:0070330//aromatase activity;GO:0020037//heme binding;GO:0009055//electron carrier activity;GO:0019825//oxygen binding;GO:0005506//iron ion binding;GO:0009974//zeinoxanthin epsilon hydroxylase activity","GO:0009941//chloroplast envelope"]
[480,"CSE_Unigene18809","SW_Unigene560","-","-","+(Mostly)",1101,{"v":0.99,"d":"99.00%"},11,9,2,{"v":0.0775305,"d":"0.078"},{"v":0.000177626,"d":"0.0002"},"gi|225440994|ref|XP_002283576.1|","PREDICTED: delta(14)-sterol reductase [Vitis vinifera] >gi|297740061|emb|CBI30243.3| unnamed protein product [Vitis vinifera]","gi|359482308|ref|XM_002283540.2|","PREDICTED: Vitis vinifera delta(14)-sterol reductase-like (LOC100247778), mRNA","sp|Q9LDR4|ERG24_ARATH","Delta(14)-sterol reductase OS=Arabidopsis thaliana GN=FK PE=1 SV=2","-","-","K00222","vvi:100247778","delta14-sterol reductase [EC:1.3.1.70]","GO:0016132//brassinosteroid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0006084//acetyl-CoA metabolic process;GO:0019745//pentacyclic triterpenoid biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0016126//sterol biosynthetic process","GO:0050613//delta14-sterol reductase activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0016020//membrane;GO:0005634//nucleus"]
[481,"CSE_Unigene12326","SW_CL8118_Contig1","-","-","+(Mostly)",1023,{"v":0.988,"d":"98.80%"},12,5,7,{"v":0.54444,"d":"0.544"},{"v":0.31518,"d":"0.3152"},"gi|359482324|ref|XP_002283153.2|","PREDICTED: uridine nucleosidase 1-like [Vitis vinifera] >gi|297740083|emb|CBI30265.3| unnamed protein product [Vitis vinifera]","gi|359482323|ref|XM_002283117.2|","PREDICTED: Vitis vinifera uridine nucleosidase 1-like (LOC100266594), mRNA","sp|Q9SJM7|URH1_ARATH","Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2","COG1957","Inosine-uridine nucleoside N-ribohydrolase","K01240","pop:POPTR_717449","uridine nucleosidase [EC:3.2.2.3]","GO:0006218//uridine catabolic process;GO:0006152//purine nucleoside catabolic process","GO:0045437//uridine nucleosidase activity;GO:0047622//adenosine nucleosidase activity;GO:0072585//xanthosine nucleotidase activity;GO:0047724//inosine nucleosidase activity","GO:0005829//cytosol"]
[482,"CSE_Unigene12883","SW_Unigene15602","-","-","+(Mostly)",993,{"v":0.991,"d":"99.10%"},9,3,6,{"v":0.6091530000000001,"d":"0.609"},{"v":0.354572,"d":"0.3546"},"gi|225440825|ref|XP_002282116.1|","PREDICTED: abhydrolase domain-containing protein 11 [Vitis vinifera] >gi|297740142|emb|CBI30324.3| unnamed protein product [Vitis vinifera]","gi|225440824|ref|XM_002282080.1|","PREDICTED: Vitis vinifera abhydrolase domain-containing protein 11-like (LOC100256369), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","-","-","-","GO:0006635//fatty acid beta-oxidation;GO:0006886//intracellular protein transport;GO:0006505//GPI anchor metabolic process","GO:0016788//hydrolase activity, acting on ester bonds;GO:0005524//ATP binding","GO:0005739//mitochondrion;GO:0031227//intrinsic to endoplasmic reticulum membrane"]
[483,"CSE_Unigene10258","SW_Unigene8220","-","-","+(Mostly)",495,{"v":0.994,"d":"99.40%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225440807|ref|XP_002281866.1|","PREDICTED: peptidyl-prolyl cis-trans isomerase-like 1 [Vitis vinifera] >gi|297740153|emb|CBI30335.3| unnamed protein product [Vitis vinifera]","gi|359481617|ref|XM_002281830.2|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase-like 1 (LOC100264827), mRNA","sp|Q9FJX0|PPIL2_ARATH","Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K12733","vvi:100264827","peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization","GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0005829//cytosol"]
[484,"CSE_Unigene5028","SW_Unigene23236","-","-","+(Mostly)",1254,{"v":0.99,"d":"99.00%"},12,8,4,{"v":0.179242,"d":"0.179"},{"v":0.00412014,"d":"0.0041"},"gi|225440612|ref|XP_002273820.1|","PREDICTED: probable anion transporter 3, chloroplastic-like [Vitis vinifera]","gi|359482060|ref|XM_002273784.2|","PREDICTED: Vitis vinifera probable anion transporter 3, chloroplastic-like (LOC100245864), mRNA","sp|Q7XJR2|ANTR3_ARATH","Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2","COG0477","Permeases of the major facilitator superfamily","K08193","olu:OSTLU_2927","MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other","GO:0055085//transmembrane transport;GO:0006811//ion transport","GO:0005315//inorganic phosphate transmembrane transporter activity","GO:0031969//chloroplast membrane;GO:0016021//integral to membrane"]
[485,"CSE_CL5456_Contig2","SW_CL7643_Contig3","-","-","+(Mostly)",1533,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.168263,"d":"0.168"},{"v":0.038611,"d":"0.0386"},"gi|225440348|ref|XP_002270322.1|","PREDICTED: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase [Vitis vinifera] >gi|297740379|emb|CBI30561.3| unnamed protein product [Vitis vinifera]","gi|225440347|ref|XM_002270286.1|","PREDICTED: Vitis vinifera dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase-like (LOC100249516), mRNA","-","-","-","-","K03850","vvi:100249516","alpha-1,2-glucosyltransferase [EC:2.4.1.256]","GO:0048366//leaf development;GO:0009651//response to salt stress;GO:0006487//protein N-linked glycosylation","GO:0046527//glucosyltransferase activity","GO:0016021//integral to membrane;GO:0005783//endoplasmic reticulum"]
[486,"CSE_Unigene10397","SW_Unigene13736","-","-","+(Mostly)",474,{"v":0.979,"d":"97.90%"},10,6,4,{"v":0.219613,"d":"0.220"},{"v":0.020056,"d":"0.0201"},"gi|225443174|ref|XP_002265564.1|","PREDICTED: probable methylene-fatty-acyl-phospholipid synthase [Vitis vinifera] >gi|298204671|emb|CBI25169.3| unnamed protein product [Vitis vinifera]","gi|225443173|ref|XM_002265528.1|","PREDICTED: Vitis vinifera probable methylene-fatty-acyl-phospholipid synthase-like (LOC100258621), mRNA","-","-","-","-","-","-","-","GO:0008654//phospholipid biosynthetic process;GO:0032259//methylation","GO:0000773//phosphatidyl-N-methylethanolamine N-methyltransferase activity;GO:0080101//phosphatidyl-N-dimethylethanolamine N-methyltransferase activity","GO:0009507//chloroplast"]
[487,"CSE_CL7038_Contig1","SW_Unigene20338","-","-","+(Mostly)",1134,{"v":0.986,"d":"98.60%"},16,11,5,{"v":0.152447,"d":"0.152"},{"v":0.000331618,"d":"0.0003"},"gi|225443166|ref|XP_002264352.1|","PREDICTED: uncharacterized protein LOC100263772 [Vitis vinifera]","gi|359483161|ref|XM_002264316.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263772 (LOC100263772), mRNA","-","-","-","-","-","-","-","GO:0016226//iron-sulfur cluster assembly;GO:0010207//photosystem II assembly;GO:0009073//aromatic amino acid family biosynthetic process","-","GO:0009571//proplastid stroma;GO:0009570//chloroplast stroma"]
[488,"CSE_Unigene15226","SW_Unigene21511","-","-","+(Mostly)",1248,{"v":0.991,"d":"99.10%"},11,8,3,{"v":0.151204,"d":"0.151"},{"v":0.00327733,"d":"0.0033"},"gi|225443227|ref|XP_002270610.1|","PREDICTED: probable serine incorporator [Vitis vinifera] >gi|298204750|emb|CBI25248.3| unnamed protein product [Vitis vinifera]","gi|359483131|ref|XM_002270574.2|","PREDICTED: Vitis vinifera probable serine incorporator-like (LOC100262087), mRNA","-","-","-","-","-","-","-","GO:0006623//protein targeting to vacuole;GO:0016192//vesicle-mediated transport","-","GO:0016020//membrane;GO:0009536//plastid"]
[489,"CSE_Unigene16853","SW_CL5523_Contig3","-","-","+(Mostly)",831,{"v":0.989,"d":"98.90%"},9,5,4,{"v":0.324573,"d":"0.325"},{"v":0.0862815,"d":"0.0863"},"gi|359483143|ref|XP_003632910.1|","PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic-like [Vitis vinifera] >gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]","gi|349731426|emb|FQ394547.1|","Vitis vinifera clone SS0AFA20YB04","sp|Q0J709|UP12_ORYSJ","Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2","COG5080","Rab GTPase interacting factor, Golgi membrane protein","-","-","-","GO:0009744//response to sucrose stimulus;GO:0019684//photosynthesis, light reaction;GO:0009750//response to fructose stimulus;GO:0009651//response to salt stress;GO:0042742//defense response to bacterium;GO:0009416//response to light stimulus;GO:0009409//response to cold;GO:0006833//water transport;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport","-","GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane;GO:0009570//chloroplast stroma;GO:0010319//stromule"]
[490,"CSE_Unigene16186","SW_Unigene16753","-","-","+(Mostly)",972,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.336701,"d":"0.337"},{"v":0.261858,"d":"0.2619"},"gi|225443292|ref|XP_002274572.1|","PREDICTED: uncharacterized protein LOC100260424 [Vitis vinifera]","gi|359483151|ref|XM_002274536.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260424 (LOC100260424), mRNA","-","-","-","-","-","-","-","GO:0009767//photosynthetic electron transport chain;GO:0009791//post-embryonic development;GO:0070455//positive regulation of heme biosynthetic process","GO:0043495//protein anchor;GO:0016491//oxidoreductase activity;GO:0010181//FMN binding","GO:0009534//chloroplast thylakoid;GO:0009570//chloroplast stroma"]
[491,"CSE_Unigene8542","SW_Unigene14467","-","-","+(Mostly)",675,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.159551,"d":"0.160"},{"v":0,"d":"0.0000"},"gi|297742953|emb|CBI35820.3|","unnamed protein product [Vitis vinifera]","gi|225442027|ref|XM_002268870.1|","PREDICTED: Vitis vinifera probable complex I intermediate-associated protein 30-like, transcript variant 1 (LOC100256635), mRNA","sp|Q9LQI7|CIA30_ARATH","Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2","COG0702","Predicted nucleoside-diphosphate-sugar epimerases","-","-","-","GO:0009736//cytokinin mediated signaling pathway","-","GO:0005739//mitochondrion"]
[492,"CSE_Unigene15788","SW_Unigene18710","-","-","+(Mostly)",2631,{"v":0.993,"d":"99.30%"},19,15,4,{"v":0.0940575,"d":"0.094"},{"v":2.37201e-06,"d":"0.0000"},"gi|297742971|emb|CBI35838.3|","unnamed protein product [Vitis vinifera]","gi|225442057|ref|XR_077686.1|","PREDICTED: Vitis vinifera uncharacterized LOC100242984 (LOC100242984), miscRNA","-","-","-","-","K14301","pop:POPTR_745842","nuclear pore complex protein Nup107","GO:0006810//transport","GO:0005515//protein binding","GO:0005643//nuclear pore"]
[493,"CSE_CL5779_Contig1","SW_Unigene8476","-","-","+(Mostly)",765,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225442349|ref|XP_002281163.1|","PREDICTED: RWD domain-containing protein 1-like [Vitis vinifera]","gi|359482863|ref|XM_002281127.2|","PREDICTED: Vitis vinifera RWD domain-containing protein 1-like (LOC100267005), mRNA","sp|Q9LX30|GCN2_ARATH","Probable serine/threonine-protein kinase GCN2 OS=Arabidopsis thaliana GN=GCN2 PE=2 SV=2","-","-","K11323","vcn:VOLCADRAFT_121342","histone arginine demethylase JMJD6 [EC:1.14.11.-]","-","-","GO:0005737//cytoplasm"]
[494,"CSE_Unigene1841","SW_Unigene17487","-","-","+(Mostly)",1356,{"v":0.99,"d":"99.00%"},13,6,7,{"v":0.345946,"d":"0.346"},{"v":0.0563396,"d":"0.0563"},"gi|359482890|ref|XP_002283628.2|","PREDICTED: proline-rich receptor-like protein kinase PERK10-like [Vitis vinifera]","gi|359482889|ref|XM_002283592.2|","PREDICTED: Vitis vinifera proline-rich receptor-like protein kinase PERK10-like (LOC100256626), mRNA","sp|F4IB81|LYK3_ARATH","LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana GN=LYK3 PE=2 SV=1","COG0515","Serine/threonine protein kinase","K13429","ppp:PHYPADRAFT_1279","chitin elicitor receptor kinase 1","GO:0006468//protein phosphorylation;GO:0007020//microtubule nucleation;GO:0016998//cell wall macromolecule catabolic process","GO:0004715//non-membrane spanning protein tyrosine kinase activity;GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity","GO:0005886//plasma membrane"]
[495,"CSE_Unigene6821","SW_Unigene24549","-","-","+(Mostly)",588,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|359482329|ref|XP_003632756.1|","PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis vinifera] >gi|297743415|emb|CBI36282.3| unnamed protein product [Vitis vinifera]","gi|359482328|ref|XM_003632708.1|","PREDICTED: Vitis vinifera DNA replication complex GINS protein PSF1-like (LOC100256728), mRNA","-","-","COG5230","Uncharacterized conserved protein","K10732","vvi:100256728","GINS complex subunit 1","GO:0006270//DNA replication initiation","-","GO:0000811//GINS complex;GO:0009507//chloroplast"]
[496,"CSE_CL2319_Contig2","SW_CL5327_Contig3","-","-","+(Mostly)",813,{"v":0.877,"d":"87.70%"},76,{"v":27.695,"d":"28"},{"v":48.305,"d":"48"},{"v":0.678018,"d":"0.678"},{"v":0.111035,"d":"0.1110"},"gi|225442881|ref|XP_002281834.1|","PREDICTED: peptide deformylase 1A, chloroplastic [Vitis vinifera] >gi|297743418|emb|CBI36285.3| unnamed protein product [Vitis vinifera]","gi|225442880|ref|XM_002281798.1|","PREDICTED: Vitis vinifera peptide deformylase 1A, chloroplastic-like (LOC100258283), mRNA","sp|Q9FUZ0|DEF1A_SOLLC","Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum GN=PDF1A PE=2 SV=1","COG0242","N-formylmethionyl-tRNA deformylase","K01462","vvi:100258283","peptide deformylase [EC:3.5.1.88]","GO:0043686//co-translational protein modification;GO:0006412//translation","GO:0005506//iron ion binding;GO:0042586//peptide deformylase activity","GO:0009505//plant-type cell wall;GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[497,"CSE_Unigene13832","SW_Unigene23278","-","-","+(Mostly)",1479,{"v":0.993,"d":"99.30%"},11,9,2,{"v":0.0658921,"d":"0.066"},{"v":6.35717e-05,"d":"0.0001"},"gi|225443035|ref|XP_002268792.1|","PREDICTED: sodium-coupled neutral amino acid transporter 4 [Vitis vinifera]","gi|147827329|emb|AM481844.2|","Vitis vinifera contig VV78X104973.15, whole genome shotgun sequence","sp|O22719|LHTL3_ARATH","Lysine histidine transporter-like 3 OS=Arabidopsis thaliana GN=At1g61270 PE=3 SV=2","COG0814","Amino acid permeases","K14207","rcu:RCOM_0012320","solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2","GO:0006865//amino acid transport","GO:0015171//amino acid transmembrane transporter activity","GO:0016021//integral to membrane;GO:0005886//plasma membrane"]
[498,"CSE_Unigene10714","SW_Unigene8045","-","-","+(Mostly)",474,{"v":0.992,"d":"99.20%"},4,3,1,{"v":0.123398,"d":"0.123"},{"v":0.0587034,"d":"0.0587"},"gi|225443379|ref|XP_002266544.1|","PREDICTED: reticulon-like protein B22 [Vitis vinifera] >gi|297735759|emb|CBI18446.3| unnamed protein product [Vitis vinifera]","gi|225443378|ref|XM_002266508.1|","PREDICTED: Vitis vinifera reticulon-like protein B22 (LOC100259765), mRNA","sp|Q8GWH5|RTNLT_ARATH","Reticulon-like protein B22 OS=Arabidopsis thaliana GN=RTNLB22 PE=2 SV=1","-","-","K07748","pop:POPTR_1081290","sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170]","-","-","GO:0005739//mitochondrion;GO:0005783//endoplasmic reticulum"]
[499,"CSE_Unigene16685","SW_Unigene16221","-","-","+(Mostly)",1383,{"v":0.99,"d":"99.00%"},14,8,6,{"v":0.264969,"d":"0.265"},{"v":0.0141314,"d":"0.0141"},"gi|225443326|ref|XP_002262765.1|","PREDICTED: metal tolerance protein C4 [Vitis vinifera] >gi|297735796|emb|CBI18483.3| unnamed protein product [Vitis vinifera]","gi|359483241|ref|XM_002262729.2|","PREDICTED: Vitis vinifera metal tolerance protein C4-like (LOC100256503), mRNA","sp|Q8H1G3|MTPC4_ARATH","Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1","COG0053","Predicted Co/Zn/Cd cation transporters","K14696","vvi:100256503","solute carrier family 30 (zinc transporter), member 9","GO:0006812//cation transport;GO:0055085//transmembrane transport","GO:0015562//efflux transmembrane transporter activity;GO:0008324//cation transmembrane transporter activity","GO:0016021//integral to membrane"]
[500,"CSE_CL1467_Contig5","SW_CL3708_Contig2","-","-","+(Mostly)",1665,{"v":0.989,"d":"98.90%"},19,6,13,{"v":0.818254,"d":"0.818"},{"v":0.793953,"d":"0.7940"},"gi|302144089|emb|CBI23194.3|","unnamed protein product [Vitis vinifera]","gi|359483386|ref|XM_002264378.2|","PREDICTED: Vitis vinifera malonyl-CoA decarboxylase, mitochondrial-like (LOC100246958), mRNA","-","-","COG1593","TRAP-type C4-dicarboxylate transport system, large permease component","K01578","vvi:100246958","malonyl-CoA decarboxylase [EC:4.1.1.9]","GO:0006633//fatty acid biosynthetic process","GO:0050080//malonyl-CoA decarboxylase activity","GO:0005777//peroxisome"]
[501,"CSE_CL7152_Contig1","SW_Unigene6793","-","-","+(Mostly)",1368,{"v":0.99,"d":"99.00%"},13,11,2,{"v":0.0627916,"d":"0.063"},{"v":1.59659e-05,"d":"0.0000"},"gi|302144145|emb|CBI23250.3|","unnamed protein product [Vitis vinifera]","gi|225444506|ref|XM_002268645.1|","PREDICTED: Vitis vinifera uncharacterized LOC100255582 (LOC100255582), mRNA","sp|Q8GUI4|UGPI6_ARATH","Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1","-","-","-","-","-","-","-","GO:0046658//anchored to plasma membrane;GO:0009506//plasmodesma;GO:0005739//mitochondrion"]
[502,"CSE_Unigene1196","SW_Unigene12189","-","-","+(Mostly)",1857,{"v":0.994,"d":"99.40%"},11,8,3,{"v":0.11254,"d":"0.113"},{"v":0.000690198,"d":"0.0007"},"gi|359483663|ref|XP_002279791.2|","PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Vitis vinifera] >gi|297740416|emb|CBI30598.3| unnamed protein product [Vitis vinifera]","gi|147799251|emb|AM463041.2|","Vitis vinifera contig VV78X003963.8, whole genome shotgun sequence","sp|Q9FN94|RLK7_ARATH","Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1","COG4886","Leucine-rich repeat (LRR) protein","K13420","vvi:100253808","LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]","GO:0016310//phosphorylation;GO:0007165//signal transduction","GO:0016301//kinase activity","GO:0005768//endosome;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane;GO:0005802//trans-Golgi network"]
[503,"CSE_Unigene490","SW_Unigene1362","-","-","+(Mostly)",843,{"v":0.993,"d":"99.30%"},6,3,3,{"v":0.269191,"d":"0.269"},{"v":0.115649,"d":"0.1156"},"gi|297740592|emb|CBI30774.3|","unnamed protein product [Vitis vinifera]","gi|349715194|emb|FQ380496.1|","Vitis vinifera clone SS0ACG55YI17","sp|Q2V3H0|PP322_ARATH","Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana GN=At4g18975 PE=2 SV=2","-","-","-","-","-","-","-","GO:0009507//chloroplast"]
[504,"CSE_Unigene11486","SW_Unigene7062","-","-","+(Mostly)",630,{"v":0.983,"d":"98.30%"},11,6,5,{"v":0.398681,"d":"0.399"},{"v":0.177866,"d":"0.1779"},"gi|225463388|ref|XP_002273366.1|","PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera] >gi|297740634|emb|CBI30816.3| unnamed protein product [Vitis vinifera]","gi|225463387|ref|XM_002273330.1|","PREDICTED: Vitis vinifera uncharacterized LOC100265908 (LOC100265908), mRNA","sp|Q94AL8|CRIM1_ARATH","Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana GN=COR413IM1 PE=1 SV=1","-","-","-","-","-","GO:0009269//response to desiccation;GO:0042538//hyperosmotic salinity response;GO:0042631//cellular response to water deprivation;GO:0009737//response to abscisic acid stimulus;GO:0009631//cold acclimation;GO:0070417//cellular response to cold;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport","-","GO:0031357//integral to chloroplast inner membrane;GO:0009535//chloroplast thylakoid membrane"]
[505,"CSE_CL4980_Contig1","SW_CL5878_Contig1","-","-","+(Mostly)",522,{"v":0.992,"d":"99.20%"},4,2,2,{"v":0.329653,"d":"0.330"},{"v":0.256005,"d":"0.2560"},"gi|225463454|ref|XP_002275908.1|","PREDICTED: high mobility group B protein 14 [Vitis vinifera] >gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]","gi|349711459|emb|FQ379078.1|","Vitis vinifera clone SS0AEB11YI17","sp|O64702|HMG14_ARATH","High mobility group B protein 14 OS=Arabidopsis thaliana GN=HMGB14 PE=2 SV=2","COG5648","Chromatin-associated proteins containing the HMG domain","K10802","vvi:100256381","high mobility group protein B1","GO:0006333//chromatin assembly or disassembly","GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0005634//nucleus;GO:0009536//plastid"]
[506,"CSE_Unigene14413","SW_CL6462_Contig1","-","-","+(Mostly)",1917,{"v":0.994,"d":"99.40%"},12,7,5,{"v":0.217576,"d":"0.218"},{"v":0.00993988,"d":"0.0099"},"gi|225444543|ref|XP_002275664.1|","PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3-like [Vitis vinifera]","gi|359483862|ref|XM_002275628.2|","PREDICTED: Vitis vinifera mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3-like (LOC100243430), mRNA","sp|Q93Y37|MNS3_ARATH","Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 OS=Arabidopsis thaliana GN=MNS3 PE=2 SV=1","-","-","K01230","vvi:100243430","mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]","GO:0006491//N-glycan processing;GO:0048364//root development;GO:0043090//amino acid import;GO:0006888//ER to Golgi vesicle-mediated transport","GO:0005509//calcium ion binding;GO:0004571//mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","GO:0005768//endosome;GO:0005802//trans-Golgi network;GO:0016020//membrane;GO:0005794//Golgi apparatus"]
[507,"CSE_Unigene15727","SW_Unigene18546","-","-","+(Mostly)",2172,{"v":0.987,"d":"98.70%"},29,{"v":13.751,"d":"14"},{"v":15.249,"d":"15"},{"v":0.467893,"d":"0.468"},{"v":0.0394889,"d":"0.0395"},"gi|225443962|ref|XP_002280109.1|","PREDICTED: uncharacterized membrane protein C24H6.13-like [Vitis vinifera]","gi|225443961|ref|XM_002280073.1|","PREDICTED: Vitis vinifera uncharacterized LOC100260008 (LOC100260008), mRNA","-","-","COG5594","Uncharacterized integral membrane protein","K03021","ota:Ot01g06000","DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]","-","-","GO:0009941//chloroplast envelope;GO:0009506//plasmodesma;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005886//plasma membrane;GO:0005774//vacuolar membrane;GO:0005576//extracellular region"]
[508,"CSE_CL2892_Contig2","SW_CL6960_Contig1","-","-","+(Mostly)",867,{"v":0.993,"d":"99.30%"},6,4,2,{"v":0.161794,"d":"0.162"},{"v":0.035016,"d":"0.0350"},"gi|359483478|ref|XP_002269427.2|","PREDICTED: uncharacterized oxidoreductase C663.09c-like [Vitis vinifera] >gi|297740911|emb|CBI31093.3| unnamed protein product [Vitis vinifera]","gi|359483477|ref|XM_002269391.2|","PREDICTED: Vitis vinifera uncharacterized LOC100247377 (LOC100247377), mRNA","sp|A2RVM0|TIC32_ARATH","Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1","COG1028","Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)","K09841","bdi:100827045","xanthoxin dehydrogenase [EC:1.1.1.288]","GO:0019252//starch biosynthetic process;GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity;GO:0000166//nucleotide binding","GO:0009507//chloroplast"]
[509,"CSE_CL4798_Contig1","SW_CL2131_Contig2","-","-","+(Mostly)",882,{"v":0.985,"d":"98.50%"},13,8,5,{"v":0.171802,"d":"0.172"},{"v":0.0021882,"d":"0.0022"},"gi|296085263|emb|CBI28995.3|","unnamed protein product [Vitis vinifera]","gi|225462550|ref|XM_002267363.1|","PREDICTED: Vitis vinifera superoxide dismutase [Fe], chloroplastic-like (LOC100263457), mRNA","sp|Q9FMX0|SODF3_ARATH","Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana GN=FSD3 PE=1 SV=1","COG0605","Superoxide dismutase","K04564","pop:POPTR_253123","superoxide dismutase, Fe-Mn family [EC:1.15.1.1]","GO:0019430//removal of superoxide radicals;GO:0055114//oxidation-reduction process","GO:0046872//metal ion binding;GO:0005515//protein binding;GO:0004784//superoxide dismutase activity","GO:0042644//chloroplast nucleoid;GO:0009579//thylakoid"]
[510,"CSE_Unigene778","SW_Unigene8357","-","-","+(Mostly)",453,{"v":0.987,"d":"98.70%"},6,3,3,{"v":0.397558,"d":"0.398"},{"v":0.228978,"d":"0.2290"},"gi|225462560|ref|XP_002267649.1|","PREDICTED: probable prefoldin subunit 5 [Vitis vinifera] >gi|147795534|emb|CAN63324.1| hypothetical protein VITISV_018866 [Vitis vinifera]","gi|349708281|emb|FQ378288.1|","Vitis vinifera clone SS0AEB13YP24","sp|P57742|PFD5_ARATH","Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=1 SV=1","COG1730","Predicted prefoldin, molecular chaperone implicated in de novo protein folding","K04797","vvi:100243012","prefoldin alpha subunit","GO:0006457//protein folding","GO:0051082//unfolded protein binding","GO:0016272//prefoldin complex"]
[511,"CSE_Unigene19673","SW_Unigene10620","-","-","+(Mostly)",1569,{"v":0.995,"d":"99.50%"},8,5,3,{"v":0.180549,"d":"0.181"},{"v":0.0198083,"d":"0.0198"},"gi|225465698|ref|XP_002273428.1|","PREDICTED: uncharacterized protein LOC100263135 [Vitis vinifera]","gi|359484036|ref|XM_002273392.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263135 (LOC100263135), mRNA","sp|Q9SKC3|ARI9_ARATH","Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana GN=ARI9 PE=2 SV=1","-","-","K11975","smo:SELMODRAFT_48577","E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19]","-","GO:0003676//nucleic acid binding;GO:0008270//zinc ion binding;GO:0016874//ligase activity","GO:0005634//nucleus"]
[512,"CSE_CL7541_Contig1","SW_CL133_Contig2","-","-","+(Mostly)",1212,{"v":0.984,"d":"98.40%"},19,13,6,{"v":0.190184,"d":"0.190"},{"v":0.0005183,"d":"0.0005"},"gi|225463807|ref|XP_002270791.1|","PREDICTED: alpha-galactosidase [Vitis vinifera] >gi|297742709|emb|CBI35343.3| unnamed protein product [Vitis vinifera]","gi|225463806|ref|XM_002270755.1|","PREDICTED: Vitis vinifera alpha-galactosidase-like (LOC100245638), mRNA","sp|Q42656|AGAL_COFAR","Alpha-galactosidase OS=Coffea arabica PE=1 SV=1","-","-","K07407","vvi:100245638","alpha-galactosidase [EC:3.2.1.22]","GO:0046477//glycosylceramide catabolic process;GO:0009311//oligosaccharide metabolic process;GO:0016139//glycoside catabolic process","GO:0052692//raffinose alpha-galactosidase activity","GO:0009505//plant-type cell wall;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0048046//apoplast"]
[513,"CSE_Unigene2047","SW_Unigene22871","-","-","+(Mostly)",1119,{"v":0.991,"d":"99.10%"},10,6,4,{"v":0.157654,"d":"0.158"},{"v":0.00519848,"d":"0.0052"},"gi|225463758|ref|XP_002267285.1|","PREDICTED: calumenin [Vitis vinifera] >gi|297742738|emb|CBI35372.3| unnamed protein product [Vitis vinifera]","gi|359484120|ref|XM_002267249.2|","PREDICTED: Vitis vinifera calumenin-like (LOC100262960), mRNA","sp|Q948R0|CML5_ORYSJ","Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1","-","-","K13448","ath:AT3G59440","calcium-binding protein CML","GO:0034968//histone lysine methylation;GO:0009909//regulation of flower development;GO:0007165//signal transduction","GO:0005509//calcium ion binding","GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane"]
[514,"CSE_Unigene12672","SW_Unigene7406","-","-","+(Mostly)",867,{"v":0.982,"d":"98.20%"},13,8,5,{"v":0.263456,"d":"0.263"},{"v":0.017688,"d":"0.0177"},"gi|297742760|emb|CBI35394.3|","unnamed protein product [Vitis vinifera]","gi|359484180|ref|XM_002273357.2|","PREDICTED: Vitis vinifera riboflavin biosynthesis protein ribF-like (LOC100254929), mRNA","-","-","COG0196","FAD synthase","-","-","-","GO:0009231//riboflavin biosynthetic process;GO:0032259//methylation","GO:0003919//FMN adenylyltransferase activity;GO:0008168//methyltransferase activity","GO:0005634//nucleus"]
[515,"CSE_CL3214_Contig4","SW_CL2492_Contig2","-","-","+(Mostly)",981,{"v":0.988,"d":"98.80%"},9,7,2,{"v":0.0874521,"d":"0.087"},{"v":0.000914101,"d":"0.0009"},"gi|296090301|emb|CBI40120.3|","unnamed protein product [Vitis vinifera]","gi|359484976|ref|XM_002266781.2|","PREDICTED: Vitis vinifera metaxin-2-like (LOC100267718), mRNA","sp|O64471|MTX_ARATH","Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1","-","-","-","-","-","GO:0006606//protein import into nucleus;GO:0006626//protein targeting to mitochondrion;GO:0051604//protein maturation;GO:0006406//mRNA export from nucleus","GO:0005515//protein binding","GO:0005743//mitochondrial inner membrane;GO:0009536//plastid;GO:0005741//mitochondrial outer membrane;GO:0005634//nucleus"]
[516,"CSE_Unigene20542","SW_Unigene6085","-","-","+(Mostly)",1542,{"v":0.996,"d":"99.60%"},6,3,3,{"v":0.3781,"d":"0.378"},{"v":0.210143,"d":"0.2101"},"gi|147804692|emb|CAN62615.1|","hypothetical protein VITISV_036164 [Vitis vinifera]","gi|359484742|ref|XM_002263582.2|","PREDICTED: Vitis vinifera probable leucine-rich repeat receptor-like protein kinase At4g00330-like (LOC100250654), mRNA","sp|Q9ASQ5|CRCK3_ARATH","Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana GN=CRCK3 PE=2 SV=1","COG0515","Serine/threonine protein kinase","K04733","aly:ARALYDRAFT_916421","interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]","GO:0006468//protein phosphorylation;GO:0031348//negative regulation of defense response;GO:0009627//systemic acquired resistance;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009863//salicylic acid mediated signaling pathway;GO:0009697//salicylic acid biosynthetic process","GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0004715//non-membrane spanning protein tyrosine kinase activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005886//plasma membrane"]
[517,"CSE_CL322_Contig1","SW_Unigene22699","-","-","+(Mostly)",762,{"v":0.988,"d":"98.80%"},9,5,4,{"v":0.241429,"d":"0.241"},{"v":0.0375288,"d":"0.0375"},"gi|147822285|emb|CAN72910.1|","hypothetical protein VITISV_018847 [Vitis vinifera]","gi|349720493|emb|FQ381740.1|","Vitis vinifera clone SS0ABG86YB13","-","-","COG5474","Uncharacterized conserved protein","-","-","-","GO:0016226//iron-sulfur cluster assembly;GO:0010275//NAD(P)H dehydrogenase complex assembly;GO:0009073//aromatic amino acid family biosynthetic process","-","GO:0005739//mitochondrion;GO:0009535//chloroplast thylakoid membrane;GO:0009570//chloroplast stroma;GO:0005634//nucleus"]
[518,"CSE_Unigene12276","SW_Unigene14453","-","-","+(Mostly)",654,{"v":0.983,"d":"98.30%"},5,2,3,{"v":0.562515,"d":"0.563"},{"v":0.415099,"d":"0.4151"},"gi|342160856|gb|AEL16464.1|","peroxiredoxin Q [Vitis vinifera]","gi|349703575|emb|FQ383514.1|","Vitis vinifera clone SS0ABG1YK11","sp|Q6QPJ6|PRXQ_POPJC","Peroxiredoxin Q, chloroplastic OS=Populus jackii GN=PRXQ PE=1 SV=1","COG1225","Peroxiredoxin","K03564","vvi:100250698","peroxiredoxin Q/BCP [EC:1.11.1.15]","GO:0055114//oxidation-reduction process","GO:0004601//peroxidase activity;GO:0051920//peroxiredoxin activity","GO:0009533//chloroplast stromal thylakoid;GO:0010287//plastoglobule;GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane"]
[519,"CSE_Unigene13739","SW_Unigene16603","-","-","+(Mostly)",1947,{"v":0.99,"d":"99.00%"},19,12,7,{"v":0.214555,"d":"0.215"},{"v":0.00105381,"d":"0.0011"},"gi|225444667|ref|XP_002277280.1|","PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis vinifera] >gi|297738533|emb|CBI27778.3| unnamed protein product [Vitis vinifera]","gi|225444666|ref|XM_002277244.1|","PREDICTED: Vitis vinifera chlorophyll a-b binding protein, chloroplastic-like (LOC100243962), mRNA","sp|P10708|CB12_SOLLC","Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1","-","-","K08908","vvi:100243962","light-harvesting complex I chlorophyll a/b binding protein 2","GO:0010155//regulation of proton transport;GO:0006098//pentose-phosphate shunt;GO:0010218//response to far red light;GO:0009744//response to sucrose stimulus;GO:0010114//response to red light;GO:0030003//cellular cation homeostasis;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009765//photosynthesis, light harvesting;GO:0009637//response to blue light;GO:0009644//response to high light intensity;GO:0070838//divalent metal ion transport;GO:0019761//glucosinolate biosynthetic process;GO:0006364//rRNA processing","GO:0046872//metal ion binding;GO:0016168//chlorophyll binding","GO:0016020//membrane;GO:0009507//chloroplast;GO:0030076//light-harvesting complex"]
[520,"CSE_Unigene911","SW_Unigene16193","-","-","+(Mostly)",1191,{"v":0.975,"d":"97.50%"},24,{"v":12.8368,"d":"13"},{"v":11.1632,"d":"11"},{"v":0.270752,"d":"0.271"},{"v":0.00136,"d":"0.0014"},"gi|383216818|gb|AFG73688.1|","12-oxophytodienoate reductase 3 protein [Vitis vinifera]","gi|359484433|ref|XM_002279277.2|","PREDICTED: Vitis vinifera 12-oxophytodienoate reductase 3-like (LOC100262732), mRNA","sp|Q9FEW9|OPR3_SOLLC","12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1","COG1902","NADH:flavin oxidoreductases, Old Yellow Enzyme family","K05894","osa:4345762","12-oxophytodienoic acid reductase [EC:1.3.1.42]","GO:0010193//response to ozone;GO:0055114//oxidation-reduction process;GO:0009620//response to fungus;GO:0009611//response to wounding;GO:0009695//jasmonic acid biosynthetic process;GO:0031408//oxylipin biosynthetic process","GO:0016629//12-oxophytodienoate reductase activity;GO:0010181//FMN binding","GO:0005829//cytosol;GO:0005777//peroxisome"]
[521,"CSE_Unigene17928","SW_Unigene17676","-","-","+(Mostly)",3270,{"v":0.991,"d":"99.10%"},27,21,6,{"v":0.118446,"d":"0.118"},{"v":2.9689e-07,"d":"0.0000"},"gi|359484435|ref|XP_002279485.2|","PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis vinifera] >gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]","gi|359484434|ref|XM_002279449.2|","PREDICTED: Vitis vinifera RNA polymerase-associated protein CTR9 homolog (LOC100252478), mRNA","sp|Q8RVB2|SPY_SOLLC","Probable UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase SPINDLY OS=Solanum lycopersicum GN=SPY PE=2 SV=1","COG0457","FOG: TPR repeat","K15176","vvi:100252478","RNA polymerase-associated protein CTR9","GO:0009630//gravitropism;GO:0006346//methylation-dependent chromatin silencing;GO:0031048//chromatin silencing by small RNA;GO:0007131//reciprocal meiotic recombination;GO:0051567//histone H3-K9 methylation;GO:0016579//protein deubiquitination;GO:0009910//negative regulation of flower development;GO:0010638//positive regulation of organelle organization;GO:0033044//regulation of chromosome organization;GO:0030422//production of siRNA involved in RNA interference;GO:0010388//cullin deneddylation;GO:0009640//photomorphogenesis;GO:0010090//trichome morphogenesis;GO:0008284//positive regulation of cell proliferation;GO:0006306//DNA methylation;GO:0016567//protein ubiquitination;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0016572//histone phosphorylation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0043687//post-translational protein modification;GO:0000398//mRNA splicing, via spliceosome","-","GO:0016020//membrane;GO:0005634//nucleus"]
[522,"CSE_Unigene16534","SW_Unigene21836","-","-","+(Mostly)",951,{"v":0.993,"d":"99.30%"},7,6,1,{"v":0.0584326,"d":"0.058"},{"v":0.00162664,"d":"0.0016"},"gi|359484451|ref|XP_002280213.2|","PREDICTED: protein bem46-like [Vitis vinifera] >gi|297738598|emb|CBI27843.3| unnamed protein product [Vitis vinifera]","gi|359484450|ref|XM_002280177.2|","PREDICTED: Vitis vinifera protein bem46-like (LOC100245712), mRNA","-","-","COG1073","Hydrolases of the alpha/beta superfamily","K06889","pop:POPTR_1105469",null,"GO:0009958//positive gravitropism;GO:0048364//root development;GO:0009638//phototropism;GO:0048573//photoperiodism, flowering;GO:0006508//proteolysis;GO:0009415//response to water stimulus","GO:0008236//serine-type peptidase activity","GO:0019866//organelle inner membrane;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005773//vacuole;GO:0005783//endoplasmic reticulum;GO:0005634//nucleus;GO:0005886//plasma membrane;GO:0048046//apoplast"]
[523,"CSE_Unigene14366","SW_Unigene10316","-","-","+(Mostly)",963,{"v":0.993,"d":"99.30%"},7,7,"NA",{"v":0,"d":"0.000"},"NA","gi|225444830|ref|XP_002280723.1|","PREDICTED: WD repeat-containing protein 61 [Vitis vinifera] >gi|297738621|emb|CBI27866.3| unnamed protein product [Vitis vinifera]","gi|359484456|ref|XM_002280687.2|","PREDICTED: Vitis vinifera WD repeat-containing protein 61-like (LOC100257752), mRNA","sp|O22212|PRP4L_ARATH","U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1","COG2319","FOG: WD40 repeat","K12602","vvi:100257752","WD repeat-containing protein 61","GO:0009910//negative regulation of flower development;GO:0051568//histone H3-K4 methylation;GO:0010452//histone H3-K36 methylation","GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0005829//cytosol;GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005834//heterotrimeric G-protein complex"]
[524,"CSE_Unigene15178","SW_CL7929_Contig2","-","-","+(Mostly)",960,{"v":0.991,"d":"99.10%"},9,4,5,{"v":0.356019,"d":"0.356"},{"v":0.118855,"d":"0.1189"},"gi|225444834|ref|XP_002280767.1|","PREDICTED: uncharacterized protein LOC100252615 [Vitis vinifera]","gi|359484457|ref|XM_002280731.2|","PREDICTED: Vitis vinifera uncharacterized LOC100252615 (LOC100252615), mRNA","-","-","-","-","K15263","vvi:100252615","cell growth-regulating nucleolar protein","GO:0006626//protein targeting to mitochondrion","-","GO:0005622//intracellular"]
[525,"CSE_Unigene14374","SW_Unigene16739","-","-","+(Mostly)",663,{"v":0.982,"d":"98.20%"},12,3,9,{"v":1.04184,"d":"1.042"},{"v":0.972969,"d":"0.9730"},"gi|225444859|ref|XP_002281164.1|","PREDICTED: lycopene epsilon cyclase, chloroplastic [Vitis vinifera]","gi|359484467|ref|XM_002281128.2|","PREDICTED: Vitis vinifera lycopene epsilon cyclase, chloroplastic-like (LOC100259482), mRNA","sp|O65837|LCYE_SOLLC","Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1","-","-","K06444","vvi:100259482","lycopene epsilon-cyclase [EC:5.5.1.18]","GO:0016117//carotenoid biosynthetic process","GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016853//isomerase activity","GO:0009507//chloroplast"]
[526,"CSE_Unigene19920","SW_Unigene12494","-","-","+(Mostly)",1737,{"v":0.994,"d":"99.40%"},11,8,3,{"v":0.128266,"d":"0.128"},{"v":0.00140927,"d":"0.0014"},"gi|225444879|ref|XP_002281475.1|","PREDICTED: regulatory protein NPR1 [Vitis vinifera] >gi|297738647|emb|CBI27892.3| unnamed protein product [Vitis vinifera]","gi|359484473|ref|XM_002281439.2|","PREDICTED: Vitis vinifera regulatory protein NPR1-like (LOC100250996), mRNA","sp|P93002|NPR1_ARATH","Regulatory protein NPR1 OS=Arabidopsis thaliana GN=NPR1 PE=1 SV=1","-","-","K14508","vvi:100250996","regulatory protein NPR1","GO:0031348//negative regulation of defense response;GO:0009611//response to wounding;GO:0010200//response to chitin;GO:0050832//defense response to fungus;GO:0009625//response to insect;GO:0008219//cell death;GO:0009408//response to heat","-","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[527,"CSE_Unigene11589","SW_Unigene6327","-","-","+(Mostly)",1695,{"v":0.992,"d":"99.20%"},14,5,9,{"v":0.787524,"d":"0.788"},{"v":0.765158,"d":"0.7652"},"gi|225444916|ref|XP_002279603.1|","PREDICTED: probable polyamine oxidase 5-like [Vitis vinifera]","gi|123663887|emb|AM464590.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X168410.7, clone ENTAV 115","sp|Q9SU79|PAO5_ARATH","Probable polyamine oxidase 5 OS=Arabidopsis thaliana GN=PAO5 PE=2 SV=1","-","-","K12259","gmx:100778778","spermine oxidase [EC:1.5.3.16]","GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity","-"]
[528,"CSE_Unigene21134","SW_Unigene22287","-","-","+(Mostly)",3528,{"v":0.989,"d":"98.90%"},40,16,24,{"v":0.497453,"d":"0.497"},{"v":0.0413385,"d":"0.0413"},"gi|225444993|ref|XP_002279892.1|","PREDICTED: uncharacterized protein LOC100256064 [Vitis vinifera] >gi|297738702|emb|CBI27947.3| unnamed protein product [Vitis vinifera]","gi|359484318|ref|XM_002279856.2|","PREDICTED: Vitis vinifera uncharacterized LOC100256064 (LOC100256064), mRNA","sp|Q7XTT4|NUCL2_ORYSJ","Nucleolin 2 OS=Oryza sativa subsp. japonica GN=Os04g0620700 PE=2 SV=2","COG0168","Trk-type K+ transport systems, membrane components","K03453","vcn:VOLCADRAFT_102664","bile acid:Na+ symporter, BASS family","-","-","-"]
[529,"CSE_Unigene19835","SW_Unigene18443","-","-","+(Mostly)",990,{"v":0.992,"d":"99.20%"},8,5,3,{"v":0.148601,"d":"0.149"},{"v":0.0102889,"d":"0.0103"},"gi|225445104|ref|XP_002283713.1|","PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like isoform 2 [Vitis vinifera]","gi|225445103|ref|XM_002283677.1|","PREDICTED: Vitis vinifera probable iron/ascorbate oxidoreductase DDB_G0283291-like, transcript variant 2 (LOC100244088), mRNA","sp|Q40062|IDS3_HORVU","2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3","COG3491","Isopenicillin N synthase and related dioxygenases","K06892","vvi:100244088",null,"GO:0051555//flavonol biosynthetic process;GO:0055114//oxidation-reduction process","GO:0045431//flavonol synthase activity;GO:0005506//iron ion binding;GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","-"]
[530,"CSE_Unigene4951","SW_Unigene17944","-","-","+(Mostly)",540,{"v":0.993,"d":"99.30%"},4,{"v":1.64994,"d":"2"},{"v":2.35006,"d":"2"},{"v":0.445208,"d":"0.445"},{"v":0.239637,"d":"0.2396"},"gi|225445190|ref|XP_002284205.1|","PREDICTED: rac-like GTP-binding protein ARAC7 isoform 1 [Vitis vinifera] >gi|147781539|emb|CAN73708.1| hypothetical protein VITISV_023715 [Vitis vinifera] >gi|297738799|emb|CBI28044.3| unnamed protein product [Vitis vinifera]","gi|359484568|ref|XM_002284169.2|","PREDICTED: Vitis vinifera rac-like GTP-binding protein ARAC7, transcript variant 1 (LOC100266265), mRNA","sp|O82480|RAC7_ARATH","Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana GN=ARAC7 PE=1 SV=1","COG1100","GTPase SAR1 and related small G proteins","K04392","vvi:100266265","Ras-related C3 botulinum toxin substrate 1","GO:0007015//actin filament organization;GO:0007264//small GTPase mediated signal transduction;GO:0006184//GTP catabolic process;GO:0015031//protein transport","GO:0004767//sphingomyelin phosphodiesterase activity;GO:0003924//GTPase activity;GO:0005525//GTP binding","GO:0005622//intracellular;GO:0005576//extracellular region;GO:0005886//plasma membrane"]
[531,"CSE_Unigene18168","SW_Unigene21911","-","-","+(Mostly)",1425,{"v":0.992,"d":"99.20%"},11,4,7,{"v":0.620019,"d":"0.620"},{"v":0.457556,"d":"0.4576"},"gi|225445192|ref|XP_002284217.1|","PREDICTED: cyclin-dependent kinase F-1 [Vitis vinifera]","gi|359484571|ref|XM_002284181.2|","PREDICTED: Vitis vinifera cyclin-dependent kinase F-1-like (LOC100261054), mRNA","sp|O80345|CDKF1_ARATH","Cyclin-dependent kinase F-1 OS=Arabidopsis thaliana GN=CDKF-1 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K02202","ota:Ot07g01260","cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]","GO:0000278//mitotic cell cycle;GO:0010078//maintenance of root meristem identity;GO:0010440//stomatal lineage progression;GO:0042023//DNA endoreduplication;GO:0045736//negative regulation of cyclin-dependent protein serine/threonine kinase activity","GO:0005515//protein binding;GO:0000166//nucleotide binding;GO:0004674//protein serine/threonine kinase activity;GO:0019912//cyclin-dependent protein kinase activating kinase activity","GO:0005829//cytosol;GO:0005634//nucleus"]
[532,"CSE_Unigene16174","SW_Unigene21434","-","-","+(Mostly)",1539,{"v":0.991,"d":"99.10%"},14,10,4,{"v":0.162991,"d":"0.163"},{"v":0.00127612,"d":"0.0013"},"gi|225445234|ref|XP_002280953.1|","PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic [Vitis vinifera] >gi|297738824|emb|CBI28069.3| unnamed protein product [Vitis vinifera]","gi|225445233|ref|XM_002280917.1|","PREDICTED: Vitis vinifera probable chlorophyll(ide) b reductase NYC1, chloroplastic-like (LOC100259397), mRNA","sp|Q5N800|NYC1_ORYSJ","Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1","COG1028","Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)","K13606","vvi:100259397","chlorophyll(ide) b reductase [EC:1.1.1.294]","GO:0055114//oxidation-reduction process;GO:0010304//PSII associated light-harvesting complex II catabolic process;GO:0015996//chlorophyll catabolic process","GO:0034256//chlorophyll(ide) b reductase activity;GO:0000166//nucleotide binding;GO:0047936//glucose 1-dehydrogenase [NAD(P)] activity","GO:0016021//integral to membrane;GO:0009535//chloroplast thylakoid membrane;GO:0042170//plastid membrane"]
[533,"CSE_CL479_Contig2","SW_Unigene6177","-","-","+(Mostly)",873,{"v":0.967,"d":"96.70%"},11,6,5,{"v":0.257259,"d":"0.257"},{"v":0.0268016,"d":"0.0268"},"gi|225445248|ref|XP_002281028.1|","PREDICTED: heat stress transcription factor C-1 [Vitis vinifera] >gi|147779536|emb|CAN72162.1| hypothetical protein VITISV_009631 [Vitis vinifera] >gi|297738829|emb|CBI28074.3| unnamed protein product [Vitis vinifera]","gi|225445247|ref|XM_002280992.1|","PREDICTED: Vitis vinifera heat stress transcription factor C-1-like (LOC100250904), mRNA","sp|Q9LV52|HSFC1_ARATH","Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1","COG5169","Heat shock transcription factor","-","-","-","GO:0006355//regulation of transcription, DNA-dependent;GO:0009407//toxin catabolic process","GO:0043565//sequence-specific DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0005634//nucleus"]
[534,"CSE_Unigene15280","SW_Unigene22636","-","-","+(Mostly)",1572,{"v":0.993,"d":"99.30%"},11,7,4,{"v":0.209268,"d":"0.209"},{"v":0.0116122,"d":"0.0116"},"gi|297738859|emb|CBI28104.3|","unnamed protein product [Vitis vinifera]","gi|359484609|ref|XM_002281317.2|","PREDICTED: Vitis vinifera protein mrp homolog (LOC100250898), mRNA","sp|Q20EV4|MIND_OLTVI","Putative septum site-determining protein MinD OS=Oltmannsiellopsis viridis GN=minD PE=3 SV=1","COG0489","ATPases involved in chromosome partitioning","K03593","vvi:100242483","ATP-binding protein involved in chromosome partitioning","GO:0006098//pentose-phosphate shunt;GO:0016117//carotenoid biosynthetic process;GO:0043085//positive regulation of catalytic activity;GO:0019252//starch biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009902//chloroplast relocation;GO:0015979//photosynthesis;GO:0000023//maltose metabolic process;GO:0015995//chlorophyll biosynthetic process;GO:0016226//iron-sulfur cluster assembly;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0005524//ATP binding","GO:0009570//chloroplast stroma"]
[535,"CSE_Unigene16183","SW_Unigene21686","-","-","+(Mostly)",1272,{"v":0.996,"d":"99.60%"},5,1,4,{"v":1.30287,"d":"1.303"},{"v":0.755333,"d":"0.7553"},"gi|359484612|ref|XP_003633131.1|","PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 2 [Vitis vinifera]","gi|359484611|ref|XM_003633083.1|","PREDICTED: Vitis vinifera 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like, transcript variant 2 (LOC100261210), mRNA","sp|Q9T0K7|HIBC6_ARATH","3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2","COG1024","Enoyl-CoA hydratase/carnithine racemase","K05605","aly:ARALYDRAFT_668778","3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]","GO:0008152//metabolic process","GO:0004300//enoyl-CoA hydratase activity;GO:0016787//hydrolase activity;GO:0016853//isomerase activity","GO:0016020//membrane;GO:0005829//cytosol;GO:0005739//mitochondrion"]
[536,"CSE_CL2911_Contig4","SW_CL3539_Contig4","-","-","+(Mostly)",1251,{"v":0.995,"d":"99.50%"},6,3,3,{"v":0.372599,"d":"0.373"},{"v":0.205196,"d":"0.2052"},"gi|297738888|emb|CBI28133.3|","unnamed protein product [Vitis vinifera]","gi|359484380|ref|XM_002284884.2|","PREDICTED: Vitis vinifera uncharacterized LOC100254194 (LOC100254194), mRNA","sp|Q1EBV7|BASS2_ARATH","Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana GN=BASS2 PE=2 SV=1","COG0385","Predicted Na+-dependent transporter","K03453","vvi:100254194","bile acid:Na+ symporter, BASS family","GO:0006849//plasma membrane pyruvate transport;GO:0035725//sodium ion transmembrane transport;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0019761//glucosinolate biosynthetic process;GO:0043085//positive regulation of catalytic activity","GO:0050833//pyruvate transmembrane transporter activity;GO:0008508//bile acid:sodium symporter activity","GO:0016021//integral to membrane;GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid"]
[537,"CSE_Unigene16387","SW_Unigene22218","-","-","+(Mostly)",1143,{"v":0.994,"d":"99.40%"},7,5,2,{"v":0.118334,"d":"0.118"},{"v":0.00866271,"d":"0.0087"},"gi|225445416|ref|XP_002285026.1|","PREDICTED: probable protein arginine N-methyltransferase 4.2 [Vitis vinifera]","gi|225445415|ref|XM_002284990.1|","PREDICTED: Vitis vinifera probable protein arginine N-methyltransferase 4.2-like (LOC100262845), mRNA","sp|Q9MAT5|ANM10_ARATH","Protein arginine N-methyltransferase PRMT10 OS=Arabidopsis thaliana GN=PRMT10 PE=1 SV=1","COG0500","SAM-dependent methyltransferases","K11434","vvi:100262845","protein arginine N-methyltransferase 1 [EC:2.1.1.-]","GO:0034968//histone lysine methylation;GO:0009909//regulation of flower development;GO:0019919//peptidyl-arginine methylation, to asymmetrical-dimethyl arginine;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0034969//histone arginine methylation","GO:0035241//protein-arginine omega-N monomethyltransferase activity;GO:0008469//histone-arginine N-methyltransferase activity;GO:0016277//[myelin basic protein]-arginine N-methyltransferase activity;GO:0035242//protein-arginine omega-N asymmetric methyltransferase activity","GO:0005829//cytosol;GO:0005634//nucleus"]
[538,"CSE_Unigene20041","SW_Unigene13882","-","-","+(Mostly)",1413,{"v":0.994,"d":"99.40%"},9,4,5,{"v":0.386165,"d":"0.386"},{"v":0.141206,"d":"0.1412"},"gi|225445567|ref|XP_002285333.1|","PREDICTED: BRCA1-associated protein [Vitis vinifera] >gi|297738981|emb|CBI28226.3| unnamed protein product [Vitis vinifera]","gi|359484205|ref|XM_002285297.2|","PREDICTED: Vitis vinifera BRCA1-associated protein-like (LOC100249232), mRNA","-","-","COG5207","Isopeptidase T","K10632","vvi:100249232","BRCA1-associated protein [EC:6.3.2.19]","GO:0010029//regulation of seed germination","GO:0004842//ubiquitin-protein ligase activity;GO:0008270//zinc ion binding;GO:0046982//protein heterodimerization activity","GO:0005737//cytoplasm;GO:0000151//ubiquitin ligase complex"]
[539,"CSE_Unigene12759","SW_Unigene10354","-","-","+(Mostly)",1437,{"v":0.987,"d":"98.70%"},18,7,11,{"v":0.687453,"d":"0.687"},{"v":0.444632,"d":"0.4446"},"gi|359484849|ref|XP_002275774.2|","PREDICTED: APO protein 2, chloroplastic-like [Vitis vinifera]","gi|359484848|ref|XM_002275738.2|","PREDICTED: Vitis vinifera APO protein 2, chloroplastic-like (LOC100244952), mRNA","sp|Q8W4A5|APO2_ARATH","APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1","-","-","-","-","-","GO:0010155//regulation of proton transport;GO:0009793//embryo development ending in seed dormancy;GO:0019252//starch biosynthetic process;GO:0000023//maltose metabolic process;GO:0016556//mRNA modification;GO:0016226//iron-sulfur cluster assembly;GO:0046777//protein autophosphorylation;GO:0009637//response to blue light;GO:0019761//glucosinolate biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process","GO:0009055//electron carrier activity;GO:0003723//RNA binding;GO:0005507//copper ion binding","GO:0009507//chloroplast"]
[540,"CSE_Unigene14406","SW_Unigene14254","-","-","+(Mostly)",816,{"v":0.987,"d":"98.70%"},11,2,9,{"v":1.38087,"d":"1.381"},{"v":0.948082,"d":"0.9481"},"gi|225445818|ref|XP_002276984.1|","PREDICTED: translation initiation factor IF-3 [Vitis vinifera] >gi|297743667|emb|CBI36550.3| unnamed protein product [Vitis vinifera]","gi|225445817|ref|XM_002276948.1|","PREDICTED: Vitis vinifera translation initiation factor IF-3-like (LOC100243384), mRNA","sp|Q85G77|IF3C_CYAME","Translation initiation factor IF-3, chloroplastic OS=Cyanidioschyzon merolae GN=infC PE=3 SV=1","COG0290","Translation initiation factor 3 (IF-3)","K02520","vvi:100243384","translation initiation factor IF-3","GO:0006413//translational initiation;GO:0045036//protein targeting to chloroplast;GO:0009793//embryo development ending in seed dormancy;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016226//iron-sulfur cluster assembly;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0009073//aromatic amino acid family biosynthetic process","GO:0003743//translation initiation factor activity","GO:0009507//chloroplast;GO:0005618//cell wall"]
[541,"CSE_CL6287_Contig1","SW_CL1419_Contig4","-","-","+(Mostly)",1104,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.343637,"d":"0.344"},{"v":0.267972,"d":"0.2680"},"gi|359484818|ref|XP_003633169.1|","PREDICTED: autophagy-related protein 18-like [Vitis vinifera]","gi|359484817|ref|XM_003633121.1|","PREDICTED: Vitis vinifera autophagy-related protein 18-like (LOC100854449), mRNA","-","-","-","-","-","-","-","GO:0000045//autophagic vacuole assembly","GO:0080025//phosphatidylinositol-3,5-bisphosphate binding;GO:0032266//phosphatidylinositol-3-phosphate binding","GO:0000421//autophagic vacuole membrane;GO:0034045//pre-autophagosomal structure membrane;GO:0005829//cytosol"]
[542,"CSE_Unigene18071","SW_Unigene12967","-","-","+(Mostly)",1377,{"v":0.993,"d":"99.30%"},10,5,5,{"v":0.364689,"d":"0.365"},{"v":0.101216,"d":"0.1012"},"gi|229609829|gb|ACQ83530.1|","CBL-interacting protein kinase 14 [Vitis vinifera]","gi|359485044|ref|XM_002277369.2|","PREDICTED: Vitis vinifera CBL-interacting protein kinase 14 (CIPK14), mRNA","sp|Q94CG0|CIPKL_ARATH","CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K00924","osa:4342410","[EC:2.7.1.-]","GO:0006468//protein phosphorylation;GO:0097305//response to alcohol;GO:0009725//response to hormone stimulus;GO:0009628//response to abiotic stimulus;GO:0031667//response to nutrient levels;GO:0006813//potassium ion transport;GO:0007165//signal transduction;GO:0006950//response to stress","GO:0005524//ATP binding;GO:0004683//calmodulin-dependent protein kinase activity","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[543,"CSE_CL1886_Contig6","SW_Unigene9818","-","-","+(Mostly)",927,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.0985712,"d":"0.099"},{"v":0.0370708,"d":"0.0371"},"gi|225446046|ref|XP_002270836.1|","PREDICTED: uncharacterized protein LOC100263238 [Vitis vinifera]","gi|225446045|ref|XM_002270800.1|","PREDICTED: Vitis vinifera uncharacterized LOC100263238 (LOC100263238), mRNA","-","-","COG1196","Chromosome segregation ATPases","K06085","ppp:PHYPADRAFT_186245","synovial sarcoma, X breakpoint 2 interacting protein","GO:0046686//response to cadmium ion","-","GO:0005634//nucleus"]
[544,"CSE_Unigene19704","SW_Unigene11683","-","-","+(Mostly)",1170,{"v":0.991,"d":"99.10%"},5,4,1,{"v":0.0797138,"d":"0.080"},{"v":0.013117,"d":"0.0131"},"gi|225446028|ref|XP_002269944.1|","PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Vitis vinifera] >gi|297735406|emb|CBI17846.3| unnamed protein product [Vitis vinifera]","gi|225446027|ref|XM_002269908.1|","PREDICTED: Vitis vinifera probable receptor-like serine/threonine-protein kinase At5g57670 (LOC100266827), mRNA","sp|Q5XF57|Y5576_ARATH","Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana GN=At5g57670 PE=2 SV=1","COG0515","Serine/threonine protein kinase","K04733","smo:SELMODRAFT_33807","interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]","GO:0006468//protein phosphorylation","GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity","GO:0005634//nucleus"]
[545,"CSE_Unigene11874","SW_CL5995_Contig1","-","-","+(Mostly)",1602,{"v":0.989,"d":"98.90%"},15,11,4,{"v":0.147494,"d":"0.147"},{"v":0.000488301,"d":"0.0005"},"gi|359484929|ref|XP_002262945.2|","PREDICTED: preprotein translocase subunit secY, chloroplastic-like [Vitis vinifera]","gi|359484928|ref|XM_002262909.2|","PREDICTED: Vitis vinifera preprotein translocase subunit secY, chloroplastic-like (LOC100248517), mRNA","sp|Q38885|SCY1_ARATH","Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis thaliana GN=SCY1 PE=1 SV=2","COG0201","Preprotein translocase subunit SecY","K10956","aly:ARALYDRAFT_480774","protein transport protein SEC61 subunit alpha","GO:0009306//protein secretion;GO:0006354//DNA-dependent transcription, elongation;GO:0010027//thylakoid membrane organization","GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005515//protein binding","GO:0016021//integral to membrane;GO:0009535//chloroplast thylakoid membrane"]
[546,"CSE_Unigene18817","SW_Unigene16364","-","-","+(Mostly)",1308,{"v":0.989,"d":"98.90%"},14,9,5,{"v":0.193327,"d":"0.193"},{"v":0.00286265,"d":"0.0029"},"gi|225462522|ref|XP_002264528.1|","PREDICTED: galacturonokinase [Vitis vinifera] >gi|296090474|emb|CBI40670.3| unnamed protein product [Vitis vinifera]","gi|225462521|ref|XM_002264492.1|","PREDICTED: Vitis vinifera galacturonokinase-like (LOC100261773), mRNA","sp|Q8VYG2|GALAK_ARATH","Galacturonokinase OS=Arabidopsis thaliana GN=GALAK PE=1 SV=1","COG0153","Galactokinase","K00849","vvi:100261773","galactokinase [EC:2.7.1.6]","GO:0046835//carbohydrate phosphorylation;GO:0046396//D-galacturonate metabolic process;GO:0006012//galactose metabolic process","GO:0005524//ATP binding;GO:0004335//galactokinase activity;GO:0047912//galacturonokinase activity","GO:0005829//cytosol"]
[547,"CSE_Unigene18573","SW_Unigene10509","-","-","+(Mostly)",333,{"v":0.997,"d":"99.70%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225446891|ref|XP_002284045.1|","PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] >gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]","gi|359485155|ref|XM_002284009.2|","PREDICTED: Vitis vinifera endoplasmic reticulum-Golgi intermediate compartment protein 3-like (LOC100260862), mRNA","sp|Q9LJU2|PDI53_ARATH","Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3 PE=2 SV=1","-","-","-","-","-","-","-","GO:0005783//endoplasmic reticulum"]
[548,"CSE_Unigene12573","SW_CL4464_Contig2","-","-","+(Mostly)",1272,{"v":0.99,"d":"99.00%"},10,7,3,{"v":0.165406,"d":"0.165"},{"v":0.00695228,"d":"0.0070"},"gi|462396428|gb|EMJ02227.1|","hypothetical protein PRUPE_ppa005657mg [Prunus persica]","gi|359485748|ref|XM_002264383.2|","PREDICTED: Vitis vinifera protein trpH-like (LOC100245053), mRNA","-","-","COG0613","Predicted metal-dependent phosphoesterases (PHP family)","K07053","vvi:100245053",null,"GO:0006260//DNA replication","GO:0003887//DNA-directed DNA polymerase activity;GO:0003677//DNA binding","GO:0005737//cytoplasm"]
[549,"CSE_Unigene14547","SW_CL6373_Contig2","-","-","+(Mostly)",2028,{"v":0.994,"d":"99.40%"},13,7,6,{"v":0.36291,"d":"0.363"},{"v":0.0605778,"d":"0.0606"},"gi|225446513|ref|XP_002278771.1|","PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis vinifera] >gi|302143376|emb|CBI21937.3| unnamed protein product [Vitis vinifera]","gi|225446512|ref|XM_002278735.1|","PREDICTED: Vitis vinifera GTP-binding protein TypA/BipA homolog-like, transcript variant 1 (LOC100247278), mRNA","sp|B9GHA6|GUFP_POPTR","Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=1","COG1217","Predicted membrane GTPase involved in stress response","K06207","vvi:100247278","GTP-binding protein","GO:0006184//GTP catabolic process;GO:0006626//protein targeting to mitochondrion","GO:0003746//translation elongation factor activity;GO:0005525//GTP binding;GO:0003924//GTPase activity","GO:0009507//chloroplast;GO:0005886//plasma membrane;GO:0005739//mitochondrion"]
[550,"CSE_Unigene16108","SW_Unigene2002","-","-","+(Mostly)",1062,{"v":0.993,"d":"99.30%"},7,2,5,{"v":0.861494,"d":"0.861"},{"v":0.875075,"d":"0.8751"},"gi|225446553|ref|XP_002279537.1|","PREDICTED: uncharacterized protein HI_0077-like [Vitis vinifera]","gi|359485274|ref|XM_002279501.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265975 (LOC100265975), mRNA","-","-","COG2833","Uncharacterized protein conserved in bacteria","-","-","-","GO:0055114//oxidation-reduction process","GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[551,"CSE_Unigene16696","SW_Unigene10656","-","-","+(Mostly)",876,{"v":0.989,"d":"98.90%"},10,7,3,{"v":0.14973,"d":"0.150"},{"v":0.00461729,"d":"0.0046"},"gi|359485436|ref|XP_002280009.2|","PREDICTED: uncharacterized protein LOC100245387 [Vitis vinifera]","gi|359485435|ref|XM_002279973.2|","PREDICTED: Vitis vinifera uncharacterized LOC100245387 (LOC100245387), mRNA","sp|Q681Q7|Y1390_ARATH","Uncharacterized protein At1g03900 OS=Arabidopsis thaliana GN=At1g03900 PE=2 SV=1","-","-","-","-","-","GO:0006897//endocytosis;GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0016020//membrane;GO:0005737//cytoplasm;GO:0005634//nucleus"]
[552,"CSE_Unigene18305","SW_Unigene16336","-","-","+(Mostly)",1899,{"v":0.987,"d":"98.70%"},18,10,8,{"v":0.291807,"d":"0.292"},{"v":0.00923073,"d":"0.0092"},"gi|225446625|ref|XP_002276769.1|","PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera]","gi|359485289|ref|XM_002276733.2|","PREDICTED: Vitis vinifera uncharacterized LOC100267778 (LOC100267778), mRNA","sp|P93014|RR5_ARATH","30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana GN=rps5 PE=1 SV=1","COG0098","Ribosomal protein S5","K02988","osa:4327989","small subunit ribosomal protein S5","GO:0006412//translation;GO:0009220//pyrimidine ribonucleotide biosynthetic process","GO:0003723//RNA binding;GO:0003735//structural constituent of ribosome","GO:0005840//ribosome;GO:0005739//mitochondrion;GO:0009536//plastid;GO:0005768//endosome;GO:0005802//trans-Golgi network;GO:0005794//Golgi apparatus"]
[553,"CSE_Unigene19055","SW_Unigene12519","-","-","+(Mostly)",1638,{"v":0.995,"d":"99.50%"},8,6,2,{"v":0.0915493,"d":"0.092"},{"v":0.00189251,"d":"0.0019"},"gi|225446761|ref|XP_002278350.1|","PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Vitis vinifera] >gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]","gi|359485480|ref|XM_002278314.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At3g59040-like (LOC100250692), mRNA","sp|Q9LYT2|PP287_ARATH","Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006098//pentose-phosphate shunt;GO:0006364//rRNA processing;GO:0009658//chloroplast organization;GO:0006399//tRNA metabolic process","-","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[554,"CSE_Unigene15948","SW_Unigene17111","-","-","+(Mostly)",1050,{"v":0.99,"d":"99.00%"},10,6,4,{"v":0.22181,"d":"0.222"},{"v":0.019944,"d":"0.0199"},"gi|359484336|ref|XP_002283629.2|","PREDICTED: uncharacterized oxidoreductase ykwC-like [Vitis vinifera]","gi|359484335|ref|XM_002283593.2|","PREDICTED: Vitis vinifera uncharacterized LOC100264642 (LOC100264642), mRNA","sp|Q9SZE1|3HID1_ARATH","Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1","COG2084","3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases","K00020","olu:OSTLU_45774","3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]","GO:0006098//pentose-phosphate shunt","GO:0004616//phosphogluconate dehydrogenase (decarboxylating) activity;GO:0050662//coenzyme binding;GO:0000166//nucleotide binding","GO:0005829//cytosol;GO:0005739//mitochondrion"]
[555,"CSE_Unigene11954","SW_Unigene8812","-","-","+(Mostly)",1104,{"v":0.992,"d":"99.20%"},9,6,3,{"v":0.176661,"d":"0.177"},{"v":0.0127474,"d":"0.0127"},"gi|359486005|ref|XP_002273436.2|","PREDICTED: patatin-like phospholipase domain-containing protein 4-like [Vitis vinifera] >gi|298204588|emb|CBI23863.3| unnamed protein product [Vitis vinifera]","gi|359486004|ref|XM_002273400.2|","PREDICTED: Vitis vinifera patatin-like phospholipase domain-containing protein 4-like (LOC100249796), mRNA","sp|O65530|PEK14_ARATH","Proline-rich receptor-like protein kinase PERK14 OS=Arabidopsis thaliana GN=PERK14 PE=2 SV=1","-","-","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0006629//lipid metabolic process","GO:0016787//hydrolase activity","GO:0005886//plasma membrane"]
[556,"CSE_Unigene11505","SW_Unigene2004","-","-","+(Mostly)",1269,{"v":0.991,"d":"99.10%"},11,7,4,{"v":0.142527,"d":"0.143"},{"v":0.00200503,"d":"0.0020"},"gi|225448146|ref|XP_002263852.1|","PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like [Vitis vinifera]","gi|225448145|ref|XM_002263816.1|","PREDICTED: Vitis vinifera uncharacterized LOC100252435 (LOC100252435), mRNA","sp|Q67XL4|Y3544_ARATH","Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1","-","-","-","-","-","GO:0042761//very long-chain fatty acid biosynthetic process","GO:0003676//nucleic acid binding;GO:0050291//sphingosine N-acyltransferase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[557,"CSE_Unigene14031","SW_Unigene10920","-","-","+(Mostly)",489,{"v":0.986,"d":"98.60%"},7,3,4,{"v":0.558509,"d":"0.559"},{"v":0.344325,"d":"0.3443"},"gi|225448148|ref|XP_002263968.1|","PREDICTED: transmembrane protein 18 [Vitis vinifera] >gi|297739539|emb|CBI29721.3| unnamed protein product [Vitis vinifera]","gi|359486164|ref|XM_002263932.2|","PREDICTED: Vitis vinifera transmembrane protein 18-like (LOC100261201), mRNA","-","-","-","-","K07243","olu:OSTLU_8406","high-affinity iron transporter","-","-","GO:0005634//nucleus;GO:0005783//endoplasmic reticulum"]
[558,"CSE_Unigene13050","SW_Unigene504","-","-","+(Mostly)",990,{"v":0.994,"d":"99.40%"},6,3,3,{"v":0.362213,"d":"0.362"},{"v":0.195996,"d":"0.1960"},"gi|225448160|ref|XP_002264958.1|","PREDICTED: protein EI24 homolog [Vitis vinifera] >gi|297739548|emb|CBI29730.3| unnamed protein product [Vitis vinifera]","gi|225448159|ref|XM_002264922.1|","PREDICTED: Vitis vinifera protein EI24 homolog-like (LOC100245823), mRNA","-","-","-","-","K10134","vvi:100245823","etoposide-induced 2.4 mRNA","-","-","GO:0005739//mitochondrion"]
[559,"CSE_Unigene18939","SW_Unigene7554","-","-","+(Mostly)",2319,{"v":0.994,"d":"99.40%"},14,10,4,{"v":0.133923,"d":"0.134"},{"v":0.000360871,"d":"0.0004"},"gi|225447799|ref|XP_002266729.1|","PREDICTED: dynamin-like protein ARC5 [Vitis vinifera]","gi|359485991|ref|XM_002266693.2|","PREDICTED: Vitis vinifera dynamin-like protein ARC5 (LOC100253726), mRNA","sp|Q84N64|ARC5_ARATH","Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 PE=1 SV=2","COG0699","Predicted GTPases (dynamin-related)","K01528","osa:4327743","dynamin GTPase [EC:3.6.5.5]","GO:0016559//peroxisome fission;GO:0007623//circadian rhythm;GO:0006184//GTP catabolic process;GO:0010020//chloroplast fission","GO:0042802//identical protein binding;GO:0003924//GTPase activity;GO:0005525//GTP binding","GO:0005777//peroxisome;GO:0005739//mitochondrion;GO:0009707//chloroplast outer membrane"]
[560,"CSE_CL4680_Contig2","SW_Unigene15195","-","-","+(Mostly)",1194,{"v":0.994,"d":"99.40%"},7,6,1,{"v":0.0666804,"d":"0.067"},{"v":0.00280858,"d":"0.0028"},"gi|225446987|ref|XP_002266264.1|","PREDICTED: TBC1 domain family member 2A [Vitis vinifera] >gi|297739137|emb|CBI28788.3| unnamed protein product [Vitis vinifera]","gi|359485656|ref|XM_002266228.2|","PREDICTED: Vitis vinifera TBC1 domain family member 2A-like (LOC100261881), mRNA","-","-","COG5210","GTPase-activating protein","-","-","-","GO:0060151//peroxisome localization;GO:0051646//mitochondrion localization;GO:0051645//Golgi localization;GO:0030048//actin filament-based movement;GO:0032851//positive regulation of Rab GTPase activity","GO:0005097//Rab GTPase activator activity","GO:0005737//cytoplasm"]
[561,"CSE_Unigene19268","SW_Unigene12512","-","-","+(Mostly)",1458,{"v":0.992,"d":"99.20%"},12,3,9,{"v":0.656235,"d":"0.656"},{"v":0.369726,"d":"0.3697"},"gi|297739186|emb|CBI28837.3|","unnamed protein product [Vitis vinifera]","gi|268636279|gb|FJ861082.1|","Vitis vinifera cultivar Sauvignon Blanc fatty acid hydroperoxide lyase (HPLA) mRNA, complete cds","sp|P48417|CP74_LINUS","Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1","COG2124","Cytochrome P450","K10528","vvi:100251750","hydroperoxide lyase [EC:4.1.2.-]","GO:0009611//response to wounding;GO:0055114//oxidation-reduction process","GO:0009055//electron carrier activity;GO:0004497//monooxygenase activity;GO:0005506//iron ion binding;GO:0020037//heme binding;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016829//lyase activity","GO:0009941//chloroplast envelope"]
[562,"CSE_Unigene10745","SW_Unigene23257","-","-","+(Mostly)",981,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.111212,"d":"0.111"},{"v":0.0473582,"d":"0.0474"},"gi|359485666|ref|XP_002273999.2|","PREDICTED: APO protein 4, mitochondrial-like [Vitis vinifera]","gi|359485665|ref|XM_002273963.2|","PREDICTED: Vitis vinifera APO protein 4, mitochondrial-like (LOC100263618), mRNA","sp|Q9LSZ0|APO4_ARATH","APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2","-","-","-","-","-","-","GO:0003723//RNA binding","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[563,"CSE_Unigene19827","SW_CL5851_Contig1","-","-","+(Mostly)",1569,{"v":0.994,"d":"99.40%"},9,2,7,{"v":1.09813,"d":"1.098"},{"v":0.914814,"d":"0.9148"},"gi|225449963|ref|XP_002271167.1|","PREDICTED: uncharacterized protein LOC100265442 [Vitis vinifera] >gi|296085106|emb|CBI28601.3| unnamed protein product [Vitis vinifera]","gi|359487234|ref|XM_002271131.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265442 (LOC100265442), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","K13535","cre:CHLREDRAFT_121979","cardiolipin-specific phospholipase [EC:3.1.1.-]","GO:0015996//chlorophyll catabolic process","GO:0005515//protein binding;GO:0080124//pheophytinase activity","GO:0009507//chloroplast"]
[564,"CSE_Unigene14454","SW_Unigene22622","-","-","+(Mostly)",852,{"v":0.992,"d":"99.20%"},4,3,1,{"v":0.119524,"d":"0.120"},{"v":0.0547344,"d":"0.0547"},"gi|225448948|ref|XP_002268646.1|","PREDICTED: 50S ribosomal protein L15 [Vitis vinifera] >gi|296085970|emb|CBI31411.3| unnamed protein product [Vitis vinifera]","gi|359486848|ref|XM_002268610.2|","PREDICTED: Vitis vinifera 50S ribosomal protein L15-like (LOC100251266), mRNA","sp|P25873|RK15_ARATH","50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2","COG0200","Ribosomal protein L15","K02876","aly:ARALYDRAFT_484358","large subunit ribosomal protein L15","GO:0006412//translation;GO:0006354//DNA-dependent transcription, elongation;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0042254//ribosome biogenesis","GO:0003735//structural constituent of ribosome","GO:0005739//mitochondrion;GO:0015934//large ribosomal subunit"]
[565,"CSE_Unigene14480","SW_Unigene15453","-","-","+(Mostly)",1077,{"v":0.991,"d":"99.10%"},10,8,2,{"v":0.104701,"d":"0.105"},{"v":0.00149079,"d":"0.0015"},"gi|225448962|ref|XP_002269306.1|","PREDICTED: uncharacterized protein LOC100258145 [Vitis vinifera] >gi|296085977|emb|CBI31418.3| unnamed protein product [Vitis vinifera]","gi|123719656|emb|AM452045.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X089529.29, clone ENTAV 115","-","-","-","-","-","-","-","-","-","-"]
[566,"CSE_Unigene13706","SW_Unigene16656","-","-","+(Mostly)",963,{"v":0.994,"d":"99.40%"},6,2,4,{"v":0.536058,"d":"0.536"},{"v":0.373795,"d":"0.3738"},"gi|225449050|ref|XP_002274358.1|","PREDICTED: mRNA decapping complex subunit 2 [Vitis vinifera] >gi|296086018|emb|CBI31459.3| unnamed protein product [Vitis vinifera]","gi|359486669|ref|XM_002274322.2|","PREDICTED: Vitis vinifera mRNA decapping complex subunit 2-like (LOC100249543), mRNA","sp|Q8GW31|DCP2_ARATH","mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1","COG0494","NTP pyrophosphohydrolases including oxidative damage repair enzymes","K12613","vvi:100249543","mRNA-decapping enzyme subunit 2 [EC:3.-.-.-]","GO:0006635//fatty acid beta-oxidation;GO:0016558//protein import into peroxisome matrix;GO:0031087//deadenylation-independent decapping of nuclear-transcribed mRNA;GO:0016441//posttranscriptional gene silencing;GO:0010072//primary shoot apical meristem specification","GO:0050072//m7G(5')pppN diphosphatase activity;GO:0030145//manganese ion binding;GO:0000287//magnesium ion binding;GO:0042803//protein homodimerization activity;GO:0003729//mRNA binding","GO:0000932//cytoplasmic mRNA processing body;GO:0005634//nucleus"]
[567,"CSE_Unigene14876","SW_Unigene22762","-","-","+(Mostly)",2079,{"v":0.995,"d":"99.50%"},10,6,4,{"v":0.190531,"d":"0.191"},{"v":0.0110727,"d":"0.0111"},"gi|225449124|ref|XP_002274888.1|","PREDICTED: nucleolar complex protein 2 homolog [Vitis vinifera]","gi|225449123|ref|XM_002274852.1|","PREDICTED: Vitis vinifera nucleolar complex protein 2 homolog (LOC100247856), mRNA","sp|Q9ZPV5|NOC2L_ARATH","Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana GN=At2g18220 PE=2 SV=2","COG5604","Uncharacterized conserved protein","K14833","osa:4351580","nucleolar complex protein 2","GO:0001510//RNA methylation;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0010582//floral meristem determinacy;GO:0010228//vegetative to reproductive phase transition of meristem","GO:0000166//nucleotide binding","GO:0048188//Set1C/COMPASS complex;GO:0005834//heterotrimeric G-protein complex"]
[568,"CSE_CL1169_Contig2","SW_Unigene16998","-","-","+(Mostly)",1197,{"v":0.991,"d":"99.10%"},11,3,8,{"v":0.793568,"d":"0.794"},{"v":0.666036,"d":"0.6660"},"gi|225449184|ref|XP_002278923.1|","PREDICTED: uncharacterized protein LOC100240981 [Vitis vinifera] >gi|296086083|emb|CBI31524.3| unnamed protein product [Vitis vinifera]","gi|225449183|ref|XM_002278887.1|","PREDICTED: Vitis vinifera uncharacterized LOC100240981 (LOC100240981), mRNA","-","-","COG1723","Uncharacterized conserved protein","-","-","-","-","-","GO:0005739//mitochondrion"]
[569,"CSE_Unigene14178","SW_Unigene15117","-","-","+(Mostly)",1008,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.11585,"d":"0.116"},{"v":0.0514403,"d":"0.0514"},"gi|296086092|emb|CBI31533.3|","unnamed protein product [Vitis vinifera]","gi|359486714|ref|XM_002279452.2|","PREDICTED: Vitis vinifera mitochondrial substrate carrier family protein Q-like (LOC100261501), mRNA","sp|O04200|PXN_ARATH","Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1","-","-","K13354","vvi:100261501","solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17","GO:0006635//fatty acid beta-oxidation;GO:0043132//NAD transport;GO:0044375//regulation of peroxisome size","-","GO:0005743//mitochondrial inner membrane;GO:0016021//integral to membrane;GO:0005778//peroxisomal membrane;GO:0005774//vacuolar membrane;GO:0005886//plasma membrane"]
[570,"CSE_Unigene9011","SW_Unigene13908","-","-","+(Mostly)",837,{"v":0.998,"d":"99.80%"},2,"NA",2,"NA","NA","gi|225449311|ref|XP_002277052.1|","PREDICTED: uncharacterized protein C22orf13 homolog [Vitis vinifera] >gi|296086142|emb|CBI31583.3| unnamed protein product [Vitis vinifera]","gi|359486746|ref|XM_002277016.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263230 (LOC100263230), mRNA","-","-","-","-","-","-","-","GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016117//carotenoid biosynthetic process;GO:0010027//thylakoid membrane organization;GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0010020//chloroplast fission","GO:0005488//binding","GO:0009941//chloroplast envelope;GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[571,"CSE_Unigene18118","SW_Unigene15185","-","-","+(Mostly)",807,{"v":0.991,"d":"99.10%"},7,4,3,{"v":0.232707,"d":"0.233"},{"v":0.0598866,"d":"0.0599"},"gi|296086170|emb|CBI31611.3|","unnamed protein product [Vitis vinifera]","gi|359486762|ref|XM_002282307.2|","PREDICTED: Vitis vinifera protein YIPF1 homolog-like (LOC100249608), mRNA","-","-","-","-","-","-","-","-","-","GO:0016020//membrane"]
[572,"CSE_CL3401_Contig1","SW_CL4969_Contig2","-","-","+(Mostly)",1449,{"v":0.994,"d":"99.40%"},9,4,5,{"v":0.394279,"d":"0.394"},{"v":0.147884,"d":"0.1479"},"gi|359486610|ref|XP_002277771.2|","PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera] >gi|296086183|emb|CBI31624.3| unnamed protein product [Vitis vinifera]","gi|359486609|ref|XM_002277735.2|","PREDICTED: Vitis vinifera poly(A) RNA polymerase GLD2-like (LOC100247843), mRNA","-","-","COG5260","DNA polymerase sigma","K14079","mtr:MTR_005s0002","poly(A) RNA polymerase GLD2 [EC:2.7.7.19]","GO:0071076//RNA 3' uridylation","GO:0016779//nucleotidyltransferase activity","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[573,"CSE_Unigene11807","SW_Unigene877","-","-","+(Mostly)",825,{"v":0.995,"d":"99.50%"},4,3,1,{"v":0.110088,"d":"0.110"},{"v":0.0464819,"d":"0.0465"},"gi|359486786|ref|XP_002283148.2|","PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera] >gi|296086209|emb|CBI31650.3| unnamed protein product [Vitis vinifera]","gi|359486785|ref|XM_002283112.2|","PREDICTED: Vitis vinifera E3 ubiquitin-protein ligase SDIR1-like (LOC100246103), mRNA","sp|Q9M2S6|SDIR1_ARATH","E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1","-","-","K11982","zma:100383341","E3 ubiquitin-protein ligase RNF115/126 [EC:6.3.2.19]","GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0009414//response to water deprivation;GO:0009651//response to salt stress;GO:0009086//methionine biosynthetic process;GO:0006511//ubiquitin-dependent protein catabolic process;GO:0016567//protein ubiquitination;GO:0006301//postreplication repair;GO:0009789//positive regulation of abscisic acid mediated signaling pathway","GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein ligase activity","GO:0005634//nucleus"]
[574,"CSE_Unigene1399","SW_Unigene6634","-","-","+(Mostly)",294,{"v":0.986,"d":"98.60%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225449493|ref|XP_002278609.1|","PREDICTED: geranylgeranyl transferase type-1 subunit beta [Vitis vinifera] >gi|296086228|emb|CBI31669.3| unnamed protein product [Vitis vinifera]","gi|225449492|ref|XM_002278573.1|","PREDICTED: Vitis vinifera geranylgeranyl transferase type-1 subunit beta-like (LOC100241042), mRNA","sp|Q38920|FNTB_ARATH","Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana GN=FTB PE=1 SV=3","COG5029","Prenyltransferase, beta subunit","K11713","vvi:100241042","geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59]","GO:0009788//negative regulation of abscisic acid mediated signaling pathway;GO:0009414//response to water deprivation;GO:0009733//response to auxin stimulus;GO:0018344//protein geranylgeranylation","GO:0004662//CAAX-protein geranylgeranyltransferase activity;GO:0004663//Rab geranylgeranyltransferase activity;GO:0046982//protein heterodimerization activity","GO:0005953//CAAX-protein geranylgeranyltransferase complex;GO:0005634//nucleus"]
[575,"CSE_Unigene19760","SW_Unigene17053","-","-","+(Mostly)",1215,{"v":0.984,"d":"98.40%"},11,6,5,{"v":0.325834,"d":"0.326"},{"v":0.0600217,"d":"0.0600"},"gi|225449545|ref|XP_002283725.1|","PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis vinifera] >gi|296086245|emb|CBI31686.3| unnamed protein product [Vitis vinifera]","gi|359486809|ref|XM_002283689.2|","PREDICTED: Vitis vinifera ribosomal RNA large subunit methyltransferase N-like (LOC100241081), mRNA","-","-","COG0820","Predicted Fe-S-cluster redox enzyme","K06941","vvi:100241081","23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]","GO:0001510//RNA methylation;GO:0006364//rRNA processing;GO:0009658//chloroplast organization;GO:0006399//tRNA metabolic process;GO:0045036//protein targeting to chloroplast","GO:0008173//RNA methyltransferase activity;GO:0051536//iron-sulfur cluster binding","GO:0005739//mitochondrion"]
[576,"CSE_Unigene15970","SW_Unigene22202","-","-","+(Mostly)",1083,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225450096|ref|XP_002278255.1|","PREDICTED: actin-related protein 7 [Vitis vinifera] >gi|297736268|emb|CBI24906.3| unnamed protein product [Vitis vinifera]","gi|225450095|ref|XM_002278219.1|","PREDICTED: Vitis vinifera actin-related protein 7-like (LOC100255047), mRNA","sp|Q8L4Y5|ARP7_ARATH","Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1","COG5277","Actin and related proteins","K05692","mtr:MTR_2g008050","actin beta/gamma 1","GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0050826//response to freezing;GO:0010227//floral organ abscission;GO:0010050//vegetative phase change;GO:0048825//cotyledon development;GO:0051301//cell division;GO:0009086//methionine biosynthetic process;GO:0009640//photomorphogenesis;GO:0010564//regulation of cell cycle process;GO:0019915//lipid storage;GO:0010182//sugar mediated signaling pathway;GO:0009933//meristem structural organization;GO:0016567//protein ubiquitination;GO:0009845//seed germination;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0048366//leaf development;GO:0009737//response to abscisic acid stimulus;GO:0009909//regulation of flower development;GO:0016568//chromatin modification;GO:0009616//virus induced gene silencing;GO:0010162//seed dormancy process","GO:0005200//structural constituent of cytoskeleton","GO:0005737//cytoplasm;GO:0005856//cytoskeleton;GO:0005634//nucleus"]
[577,"CSE_CL1920_Contig1","SW_CL3519_Contig1","-","-","+(Mostly)",2322,{"v":0.994,"d":"99.40%"},14,7,7,{"v":0.237082,"d":"0.237"},{"v":0.00929054,"d":"0.0093"},"gi|297736440|emb|CBI25311.3|","unnamed protein product [Vitis vinifera]","gi|349731427|emb|FQ394548.1|","Vitis vinifera clone SS0AFA20YB03","-","-","-","-","K12843","vvi:100248403","U4/U6 small nuclear ribonucleoprotein PRP3","GO:0000398//mRNA splicing, via spliceosome","-","GO:0046540//U4/U6 x U5 tri-snRNP complex"]
[578,"CSE_Unigene17009","SW_Unigene17649","-","-","+(Mostly)",1617,{"v":0.996,"d":"99.60%"},6,3,3,{"v":0.360099,"d":"0.360"},{"v":0.193896,"d":"0.1939"},"gi|225448729|ref|XP_002275465.1|","PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Vitis vinifera] >gi|297736469|emb|CBI25340.3| unnamed protein product [Vitis vinifera]","gi|359486321|ref|XM_002275429.2|","PREDICTED: Vitis vinifera uncharacterized LOC100243380 (LOC100243380), mRNA","sp|Q9ASX5|Y5520_ARATH","Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1 SV=1","COG0661","Predicted unusual protein kinase","K08869","vvi:100243380","aarF domain-containing kinase","GO:0015996//chlorophyll catabolic process;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0016310//phosphorylation;GO:0043085//positive regulation of catalytic activity","GO:0016301//kinase activity","GO:0010287//plastoglobule;GO:0005886//plasma membrane"]
[579,"CSE_CL6192_Contig2","SW_Unigene17624","-","-","+(Mostly)",1305,{"v":0.988,"d":"98.80%"},16,12,4,{"v":0.119499,"d":"0.119"},{"v":7.4571e-05,"d":"0.0001"},"gi|225448699|ref|XP_002275253.1|","PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]","gi|359486458|ref|XM_002275217.2|","PREDICTED: Vitis vinifera U-box domain-containing protein 62-like (LOC100262140), mRNA","sp|Q6DBN5|PUB62_ARATH","U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1","-","-","K14559","pop:POPTR_824677","U3 small nucleolar RNA-associated protein MPP10","-","-","-"]
[580,"CSE_CL529_Contig1","SW_CL8732_Contig4","-","-","+(Mostly)",681,{"v":0.991,"d":"99.10%"},6,3,3,{"v":0.332174,"d":"0.332"},{"v":0.169628,"d":"0.1696"},"gi|359486460|ref|XP_002275157.2|","PREDICTED: reticulon-like protein B16-like [Vitis vinifera] >gi|297736488|emb|CBI25359.3| unnamed protein product [Vitis vinifera]","gi|359486459|ref|XM_002275121.2|","PREDICTED: Vitis vinifera reticulon-like protein B16-like (LOC100255297), mRNA","sp|Q8GYH6|RTNLP_ARATH","Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1","-","-","K07748","ppp:PHYPADRAFT_145942","sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170]","-","-","GO:0005634//nucleus;GO:0016020//membrane;GO:0005783//endoplasmic reticulum"]
[581,"CSE_CL7782_Contig1","SW_Unigene14411","-","-","+(Mostly)",849,{"v":0.981,"d":"98.10%"},16,4,12,{"v":0.821572,"d":"0.822"},{"v":0.73981,"d":"0.7398"},"gi|359486344|ref|XP_002274406.2|","PREDICTED: dual specificity protein phosphatase 6-like [Vitis vinifera]","gi|359486343|ref|XM_002274370.2|","PREDICTED: Vitis vinifera dual specificity protein phosphatase 6-like (LOC100251903), mRNA","sp|Q9SRK5|LSF2_ARATH","Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana GN=LSF2 PE=2 SV=1","-","-","K14165","cme:CMT465C","dual specificity phosphatase [EC:3.1.3.16 3.1.3.48]","GO:0006470//protein dephosphorylation;GO:0005983//starch catabolic process;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity","GO:0050308//sugar-phosphatase activity;GO:0008138//protein tyrosine/serine/threonine phosphatase activity;GO:2001070//starch binding","GO:0009507//chloroplast"]
[582,"CSE_Unigene12907","SW_Unigene24084","-","-","+(Mostly)",2310,{"v":0.995,"d":"99.50%"},12,3,9,{"v":0.898092,"d":"0.898"},{"v":0.957302,"d":"0.9573"},"gi|225448540|ref|XP_002273561.1|","PREDICTED: ectonucleoside triphosphate diphosphohydrolase 1 [Vitis vinifera] >gi|297736560|emb|CBI25431.3| unnamed protein product [Vitis vinifera]","gi|225448539|ref|XM_002273525.1|","PREDICTED: Vitis vinifera ectonucleoside triphosphate diphosphohydrolase 1-like (LOC100258768), mRNA","sp|F4JSH1|APY7_ARATH","Probable apyrase 7 OS=Arabidopsis thaliana GN=APY7 PE=2 SV=1","COG5371","Golgi nucleoside diphosphatase","K01510","gmx:100807287","apyrase [EC:3.6.1.5]","-","GO:0016787//hydrolase activity","GO:0005634//nucleus"]
[583,"CSE_Unigene16122","SW_Unigene18301","-","-","+(Mostly)",1386,{"v":0.994,"d":"99.40%"},9,4,5,{"v":0.373996,"d":"0.374"},{"v":0.131742,"d":"0.1317"},"gi|225448485|ref|XP_002271550.1|","PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] >gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera]","gi|359486392|ref|XM_002271514.2|","PREDICTED: Vitis vinifera GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like (LOC100250164), mRNA","sp|Q9XEE9|ALG11_ARATH","GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2","COG0438","Glycosyltransferase","K03844","vvi:100250164","alpha-1,2-mannosyltransferase [EC:2.4.1.-]","GO:0006970//response to osmotic stress;GO:0009737//response to abscisic acid stimulus;GO:0009832//plant-type cell wall biogenesis;GO:0006487//protein N-linked glycosylation","GO:0016757//transferase activity, transferring glycosyl groups","GO:0005576//extracellular region;GO:0005789//endoplasmic reticulum membrane"]
[584,"CSE_Unigene15550","SW_CL8886_Contig1","-","-","+(Mostly)",768,{"v":0.996,"d":"99.60%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225448412|ref|XP_002270907.1|","PREDICTED: GDSL esterase/lipase CPRD49 [Vitis vinifera] >gi|297736617|emb|CBI25488.3| unnamed protein product [Vitis vinifera]","gi|225448411|ref|XM_002270871.1|","PREDICTED: Vitis vinifera GDSL esterase/lipase CPRD49-like (LOC100267342), mRNA","sp|Q9SRM5|CPR49_ARATH","GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1","COG2755","Lysophospholipase L1 and related esterases","-","-","-","GO:0006629//lipid metabolic process","GO:0004091//carboxylesterase activity","GO:0048046//apoplast"]
[585,"CSE_Unigene1034","SW_CL3472_Contig1","-","-","+(Mostly)",774,{"v":0.99,"d":"99.00%"},8,4,4,{"v":0.35886,"d":"0.359"},{"v":0.135513,"d":"0.1355"},"gi|225448353|ref|XP_002267471.1|","PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Vitis vinifera] >gi|297736644|emb|CBI25515.3| unnamed protein product [Vitis vinifera]","gi|359486427|ref|XM_002267435.2|","PREDICTED: Vitis vinifera hydroxyacylglutathione hydrolase cytoplasmic-like (LOC100243205), mRNA","sp|O24496|GLO2C_ARATH","Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2","COG0491","Zn-dependent hydrolases, including glyoxylases","K01069","vvi:100243205","hydroxyacylglutathione hydrolase [EC:3.1.2.6]","GO:0006750//glutathione biosynthetic process;GO:0006623//protein targeting to vacuole;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0019243//methylglyoxal catabolic process to D-lactate","GO:0008270//zinc ion binding;GO:0004416//hydroxyacylglutathione hydrolase activity","GO:0005829//cytosol"]
[586,"CSE_CL2107_Contig2","SW_CL6894_Contig2","-","-","+(Mostly)",1455,{"v":0.993,"d":"99.30%"},10,3,7,{"v":0.90238,"d":"0.902"},{"v":0.962447,"d":"0.9624"},"gi|225448347|ref|XP_002267035.1|","PREDICTED: uncharacterized protein LOC100243301 [Vitis vinifera]","gi|359486429|ref|XM_002266999.2|","PREDICTED: Vitis vinifera uncharacterized LOC100243301 (LOC100243301), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","-","-","-","GO:0016556//mRNA modification","GO:0003824//catalytic activity","GO:0009941//chloroplast envelope"]
[587,"CSE_Unigene12819","SW_Unigene23565","-","-","+(Mostly)",1014,{"v":0.983,"d":"98.30%"},17,7,10,{"v":0.586138,"d":"0.586"},{"v":0.285474,"d":"0.2855"},"gi|225463727|ref|XP_002264488.1|","PREDICTED: cytosolic 5&apos;-nucleotidase 3 [Vitis vinifera] >gi|296084428|emb|CBI24987.3| unnamed protein product [Vitis vinifera]","gi|225463726|ref|XM_002264452.1|","PREDICTED: Vitis vinifera cytosolic 5'-nucleotidase 3-like (LOC100242328), mRNA","-","-","-","-","-","-","-","-","GO:0000287//magnesium ion binding;GO:0008253//5'-nucleotidase activity","GO:0005829//cytosol;GO:0009507//chloroplast"]
[588,"CSE_Unigene17762","SW_Unigene15372","-","-","+(Mostly)",930,{"v":0.992,"d":"99.20%"},7,3,4,{"v":0.363251,"d":"0.363"},{"v":0.174887,"d":"0.1749"},"gi|225464393|ref|XP_002266882.1|","PREDICTED: uricase-2 [Vitis vinifera] >gi|296084452|emb|CBI25011.3| unnamed protein product [Vitis vinifera]","gi|359487026|ref|XM_002266846.2|","PREDICTED: Vitis vinifera urate oxidase (LOC100232988), mRNA","sp|P53763|URIC_PHAVU","Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2","COG3648","Uricase (urate oxidase)","K00365","vvi:100232988","urate oxidase [EC:1.7.3.3]","GO:0006144//purine nucleobase metabolic process;GO:0019628//urate catabolic process;GO:0055114//oxidation-reduction process","GO:0004846//urate oxidase activity","GO:0005777//peroxisome"]
[589,"CSE_CL2768_Contig3","SW_CL3471_Contig1","-","-","+(Mostly)",861,{"v":0.993,"d":"99.30%"},6,1,5,{"v":2.11458,"d":"2.115"},{"v":0.555047,"d":"0.5550"},"gi|225448861|ref|XP_002269950.1|","PREDICTED: probable phytol kinase 1, chloroplastic [Vitis vinifera]","gi|359486889|ref|XM_002269914.2|","PREDICTED: Vitis vinifera probable phytol kinase 1, chloroplastic-like (LOC100246189), mRNA","sp|Q2N2K1|PHYK1_SOYBN","Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1","COG0170","Dolichol kinase","K15892","sbi:SORBI_03g038850","farnesol kinase [EC:2.7.1.-]","GO:0010189//vitamin E biosynthetic process;GO:0016310//phosphorylation;GO:0008654//phospholipid biosynthetic process","GO:0004605//phosphatidate cytidylyltransferase activity;GO:0010276//phytol kinase activity","GO:0031969//chloroplast membrane;GO:0016021//integral to membrane"]
[590,"CSE_Unigene11257","SW_Unigene4186","-","-","+(Mostly)",933,{"v":0.99,"d":"99.00%"},9,6,3,{"v":0.125731,"d":"0.126"},{"v":0.00324585,"d":"0.0032"},"gi|296090379|emb|CBI40198.3|","unnamed protein product [Vitis vinifera]","gi|359486924|ref|XM_002262970.2|","PREDICTED: Vitis vinifera mRNA cap guanine-N7 methyltransferase 2-like (LOC100252253), mRNA","sp|Q5HZ60|MCES2_ARATH","mRNA cap guanine-N7 methyltransferase 2 OS=Arabidopsis thaliana GN=At3g52210 PE=2 SV=1","COG0500","SAM-dependent methyltransferases","K00565","vvi:100252253","mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]","GO:0006370//7-methylguanosine mRNA capping;GO:0036265//RNA (guanine-N7)-methylation","GO:0004482//mRNA (guanine-N7-)-methyltransferase activity;GO:0003723//RNA binding","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005634//nucleus"]
[591,"CSE_Unigene7264","SW_Unigene16714","-","-","+(Mostly)",1140,{"v":0.985,"d":"98.50%"},17,9,8,{"v":0.309634,"d":"0.310"},{"v":0.016188,"d":"0.0162"},"gi|147805065|emb|CAN69181.1|","hypothetical protein VITISV_004338 [Vitis vinifera]","gi|147805064|emb|AM429565.2|","Vitis vinifera contig VV79X002081.2, whole genome shotgun sequence","-","-","-","-","-","-","-","GO:0015824//proline transport","-","-"]
[592,"CSE_Unigene14802","SW_Unigene18847","-","-","+(Mostly)",1896,{"v":0.983,"d":"98.30%"},32,{"v":12.6398,"d":"13"},{"v":19.3602,"d":"19"},{"v":0.546997,"d":"0.547"},{"v":0.103131,"d":"0.1031"},"gi|296087849|emb|CBI35105.3|","unnamed protein product [Vitis vinifera]","gi|359487167|ref|XM_002263918.2|","PREDICTED: Vitis vinifera probable protein arginine N-methyltransferase 3-like (LOC100253139), mRNA","sp|Q0WVD6|ANM3_ARATH","Probable protein arginine N-methyltransferase 3 OS=Arabidopsis thaliana GN=PRMT3 PE=2 SV=1","COG0500","SAM-dependent methyltransferases","K11436","vvi:100253139","protein arginine N-methyltransferase 3 [EC:2.1.1.-]","GO:0000741//karyogamy;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0001510//RNA methylation;GO:0009560//embryo sac egg cell differentiation;GO:0042991//transcription factor import into nucleus;GO:0006479//protein methylation","GO:0008276//protein methyltransferase activity","GO:0005829//cytosol"]
[593,"CSE_Unigene12610","SW_Unigene21855","-","-","+(Mostly)",885,{"v":0.994,"d":"99.40%"},5,2,3,{"v":0.558119,"d":"0.558"},{"v":0.411481,"d":"0.4115"},"gi|225451038|ref|XP_002284939.1|","PREDICTED: UPF0603 protein At1g54780, chloroplastic [Vitis vinifera] >gi|296088289|emb|CBI36734.3| unnamed protein product [Vitis vinifera]","gi|225451037|ref|XM_002284903.1|","PREDICTED: Vitis vinifera uncharacterized LOC100254639 (LOC100254639), mRNA","sp|Q9ZVL6|U603_ARATH","UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1","COG1512","Beta-propeller domains of methanol dehydrogenase type","-","-","-","GO:0010218//response to far red light;GO:0016117//carotenoid biosynthetic process;GO:0035304//regulation of protein dephosphorylation;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0010114//response to red light;GO:0010207//photosystem II assembly;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015995//chlorophyll biosynthetic process;GO:0009773//photosynthetic electron transport in photosystem I;GO:0009637//response to blue light;GO:0019761//glucosinolate biosynthetic process;GO:0010206//photosystem II repair;GO:0019344//cysteine biosynthetic process;GO:0009657//plastid organization;GO:0006364//rRNA processing","GO:0003993//acid phosphatase activity","GO:0016021//integral to membrane;GO:0009543//chloroplast thylakoid lumen;GO:0009535//chloroplast thylakoid membrane"]
[594,"CSE_Unigene17764","SW_Unigene14360","-","-","+(Mostly)",756,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225452157|ref|XP_002263692.1|","PREDICTED: phosducin-like protein 3 [Vitis vinifera] >gi|296090246|emb|CBI40065.3| unnamed protein product [Vitis vinifera]","gi|359488611|ref|XM_002263656.2|","PREDICTED: Vitis vinifera phosducin-like protein 3 (LOC100244131), mRNA","-","-","COG0526","Thiol-disulfide isomerase and thioredoxins","-","-","-","-","-","GO:0005737//cytoplasm"]
[595,"CSE_Unigene16609","SW_Unigene14328","-","-","+(Mostly)",1257,{"v":0.985,"d":"98.50%"},19,{"v":8.71877,"d":"9"},{"v":10.2812,"d":"10"},{"v":0.410544,"d":"0.411"},{"v":0.056855,"d":"0.0569"},"gi|225452159|ref|XP_002263731.1|","PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera] >gi|296090247|emb|CBI40066.3| unnamed protein product [Vitis vinifera]","gi|225452158|ref|XM_002263695.1|","PREDICTED: Vitis vinifera COP9 signalosome complex subunit 3-like (LOC100266172), mRNA","sp|Q8W575|CSN3_ARATH","COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2","-","-","K12177","vvi:100266172","COP9 signalosome complex subunit 3","GO:0000085//G2 phase of mitotic cell cycle;GO:0010388//cullin deneddylation","-","GO:0000502//proteasome complex"]
[596,"CSE_Unigene1628","SW_Unigene16439","-","-","+(Mostly)",1782,{"v":0.989,"d":"98.90%"},20,12,8,{"v":0.237845,"d":"0.238"},{"v":0.00161778,"d":"0.0016"},"gi|225452924|ref|XP_002284130.1|","PREDICTED: UPF0301 protein Cpha266_0885-like isoform 1 [Vitis vinifera]","gi|359488955|ref|XM_003633798.1|","PREDICTED: Vitis vinifera UPF0301 protein Cpha266_0885-like, transcript variant 2 (LOC100261075), mRNA","-","-","COG1678","Putative transcriptional regulator","K07735","gmx:100783218","putative transcriptional regulator","-","-","GO:0009543//chloroplast thylakoid lumen"]
[597,"CSE_Unigene19702","SW_Unigene22634","-","-","+(Mostly)",1746,{"v":0.99,"d":"99.00%"},17,7,10,{"v":0.457744,"d":"0.458"},{"v":0.141541,"d":"0.1415"},"gi|359487812|ref|XP_002277348.2|","PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic [Vitis vinifera]","gi|359487811|ref|XM_002277312.2|","PREDICTED: Vitis vinifera zeta-carotene desaturase, chloroplastic/chromoplastic-like (LOC100245154), mRNA","sp|Q9FV46|ZDS_TARER","Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1","COG3349","Uncharacterized conserved protein","K00514","vvi:100245154","zeta-carotene desaturase [EC:1.3.5.6]","GO:0016117//carotenoid biosynthetic process;GO:0055114//oxidation-reduction process","GO:0016788//hydrolase activity, acting on ester bonds;GO:0016719//carotene 7,8-desaturase activity;GO:0000166//nucleotide binding","-"]
[598,"CSE_Unigene17745","SW_CL4981_Contig2","-","-","+(Mostly)",633,{"v":0.989,"d":"98.90%"},7,3,4,{"v":0.347312,"d":"0.347"},{"v":0.161336,"d":"0.1613"},"gi|359487818|ref|XP_002277092.2|","PREDICTED: MKI67 FHA domain-interacting nucleolar phosphoprotein-like [Vitis vinifera] >gi|298204899|emb|CBI34206.3| unnamed protein product [Vitis vinifera]","gi|359487817|ref|XM_002277056.2|","PREDICTED: Vitis vinifera MKI67 FHA domain-interacting nucleolar phosphoprotein-like (LOC100255455), mRNA","sp|P19682|ROC3_NICSY","28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1","COG0724","RNA-binding proteins (RRM domain)","K14838","vvi:100255455","nucleolar protein 15","GO:0001510//RNA methylation;GO:0006606//protein import into nucleus;GO:0006333//chromatin assembly or disassembly;GO:0051604//protein maturation","GO:0003723//RNA binding;GO:0000166//nucleotide binding","GO:0005739//mitochondrion;GO:0005730//nucleolus;GO:0009507//chloroplast"]
[599,"CSE_CL2403_Contig2","SW_CL2432_Contig1","-","-","+(Mostly)",687,{"v":0.994,"d":"99.40%"},4,3,1,{"v":0.10532,"d":"0.105"},{"v":0.0427635,"d":"0.0428"},"gi|359487996|ref|XP_002284948.2|","PREDICTED: 39S ribosomal protein L45, mitochondrial-like [Vitis vinifera]","gi|349716036|emb|FQ392043.1|","Vitis vinifera clone SS0AFA7YM11","-","-","COG4395","Uncharacterized protein conserved in bacteria","-","-","-","GO:0006886//intracellular protein transport","GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity","GO:0005840//ribosome;GO:0005744//mitochondrial inner membrane presequence translocase complex"]
[600,"CSE_Unigene1855","SW_Unigene16448","-","-","+(Mostly)",1179,{"v":0.995,"d":"99.50%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|225465593|ref|XP_002264983.1|","PREDICTED: peroxisome biogenesis protein 12 [Vitis vinifera] >gi|302143588|emb|CBI22341.3| unnamed protein product [Vitis vinifera]","gi|359488085|ref|XM_002264947.2|","PREDICTED: Vitis vinifera peroxisome biogenesis protein 12-like (LOC100257920), mRNA","sp|Q9M841|PEX12_ARATH","Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana GN=PEX12 PE=1 SV=2","-","-","K13345","vvi:100257920","peroxin-12","GO:0051788//response to misfolded protein;GO:0006635//fatty acid beta-oxidation;GO:0043161//proteasomal ubiquitin-dependent protein catabolic process;GO:0016558//protein import into peroxisome matrix;GO:0009407//toxin catabolic process;GO:0080129//proteasome core complex assembly;GO:0048598//embryonic morphogenesis","GO:0008270//zinc ion binding;GO:0008022//protein C-terminus binding","GO:0005779//integral to peroxisomal membrane"]
[601,"CSE_Unigene10964","SW_CL3274_Contig1","-","-","+(Mostly)",2217,{"v":0.989,"d":"98.90%"},25,12,13,{"v":0.334882,"d":"0.335"},{"v":0.00690748,"d":"0.0069"},"gi|225465631|ref|XP_002268271.1|","PREDICTED: meiotically up-regulated gene 71 protein [Vitis vinifera] >gi|302143608|emb|CBI22361.3| unnamed protein product [Vitis vinifera]","gi|359488115|ref|XM_002268235.2|","PREDICTED: Vitis vinifera meiotically up-regulated gene 71 protein-like (LOC100244247), mRNA","-","-","COG2102","Predicted ATPases of PP-loop superfamily","K06927","cme:CMS447C",null,"-","GO:0004521//endoribonuclease activity","-"]
[602,"CSE_CL6618_Contig2","SW_CL6758_Contig2","-","-","+(Mostly)",1329,{"v":0.997,"d":"99.70%"},4,3,1,{"v":0.107748,"d":"0.108"},{"v":0.0443393,"d":"0.0443"},"gi|225453195|ref|XP_002276386.1|","PREDICTED: uncharacterized protein LOC100262118 [Vitis vinifera] >gi|296087137|emb|CBI33511.3| unnamed protein product [Vitis vinifera]","gi|225453194|ref|XM_002276350.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262118 (LOC100262118), mRNA","-","-","-","-","-","-","-","GO:0016042//lipid catabolic process","GO:0005516//calmodulin binding;GO:0004806//triglyceride lipase activity;GO:0004091//carboxylesterase activity","GO:0005886//plasma membrane"]
[603,"CSE_Unigene13509","SW_CL4909_Contig1","-","-","+(Mostly)",996,{"v":0.995,"d":"99.50%"},5,1,4,{"v":1.42612,"d":"1.426"},{"v":0.781425,"d":"0.7814"},"gi|296087176|emb|CBI33550.3|","unnamed protein product [Vitis vinifera]","gi|359488202|ref|XM_002271457.2|","PREDICTED: Vitis vinifera pyridoxal kinase-like (LOC100251978), mRNA","sp|Q8W1X2|PDXK_ARATH","Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=1 SV=2","COG2240","Pyridoxal/pyridoxine/pyridoxamine kinase","K00868","mtr:MTR_5g079730","pyridoxine kinase [EC:2.7.1.35]","GO:0010054//trichoblast differentiation;GO:0008615//pyridoxine biosynthetic process;GO:0042538//hyperosmotic salinity response;GO:0009443//pyridoxal 5'-phosphate salvage;GO:0016310//phosphorylation","GO:0008478//pyridoxal kinase activity","GO:0005829//cytosol"]
[604,"CSE_Unigene16692","SW_CL1485_Contig1","-","-","+(Mostly)",1035,{"v":0.987,"d":"98.70%"},13,6,7,{"v":0.405514,"d":"0.406"},{"v":0.0293706,"d":"0.0294"},"gi|225452057|ref|XP_002283938.1|","PREDICTED: uncharacterized protein LOC100258368 [Vitis vinifera] >gi|296087267|emb|CBI33641.3| unnamed protein product [Vitis vinifera]","gi|225452056|ref|XM_002283902.1|","PREDICTED: Vitis vinifera uncharacterized LOC100258368 (LOC100258368), mRNA","sp|F4IQJ2|ELP5_ARATH","Elongator complex protein 5 OS=Arabidopsis thaliana GN=ELP5 PE=1 SV=1","-","-","-","-","-","GO:0006626//protein targeting to mitochondrion","-","GO:0005634//nucleus"]
[605,"CSE_Unigene14815","SW_Unigene22099","-","-","+(Mostly)",966,{"v":0.996,"d":"99.60%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225450774|ref|XP_002279451.1|","PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Vitis vinifera] >gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]","gi|225450773|ref|XM_002279415.1|","PREDICTED: Vitis vinifera ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like (LOC100249495), mRNA","sp|Q8L770|CLPR3_ARATH","ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1","COG0740","Protease subunit of ATP-dependent Clp proteases","K01358","ppp:PHYPADRAFT_144625","ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]","GO:0006508//proteolysis;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0004252//serine-type endopeptidase activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0009579//thylakoid;GO:0005739//mitochondrion"]
[606,"CSE_Unigene15466","SW_Unigene8525","-","-","+(Mostly)",543,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|359487647|ref|XP_002283392.2|","PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]","gi|349719290|emb|FQ397592.1|","Vitis vinifera clone SS0AEB6YF09","-","-","COG2016","Predicted RNA-binding protein (contains PUA domain)","K07575","pop:POPTR_662670","PUA domain protein","-","GO:0003723//RNA binding","-"]
[607,"CSE_Unigene4592","SW_Unigene3870","-","-","+(Mostly)",972,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.359163,"d":"0.359"},{"v":0.281985,"d":"0.2820"},"gi|147807582|emb|CAN66319.1|","hypothetical protein VITISV_040623 [Vitis vinifera]","gi|349712262|emb|FQ396534.1|","Vitis vinifera clone SS0AEB9YJ21","sp|Q9LZ98|AB20I_ARATH","ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1","COG4586","ABC-type uncharacterized transport system, ATPase component","K12608","vvi:100259555","CCR4-NOT complex subunit CAF16","GO:0009813//flavonoid biosynthetic process;GO:0009744//response to sucrose stimulus;GO:0006007//glucose catabolic process;GO:0080167//response to karrikin;GO:0010224//response to UV-B;GO:0006200//ATP catabolic process","GO:0015416//organic phosphonate transmembrane-transporting ATPase activity;GO:0005524//ATP binding","GO:0005886//plasma membrane"]
[608,"CSE_Unigene14455","SW_CL3377_Contig3","-","-","+(Mostly)",1557,{"v":0.996,"d":"99.60%"},6,5,1,{"v":0.0696493,"d":"0.070"},{"v":0.00521329,"d":"0.0052"},"gi|225452356|ref|XP_002274862.1|","PREDICTED: mitogen-activated protein kinase kinase 6 [Vitis vinifera] >gi|296087617|emb|CBI34873.3| unnamed protein product [Vitis vinifera]","gi|359488664|ref|XM_002274826.2|","PREDICTED: Vitis vinifera mitogen-activated protein kinase kinase 6-like (LOC100257776), mRNA","sp|Q9FJV0|M2K6_ARATH","Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1","COG0515","Serine/threonine protein kinase","K04368","aly:ARALYDRAFT_495747","mitogen-activated protein kinase kinase 1 [EC:2.7.12.2]","GO:0009864//induced systemic resistance, jasmonic acid mediated signaling pathway;GO:0006468//protein phosphorylation;GO:0009866//induced systemic resistance, ethylene mediated signaling pathway;GO:0009814//defense response, incompatible interaction;GO:0000165//MAPK cascade","GO:0004707//MAP kinase activity;GO:0004708//MAP kinase kinase activity;GO:0005524//ATP binding","GO:0005886//plasma membrane"]
[609,"CSE_Unigene13187","SW_Unigene11759","-","-","+(Mostly)",525,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.329489,"d":"0.329"},{"v":0.374181,"d":"0.3742"},"gi|225452434|ref|XP_002277349.1|","PREDICTED: universal stress protein A-like protein [Vitis vinifera] >gi|296087653|emb|CBI34909.3| unnamed protein product [Vitis vinifera]","gi|359488693|ref|XM_002277313.2|","PREDICTED: Vitis vinifera universal stress protein A-like protein (LOC100252494), mRNA","sp|Q8LGG8|USPAL_ARATH","Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2","COG0589","Universal stress protein UspA and related nucleotide-binding proteins","-","-","-","GO:0006950//response to stress;GO:0002238//response to molecule of fungal origin","-","GO:0005737//cytoplasm;GO:0005886//plasma membrane"]
[610,"CSE_Unigene3470","SW_CL4400_Contig1","-","-","+(Mostly)",450,{"v":0.991,"d":"99.10%"},4,1,3,{"v":0.985267,"d":"0.985"},{"v":0.676742,"d":"0.6767"},"gi|147852952|emb|CAN81268.1|","hypothetical protein VITISV_006143 [Vitis vinifera]","gi|359488867|ref|XM_002280548.2|","PREDICTED: Vitis vinifera zinc finger AN1 domain-containing stress-associated protein 12-like (LOC100245574), mRNA","sp|Q67YE6|SAP12_ARATH","Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2","COG3582","Predicted nucleic acid binding protein containing the AN1-type Zn-finger","-","-","-","GO:0010363//regulation of plant-type hypersensitive response;GO:0009414//response to water deprivation;GO:0009867//jasmonic acid mediated signaling pathway;GO:0010286//heat acclimation;GO:0009611//response to wounding;GO:0042538//hyperosmotic salinity response;GO:0009733//response to auxin stimulus;GO:0010200//response to chitin;GO:0006612//protein targeting to membrane;GO:0009863//salicylic acid mediated signaling pathway;GO:0010583//response to cyclopentenone;GO:0009738//abscisic acid mediated signaling pathway;GO:0009723//response to ethylene stimulus;GO:0009407//toxin catabolic process","GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[611,"CSE_CL7181_Contig1","SW_Unigene13470","-","-","+(Mostly)",1320,{"v":0.992,"d":"99.20%"},10,8,2,{"v":0.0852819,"d":"0.085"},{"v":0.00049032,"d":"0.0005"},"gi|296082240|emb|CBI21245.3|","unnamed protein product [Vitis vinifera]","gi|359488542|ref|XM_002278002.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244618 (LOC100244618), mRNA","-","-","-","-","-","-","-","GO:0015693//magnesium ion transport","GO:0015095//magnesium ion transmembrane transporter activity","GO:0005886//plasma membrane"]
[612,"CSE_Unigene16359","SW_Unigene7488","-","-","+(Mostly)",2091,{"v":0.99,"d":"99.00%"},20,16,4,{"v":0.0834664,"d":"0.083"},{"v":4.4614e-07,"d":"0.0000"},"gi|225451661|ref|XP_002276313.1|","PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]","gi|225451660|ref|XM_002276277.1|","PREDICTED: Vitis vinifera transcription-repair-coupling factor-like (LOC100251594), mRNA","sp|Q0DM51|RH3_ORYSJ","DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2","COG1197","Transcription-repair coupling factor (superfamily II helicase)","K03655","smo:SELMODRAFT_444354","ATP-dependent DNA helicase RecG [EC:3.6.4.12]","GO:0006783//heme biosynthetic process;GO:0006281//DNA repair","GO:0003684//damaged DNA binding;GO:0008026//ATP-dependent helicase activity;GO:0005524//ATP binding","GO:0005634//nucleus"]
[613,"CSE_Unigene16254","SW_Unigene7803","-","-","+(Mostly)",846,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.140248,"d":"0.140"},{"v":0.113123,"d":"0.1131"},"gi|225451633|ref|XP_002276803.1|","PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera] >gi|296082256|emb|CBI21261.3| unnamed protein product [Vitis vinifera]","gi|225451632|ref|XM_002276767.1|","PREDICTED: Vitis vinifera rRNA-processing protein UTP23 homolog-like (LOC100251430), mRNA","-","-","COG1412","Uncharacterized proteins of PilT N-term./Vapc superfamily","K14773","vvi:100251430","U3 small nucleolar RNA-associated protein 23","GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0009793//embryo development ending in seed dormancy","-","-"]
[614,"CSE_Unigene16043","SW_Unigene14009","-","-","+(Mostly)",1167,{"v":0.997,"d":"99.70%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225451511|ref|XP_002272485.1|","PREDICTED: actin-related protein 2 [Vitis vinifera] >gi|296082315|emb|CBI21320.3| unnamed protein product [Vitis vinifera]","gi|359488459|ref|XM_002272449.2|","PREDICTED: Vitis vinifera actin-related protein 2-like (LOC100242912), mRNA","sp|Q9LSD6|ARP2_ARATH","Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1","COG5277","Actin and related proteins","K05692","cre:CHLREDRAFT_24392","actin beta/gamma 1","GO:0009825//multidimensional cell growth;GO:0006412//translation;GO:0052546//cell wall pectin metabolic process;GO:0034314//Arp2/3 complex-mediated actin nucleation;GO:0010090//trichome morphogenesis;GO:0009165//nucleotide biosynthetic process;GO:0052541//plant-type cell wall cellulose metabolic process","GO:0003735//structural constituent of ribosome;GO:0005524//ATP binding;GO:0005200//structural constituent of cytoskeleton","GO:0016020//membrane;GO:0022625//cytosolic large ribosomal subunit;GO:0005885//Arp2/3 protein complex"]
[615,"CSE_Unigene9373","SW_Unigene23184","-","-","+(Mostly)",849,{"v":0.993,"d":"99.30%"},6,1,5,{"v":1.62454,"d":"1.625"},{"v":0.815256,"d":"0.8153"},"gi|225451493|ref|XP_002274500.1|","PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis vinifera] >gi|296082322|emb|CBI21327.3| unnamed protein product [Vitis vinifera]","gi|225451492|ref|XM_002274464.1|","PREDICTED: Vitis vinifera ABC transporter I family member 11, chloroplastic-like (LOC100242979), mRNA","sp|Q8LEF6|AB11I_ARATH","ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana GN=ABCI11 PE=2 SV=1","COG1122","ABC-type cobalt transport system, ATPase component","K02065","pop:POPTR_275971","putative ABC transport system ATP-binding protein","GO:0006200//ATP catabolic process","GO:0005524//ATP binding;GO:0015408","GO:0009941//chloroplast envelope;GO:0005886//plasma membrane"]
[616,"CSE_Unigene12401","SW_Unigene7396","-","-","+(Mostly)",753,{"v":0.988,"d":"98.80%"},9,4,5,{"v":0.284633,"d":"0.285"},{"v":0.0689081,"d":"0.0689"},"gi|225451465|ref|XP_002270554.1|","PREDICTED: zinc finger protein 511 [Vitis vinifera] >gi|147815339|emb|CAN67772.1| hypothetical protein VITISV_010523 [Vitis vinifera] >gi|296082337|emb|CBI21342.3| unnamed protein product [Vitis vinifera]","gi|225451464|ref|XM_002270518.1|","PREDICTED: Vitis vinifera zinc finger protein 511-like (LOC100249687), mRNA","-","-","-","-","-","-","-","-","GO:0003676//nucleic acid binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[617,"CSE_Unigene802","SW_Unigene14353","-","-","+(Mostly)",1179,{"v":0.996,"d":"99.60%"},5,3,2,{"v":0.205298,"d":"0.205"},{"v":0.0885753,"d":"0.0886"},"gi|225451433|ref|XP_002269273.1|","PREDICTED: sulfite oxidase [Vitis vinifera] >gi|147769958|emb|CAN70050.1| hypothetical protein VITISV_013372 [Vitis vinifera] >gi|296082351|emb|CBI21356.3| unnamed protein product [Vitis vinifera]","gi|359488495|ref|XM_002269237.2|","PREDICTED: Vitis vinifera sulfite oxidase-like (LOC100263528), mRNA","sp|Q9S850|SUOX_ARATH","Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1","COG2041","Sulfite oxidase and related enzymes","K00387","vvi:100263528","sulfite oxidase [EC:1.8.3.1]","GO:0006790//sulfur compound metabolic process;GO:0010477//response to sulfur dioxide;GO:0015994//chlorophyll metabolic process;GO:0055114//oxidation-reduction process","GO:0009055//electron carrier activity;GO:0008482//sulfite oxidase activity;GO:0030151//molybdenum ion binding","GO:0005777//peroxisome;GO:0009507//chloroplast;GO:0005829//cytosol;GO:0005739//mitochondrion"]
[618,"CSE_Unigene12977","SW_Unigene14429","-","-","+(Mostly)",798,{"v":0.992,"d":"99.20%"},6,5,1,{"v":0.068062,"d":"0.068"},{"v":0.00486518,"d":"0.0049"},"gi|225451954|ref|XP_002283161.1|","PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Vitis vinifera]","gi|349719951|emb|FQ387765.1|","Vitis vinifera clone SS0AEB25YG17","sp|Q9SWS1|ACFR2_ARATH","Probable transmembrane ascorbate ferrireductase 2 OS=Arabidopsis thaliana GN=CYB561B PE=2 SV=1","-","-","K08360","vvi:100251417","cytochrome b-561","GO:0009750//response to fructose stimulus;GO:0009744//response to sucrose stimulus;GO:0009749//response to glucose stimulus","GO:0008805//carbon-monoxide oxygenase activity","GO:0016021//integral to membrane;GO:0005794//Golgi apparatus"]
[619,"CSE_Unigene497","SW_Unigene11024","-","-","+(Mostly)",1818,{"v":0.984,"d":"98.40%"},11,7,4,{"v":0.195489,"d":"0.195"},{"v":0.00871767,"d":"0.0087"},"gi|359488350|ref|XP_002279064.2|","PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis vinifera]","gi|359488349|ref|XM_002279028.2|","PREDICTED: Vitis vinifera ATP-dependent zinc metalloprotease FtsH-like (LOC100249724), mRNA","sp|Q1PDW5|FTSH6_ARATH","ATP-dependent zinc metalloprotease FTSH 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1","COG0465","ATP-dependent Zn proteases","K03798","sbi:SORBI_10g008130","cell division protease FtsH [EC:3.4.24.-]","GO:0051301//cell division;GO:0006508//proteolysis","GO:0008270//zinc ion binding;GO:0004222//metalloendopeptidase activity;GO:0005524//ATP binding;GO:0008568//microtubule-severing ATPase activity","GO:0016021//integral to membrane;GO:0009941//chloroplast envelope;GO:0005886//plasma membrane"]
[620,"CSE_Unigene15752","SW_CL2612_Contig1","-","-","+(Mostly)",1428,{"v":0.996,"d":"99.60%"},5,4,1,{"v":0.0786154,"d":"0.079"},{"v":0.0126379,"d":"0.0126"},"gi|225451821|ref|XP_002281545.1|","PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis vinifera] >gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera]","gi|359488379|ref|XM_002281509.2|","PREDICTED: Vitis vinifera probable E3 ubiquitin-protein ligase HERC1-like (LOC100254890), mRNA","sp|Q9FN03|UVR8_ARATH","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1","COG5184","Alpha-tubulin suppressor and related RCC1 domain-containing proteins","K11493","ota:Ot03g05690","regulator of chromosome condensation","-","GO:0008536//Ran GTPase binding","-"]
[621,"CSE_Unigene30","SW_Unigene13763","-","-","+(Mostly)",966,{"v":0.978,"d":"97.80%"},21,13,8,{"v":0.212343,"d":"0.212"},{"v":0.000550292,"d":"0.0006"},"gi|359488385|ref|XP_003633751.1|","PREDICTED: solute carrier family 25 member 44-like isoform 2 [Vitis vinifera] >gi|298204467|emb|CBI16947.3| unnamed protein product [Vitis vinifera]","gi|349726449|emb|FQ382659.1|","Vitis vinifera clone SS0ABG49YH22","sp|Q9FHX2|MFL1_ARATH","Protein MITOFERRINLIKE 1, chloroplastic OS=Arabidopsis thaliana GN=MFL1 PE=2 SV=1","-","-","K15121","vvi:100254860","solute carrier family 25, member 44","GO:0055085//transmembrane transport;GO:0006839//mitochondrial transport","-","GO:0005743//mitochondrial inner membrane;GO:0016021//integral to membrane"]
[622,"CSE_Unigene17278","SW_CL6640_Contig1","-","-","+(Mostly)",768,{"v":0.99,"d":"99.00%"},8,{"v":2.51071,"d":"3"},{"v":5.48929,"d":"5"},{"v":0.883948,"d":"0.884"},{"v":0.630962,"d":"0.6310"},"gi|225453422|ref|XP_002274957.1|","PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 6, chloroplastic [Vitis vinifera] >gi|297734593|emb|CBI16644.3| unnamed protein product [Vitis vinifera]","gi|225453421|ref|XM_002274921.1|","PREDICTED: Vitis vinifera FKBP-type peptidyl-prolyl cis-trans isomerase 6, chloroplastic-like (LOC100258093), mRNA","sp|Q0WRJ7|FK202_ARATH","Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1","COG0545","FKBP-type peptidyl-prolyl cis-trans isomerases 1","K01802","ath:AT2G43560","peptidylprolyl isomerase [EC:5.2.1.8]","GO:0006457//protein folding;GO:0035304//regulation of protein dephosphorylation;GO:0010207//photosystem II assembly;GO:0009902//chloroplast relocation;GO:0019761//glucosinolate biosynthetic process;GO:0055114//oxidation-reduction process;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0000413//protein peptidyl-prolyl isomerization;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0005528//FK506 binding;GO:0016491//oxidoreductase activity;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0016020//membrane;GO:0005576//extracellular region;GO:0009543//chloroplast thylakoid lumen"]
[623,"CSE_Unigene19136","SW_Unigene12589","-","-","+(Mostly)",1743,{"v":0.989,"d":"98.90%"},20,11,9,{"v":0.280382,"d":"0.280"},{"v":0.00485586,"d":"0.0049"},"gi|297734594|emb|CBI16645.3|","unnamed protein product [Vitis vinifera]","gi|359489191|ref|XM_002272598.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253107 (LOC100253107), mRNA","sp|Q9C5D6|CAAT9_ARATH","Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis thaliana GN=CAT9 PE=2 SV=1","COG0531","Amino acid transporters","K03294","vvi:100253107","basic amino acid/polyamine antiporter, APA family","GO:0016558//protein import into peroxisome matrix;GO:0003333//amino acid transmembrane transport;GO:0006635//fatty acid beta-oxidation","GO:0015326//cationic amino acid transmembrane transporter activity","GO:0016021//integral to membrane;GO:0005774//vacuolar membrane;GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[624,"CSE_Unigene14314","SW_Unigene6778","-","-","+(Mostly)",1056,{"v":0.987,"d":"98.70%"},11,2,9,{"v":1.27071,"d":"1.271"},{"v":0.935609,"d":"0.9356"},"gi|297734619|emb|CBI16670.3|","unnamed protein product [Vitis vinifera]","gi|359489297|ref|XM_002270877.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253028 (LOC100253028), mRNA","-","-","-","-","K10640","vvi:100253028","E3 ubiquitin-protein ligase RNF25 [EC:6.3.2.19]","GO:0048573//photoperiodism, flowering","GO:0046872//metal ion binding","GO:0005634//nucleus"]
[625,"CSE_Unigene13304","SW_CL6075_Contig1","-","-","+(Mostly)",903,{"v":0.987,"d":"98.70%"},12,7,5,{"v":0.221722,"d":"0.222"},{"v":0.0108867,"d":"0.0109"},"gi|296090185|emb|CBI40004.3|","unnamed protein product [Vitis vinifera]","gi|359489047|ref|XM_002271431.2|","PREDICTED: Vitis vinifera tRNA (guanine-N(7)-)-methyltransferase-like (LOC100266146), mRNA","sp|Q8GXB7|TRMB_ARATH","tRNA (guanine-N(7)-)-methyltransferase OS=Arabidopsis thaliana GN=At5g24840 PE=2 SV=1","COG0220","Predicted S-adenosylmethionine-dependent methyltransferase","K03439","vvi:100266146","tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]","GO:0006400//tRNA modification;GO:0036265//RNA (guanine-N7)-methylation","GO:0008176//tRNA (guanine-N7-)-methyltransferase activity","GO:0005634//nucleus"]
[626,"CSE_Unigene19514","SW_Unigene15635","-","-","+(Mostly)",1020,{"v":0.986,"d":"98.60%"},11,7,4,{"v":0.160947,"d":"0.161"},{"v":0.0036086,"d":"0.0036"},"gi|225436225|ref|XP_002273726.1|","PREDICTED: chromo domain protein LHP1 [Vitis vinifera] >gi|296090196|emb|CBI40015.3| unnamed protein product [Vitis vinifera]","gi|225436224|ref|XM_002273690.1|","PREDICTED: Vitis vinifera chromo domain protein LHP1-like (LOC100250685), mRNA","sp|Q946J8|LHP1_ARATH","Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana GN=LHP1 PE=1 SV=2","-","-","-","-","-","GO:0031047//gene silencing by RNA;GO:0048364//root development;GO:0010048//vernalization response;GO:0009825//multidimensional cell growth;GO:0009910//negative regulation of flower development;GO:0016569//covalent chromatin modification;GO:0010016//shoot system morphogenesis;GO:0048573//photoperiodism, flowering;GO:0006342//chromatin silencing;GO:0045857//negative regulation of molecular function, epigenetic","GO:0003677//DNA binding;GO:0035064//methylated histone residue binding","GO:0000791//euchromatin;GO:0005720//nuclear heterochromatin"]
[627,"CSE_CL6228_Contig1","SW_Unigene16050","-","-","+(Mostly)",942,{"v":0.985,"d":"98.50%"},14,{"v":9.83402,"d":"10"},{"v":4.16598,"d":"4"},{"v":0.108701,"d":"0.109"},{"v":6.2951e-05,"d":"0.0001"},"gi|359489060|ref|XP_002275929.2|","PREDICTED: uncharacterized deoxyribonuclease YabD-like [Vitis vinifera]","gi|359489059|ref|XM_002275893.2|","PREDICTED: Vitis vinifera uncharacterized LOC100267748 (LOC100267748), mRNA","-","-","COG0084","Mg-dependent DNase","K03424","vvi:100267748","TatD DNase family protein [EC:3.1.21.-]","-","GO:0016888//endodeoxyribonuclease activity, producing 5'-phosphomonoesters","GO:0005634//nucleus"]
[628,"CSE_Unigene14286","SW_Unigene15135","-","-","+(Mostly)",1083,{"v":0.979,"d":"97.90%"},23,14,9,{"v":0.276642,"d":"0.277"},{"v":0.00231856,"d":"0.0023"},"gi|359489602|ref|XP_002274480.2|","PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera] >gi|297745280|emb|CBI40360.3| unnamed protein product [Vitis vinifera]","gi|359489601|ref|XM_002274444.2|","PREDICTED: Vitis vinifera F-box/kelch-repeat protein SKIP4-like (LOC100253406), mRNA","sp|Q9M2C9|SKIP4_ARATH","F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana GN=SKIP4 PE=1 SV=1","-","-","-","-","-","GO:0009409//response to cold","-","-"]
[629,"CSE_Unigene18695","SW_Unigene13682","-","-","+(Mostly)",1989,{"v":0.995,"d":"99.50%"},10,8,2,{"v":0.0725384,"d":"0.073"},{"v":0.000194143,"d":"0.0002"},"gi|225454346|ref|XP_002278060.1|","PREDICTED: probable receptor-like protein kinase At5g24010-like [Vitis vinifera]","gi|123684773|emb|AM465224.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X172500.11, clone ENTAV 115","sp|Q9FLW0|Y5241_ARATH","Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1","-","-","K04733","ath:AT5G38990","interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]","-","GO:0016757//transferase activity, transferring glycosyl groups;GO:0016772//transferase activity, transferring phosphorus-containing groups","GO:0005576//extracellular region;GO:0005634//nucleus;GO:0005783//endoplasmic reticulum"]
[630,"CSE_Unigene14048","SW_Unigene8389","-","-","+(Mostly)",798,{"v":0.989,"d":"98.90%"},9,4,5,{"v":0.360045,"d":"0.360"},{"v":0.121618,"d":"0.1216"},"gi|225454373|ref|XP_002278820.1|","PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera] >gi|297745362|emb|CBI40442.3| unnamed protein product [Vitis vinifera]","gi|349731252|emb|FQ394374.1|","Vitis vinifera clone SS0AFA21YB15","sp|O04603|RK5_ARATH","50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=1 SV=1","COG0094","Ribosomal protein L5","K02931","vvi:100251632","large subunit ribosomal protein L5","GO:0006412//translation;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0019344//cysteine biosynthetic process","GO:0003735//structural constituent of ribosome","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0016020//membrane;GO:0022625//cytosolic large ribosomal subunit"]
[631,"CSE_Unigene15927","SW_Unigene14484","-","-","+(Mostly)",1077,{"v":0.991,"d":"99.10%"},10,5,5,{"v":0.358273,"d":"0.358"},{"v":0.0964792,"d":"0.0965"},"gi|225454375|ref|XP_002278854.1|","PREDICTED: diacylglycerol kinase-like [Vitis vinifera]","gi|359489674|ref|XM_002278818.2|","PREDICTED: Vitis vinifera diacylglycerol kinase-like (LOC100246487), mRNA","sp|Q9LRB0|LCBK1_ARATH","Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1","COG1597","Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase","K07029","vvi:100246487",null,"GO:0007205//protein kinase C-activating G-protein coupled receptor signaling pathway;GO:0009409//response to cold;GO:0006671//phytosphingosine metabolic process;GO:0016310//phosphorylation","GO:0017050//D-erythro-sphingosine kinase activity;GO:0004143//diacylglycerol kinase activity","GO:0009536//plastid;GO:0005739//mitochondrion"]
[632,"CSE_Unigene14153","SW_CL6779_Contig2","-","-","+(Mostly)",756,{"v":0.989,"d":"98.90%"},8,6,2,{"v":0.133577,"d":"0.134"},{"v":0.00912321,"d":"0.0091"},"gi|225470904|ref|XP_002263519.1|","PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera] >gi|297745470|emb|CBI40550.3| unnamed protein product [Vitis vinifera]","gi|359489737|ref|XM_002263483.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260453 (LOC100260453), mRNA","-","-","COG1963","Uncharacterized protein conserved in bacteria","K09775","pop:POPTR_568517","hypothetical protein","-","-","GO:0009536//plastid;GO:0005886//plasma membrane"]
[633,"CSE_Unigene15694","SW_Unigene19659","-","-","+(Mostly)",1947,{"v":0.986,"d":"98.60%"},28,12,16,{"v":0.444777,"d":"0.445"},{"v":0.0451368,"d":"0.0451"},"gi|359489576|ref|XP_002264071.2|","PREDICTED: uncharacterized protein LOC100250210 [Vitis vinifera]","gi|359489575|ref|XM_002264035.2|","PREDICTED: Vitis vinifera uncharacterized LOC100250210 (LOC100250210), mRNA","sp|Q9M358|UVSSA_ARATH","UV-stimulated scaffold protein A homolog OS=Arabidopsis thaliana GN=At3g61800 PE=3 SV=1","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[634,"CSE_Unigene18500","SW_CL6417_Contig1","-","-","+(Mostly)",1101,{"v":0.995,"d":"99.50%"},5,3,2,{"v":0.277892,"d":"0.278"},{"v":0.154238,"d":"0.1542"},"gi|225453710|ref|XP_002269433.1|","PREDICTED: cell division protein FtsY homolog, chloroplastic [Vitis vinifera] >gi|296089055|emb|CBI38758.3| unnamed protein product [Vitis vinifera]","gi|225453709|ref|XM_002269397.1|","PREDICTED: Vitis vinifera cell division protein FtsY homolog, chloroplastic-like (LOC100267692), mRNA","sp|O80842|CFTSY_ARATH","Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2","COG0552","Signal recognition particle GTPase","K03110","vvi:100267692","fused signal recognition particle receptor","GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0045038//protein import into chloroplast thylakoid membrane;GO:0051301//cell division;GO:0009772//photosynthetic electron transport in photosystem II;GO:0006364//rRNA processing;GO:0051607//defense response to virus;GO:0010027//thylakoid membrane organization;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0006614//SRP-dependent cotranslational protein targeting to membrane;GO:0042793//transcription from plastid promoter;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0035304//regulation of protein dephosphorylation;GO:0009902//chloroplast relocation;GO:0006184//GTP catabolic process;GO:0010207//photosystem II assembly;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0005525//GTP binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005515//protein binding","GO:0009534//chloroplast thylakoid;GO:0005786//signal recognition particle, endoplasmic reticulum targeting"]
[635,"CSE_Unigene20227","SW_Unigene22327","-","-","+(Mostly)",1791,{"v":0.989,"d":"98.90%"},19,16,3,{"v":0.0486138,"d":"0.049"},{"v":5.91587e-09,"d":"0.0000"},"gi|225453730|ref|XP_002272714.1|","PREDICTED: probable methyltransferase PMT13 [Vitis vinifera] >gi|296089064|emb|CBI38767.3| unnamed protein product [Vitis vinifera]","gi|225453729|ref|XM_002272678.1|","PREDICTED: Vitis vinifera probable methyltransferase PMT13-like (LOC100255820), mRNA","sp|Q93W95|PMTD_ARATH","Probable methyltransferase PMT13 OS=Arabidopsis thaliana GN=At4g00740 PE=1 SV=1","-","-","-","-","-","GO:0052546//cell wall pectin metabolic process;GO:0032259//methylation","GO:0008757//S-adenosylmethionine-dependent methyltransferase activity","GO:0005768//endosome;GO:0005794//Golgi apparatus;GO:0016021//integral to membrane;GO:0005802//trans-Golgi network"]
[636,"CSE_Unigene15422","SW_Unigene14344","-","-","+(Mostly)",1089,{"v":0.995,"d":"99.50%"},5,1,4,{"v":0.917296,"d":"0.917"},{"v":0.644431,"d":"0.6444"},"gi|359489404|ref|XP_002278613.2|","PREDICTED: ATPase ASNA1 homolog [Vitis vinifera]","gi|359489403|ref|XM_002278577.2|","PREDICTED: Vitis vinifera ATPase ASNA1 homolog-like (LOC100252297), mRNA","-","-","COG0003","Oxyanion-translocating ATPase","K01551","vvi:100252297","arsenite-transporting ATPase [EC:3.6.3.16]","GO:0006200//ATP catabolic process;GO:0071722//detoxification of arsenic-containing substance","GO:0015446//arsenite-transmembrane transporting ATPase activity;GO:0005524//ATP binding","-"]
[637,"CSE_CL4672_Contig2","SW_CL2426_Contig1","-","-","+(Mostly)",2061,{"v":0.988,"d":"98.80%"},22,10,12,{"v":0.292779,"d":"0.293"},{"v":0.00549548,"d":"0.0055"},"gi|225453885|ref|XP_002273159.1|","PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera] >gi|296089141|emb|CBI38844.3| unnamed protein product [Vitis vinifera]","gi|225453884|ref|XM_002273123.1|","PREDICTED: Vitis vinifera flap endonuclease GEN-like 1 (LOC100259113), mRNA","sp|Q9LPD2|GENL1_ARATH","Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana GN=GEN1 PE=2 SV=3","COG0258","5'-3' exonuclease (including N-terminal domain of PolI)","K15338","vvi:100259113","flap endonuclease GEN [EC:3.1.-.-]","GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006281//DNA repair","GO:0004519//endonuclease activity;GO:0043566//structure-specific DNA binding","GO:0005634//nucleus"]
[638,"CSE_Unigene1373","SW_Unigene18692","-","-","+(Mostly)",777,{"v":0.985,"d":"98.50%"},12,10,2,{"v":0.0659155,"d":"0.066"},{"v":3.84572e-05,"d":"0.0000"},"gi|359490241|ref|XP_002268933.2|","PREDICTED: GTPase Der-like [Vitis vinifera]","gi|359490240|ref|XM_002268897.2|","PREDICTED: Vitis vinifera GTPase Der-like (LOC100251571), mRNA","sp|Q9TLX6|MNME_CYACA","Probable tRNA modification GTPase mnmE OS=Cyanidium caldarium GN=mnmE PE=3 SV=1","COG1160","Predicted GTPases","K03977","olu:OSTLU_44322","GTP-binding protein","-","GO:0005525//GTP binding","GO:0005739//mitochondrion"]
[639,"CSE_Unigene18227","SW_Unigene23210","-","-","+(Mostly)",1692,{"v":0.993,"d":"99.30%"},12,6,6,{"v":0.33357,"d":"0.334"},{"v":0.0552642,"d":"0.0553"},"gi|225466135|ref|XP_002268388.1|","PREDICTED: nitric oxide synthase 1 [Vitis vinifera] >gi|296084222|emb|CBI24610.3| unnamed protein product [Vitis vinifera]","gi|359490212|ref|XM_002268352.2|","PREDICTED: Vitis vinifera nitric oxide synthase 1-like (LOC100265605), mRNA","sp|Q66GP9|NOA1_ARATH","NO-associated protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NOA1 PE=1 SV=1","COG1161","Predicted GTPases","K13427","vvi:100265605","nitric-oxide synthase, plant [EC:1.14.13.39]","GO:0006399//tRNA metabolic process;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0051246//regulation of protein metabolic process;GO:0009902//chloroplast relocation;GO:0009651//response to salt stress;GO:0006184//GTP catabolic process;GO:0016226//iron-sulfur cluster assembly;GO:0006809//nitric oxide biosynthetic process;GO:0010322//regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009965//leaf morphogenesis;GO:0006897//endocytosis;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0030154//cell differentiation;GO:0055114//oxidation-reduction process;GO:0010193//response to ozone;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0004517//nitric-oxide synthase activity;GO:0005525//GTP binding;GO:0003924//GTPase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[640,"CSE_CL6895_Contig2","SW_Unigene17584","-","-","+(Mostly)",1131,{"v":0.99,"d":"99.00%"},11,10,1,{"v":0.0344643,"d":"0.034"},{"v":1.07142e-05,"d":"0.0000"},"gi|225454573|ref|XP_002263525.1|","PREDICTED: alcohol dehydrogenase-like 6 isoform 1 [Vitis vinifera] >gi|297737206|emb|CBI26407.3| unnamed protein product [Vitis vinifera]","gi|359489890|ref|XM_002263489.2|","PREDICTED: Vitis vinifera alcohol dehydrogenase-like 6, transcript variant 1 (LOC100254635), mRNA","sp|Q8LEB2|ADHL6_ARATH","Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2","COG1062","Zn-dependent alcohol dehydrogenases, class III","K00001","vvi:100254635","alcohol dehydrogenase [EC:1.1.1.1]","GO:0009611//response to wounding;GO:0009805//coumarin biosynthetic process;GO:0055114//oxidation-reduction process","GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups;GO:0016491//oxidoreductase activity;GO:0008270//zinc ion binding;GO:0000166//nucleotide binding","GO:0005737//cytoplasm"]
[641,"CSE_Unigene18904","SW_CL2577_Contig2","-","-","+(Mostly)",630,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.2932,"d":"0.293"},{"v":0.351798,"d":"0.3518"},"gi|225454745|ref|XP_002273656.1|","PREDICTED: DNA replication complex GINS protein PSF2 [Vitis vinifera] >gi|297737295|emb|CBI26496.3| unnamed protein product [Vitis vinifera]","gi|359489876|ref|XM_002273620.2|","PREDICTED: Vitis vinifera DNA replication complex GINS protein PSF2-like (LOC100264816), mRNA","sp|Q9C7A8|PSF2_ARATH","DNA replication complex GINS protein PSF2 OS=Arabidopsis thaliana GN=GINS2 PE=2 SV=2","COG5093","Uncharacterized conserved protein","K10733","vvi:100264816","GINS complex subunit 2","GO:0006260//DNA replication","-","GO:0005634//nucleus"]
[642,"CSE_Unigene579","SW_Unigene14356","-","-","+(Mostly)",540,{"v":0.994,"d":"99.40%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225454777|ref|XP_002277013.1|","PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1 [Vitis vinifera] >gi|297737314|emb|CBI26515.3| unnamed protein product [Vitis vinifera]","gi|359489882|ref|XM_002276977.2|","PREDICTED: Vitis vinifera peptidyl-tRNA hydrolase 2, mitochondrial-like, transcript variant 1 (LOC100249515), mRNA","-","-","COG1990","Uncharacterized conserved protein","K04794","vvi:100249515","peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]","-","GO:0004045//aminoacyl-tRNA hydrolase activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005739//mitochondrion"]
[643,"CSE_Unigene17487","SW_Unigene22498","-","-","+(Mostly)",1548,{"v":0.987,"d":"98.70%"},20,6,14,{"v":0.866303,"d":"0.866"},{"v":0.799301,"d":"0.7993"},"gi|225462725|ref|XP_002268709.1|","PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera] >gi|302143685|emb|CBI22546.3| unnamed protein product [Vitis vinifera]","gi|225462724|ref|XM_002268673.1|","PREDICTED: Vitis vinifera RNA polymerase sigma factor rpoD-like (LOC100250120), mRNA","sp|Q9ZNX9|SIGE_ARATH","RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SIGE PE=1 SV=1","COG0568","DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)","K03093","vvi:100250120","RNA polymerase sigma factor","GO:0010218//response to far red light;GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0010114//response to red light;GO:0010207//photosystem II assembly;GO:0006352//DNA-dependent transcription, initiation;GO:0009658//chloroplast organization;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0071483//cellular response to blue light","GO:0003899//DNA-directed RNA polymerase activity;GO:0001053//plastid sigma factor activity;GO:0003677//DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[644,"CSE_Unigene13867","SW_Unigene7119","-","-","+(Mostly)",825,{"v":0.99,"d":"99.00%"},8,3,5,{"v":0.504818,"d":"0.505"},{"v":0.280126,"d":"0.2801"},"gi|225462701|ref|XP_002266963.1|","PREDICTED: plastid division protein PDV1-like [Vitis vinifera]","gi|359490583|ref|XM_002266927.2|","PREDICTED: Vitis vinifera plastid division protein PDV1-like (LOC100253508), mRNA","sp|Q9FK13|PDV1_ARATH","Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1","-","-","-","-","-","GO:0010020//chloroplast fission","-","GO:0009707//chloroplast outer membrane"]
[645,"CSE_Unigene16114","SW_Unigene16708","-","-","+(Mostly)",1788,{"v":0.996,"d":"99.60%"},8,8,"NA",{"v":0,"d":"0.000"},"NA","gi|225464655|ref|XP_002276766.1|","PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]","gi|123720541|emb|AM458094.1|","Vitis vinifera contig VV78X024267.14, whole genome shotgun sequence","sp|Q9FLX5|AB8G_ARATH","ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1","COG1131","ABC-type multidrug transport system, ATPase component","K12843","vvi:100248403","U4/U6 small nuclear ribonucleoprotein PRP3","GO:0006200//ATP catabolic process","GO:0042626//ATPase activity, coupled to transmembrane movement of substances;GO:0005524//ATP binding","GO:0016020//membrane"]
[646,"CSE_Unigene17304","SW_Unigene22072","-","-","+(Mostly)",954,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.121035,"d":"0.121"},{"v":0.056021,"d":"0.0560"},"gi|302143792|emb|CBI22653.3|","unnamed protein product [Vitis vinifera]","gi|123685124|emb|AM473931.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X020517.18, clone ENTAV 115","sp|Q84WV9|QPCT_ARATH","Glutaminyl-peptide cyclotransferase OS=Arabidopsis thaliana GN=QCT PE=1 SV=1","COG3823","Glutamine cyclotransferase","-","-","-","GO:0031348//negative regulation of defense response;GO:0017186//peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase;GO:0009723//response to ethylene stimulus","GO:0046872//metal ion binding;GO:0016603//glutaminyl-peptide cyclotransferase activity","GO:0005886//plasma membrane;GO:0009507//chloroplast"]
[647,"CSE_Unigene13696","SW_Unigene22168","-","-","+(Mostly)",831,{"v":0.994,"d":"99.40%"},5,2,3,{"v":0.452571,"d":"0.453"},{"v":0.32945,"d":"0.3295"},"gi|302143876|emb|CBI22737.3|","unnamed protein product [Vitis vinifera]","gi|359490423|ref|XM_002268476.2|","PREDICTED: Vitis vinifera uncharacterized LOC100242054 (LOC100242054), mRNA","sp|O65639|CSP1_ARATH","Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=2 SV=1","COG5082","Arginine methyltransferase-interacting protein, contains RING Zn-finger","K09250","ath:AT4G36020","cellular nucleic acid-binding protein","GO:0009560//embryo sac egg cell differentiation","GO:0003676//nucleic acid binding;GO:0046872//metal ion binding","GO:0005634//nucleus"]
[648,"CSE_Unigene18228","SW_Unigene16498","-","-","+(Mostly)",1905,{"v":0.991,"d":"99.10%"},18,9,9,{"v":0.339258,"d":"0.339"},{"v":0.0218628,"d":"0.0219"},"gi|225455364|ref|XP_002277372.1|","PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Vitis vinifera]","gi|225455363|ref|XM_002277336.1|","PREDICTED: Vitis vinifera soluble starch synthase, chloroplastic/amyloplastic-like (LOC100250417), mRNA","sp|Q9FNF2|SSY1_ARATH","Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS1 PE=2 SV=1","COG0297","Glycogen synthase","K00703","vvi:100250417","starch synthase [EC:2.4.1.21]","GO:0010021//amylopectin biosynthetic process;GO:0009250//glucan biosynthetic process;GO:0009863//salicylic acid mediated signaling pathway;GO:0009814//defense response, incompatible interaction","GO:0009011//starch synthase activity","GO:0009570//chloroplast stroma"]
[649,"CSE_Unigene15378","SW_CL1569_Contig3","-","-","+(Mostly)",651,{"v":0.992,"d":"99.20%"},5,4,1,{"v":0.0836358,"d":"0.084"},{"v":0.0150956,"d":"0.0151"},"gi|225455342|ref|XP_002276719.1|","PREDICTED: 50S ribosomal protein L9 [Vitis vinifera] >gi|302143920|emb|CBI23025.3| unnamed protein product [Vitis vinifera]","gi|359490708|ref|XM_002276683.2|","PREDICTED: Vitis vinifera 50S ribosomal protein L9-like (LOC100260703), mRNA","sp|Q8L803|RK9_WHEAT","50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1","COG0359","Ribosomal protein L9","K02939","pop:POPTR_677397","large subunit ribosomal protein L9","GO:0042254//ribosome biogenesis;GO:0006412//translation","GO:0003735//structural constituent of ribosome","GO:0005840//ribosome;GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[650,"CSE_Unigene16424","SW_Unigene14909","-","-","+(Mostly)",720,{"v":0.983,"d":"98.30%"},12,7,5,{"v":0.224364,"d":"0.224"},{"v":0.0116417,"d":"0.0116"},"gi|359490718|ref|XP_002275994.2|","PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis vinifera]","gi|359490717|ref|XM_002275958.2|","PREDICTED: Vitis vinifera thylakoid lumenal 17.4 kDa protein, chloroplastic-like (LOC100267488), mRNA","sp|P81760|TL17_ARATH","Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At5g53490 PE=1 SV=2","COG1357","Uncharacterized low-complexity proteins","-","-","-","GO:0016117//carotenoid biosynthetic process;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0030003//cellular cation homeostasis;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015979//photosynthesis;GO:0015995//chlorophyll biosynthetic process;GO:0070838//divalent metal ion transport;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0005515//protein binding","GO:0005576//extracellular region;GO:0009570//chloroplast stroma;GO:0009543//chloroplast thylakoid lumen;GO:0009535//chloroplast thylakoid membrane"]
[651,"CSE_Unigene1027","SW_Unigene12197","-","-","+(Mostly)",690,{"v":0.984,"d":"98.40%"},11,6,5,{"v":0.308894,"d":"0.309"},{"v":0.0507503,"d":"0.0508"},"gi|225455288|ref|XP_002274646.1|","PREDICTED: uncharacterized protein LOC100245212 [Vitis vinifera] >gi|302143949|emb|CBI23054.3| unnamed protein product [Vitis vinifera]","gi|359490725|ref|XM_002274610.2|","PREDICTED: Vitis vinifera uncharacterized LOC100245212 (LOC100245212), mRNA","sp|Q94A65|STR14_ARATH","Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1","COG0607","Rhodanese-related sulfurtransferase","-","-","-","-","-","GO:0009535//chloroplast thylakoid membrane"]
[652,"CSE_Unigene1637","SW_Unigene1818","-","-","+(Mostly)",1104,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.115245,"d":"0.115"},{"v":0.0507555,"d":"0.0508"},"gi|225455264|ref|XP_002273477.1|","PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic-like [Vitis vinifera]","gi|359490730|ref|XM_002273441.2|","PREDICTED: Vitis vinifera uncharacterized LOC100258867 (LOC100258867), mRNA","sp|Q56Y42|PLR1_ARATH","Pyridoxal reductase,chloroplastic OS=Arabidopsis thaliana GN=PLR1 PE=1 SV=1","COG0667","Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)","K05275","zma:100272747","pyridoxine 4-dehydrogenase [EC:1.1.1.65]","GO:0006098//pentose-phosphate shunt;GO:0043085//positive regulation of catalytic activity;GO:0019252//starch biosynthetic process;GO:0009443//pyridoxal 5'-phosphate salvage;GO:0000023//maltose metabolic process;GO:0019761//glucosinolate biosynthetic process;GO:0042821//pyridoxal biosynthetic process","GO:0047006//17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity;GO:0070402//NADPH binding;GO:0050236//pyridoxine:NADP 4-dehydrogenase activity","GO:0009507//chloroplast"]
[653,"CSE_Unigene13678","SW_CL8011_Contig1","-","-","+(Mostly)",699,{"v":0.986,"d":"98.60%"},10,6,4,{"v":0.237798,"d":"0.238"},{"v":0.0265273,"d":"0.0265"},"gi|225457446|ref|XP_002263177.1|","PREDICTED: nucleoside diphosphate kinase 2, chloroplastic isoform 1 [Vitis vinifera] >gi|297733614|emb|CBI14861.3| unnamed protein product [Vitis vinifera]","gi|359491055|ref|XM_002263141.2|","PREDICTED: Vitis vinifera nucleoside diphosphate kinase 2, chloroplastic-like, transcript variant 1 (LOC100242823), mRNA","sp|Q01402|NDK2_SPIOL","Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1","COG0105","Nucleoside diphosphate kinase","K00940","vvi:100242823","nucleoside-diphosphate kinase [EC:2.7.4.6]","GO:0006165//nucleoside diphosphate phosphorylation;GO:0006228//UTP biosynthetic process;GO:0006183//GTP biosynthetic process;GO:0006241//CTP biosynthetic process","GO:0004550//nucleoside diphosphate kinase activity;GO:0005524//ATP binding","-"]
[654,"CSE_Unigene14368","SW_Unigene7794","-","-","+(Mostly)",3057,{"v":0.992,"d":"99.20%"},25,7,18,{"v":0.819776,"d":"0.820"},{"v":0.640954,"d":"0.6410"},"gi|297733619|emb|CBI14866.3|","unnamed protein product [Vitis vinifera]","gi|359491155|ref|XM_002262886.2|","PREDICTED: Vitis vinifera telomere length regulation protein TEL2 homolog (LOC100256409), mRNA","sp|Q0DZT4|P2C19_ORYSJ","Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2","-","-","K11137","vvi:100256409","telomere length regulation protein","GO:0009793//embryo development ending in seed dormancy","-","GO:0005634//nucleus"]
[655,"CSE_Unigene13034","SW_Unigene2227","-","-","+(Mostly)",1059,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.309843,"d":"0.310"},{"v":0.236977,"d":"0.2370"},"gi|225456791|ref|XP_002277389.1|","PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis vinifera] >gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera]","gi|359491698|ref|XM_002277353.2|","PREDICTED: Vitis vinifera DNA-(apurinic or apyrimidinic site) lyase-like (LOC100258672), mRNA","sp|P45951|ARP_ARATH","Apurinic endonuclease-redox protein OS=Arabidopsis thaliana GN=ARP PE=2 SV=2","COG0708","Exonuclease III","K01142","aly:ARALYDRAFT_483223","exodeoxyribonuclease III [EC:3.1.11.2]","GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006281//DNA repair","GO:0004518//nuclease activity;GO:0016829//lyase activity","GO:0009507//chloroplast;GO:0005634//nucleus"]
[656,"CSE_Unigene20130","SW_Unigene8567","-","-","+(Mostly)",3234,{"v":0.992,"d":"99.20%"},20,4,16,{"v":1.46677,"d":"1.467"},{"v":0.61591,"d":"0.6159"},"gi|359491239|ref|XP_003634247.1|","PREDICTED: uncharacterized protein LOC100853506 [Vitis vinifera]","gi|359491238|ref|XM_003634199.1|","PREDICTED: Vitis vinifera uncharacterized LOC100853506 (LOC100853506), mRNA","-","-","-","-","-","-","-","-","-","-"]
[657,"CSE_CL4510_Contig2","SW_CL2966_Contig1","-","-","+(Mostly)",549,{"v":0.993,"d":"99.30%"},4,2,2,{"v":0.370653,"d":"0.371"},{"v":0.293125,"d":"0.2931"},"gi|225457085|ref|XP_002280078.1|","PREDICTED: ribonuclease 3 [Vitis vinifera] >gi|297733813|emb|CBI15060.3| unnamed protein product [Vitis vinifera]","gi|225457084|ref|XM_002280042.1|","PREDICTED: Vitis vinifera nuclear fusion defective 2 protein / ribonuclease III (NFD2), mRNA","-","-","COG0571","dsRNA-specific ribonuclease","-","-","-","GO:0006833//water transport;GO:0009651//response to salt stress;GO:0006333//chromatin assembly or disassembly;GO:0051607//defense response to virus;GO:0006972//hyperosmotic response;GO:0007030//Golgi organization;GO:0006096//glycolysis;GO:0046686//response to cadmium ion;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0009266//response to temperature stimulus;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0016075//rRNA catabolic process","GO:0004525//ribonuclease III activity;GO:0003677//DNA binding;GO:0003723//RNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity;GO:0003682//chromatin binding;GO:0030527//structural constituent of chromatin","GO:0000785//chromatin;GO:0005773//vacuole;GO:0009507//chloroplast;GO:0005634//nucleus"]
[658,"CSE_Unigene247","SW_Unigene22553","-","-","+(Mostly)",426,{"v":0.995,"d":"99.50%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|297733871|emb|CBI15118.3|","unnamed protein product [Vitis vinifera]","gi|147800271|emb|AM484038.2|","Vitis vinifera contig VV78X114980.4, whole genome shotgun sequence","sp|Q9SIK7|PSNB_ARATH","Presenilin-like protein At2g29900 OS=Arabidopsis thaliana GN=At2g29900 PE=2 SV=1","-","-","K04505","vvi:100262038","presenilin 1 [EC:3.4.23.-]","GO:0035556//intracellular signal transduction;GO:0019375//galactolipid biosynthetic process;GO:0051262//protein tetramerization;GO:0045892//negative regulation of transcription, DNA-dependent;GO:0016036//cellular response to phosphate starvation","GO:0004427//inorganic diphosphatase activity;GO:0004190//aspartic-type endopeptidase activity","GO:0005634//nucleus;GO:0005887//integral to plasma membrane"]
[659,"CSE_Unigene16881","SW_Unigene5363","-","-","+(Mostly)",1956,{"v":0.987,"d":"98.70%"},22,9,13,{"v":0.375794,"d":"0.376"},{"v":0.0252603,"d":"0.0253"},"gi|359491637|ref|XP_002280859.2|","PREDICTED: histone deacetylase 5-like [Vitis vinifera] >gi|297733877|emb|CBI15124.3| unnamed protein product [Vitis vinifera]","gi|359491636|ref|XM_002280823.2|","PREDICTED: Vitis vinifera histone deacetylase 5-like (LOC100250074), mRNA","sp|Q8RX28|HDA5_ARATH","Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1","COG0123","Deacetylases, including yeast histone deacetylase and acetoin utilization protein","K11407","vvi:100250074","histone deacetylase 6/10 [EC:3.5.1.98]","GO:0016558//protein import into peroxisome matrix;GO:0016575//histone deacetylation;GO:0006635//fatty acid beta-oxidation;GO:0045604//regulation of epidermal cell differentiation;GO:0006487//protein N-linked glycosylation","GO:0004407//histone deacetylase activity","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[660,"CSE_Unigene11862","SW_Unigene22138","-","-","+(Mostly)",783,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|359491667|ref|XP_003634300.1|","PREDICTED: LRR repeats and ubiquitin-like domain-containing protein At2g30105-like [Vitis vinifera] >gi|297733905|emb|CBI15152.3| unnamed protein product [Vitis vinifera]","gi|349711088|emb|FQ391045.1|","Vitis vinifera clone SS0AEB15YN15","sp|P0C895|Y2010_ARATH","LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana GN=At2g30105 PE=1 SV=1","COG4886","Leucine-rich repeat (LRR) protein","K13420","aly:ARALYDRAFT_356368","LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]","-","-","GO:0005886//plasma membrane"]
[661,"CSE_Unigene13026","SW_Unigene14903","-","-","+(Mostly)",1494,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.151585,"d":"0.152"},{"v":0.0293836,"d":"0.0294"},"gi|359491711|ref|XP_002284930.2|","PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1 [Vitis vinifera]","gi|359491710|ref|XM_002284894.2|","PREDICTED: Vitis vinifera xylogalacturonan beta-1,3-xylosyltransferase-like, transcript variant 1 (LOC100244988), mRNA","sp|Q3EAR7|GLYT2_ARATH","Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2","-","-","-","-","-","-","GO:0003824//catalytic activity","GO:0005794//Golgi apparatus;GO:0016020//membrane"]
[662,"CSE_Unigene13008","SW_Unigene19095","-","-","+(Mostly)",2430,{"v":0.991,"d":"99.10%"},21,10,11,{"v":0.451907,"d":"0.452"},{"v":0.0875939,"d":"0.0876"},"gi|147810884|emb|CAN67279.1|","hypothetical protein VITISV_022021 [Vitis vinifera]","gi|225456726|ref|XM_002268186.1|","PREDICTED: Vitis vinifera RINT1-like protein-like (LOC100263828), mRNA","-","-","-","-","-","-","-","GO:0006623//protein targeting to vacuole;GO:0006888//ER to Golgi vesicle-mediated transport","-","GO:0009507//chloroplast;GO:0005829//cytosol;GO:0042406//extrinsic to endoplasmic reticulum membrane"]
[663,"CSE_Unigene17410","SW_Unigene21793","-","-","+(Mostly)",1653,{"v":0.996,"d":"99.60%"},7,4,3,{"v":0.226901,"d":"0.227"},{"v":0.0556527,"d":"0.0557"},"gi|225456697|ref|XP_002273569.1|","PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Vitis vinifera]","gi|225456696|ref|XM_002273533.1|","PREDICTED: Vitis vinifera delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like (LOC100251938), mRNA","sp|Q40255|ALDH_LINUS","Probable aldehyde dehydrogenase OS=Linum usitatissimum GN=FIS1 PE=2 SV=1","COG1012","NAD-dependent aldehyde dehydrogenases","K00294","vvi:100251938","1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]","GO:0055114//oxidation-reduction process;GO:0009651//response to salt stress;GO:0072593//reactive oxygen species metabolic process;GO:0010133//proline catabolic process to glutamate","GO:0008270//zinc ion binding;GO:0050897//cobalt ion binding;GO:0004028//3-chloroallyl aldehyde dehydrogenase activity;GO:0003842//1-pyrroline-5-carboxylate dehydrogenase activity;GO:0004029//aldehyde dehydrogenase (NAD) activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[664,"CSE_Unigene2033","SW_Unigene12803","-","-","+(Mostly)",2628,{"v":0.994,"d":"99.40%"},17,13,4,{"v":0.108792,"d":"0.109"},{"v":2.16044e-05,"d":"0.0000"},"gi|225456631|ref|XP_002266698.1|","PREDICTED: pentatricopeptide repeat-containing protein At1g74750 [Vitis vinifera]","gi|123714052|emb|AM432127.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X012423.11, clone ENTAV 115","sp|Q8GYP6|PPR49_ARATH","Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[665,"CSE_Unigene16397","SW_Unigene17085","-","-","+(Mostly)",1488,{"v":0.997,"d":"99.70%"},5,4,1,{"v":0.0773191,"d":"0.077"},{"v":0.012052,"d":"0.0121"},"gi|297734081|emb|CBI15328.3|","unnamed protein product [Vitis vinifera]","gi|147770797|emb|AM446906.2|","Vitis vinifera contig VV78X112185.9, whole genome shotgun sequence","sp|Q9FME4|PP438_ARATH","Pentatricopeptide repeat-containing protein At5g60960, mitochondrial OS=Arabidopsis thaliana GN=At5g60960 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0009640//photomorphogenesis;GO:0009220//pyrimidine ribonucleotide biosynthetic process;GO:0010388//cullin deneddylation","GO:0003723//RNA binding","GO:0005739//mitochondrion;GO:0005634//nucleus"]
[666,"CSE_Unigene8804","SW_CL1706_Contig1","-","-","+(Mostly)",924,{"v":0.989,"d":"98.90%"},10,8,2,{"v":0.0842689,"d":"0.084"},{"v":0.000460064,"d":"0.0005"},"gi|225456538|ref|XP_002264965.1|","PREDICTED: ADP,ATP carrier protein ER-ANT1 [Vitis vinifera] >gi|297734094|emb|CBI15341.3| unnamed protein product [Vitis vinifera]","gi|225456537|ref|XM_002264929.1|","PREDICTED: Vitis vinifera ADP,ATP carrier protein ER-ANT1-like (LOC100263960), mRNA","sp|Q8LB08|ADT4_ARATH","ADP,ATP carrier protein ER-ANT1 OS=Arabidopsis thaliana GN=ER-ANT1 PE=2 SV=2","-","-","K05863","vvi:100263960","solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31","GO:0055085//transmembrane transport;GO:0048316//seed development;GO:0048364//root development;GO:0048367//shoot system development;GO:0051503//adenine nucleotide transport","GO:0005471//ATP:ADP antiporter activity","GO:0016021//integral to membrane;GO:0005743//mitochondrial inner membrane;GO:0005789//endoplasmic reticulum membrane"]
[667,"CSE_Unigene15193","SW_Unigene8354","-","-","+(Mostly)",954,{"v":0.993,"d":"99.30%"},7,5,2,{"v":0.157982,"d":"0.158"},{"v":0.0225484,"d":"0.0225"},"gi|225455706|ref|XP_002266571.1|","PREDICTED: isoaspartyl peptidase/L-asparaginase 1 [Vitis vinifera] >gi|297734101|emb|CBI15348.3| unnamed protein product [Vitis vinifera]","gi|359490897|ref|XM_002266535.2|","PREDICTED: Vitis vinifera isoaspartyl peptidase/L-asparaginase 1-like (LOC100250923), mRNA","sp|Q9ZSD6|ASPG_LUPLU","Isoaspartyl peptidase/L-asparaginase OS=Lupinus luteus PE=1 SV=1","COG1446","Asparaginase","K13051","vvi:100250923","beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]","GO:0033345//asparagine catabolic process via L-aspartate;GO:0006516//glycoprotein catabolic process;GO:0051604//protein maturation","GO:0004067//asparaginase activity","GO:0005829//cytosol"]
[668,"CSE_Unigene14658","SW_Unigene22007","-","-","+(Mostly)",471,{"v":0.987,"d":"98.70%"},6,3,3,{"v":0.35938,"d":"0.359"},{"v":0.194311,"d":"0.1943"},"gi|225455760|ref|XP_002269703.1|","PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Vitis vinifera] >gi|147867156|emb|CAN80504.1| hypothetical protein VITISV_035185 [Vitis vinifera] >gi|297734127|emb|CBI15374.3| unnamed protein product [Vitis vinifera]","gi|359490908|ref|XM_002269667.2|","PREDICTED: Vitis vinifera H/ACA ribonucleoprotein complex subunit 2-like protein (LOC100266210), mRNA","sp|Q9LEY9|NHP2_ARATH","H/ACA ribonucleoprotein complex subunit 2-like protein OS=Arabidopsis thaliana GN=At5g08180 PE=1 SV=1","COG1358","Ribosomal protein HS6-type (S12/L30/L7a)","K11129","vvi:100266210","H/ACA ribonucleoprotein complex subunit 2","-","GO:0003723//RNA binding","GO:0005730//nucleolus;GO:0030529//ribonucleoprotein complex"]
[669,"CSE_Unigene17937","SW_Unigene14690","-","-","+(Mostly)",843,{"v":0.986,"d":"98.60%"},6,2,4,{"v":0.734316,"d":"0.734"},{"v":0.51043,"d":"0.5104"},"gi|297734155|emb|CBI15402.3|","unnamed protein product [Vitis vinifera]","gi|225455829|ref|XM_002272965.1|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase B-like (LOC100254249), mRNA","sp|Q8LDP4|CP19D_ARATH","Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2","-","-","K03768","ppp:PHYPADRAFT_142762","peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]","GO:0016556//mRNA modification;GO:0044267//cellular protein metabolic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","GO:0016853//isomerase activity","GO:0009507//chloroplast"]
[670,"CSE_CL931_Contig1","SW_CL2215_Contig1","-","-","+(Mostly)",1230,{"v":0.989,"d":"98.90%"},13,5,8,{"v":0.533041,"d":"0.533"},{"v":0.308877,"d":"0.3089"},"gi|359491033|ref|XP_002278671.2|","PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis vinifera] >gi|297734333|emb|CBI15580.3| unnamed protein product [Vitis vinifera]","gi|359491032|ref|XM_002278635.2|","PREDICTED: Vitis vinifera zinc finger protein VAR3, chloroplastic-like (LOC100268018), mRNA","sp|Q8S9K3|VAR3_ARATH","Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana GN=VAR3 PE=1 SV=2","-","-","K02350","rcu:RCOM_1431670","DNA polymerase zeta subunit [EC:2.7.7.7]","-","GO:0008270//zinc ion binding","GO:0005622//intracellular"]
[671,"CSE_Unigene16151","SW_Unigene12678","-","-","+(Mostly)",1155,{"v":0.99,"d":"99.00%"},11,4,7,{"v":0.667435,"d":"0.667"},{"v":0.480967,"d":"0.4810"},"gi|225456185|ref|XP_002282720.1|","PREDICTED: TPR repeat-containing thioredoxin TDX-like [Vitis vinifera]","gi|225456184|ref|XM_002282684.1|","PREDICTED: Vitis vinifera TPR repeat-containing thioredoxin TDX-like (LOC100268081), mRNA","sp|Q8VWG7|TDX_ARATH","TPR repeat-containing thioredoxin TDX OS=Arabidopsis thaliana GN=TDX PE=1 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","K09560","gmx:100785914","suppressor of tumorigenicity protein 13","GO:0006457//protein folding;GO:0045454//cell redox homeostasis;GO:0010286//heat acclimation;GO:0051259//protein oligomerization","GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor;GO:0030544//Hsp70 protein binding","GO:0005737//cytoplasm"]
[672,"CSE_Unigene17786","SW_Unigene16100","-","-","+(Mostly)",1452,{"v":0.994,"d":"99.40%"},9,6,3,{"v":0.162291,"d":"0.162"},{"v":0.0091503,"d":"0.0092"},"gi|225456266|ref|XP_002283475.1|","PREDICTED: aspartyl aminopeptidase [Vitis vinifera] >gi|297734385|emb|CBI15632.3| unnamed protein product [Vitis vinifera]","gi|225456265|ref|XM_002283439.1|","PREDICTED: Vitis vinifera aspartyl aminopeptidase-like (LOC100249091), mRNA","sp|B9RAJ0|DNPEP_RICCO","Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2","COG1362","Aspartyl aminopeptidase","K01267","vvi:100249091","aspartyl aminopeptidase [EC:3.4.11.21]","GO:0010413//glucuronoxylan metabolic process;GO:0016558//protein import into peroxisome matrix;GO:0006508//proteolysis;GO:0006635//fatty acid beta-oxidation;GO:0045492//xylan biosynthetic process;GO:0046686//response to cadmium ion","GO:0008270//zinc ion binding;GO:0004177//aminopeptidase activity;GO:0008237//metallopeptidase activity","GO:0005829//cytosol;GO:0005774//vacuolar membrane;GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[673,"CSE_Unigene14479","SW_Unigene4612","-","-","+(Mostly)",567,{"v":0.989,"d":"98.90%"},6,4,2,{"v":0.162266,"d":"0.162"},{"v":0.0356207,"d":"0.0356"},"gi|225456327|ref|XP_002283817.1|","PREDICTED: deoxycytidylate deaminase [Vitis vinifera] >gi|297734422|emb|CBI15669.3| unnamed protein product [Vitis vinifera]","gi|359491084|ref|XM_002283781.2|","PREDICTED: Vitis vinifera deoxycytidylate deaminase-like (LOC100261131), mRNA","-","-","COG2131","Deoxycytidylate deaminase","K01493","vvi:100261131","dCMP deaminase [EC:3.5.4.12]","GO:0008152//metabolic process","GO:0004132//dCMP deaminase activity;GO:0008270//zinc ion binding","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0009507//chloroplast"]
[674,"CSE_Unigene18942","SW_Unigene22004","-","-","+(Mostly)",978,{"v":0.995,"d":"99.50%"},5,4,1,{"v":0.087139,"d":"0.087"},{"v":0.0168531,"d":"0.0169"},"gi|225456483|ref|XP_002280872.1|","PREDICTED: magnesium-protoporphyrin O-methyltransferase [Vitis vinifera]","gi|359491138|ref|XM_002280836.2|","PREDICTED: Vitis vinifera magnesium-protoporphyrin O-methyltransferase-like (LOC100243913), mRNA","sp|Q9LU92|TGT4_ARATH","Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4 PE=2 SV=1","COG2227","2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase","K03428","vvi:100243913","magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]","GO:0046777//protein autophosphorylation;GO:0006364//rRNA processing;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0015995//chlorophyll biosynthetic process;GO:0032259//methylation;GO:0010155//regulation of proton transport;GO:0015979//photosynthesis","GO:0046406//magnesium protoporphyrin IX methyltransferase activity","GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane"]
[675,"CSE_Unigene15813","SW_Unigene6615","-","-","+(Mostly)",1530,{"v":0.995,"d":"99.50%"},7,7,"NA",{"v":0,"d":"0.000"},"NA","gi|225456491|ref|XP_002280902.1|","PREDICTED: uncharacterized WD repeat-containing protein alr3466 [Vitis vinifera] >gi|297734510|emb|CBI15757.3| unnamed protein product [Vitis vinifera]","gi|359491582|ref|XM_002280866.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255948 (LOC100255948), mRNA","-","-","-","-","K12857","ath:AT2G43770","Prp8 binding protein","-","-","GO:0005737//cytoplasm"]
[676,"CSE_Unigene10804","SW_Unigene3851","-","-","+(Mostly)",726,{"v":0.997,"d":"99.70%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225459870|ref|XP_002285933.1|","PREDICTED: dolichol-phosphate mannosyltransferase [Vitis vinifera] >gi|302141662|emb|CBI18865.3| unnamed protein product [Vitis vinifera]","gi|359492873|ref|XM_002285897.2|","PREDICTED: Vitis vinifera dolichol-phosphate mannosyltransferase-like (LOC100242020), mRNA","-","-","COG0463","Glycosyltransferases involved in cell wall biogenesis","K00721","vvi:100242020","dolichol-phosphate mannosyltransferase [EC:2.4.1.83]","GO:0030244//cellulose biosynthetic process;GO:0006486//protein glycosylation;GO:0048193//Golgi vesicle transport;GO:0060359//response to ammonium ion","GO:0004686//elongation factor-2 kinase activity;GO:0004582//dolichyl-phosphate beta-D-mannosyltransferase activity","GO:0033185//dolichol-phosphate-mannose synthase complex;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[677,"CSE_Unigene11003","SW_CL6367_Contig1","-","-","+(Mostly)",627,{"v":0.983,"d":"98.30%"},5,4,1,{"v":0.0879373,"d":"0.088"},{"v":0.0172865,"d":"0.0173"},"gi|225459770|ref|XP_002285905.1|","PREDICTED: uncharacterized protein LOC100243759 [Vitis vinifera] >gi|302141706|emb|CBI18909.3| unnamed protein product [Vitis vinifera]","gi|349730863|emb|FQ394185.1|","Vitis vinifera clone SS0AFA22YC24","-","-","-","-","-","-","-","-","GO:0008270//zinc ion binding","GO:0009507//chloroplast"]
[678,"CSE_Unigene13573","SW_Unigene3998","-","-","+(Mostly)",792,{"v":0.994,"d":"99.40%"},5,3,2,{"v":0.228021,"d":"0.228"},{"v":0.108553,"d":"0.1086"},"gi|225459685|ref|XP_002285888.1|","PREDICTED: BTB/POZ domain-containing protein At4g08455-like [Vitis vinifera]","gi|349709206|emb|FQ378616.1|","Vitis vinifera clone SS0AEB13YA15","sp|Q6DBN1|Y4845_ARATH","BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana GN=At4g08455 PE=1 SV=1","-","-","K10523","sbi:SORBI_07g007740","speckle-type POZ protein","-","GO:0005515//protein binding","GO:0005737//cytoplasm"]
[679,"CSE_Unigene15154","SW_Unigene8716","-","-","+(Mostly)",1446,{"v":0.993,"d":"99.30%"},10,7,3,{"v":0.171195,"d":"0.171"},{"v":0.00800258,"d":"0.0080"},"gi|359492536|ref|XP_002284503.2|","PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Vitis vinifera]","gi|359492535|ref|XM_002284467.2|","PREDICTED: Vitis vinifera IAA-amino acid hydrolase ILR1-like 6-like (LOC100264396), mRNA","sp|Q8VYX0|ILL6_ARATH","IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2","COG1473","Metal-dependent amidase/aminoacylase/carboxypeptidase","K14664","vvi:100264396","IAA-amino acid hydrolase [EC:3.5.1.-]","GO:0010112//regulation of systemic acquired resistance;GO:0009753//response to jasmonic acid stimulus;GO:0009620//response to fungus;GO:0009850//auxin metabolic process;GO:0009611//response to wounding;GO:0009695//jasmonic acid biosynthetic process;GO:0006508//proteolysis","GO:0047980//hippurate hydrolase activity;GO:0008237//metallopeptidase activity;GO:0010178//IAA-amino acid conjugate hydrolase activity","GO:0005576//extracellular region"]
[680,"CSE_Unigene8395","SW_Unigene4368","-","-","+(Mostly)",1209,{"v":0.993,"d":"99.30%"},8,7,1,{"v":0.0581179,"d":"0.058"},{"v":0.00100288,"d":"0.0010"},"gi|302141811|emb|CBI19014.3|","unnamed protein product [Vitis vinifera]","gi|225459566|ref|XM_002285823.1|","PREDICTED: Vitis vinifera uncharacterized LOC100267707 (LOC100267707), mRNA","-","-","-","-","-","-","-","-","-","GO:0016021//integral to membrane;GO:0005739//mitochondrion"]
[681,"CSE_Unigene13669","SW_Unigene22078","-","-","+(Mostly)",810,{"v":0.989,"d":"98.90%"},9,5,4,{"v":0.33937,"d":"0.339"},{"v":0.0973201,"d":"0.0973"},"gi|225459564|ref|XP_002285857.1|","PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis vinifera] >gi|302141814|emb|CBI19017.3| unnamed protein product [Vitis vinifera]","gi|359492593|ref|XM_002285821.2|","PREDICTED: Vitis vinifera photosystem II 22 kDa protein, chloroplastic-like (LOC100245393), mRNA","sp|Q9SMB4|PSBS_TOBAC","Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum GN=PSBS PE=2 SV=1","-","-","K03542","vvi:100245393","photosystem II 22kDa protein","GO:0010196//nonphotochemical quenching;GO:0080167//response to karrikin","-","GO:0009535//chloroplast thylakoid membrane"]
[682,"CSE_Unigene13699","SW_CL8358_Contig1","-","-","+(Mostly)",567,{"v":0.974,"d":"97.40%"},3,2,1,{"v":0.167289,"d":"0.167"},{"v":0.14242,"d":"0.1424"},"gi|225459528|ref|XP_002285846.1|","PREDICTED: cation transport regulator-like protein 2 [Vitis vinifera] >gi|302141833|emb|CBI19036.3| unnamed protein product [Vitis vinifera]","gi|225459527|ref|XM_002285810.1|","PREDICTED: Vitis vinifera cation transport regulator-like protein 2 (LOC100264430), mRNA","-","-","COG3703","Uncharacterized protein involved in cation transport","K07232","ath:AT1G44790","cation transport protein ChaC","-","-","GO:0005829//cytosol"]
[683,"CSE_CL2253_Contig2","SW_CL1219_Contig1","-","-","+(Mostly)",501,{"v":0.99,"d":"99.00%"},5,4,1,{"v":0.0894582,"d":"0.089"},{"v":0.0182355,"d":"0.0182"},"gi|225459459|ref|XP_002285833.1|","PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis vinifera] >gi|302141873|emb|CBI19076.3| unnamed protein product [Vitis vinifera]","gi|225459458|ref|XM_002285797.1|","PREDICTED: Vitis vinifera 30S ribosomal protein S13, chloroplastic-like (LOC100254016), mRNA","sp|P42732|RR13_ARATH","30S ribosomal protein S13, chloroplastic OS=Arabidopsis thaliana GN=RPS13 PE=2 SV=1","COG0099","Ribosomal protein S13","K02952","vvi:100254016","small subunit ribosomal protein S13","GO:0006412//translation;GO:0009773//photosynthetic electron transport in photosystem I;GO:0006354//DNA-dependent transcription, elongation;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0042254//ribosome biogenesis;GO:0035304//regulation of protein dephosphorylation","GO:0003723//RNA binding;GO:0003735//structural constituent of ribosome","GO:0005739//mitochondrion;GO:0015935//small ribosomal subunit;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[684,"CSE_Unigene17382","SW_Unigene13935","-","-","+(Mostly)",900,{"v":0.998,"d":"99.80%"},2,1,1,{"v":0.313885,"d":"0.314"},{"v":0.364433,"d":"0.3644"},"gi|359492838|ref|XP_002284219.2|","PREDICTED: random slug protein 5 [Vitis vinifera] >gi|302141931|emb|CBI19134.3| unnamed protein product [Vitis vinifera]","gi|359492837|ref|XM_002284183.2|","PREDICTED: Vitis vinifera random slug protein 5-like (LOC100250501), mRNA","sp|Q94C59|PATL4_ARATH","Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2","-","-","-","-","-","GO:0031348//negative regulation of defense response;GO:0006810//transport;GO:0042546//cell wall biogenesis","GO:0005215//transporter activity","GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[685,"CSE_Unigene13451","SW_Unigene23621","-","-","+(Mostly)",1218,{"v":0.984,"d":"98.40%"},19,10,9,{"v":0.392388,"d":"0.392"},{"v":0.0441444,"d":"0.0441"},"gi|225459282|ref|XP_002285785.1|","PREDICTED: uncharacterized protein LOC100257435 isoform 1 [Vitis vinifera] >gi|359492865|ref|XP_003634475.1| PREDICTED: uncharacterized protein LOC100257435 isoform 2 [Vitis vinifera]","gi|359492864|ref|XM_003634427.1|","PREDICTED: Vitis vinifera uncharacterized LOC100257435, transcript variant 2 (LOC100257435), mRNA","sp|Q9SN46|LRX5_ARATH","Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana GN=LRX5 PE=2 SV=2","-","-","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0015824//proline transport;GO:0006979//response to oxidative stress","-","GO:0009507//chloroplast"]
[686,"CSE_Unigene17723","SW_Unigene22231","-","-","+(Mostly)",1155,{"v":0.998,"d":"99.80%"},2,"NA",2,"NA","NA","gi|359492453|ref|XP_002284086.2|","PREDICTED: serine/threonine-protein phosphatase 2A activator-like [Vitis vinifera]","gi|359492452|ref|XM_002284050.2|","PREDICTED: Vitis vinifera serine/threonine-protein phosphatase 2A activator-like (LOC100259247), mRNA","-","-","COG5057","Phosphotyrosyl phosphatase activator","-","-","-","-","GO:0019211//phosphatase activator activity;GO:0016853//isomerase activity","GO:0005737//cytoplasm"]
[687,"CSE_Unigene18181","SW_Unigene22253","-","-","+(Mostly)",2919,{"v":0.993,"d":"99.30%"},21,5,16,{"v":0.937315,"d":"0.937"},{"v":0.795281,"d":"0.7953"},"gi|302141987|emb|CBI19190.3|","unnamed protein product [Vitis vinifera]","gi|359492456|ref|XM_002284045.2|","PREDICTED: Vitis vinifera F-box protein At1g78280-like (LOC100242134), mRNA","sp|Q9M9E8|FB92_ARATH","F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3","-","-","K11323","cre:CHLREDRAFT_120259","histone arginine demethylase JMJD6 [EC:1.14.11.-]","GO:0052542//defense response by callose deposition;GO:0006355//regulation of transcription, DNA-dependent;GO:0010200//response to chitin;GO:0007166//cell surface receptor signaling pathway","GO:0016772//transferase activity, transferring phosphorus-containing groups;GO:0016757//transferase activity, transferring glycosyl groups","GO:0005829//cytosol;GO:0005634//nucleus"]
[688,"CSE_Unigene9970","SW_Unigene23500","-","-","+(Mostly)",1380,{"v":0.993,"d":"99.30%"},10,3,7,{"v":0.621265,"d":"0.621"},{"v":0.355097,"d":"0.3551"},"gi|302142020|emb|CBI19223.3|","unnamed protein product [Vitis vinifera]","gi|225459165|ref|XM_002283927.1|","PREDICTED: Vitis vinifera chaperone protein dnaJ 1, mitochondrial-like (LOC100259253), mRNA","sp|Q38813|DNAJ1_ARATH","Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K03686","vvi:100259686","molecular chaperone DnaJ","GO:0006457//protein folding","GO:0046872//metal ion binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding;GO:1901363;GO:0097159//organic cyclic compound binding","GO:0005739//mitochondrion"]
[689,"CSE_Unigene17126","SW_Unigene22477","-","-","+(Mostly)",1161,{"v":0.988,"d":"98.80%"},14,8,6,{"v":0.277918,"d":"0.278"},{"v":0.00400376,"d":"0.0040"},"gi|225459162|ref|XP_002285714.1|","PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [Vitis vinifera] >gi|302142022|emb|CBI19225.3| unnamed protein product [Vitis vinifera]","gi|359492909|ref|XM_002285678.2|","PREDICTED: Vitis vinifera phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like (LOC100250537), mRNA","sp|P38025|PUR7_ARATH","Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic OS=Arabidopsis thaliana GN=PUR7 PE=2 SV=2","COG0152","Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase","K01923","vvi:100250537","phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]","GO:0009733//response to auxin stimulus;GO:0009407//toxin catabolic process;GO:0006189//'de novo' IMP biosynthetic process","GO:0004639//phosphoribosylaminoimidazolesuccinocarboxamide synthase activity;GO:0005524//ATP binding","GO:0009570//chloroplast stroma"]
[690,"CSE_Unigene12795","SW_Unigene13739","-","-","+(Mostly)",1515,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.202401,"d":"0.202"},{"v":0.0614312,"d":"0.0614"},"gi|310877780|gb|ADP37121.1|","sucrose transporter [Vitis vinifera]","gi|359492992|ref|XM_002285532.2|","PREDICTED: Vitis vinifera sucrose transporter-like (VVSUC11), mRNA","sp|Q9FE59|SUC4_ARATH","Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2","COG0477","Permeases of the major facilitator superfamily","K15378","vvi:100232844","solute carrier family 45, member 1/2/4","GO:0055085//transmembrane transport;GO:0015770//sucrose transport","GO:0008515//sucrose transmembrane transporter activity","GO:0005887//integral to plasma membrane;GO:0005773//vacuole"]
[691,"CSE_Unigene15939","SW_Unigene22410","-","-","+(Mostly)",1041,{"v":0.986,"d":"98.60%"},9,5,4,{"v":0.250195,"d":"0.250"},{"v":0.0409803,"d":"0.0410"},"gi|302142224|emb|CBI19427.3|","unnamed protein product [Vitis vinifera]","gi|147838436|emb|AM451154.2|","Vitis vinifera contig VV78X039931.3, whole genome shotgun sequence","sp|Q946Y7|SYP61_ARATH","Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1","-","-","K08500","osa:4324558","syntaxin of plants SYP6","-","-","GO:0005634//nucleus"]
[692,"CSE_Unigene10282","SW_CL6410_Contig2","-","-","+(Mostly)",816,{"v":0.99,"d":"99.00%"},8,3,5,{"v":0.760553,"d":"0.761"},{"v":0.662442,"d":"0.6624"},"gi|302142377|emb|CBI19580.3|","unnamed protein product [Vitis vinifera]","gi|147795683|emb|AM453660.2|","Vitis vinifera contig VV78X090510.7, whole genome shotgun sequence","sp|Q9SX99|OSB1_ARATH","Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1","-","-","-","-","-","GO:0006355//regulation of transcription, DNA-dependent;GO:0000002//mitochondrial genome maintenance;GO:0045910//negative regulation of DNA recombination","GO:0003697//single-stranded DNA binding","GO:0005739//mitochondrion;GO:0048046//apoplast"]
[693,"CSE_Unigene14523","SW_Unigene22135","-","-","+(Mostly)",627,{"v":0.981,"d":"98.10%"},12,10,2,{"v":0.0715494,"d":"0.072"},{"v":7.03062e-05,"d":"0.0001"},"gi|225458416|ref|XP_002283650.1|","PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera] >gi|147855629|emb|CAN79164.1| hypothetical protein VITISV_019246 [Vitis vinifera] >gi|302142422|emb|CBI19625.3| unnamed protein product [Vitis vinifera]","gi|359492102|ref|XM_002283614.2|","PREDICTED: Vitis vinifera 30S ribosomal protein S9, chloroplastic-like (LOC100248841), mRNA","sp|Q9XJ27|RR9_ARATH","30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1","COG0103","Ribosomal protein S9","K02996","vvi:100248841","small subunit ribosomal protein S9","GO:0006412//translation","GO:0003735//structural constituent of ribosome;GO:0019843//rRNA binding","GO:0009941//chloroplast envelope;GO:0000312//plastid small ribosomal subunit;GO:0009570//chloroplast stroma;GO:0022627//cytosolic small ribosomal subunit;GO:0016020//membrane"]
[694,"CSE_Unigene8664","SW_Unigene9264","-","-","+(Mostly)",840,{"v":0.992,"d":"99.20%"},7,3,4,{"v":0.346274,"d":"0.346"},{"v":0.160638,"d":"0.1606"},"gi|359492658|ref|XP_002281859.2|","PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290-like [Vitis vinifera]","gi|147780654|emb|AM428425.2|","Vitis vinifera contig VV78X060247.6, whole genome shotgun sequence","sp|Q9LQ16|PPR94_ARATH","Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[695,"CSE_Unigene13212","SW_Unigene13166","-","-","+(Mostly)",2175,{"v":0.992,"d":"99.20%"},18,8,10,{"v":0.367672,"d":"0.368"},{"v":0.0346856,"d":"0.0347"},"gi|302142507|emb|CBI19710.3|","unnamed protein product [Vitis vinifera]","gi|225458256|ref|XM_002281295.1|","PREDICTED: Vitis vinifera protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like (LOC100267767), mRNA","sp|Q8LEZ4|NFD5_ARATH","Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana GN=NFD5 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006333//chromatin assembly or disassembly;GO:0009220//pyrimidine ribonucleotide biosynthetic process","GO:0030527//structural constituent of chromatin;GO:0003677//DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity;GO:0003682//chromatin binding","GO:0005739//mitochondrion;GO:0000785//chromatin;GO:0009507//chloroplast;GO:0005634//nucleus"]
[696,"CSE_Unigene5779","SW_Unigene23194","-","-","+(Mostly)",1224,{"v":0.993,"d":"99.30%"},9,6,3,{"v":0.170272,"d":"0.170"},{"v":0.00152481,"d":"0.0015"},"gi|225458143|ref|XP_002280937.1|","PREDICTED: cysteine proteinase RD21a [Vitis vinifera] >gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera]","gi|359492171|ref|XM_002280901.2|","PREDICTED: Vitis vinifera cysteine proteinase RD21a-like (LOC100243729), mRNA","sp|P43297|RD21A_ARATH","Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1","COG4870","Cysteine protease","K01365","smo:SELMODRAFT_183539","cathepsin L [EC:3.4.22.15]","GO:0006508//proteolysis;GO:0055114//oxidation-reduction process","GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0008234//cysteine-type peptidase activity","GO:0005773//vacuole;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005576//extracellular region;GO:0005783//endoplasmic reticulum"]
[697,"CSE_Unigene1494","SW_Unigene18149","-","-","+(Mostly)",696,{"v":0.999,"d":"99.90%"},1,"NA",1,"NA","NA","gi|225458034|ref|XP_002277373.1|","PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera] >gi|302142630|emb|CBI19833.3| unnamed protein product [Vitis vinifera]","gi|349720169|emb|FQ392897.1|","Vitis vinifera clone SS0AFA3YL09","-","-","-","-","K03004","cre:CHLREDRAFT_166368","DNA-directed RNA polymerase I subunit RPA43","GO:0006626//protein targeting to mitochondrion;GO:0006351//transcription, DNA-dependent","GO:0003899//DNA-directed RNA polymerase activity","GO:0005634//nucleus"]
[698,"CSE_CL5120_Contig2","SW_CL4294_Contig2","-","-","+(Mostly)",1080,{"v":0.806,"d":"80.60%"},210,{"v":134.078,"d":"134"},{"v":75.9224,"d":"76"},{"v":0.10791,"d":"0.108"},{"v":8.81202e-43,"d":"0.0000"},"gi|225457871|ref|XP_002269356.1|","PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Vitis vinifera] >gi|302142719|emb|CBI19922.3| unnamed protein product [Vitis vinifera]","gi|225457870|ref|XM_002269320.1|","PREDICTED: Vitis vinifera probable cinnamyl alcohol dehydrogenase 6-like (LOC100262607), mRNA","sp|Q7XWU3|CADH6_ORYSJ","Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2","COG1064","Zn-dependent alcohol dehydrogenases","K00083","vvi:100245522","cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]","GO:0009809//lignin biosynthetic process;GO:0055114//oxidation-reduction process","GO:0045551//cinnamyl-alcohol dehydrogenase activity;GO:0052747;GO:0008270//zinc ion binding;GO:0000166//nucleotide binding;GO:0046029//mannitol dehydrogenase activity","-"]
[699,"CSE_Unigene18907","SW_Unigene1371","-","-","+(Mostly)",2370,{"v":0.996,"d":"99.60%"},9,7,2,{"v":0.0856924,"d":"0.086"},{"v":0.000814722,"d":"0.0008"},"gi|302142729|emb|CBI19932.3|","unnamed protein product [Vitis vinifera]","gi|147785746|emb|AM483444.2|","Vitis vinifera contig VV78X041507.6, whole genome shotgun sequence","sp|A2YV85|RH29_ORYSI","DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica GN=OsI_028228 PE=2 SV=2","COG0513","Superfamily II DNA and RNA helicases","K14808","vvi:100257398","ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]","-","GO:0008026//ATP-dependent helicase activity;GO:0003723//RNA binding;GO:0005524//ATP binding","GO:0005634//nucleus"]
[700,"CSE_Unigene13191","SW_Unigene21856","-","-","+(Mostly)",759,{"v":0.959,"d":"95.90%"},20,5,15,{"v":1.20021,"d":"1.200"},{"v":0.806599,"d":"0.8066"},"gi|225460530|ref|XP_002272533.1|","PREDICTED: uncharacterized protein LOC100252905 [Vitis vinifera] >gi|147803306|emb|CAN75474.1| hypothetical protein VITISV_002798 [Vitis vinifera] >gi|296081011|emb|CBI18515.3| unnamed protein product [Vitis vinifera]","gi|225460529|ref|XM_002272497.1|","PREDICTED: Vitis vinifera uncharacterized LOC100252905 (LOC100252905), mRNA","sp|Q9SDN0|DNJ20_ARATH","Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2","COG0484","DnaJ-class molecular chaperone with C-terminal Zn finger domain","K03686","bdi:100841335","molecular chaperone DnaJ","GO:0006457//protein folding;GO:0006950//response to stress","GO:0031072//heat shock protein binding","GO:0009507//chloroplast"]
[701,"CSE_Unigene16883","SW_CL1449_Contig1","-","-","+(Mostly)",1488,{"v":0.988,"d":"98.80%"},18,10,8,{"v":0.284973,"d":"0.285"},{"v":0.00828971,"d":"0.0083"},"gi|225460540|ref|XP_002272860.1|","PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Vitis vinifera] >gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]","gi|359493260|ref|XM_002272824.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At3g61360-like (LOC100261288), mRNA","sp|Q9M2C8|PP291_ARATH","Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[702,"CSE_Unigene1878","SW_CL4857_Contig2","-","-","+(Mostly)",1902,{"v":0.997,"d":"99.70%"},6,4,2,{"v":0.159413,"d":"0.159"},{"v":0.0334426,"d":"0.0334"},"gi|225457586|ref|XP_002272933.1|","PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera] >gi|297745571|emb|CBI40736.3| unnamed protein product [Vitis vinifera]","gi|225457585|ref|XM_002272897.1|","PREDICTED: Vitis vinifera uncharacterized LOC100240993 (LOC100240993), mRNA","sp|Q6NPG7|Y5382_ARATH","Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1","-","-","-","-","-","-","-","GO:0005739//mitochondrion"]
[703,"CSE_Unigene320","SW_Unigene21695","-","-","+(Mostly)",1362,{"v":0.991,"d":"99.10%"},12,10,2,{"v":0.0783891,"d":"0.078"},{"v":7.97758e-06,"d":"0.0000"},"gi|147795191|emb|CAN69459.1|","hypothetical protein VITISV_021576 [Vitis vinifera]","gi|359491855|ref|XM_002273718.2|","PREDICTED: Vitis vinifera glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like, transcript variant 1 (LOC100259814), mRNA","sp|P12859|G3PB_PEA","Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2","COG0057","Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase","K05298","vvi:100259814","glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]","GO:0055114//oxidation-reduction process;GO:0009744//response to sucrose stimulus;GO:0009416//response to light stimulus;GO:0009409//response to cold;GO:0006006//glucose metabolic process;GO:0015979//photosynthesis;GO:0046686//response to cadmium ion","GO:0051287//NAD binding;GO:0047100//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity;GO:0050661//NADP binding","GO:0009522//photosystem I;GO:0016021//integral to membrane;GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane;GO:0009570//chloroplast stroma;GO:0010319//stromule;GO:0048046//apoplast"]
[704,"CSE_Unigene19172","SW_Unigene16181","-","-","+(Mostly)",1830,{"v":0.993,"d":"99.30%"},12,7,5,{"v":0.285246,"d":"0.285"},{"v":0.0301668,"d":"0.0302"},"gi|225457618|ref|XP_002274236.1|","PREDICTED: dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit 1 [Vitis vinifera] >gi|297745585|emb|CBI40750.3| unnamed protein product [Vitis vinifera]","gi|225457617|ref|XM_002274200.1|","PREDICTED: Vitis vinifera dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit 1-like (LOC100249589), mRNA","sp|Q9SFX3|OST1A_ARATH","Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1","-","-","K12666","vvi:100249589","oligosaccharyltransferase complex subunit alpha (ribophorin I)","GO:0009086//methionine biosynthetic process;GO:0030244//cellulose biosynthetic process;GO:0006499//N-terminal protein myristoylation;GO:0006486//protein glycosylation;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation","GO:0004579//dolichyl-diphosphooligosaccharide-protein glycotransferase activity","GO:0016021//integral to membrane;GO:0009507//chloroplast;GO:0005789//endoplasmic reticulum membrane;GO:0005794//Golgi apparatus"]
[705,"CSE_Unigene13798","SW_CL3332_Contig1","-","-","+(Mostly)",498,{"v":0.992,"d":"99.20%"},2,1,1,{"v":0.319952,"d":"0.320"},{"v":0.36883,"d":"0.3688"},"gi|225457620|ref|XP_002274272.1|","PREDICTED: uncharacterized protein LOC100244433 [Vitis vinifera] >gi|297745586|emb|CBI40751.3| unnamed protein product [Vitis vinifera]","gi|359491860|ref|XM_002274236.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244433 (LOC100244433), mRNA","sp|Q9SM57|OEP21_PEA","Outer envelope pore protein 21, chloroplastic OS=Pisum sativum GN=OEP21 PE=1 SV=1","-","-","-","-","-","-","-","GO:0005739//mitochondrion;GO:0009941//chloroplast envelope"]
[706,"CSE_Unigene19426","SW_Unigene15112","-","-","+(Mostly)",1431,{"v":0.985,"d":"98.50%"},21,10,11,{"v":0.438022,"d":"0.438"},{"v":0.0839072,"d":"0.0839"},"gi|225457644|ref|XP_002275214.1|","PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Vitis vinifera]","gi|225457643|ref|XM_002275178.1|","PREDICTED: Vitis vinifera short-chain dehydrogenase/reductase family 42E member 1-like (LOC100241063), mRNA","sp|Q9FX01|HSDD1_ARATH","3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1","COG0451","Nucleoside-diphosphate-sugar epimerases","K07748","ath:AT1G47290","sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170]","GO:0006694//steroid biosynthetic process;GO:0055114//oxidation-reduction process","GO:0003854//3-beta-hydroxy-delta5-steroid dehydrogenase activity;GO:0047012//sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity;GO:0016853//isomerase activity;GO:0000166//nucleotide binding","GO:0005783//endoplasmic reticulum"]
[707,"CSE_CL4977_Contig1","SW_Unigene8075","-","-","+(Mostly)",990,{"v":0.986,"d":"98.60%"},14,7,7,{"v":0.341792,"d":"0.342"},{"v":0.0429129,"d":"0.0429"},"gi|225457685|ref|XP_002276647.1|","PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Vitis vinifera] >gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera]","gi|359491882|ref|XM_002276611.2|","PREDICTED: Vitis vinifera chlorophyll a-b binding protein of LHCII type I, chloroplastic-like (LOC100256544), mRNA","sp|P22686|CB2_CHLMO","Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1","-","-","K14172","vvi:100256544","light-harvesting complex II chlorophyll a/b binding protein 7","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0015996//chlorophyll catabolic process;GO:0009637//response to blue light;GO:0010218//response to far red light;GO:0009765//photosynthesis, light harvesting","GO:0016168//chlorophyll binding;GO:0046872//metal ion binding","GO:0030076//light-harvesting complex;GO:0009507//chloroplast;GO:0016020//membrane"]
[708,"CSE_Unigene987","SW_CL5615_Contig2","-","-","+(Mostly)",3072,{"v":0.993,"d":"99.30%"},20,7,13,{"v":0.619286,"d":"0.619"},{"v":0.301824,"d":"0.3018"},"gi|297745630|emb|CBI40795.3|","unnamed protein product [Vitis vinifera]","gi|359491934|ref|XM_002273967.2|","PREDICTED: Vitis vinifera uncharacterized LOC100259801 (LOC100259801), mRNA","-","-","COG0457","FOG: TPR repeat","K12600","vvi:100259801","superkiller protein 3","GO:0006346//methylation-dependent chromatin silencing;GO:0016246//RNA interference","GO:0016740//transferase activity","GO:0005737//cytoplasm"]
[709,"CSE_CL3828_Contig2","SW_Unigene15428","-","-","+(Mostly)",1035,{"v":0.99,"d":"99.00%"},10,7,3,{"v":0.190021,"d":"0.190"},{"v":0.0125189,"d":"0.0125"},"gi|225460275|ref|XP_002282036.1|","PREDICTED: probable esterase At1g33990 [Vitis vinifera] >gi|296089430|emb|CBI39249.3| unnamed protein product [Vitis vinifera]","gi|359493508|ref|XM_002282000.2|","PREDICTED: Vitis vinifera probable esterase At1g33990-like (LOC100241390), mRNA","sp|Q9LVL9|MES18_ARATH","Methylesterase 18 OS=Arabidopsis thaliana GN=MES18 PE=2 SV=1","-","-","K13544","aly:ARALYDRAFT_493208","pheophorbidase [EC:3.1.1.82]","-","GO:0050529","GO:0005737//cytoplasm;GO:0005886//plasma membrane"]
[710,"CSE_Unigene595","SW_Unigene21859","-","-","+(Mostly)",1275,{"v":0.99,"d":"99.00%"},13,9,4,{"v":0.165055,"d":"0.165"},{"v":0.00192454,"d":"0.0019"},"gi|225460309|ref|XP_002282574.1|","PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera] >gi|296089465|emb|CBI39284.3| unnamed protein product [Vitis vinifera]","gi|359493305|ref|XM_002282538.2|","PREDICTED: Vitis vinifera protein TIC 40, chloroplastic-like (LOC100265473), mRNA","sp|Q8GT66|TIC40_PEA","Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1","-","-","K09560","zma:100273214","suppressor of tumorigenicity protein 13","GO:0009902//chloroplast relocation;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization;GO:0006399//tRNA metabolic process;GO:0045037//protein import into chloroplast stroma","GO:0005515//protein binding","GO:0031897//Tic complex;GO:0009535//chloroplast thylakoid membrane"]
[711,"CSE_Unigene16648","SW_Unigene5695","-","-","+(Mostly)",933,{"v":0.989,"d":"98.90%"},10,5,5,{"v":0.316221,"d":"0.316"},{"v":0.0682413,"d":"0.0682"},"gi|296089470|emb|CBI39289.3|","unnamed protein product [Vitis vinifera]","gi|349703445|emb|FQ383408.1|","Vitis vinifera clone SS0ABG20YA02","sp|Q9FIJ7|KADC2_ARATH","Probable adenylate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g47840 PE=2 SV=1","COG0563","Adenylate kinase and related kinases","K00939","vvi:100853175","adenylate kinase [EC:2.7.4.3]","GO:0046777//protein autophosphorylation;GO:0046939//nucleotide phosphorylation;GO:0006354//DNA-dependent transcription, elongation;GO:0016117//carotenoid biosynthetic process;GO:0010155//regulation of proton transport","GO:0004017//adenylate kinase activity;GO:0005524//ATP binding","GO:0009570//chloroplast stroma"]
[712,"CSE_Unigene17888","SW_Unigene14236","-","-","+(Mostly)",1293,{"v":0.994,"d":"99.40%"},8,6,2,{"v":0.115803,"d":"0.116"},{"v":0.00508073,"d":"0.0051"},"gi|359493091|ref|XP_002267510.2|","PREDICTED: protease Do-like 1, chloroplastic-like [Vitis vinifera] >gi|296081154|emb|CBI18180.3| unnamed protein product [Vitis vinifera]","gi|359493090|ref|XM_002267474.2|","PREDICTED: Vitis vinifera protease Do-like 1, chloroplastic-like (LOC100241896), mRNA","sp|O22609|DEGP1_ARATH","Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2","COG0265","Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain","K01362","osa:4339651","[EC:3.4.21.-]","GO:0006098//pentose-phosphate shunt;GO:0010304//PSII associated light-harvesting complex II catabolic process;GO:0015996//chlorophyll catabolic process;GO:0006508//proteolysis;GO:0010206//photosystem II repair;GO:0019761//glucosinolate biosynthetic process","GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0004252//serine-type endopeptidase activity","GO:0005739//mitochondrion;GO:0009535//chloroplast thylakoid membrane;GO:0005634//nucleus;GO:0009543//chloroplast thylakoid lumen"]
[713,"CSE_Unigene16590","SW_Unigene13570","-","-","+(Mostly)",861,{"v":0.981,"d":"98.10%"},13,7,6,{"v":0.228058,"d":"0.228"},{"v":0.00968783,"d":"0.0097"},"gi|225459918|ref|XP_002264295.1|","PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Vitis vinifera] >gi|147770824|emb|CAN76428.1| hypothetical protein VITISV_023565 [Vitis vinifera] >gi|297734735|emb|CBI16969.3| unnamed protein product [Vitis vinifera]","gi|359493542|ref|XM_002264259.2|","PREDICTED: Vitis vinifera chlorophyll a-b binding protein CP26, chloroplastic-like (LOC100246457), mRNA","sp|Q9XF89|CB5_ARATH","Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1","-","-","K08916","vvi:100246457","light-harvesting complex II chlorophyll a/b binding protein 5","GO:0009744//response to sucrose stimulus;GO:0010114//response to red light;GO:0010196//nonphotochemical quenching;GO:0006364//rRNA processing;GO:0009637//response to blue light;GO:0010155//regulation of proton transport;GO:0010218//response to far red light;GO:0009765//photosynthesis, light harvesting;GO:0009644//response to high light intensity;GO:0019344//cysteine biosynthetic process","GO:0016168//chlorophyll binding;GO:0046872//metal ion binding","GO:0009517//PSII associated light-harvesting complex II;GO:0009783//photosystem II antenna complex;GO:0009533//chloroplast stromal thylakoid;GO:0010287//plastoglobule"]
[714,"CSE_Unigene8916","SW_Unigene22090","-","-","+(Mostly)",516,{"v":0.996,"d":"99.60%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225461044|ref|XP_002281441.1|","PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera] >gi|297735982|emb|CBI23956.3| unnamed protein product [Vitis vinifera]","gi|359494015|ref|XM_002281405.2|","PREDICTED: Vitis vinifera protein LHCP TRANSLOCATION DEFECT-like (LOC100260680), mRNA","sp|Q8VY88|LTD_ARATH","Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana GN=LTD PE=1 SV=1","-","-","-","-","-","GO:0006655//phosphatidylglycerol biosynthetic process;GO:0006098//pentose-phosphate shunt;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0080167//response to karrikin;GO:0015031//protein transport;GO:0090391//granum assembly","-","GO:0009570//chloroplast stroma"]
[715,"CSE_Unigene19567","SW_Unigene22797","-","-","+(Mostly)",852,{"v":0.995,"d":"99.50%"},4,1,3,{"v":1.04946,"d":"1.049"},{"v":0.695045,"d":"0.6950"},"gi|359493644|ref|XP_002283758.2|","PREDICTED: chalcone-flavonone isomerase-like [Vitis vinifera] >gi|302142793|emb|CBI20088.3| unnamed protein product [Vitis vinifera]","gi|359493643|ref|XM_002283722.2|","PREDICTED: Vitis vinifera chalcone-flavonone isomerase-like (LOC100267517), mRNA","sp|Q3Y4F4|CFI_CANGE","Chalcone-flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1","-","-","K14442","ota:Ot11g02100","ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]","GO:0009813//flavonoid biosynthetic process;GO:0006631//fatty acid metabolic process","GO:0045430//chalcone isomerase activity;GO:0005504//fatty acid binding","GO:0009570//chloroplast stroma"]
[716,"CSE_Unigene15620","SW_Unigene20574","-","-","+(Mostly)",3621,{"v":0.994,"d":"99.40%"},23,{"v":8.16897,"d":"8"},{"v":14.831,"d":"15"},{"v":0.450552,"d":"0.451"},{"v":0.0605106,"d":"0.0605"},"gi|225461640|ref|XP_002283071.1|","PREDICTED: uncharacterized protein LOC100248637 [Vitis vinifera]","gi|225461639|ref|XM_002283035.1|","PREDICTED: Vitis vinifera uncharacterized LOC100248637 (LOC100248637), mRNA","sp|Q9SD34|C3H44_ARATH","Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g51120 PE=2 SV=3","-","-","K11643","ppp:PHYPADRAFT_145844","chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]","GO:0043972//histone H3-K23 acetylation;GO:0070918//production of small RNA involved in gene silencing by RNA;GO:0080188//RNA-directed DNA methylation;GO:0043971//histone H3-K18 acetylation;GO:0035194//posttranscriptional gene silencing by RNA;GO:0044030//regulation of DNA methylation;GO:0044154//histone H3-K14 acetylation","GO:0042393//histone binding;GO:0004402//histone acetyltransferase activity;GO:0046872//metal ion binding;GO:0010385//double-stranded methylated DNA binding","GO:0009506//plasmodesma;GO:0005634//nucleus"]
[717,"CSE_CL6855_Contig1","SW_CL7526_Contig1","-","-","+(Mostly)",1284,{"v":0.995,"d":"99.50%"},7,5,2,{"v":0.160775,"d":"0.161"},{"v":0.0237695,"d":"0.0238"},"gi|225461638|ref|XP_002283063.1|","PREDICTED: uncharacterized protein LOC100253735 [Vitis vinifera]","gi|359493607|ref|XM_002283027.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253735 (LOC100253735), mRNA","sp|Q9MAH3|DJ1B_ARATH","Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1","COG0693","Putative intracellular protease/amidase","K03152","vvi:100253735","4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis","GO:0046686//response to cadmium ion;GO:0006486//protein glycosylation;GO:0046685//response to arsenic-containing substance","-","GO:0005773//vacuole;GO:0005886//plasma membrane;GO:0009570//chloroplast stroma"]
[718,"CSE_Unigene11345","SW_Unigene13785","-","-","+(Mostly)",684,{"v":0.99,"d":"99.00%"},7,6,1,{"v":0.0552003,"d":"0.055"},{"v":0.00130019,"d":"0.0013"},"gi|225461516|ref|XP_002285129.1|","PREDICTED: PRA1 family protein H-like [Vitis vinifera]","gi|225461515|ref|XM_002285093.1|","PREDICTED: Vitis vinifera PRA1 family protein H-like (LOC100253837), mRNA","sp|Q8LFP1|PRA1H_ARATH","PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1","-","-","-","-","-","GO:0006914//autophagy;GO:0016192//vesicle-mediated transport","-","GO:0005783//endoplasmic reticulum"]
[719,"CSE_Unigene2032","SW_Unigene12668","-","-","+(Mostly)",762,{"v":0.991,"d":"99.10%"},7,5,2,{"v":0.117431,"d":"0.117"},{"v":0.00850015,"d":"0.0085"},"gi|225461387|ref|XP_002284777.1|","PREDICTED: stem-specific protein TSJT1 [Vitis vinifera] >gi|302143042|emb|CBI20337.3| unnamed protein product [Vitis vinifera]","gi|225461386|ref|XM_002284741.1|","PREDICTED: Vitis vinifera stem-specific protein TSJT1-like (LOC100245111), mRNA","sp|P24805|TSJT1_TOBAC","Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1","-","-","K01953","ppp:PHYPADRAFT_173106","asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]","GO:0009862//systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0010310//regulation of hydrogen peroxide metabolic process;GO:0001666//response to hypoxia","GO:0005515//protein binding","GO:0009506//plasmodesma;GO:0005886//plasma membrane;GO:0005634//nucleus;GO:0005829//cytosol"]
[720,"CSE_Unigene939","SW_Unigene4585","-","-","+(Mostly)",1431,{"v":0.987,"d":"98.70%"},12,3,9,{"v":0.862916,"d":"0.863"},{"v":0.689228,"d":"0.6892"},"gi|359493891|ref|XP_003634688.1|","PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5-like isoform 2 [Vitis vinifera] >gi|302143074|emb|CBI20369.3| unnamed protein product [Vitis vinifera]","gi|359493890|ref|XM_003634640.1|","PREDICTED: Vitis vinifera probable ADP-ribosylation factor GTPase-activating protein AGD5-like, transcript variant 2 (LOC100262374), mRNA","sp|Q9FL69|AGD5_ARATH","Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1","COG5347","GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport","K12486","vvi:100262374","stromal membrane-associated protein","GO:0006499//N-terminal protein myristoylation;GO:0010227//floral organ abscission;GO:0032857//activation of ARF GTPase activity","GO:0008270//zinc ion binding;GO:0003677//DNA binding;GO:0008060//ARF GTPase activator activity","GO:0005802//trans-Golgi network;GO:0005829//cytosol;GO:0005768//endosome;GO:0005634//nucleus"]
[721,"CSE_Unigene11841","SW_Unigene22682","-","-","+(Mostly)",624,{"v":0.987,"d":"98.70%"},8,5,3,{"v":0.24958,"d":"0.250"},{"v":0.0547869,"d":"0.0548"},"gi|225461922|ref|XP_002267869.1|","PREDICTED: protein TIC 20-v, chloroplastic [Vitis vinifera]","gi|359494353|ref|XM_002267833.2|","PREDICTED: Vitis vinifera protein TIC 20-v, chloroplastic-like (LOC100261678), mRNA","sp|Q9FM67|TI205_ARATH","Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana GN=TIC20-V PE=2 SV=1","-","-","-","-","-","-","-","GO:0009535//chloroplast thylakoid membrane"]
[722,"CSE_Unigene16232","SW_Unigene13967","-","-","+(Mostly)",939,{"v":0.996,"d":"99.60%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225462041|ref|XP_002274754.1|","PREDICTED: THO complex subunit 3 [Vitis vinifera] >gi|147789347|emb|CAN62349.1| hypothetical protein VITISV_004943 [Vitis vinifera] >gi|296089987|emb|CBI39806.3| unnamed protein product [Vitis vinifera]","gi|225462040|ref|XM_002274718.1|","PREDICTED: Vitis vinifera THO complex subunit 3-like (LOC100241262), mRNA","sp|P93107|PF20_CHLRE","Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1","COG2319","FOG: WD40 repeat","K12880","vvi:100241262","THO complex subunit 3","GO:0010267//production of ta-siRNAs involved in RNA interference","GO:0000166//nucleotide binding","GO:0005737//cytoplasm;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[723,"CSE_Unigene183","SW_Unigene6854","-","-","+(Mostly)",1476,{"v":0.995,"d":"99.50%"},7,3,4,{"v":0.309353,"d":"0.309"},{"v":0.12951,"d":"0.1295"},"gi|225462209|ref|XP_002269180.1|","PREDICTED: protein methyltransferase hemK homolog [Vitis vinifera]","gi|225462208|ref|XM_002269144.1|","PREDICTED: Vitis vinifera protein methyltransferase hemK homolog-like (LOC100257585), mRNA","-","-","COG2890","Methylase of polypeptide chain release factors","K02493","vvi:100257585","release factor glutamine methyltransferase [EC:2.1.1.-]","GO:0006783//heme biosynthetic process;GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0009507//chloroplast"]
[724,"CSE_Unigene2051","SW_CL8008_Contig2","-","-","+(Mostly)",2412,{"v":0.993,"d":"99.30%"},17,10,7,{"v":0.257085,"d":"0.257"},{"v":0.00554645,"d":"0.0055"},"gi|225462348|ref|XP_002269152.1|","PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis vinifera] >gi|297736083|emb|CBI24121.3| unnamed protein product [Vitis vinifera]","gi|225462347|ref|XM_002269116.1|","PREDICTED: Vitis vinifera zinc finger CCCH domain-containing protein 37-like (LOC100260359), mRNA","sp|Q941Q3|C3H37_ARATH","Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1","-","-","K08852","vcn:VOLCADRAFT_107956","serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]","GO:0001709//cell fate determination;GO:0006355//regulation of transcription, DNA-dependent","GO:0003723//RNA binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[725,"CSE_CL2933_Contig2","SW_Unigene16965","-","-","+(Mostly)",777,{"v":0.987,"d":"98.70%"},10,6,4,{"v":0.289022,"d":"0.289"},{"v":0.0499318,"d":"0.0499"},"gi|359494600|ref|XP_002265839.2|","PREDICTED: uncharacterized protein LOC100263890 [Vitis vinifera]","gi|359494599|ref|XM_002265803.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263890 (LOC100263890), mRNA","-","-","COG1963","Uncharacterized protein conserved in bacteria","K09775","ota:Ot06g03570","hypothetical protein","-","-","GO:0044464//cell part"]
[726,"CSE_Unigene16292","SW_Unigene16602","-","-","+(Mostly)",1197,{"v":0.993,"d":"99.30%"},6,2,4,{"v":0.924623,"d":"0.925"},{"v":0.897277,"d":"0.8973"},"gi|359494626|ref|XP_002265047.2|","PREDICTED: ribosomal RNA large subunit methyltransferase I-like [Vitis vinifera]","gi|359494625|ref|XM_002265011.2|","PREDICTED: Vitis vinifera ribosomal RNA large subunit methyltransferase I-like (LOC100262230), mRNA","-","-","COG1092","Predicted SAM-dependent methyltransferases","-","-","-","GO:0032259//methylation","GO:0003723//RNA binding;GO:0008168//methyltransferase activity","GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[727,"CSE_Unigene13233","SW_Unigene15573","-","-","+(Mostly)",642,{"v":0.995,"d":"99.50%"},3,1,2,{"v":0.622941,"d":"0.623"},{"v":0.544567,"d":"0.5446"},"gi|225460981|ref|XP_002280308.1|","PREDICTED: ubiquitin thioesterase OTU1 isoform 3 [Vitis vinifera]","gi|359494035|ref|XM_003634665.1|","PREDICTED: Vitis vinifera ubiquitin thioesterase OTU1-like (LOC100260612), mRNA","sp|Q8LBZ4|OTU_ARATH","OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana GN=At3g57810 PE=2 SV=1","COG5539","Predicted cysteine protease (OTU family)","K13719","vvi:100260612","ubiquitin thioesterase OTU1 [EC:3.1.2.-]","-","GO:0008234//cysteine-type peptidase activity","GO:0005829//cytosol"]
[728,"CSE_Unigene1446","SW_Unigene14410","-","-","+(Mostly)",558,{"v":0.993,"d":"99.30%"},4,3,1,{"v":0.134733,"d":"0.135"},{"v":0,"d":"0.0000"},"gi|225460977|ref|XP_002280251.1|","PREDICTED: ribonuclease UK114-like [Vitis vinifera]","gi|349713013|emb|FQ379836.1|","Vitis vinifera clone SS0AEA1YD20","-","-","COG0251","Putative translation initiation inhibitor, yjgF family","-","-","-","GO:0009651//response to salt stress;GO:0006096//glycolysis;GO:0006094//gluconeogenesis;GO:0046686//response to cadmium ion;GO:0019761//glucosinolate biosynthetic process","GO:0004521//endoribonuclease activity","GO:0005739//mitochondrion;GO:0009941//chloroplast envelope;GO:0009579//thylakoid;GO:0009570//chloroplast stroma;GO:0005773//vacuole"]
[729,"CSE_Unigene11136","SW_Unigene8834","-","-","+(Mostly)",1314,{"v":0.998,"d":"99.80%"},3,1,2,{"v":0.628197,"d":"0.628"},{"v":0.546299,"d":"0.5463"},"gi|225460965|ref|XP_002280015.1|","PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] >gi|297737439|emb|CBI26640.3| unnamed protein product [Vitis vinifera]","gi|225460964|ref|XM_002279979.1|","PREDICTED: Vitis vinifera uncharacterized LOC100253742 (LOC100253742), mRNA","-","-","-","-","-","-","-","GO:0000911//cytokinesis by cell plate formation;GO:0000226//microtubule cytoskeleton organization","GO:0051011//microtubule minus-end binding","GO:0005634//nucleus;GO:0005876//spindle microtubule"]
[730,"CSE_Unigene13393","SW_CL2914_Contig2","-","-","+(Mostly)",1083,{"v":0.991,"d":"99.10%"},10,5,5,{"v":0.336009,"d":"0.336"},{"v":0.0814014,"d":"0.0814"},"gi|225460893|ref|XP_002278706.1|","PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]","gi|225460892|ref|XM_002278670.1|","PREDICTED: Vitis vinifera ribonuclease 3-like protein 2-like (LOC100243580), mRNA","sp|Q9LTQ0|RTL2_ARATH","Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1","COG0571","dsRNA-specific ribonuclease","K11592","ath:AT1G01040","endoribonuclease Dicer [EC:3.1.26.-]","GO:0016075//rRNA catabolic process;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0051607//defense response to virus","GO:0004525//ribonuclease III activity;GO:0003725//double-stranded RNA binding","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[731,"CSE_Unigene1520","SW_Unigene1375","-","-","+(Strictly)",1938,{"v":0.984,"d":"98.40%"},23,{"v":12.7771,"d":"13"},{"v":10.2229,"d":"10"},{"v":0.322922,"d":"0.323"},{"v":0.00846559,"d":"0.0085"},"gi|225463083|ref|XP_002263640.1|","PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]","gi|225463082|ref|XM_002263604.1|","PREDICTED: Vitis vinifera DEAD-box ATP-dependent RNA helicase 39-like (LOC100247785), mRNA","sp|Q56X76|RH39_ARATH","DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2","COG0513","Superfamily II DNA and RNA helicases","K13179","bdi:100838222","ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]","GO:1901259//chloroplast rRNA processing;GO:0080158//chloroplast ribulose bisphosphate carboxylase complex biogenesis;GO:0009658//chloroplast organization;GO:0006399//tRNA metabolic process","GO:0070180//LSU rRNA binding;GO:0008026//ATP-dependent helicase activity;GO:0005524//ATP binding","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[732,"CSE_Unigene17831","SW_Unigene19401","-","-","+(Strictly)",3330,{"v":0.994,"d":"99.40%"},18,12,6,{"v":0.1558,"d":"0.156"},{"v":0.000143411,"d":"0.0001"},"gi|225424807|ref|XP_002267766.1|","PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Vitis vinifera]","gi|225424806|ref|XM_002267730.1|","PREDICTED: Vitis vinifera DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like (LOC100253458), mRNA","sp|B9DFG3|ISE2_ARATH","DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic OS=Arabidopsis thaliana GN=ISE2 PE=1 SV=2","COG4581","Superfamily II RNA helicase","K12599","cme:CMA059C","antiviral helicase SKI2 [EC:3.6.4.-]","GO:0010497//plasmodesmata-mediated intercellular transport;GO:0016556//mRNA modification;GO:0016441//posttranscriptional gene silencing;GO:0009793//embryo development ending in seed dormancy","GO:0003676//nucleic acid binding;GO:0008026//ATP-dependent helicase activity;GO:0005524//ATP binding;GO:0003724//RNA helicase activity","GO:0010494//cytoplasmic stress granule;GO:0009570//chloroplast stroma"]
[733,"CSE_Unigene12740","SW_Unigene15297","-","-","+(Strictly)",1365,{"v":0.996,"d":"99.60%"},6,4,2,{"v":0.168114,"d":"0.168"},{"v":0.0385572,"d":"0.0386"},"gi|225430658|ref|XP_002268375.1|","PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Vitis vinifera] >gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]","gi|359476565|ref|XM_002268339.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like (LOC100260382), mRNA","sp|Q94JX6|PP391_ARATH","Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[734,"CSE_CL7007_Contig1","SW_CL8479_Contig2","-","-","+(Strictly)",1308,{"v":0.998,"d":"99.80%"},3,1,2,{"v":0.647116,"d":"0.647"},{"v":0.554719,"d":"0.5547"},"gi|225431711|ref|XP_002267516.1|","PREDICTED: histone deacetylase 14 [Vitis vinifera] >gi|296088531|emb|CBI37522.3| unnamed protein product [Vitis vinifera]","gi|225431710|ref|XM_002267480.1|","PREDICTED: Vitis vinifera histone deacetylase-like (LOC100244854), mRNA","sp|Q941D6|HDA14_ARATH","Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1","COG0123","Deacetylases, including yeast histone deacetylase and acetoin utilization protein","K11407","ppp:PHYPADRAFT_138277","histone deacetylase 6/10 [EC:3.5.1.98]","GO:0006098//pentose-phosphate shunt;GO:0019760//glucosinolate metabolic process;GO:0019252//starch biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016575//histone deacetylation;GO:0000023//maltose metabolic process;GO:0016556//mRNA modification;GO:0090042//tubulin deacetylation;GO:0010027//thylakoid membrane organization","GO:0051721//protein phosphatase 2A binding;GO:0004407//histone deacetylase activity;GO:0042903//tubulin deacetylase activity;GO:0043621//protein self-association;GO:0043014//alpha-tubulin binding;GO:0048487//beta-tubulin binding","GO:0009507//chloroplast;GO:0005829//cytosol;GO:0005634//nucleus"]
[735,"CSE_CL4089_Contig4","SW_Unigene8187","-","-","+(Strictly)",576,{"v":0.981,"d":"98.10%"},11,3,8,{"v":1.02092,"d":"1.021"},{"v":0.972841,"d":"0.9728"},"gi|147788139|emb|CAN67062.1|","hypothetical protein VITISV_017539 [Vitis vinifera]","gi|359476927|ref|XM_002280602.2|","PREDICTED: Vitis vinifera uncharacterized LOC100248924 (LOC100248924), mRNA","-","-","-","-","K01528","smo:SELMODRAFT_437242","dynamin GTPase [EC:3.6.5.5]","GO:0046777//protein autophosphorylation;GO:0055114//oxidation-reduction process;GO:0019684//photosynthesis, light reaction;GO:0010155//regulation of proton transport;GO:0010258//NADH dehydrogenase complex (plastoquinone) assembly","GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","GO:0010598//NAD(P)H dehydrogenase complex (plastoquinone);GO:0009535//chloroplast thylakoid membrane;GO:0005886//plasma membrane"]
[736,"CSE_Unigene17828","SW_CL1962_Contig2","-","-","+(Strictly)",2520,{"v":0.992,"d":"99.20%"},21,14,7,{"v":0.148808,"d":"0.149"},{"v":2.61152e-05,"d":"0.0000"},"gi|225430498|ref|XP_002283327.1|","PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Vitis vinifera] >gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]","gi|147852002|emb|AM428976.2|","Vitis vinifera contig VV78X135820.10, whole genome shotgun sequence","sp|Q9SZ52|PP344_ARATH","Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006098//pentose-phosphate shunt;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0019252//starch biosynthetic process;GO:0009664//plant-type cell wall organization;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0010075//regulation of meristem growth;GO:0009902//chloroplast relocation;GO:0000023//maltose metabolic process;GO:0046777//protein autophosphorylation;GO:0034660//ncRNA metabolic process;GO:0000272//polysaccharide catabolic process;GO:0010027//thylakoid membrane organization","-","-"]
[737,"CSE_Unigene14432","SW_Unigene15839","-","-","+(Strictly)",1077,{"v":0.991,"d":"99.10%"},10,5,5,{"v":0.338448,"d":"0.338"},{"v":0.0831443,"d":"0.0831"},"gi|225435550|ref|XP_002285606.1|","PREDICTED: uncharacterized protein YMR315W-like [Vitis vinifera]","gi|359478418|ref|XM_002285570.2|","PREDICTED: Vitis vinifera uncharacterized LOC100245027 (LOC100245027), mRNA","-","-","COG0673","Predicted dehydrogenases and related proteins","-","-","-","GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity;GO:0000166//nucleotide binding","GO:0005829//cytosol;GO:0005886//plasma membrane"]
[738,"CSE_Unigene366","SW_Unigene559","-","-","+(Strictly)",1050,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.101636,"d":"0.102"},{"v":0.0395323,"d":"0.0395"},"gi|225438676|ref|XP_002282060.1|","PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Vitis vinifera] >gi|296082435|emb|CBI21440.3| unnamed protein product [Vitis vinifera]","gi|359480686|ref|XM_002282024.2|","PREDICTED: Vitis vinifera methionine aminopeptidase 1D (MAP1D), mRNA","sp|Q9FV50|AMP1D_ARATH","Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1","COG0024","Methionine aminopeptidase","K01265","vvi:100266473","methionyl aminopeptidase [EC:3.4.11.18]","GO:0031365//N-terminal protein amino acid modification;GO:0006508//proteolysis;GO:0019408//dolichol biosynthetic process;GO:0009737//response to abscisic acid stimulus","GO:0046872//metal ion binding;GO:0004177//aminopeptidase activity;GO:0008235//metalloexopeptidase activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[739,"CSE_Unigene17367","SW_Unigene13585","-","-","+(Strictly)",3027,{"v":0.994,"d":"99.40%"},18,11,7,{"v":0.208064,"d":"0.208"},{"v":0.00113221,"d":"0.0011"},"gi|297743876|emb|CBI36846.3|","unnamed protein product [Vitis vinifera]","gi|359479903|ref|XM_002267399.2|","PREDICTED: Vitis vinifera zinc finger CCCH domain-containing protein 31-like (LOC100250411), mRNA","sp|O22243|C3H31_ARATH","Zinc finger CCCH domain-containing protein 31 OS=Arabidopsis thaliana GN=At2g47680 PE=2 SV=2","COG1643","HrpA-like helicases","K14442","bdi:100834725","ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0006139//nucleobase-containing compound metabolic process","GO:0003676//nucleic acid binding;GO:0043167//ion binding;GO:0000166//nucleotide binding;GO:0004386//helicase activity","GO:0009507//chloroplast"]
[740,"CSE_Unigene14596","SW_Unigene5820","-","-","+(Strictly)",675,{"v":0.991,"d":"99.10%"},3,"NA",3,"NA","NA","gi|225439433|ref|XP_002265850.1|","PREDICTED: uncharacterized protein LOC100252319 [Vitis vinifera] >gi|296083157|emb|CBI22793.3| unnamed protein product [Vitis vinifera]","gi|359481140|ref|XM_002265814.2|","PREDICTED: Vitis vinifera uncharacterized LOC100252319 (LOC100252319), mRNA","sp|Q9SR92|STR10_ARATH","Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana GN=STR10 PE=2 SV=1","-","-","-","-","-","-","-","GO:0009534//chloroplast thylakoid;GO:0009941//chloroplast envelope"]
[741,"CSE_Unigene15815","SW_Unigene22309","-","-","+(Strictly)",882,{"v":0.995,"d":"99.50%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225439229|ref|XP_002276761.1|","PREDICTED: FH protein interacting protein FIP2 [Vitis vinifera] >gi|296085912|emb|CBI31236.3| unnamed protein product [Vitis vinifera]","gi|359480958|ref|XM_002276725.2|","PREDICTED: Vitis vinifera FIP2 (FH protein interacting protein 2); voltage-gated potassium channel-like (LOC100265698), mRNA","sp|Q9SE95|FIP2_ARATH","FH protein interacting protein FIP2 OS=Arabidopsis thaliana GN=FIP2 PE=1 SV=1","COG1357","Uncharacterized low-complexity proteins","K15074","pop:POPTR_593739","BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein","GO:0006813//potassium ion transport;GO:0051260//protein homooligomerization","GO:0005249//voltage-gated potassium channel activity;GO:0005515//protein binding","GO:0008076//voltage-gated potassium channel complex;GO:0005576//extracellular region;GO:0005773//vacuole;GO:0005634//nucleus"]
[742,"CSE_CL3718_Contig1","SW_Unigene23330","-","-","+(Strictly)",1089,{"v":0.99,"d":"99.00%"},8,4,4,{"v":0.303177,"d":"0.303"},{"v":0.0921223,"d":"0.0921"},"gi|225442309|ref|XP_002280297.1|","PREDICTED: putative oxidoreductase GLYR1-like [Vitis vinifera]","gi|470135700|ref|XM_004303600.1|","PREDICTED: Fragaria vesca subsp. vesca glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like (LOC101309364), mRNA","sp|F4I907|GLYR2_ARATH","Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana GN=GLYR2 PE=1 SV=1","COG2084","3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases","K00020","olu:OSTLU_45774","3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]","GO:0006098//pentose-phosphate shunt;GO:0006573//valine metabolic process","GO:0008442//3-hydroxyisobutyrate dehydrogenase activity;GO:0030267//glyoxylate reductase (NADP) activity;GO:0008679//2-hydroxy-3-oxopropionate reductase activity;GO:0000166//nucleotide binding;GO:0004616//phosphogluconate dehydrogenase (decarboxylating) activity;GO:0050662//coenzyme binding","GO:0005739//mitochondrion;GO:0009570//chloroplast stroma"]
[743,"CSE_Unigene17388","SW_Unigene8827","-","-","+(Strictly)",2055,{"v":0.993,"d":"99.30%"},15,4,11,{"v":0.860328,"d":"0.860"},{"v":0.748236,"d":"0.7482"},"gi|359484702|ref|XP_002265219.2|","PREDICTED: uncharacterized protein LOC100260114 [Vitis vinifera]","gi|359484701|ref|XM_002265183.2|","PREDICTED: Vitis vinifera uncharacterized LOC100260114 (LOC100260114), mRNA","sp|Q6K687|C3H18_ORYSJ","Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa subsp. japonica GN=Os02g0793000 PE=2 SV=1","-","-","K13103","cre:CHLREDRAFT_108447","tuftelin-interacting protein 11","-","-","-"]
[744,"CSE_Unigene12645","SW_CL1582_Contig6","-","-","+(Strictly)",831,{"v":0.983,"d":"98.30%"},14,8,6,{"v":0.24773,"d":"0.248"},{"v":0.0105137,"d":"0.0105"},"gi|147803042|emb|CAN68367.1|","hypothetical protein VITISV_018178 [Vitis vinifera]","gi|225447437|ref|XM_002266107.1|","PREDICTED: Vitis vinifera probable E3 ubiquitin-protein ligase HERC2-like (LOC100247779), mRNA","sp|Q9FN03|UVR8_ARATH","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1","COG5184","Alpha-tubulin suppressor and related RCC1 domain-containing proteins","K11493","ota:Ot03g05690","regulator of chromosome condensation","-","-","GO:0005794//Golgi apparatus"]
[745,"CSE_Unigene1779","SW_Unigene12207","-","-","+(Strictly)",762,{"v":0.983,"d":"98.30%"},13,10,3,{"v":0.123523,"d":"0.124"},{"v":0.000564256,"d":"0.0006"},"gi|297736221|emb|CBI24859.3|","unnamed protein product [Vitis vinifera]","gi|147771035|emb|AM426893.2|","Vitis vinifera contig VV78X229083.12, whole genome shotgun sequence","-","-","COG0219","Predicted rRNA methylase (SpoU class)","K03216","smo:SELMODRAFT_47811","tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]","GO:0001510//RNA methylation;GO:0006396//RNA processing;GO:0016114//terpenoid biosynthetic process;GO:0006995//cellular response to nitrogen starvation","GO:0008173//RNA methyltransferase activity;GO:0003723//RNA binding;GO:0003677//DNA binding;GO:0046983//protein dimerization activity;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[746,"CSE_Unigene18779","SW_Unigene14077","-","-","+(Strictly)",1947,{"v":0.994,"d":"99.40%"},12,7,5,{"v":0.259611,"d":"0.260"},{"v":0.020722,"d":"0.0207"},"gi|296090376|emb|CBI40195.3|","unnamed protein product [Vitis vinifera]","gi|359486891|ref|XM_002262746.2|","PREDICTED: Vitis vinifera dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like (LOC100243846), mRNA","sp|Q0WQF7|OPD21_ARATH","Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2","COG0508","Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes","K00627","vvi:100243846","pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]","GO:0009749//response to glucose stimulus;GO:0009744//response to sucrose stimulus;GO:0009750//response to fructose stimulus;GO:0006090//pyruvate metabolic process;GO:0010359//regulation of anion channel activity","GO:0004742//dihydrolipoyllysine-residue acetyltransferase activity;GO:0005524//ATP binding;GO:0004149//dihydrolipoyllysine-residue succinyltransferase activity","GO:0005739//mitochondrion;GO:0045254//pyruvate dehydrogenase complex"]
[747,"CSE_Unigene362","SW_Unigene1819","-","-","+(Strictly)",1344,{"v":0.993,"d":"99.30%"},9,4,5,{"v":0.407113,"d":"0.407"},{"v":0.159327,"d":"0.1593"},"gi|359488915|ref|XP_002278099.2|","PREDICTED: protease Do-like 8, chloroplastic-like [Vitis vinifera] >gi|296082900|emb|CBI22201.3| unnamed protein product [Vitis vinifera]","gi|359488914|ref|XM_002278063.2|","PREDICTED: Vitis vinifera protease Do-like 8, chloroplastic-like (LOC100249197), mRNA","sp|Q9LU10|DEGP8_ARATH","Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1","COG0265","Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain","K01362","aly:ARALYDRAFT_494007","[EC:3.4.21.-]","GO:0055114//oxidation-reduction process;GO:0010027//thylakoid membrane organization;GO:0006508//proteolysis;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0010206//photosystem II repair;GO:0019761//glucosinolate biosynthetic process","GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0004252//serine-type endopeptidase activity","GO:0009543//chloroplast thylakoid lumen"]
[748,"CSE_CL4293_Contig2","SW_CL155_Contig1","-","-","+(Strictly)",2793,{"v":0.992,"d":"99.20%"},23,11,12,{"v":0.342968,"d":"0.343"},{"v":0.0108753,"d":"0.0109"},"gi|225453199|ref|XP_002275277.1|","PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis vinifera]","gi|225453198|ref|XM_002275241.1|","PREDICTED: Vitis vinifera DNA repair protein complementing XP-C cells-like (LOC100265647), mRNA","sp|Q7F0R1|PNG1_ORYSJ","Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Oryza sativa subsp. japonica GN=PNG1 PE=2 SV=1","COG5535","DNA repair protein RAD4","K10838","vvi:100265647","xeroderma pigmentosum group C-complementing protein","-","GO:0003677//DNA binding","GO:0009507//chloroplast"]
[749,"CSE_Unigene13200","SW_Unigene8843","-","-","+(Strictly)",879,{"v":0.991,"d":"99.10%"},8,4,4,{"v":0.30581,"d":"0.306"},{"v":0.0942156,"d":"0.0942"},"gi|225458539|ref|XP_002282356.1|","PREDICTED: probable inactive heme oxygenase 2, chloroplastic [Vitis vinifera] >gi|302142360|emb|CBI19563.3| unnamed protein product [Vitis vinifera]","gi|359492058|ref|XM_002282320.2|","PREDICTED: Vitis vinifera probable inactive heme oxygenase 2, chloroplastic-like (LOC100262471), mRNA","sp|O48722|HMOX2_ARATH","Probable inactive heme oxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=HO2 PE=1 SV=2","-","-","K00510","pop:POPTR_779760","heme oxygenase [EC:1.14.99.3]","GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0010024//phytochromobilin biosynthetic process;GO:0006788//heme oxidation","GO:0004392//heme oxygenase (decyclizing) activity;GO:0020037//heme binding","GO:0009507//chloroplast"]
[750,"CSE_Unigene12341","SW_Unigene6307","-","-","+(Strictly)",1242,{"v":0.996,"d":"99.60%"},5,5,"NA",{"v":0,"d":"0.000"},"NA","gi|225462225|ref|XP_002271727.1|","PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Vitis vinifera]","gi|359494474|ref|XM_002271691.2|","PREDICTED: Vitis vinifera DNA repair protein recA homolog 1, chloroplastic-like (LOC100249133), mRNA","sp|Q39199|RECAC_ARATH","DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1","COG0468","RecA/RadA recombinase","K03553","vvi:100249133","recombination protein RecA","GO:0006281//DNA repair;GO:0009432//SOS response;GO:0007131//reciprocal meiotic recombination;GO:0009691//cytokinin biosynthetic process","GO:0005388//calcium-transporting ATPase activity;GO:0005524//ATP binding;GO:0003697//single-stranded DNA binding;GO:0008094//DNA-dependent ATPase activity","GO:0009536//plastid"]
[751,"CSE_CL1086_Contig2","SW_CL903_Contig2","+","-","-",909,{"v":0.986,"d":"98.60%"},13,5,8,{"v":0.529315,"d":"0.529"},{"v":0.307211,"d":"0.3072"},"gi|225452674|ref|XP_002276735.1|","PREDICTED: uncharacterized protein ytfP [Vitis vinifera] >gi|296087775|emb|CBI35031.3| unnamed protein product [Vitis vinifera]","gi|225452673|ref|XM_002276699.1|","PREDICTED: Vitis vinifera uncharacterized LOC100264605 (LOC100264605), mRNA","-","-","COG2081","Predicted flavoproteins","K07007","vvi:100264605",null,"GO:0042744//hydrogen peroxide catabolic process;GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity;GO:0009055//electron carrier activity","-"]
[752,"CSE_CL1452_Contig2","SW_CL5218_Contig2","+","-","-",714,{"v":0.99,"d":"99.00%"},7,3,4,{"v":0.511408,"d":"0.511"},{"v":0.30343,"d":"0.3034"},"gi|225431332|ref|XP_002277720.1|","PREDICTED: methyltransferase-like protein 23 [Vitis vinifera] >gi|296084695|emb|CBI25837.3| unnamed protein product [Vitis vinifera]","gi|359496960|ref|XM_002277684.2|","PREDICTED: Vitis vinifera methyltransferase-like protein 23 (LOC100262571), mRNA","-","-","-","-","-","-","-","-","-","-"]
[753,"CSE_CL1748_Contig1","SW_CL1363_Contig2","+","-","-",540,{"v":0.993,"d":"99.30%"},4,1,3,{"v":0.858572,"d":"0.859"},{"v":0.633605,"d":"0.6336"},"gi|225457592|ref|XP_002273352.1|","PREDICTED: protein canopy homolog 1 [Vitis vinifera] >gi|297745574|emb|CBI40739.3| unnamed protein product [Vitis vinifera]","gi|359491851|ref|XM_002273316.2|","PREDICTED: Vitis vinifera protein canopy homolog 1-like (LOC100242718), mRNA","-","-","-","-","-","-","-","GO:0009627//systemic acquired resistance;GO:0034976//response to endoplasmic reticulum stress","-","-"]
[754,"CSE_CL1818_Contig1","SW_CL1151_Contig1","+","-","-",681,{"v":0.936,"d":"93.60%"},38,20,18,{"v":0.361583,"d":"0.362"},{"v":0.0015516,"d":"0.0016"},"gi|225461997|ref|XP_002272453.1|","PREDICTED: protein CWC15 homolog A isoform 2 [Vitis vinifera] >gi|296089964|emb|CBI39783.3| unnamed protein product [Vitis vinifera]","gi|359494219|ref|XM_002272417.2|","PREDICTED: Vitis vinifera protein CWC15 homolog A-like, transcript variant 2 (LOC100260003), mRNA","sp|Q06R68|YCF2_JASNU","Protein ycf2 OS=Jasminum nudiflorum GN=ycf2-A PE=3 SV=1","-","-","K12863","vvi:100260003","protein CWC15","GO:0000398//mRNA splicing, via spliceosome","-","GO:0005681//spliceosomal complex"]
[755,"CSE_CL1948_Contig1","SW_CL7810_Contig3","+","-","-",660,{"v":0.97,"d":"97.00%"},8,5,3,{"v":0.222809,"d":"0.223"},{"v":0.0391064,"d":"0.0391"},"gi|225423674|ref|XP_002276516.1|","PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic [Vitis vinifera] >gi|297737981|emb|CBI27182.3| unnamed protein product [Vitis vinifera]","gi|225423673|ref|XM_002276480.1|","PREDICTED: Vitis vinifera probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic-like (LOC100262776), mRNA","sp|O81864|FK171_ARATH","Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1","COG0545","FKBP-type peptidyl-prolyl cis-trans isomerases 1","K14826","bdi:100822395","FK506-binding nuclear protein [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization","GO:0005528//FK506 binding;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0009543//chloroplast thylakoid lumen;GO:0016020//membrane"]
[756,"CSE_CL202_Contig1","SW_CL4120_Contig3","+","-","-",1173,{"v":0.992,"d":"99.20%"},6,2,4,{"v":0.557884,"d":"0.558"},{"v":0.389991,"d":"0.3900"},"gi|359476823|ref|XP_003631893.1|","PREDICTED: uncharacterized protein LOC100267747 [Vitis vinifera]","gi|359476822|ref|XM_003631845.1|","PREDICTED: Vitis vinifera uncharacterized LOC100267747 (LOC100267747), mRNA","-","-","COG0144","tRNA and rRNA cytosine-C5-methylases","K15335","ota:Ot04g00960","tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]","GO:0048573//photoperiodism, flowering;GO:0032259//methylation;GO:0006487//protein N-linked glycosylation","GO:0008168//methyltransferase activity","GO:0005737//cytoplasm"]
[757,"CSE_CL2403_Contig1","SW_CL2432_Contig2","+","-","-",900,{"v":0.994,"d":"99.40%"},5,3,2,{"v":0.210934,"d":"0.211"},{"v":0.0938222,"d":"0.0938"},"gi|462401296|gb|EMJ06853.1|","hypothetical protein PRUPE_ppa009363mg [Prunus persica]","gi|349716036|emb|FQ392043.1|","Vitis vinifera clone SS0AFA7YM11","-","-","COG4395","Uncharacterized protein conserved in bacteria","-","-","-","GO:0006886//intracellular protein transport","GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity","GO:0005744//mitochondrial inner membrane presequence translocase complex"]
[758,"CSE_CL2413_Contig1","SW_CL1600_Contig3","+","-","-",792,{"v":0.587,"d":"58.70%"},17,{"v":7.82424,"d":"8"},{"v":9.17576,"d":"9"},{"v":0.277288,"d":"0.277"},{"v":0.00875393,"d":"0.0088"},"gi|225439191|ref|XP_002269447.1|","PREDICTED: uncharacterized protein LOC100253507 [Vitis vinifera] >gi|296085892|emb|CBI31216.3| unnamed protein product [Vitis vinifera]","gi|225439190|ref|XM_002269411.1|","PREDICTED: Vitis vinifera uncharacterized LOC100253507 (LOC100253507), mRNA","-","-","COG0750","Predicted membrane-associated Zn-dependent proteases 1","-","-","-","GO:0009416//response to light stimulus;GO:0010027//thylakoid membrane organization;GO:0006508//proteolysis;GO:0009658//chloroplast organization;GO:0009959//negative gravitropism;GO:0010207//photosystem II assembly;GO:0009723//response to ethylene stimulus;GO:0043157//response to cation stress;GO:0048564//photosystem I assembly;GO:0060359//response to ammonium ion","GO:0004222//metalloendopeptidase activity","GO:0009507//chloroplast;GO:0016020//membrane"]
[759,"CSE_CL2806_Contig2","SW_CL1014_Contig1","+","-","-",939,{"v":0.996,"d":"99.60%"},4,3,1,{"v":0.123507,"d":"0.124"},{"v":0.0581384,"d":"0.0581"},"gi|225428564|ref|XP_002281077.1|","PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis vinifera] >gi|297741415|emb|CBI32546.3| unnamed protein product [Vitis vinifera]","gi|225428563|ref|XM_002281041.1|","PREDICTED: Vitis vinifera cytochrome c biogenesis protein CCS1, chloroplastic-like (LOC100265915), mRNA","sp|Q9XIA4|CCS1_ARATH","Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana GN=CCS1 PE=2 SV=1","COG1333","ResB protein required for cytochrome c biosynthesis","K07399","vvi:100265915","cytochrome c biogenesis protein","GO:0016117//carotenoid biosynthetic process;GO:0006655//phosphatidylglycerol biosynthetic process;GO:0043085//positive regulation of catalytic activity;GO:0019252//starch biosynthetic process;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0000023//maltose metabolic process;GO:0016556//mRNA modification;GO:0009965//leaf morphogenesis;GO:0030154//cell differentiation;GO:0017004//cytochrome complex assembly;GO:0010027//thylakoid membrane organization","-","GO:0016021//integral to membrane;GO:0009535//chloroplast thylakoid membrane"]
[760,"CSE_CL2966_Contig1","SW_CL1824_Contig2","+","-","-",384,{"v":0.995,"d":"99.50%"},2,1,1,{"v":0.23747,"d":"0.237"},{"v":0.312207,"d":"0.3122"},"gi|147854262|emb|CAN81311.1|","hypothetical protein VITISV_016403 [Vitis vinifera]","gi|359489270|ref|XM_002274195.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265039 (LOC100265039), mRNA","-","-","COG5297","Cellobiohydrolase A (1,4-beta-cellobiosidase A)","K14306","vvi:100265039","nuclear pore complex protein Nup62","-","GO:0005515//protein binding;GO:0017056//structural constituent of nuclear pore","GO:0005829//cytosol;GO:0005643//nuclear pore"]
[761,"CSE_CL3180_Contig1","SW_CL5725_Contig2","+","-","-",1212,{"v":0.99,"d":"99.00%"},12,8,4,{"v":0.143528,"d":"0.144"},{"v":0.00133098,"d":"0.0013"},"gi|296082598|emb|CBI21603.3|","unnamed protein product [Vitis vinifera]","gi|359466800|gb|JN252255.1|","Vitis vinifera sirtuin 2 (SRT2) mRNA, complete cds","sp|Q94AQ6|SIR4_ARATH","NAD-dependent protein deacetylase SRT2 OS=Arabidopsis thaliana GN=SRT2 PE=2 SV=1","COG0846","NAD-dependent protein deacetylases, SIR2 family","K11414","vvi:100242368","NAD-dependent deacetylase sirtuin 4 [EC:3.5.1.-]","GO:0006476//protein deacetylation;GO:0031348//negative regulation of defense response;GO:0042742//defense response to bacterium;GO:0006342//chromatin silencing","GO:0008270//zinc ion binding;GO:0070403//NAD+ binding;GO:0003677//DNA binding","GO:0005677//chromatin silencing complex;GO:0005737//cytoplasm"]
[762,"CSE_CL3243_Contig1","SW_CL2662_Contig2","+","-","-",603,{"v":0.987,"d":"98.70%"},8,5,3,{"v":0.241889,"d":"0.242"},{"v":0.0495594,"d":"0.0496"},"gi|296090377|emb|CBI40196.3|","unnamed protein product [Vitis vinifera]","gi|359486923|ref|XM_002262772.2|","PREDICTED: Vitis vinifera uncharacterized LOC100266166 (LOC100266166), mRNA","-","-","COG2833","Uncharacterized protein conserved in bacteria","-","-","-","GO:0055114//oxidation-reduction process","GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity","GO:0005634//nucleus"]
[763,"CSE_CL3463_Contig1","SW_Unigene22407","+","-","-",1971,{"v":0.99,"d":"99.00%"},19,15,4,{"v":0.0699113,"d":"0.070"},{"v":1.04913e-07,"d":"0.0000"},"gi|225458291|ref|XP_002281468.1|","PREDICTED: tRNA wybutosine-synthesizing protein 1 homolog [Vitis vinifera]","gi|359492678|ref|XM_002281432.2|","PREDICTED: Vitis vinifera tRNA wybutosine-synthesizing protein 1 homolog-like (LOC100255870), mRNA","sp|Q8RXN5|TYW1_ARATH","tRNA wybutosine-synthesizing protein 1 homolog OS=Arabidopsis thaliana GN=TYW1 PE=2 SV=1","COG0731","Fe-S oxidoreductases","K15449","vvi:100255870","tRNA wybutosine-synthesizing protein 1","GO:0055114//oxidation-reduction process","GO:0051536//iron-sulfur cluster binding;GO:0003958//NADPH-hemoprotein reductase activity;GO:0005506//iron ion binding;GO:0010181//FMN binding","GO:0005739//mitochondrion"]
[764,"CSE_CL3472_Contig1","SW_Unigene17683","+","-","-",630,{"v":0.994,"d":"99.40%"},4,2,2,{"v":0.340815,"d":"0.341"},{"v":0.266159,"d":"0.2662"},"gi|225429878|ref|XP_002281010.1|","PREDICTED: endonuclease V-like [Vitis vinifera]","gi|225429877|ref|XM_002280974.1|","PREDICTED: Vitis vinifera endonuclease V-like (LOC100249201), mRNA","-","-","COG1515","Deoxyinosine 3'endonuclease (endonuclease V)","K05982","ath:AT4G31150","deoxyribonuclease V [EC:3.1.21.7]","GO:0006281//DNA repair","GO:0043737","GO:0005737//cytoplasm"]
[765,"CSE_CL36_Contig3","SW_Unigene474","+","-","-",807,{"v":0.982,"d":"98.20%"},9,6,3,{"v":0.179763,"d":"0.180"},{"v":0.0137198,"d":"0.0137"},"gi|225454571|ref|XP_002263420.1|","PREDICTED: methyltransferase-like protein 21A [Vitis vinifera] >gi|297737205|emb|CBI26406.3| unnamed protein product [Vitis vinifera]","gi|225454570|ref|XM_002263384.1|","PREDICTED: Vitis vinifera methyltransferase-like protein 21A (LOC100259741), mRNA","-","-","COG0500","SAM-dependent methyltransferases","-","-","-","-","-","GO:0005737//cytoplasm"]
[766,"CSE_CL3896_Contig2","SW_Unigene565","+","-","-",567,{"v":0.984,"d":"98.40%"},9,3,6,{"v":0.644191,"d":"0.644"},{"v":0.384941,"d":"0.3849"},"gi|296090277|emb|CBI40096.3|","unnamed protein product [Vitis vinifera]","gi|359484966|ref|XM_003633143.1|","PREDICTED: Vitis vinifera tRNA-specific adenosine deaminase 2-like (LOC100855243), mRNA","sp|Q9S7I0|TADA_ARATH","tRNA-specific adenosine deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 SV=1","COG0590","Cytosine/adenosine deaminases","K15441","rcu:RCOM_1056370","tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]","GO:0009793//embryo development ending in seed dormancy;GO:0008152//metabolic process","GO:0016787//hydrolase activity;GO:0008270//zinc ion binding","GO:0009507//chloroplast"]
[767,"CSE_CL4253_Contig1","SW_CL8326_Contig2","+","-","-",339,{"v":0.994,"d":"99.40%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225463791|ref|XP_002269925.1|","PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Vitis vinifera] >gi|147853097|emb|CAN78563.1| hypothetical protein VITISV_010402 [Vitis vinifera] >gi|297742718|emb|CBI35352.3| unnamed protein product [Vitis vinifera]","gi|359484135|ref|XM_002269889.2|","PREDICTED: Vitis vinifera mitochondrial intermembrane space import and assembly protein 40-like (LOC100249047), mRNA","-","-","-","-","-","-","-","GO:0006626//protein targeting to mitochondrion;GO:0006625//protein targeting to peroxisome","-","GO:0005777//peroxisome;GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[768,"CSE_CL4421_Contig4","SW_CL3061_Contig6","+","-","-",774,{"v":0.988,"d":"98.80%"},9,3,6,{"v":0.63268,"d":"0.633"},{"v":0.374808,"d":"0.3748"},"gi|359491329|ref|XP_003634267.1|","PREDICTED: SEC14 cytosolic factor-like [Vitis vinifera] >gi|297733742|emb|CBI14989.3| unnamed protein product [Vitis vinifera]","gi|359491328|ref|XM_003634219.1|","PREDICTED: Vitis vinifera SEC14 cytosolic factor-like (LOC100263783), mRNA","sp|Q9SCU1|PATL6_ARATH","Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1","-","-","-","-","-","GO:0006810//transport","GO:0005215//transporter activity","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[769,"CSE_CL4714_Contig2","SW_CL1100_Contig1","+","-","-",393,{"v":0.995,"d":"99.50%"},2,1,1,{"v":0.324327,"d":"0.324"},{"v":0.371678,"d":"0.3717"},"gi|302141868|emb|CBI19071.3|","unnamed protein product [Vitis vinifera]","gi|225459466|ref|XM_002284350.1|","PREDICTED: Vitis vinifera histone-lysine N-methyltransferase ASHR1-like (LOC100267791), mRNA","sp|Q7XJS0|ASHR1_ARATH","Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2","COG2940","Proteins containing SET domain","K11426","vvi:100267791","SET and MYND domain-containing protein","-","GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[770,"CSE_CL5211_Contig1","SW_Unigene8544","+","-","-",492,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.167915,"d":"0.168"},{"v":0.143214,"d":"0.1432"},"gi|225454591|ref|XP_002264335.1|","PREDICTED: bolA-like protein 1 [Vitis vinifera]","gi|225454590|ref|XM_002264299.1|","PREDICTED: Vitis vinifera bolA-like protein 1 (LOC100251009), mRNA","sp|Q84W65|SUFE_ARATH","SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374 PE=1 SV=2","COG5007","Predicted transcriptional regulator, BolA superfamily","K05527","olu:OSTLU_29161","BolA protein","GO:0019243//methylglyoxal catabolic process to D-lactate","-","GO:0009507//chloroplast"]
[771,"CSE_CL619_Contig1","SW_CL4458_Contig2","+","-","-",945,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.345369,"d":"0.345"},{"v":0.269864,"d":"0.2699"},"gi|225440914|ref|XP_002282860.1|","PREDICTED: CAAX prenyl protease 2 [Vitis vinifera] >gi|297740101|emb|CBI30283.3| unnamed protein product [Vitis vinifera]","gi|359481582|ref|XM_002282824.2|","PREDICTED: Vitis vinifera CAAX prenyl protease 2-like (LOC100247667), mRNA","sp|Q8GW19|FACE2_ARATH","CAAX prenyl protease 2 OS=Arabidopsis thaliana GN=FACE2 PE=2 SV=2","-","-","K08658","vvi:100247667","prenyl protein peptidase [EC:3.4.22.-]","GO:0016485//protein processing;GO:0006508//proteolysis;GO:0080120//CAAX-box protein maturation;GO:0034613//cellular protein localization","GO:0004175//endopeptidase activity","GO:0005576//extracellular region;GO:0016020//membrane;GO:0005783//endoplasmic reticulum"]
[772,"CSE_CL6992_Contig1","SW_Unigene8409","+","-","-",2118,{"v":0.994,"d":"99.40%"},12,6,6,{"v":0.347909,"d":"0.348"},{"v":0.0172526,"d":"0.0173"},"gi|225442541|ref|XP_002284183.1|","PREDICTED: VHS domain-containing protein At3g16270 [Vitis vinifera] >gi|297743233|emb|CBI36100.3| unnamed protein product [Vitis vinifera]","gi|225442540|ref|XM_002284147.1|","PREDICTED: Vitis vinifera VHS domain-containing protein At3g16270-like (LOC100246260), mRNA","sp|Q9C5H4|Y3627_ARATH","VHS domain-containing protein At3g16270 OS=Arabidopsis thaliana GN=At3g16270 PE=1 SV=1","-","-","-","-","-","GO:0006623//protein targeting to vacuole;GO:0048193//Golgi vesicle transport;GO:0000902//cell morphogenesis;GO:0016049//cell growth","-","GO:0016020//membrane;GO:0005634//nucleus"]
[773,"CSE_CL7593_Contig2","SW_CL4135_Contig2","+","-","-",1566,{"v":0.997,"d":"99.70%"},5,4,1,{"v":0.0701438,"d":"0.070"},{"v":0.00908494,"d":"0.0091"},"gi|225456767|ref|XP_002276501.1|","PREDICTED: kelch domain-containing protein 4 [Vitis vinifera] >gi|297733624|emb|CBI14871.3| unnamed protein product [Vitis vinifera]","gi|225456766|ref|XM_002276465.1|","PREDICTED: Vitis vinifera kelch domain-containing protein 4-like (LOC100256953), mRNA","sp|O49326|NSP2_ARATH","Nitrile-specifier protein 2 OS=Arabidopsis thaliana GN=NSP2 PE=2 SV=1","-","-","K15450","vvi:100257307","tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.-]","GO:0006869//lipid transport","-","GO:0005737//cytoplasm"]
[774,"CSE_CL7596_Contig1","SW_Unigene17530","+","-","-",1311,{"v":0.996,"d":"99.60%"},5,3,2,{"v":0.230005,"d":"0.230"},{"v":0.110106,"d":"0.1101"},"gi|359495988|ref|XP_002266091.2|","PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine decarboxylase proenzyme 1, mitochondrial-like [Vitis vinifera]","gi|359495987|ref|XM_002266055.2|","PREDICTED: Vitis vinifera phosphatidylserine decarboxylase proenzyme 1, mitochondrial-like (LOC100259711), mRNA","-","-","COG0688","Phosphatidylserine decarboxylase","K01613","gmx:100811372","phosphatidylserine decarboxylase [EC:4.1.1.65]","GO:0008654//phospholipid biosynthetic process","GO:0004609//phosphatidylserine decarboxylase activity","GO:0005739//mitochondrion"]
[775,"CSE_CL7890_Contig3","SW_CL6883_Contig1","+","-","-",1080,{"v":0.997,"d":"99.70%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225430786|ref|XP_002270129.1|","PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis vinifera]","gi|359476708|ref|XM_002270093.2|","PREDICTED: Vitis vinifera U1 small nuclear ribonucleoprotein 70 kDa-like (LOC100244445), mRNA","sp|Q42404|RU17_ARATH","U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 PE=1 SV=1","COG0724","RNA-binding proteins (RRM domain)","K11093","vvi:100244445","U1 small nuclear ribonucleoprotein 70kDa","GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0000398//mRNA splicing, via spliceosome;GO:0043687//post-translational protein modification;GO:0030422//production of siRNA involved in RNA interference;GO:0045893//positive regulation of transcription, DNA-dependent","GO:0003723//RNA binding;GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0030529//ribonucleoprotein complex;GO:0005634//nucleus"]
[776,"CSE_CL908_Contig1","SW_Unigene8783","+","-","-",1365,{"v":0.995,"d":"99.50%"},7,"NA",7,"NA","NA","gi|225437398|ref|XP_002270248.1|","PREDICTED: blue-light photoreceptor PHR2 [Vitis vinifera]","gi|359479897|ref|XM_002270212.2|","PREDICTED: Vitis vinifera blue-light photoreceptor PHR2-like (LOC100253809), mRNA","sp|Q8LB72|PHR2_ARATH","Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2","COG0415","Deoxyribodipyrimidine photolyase","K01669","ppp:PHYPADRAFT_200971","deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]","GO:0006655//phosphatidylglycerol biosynthetic process;GO:0006281//DNA repair;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0016117//carotenoid biosynthetic process;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process","GO:0003904//deoxyribodipyrimidine photo-lyase activity","GO:0005634//nucleus"]
[777,"CSE_CL967_Contig2","SW_Unigene8576","+","-","-",381,{"v":0.979,"d":"97.90%"},8,3,5,{"v":0.710867,"d":"0.711"},{"v":0.64489,"d":"0.6449"},"gi|225431557|ref|XP_002282176.1|","PREDICTED: UPF0235 protein C15orf40 homolog [Vitis vinifera] >gi|147866968|emb|CAN83055.1| hypothetical protein VITISV_009894 [Vitis vinifera]","gi|225431556|ref|XM_002282140.1|","PREDICTED: Vitis vinifera uncharacterized LOC100259033 (LOC100259033), mRNA","-","-","COG1872","Uncharacterized conserved protein","K09131","vvi:100259033","hypothetical protein","-","-","GO:0005634//nucleus"]
[778,"CSE_Unigene10451","SW_CL2743_Contig1","+","-","-",474,{"v":0.996,"d":"99.60%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|147857570|emb|CAN83082.1|","hypothetical protein VITISV_001330 [Vitis vinifera] >gi|297736088|emb|CBI24126.3| unnamed protein product [Vitis vinifera]","gi|470115332|ref|XM_004293809.1|","PREDICTED: Fragaria vesca subsp. vesca UPF0678 fatty acid-binding protein-like protein At1g79260-like (LOC101292673), mRNA","sp|O64527|Y1926_ARATH","UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1","-","-","-","-","-","-","-","GO:0005829//cytosol;GO:0009507//chloroplast"]
[779,"CSE_Unigene10784","SW_Unigene14807","+","-","-",873,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|359476157|ref|XP_002282976.2|","PREDICTED: aberrant root formation protein 4-like [Vitis vinifera]","gi|359476156|ref|XM_002282940.2|","PREDICTED: Vitis vinifera aberrant root formation protein 4-like (LOC100264691), mRNA","sp|Q84VX3|ALF4_ARATH","Aberrant root formation protein 4 OS=Arabidopsis thaliana GN=ALF4 PE=1 SV=2","-","-","-","-","-","-","GO:0005515//protein binding","GO:0005634//nucleus;GO:0005829//cytosol"]
[780,"CSE_Unigene10828","SW_CL5589_Contig1","+","-","-",366,{"v":0.992,"d":"99.20%"},3,1,2,{"v":0.742851,"d":"0.743"},{"v":0.594492,"d":"0.5945"},"gi|225423668|ref|XP_002276335.1|","PREDICTED: BEACH domain-containing protein lvsE [Vitis vinifera] >gi|297737984|emb|CBI27185.3| unnamed protein product [Vitis vinifera]","gi|359473063|ref|XM_002276299.2|","PREDICTED: Vitis vinifera BEACH domain-containing protein lvsE-like (LOC100245605), mRNA","sp|Q8GY89|SRX_ARATH","Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SRX PE=1 SV=1","COG5119","Uncharacterized protein, contains ParB-like nuclease domain","-","-","-","GO:0055114//oxidation-reduction process;GO:0006979//response to oxidative stress","GO:0032542//sulfiredoxin activity;GO:0003677//DNA binding","GO:0005739//mitochondrion;GO:0009507//chloroplast"]
[781,"CSE_Unigene10998","SW_Unigene13782","+","-","-",723,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.305853,"d":"0.306"},{"v":0.35987,"d":"0.3599"},"gi|359476630|ref|XP_003631869.1|","PREDICTED: uncharacterized protein LOC100261651 [Vitis vinifera]","gi|359476629|ref|XM_003631821.1|","PREDICTED: Vitis vinifera uncharacterized LOC100261651 (LOC100261651), mRNA","-","-","COG1011","Predicted hydrolase (HAD superfamily)","-","-","-","GO:0008152//metabolic process","GO:0008967//phosphoglycolate phosphatase activity","GO:0009507//chloroplast"]
[782,"CSE_Unigene11020","SW_CL6666_Contig1","+","-","-",555,{"v":0.984,"d":"98.40%"},6,2,4,{"v":0.618015,"d":"0.618"},{"v":0.43455,"d":"0.4346"},"gi|470110562|ref|XP_004291549.1|","PREDICTED: tRNA dimethylallyltransferase 2-like [Fragaria vesca subsp. vesca]","gi|359479372|ref|XM_002263711.2|","PREDICTED: Vitis vinifera tRNA dimethylallyltransferase 2-like (LOC100251208), mRNA","sp|Q9ZUX7|IPT2_ARATH","tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2 PE=1 SV=2","COG0324","tRNA delta(2)-isopentenylpyrophosphate transferase","K00791","sbi:SORBI_03g047160","tRNA dimethylallyltransferase [EC:2.5.1.75]","GO:0009691//cytokinin biosynthetic process;GO:0008033//tRNA processing","GO:0005524//ATP binding;GO:0009824//AMP dimethylallyltransferase activity","GO:0005829//cytosol"]
[783,"CSE_Unigene11031","SW_Unigene11602","+","-","-",678,{"v":0.996,"d":"99.60%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|359489199|ref|XP_002275849.2|","PREDICTED: putative Holliday junction resolvase [Vitis vinifera]","gi|123683029|emb|AM450172.1|","Vitis vinifera contig VV78X149975.8, whole genome shotgun sequence","-","-","COG0816","Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)","K07447","vvi:100247884","putative holliday junction resolvase [EC:3.1.-.-]","GO:0006259//DNA metabolic process;GO:0006974//response to DNA damage stimulus","GO:0016787//hydrolase activity","GO:0009507//chloroplast"]
[784,"CSE_Unigene11048","SW_Unigene6954","+","-","-",525,{"v":0.987,"d":"98.70%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225459779|ref|XP_002285907.1|","PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Vitis vinifera] >gi|302141700|emb|CBI18903.3| unnamed protein product [Vitis vinifera]","gi|359493005|ref|XM_002285871.2|","PREDICTED: Vitis vinifera U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like (LOC100255803), mRNA","-","-","-","-","K13153","vvi:100255803","U11/U12 small nuclear ribonucleoprotein 25 kDa protein","GO:0006626//protein targeting to mitochondrion","GO:0003676//nucleic acid binding","GO:0030529//ribonucleoprotein complex;GO:0005634//nucleus"]
[785,"CSE_Unigene11110","SW_CL4480_Contig3","+","-","-",891,{"v":0.983,"d":"98.30%"},12,7,5,{"v":0.305677,"d":"0.306"},{"v":0.0390417,"d":"0.0390"},"gi|225427149|ref|XP_002277302.1|","PREDICTED: cell cycle checkpoint protein RAD1-like [Vitis vinifera]","gi|225427148|ref|XM_002277266.1|","PREDICTED: Vitis vinifera cell cycle checkpoint protein RAD1-like (LOC100255740), mRNA","-","-","-","-","K02830","vvi:100255740","cell cycle checkpoint protein [EC:3.1.11.2]","GO:0006261//DNA-dependent DNA replication;GO:0000077//DNA damage checkpoint;GO:0006281//DNA repair","GO:0008853//exodeoxyribonuclease III activity;GO:0003684//damaged DNA binding","GO:0005634//nucleus"]
[786,"CSE_Unigene11265","SW_Unigene8603","+","-","-",1338,{"v":0.993,"d":"99.30%"},10,5,5,{"v":0.368449,"d":"0.368"},{"v":0.104019,"d":"0.1040"},"gi|147865643|emb|CAN83669.1|","hypothetical protein VITISV_027696 [Vitis vinifera]","gi|123698192|emb|AM474371.1|","Vitis vinifera contig VV78X104112.30, whole genome shotgun sequence","-","-","-","-","-","-","-","-","-","GO:0005576//extracellular region"]
[787,"CSE_Unigene11301","SW_Unigene5441","+","-","-",495,{"v":0.99,"d":"99.00%"},5,"NA",5,"NA","NA","gi|225425898|ref|XP_002266725.1|","PREDICTED: uncharacterized protein LOC100244197 [Vitis vinifera] >gi|297738342|emb|CBI27543.3| unnamed protein product [Vitis vinifera]","gi|225425897|ref|XM_002266689.1|","PREDICTED: Vitis vinifera uncharacterized LOC100244197 (LOC100244197), mRNA","-","-","-","-","-","-","-","-","-","GO:0009508//plastid chromosome;GO:0009507//chloroplast"]
[788,"CSE_Unigene11318","SW_Unigene10252","+","-","-",879,{"v":0.991,"d":"99.10%"},8,2,6,{"v":1.11083,"d":"1.111"},{"v":0.920086,"d":"0.9201"},"gi|225450399|ref|XP_002278276.1|","PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Vitis vinifera]","gi|225450398|ref|XM_002278240.1|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At4g38150-like (LOC100256219), mRNA","sp|Q9SZL5|PP356_ARATH","Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana GN=At4g38150 PE=2 SV=1","-","-","K03457","ath:AT5G03560","nucleobase:cation symporter-1, NCS1 family","GO:0015931//nucleobase-containing compound transport","GO:0015391//nucleobase:cation symporter activity","GO:0009507//chloroplast"]
[789,"CSE_Unigene11343","SW_Unigene25773","+","-","-",798,{"v":0.986,"d":"98.60%"},8,5,3,{"v":0.225737,"d":"0.226"},{"v":0.0403953,"d":"0.0404"},"gi|147774594|emb|CAN65424.1|","hypothetical protein VITISV_024591 [Vitis vinifera]","gi|359485570|ref|XM_002267466.2|","PREDICTED: Vitis vinifera protein IQ-DOMAIN 1-like (LOC100241471), mRNA","sp|Q9SF32|IQD1_ARATH","Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1","-","-","-","-","-","-","-","-"]
[790,"CSE_Unigene11491","SW_Unigene12460","+","-","-",711,{"v":0.996,"d":"99.60%"},3,1,2,{"v":0.5078,"d":"0.508"},{"v":0.485989,"d":"0.4860"},"gi|225438033|ref|XP_002271509.1|","PREDICTED: phospholipid-sterol O-acyltransferase [Vitis vinifera] >gi|297744188|emb|CBI37158.3| unnamed protein product [Vitis vinifera]","gi|225438032|ref|XM_002271473.1|","PREDICTED: Vitis vinifera phospholipid-sterol O-acyltransferase-like (LOC100265301), mRNA","sp|Q4VCM1|LCAT2_ARATH","Phospholipid-sterol O-acyltransferase OS=Arabidopsis thaliana GN=PSAT PE=2 SV=2","-","-","-","-","-","GO:0034434//sterol esterification;GO:0010150//leaf senescence;GO:0016127//sterol catabolic process","GO:0004607//phosphatidylcholine-sterol O-acyltransferase activity;GO:0080095//phosphatidylethanolamine-sterol O-acyltransferase activity;GO:0046027//phospholipid:diacylglycerol acyltransferase activity;GO:0080096//phosphatidate-sterol O-acyltransferase activity","GO:0016023//cytoplasmic membrane-bounded vesicle"]
[791,"CSE_Unigene11506","SW_Unigene1614","+","-","-",360,{"v":0.997,"d":"99.70%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225451862|ref|XP_002282212.1|","PREDICTED: uncharacterized protein LOC100263512 [Vitis vinifera] >gi|147779652|emb|CAN71738.1| hypothetical protein VITISV_011558 [Vitis vinifera] >gi|298204429|emb|CBI16909.3| unnamed protein product [Vitis vinifera]","gi|225451861|ref|XM_002282176.1|","PREDICTED: Vitis vinifera uncharacterized LOC100263512 (LOC100263512), mRNA","sp|F4K657|BL1S2_ARATH","Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis thaliana GN=BLOS2 PE=1 SV=1","-","-","-","-","-","GO:0010048//vernalization response","-","GO:0005634//nucleus"]
[792,"CSE_Unigene11510","SW_Unigene12545","+","-","-",1167,{"v":0.992,"d":"99.20%"},9,5,4,{"v":0.27839,"d":"0.278"},{"v":0.0120086,"d":"0.0120"},"gi|297739777|emb|CBI29959.3|","unnamed protein product [Vitis vinifera]","gi|225441576|ref|XM_002276692.1|","PREDICTED: Vitis vinifera homogentisate phytyltransferase 2, chloroplastic-like (LOC100264108), mRNA","sp|Q1ACB3|HPT2_ARATH","Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis thaliana GN=HPT2 PE=2 SV=1","COG0382","4-hydroxybenzoate polyprenyltransferase and related prenyltransferases","K12501","vvi:100264108","homogentisate solanesyltransferase","GO:0048364//root development;GO:0016117//carotenoid biosynthetic process;GO:0009944//polarity specification of adaxial/abaxial axis;GO:0010189//vitamin E biosynthetic process;GO:0009910//negative regulation of flower development;GO:0009965//leaf morphogenesis;GO:0035281//pre-miRNA export from nucleus;GO:0010236//plastoquinone biosynthetic process","GO:0004161//dimethylallyltranstransferase activity;GO:0005515//protein binding;GO:0010357//homogentisate solanesyltransferase activity;GO:0010356//homogentisate geranylgeranyltransferase activity;GO:0005487//nucleocytoplasmic transporter activity;GO:0010355//homogentisate farnesyltransferase activity","GO:0009941//chloroplast envelope;GO:0016021//integral to membrane;GO:0005635//nuclear envelope;GO:0009535//chloroplast thylakoid membrane;GO:0005739//mitochondrion"]
[793,"CSE_Unigene11541","SW_Unigene25178","+","-","-",996,{"v":0.994,"d":"99.40%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|359495860|ref|XP_002266337.2|","PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like [Vitis vinifera]","gi|359495859|ref|XM_002266301.2|","PREDICTED: Vitis vinifera uncharacterized LOC100259536 (LOC100259536), mRNA","-","-","COG0566","rRNA methylases","K03437","pop:POPTR_1078096","RNA methyltransferase, TrmH family","GO:0006278//RNA-dependent DNA replication;GO:0001510//RNA methylation;GO:0006396//RNA processing","GO:0003964//RNA-directed DNA polymerase activity;GO:0003723//RNA binding;GO:0008173//RNA methyltransferase activity","GO:0009507//chloroplast"]
[794,"CSE_Unigene11551","SW_Unigene22929","+","-","-",1113,{"v":0.995,"d":"99.50%"},6,2,4,{"v":0.767425,"d":"0.767"},{"v":0.529964,"d":"0.5300"},"gi|225461828|ref|XP_002283733.1|","PREDICTED: ribokinase [Vitis vinifera]","gi|359493784|ref|XM_002283697.2|","PREDICTED: Vitis vinifera ribokinase-like (LOC100265800), mRNA","sp|Q6XZ79|SCRK1_MAIZE","Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1","COG0524","Sugar kinases, ribokinase family","K00852","vvi:100265800","ribokinase [EC:2.7.1.15]","GO:0006014//D-ribose metabolic process;GO:0016310//phosphorylation;GO:0055114//oxidation-reduction process","GO:0004747//ribokinase activity;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","GO:0009570//chloroplast stroma"]
[795,"CSE_Unigene11567","SW_Unigene15156","+","-","-",357,{"v":0.992,"d":"99.20%"},3,1,2,{"v":0.604904,"d":"0.605"},{"v":0.537107,"d":"0.5371"},"gi|225429803|ref|XP_002282858.1|","PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]","gi|225429802|ref|XM_002282822.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262900 (LOC100262900), mRNA","-","-","-","-","-","-","-","-","GO:0003676//nucleic acid binding","GO:0030529//ribonucleoprotein complex;GO:0005634//nucleus"]
[796,"CSE_Unigene11672","SW_Unigene21599","+","-","-",384,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225463408|ref|XP_002274043.1|","PREDICTED: programmed cell death protein 5-like [Vitis vinifera]","gi|359483829|ref|XM_002274007.2|","PREDICTED: Vitis vinifera programmed cell death protein 5-like (LOC100245316), mRNA","-","-","COG2118","DNA-binding protein","K06875","vvi:100245316","programmed cell death protein 5","-","GO:0003690//double-stranded DNA binding","GO:0005829//cytosol"]
[797,"CSE_Unigene11740","SW_Unigene21808","+","-","-",399,{"v":0.995,"d":"99.50%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|359483619|ref|XP_002269426.2|","PREDICTED: prefoldin subunit 6-like [Vitis vinifera]","gi|359483618|ref|XM_002269390.2|","PREDICTED: Vitis vinifera prefoldin subunit 6-like (LOC100245160), mRNA","-","-","COG1382","Prefoldin, chaperonin cofactor","K04798","mtr:MTR_5g055650","prefoldin beta subunit","GO:0006457//protein folding;GO:0009651//response to salt stress;GO:0043622//cortical microtubule organization;GO:0006096//glycolysis;GO:0006094//gluconeogenesis;GO:0046686//response to cadmium ion","GO:0051082//unfolded protein binding","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0016272//prefoldin complex;GO:0005886//plasma membrane"]
[798,"CSE_Unigene11915","SW_Unigene22381","+","-","-",600,{"v":0.988,"d":"98.80%"},7,5,2,{"v":0.0957,"d":"0.096"},{"v":0.00412437,"d":"0.0041"},"gi|359481702|ref|XP_003632661.1|","PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Vitis vinifera] >gi|147858745|emb|CAN82905.1| hypothetical protein VITISV_007253 [Vitis vinifera]","gi|359481701|ref|XM_003632613.1|","PREDICTED: Vitis vinifera heme-binding-like protein At3g10130, chloroplastic-like (LOC100853041), mRNA","sp|Q9SR77|HBPL1_ARATH","Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=1 SV=1","COG0455","ATPases involved in chromosome partitioning","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0009744//response to sucrose stimulus;GO:0010224//response to UV-B;GO:0009813//flavonoid biosynthetic process;GO:0010017//red or far-red light signaling pathway","-","GO:0042644//chloroplast nucleoid;GO:0005829//cytosol;GO:0005773//vacuole;GO:0005794//Golgi apparatus;GO:0005634//nucleus;GO:0005886//plasma membrane"]
[799,"CSE_Unigene12011","SW_Unigene1250","+","-","-",459,{"v":0.996,"d":"99.60%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225458428|ref|XP_002283731.1|","PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Vitis vinifera] >gi|302142417|emb|CBI19620.3| unnamed protein product [Vitis vinifera]","gi|359492095|ref|XM_002283695.2|","PREDICTED: Vitis vinifera mediator of RNA polymerase II transcription subunit 18-like (LOC100250557), mRNA","sp|Q9SJZ6|MED18_ARATH","Mediator of RNA polymerase II transcription subunit 18 OS=Arabidopsis thaliana GN=MED18 PE=1 SV=1","-","-","K15135","vvi:100250557","mediator of RNA polymerase II transcription subunit 18","GO:0048442//sepal development;GO:0006357//regulation of transcription from RNA polymerase II promoter;GO:0048440//carpel development;GO:0048510//regulation of timing of transition from vegetative to reproductive phase;GO:0010219//regulation of vernalization response;GO:0048441//petal development;GO:0048443//stamen development;GO:0048833//specification of floral organ number;GO:0045892//negative regulation of transcription, DNA-dependent","GO:0001104//RNA polymerase II transcription cofactor activity","GO:0016592//mediator complex"]
[800,"CSE_Unigene12028","SW_Unigene12675","+","-","-",426,{"v":0.986,"d":"98.60%"},6,2,4,{"v":0.724061,"d":"0.724"},{"v":0.505106,"d":"0.5051"},"gi|225452226|ref|XP_002268368.1|","PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Vitis vinifera] >gi|296081322|emb|CBI17704.3| unnamed protein product [Vitis vinifera]","gi|359488647|ref|XM_002268332.2|","PREDICTED: Vitis vinifera ATP synthase mitochondrial F1 complex assembly factor 2-like (LOC100268057), mRNA","-","-","COG5387","Chaperone required for the assembly of the mitochondrial F1-ATPase","K07556","vvi:100268057","ATP synthase mitochondrial F1 complex assembly factor 2","GO:0043461//proton-transporting ATP synthase complex assembly","-","GO:0005739//mitochondrion"]
[801,"CSE_Unigene12030","SW_Unigene17755","+","-","-",1782,{"v":0.99,"d":"99.00%"},18,{"v":8.80954,"d":"9"},{"v":9.19046,"d":"9"},{"v":0.336734,"d":"0.337"},{"v":0.0170693,"d":"0.0171"},"gi|296090366|emb|CBI40185.3|","unnamed protein product [Vitis vinifera]","gi|359486915|ref|XM_002269942.2|","PREDICTED: Vitis vinifera probable U3 small nucleolar RNA-associated protein 7-like (LOC100241077), mRNA","sp|Q9AV81|PUB72_ORYSJ","U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica GN=PUB72 PE=2 SV=1","COG0086","DNA-directed RNA polymerase, beta' subunit/160 kD subunit","K14768","vvi:100241077","U3 small nucleolar RNA-associated protein 7","GO:0009220//pyrimidine ribonucleotide biosynthetic process","GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0080008//Cul4-RING ubiquitin ligase complex"]
[802,"CSE_Unigene12057","SW_Unigene8479","+","-","-",435,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225452570|ref|XP_002280653.1|","PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Vitis vinifera] >gi|296087725|emb|CBI34981.3| unnamed protein product [Vitis vinifera]","gi|359488745|ref|XM_002280617.2|","PREDICTED: Vitis vinifera ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like (LOC100245804), mRNA","sp|O49856|FTRC_SOYBN","Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max GN=FTRC PE=2 SV=1","COG4802","Ferredoxin-thioredoxin reductase, catalytic subunit","-","-","-","GO:0055114//oxidation-reduction process;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity","GO:0046872//metal ion binding;GO:0008937//ferredoxin-NAD(P) reductase activity;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0030385//ferredoxin:thioredoxin reductase activity","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[803,"CSE_Unigene12110","SW_Unigene21833","+","-","-",651,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225443859|ref|XP_002276421.1|","PREDICTED: calcyclin-binding protein [Vitis vinifera] >gi|297740707|emb|CBI30889.3| unnamed protein product [Vitis vinifera]","gi|359483872|ref|XM_002276385.2|","PREDICTED: Vitis vinifera calcyclin-binding protein-like (LOC100248135), mRNA","-","-","-","-","K04507","vvi:100248135","calcyclin binding protein","GO:0006457//protein folding;GO:0009644//response to high light intensity;GO:0034976//response to endoplasmic reticulum stress;GO:0042542//response to hydrogen peroxide;GO:0009408//response to heat","-","GO:0005886//plasma membrane;GO:0005634//nucleus"]
[804,"CSE_Unigene12118","SW_Unigene22987","+","-","-",963,{"v":0.994,"d":"99.40%"},6,1,5,{"v":2.06977,"d":"2.070"},{"v":0.55185,"d":"0.5519"},"gi|296089043|emb|CBI38746.3|","unnamed protein product [Vitis vinifera]","gi|359489484|ref|XM_002268986.2|","PREDICTED: Vitis vinifera probable inactive purple acid phosphatase 29-like (LOC100264419), mRNA","-","-","COG3752","Predicted membrane protein","-","-","-","GO:0006629//lipid metabolic process","GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors","GO:0016021//integral to membrane;GO:0005737//cytoplasm"]
[805,"CSE_Unigene12173","SW_CL8103_Contig2","+","-","-",393,{"v":0.985,"d":"98.50%"},6,4,2,{"v":0.17007,"d":"0.170"},{"v":0.0406521,"d":"0.0407"},"gi|225427326|ref|XP_002279231.1|","PREDICTED: uncharacterized protein LOC100257452 [Vitis vinifera]","gi|225427325|ref|XM_002279195.1|","PREDICTED: Vitis vinifera uncharacterized LOC100257452 (LOC100257452), mRNA","-","-","-","-","-","-","-","GO:0046786//viral replication complex formation and maintenance","-","-"]
[806,"CSE_Unigene12206","SW_Unigene12489","+","-","-",1506,{"v":0.996,"d":"99.60%"},6,5,1,{"v":0.0730128,"d":"0.073"},{"v":0.00612295,"d":"0.0061"},"gi|296087642|emb|CBI34898.3|","unnamed protein product [Vitis vinifera]","gi|359488831|ref|XM_002273911.2|","PREDICTED: Vitis vinifera gamma-tubulin complex component 2-like (LOC100259303), mRNA","sp|Q9M350|GCP4_ARATH","Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana GN=At3g53760 PE=2 SV=2","-","-","-","-","-","GO:0000226//microtubule cytoskeleton organization","-","GO:0005815//microtubule organizing center;GO:0005634//nucleus;GO:0000922//spindle pole"]
[807,"CSE_Unigene12210","SW_Unigene7516","+","-","-",636,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|225458509|ref|XP_002284218.1|","PREDICTED: uncharacterized protein LOC100255850 [Vitis vinifera]","gi|225458508|ref|XM_002284182.1|","PREDICTED: Vitis vinifera uncharacterized LOC100255850 (LOC100255850), mRNA","sp|Q7Y0D4|TR164_ORYSJ","Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0767500 PE=2 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","-","-","-","GO:0045454//cell redox homeostasis;GO:0010207//photosystem II assembly","-","GO:0009507//chloroplast"]
[808,"CSE_Unigene12572","SW_Unigene7380","+","-","-",537,{"v":0.994,"d":"99.40%"},3,1,2,{"v":0.668894,"d":"0.669"},{"v":0.14122,"d":"0.1412"},"gi|225437969|ref|XP_002271666.1|","PREDICTED: photosystem II reaction center PSB28 protein, chloroplastic [Vitis vinifera] >gi|297744226|emb|CBI37196.3| unnamed protein product [Vitis vinifera]","gi|359480319|ref|XM_002271630.2|","PREDICTED: Vitis vinifera photosystem II reaction center PSB28 protein, chloroplastic-like (LOC100260011), mRNA","sp|Q0JG75|PSB28_ORYSJ","Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2","-","-","K08903","vvi:100260011","photosystem II 13kDa protein","GO:0015979//photosynthesis","-","GO:0009570//chloroplast stroma;GO:0009535//chloroplast thylakoid membrane;GO:0009654//oxygen evolving complex"]
[809,"CSE_Unigene12584","SW_Unigene15931","+","-","-",291,{"v":0.976,"d":"97.60%"},7,3,4,{"v":0.380294,"d":"0.380"},{"v":0.191888,"d":"0.1919"},"gi|225438196|ref|XP_002264013.1|","PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Vitis vinifera] >gi|297745701|emb|CBI41023.3| unnamed protein product [Vitis vinifera]","gi|349716203|emb|FQ397185.1|","Vitis vinifera clone SS0AEB7YJ05","sp|Q9T070|COX6A_ARATH","Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana GN=COX6A PE=2 SV=1","-","-","K02266","vvi:100250749","cytochrome c oxidase subunit 6a","-","GO:0004129//cytochrome-c oxidase activity","GO:0005751//mitochondrial respiratory chain complex IV"]
[810,"CSE_Unigene12591","SW_Unigene22150","+","-","-",363,{"v":0.978,"d":"97.80%"},8,4,4,{"v":0.305223,"d":"0.305"},{"v":0.0948185,"d":"0.0948"},"gi|225434084|ref|XP_002275788.1|","PREDICTED: signal recognition particle 14 kDa protein isoform 1 [Vitis vinifera]","gi|225434083|ref|XM_002275752.1|","PREDICTED: Vitis vinifera signal recognition particle 14 kDa protein-like, transcript variant 1 (LOC100259285), mRNA","sp|O04421|SRP14_ARATH","Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana GN=SRP14 PE=2 SV=2","-","-","K03104","vvi:100259285","signal recognition particle subunit SRP14","GO:0045900//negative regulation of translational elongation;GO:0006614//SRP-dependent cotranslational protein targeting to membrane","GO:0030942//endoplasmic reticulum signal peptide binding;GO:0008312//7S RNA binding","GO:0005786//signal recognition particle, endoplasmic reticulum targeting"]
[811,"CSE_Unigene12719","SW_CL4891_Contig2","+","-","-",1011,{"v":0.997,"d":"99.70%"},3,1,2,{"v":0.644083,"d":"0.644"},{"v":0.553589,"d":"0.5536"},"gi|297740184|emb|CBI30366.3|","unnamed protein product [Vitis vinifera]","gi|359481640|ref|XM_002275482.2|","PREDICTED: Vitis vinifera UPF0554 protein C2orf43 homolog (LOC100261457), mRNA","-","-","-","-","-","-","-","GO:0009086//methionine biosynthetic process;GO:0030003//cellular cation homeostasis;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation","-","GO:0005739//mitochondrion"]
[812,"CSE_Unigene12813","SW_Unigene15557","+","-","-",651,{"v":0.985,"d":"98.50%"},10,8,2,{"v":0.0824221,"d":"0.082"},{"v":2.93035e-05,"d":"0.0000"},"gi|225460849|ref|XP_002277187.1|","PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Vitis vinifera]","gi|225460848|ref|XM_002277151.1|","PREDICTED: Vitis vinifera vacuolar protein sorting-associated protein VTA1 homolog (LOC100253708), mRNA","sp|Q9AUE0|CALS1_ARATH","Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2","-","-","K12199","vvi:100253708","vacuolar protein sorting-associated protein VTA1","GO:0006944//cellular membrane fusion;GO:0016192//vesicle-mediated transport","GO:0005515//protein binding","GO:0005634//nucleus"]
[813,"CSE_Unigene12879","SW_Unigene8367","+","-","-",297,{"v":0.993,"d":"99.30%"},2,1,1,{"v":0.327783,"d":"0.328"},{"v":0.374156,"d":"0.3742"},"gi|225453871|ref|XP_002278537.1|","PREDICTED: ubiquitin-related modifier 1 homolog 2 isoform 1 [Vitis vinifera] >gi|296089135|emb|CBI38838.3| unnamed protein product [Vitis vinifera]","gi|225453870|ref|XM_002278501.1|","PREDICTED: Vitis vinifera ubiquitin-related modifier 1 homolog 2-like, transcript variant 1 (LOC100257432), mRNA","sp|B3H7G2|URM12_ARATH","Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana GN=URM1-2 PE=3 SV=1","COG5131","Ubiquitin-like protein","K12161","vvi:100257432","ubiquitin related modifier 1","GO:0034227//tRNA thio-modification","-","GO:0005737//cytoplasm"]
[814,"CSE_Unigene12963","SW_CL3732_Contig2","+","-","-",831,{"v":0.988,"d":"98.80%"},10,4,6,{"v":0.510618,"d":"0.511"},{"v":0.236435,"d":"0.2364"},"gi|225440492|ref|XP_002273489.1|","PREDICTED: uracil phosphoribosyltransferase [Vitis vinifera] >gi|297740307|emb|CBI30489.3| unnamed protein product [Vitis vinifera]","gi|359481736|ref|XM_002273453.2|","PREDICTED: Vitis vinifera uracil phosphoribosyltransferase-like (LOC100261300), mRNA","sp|P93394|UPP_TOBAC","Uracil phosphoribosyltransferase OS=Nicotiana tabacum GN=UPP PE=2 SV=1","COG0035","Uracil phosphoribosyltransferase","K00761","vvi:100261300","uracil phosphoribosyltransferase [EC:2.4.2.9]","GO:0009116//nucleoside metabolic process;GO:0006223//uracil salvage;GO:0016036//cellular response to phosphate starvation;GO:0032502//developmental process","GO:0004845//uracil phosphoribosyltransferase activity","GO:0005829//cytosol;GO:0009570//chloroplast stroma"]
[815,"CSE_Unigene13082","SW_Unigene22081","+","-","-",363,{"v":0.992,"d":"99.20%"},3,{"v":1.78021,"d":"2"},{"v":1.21979,"d":"1"},{"v":0.247267,"d":"0.247"},{"v":0.156706,"d":"0.1567"},"gi|449463420|ref|XP_004149432.1|","PREDICTED: protein KRTCAP2 homolog isoform 1 [Cucumis sativus] >gi|449463422|ref|XP_004149433.1| PREDICTED: protein KRTCAP2 homolog isoform 2 [Cucumis sativus] >gi|449463424|ref|XP_004149434.1| PREDICTED: protein KRTCAP2 homolog isoform 3 [Cucumis sativus] >gi|449499071|ref|XP_004160713.1| PREDICTED: protein KRTCAP2 homolog isoform 1 [Cucumis sativus] >gi|449499073|ref|XP_004160714.1| PREDICTED: protein KRTCAP2 homolog isoform 2 [Cucumis sativus]","gi|359494607|ref|XM_002264629.2|","PREDICTED: Vitis vinifera protein KRTCAP2 homolog-like (LOC100266739), mRNA","-","-","-","-","-","-","-","GO:0016132//brassinosteroid biosynthetic process;GO:0006084//acetyl-CoA metabolic process;GO:0016126//sterol biosynthetic process","-","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0009507//chloroplast;GO:0016020//membrane;GO:0005783//endoplasmic reticulum"]
[816,"CSE_Unigene13137","SW_CL5571_Contig2","+","-","-",378,{"v":0.989,"d":"98.90%"},4,1,3,{"v":0.918453,"d":"0.918"},{"v":0.65591,"d":"0.6559"},"gi|225441181|ref|XP_002269130.1|","PREDICTED: dual specificity phosphatase Cdc25 [Vitis vinifera] >gi|297739969|emb|CBI30151.3| unnamed protein product [Vitis vinifera]","gi|349714030|emb|FQ386685.1|","Vitis vinifera clone SS0AEB29YB14","sp|Q8GY31|CDC25_ARATH","Dual specificity phosphatase Cdc25 OS=Arabidopsis thaliana GN=CDC25 PE=1 SV=1","COG0607","Rhodanese-related sulfurtransferase","-","-","-","GO:0006468//protein phosphorylation;GO:0046685//response to arsenic-containing substance;GO:0035335//peptidyl-tyrosine dephosphorylation","GO:0004725//protein tyrosine phosphatase activity;GO:0005515//protein binding;GO:0030611//arsenate reductase activity","GO:0009507//chloroplast;GO:0005634//nucleus;GO:0005739//mitochondrion"]
[817,"CSE_Unigene13185","SW_Unigene21642","+","-","-",351,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225431173|ref|XP_002269631.1|","PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Vitis vinifera] >gi|297735030|emb|CBI17392.3| unnamed protein product [Vitis vinifera]","gi|359476606|ref|XM_002269595.2|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase Pin1-like (LOC100242075), mRNA","sp|Q9SL42|PIN1_ARATH","Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1","COG0760","Parvulin-like peptidyl-prolyl isomerase","K09578","vvi:100242075","peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]","GO:0006511//ubiquitin-dependent protein catabolic process;GO:0000413//protein peptidyl-prolyl isomerization;GO:0006457//protein folding;GO:0051726//regulation of cell cycle;GO:0009651//response to salt stress;GO:0051788//response to misfolded protein;GO:0080129//proteasome core complex assembly;GO:0009266//response to temperature stimulus;GO:0006972//hyperosmotic response;GO:0006833//water transport;GO:0007030//Golgi organization;GO:0006096//glycolysis;GO:0006094//gluconeogenesis;GO:0009853//photorespiration;GO:0046686//response to cadmium ion","GO:0003755//peptidyl-prolyl cis-trans isomerase activity;GO:0005515//protein binding","GO:0005829//cytosol;GO:0009506//plasmodesma;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[818,"CSE_Unigene13288","SW_Unigene16873","+","-","-",819,{"v":0.995,"d":"99.50%"},4,1,3,{"v":1.09598,"d":"1.096"},{"v":0.707878,"d":"0.7079"},"gi|359482209|ref|XP_003632728.1|","PREDICTED: pyrroline-5-carboxylate reductase-like [Vitis vinifera] >gi|297739905|emb|CBI30087.3| unnamed protein product [Vitis vinifera]","gi|359482208|ref|XM_003632680.1|","PREDICTED: Vitis vinifera pyrroline-5-carboxylate reductase-like (LOC100852984), mRNA","sp|O04016|P5CR_ACTCH","Pyrroline-5-carboxylate reductase OS=Actinidia chinensis PE=2 SV=1","COG0345","Pyrroline-5-carboxylate reductase","K00286","vvi:100852984","pyrroline-5-carboxylate reductase [EC:1.5.1.2]","GO:0055114//oxidation-reduction process;GO:0009651//response to salt stress;GO:0009408//response to heat;GO:0055129//L-proline biosynthetic process;GO:0006567//threonine catabolic process","GO:0000166//nucleotide binding;GO:0004735//pyrroline-5-carboxylate reductase activity","GO:0005618//cell wall;GO:0005737//cytoplasm"]
[819,"CSE_Unigene13357","SW_Unigene5199","+","-","-",306,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225454793|ref|XP_002276949.1|","PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Vitis vinifera] >gi|297737324|emb|CBI26525.3| unnamed protein product [Vitis vinifera]","gi|225454792|ref|XM_002276913.1|","PREDICTED: Vitis vinifera NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like (LOC100244359), mRNA","sp|Q9M9M6|NDUS6_ARATH","NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana GN=At3g03070 PE=3 SV=1","-","-","K03939","vvi:100244359","NADH dehydrogenase (ubiquinone) Fe-S protein 6 [EC:1.6.5.3 1.6.99.3]","GO:0006661//phosphatidylinositol biosynthetic process","-","GO:0005739//mitochondrion"]
[820,"CSE_Unigene13456","SW_Unigene23126","+","-","-",1686,{"v":0.992,"d":"99.20%"},13,3,10,{"v":1.0314,"d":"1.031"},{"v":0.970367,"d":"0.9704"},"gi|359488800|ref|XP_002272412.2|","PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]","gi|359488799|ref|XM_002272376.2|","PREDICTED: Vitis vinifera uncharacterized LOC100254349 (LOC100254349), mRNA","sp|Q67XL4|Y3544_ARATH","Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1","-","-","K11984","gmx:100785682","U4/U6.U5 tri-snRNP-associated protein 1","-","-","GO:0009507//chloroplast"]
[821,"CSE_Unigene13484","SW_Unigene18724","+","-","-",612,{"v":0.993,"d":"99.30%"},4,1,3,{"v":0.993763,"d":"0.994"},{"v":0.678764,"d":"0.6788"},"gi|225446821|ref|XP_002283420.1|","PREDICTED: mitochondrial substrate carrier family protein W [Vitis vinifera] >gi|302143540|emb|CBI22101.3| unnamed protein product [Vitis vinifera]","gi|359485355|ref|XM_002283384.2|","PREDICTED: Vitis vinifera mitochondrial substrate carrier family protein W-like (LOC100260754), mRNA","sp|P31692|ADT_PARKE","ADP,ATP carrier protein OS=Parachlorella kessleri PE=3 SV=1","-","-","K14684","olu:OSTLU_1898","solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41","GO:0006839//mitochondrial transport","-","GO:0005743//mitochondrial inner membrane;GO:0016021//integral to membrane"]
[822,"CSE_Unigene13574","SW_Unigene7321","+","-","-",534,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.14794,"d":"0.148"},{"v":0.121813,"d":"0.1218"},"gi|225462566|ref|XP_002268236.1|","PREDICTED: E2F-associated phosphoprotein isoform 2 [Vitis vinifera]","gi|225462565|ref|XM_002268200.1|","PREDICTED: Vitis vinifera E2F-associated phosphoprotein-like, transcript variant 2 (LOC100248049), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[823,"CSE_Unigene1359","SW_Unigene5990","+","-","-",666,{"v":0.921,"d":"92.10%"},50,{"v":18.3055,"d":"18"},{"v":31.6945,"d":"32"},{"v":0.670085,"d":"0.670"},{"v":0.193875,"d":"0.1939"},"gi|147819097|emb|CAN64505.1|","hypothetical protein VITISV_016998 [Vitis vinifera]","gi|123653669|emb|AM425227.1|","Vitis vinifera contig VV78X032818.20, whole genome shotgun sequence","sp|Q9LK03|PERK2_ARATH","Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3","-","-","-","-","-","-","-","-"]
[824,"CSE_Unigene13772","SW_Unigene15187","+","-","-",345,{"v":0.994,"d":"99.40%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|225434098|ref|XP_002276080.1|","PREDICTED: 60S ribosomal protein L51, mitochondrial isoform 1 [Vitis vinifera] >gi|225434100|ref|XP_002276106.1| PREDICTED: 60S ribosomal protein L51, mitochondrial isoform 2 [Vitis vinifera] >gi|147861396|emb|CAN83982.1| hypothetical protein VITISV_001097 [Vitis vinifera] >gi|296084281|emb|CBI24669.3| unnamed protein product [Vitis vinifera]","gi|349719253|emb|FQ397555.1|","Vitis vinifera clone SS0AEB6YG24","-","-","-","-","-","-","-","-","-","GO:0005840//ribosome;GO:0005739//mitochondrion"]
[825,"CSE_Unigene13781","SW_Unigene21539","+","-","-",294,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225434792|ref|XP_002282124.1|","PREDICTED: transcription elongation factor B polypeptide 1 [Vitis vinifera]","gi|225434791|ref|XM_002282088.1|","PREDICTED: Vitis vinifera transcription elongation factor B polypeptide 1-like (LOC100258618), mRNA","-","-","-","-","K03872","vvi:100258618","transcription elongation factor B, polypeptide 1","GO:0006511//ubiquitin-dependent protein catabolic process;GO:0009062//fatty acid catabolic process;GO:0006414//translational elongation;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0006366//transcription from RNA polymerase II promoter","GO:0003746//translation elongation factor activity","GO:0005829//cytosol;GO:0005634//nucleus"]
[826,"CSE_Unigene13860","SW_Unigene6840","+","-","-",2139,{"v":0.992,"d":"99.20%"},15,7,8,{"v":0.34883,"d":"0.349"},{"v":0.041336,"d":"0.0413"},"gi|359473049|ref|XP_002276821.2|","PREDICTED: uncharacterized protein At4g19900-like [Vitis vinifera]","gi|123684762|emb|AM459855.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X190736.11, clone ENTAV 115","sp|P0C8Q4|Y4990_ARATH","Uncharacterized protein At4g19900 OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1","-","-","K01988","sbi:SORBI_02g036660","lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]","-","GO:0016757//transferase activity, transferring glycosyl groups","GO:0005794//Golgi apparatus"]
[827,"CSE_Unigene13991","SW_Unigene8148","+","-","-",975,{"v":0.995,"d":"99.50%"},5,3,2,{"v":0.229528,"d":"0.230"},{"v":0.109652,"d":"0.1097"},"gi|225432526|ref|XP_002280269.1|","PREDICTED: UPF0613 protein PB24D3.06c [Vitis vinifera]","gi|225432525|ref|XM_002280233.1|","PREDICTED: Vitis vinifera uncharacterized LOC100247805 (LOC100247805), mRNA","-","-","COG0596","Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ","-","-","-","-","-","GO:0009507//chloroplast"]
[828,"CSE_Unigene13994","SW_Unigene22182","+","-","-",1056,{"v":0.991,"d":"99.10%"},9,5,4,{"v":0.271486,"d":"0.271"},{"v":0.0521335,"d":"0.0521"},"gi|225454559|ref|XP_002263175.1|","PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit [Vitis vinifera] >gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]","gi|225454558|ref|XM_002263139.1|","PREDICTED: Vitis vinifera N-alpha-acetyltransferase 38, NatC auxiliary subunit-like (LOC100247782), mRNA","-","-","COG1958","Small nuclear ribonucleoprotein (snRNP) homolog","K12627","vvi:100247782","U6 snRNA-associated Sm-like protein LSm8","GO:0016070//RNA metabolic process;GO:0010103//stomatal complex morphogenesis;GO:0006626//protein targeting to mitochondrion;GO:0048443//stamen development;GO:0002237//response to molecule of bacterial origin;GO:0007165//signal transduction","GO:0005515//protein binding;GO:0016787//hydrolase activity","GO:0005829//cytosol;GO:0005732//small nucleolar ribonucleoprotein complex;GO:0005634//nucleus"]
[829,"CSE_Unigene13998","SW_Unigene6881","+","-","-",765,{"v":0.978,"d":"97.80%"},15,9,6,{"v":0.26409,"d":"0.264"},{"v":0.0108564,"d":"0.0109"},"gi|147860976|emb|CAN82942.1|","hypothetical protein VITISV_013130 [Vitis vinifera]","gi|225448722|ref|XM_002275386.1|","PREDICTED: Vitis vinifera UPF0176 protein Mfla_2319-like (LOC100253612), mRNA","sp|Q1JPN0|STR7_ARATH","Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana GN=STR7 PE=2 SV=1","COG1054","Predicted sulfurtransferase","K10838","ota:Ot14g02880","xeroderma pigmentosum group C-complementing protein","GO:0007568//aging","-","GO:0009579//thylakoid;GO:0044425//membrane part;GO:0009507//chloroplast"]
[830,"CSE_Unigene139","SW_CL5729_Contig3","+","-","-",1134,{"v":0.996,"d":"99.60%"},5,2,3,{"v":0.513667,"d":"0.514"},{"v":0.377742,"d":"0.3777"},"gi|225461900|ref|XP_002266459.1|","PREDICTED: cysteine synthase 2 [Vitis vinifera] >gi|296089907|emb|CBI39726.3| unnamed protein product [Vitis vinifera]","gi|359494309|ref|XM_002266423.2|","PREDICTED: Vitis vinifera cysteine synthase 2-like (LOC100260099), mRNA","sp|O81155|CYSKP_SOLTU","Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1","COG0031","Cysteine synthase","K01738","vvi:100260099","cysteine synthase A [EC:2.5.1.47]","GO:0048573//photoperiodism, flowering;GO:0006535//cysteine biosynthetic process from serine","GO:0030170//pyridoxal phosphate binding;GO:0004124//cysteine synthase activity;GO:0016740//transferase activity","-"]
[831,"CSE_Unigene14019","SW_Unigene16419","+","-","-",672,{"v":0.993,"d":"99.30%"},5,"NA",5,"NA","NA","gi|297736295|emb|CBI24933.3|","unnamed protein product [Vitis vinifera]","gi|359487398|ref|XM_002273526.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261983 (LOC100261983), mRNA","sp|P40934|CYB5_BRAOB","Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1","COG5274","Cytochrome b involved in lipid metabolism","K13076","vvi:100259521","delta8-fatty-acid desaturase [EC:1.14.19.4]","GO:0010311//lateral root formation","GO:0046872//metal ion binding;GO:0020037//heme binding","GO:0005829//cytosol"]
[832,"CSE_Unigene14123","SW_Unigene14700","+","-","-",1719,{"v":0.991,"d":"99.10%"},16,9,7,{"v":0.313331,"d":"0.313"},{"v":0.0196779,"d":"0.0197"},"gi|225446991|ref|XP_002268472.1|","PREDICTED: BTB/POZ domain-containing protein At2g04740-like [Vitis vinifera]","gi|225446990|ref|XM_002268436.1|","PREDICTED: Vitis vinifera BTB/POZ domain-containing protein At2g04740-like (LOC100260193), mRNA","sp|Q9SJ85|Y2474_ARATH","BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2","COG0666","FOG: Ankyrin repeat","K10523","olu:OSTLU_4529","speckle-type POZ protein","GO:0009954//proximal/distal pattern formation;GO:0048439//flower morphogenesis;GO:0010227//floral organ abscission","-","GO:0005737//cytoplasm"]
[833,"CSE_Unigene14139","SW_Unigene22647","+","-","-",1317,{"v":0.992,"d":"99.20%"},10,5,5,{"v":0.312556,"d":"0.313"},{"v":0.0658508,"d":"0.0659"},"gi|225442737|ref|XP_002280567.1|","PREDICTED: GPI mannosyltransferase 1 [Vitis vinifera]","gi|225442736|ref|XM_002280531.1|","PREDICTED: Vitis vinifera GPI mannosyltransferase 1-like (LOC100265195), mRNA","sp|Q500W7|PIGM_ARATH","GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1","-","-","K05284","vvi:100265195","phosphatidylinositol glycan, class M [EC:2.4.1.-]","GO:0017148//negative regulation of translation;GO:0051301//cell division;GO:0006506//GPI anchor biosynthetic process;GO:0030244//cellulose biosynthetic process;GO:0009790//embryo development;GO:0009832//plant-type cell wall biogenesis","GO:0048027//mRNA 5'-UTR binding;GO:0010313//phytochrome binding;GO:0008270//zinc ion binding;GO:0051751//alpha-1,4-mannosyltransferase activity;GO:0003677//DNA binding;GO:0004518//nuclease activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0016021//integral to membrane;GO:0005789//endoplasmic reticulum membrane;GO:0005829//cytosol;GO:0005634//nucleus;GO:0005739//mitochondrion"]
[834,"CSE_Unigene1437","SW_Unigene13699","+","-","-",1587,{"v":0.995,"d":"99.50%"},8,5,3,{"v":0.151745,"d":"0.152"},{"v":0.0109868,"d":"0.0110"},"gi|297739644|emb|CBI29826.3|","unnamed protein product [Vitis vinifera]","gi|225441855|ref|XM_002278477.1|","PREDICTED: Vitis vinifera protein N-terminal glutamine amidohydrolase-like (LOC100245162), mRNA","sp|O22944|NTAQ1_ARATH","Protein N-terminal glutamine amidohydrolase OS=Arabidopsis thaliana GN=At2g41760 PE=2 SV=1","-","-","-","-","-","-","GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","-"]
[835,"CSE_Unigene14499","SW_Unigene8352","+","-","-",1431,{"v":0.994,"d":"99.40%"},8,4,4,{"v":0.298904,"d":"0.299"},{"v":0.0887367,"d":"0.0887"},"gi|225427019|ref|XP_002271288.1|","PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform 1 [Vitis vinifera]","gi|359474360|ref|XM_002271252.2|","PREDICTED: Vitis vinifera NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like, transcript variant 1 (LOC100245490), mRNA","sp|Q9FGK0|NDUB8_ARATH","NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1","-","-","-","-","-","GO:0006511//ubiquitin-dependent protein catabolic process;GO:0051788//response to misfolded protein;GO:0080129//proteasome core complex assembly;GO:0009853//photorespiration","-","GO:0005747//mitochondrial respiratory chain complex I"]
[836,"CSE_Unigene14738","SW_Unigene20979","+","-","-",342,{"v":0.997,"d":"99.70%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225423607|ref|XP_002274221.1|","PREDICTED: GTP-binding protein ERG-like [Vitis vinifera]","gi|225423606|ref|XM_002274185.1|","PREDICTED: Vitis vinifera GTP-binding protein ERG-like (LOC100244086), mRNA","sp|O82653|ERG_ARATH","GTP-binding protein ERG OS=Arabidopsis thaliana GN=ERG PE=1 SV=2","COG1159","GTPase","K03595","cme:CMN201C","GTP-binding protein Era","GO:0006897//endocytosis","GO:0005525//GTP binding","GO:0009507//chloroplast;GO:0005829//cytosol"]
[837,"CSE_Unigene14746","SW_Unigene8348","+","-","-",435,{"v":0.986,"d":"98.60%"},6,3,3,{"v":0.44017,"d":"0.440"},{"v":0.26756,"d":"0.2676"},"gi|225437924|ref|XP_002268190.1|","PREDICTED: uncharacterized protein LOC100241287 [Vitis vinifera] >gi|297744252|emb|CBI37222.3| unnamed protein product [Vitis vinifera]","gi|349713439|emb|FQ396716.1|","Vitis vinifera clone SS0AEB9YA20","-","-","-","-","-","-","-","GO:0009853//photorespiration","-","GO:0005774//vacuolar membrane;GO:0005749//mitochondrial respiratory chain complex II;GO:0009536//plastid"]
[838,"CSE_Unigene14871","SW_Unigene16499","+","-","-",759,{"v":0.993,"d":"99.30%"},5,3,2,{"v":0.25878,"d":"0.259"},{"v":0.136495,"d":"0.1365"},"gi|359476279|ref|XP_002280034.2|","PREDICTED: uncharacterized protein LOC100242172 [Vitis vinifera] >gi|296081720|emb|CBI20725.3| unnamed protein product [Vitis vinifera]","gi|359476278|ref|XM_002279998.2|","PREDICTED: Vitis vinifera uncharacterized LOC100242172 (LOC100242172), mRNA","sp|O78424|YCF19_GUITH","Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1","COG0762","Predicted integral membrane protein","K02221","vvi:100242172","YggT family protein","-","-","GO:0016020//membrane"]
[839,"CSE_Unigene14897","SW_Unigene22436","+","-","-",945,{"v":0.996,"d":"99.60%"},4,2,2,{"v":0.340302,"d":"0.340"},{"v":0.265141,"d":"0.2651"},"gi|225464269|ref|XP_002271336.1|","PREDICTED: uncharacterized protein R106 [Vitis vinifera]","gi|359491788|ref|XM_002271300.2|","PREDICTED: Vitis vinifera uncharacterized LOC100240946 (LOC100240946), mRNA","sp|Q84ZL0|FH5_ORYSJ","Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2","COG2404","Predicted phosphohydrolase (DHH superfamily)","K14563","zma:100282167","rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]","-","-","-"]
[840,"CSE_Unigene15176","SW_Unigene11119","+","-","-",378,{"v":0.989,"d":"98.90%"},4,2,2,{"v":0.39578,"d":"0.396"},{"v":0.315425,"d":"0.3154"},"gi|225441461|ref|XP_002279787.1|","PREDICTED: metal tolerance protein C2 [Vitis vinifera] >gi|297739829|emb|CBI30011.3| unnamed protein product [Vitis vinifera]","gi|359482170|ref|XM_002279751.2|","PREDICTED: Vitis vinifera metal tolerance protein C2-like (LOC100248736), mRNA","sp|Q6ICY4|MTPC2_ARATH","Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=1 SV=1","COG1230","Co/Zn/Cd efflux system component","K14694","rcu:RCOM_0503980","solute carrier family 30 (zinc transporter), member 7","GO:0009624//response to nematode;GO:0055085//transmembrane transport;GO:0006812//cation transport","GO:0008324//cation transmembrane transporter activity;GO:0015562//efflux transmembrane transporter activity","GO:0005794//Golgi apparatus;GO:0005886//plasma membrane;GO:0016021//integral to membrane"]
[841,"CSE_Unigene15240","SW_Unigene22870","+","-","-",1164,{"v":0.991,"d":"99.10%"},8,2,6,{"v":1.18933,"d":"1.189"},{"v":0.931134,"d":"0.9311"},"gi|297745122|emb|CBI38961.3|","unnamed protein product [Vitis vinifera]","gi|359483113|ref|XM_002274479.2|","PREDICTED: Vitis vinifera zinc finger CCCH domain-containing protein 16-like (LOC100243153), mRNA","sp|Q9FWS3|C3H16_ARATH","Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana GN=At1g75340 PE=2 SV=2","COG5084","Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins","K14321","vvi:100243153","nucleoporin-like protein 2","-","GO:0005488//binding","GO:0005634//nucleus"]
[842,"CSE_Unigene15261","SW_Unigene17730","+","-","-",990,{"v":0.994,"d":"99.40%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|225426826|ref|XP_002283246.1|","PREDICTED: replication factor C subunit 2 [Vitis vinifera] >gi|297742576|emb|CBI34725.3| unnamed protein product [Vitis vinifera]","gi|359474235|ref|XM_002283210.2|","PREDICTED: Vitis vinifera replication factor C subunit 2-like (LOC100246202), mRNA","-","-","COG0470","ATPase involved in DNA replication","K10755","vvi:100246202","replication factor C subunit 2/4","GO:0006260//DNA replication","GO:0003887//DNA-directed DNA polymerase activity;GO:0003677//DNA binding;GO:0005524//ATP binding;GO:0016887//ATPase activity","GO:0005634//nucleus;GO:0005663//DNA replication factor C complex"]
[843,"CSE_Unigene15312","SW_CL3351_Contig1","+","-","-",360,{"v":0.981,"d":"98.10%"},7,3,4,{"v":0.544323,"d":"0.544"},{"v":0.113115,"d":"0.1131"},"gi|225452440|ref|XP_002277524.1|","PREDICTED: proteasome assembly chaperone 3 [Vitis vinifera] >gi|296087655|emb|CBI34911.3| unnamed protein product [Vitis vinifera]","gi|225452439|ref|XM_002277488.1|","PREDICTED: Vitis vinifera proteasome assembly chaperone 3-like (LOC100242250), mRNA","-","-","-","-","K11877","vvi:100242250","proteasome assembly chaperone 3","GO:0009062//fatty acid catabolic process","-","GO:0000502//proteasome complex;GO:0005634//nucleus"]
[844,"CSE_Unigene15339","SW_Unigene14168","+","-","-",348,{"v":0.997,"d":"99.70%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|449464004|ref|XP_004149719.1|","PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cucumis sativus] >gi|449516703|ref|XP_004165386.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cucumis sativus]","gi|359475899|ref|XM_002285542.2|","PREDICTED: Vitis vinifera DNA-directed RNA polymerase II subunit RPB11-like (LOC100259467), mRNA","sp|Q38859|RPB11_ARATH","DNA-directed RNA polymerase II subunit RPB11 OS=Arabidopsis thaliana GN=RPB13.6 PE=2 SV=1","COG1761","DNA-directed RNA polymerase, subunit L","K03008","vvi:100259467","DNA-directed RNA polymerase II subunit RPB11","GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0051788//response to misfolded protein;GO:0009853//photorespiration;GO:0006366//transcription from RNA polymerase II promoter;GO:0010050//vegetative phase change;GO:0080129//proteasome core complex assembly;GO:0009086//methionine biosynthetic process;GO:0006511//ubiquitin-dependent protein catabolic process;GO:0009616//virus induced gene silencing","GO:0003899//DNA-directed RNA polymerase activity;GO:0046983//protein dimerization activity;GO:0003677//DNA binding","GO:0000419//DNA-directed RNA polymerase V complex;GO:0000418//DNA-directed RNA polymerase IV complex;GO:0005665//DNA-directed RNA polymerase II, core complex"]
[845,"CSE_Unigene15541","SW_Unigene4570","+","-","-",909,{"v":0.986,"d":"98.60%"},13,5,8,{"v":0.556244,"d":"0.556"},{"v":0.318566,"d":"0.3186"},"gi|225465292|ref|XP_002268908.1|","PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Vitis vinifera] >gi|297739442|emb|CBI29624.3| unnamed protein product [Vitis vinifera]","gi|225465291|ref|XM_002268872.1|","PREDICTED: Vitis vinifera 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like (LOC100247263), mRNA","sp|P69834|ISPD_ARATH","2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1","COG1211","4-diphosphocytidyl-2-methyl-D-erithritol synthase","K00991","vvi:100247263","2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]","GO:0008299//isoprenoid biosynthetic process","GO:0003824//catalytic activity","GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0009570//chloroplast stroma"]
[846,"CSE_Unigene15592","SW_Unigene15507","+","-","-",777,{"v":0.994,"d":"99.40%"},5,3,2,{"v":0.24312,"d":"0.243"},{"v":0.122417,"d":"0.1224"},"gi|296082498|emb|CBI21503.3|","unnamed protein product [Vitis vinifera]","gi|225438566|ref|XM_002276073.1|","PREDICTED: Vitis vinifera 4-alpha-glucanotransferase, chloroplastic/amyloplastic-like (LOC100259462), mRNA","sp|Q06801|DPEP_SOLTU","4-alpha-glucanotransferase, chloroplastic/amyloplastic OS=Solanum tuberosum GN=DPEP PE=1 SV=1","COG1640","4-alpha-glucanotransferase","K00705","vvi:100259462","4-alpha-glucanotransferase [EC:2.4.1.25]","GO:0000025//maltose catabolic process;GO:0006006//glucose metabolic process;GO:0005983//starch catabolic process","GO:0043169//cation binding;GO:0004134//4-alpha-glucanotransferase activity","GO:0009507//chloroplast"]
[847,"CSE_Unigene15614","SW_CL7574_Contig1","+","-","-",1005,{"v":0.992,"d":"99.20%"},8,5,3,{"v":0.189718,"d":"0.190"},{"v":0.0236799,"d":"0.0237"},"gi|297738687|emb|CBI27932.3|","unnamed protein product [Vitis vinifera]","gi|359484313|ref|XM_002282485.2|","PREDICTED: Vitis vinifera acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase-like (LOC100242296), mRNA","sp|Q9SU91|LPXA_ARATH","Probable acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, mitochondrial OS=Arabidopsis thaliana GN=LPXA PE=1 SV=1","COG1043","Acyl-[acyl carrier protein]-UDP-N-acetylglucosamine O-acyltransferase","K00677","vvi:100242296","UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]","GO:0019408//dolichol biosynthetic process;GO:2001289//lipid X metabolic process","GO:0008780//acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity","GO:0005739//mitochondrion"]
[848,"CSE_Unigene15705","SW_Unigene14983","+","-","-",783,{"v":0.992,"d":"99.20%"},6,5,1,{"v":0.0858096,"d":"0.086"},{"v":0.0105439,"d":"0.0105"},"gi|225429530|ref|XP_002279085.1|","PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Vitis vinifera]","gi|359476240|ref|XM_002279049.2|","PREDICTED: Vitis vinifera UDP-sulfoquinovose synthase, chloroplastic-like (LOC100242408), mRNA","sp|O48917|SQD1_ARATH","UDP-sulfoquinovose synthase, chloroplastic OS=Arabidopsis thaliana GN=SQD1 PE=1 SV=1","COG0451","Nucleoside-diphosphate-sugar epimerases","K06118","vvi:100242408","UDP-sulfoquinovose synthase [EC:3.13.1.1]","GO:0046506//sulfolipid biosynthetic process;GO:0019375//galactolipid biosynthetic process;GO:0016036//cellular response to phosphate starvation","GO:0008270//zinc ion binding;GO:0046507//UDPsulfoquinovose synthase activity;GO:0008146//sulfotransferase activity;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding","GO:0009507//chloroplast"]
[849,"CSE_Unigene15825","SW_Unigene21944","+","-","-",516,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.176752,"d":"0.177"},{"v":0.152457,"d":"0.1525"},"gi|225443005|ref|XP_002269416.1|","PREDICTED: DCC family protein At1g52590, chloroplastic [Vitis vinifera]","gi|225443004|ref|XM_002269380.1|","PREDICTED: Vitis vinifera DCC family protein At1g52590, chloroplastic-like (LOC100262852), mRNA","sp|Q9SSR1|Y1259_ARATH","DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=1 SV=1","COG3011","Uncharacterized protein conserved in bacteria","-","-","-","-","-","GO:0010287//plastoglobule"]
[850,"CSE_Unigene15847","SW_Unigene17452","+","-","-",1623,{"v":0.994,"d":"99.40%"},10,8,2,{"v":0.103463,"d":"0.103"},{"v":0.00137529,"d":"0.0014"},"gi|225438954|ref|XP_002284222.1|","PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]","gi|359480579|ref|XM_002284186.2|","PREDICTED: Vitis vinifera uncharacterized LOC100254381 (LOC100254381), mRNA","-","-","COG0571","dsRNA-specific ribonuclease","-","-","-","GO:0016075//rRNA catabolic process;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0010027//thylakoid membrane organization;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0051607//defense response to virus","GO:0004525//ribonuclease III activity;GO:0003723//RNA binding","GO:0009507//chloroplast"]
[851,"CSE_Unigene15957","SW_Unigene7992","+","-","-",885,{"v":0.986,"d":"98.60%"},12,5,7,{"v":0.419462,"d":"0.419"},{"v":0.122236,"d":"0.1222"},"gi|359483124|ref|XP_003632908.1|","PREDICTED: uric acid degradation bifunctional protein TTL-like [Vitis vinifera]","gi|359483123|ref|XM_003632860.1|","PREDICTED: Vitis vinifera uric acid degradation bifunctional protein TTL-like (LOC100243214), mRNA","sp|Q9LVM5|TTHL_ARATH","Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1","COG3195","Uncharacterized protein conserved in bacteria","K13484","vvi:100243214","5-hydroxyisourate hydrolase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:3.5.2.17 4.1.1.-]","GO:0009960//endosperm development;GO:0006499//N-terminal protein myristoylation;GO:0006810//transport;GO:0051289//protein homotetramerization;GO:0009793//embryo development ending in seed dormancy;GO:0006144//purine nucleobase metabolic process;GO:0019428//allantoin biosynthetic process;GO:0009742//brassinosteroid mediated signaling pathway;GO:0001560//regulation of cell growth by extracellular stimulus;GO:0031347//regulation of defense response;GO:0009627//systemic acquired resistance","GO:0005515//protein binding;GO:0033971//hydroxyisourate hydrolase activity;GO:0051997//2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity","GO:0031234//extrinsic to internal side of plasma membrane;GO:0005576//extracellular region;GO:0005777//peroxisome;GO:0005829//cytosol;GO:0005634//nucleus"]
[852,"CSE_Unigene16136","SW_Unigene12730","+","-","-",1314,{"v":0.99,"d":"99.00%"},13,5,8,{"v":0.650885,"d":"0.651"},{"v":0.527661,"d":"0.5277"},"gi|225447541|ref|XP_002268643.1|","PREDICTED: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [Vitis vinifera]","gi|359485765|ref|XM_002268607.2|","PREDICTED: Vitis vinifera alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like (LOC100240895), mRNA","-","-","-","-","K00736","vvi:100240895","alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]","GO:0042732//D-xylose metabolic process;GO:0009312//oligosaccharide biosynthetic process","GO:0008455//alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","GO:0005795//Golgi stack;GO:0016021//integral to membrane"]
[853,"CSE_Unigene16161","SW_Unigene22415","+","-","-",1284,{"v":0.993,"d":"99.30%"},9,3,6,{"v":0.480924,"d":"0.481"},{"v":0.247378,"d":"0.2474"},"gi|359488041|ref|XP_003633692.1|","PREDICTED: GPI-anchor transamidase-like [Vitis vinifera]","gi|359488040|ref|XM_003633644.1|","PREDICTED: Vitis vinifera GPI-anchor transamidase-like (LOC100853299), mRNA","sp|P49047|VPEA_ARATH","Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2","COG5206","Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8","K05290","vvi:100853299","phosphatidylinositol glycan, class K [EC:2.6.-.-]","GO:0046520//sphingoid biosynthetic process;GO:0006508//proteolysis;GO:0016126//sterol biosynthetic process","GO:0003923//GPI-anchor transamidase activity;GO:0004197//cysteine-type endopeptidase activity","GO:0005783//endoplasmic reticulum"]
[854,"CSE_Unigene16477","SW_Unigene14781","+","-","-",1491,{"v":0.985,"d":"98.50%"},10,3,7,{"v":0.877843,"d":"0.878"},{"v":0.959415,"d":"0.9594"},"gi|296084697|emb|CBI25839.3|","unnamed protein product [Vitis vinifera]","gi|359496963|ref|XM_002269921.2|","PREDICTED: Vitis vinifera pre-rRNA-processing protein esf1-like (LOC100254034), mRNA","sp|Q9SCQ7|AN32_ARATH","Acidic leucine-rich nuclear phosphoprotein 32-related protein OS=Arabidopsis thaliana GN=At3g50690 PE=2 SV=1","COG5638","Uncharacterized conserved protein","K11323","vcn:VOLCADRAFT_121342","histone arginine demethylase JMJD6 [EC:1.14.11.-]","GO:0009560//embryo sac egg cell differentiation;GO:0000741//karyogamy","-","GO:0005634//nucleus;GO:0005829//cytosol"]
[855,"CSE_Unigene16758","SW_Unigene13127","+","-","-",288,{"v":0.993,"d":"99.30%"},2,"NA",2,"NA","NA","gi|225445094|ref|XP_002280444.1|","PREDICTED: uncharacterized protein LOC100254132 [Vitis vinifera] >gi|297738758|emb|CBI28003.3| unnamed protein product [Vitis vinifera]","gi|225445093|ref|XM_002280408.1|","PREDICTED: Vitis vinifera uncharacterized LOC100254132 (LOC100254132), mRNA","-","-","-","-","K15463","vvi:100254132","tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]","GO:0006417//regulation of translation","GO:0016763//transferase activity, transferring pentosyl groups","GO:0005634//nucleus;GO:0009536//plastid"]
[856,"CSE_Unigene16945","SW_Unigene18551","+","-","-",798,{"v":0.994,"d":"99.40%"},5,{"v":3.84105,"d":"4"},{"v":1.15895,"d":"1"},{"v":0.0938128,"d":"0.094"},{"v":0.0122644,"d":"0.0123"},"gi|225456513|ref|XP_002284706.1|","PREDICTED: chromophore lyase CpcT/CpeT 3 [Vitis vinifera] >gi|147860848|emb|CAN83158.1| hypothetical protein VITISV_022553 [Vitis vinifera] >gi|297734523|emb|CBI15770.3| unnamed protein product [Vitis vinifera]","gi|225456512|ref|XM_002284670.1|","PREDICTED: Vitis vinifera chromophore lyase CpcT/CpeT 3-like (LOC100264699), mRNA","-","-","-","-","K00366","ota:Ot10g00930","ferredoxin-nitrite reductase [EC:1.7.7.1]","GO:0010020//chloroplast fission;GO:0051302//regulation of cell division;GO:0017009//protein-phycocyanobilin linkage;GO:0000302//response to reactive oxygen species","-","GO:0009707//chloroplast outer membrane"]
[857,"CSE_Unigene17226","SW_Unigene8307","+","-","-",483,{"v":0.992,"d":"99.20%"},4,3,1,{"v":0.113783,"d":"0.114"},{"v":0.0501532,"d":"0.0502"},"gi|317376147|sp|A5BJL8.1|CYNS_VITVI","RecName: Full=Cyanate hydratase; Short=Cyanase; AltName: Full=Cyanate hydrolase; AltName: Full=Cyanate lyase","gi|359477677|ref|XM_002285357.2|","PREDICTED: Vitis vinifera Cyanate hydratase (CYN), mRNA","sp|A5BJL8|CYNS_VITVI","Cyanate hydratase OS=Vitis vinifera GN=CYN PE=3 SV=1","COG1513","Cyanate lyase","K01725","vvi:100245884","cyanate lyase [EC:4.2.1.104]","GO:0009440//cyanate catabolic process;GO:0009651//response to salt stress","GO:0042802//identical protein binding;GO:0003677//DNA binding;GO:0008824//cyanate hydratase activity","GO:0005829//cytosol"]
[858,"CSE_Unigene17247","SW_Unigene22236","+","-","-",984,{"v":0.988,"d":"98.80%"},12,3,9,{"v":1.2487,"d":"1.249"},{"v":0.984968,"d":"0.9850"},"gi|225432236|ref|XP_002270713.1|","PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera] >gi|147864086|emb|CAN81122.1| hypothetical protein VITISV_038478 [Vitis vinifera] >gi|297736839|emb|CBI26040.3| unnamed protein product [Vitis vinifera]","gi|225432235|ref|XM_002270677.1|","PREDICTED: Vitis vinifera uncharacterized LOC100244285 (LOC100244285), mRNA","sp|Q8RXW0|Y3761_ARATH","Uncharacterized protein At3g17611 OS=Arabidopsis thaliana GN=At3g17611 PE=2 SV=1","COG0705","Uncharacterized membrane protein (homolog of Drosophila rhomboid)","K09651","vvi:100244285","rhomboid domain-containing protein 1 [EC:3.4.21.-]","-","GO:0004252//serine-type endopeptidase activity;GO:0008270//zinc ion binding","GO:0016021//integral to membrane;GO:0005622//intracellular;GO:0005886//plasma membrane"]
[859,"CSE_Unigene17253","SW_Unigene5449","+","-","-",831,{"v":0.988,"d":"98.80%"},10,7,3,{"v":0.160187,"d":"0.160"},{"v":0.00608768,"d":"0.0061"},"gi|147856052|emb|CAN78612.1|","hypothetical protein VITISV_028922 [Vitis vinifera]","gi|147856051|emb|AM445236.2|","Vitis vinifera contig VV78X133878.36, whole genome shotgun sequence","sp|O50061|RK4_ARATH","50S ribosomal protein L4, chloroplastic OS=Arabidopsis thaliana GN=RPL4 PE=1 SV=2","COG0088","Ribosomal protein L4","K02926","pop:POPTR_802304","large subunit ribosomal protein L4","GO:0006353//DNA-dependent transcription, termination;GO:0006412//translation;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006355//regulation of transcription, DNA-dependent;GO:0019344//cysteine biosynthetic process","GO:0003735//structural constituent of ribosome;GO:0008266//poly(U) RNA binding;GO:0019843//rRNA binding","GO:0022626//cytosolic ribosome;GO:0009570//chloroplast stroma;GO:0000311//plastid large ribosomal subunit;GO:0009535//chloroplast thylakoid membrane;GO:0005634//nucleus"]
[860,"CSE_Unigene17347","SW_Unigene5511","+","-","-",879,{"v":0.993,"d":"99.30%"},6,3,3,{"v":0.310466,"d":"0.310"},{"v":0.150483,"d":"0.1505"},"gi|296082467|emb|CBI21472.3|","unnamed protein product [Vitis vinifera]","gi|359480841|ref|XM_002276724.2|","PREDICTED: Vitis vinifera probable ribosome biogenesis protein C16orf42 homolog (LOC100247485), mRNA","-","-","COG2042","Uncharacterized conserved protein","K09140","vvi:100247485","pre-rRNA-processing protein TSR3","GO:0006364//rRNA processing","-","GO:0005634//nucleus;GO:0005829//cytosol"]
[861,"CSE_Unigene17379","SW_Unigene14640","+","-","-",2625,{"v":0.996,"d":"99.60%"},11,7,4,{"v":0.173815,"d":"0.174"},{"v":0.00507454,"d":"0.0051"},"gi|225439268|ref|XP_002265056.1|","PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]","gi|225439267|ref|XM_002265020.1|","PREDICTED: Vitis vinifera uncharacterized LOC100261641 (LOC100261641), mRNA","sp|Q9FN03|UVR8_ARATH","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1","COG5184","Alpha-tubulin suppressor and related RCC1 domain-containing proteins","K10615","cme:CMB070C","E3 ubiquitin-protein ligase HERC4 [EC:6.3.2.19]","GO:0019375//galactolipid biosynthetic process;GO:0045892//negative regulation of transcription, DNA-dependent;GO:0016036//cellular response to phosphate starvation","-","GO:0005634//nucleus"]
[862,"CSE_Unigene17478","SW_Unigene4158","+","-","-",1626,{"v":0.985,"d":"98.50%"},19,8,11,{"v":0.46606,"d":"0.466"},{"v":0.108286,"d":"0.1083"},"gi|359485114|ref|XP_002267225.2|","PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]","gi|147783368|emb|AM479352.2|","Vitis vinifera contig VV79X001573.4, whole genome shotgun sequence","sp|Q9LV48|PERK1_ARATH","Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1","-","-","K14849","vvi:100247924","ribosomal RNA-processing protein 1","GO:0006606//protein import into nucleus","-","GO:0005829//cytosol"]
[863,"CSE_Unigene17798","SW_Unigene3848","+","-","-",750,{"v":0.993,"d":"99.30%"},5,2,3,{"v":0.503941,"d":"0.504"},{"v":0.370687,"d":"0.3707"},"gi|225437002|ref|XP_002277634.1|","PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]","gi|225437001|ref|XM_002277598.1|","PREDICTED: Vitis vinifera DNA repair helicase UVH6-like (LOC100240869), mRNA","sp|Q8W4M7|ERCC2_ARATH","DNA repair helicase UVH6 OS=Arabidopsis thaliana GN=UVH6 PE=1 SV=1","COG1199","Rad3-related DNA helicases","K10844","vvi:100240869","DNA excision repair protein ERCC-2 [EC:3.6.4.12]","GO:0010286//heat acclimation;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0006457//protein folding;GO:0042542//response to hydrogen peroxide;GO:0006366//transcription from RNA polymerase II promoter;GO:0000724//double-strand break repair via homologous recombination;GO:0009411//response to UV;GO:0006289//nucleotide-excision repair;GO:0009644//response to high light intensity;GO:0010212//response to ionizing radiation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0043687//post-translational protein modification","GO:0005515//protein binding;GO:0003677//DNA binding;GO:0004003//ATP-dependent DNA helicase activity;GO:0005524//ATP binding","GO:0005634//nucleus"]
[864,"CSE_Unigene17949","SW_Unigene18514","+","-","-",1710,{"v":0.993,"d":"99.30%"},12,10,2,{"v":0.0821987,"d":"0.082"},{"v":0.000166204,"d":"0.0002"},"gi|225447095|ref|XP_002273297.1|","PREDICTED: uncharacterized protein LOC100246609 [Vitis vinifera]","gi|359485503|ref|XM_002273261.2|","PREDICTED: Vitis vinifera uncharacterized LOC100246609 (LOC100246609), mRNA","-","-","COG5140","Ubiquitin fusion-degradation protein","K14016","olu:OSTLU_34773","ubiquitin fusion degradation protein 1","GO:0006511//ubiquitin-dependent protein catabolic process","GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[865,"CSE_Unigene18113","SW_Unigene1124","+","-","-",2040,{"v":0.994,"d":"99.40%"},13,3,10,{"v":1.11425,"d":"1.114"},{"v":0.976721,"d":"0.9767"},"gi|225456134|ref|XP_002278278.1|","PREDICTED: golgin candidate 2-like [Vitis vinifera]","gi|225456133|ref|XM_002278242.1|","PREDICTED: Vitis vinifera golgin candidate 2-like (LOC100266441), mRNA","sp|B0F9L7|GOGC2_ARATH","Golgin candidate 2 OS=Arabidopsis thaliana GN=GC2 PE=1 SV=1","COG1196","Chromosome segregation ATPases","K13172","bdi:100822512","serine/arginine repetitive matrix protein 2","GO:0009630//gravitropism","-","GO:0005794//Golgi apparatus"]
[866,"CSE_Unigene18264","SW_Unigene8543","+","-","-",864,{"v":0.997,"d":"99.70%"},3,2,1,{"v":0.168632,"d":"0.169"},{"v":0.143461,"d":"0.1435"},"gi|225463323|ref|XP_002268264.1|","PREDICTED: protein TIC 22-like, chloroplastic [Vitis vinifera]","gi|359477960|ref|XM_002268228.2|","PREDICTED: Vitis vinifera protein TIC 22-like, chloroplastic (LOC100245330), mRNA","sp|F4J469|TI22L_ARATH","Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana GN=TIC22L PE=3 SV=1","-","-","-","-","-","-","-","GO:0009941//chloroplast envelope"]
[867,"CSE_Unigene18324","SW_Unigene18680","+","-","-",1170,{"v":0.992,"d":"99.20%"},9,5,4,{"v":0.311324,"d":"0.311"},{"v":0.0771802,"d":"0.0772"},"gi|359474015|ref|XP_002269627.2|","PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]","gi|359474014|ref|XM_002269591.2|","PREDICTED: Vitis vinifera RNA-binding protein NOB1-like (LOC100258154), mRNA","-","-","COG1439","Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module","K11883","vvi:100258154","RNA-binding protein NOB1","GO:0006606//protein import into nucleus;GO:0009553//embryo sac development;GO:0000469//cleavage involved in rRNA processing;GO:0009555//pollen development","GO:0004521//endoribonuclease activity","GO:0005737//cytoplasm;GO:0005634//nucleus"]
[868,"CSE_Unigene18339","SW_CL4469_Contig1","+","-","-",1746,{"v":0.985,"d":"98.50%"},27,12,15,{"v":0.481059,"d":"0.481"},{"v":0.080683,"d":"0.0807"},"gi|359480018|ref|XP_002273034.2|","PREDICTED: structural maintenance of chromosomes protein 1A-like [Vitis vinifera]","gi|359480017|ref|XM_002272998.2|","PREDICTED: Vitis vinifera structural maintenance of chromosomes protein 1A-like (LOC100263447), mRNA","sp|Q6Q1P4|SMC1_ARATH","Structural maintenance of chromosomes protein 1 OS=Arabidopsis thaliana GN=SMC1 PE=2 SV=2","COG1196","Chromosome segregation ATPases","K06636","vvi:100263447","structural maintenance of chromosome 1","GO:0000278//mitotic cell cycle;GO:0009630//gravitropism;GO:0006346//methylation-dependent chromatin silencing;GO:0016246//RNA interference;GO:0045492//xylan biosynthetic process;GO:0010638//positive regulation of organelle organization;GO:0006310//DNA recombination;GO:0033044//regulation of chromosome organization;GO:0009855//determination of bilateral symmetry;GO:0030261//chromosome condensation;GO:0006396//RNA processing;GO:0010413//glucuronoxylan metabolic process;GO:0009887//organ morphogenesis;GO:0010014//meristem initiation;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0007062//sister chromatid cohesion;GO:0010073//meristem maintenance;GO:0006281//DNA repair","GO:0005215//transporter activity;GO:0005524//ATP binding","GO:0009507//chloroplast;GO:0005634//nucleus;GO:0008278//cohesin complex"]
[869,"CSE_Unigene18562","SW_Unigene17242","+","-","-",906,{"v":0.993,"d":"99.30%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|225455559|ref|XP_002267474.1|","PREDICTED: probable rRNA-processing protein EBP2 homolog [Vitis vinifera]","gi|225455558|ref|XM_002267438.1|","PREDICTED: Vitis vinifera probable rRNA-processing protein EBP2 homolog (LOC100249807), mRNA","sp|Q9LUJ5|EBP2_ARATH","Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1","COG0532","Translation initiation factor 2 (IF-2; GTPase)","K14823","vvi:100249807","rRNA-processing protein EBP2","GO:0001510//RNA methylation;GO:0055114//oxidation-reduction process;GO:0006606//protein import into nucleus;GO:0006626//protein targeting to mitochondrion","GO:0032440//2-alkenal reductase [NAD(P)] activity","GO:0005634//nucleus"]
[870,"CSE_Unigene18653","SW_Unigene308","+","-","-",2322,{"v":0.995,"d":"99.50%"},11,6,5,{"v":0.265108,"d":"0.265"},{"v":0.0293454,"d":"0.0293"},"gi|225456390|ref|XP_002280389.1|","PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera] >gi|297734457|emb|CBI15704.3| unnamed protein product [Vitis vinifera]","gi|225456389|ref|XM_002280353.1|","PREDICTED: Vitis vinifera SWI/SNF complex subunit SWI3A-like (LOC100250960), mRNA","sp|Q8W475|SWI3A_ARATH","SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1","COG5259","RSC chromatin remodeling complex subunit RSC8","K11649","vvi:100250960","SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C","GO:0040029//regulation of gene expression, epigenetic;GO:0009560//embryo sac egg cell differentiation","GO:0003677//DNA binding;GO:0003682//chromatin binding","GO:0005634//nucleus"]
[871,"CSE_Unigene18666","SW_Unigene22850","+","-","-",897,{"v":0.994,"d":"99.40%"},5,3,2,{"v":0.226803,"d":"0.227"},{"v":0.107391,"d":"0.1074"},"gi|359474007|ref|XP_002270348.2|","PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase-like [Vitis vinifera]","gi|359474006|ref|XM_002270312.2|","PREDICTED: Vitis vinifera UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase-like (LOC100242838), mRNA","-","-","COG0769","UDP-N-acetylmuramyl tripeptide synthase","K14306","rcu:RCOM_1609340","nuclear pore complex protein Nup62","GO:0006399//tRNA metabolic process;GO:0008360//regulation of cell shape;GO:0010020//chloroplast fission;GO:0009902//chloroplast relocation;GO:0051301//cell division;GO:0009252//peptidoglycan biosynthetic process;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0007049//cell cycle;GO:0010027//thylakoid membrane organization","GO:0008765//UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity;GO:0005524//ATP binding","GO:0009295//nucleoid;GO:0009507//chloroplast"]
[872,"CSE_Unigene18789","SW_Unigene8430","+","-","-",594,{"v":0.997,"d":"99.70%"},2,1,1,{"v":0.356995,"d":"0.357"},{"v":0.388963,"d":"0.3890"},"gi|359474749|ref|XP_002269181.2|","PREDICTED: uncharacterized protein LOC100263017 [Vitis vinifera]","gi|359474748|ref|XM_002269145.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263017 (LOC100263017), mRNA","-","-","-","-","K11714","osa:4338659","rhamnogalacturonan II specific xylosyltransferase [EC:2.4.2.-]","GO:0080147//root hair cell development;GO:0006486//protein glycosylation;GO:0052325//cell wall pectin biosynthetic process","GO:0052636//arabinosyltransferase activity","GO:0005768//endosome;GO:0005802//trans-Golgi network;GO:0005783//endoplasmic reticulum;GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[873,"CSE_Unigene18816","SW_Unigene19826","+","-","-",2121,{"v":0.991,"d":"99.10%"},19,8,11,{"v":0.503251,"d":"0.503"},{"v":0.18746,"d":"0.1875"},"gi|359476537|ref|XP_002268782.2|","PREDICTED: uncharacterized protein LOC100263926 [Vitis vinifera]","gi|359476536|ref|XM_002268746.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263926 (LOC100263926), mRNA","sp|Q84ZL0|FH5_ORYSJ","Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2","-","-","K13156","vvi:100263926","U11/U12 small nuclear ribonucleoprotein 48 kDa protein","-","-","-"]
[874,"CSE_Unigene18992","SW_Unigene8774","+","-","-",687,{"v":0.984,"d":"98.40%"},11,9,2,{"v":0.069762,"d":"0.070"},{"v":9.80036e-05,"d":"0.0001"},"gi|225434032|ref|XP_002273924.1|","PREDICTED: TBC1 domain family member 22B [Vitis vinifera] >gi|296084248|emb|CBI24636.3| unnamed protein product [Vitis vinifera]","gi|225434031|ref|XM_002273888.1|","PREDICTED: Vitis vinifera TBC1 domain family member 22B-like (LOC100242329), mRNA","-","-","COG5210","GTPase-activating protein","-","-","-","GO:0046686//response to cadmium ion;GO:0032851//positive regulation of Rab GTPase activity","GO:0005097//Rab GTPase activator activity","GO:0005794//Golgi apparatus"]
[875,"CSE_Unigene19162","SW_Unigene13481","+","-","-",1398,{"v":0.993,"d":"99.30%"},10,6,4,{"v":0.28267,"d":"0.283"},{"v":0.0461863,"d":"0.0462"},"gi|225447797|ref|XP_002266648.1|","PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Vitis vinifera] >gi|296081484|emb|CBI20007.3| unnamed protein product [Vitis vinifera]","gi|225447796|ref|XM_002266612.1|","PREDICTED: Vitis vinifera phytoene dehydrogenase, chloroplastic/chromoplastic-like (LOC100264044), mRNA","sp|P49086|CRTI_MAIZE","Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1","COG1233","Phytoene dehydrogenase and related proteins","K00231","zma:541866","oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]","GO:0010103//stomatal complex morphogenesis;GO:0016556//mRNA modification;GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity","GO:0009941//chloroplast envelope;GO:0005739//mitochondrion"]
[876,"CSE_Unigene1975","SW_Unigene8678","+","-","-",897,{"v":0.994,"d":"99.40%"},5,2,3,{"v":0.374265,"d":"0.374"},{"v":0.263067,"d":"0.2631"},"gi|225435108|ref|XP_002284515.1|","PREDICTED: nudix hydrolase 9-like [Vitis vinifera]","gi|225435107|ref|XM_002284479.1|","PREDICTED: Vitis vinifera nudix hydrolase 9-like (LOC100263857), mRNA","sp|Q8VYR2|NUDT9_ARATH","Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1","-","-","-","-","-","-","GO:0016787//hydrolase activity","GO:0005829//cytosol"]
[877,"CSE_Unigene19838","SW_CL2541_Contig2","+","-","-",1272,{"v":0.995,"d":"99.50%"},6,3,3,{"v":0.276003,"d":"0.276"},{"v":0.120566,"d":"0.1206"},"gi|225438801|ref|XP_002283225.1|","PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]","gi|359480678|ref|XM_002283189.2|","PREDICTED: Vitis vinifera tRNA-dihydrouridine synthase 1-like (LOC100249291), mRNA","sp|Q7XT07|DUS3L_ORYSJ","tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Oryza sativa subsp. japonica GN=Os04g0117600 PE=2 SV=2","COG0042","tRNA-dihydrouridine synthase","K05542","vvi:100249291","tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]","GO:0002943//tRNA dihydrouridine synthesis;GO:0006808//regulation of nitrogen utilization;GO:0055114//oxidation-reduction process","GO:0050660//flavin adenine dinucleotide binding;GO:0017150//tRNA dihydrouridine synthase activity","GO:0005739//mitochondrion"]
[878,"CSE_Unigene20110","SW_Unigene11422","+","-","-",198,{"v":0.98,"d":"98.00%"},4,3,1,{"v":0.0754013,"d":"0.075"},{"v":0.0218812,"d":"0.0219"},"gi|225446279|ref|XP_002269106.1|","PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Vitis vinifera] >gi|296090303|emb|CBI40122.3| unnamed protein product [Vitis vinifera]","gi|359484988|ref|XM_002269070.2|","PREDICTED: Vitis vinifera NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like (LOC100241945), mRNA","sp|Q9C9Z5|NDUA1_ARATH","NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana GN=At3g08610 PE=3 SV=1","-","-","K03945","vvi:100241945","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 1 [EC:1.6.5.3 1.6.99.3]","GO:0006511//ubiquitin-dependent protein catabolic process;GO:0051788//response to misfolded protein;GO:0080129//proteasome core complex assembly;GO:0009853//photorespiration","-","GO:0005747//mitochondrial respiratory chain complex I"]
[879,"CSE_Unigene20883","SW_Unigene11390","+","-","-",1902,{"v":0.988,"d":"98.80%"},23,14,9,{"v":0.230999,"d":"0.231"},{"v":0.00055671,"d":"0.0006"},"gi|225428782|ref|XP_002285205.1|","PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2 [Vitis vinifera] >gi|297741296|emb|CBI32427.3| unnamed protein product [Vitis vinifera]","gi|225428781|ref|XM_002285169.1|","PREDICTED: Vitis vinifera zinc-binding alcohol dehydrogenase domain-containing protein 2-like (LOC100258817), mRNA","sp|Q6WAU0|PULR_MENPI","(+)-pulegone reductase OS=Mentha piperita PE=1 SV=1","COG2130","Putative NADP-dependent oxidoreductases","K07119","vvi:100258817",null,"GO:0031348//negative regulation of defense response;GO:0006635//fatty acid beta-oxidation;GO:0009867//jasmonic acid mediated signaling pathway;GO:0009697//salicylic acid biosynthetic process;GO:0006833//water transport;GO:0009862//systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0010363//regulation of plant-type hypersensitive response;GO:0010310//regulation of hydrogen peroxide metabolic process;GO:0016045//detection of bacterium;GO:0010200//response to chitin;GO:0009651//response to salt stress;GO:0015706//nitrate transport;GO:0043900//regulation of multi-organism process;GO:0006612//protein targeting to membrane;GO:0050832//defense response to fungus;GO:0042742//defense response to bacterium;GO:0006972//hyperosmotic response;GO:0007030//Golgi organization;GO:0006096//glycolysis;GO:0000165//MAPK cascade;GO:0010167//response to nitrate;GO:0046686//response to cadmium ion;GO:0009266//response to temperature stimulus;GO:0006979//response to oxidative stress","GO:0008752//FMN reductase activity;GO:0008270//zinc ion binding;GO:0000166//nucleotide binding;GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups;GO:0003960//NADPH:quinone reductase activity;GO:0016404//15-hydroxyprostaglandin dehydrogenase (NAD+) activity","GO:0005777//peroxisome;GO:0005829//cytosol;GO:0009570//chloroplast stroma;GO:0005886//plasma membrane;GO:0005739//mitochondrion"]
[880,"CSE_Unigene209","SW_Unigene22064","+","-","-",3039,{"v":0.985,"d":"98.50%"},27,13,14,{"v":0.335834,"d":"0.336"},{"v":0.00502999,"d":"0.0050"},"gi|225436773|ref|XP_002267732.1|","PREDICTED: OTU domain-containing protein 6B isoform 2 [Vitis vinifera]","gi|359479755|ref|XM_002267696.2|","PREDICTED: Vitis vinifera OTU domain-containing protein 6B-like, transcript variant 2 (LOC100258001), mRNA","-","-","COG5539","Predicted cysteine protease (OTU family)","K13717","sbi:SORBI_06g032350","OTU domain-containing protein 3","GO:0006606//protein import into nucleus","GO:0008234//cysteine-type peptidase activity","GO:0005829//cytosol"]
[881,"CSE_Unigene21569","SW_Unigene10739","+","-","-",414,{"v":0.99,"d":"99.00%"},4,3,1,{"v":0.0880478,"d":"0.088"},{"v":0.0296296,"d":"0.0296"},"gi|225437408|ref|XP_002268380.1|","PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]","gi|359479916|ref|XM_002268344.2|","PREDICTED: Vitis vinifera uncharacterized LOC100246950 (LOC100246950), mRNA","sp|Q9LFA5|MED28_ARATH","Mediator of RNA polymerase II transcription subunit 28 OS=Arabidopsis thaliana GN=MED28 PE=1 SV=1","-","-","K15141","vvi:100246950","mediator of RNA polymerase II transcription subunit 28","-","-","GO:0016592//mediator complex"]
[882,"CSE_Unigene22020","SW_Unigene11011","+","-","-",402,{"v":0.995,"d":"99.50%"},2,"NA",2,"NA","NA","gi|297739785|emb|CBI29967.3|","unnamed protein product [Vitis vinifera]","gi|225441556|ref|XM_002276575.1|","PREDICTED: Vitis vinifera histone-lysine N-methyltransferase ATXR4-like (LOC100267482), mRNA","sp|Q9FG08|ATXR4_ARATH","Histone-lysine N-methyltransferase ATXR4 OS=Arabidopsis thaliana GN=ATXR4 PE=2 SV=2","-","-","K11426","ota:Ot04g04600","SET and MYND domain-containing protein","-","-","GO:0005634//nucleus;GO:0005739//mitochondrion"]
[883,"CSE_Unigene24772","SW_Unigene30623","+","-","-",1332,{"v":0.994,"d":"99.40%"},8,4,4,{"v":0.364869,"d":"0.365"},{"v":0.139909,"d":"0.1399"},"gi|225431509|ref|XP_002274967.1|","PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera] >gi|296088566|emb|CBI37557.3| unnamed protein product [Vitis vinifera]","gi|225431508|ref|XM_002274931.1|","PREDICTED: Vitis vinifera chromatin assembly factor 1 subunit B-like (LOC100245389), mRNA","sp|Q9SXY1|FAS2_ARATH","Chromatin assembly factor 1 subunit FAS2 OS=Arabidopsis thaliana GN=FAS2 PE=1 SV=1","COG2319","FOG: WD40 repeat","K10751","vvi:100245389","chromatin assembly factor 1 subunit B","GO:0010026//trichome differentiation;GO:0031507//heterochromatin assembly;GO:0009933//meristem structural organization;GO:0006355//regulation of transcription, DNA-dependent;GO:0000724//double-strand break repair via homologous recombination;GO:0009555//pollen development;GO:0048366//leaf development;GO:0006334//nucleosome assembly;GO:0008283//cell proliferation","GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0033186//CAF-1 complex;GO:0005634//nucleus"]
[884,"CSE_Unigene24835","SW_Unigene30671","+","-","-",354,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|359466799|gb|AEV46830.1|","sirtuin 1 [Vitis vinifera]","gi|359466798|gb|JN252254.1|","Vitis vinifera sirtuin 1 (SRT1) mRNA, complete cds","sp|Q9FE17|SIR1_ARATH","NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1","COG0846","NAD-dependent protein deacetylases, SIR2 family","K11416","vvi:100261752","mono-ADP-ribosyltransferase sirtuin 6 [EC:2.4.2.31]","GO:0006476//protein deacetylation;GO:0006342//chromatin silencing","GO:0008270//zinc ion binding;GO:0070403//NAD+ binding;GO:0003677//DNA binding","GO:0005677//chromatin silencing complex;GO:0005737//cytoplasm"]
[885,"CSE_Unigene29013","SW_Unigene27387","+","-","-",378,{"v":0.979,"d":"97.90%"},8,5,3,{"v":0.16153,"d":"0.162"},{"v":0.0141963,"d":"0.0142"},"gi|359483005|ref|XP_002285327.2|","PREDICTED: (6-4)DNA photolyase [Vitis vinifera]","gi|359483004|ref|XM_002285291.2|","PREDICTED: Vitis vinifera (6-4)DNA photolyase-like (LOC100256713), mRNA","sp|O48652|UVR3_ARATH","(6-4)DNA photolyase OS=Arabidopsis thaliana GN=UVR3 PE=1 SV=2","COG0415","Deoxyribodipyrimidine photolyase","K02295","vvi:100256713","cryptochrome","GO:0009411//response to UV;GO:0006281//DNA repair","GO:0003677//DNA binding;GO:0003904//deoxyribodipyrimidine photo-lyase activity;GO:0003914//DNA (6-4) photolyase activity;GO:0000166//nucleotide binding","GO:0009507//chloroplast;GO:0005634//nucleus"]
[886,"CSE_Unigene29792","SW_Unigene7299","+","-","-",231,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225446054|ref|XP_002268968.1|","PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]","gi|225446053|ref|XM_002268932.1|","PREDICTED: Vitis vinifera DNA repair protein XRCC3 homolog-like (LOC100251380), mRNA","sp|Q9FKM5|XRCC3_ARATH","DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana GN=XRCC3 PE=1 SV=1","-","-","K10880","vvi:100251380","DNA-repair protein XRCC3","GO:0006312//mitotic recombination;GO:0007131//reciprocal meiotic recombination;GO:0045132//meiotic chromosome segregation;GO:0045003//double-strand break repair via synthesis-dependent strand annealing;GO:0042138//meiotic DNA double-strand break formation;GO:0010212//response to ionizing radiation;GO:0007129//synapsis;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0043687//post-translational protein modification;GO:0007062//sister chromatid cohesion","GO:0008094//DNA-dependent ATPase activity;GO:0005515//protein binding;GO:0003684//damaged DNA binding;GO:0003697//single-stranded DNA binding;GO:0005524//ATP binding","GO:0005737//cytoplasm"]
[887,"CSE_Unigene352","SW_Unigene980","+","-","-",366,{"v":0.973,"d":"97.30%"},10,{"v":5.84281,"d":"6"},{"v":4.15719,"d":"4"},{"v":0.255742,"d":"0.256"},{"v":0.0282557,"d":"0.0283"},"gi|225454569|ref|XP_002263375.1|","PREDICTED: UPF0426 protein At1g28150, chloroplastic [Vitis vinifera] >gi|297737204|emb|CBI26405.3| unnamed protein product [Vitis vinifera]","gi|349712332|emb|FQ396604.1|","Vitis vinifera clone SS0AEB9YG15","sp|Q9FZ89|Y1815_ARATH","UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=1 SV=1","-","-","-","-","-","-","-","GO:0016020//membrane;GO:0010287//plastoglobule"]
[888,"CSE_Unigene37","SW_Unigene6586","+","-","-",1650,{"v":0.996,"d":"99.60%"},6,3,3,{"v":0.342425,"d":"0.342"},{"v":0.178024,"d":"0.1780"},"gi|225449917|ref|XP_002268974.1|","PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis vinifera] >gi|296081305|emb|CBI17749.3| unnamed protein product [Vitis vinifera]","gi|359495093|ref|XM_002268938.2|","PREDICTED: Vitis vinifera ubiquitin carboxyl-terminal hydrolase 24-like (LOC100261998), mRNA","sp|Q9FPS3|UBP24_ARATH","Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1","COG5533","Ubiquitin C-terminal hydrolase","K11841","vvi:100261998","ubiquitin carboxyl-terminal hydrolase 10 [EC:3.1.2.15]","GO:0006511//ubiquitin-dependent protein catabolic process","GO:0004221//ubiquitin thiolesterase activity;GO:0008234//cysteine-type peptidase activity","GO:0005634//nucleus;GO:0009536//plastid"]
[889,"CSE_Unigene3947","SW_CL7762_Contig1","+","-","-",1116,{"v":0.994,"d":"99.40%"},7,3,4,{"v":0.489382,"d":"0.489"},{"v":0.284174,"d":"0.2842"},"gi|296081397|emb|CBI16830.3|","unnamed protein product [Vitis vinifera]","gi|147798311|emb|AM458711.2|","Vitis vinifera contig VV78X211217.5, whole genome shotgun sequence","-","-","COG2515","1-aminocyclopropane-1-carboxylate deaminase","K01505","olu:OSTLU_28382","1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]","GO:0008152//metabolic process","GO:0030170//pyridoxal phosphate binding;GO:0003824//catalytic activity","-"]
[890,"CSE_Unigene461","SW_CL6244_Contig2","+","-","-",1149,{"v":0.985,"d":"98.50%"},11,6,5,{"v":0.328025,"d":"0.328"},{"v":0.0613087,"d":"0.0613"},"gi|359489285|ref|XP_002272856.2|","PREDICTED: uncharacterized protein LOC100249550 [Vitis vinifera]","gi|359489284|ref|XM_002272820.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249550 (LOC100249550), mRNA","sp|Q7Y180|AN322_ORYSJ","Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Oryza sativa subsp. japonica GN=Os03g0668900 PE=2 SV=1","-","-","K14782","vvi:100249550","protein AATF/BFR2","-","-","GO:0005634//nucleus"]
[891,"CSE_Unigene4785","SW_Unigene6983","+","-","-",354,{"v":0.997,"d":"99.70%"},1,"NA",1,"NA","NA","gi|359481669|ref|XP_002274396.2|","PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis vinifera] >gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vinifera]","gi|359481668|ref|XM_002274360.2|","PREDICTED: Vitis vinifera 30S ribosomal protein S31, chloroplastic-like (LOC100258002), mRNA","sp|O80439|RR31_ARATH","30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana GN=RPS31 PE=1 SV=1","-","-","-","-","-","GO:0032544//plastid translation","GO:0003735//structural constituent of ribosome","GO:0005840//ribosome;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[892,"CSE_Unigene4843","SW_Unigene30558","+","-","-",567,{"v":0.996,"d":"99.60%"},2,1,1,{"v":0.316614,"d":"0.317"},{"v":0.366531,"d":"0.3665"},"gi|225425110|ref|XP_002272919.1|","PREDICTED: TIMELESS-interacting protein [Vitis vinifera] >gi|297738277|emb|CBI27478.3| unnamed protein product [Vitis vinifera]","gi|225425109|ref|XM_002272883.1|","PREDICTED: Vitis vinifera TIMELESS-interacting protein-like (LOC100240999), mRNA","-","-","-","-","K10904","vvi:100240999","TIMELESS-interacting protein","GO:0051726//regulation of cell cycle;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0048478//replication fork protection;GO:0006270//DNA replication initiation;GO:0006974//response to DNA damage stimulus","GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding","GO:0005634//nucleus"]
[893,"CSE_Unigene4910","SW_Unigene24896","+","-","-",225,{"v":0.982,"d":"98.20%"},4,{"v":2.73933,"d":"3"},{"v":1.26067,"d":"1"},{"v":0.13723,"d":"0.137"},{"v":0.0390912,"d":"0.0391"},"gi|359475374|ref|XP_003631671.1|","PREDICTED: uncharacterized protein LOC100854865 [Vitis vinifera] >gi|297741288|emb|CBI32419.3| unnamed protein product [Vitis vinifera]","gi|359475373|ref|XM_003631623.1|","PREDICTED: Vitis vinifera uncharacterized LOC100854865 (LOC100854865), mRNA","sp|Q93YN0|SCO2_ARATH","Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1","-","-","-","-","-","GO:0006457//protein folding;GO:0009658//chloroplast organization","GO:0043621//protein self-association;GO:0003756//protein disulfide isomerase activity","GO:0009535//chloroplast thylakoid membrane"]
[894,"CSE_Unigene498","SW_CL7536_Contig2","+","-","-",699,{"v":0.983,"d":"98.30%"},12,4,8,{"v":0.398912,"d":"0.399"},{"v":0.126606,"d":"0.1266"},"gi|147770311|emb|CAN66988.1|","hypothetical protein VITISV_005164 [Vitis vinifera]","gi|349731268|emb|FQ394390.1|","Vitis vinifera clone SS0AFA21YA15","-","-","COG2939","Carboxypeptidase C (cathepsin A)","K15559","ota:Ot05g02000","regulator of Ty1 transposition protein 103","GO:0006333//chromatin assembly or disassembly;GO:0000398//mRNA splicing, via spliceosome;GO:0001510//RNA methylation","-","GO:0005634//nucleus"]
[895,"CSE_Unigene5072","SW_Unigene2123","+","-","-",423,{"v":0.9,"d":"90.00%"},7,6,1,{"v":0.0456455,"d":"0.046"},{"v":0.000603209,"d":"0.0006"},"gi|147865780|emb|CAN81146.1|","hypothetical protein VITISV_020811 [Vitis vinifera]","gi|225432190|ref|XM_002275061.1|","PREDICTED: Vitis vinifera tRNA pseudouridine synthase A 1-like (LOC100254503), mRNA","-","-","COG0101","Pseudouridylate synthase","K06173","vvi:100254503","tRNA pseudouridine38-40 synthase [EC:5.4.99.12]","GO:0001522//pseudouridine synthesis;GO:0006730//one-carbon metabolic process;GO:0008033//tRNA processing","GO:0009982//pseudouridine synthase activity;GO:0003723//RNA binding","GO:0009507//chloroplast"]
[896,"CSE_Unigene5409","SW_Unigene20475","+","-","-",294,{"v":0.983,"d":"98.30%"},5,2,3,{"v":0.496159,"d":"0.496"},{"v":0.366914,"d":"0.3669"},"gi|147856839|emb|CAN83475.1|","hypothetical protein VITISV_004799 [Vitis vinifera]","gi|225446925|ref|XM_002267049.1|","PREDICTED: Vitis vinifera uncharacterized LOC100265407 (LOC100265407), mRNA","-","-","COG0456","Acetyltransferases","K00670","cme:CMS482C","peptide alpha-N-acetyltransferase [EC:2.3.1.88]","GO:0008152//metabolic process","GO:0008080//N-acetyltransferase activity","GO:0005737//cytoplasm"]
[897,"CSE_Unigene5433","SW_Unigene23811","+","-","-",1038,{"v":0.995,"d":"99.50%"},5,4,1,{"v":0.0944422,"d":"0.094"},{"v":0.0208343,"d":"0.0208"},"gi|225454007|ref|XP_002280748.1|","PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera] >gi|296089196|emb|CBI38899.3| unnamed protein product [Vitis vinifera]","gi|225454006|ref|XM_002280712.1|","PREDICTED: Vitis vinifera DNA repair protein RAD51 homolog 3-like (LOC100267711), mRNA","sp|Q8GXF0|RA51C_ARATH","DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2","COG0468","RecA/RadA recombinase","K10870","vvi:100267711","RAD51-like protein 2","GO:0000278//mitotic cell cycle;GO:0031047//gene silencing by RNA;GO:0006275//regulation of DNA replication;GO:0007131//reciprocal meiotic recombination;GO:0006261//DNA-dependent DNA replication;GO:0007143//female meiosis;GO:0045003//double-strand break repair via synthesis-dependent strand annealing;GO:0009560//embryo sac egg cell differentiation;GO:0006306//DNA methylation;GO:0006396//RNA processing;GO:0016444//somatic cell DNA recombination;GO:0051726//regulation of cell cycle;GO:0009555//pollen development;GO:0007140//male meiosis;GO:0010212//response to ionizing radiation;GO:0007129//synapsis;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0043687//post-translational protein modification;GO:0016568//chromatin modification;GO:0006626//protein targeting to mitochondrion","GO:0008094//DNA-dependent ATPase activity;GO:0005515//protein binding;GO:0003684//damaged DNA binding;GO:0003697//single-stranded DNA binding;GO:0000150//recombinase activity;GO:0005524//ATP binding","-"]
[898,"CSE_Unigene580","SW_Unigene10482","+","-","-",909,{"v":0.992,"d":"99.20%"},7,7,"NA",{"v":0,"d":"0.000"},"NA","gi|225427601|ref|XP_002270881.1|","PREDICTED: F-box protein SKIP31 [Vitis vinifera] >gi|296085460|emb|CBI29192.3| unnamed protein product [Vitis vinifera]","gi|359474724|ref|XM_002270845.2|","PREDICTED: Vitis vinifera F-box protein SKIP31-like (LOC100259709), mRNA","sp|Q9FHK0|SKI31_ARATH","F-box protein SKIP31 OS=Arabidopsis thaliana GN=SKIP31 PE=1 SV=1","-","-","-","-","-","-","-","GO:0016023//cytoplasmic membrane-bounded vesicle"]
[899,"CSE_Unigene5940","SW_Unigene12488","+","-","-",1068,{"v":0.993,"d":"99.30%"},7,4,3,{"v":0.243475,"d":"0.243"},{"v":0.0666847,"d":"0.0667"},"gi|147814819|emb|CAN74746.1|","hypothetical protein VITISV_012024 [Vitis vinifera]","gi|123712040|emb|AM463855.1|","Vitis vinifera contig VV78X242303.5, whole genome shotgun sequence","sp|Q5XET4|PP142_ARATH","Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN=EMB975 PE=2 SV=1","-","-","-","-","-","-","-","GO:0005739//mitochondrion"]
[900,"CSE_Unigene7044","SW_CL545_Contig1","+","-","-",600,{"v":0.985,"d":"98.50%"},9,4,5,{"v":0.500507,"d":"0.501"},{"v":0.240143,"d":"0.2401"},"gi|147766885|emb|CAN67530.1|","hypothetical protein VITISV_004311 [Vitis vinifera]","gi|225447712|ref|XM_002277055.1|","PREDICTED: Vitis vinifera frataxin, mitochondrial-like, transcript variant 1 (LOC100252899), mRNA","sp|Q9ZR07|FRDA_ARATH","Frataxin, mitochondrial OS=Arabidopsis thaliana GN=FH PE=2 SV=2","COG1965","Protein implicated in iron transport, frataxin homolog","-","-","-","GO:0016226//iron-sulfur cluster assembly;GO:0051301//cell division;GO:0009060//aerobic respiration;GO:0048825//cotyledon development;GO:0042542//response to hydrogen peroxide","GO:0008199//ferric iron binding;GO:0004322//ferroxidase activity","GO:0005739//mitochondrion"]
[901,"CSE_Unigene7294","SW_Unigene7220","+","-","-",789,{"v":0.996,"d":"99.60%"},3,2,1,{"v":0.162242,"d":"0.162"},{"v":0.137004,"d":"0.1370"},"gi|297739855|emb|CBI30037.3|","unnamed protein product [Vitis vinifera]","gi|359482184|ref|XM_002275189.2|","PREDICTED: Vitis vinifera coiled-coil domain-containing protein 75-like (LOC100246967), mRNA","-","-","-","-","K13094","vvi:100250662","RNA-binding protein 5/10","-","GO:0003676//nucleic acid binding","GO:0005634//nucleus"]
[902,"CSE_Unigene806","SW_Unigene22536","+","-","-",393,{"v":0.992,"d":"99.20%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225458948|ref|XP_002285532.1|","PREDICTED: ergosterol biosynthetic protein 28 [Vitis vinifera] >gi|302142135|emb|CBI19338.3| unnamed protein product [Vitis vinifera]","gi|359493001|ref|XM_002285496.2|","PREDICTED: Vitis vinifera ergosterol biosynthetic protein 28-like (LOC100250651), mRNA","sp|O80594|ERG28_ARATH","Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=2","-","-","-","-","-","-","-","GO:0005739//mitochondrion;GO:0016021//integral to membrane"]
[903,"CSE_Unigene8502","SW_Unigene24308","+","-","-",555,{"v":0.987,"d":"98.70%"},7,3,4,{"v":0.400112,"d":"0.400"},{"v":0.207824,"d":"0.2078"},"gi|359473659|ref|XP_002271878.2|","PREDICTED: uracil-DNA glycosylase [Vitis vinifera]","gi|359473658|ref|XM_002271842.2|","PREDICTED: Vitis vinifera uracil-DNA glycosylase-like (LOC100253025), mRNA","-","-","COG0692","Uracil DNA glycosylase","K03648","vvi:100253025","uracil-DNA glycosylase [EC:3.2.2.27]","GO:0006284//base-excision repair;GO:0006261//DNA-dependent DNA replication","GO:0004844//uracil DNA N-glycosylase activity","GO:0009507//chloroplast;GO:0005739//mitochondrion"]
[904,"CSE_Unigene8522","SW_Unigene1836","+","-","-",876,{"v":0.993,"d":"99.30%"},6,{"v":3.83021,"d":"4"},{"v":2.16979,"d":"2"},{"v":0.189673,"d":"0.190"},{"v":0.0385112,"d":"0.0385"},"gi|225433682|ref|XP_002265776.1|","PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]","gi|225433681|ref|XM_002265740.1|","PREDICTED: Vitis vinifera fanconi-associated nuclease 1 homolog (LOC100261742), mRNA","sp|Q5XVJ4|FAN1_ARATH","Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana GN=At1g48360 PE=2 SV=2","-","-","K15363","vvi:100261742","fanconi-associated nuclease 1","GO:0090304","GO:0016818//hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;GO:0016788//hydrolase activity, acting on ester bonds;GO:0003676//nucleic acid binding;GO:0008270//zinc ion binding","GO:0005634//nucleus;GO:0005739//mitochondrion"]
[905,"CSE_Unigene8677","SW_Unigene13725","+","-","-",771,{"v":0.99,"d":"99.00%"},8,5,3,{"v":0.202303,"d":"0.202"},{"v":0.00455761,"d":"0.0046"},"gi|296087189|emb|CBI33563.3|","unnamed protein product [Vitis vinifera]","gi|349712183|emb|FQ391346.1|","Vitis vinifera clone SS0AEB14YP20","-","-","COG0223","Methionyl-tRNA formyltransferase","K00604","vvi:100265562","methionyl-tRNA formyltransferase [EC:2.1.2.9]","GO:0071951//conversion of methionyl-tRNA to N-formyl-methionyl-tRNA;GO:0006413//translational initiation;GO:0009152//purine ribonucleotide biosynthetic process","GO:0008864//formyltetrahydrofolate deformylase activity;GO:0004479//methionyl-tRNA formyltransferase activity","GO:0005739//mitochondrion"]
[906,"CSE_Unigene8691","SW_Unigene8658","+","-","-",477,{"v":0.996,"d":"99.60%"},2,"NA",2,"NA","NA","gi|296089207|emb|CBI38910.3|","unnamed protein product [Vitis vinifera]","gi|225454031|ref|XM_002274828.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262506 (LOC100262506), mRNA","sp|Q0IQB6|CML3_ORYSJ","Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1","-","-","-","-","-","-","-","-"]
[907,"CSE_Unigene8699","SW_Unigene6568","+","-","-",1143,{"v":0.991,"d":"99.10%"},10,1,9,{"v":4.12462,"d":"4.125"},{"v":0.162869,"d":"0.1629"},"gi|359478007|ref|XP_002268156.2|","PREDICTED: protein PRD1-like [Vitis vinifera]","gi|359478006|ref|XM_002268120.2|","PREDICTED: Vitis vinifera protein PRD1-like (LOC100248619), mRNA","sp|O23277|PRD1_ARATH","Protein PRD1 OS=Arabidopsis thaliana GN=PRD1 PE=1 SV=3","-","-","-","-","-","GO:0045132//meiotic chromosome segregation;GO:0051026//chiasma assembly;GO:0006302//double-strand break repair;GO:0006312//mitotic recombination;GO:0042138//meiotic DNA double-strand break formation;GO:0007062//sister chromatid cohesion;GO:0007131//reciprocal meiotic recombination","GO:0042803//protein homodimerization activity","GO:0009507//chloroplast"]
[908,"CSE_Unigene8703","SW_Unigene6906","+","-","-",378,{"v":0.992,"d":"99.20%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|297738678|emb|CBI27923.3|","unnamed protein product [Vitis vinifera]","gi|359484490|ref|XM_002282312.2|","PREDICTED: Vitis vinifera uncharacterized LOC100250844 (LOC100250844), mRNA","sp|Q94K18|Y4966_ARATH","Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1","-","-","-","-","-","GO:0009793//embryo development ending in seed dormancy","-","GO:0005739//mitochondrion"]
[909,"CSE_Unigene8924","SW_Unigene22365","+","-","-",834,{"v":0.996,"d":"99.60%"},3,1,2,{"v":0.639066,"d":"0.639"},{"v":0.551518,"d":"0.5515"},"gi|225443950|ref|XP_002272255.1|","PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera] >gi|297740766|emb|CBI30948.3| unnamed protein product [Vitis vinifera]","gi|225443949|ref|XM_002272219.1|","PREDICTED: Vitis vinifera uncharacterized LOC100256651 (LOC100256651), mRNA","sp|Q9M2D8|Y3126_ARATH","Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1","COG3064","Membrane protein involved in colicin uptake","K08818","vvi:100246062","cell division cycle 2-like [EC:2.7.11.22]","-","GO:0003677//DNA binding","GO:0005737//cytoplasm;GO:0005886//plasma membrane"]
[910,"CSE_Unigene9234","SW_Unigene23230","+","-","-",1143,{"v":0.987,"d":"98.70%"},15,7,8,{"v":0.348817,"d":"0.349"},{"v":0.0419582,"d":"0.0420"},"gi|225446184|ref|XP_002278148.1|","PREDICTED: uncharacterized protein LOC100261628 [Vitis vinifera] >gi|297735319|emb|CBI17759.3| unnamed protein product [Vitis vinifera]","gi|225446183|ref|XM_002278112.1|","PREDICTED: Vitis vinifera uncharacterized LOC100261628 (LOC100261628), mRNA","-","-","COG1720","Uncharacterized conserved protein","-","-","-","-","-","GO:0009507//chloroplast"]
[911,"CSE_Unigene9328","SW_Unigene14611","+","-","-",309,{"v":0.987,"d":"98.70%"},4,1,3,{"v":0.629542,"d":"0.630"},{"v":0.53581,"d":"0.5358"},"gi|297745567|emb|CBI40732.3|","unnamed protein product [Vitis vinifera]","gi|147865344|emb|AM486367.2|","Vitis vinifera contig VV78X200627.9, whole genome shotgun sequence","sp|O49436|PP327_ARATH","Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[912,"CSE_Unigene9332","SW_Unigene4133","+","-","-",1263,{"v":0.995,"d":"99.50%"},6,5,1,{"v":0.0624927,"d":"0.062"},{"v":0.00356397,"d":"0.0036"},"gi|359480543|ref|XP_002276839.2|","PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2-like [Vitis vinifera] >gi|296087308|emb|CBI33682.3| unnamed protein product [Vitis vinifera]","gi|359480542|ref|XM_002276803.2|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase-like 2-like (LOC100241654), mRNA","sp|Q9FJX0|PPIL2_ARATH","Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K10598","gmx:100785814","peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]","GO:0006457//protein folding;GO:0016567//protein ubiquitination;GO:0000413//protein peptidyl-prolyl isomerization","GO:0004842//ubiquitin-protein ligase activity;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0005634//nucleus;GO:0000151//ubiquitin ligase complex"]
[913,"CSE_Unigene9424","SW_Unigene8158","+","-","-",711,{"v":0.993,"d":"99.30%"},5,4,1,{"v":0.09478,"d":"0.095"},{"v":0.0210524,"d":"0.0211"},"gi|225429807|ref|XP_002282879.1|","PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Vitis vinifera] >gi|296081777|emb|CBI20782.3| unnamed protein product [Vitis vinifera]","gi|359476323|ref|XM_002282843.2|","PREDICTED: Vitis vinifera probable plastid-lipid-associated protein 8, chloroplastic-like (LOC100250934), mRNA","sp|Q941D3|PAP8_ARATH","Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1","-","-","-","-","-","GO:0019684//photosynthesis, light reaction;GO:0030003//cellular cation homeostasis;GO:0070838//divalent metal ion transport;GO:0019761//glucosinolate biosynthetic process;GO:0019344//cysteine biosynthetic process;GO:0035304//regulation of protein dephosphorylation","GO:0005198//structural molecule activity","GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid"]
[914,"CSE_Unigene9430","SW_Unigene8550","+","-","-",1122,{"v":0.996,"d":"99.60%"},5,2,3,{"v":0.585824,"d":"0.586"},{"v":0.431078,"d":"0.4311"},"gi|302142942|emb|CBI20237.3|","unnamed protein product [Vitis vinifera]","gi|359493809|ref|XM_002285218.2|","PREDICTED: Vitis vinifera reticulon-4-interacting protein 1, mitochondrial-like (LOC100252024), mRNA","sp|Q9ZUC1|QORL_ARATH","Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2","COG0604","NADPH:quinone reductase and related Zn-dependent oxidoreductases","K00344","gmx:100793768","NADPH2:quinone reductase [EC:1.6.5.5]","GO:0055114//oxidation-reduction process","GO:0000166//nucleotide binding;GO:0008270//zinc ion binding;GO:0003960//NADPH:quinone reductase activity","GO:0005739//mitochondrion"]
[915,"CSE_Unigene9613","SW_Unigene23601","+","-","-",786,{"v":0.992,"d":"99.20%"},6,1,5,{"v":1.35996,"d":"1.360"},{"v":0.764779,"d":"0.7648"},"gi|296085482|emb|CBI29214.3|","unnamed protein product [Vitis vinifera]","gi|359474760|ref|XM_002270467.2|","PREDICTED: Vitis vinifera alkylated DNA repair protein alkB homolog 8-like (LOC100252728), mRNA","-","-","COG3145","Alkylated DNA repair protein","K10770","mtr:MTR_5g026030","alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]","GO:0002098//tRNA wobble uridine modification;GO:0055114//oxidation-reduction process","GO:0003676//nucleic acid binding;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0005739//mitochondrion"]
[916,"CSE_Unigene9620","SW_CL3803_Contig2","+","-","-",450,{"v":0.998,"d":"99.80%"},1,"NA",1,"NA","NA","gi|225464442|ref|XP_002265373.1|","PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH6 [Vitis vinifera] >gi|296081091|emb|CBI18285.3| unnamed protein product [Vitis vinifera]","gi|225464441|ref|XM_002265337.1|","PREDICTED: Vitis vinifera probable alpha-ketoglutarate-dependent dioxygenase ABH6-like (LOC100252488), mRNA","-","-","-","-","K10768","vvi:100252488","alkylated DNA repair protein alkB homolog 6 [EC:1.14.11.-]","GO:0055114//oxidation-reduction process","GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","-"]
[917,"CSE_Unigene9654","SW_Unigene22143","+","-","-",252,{"v":0.992,"d":"99.20%"},2,1,1,{"v":0.369399,"d":"0.369"},{"v":0.396578,"d":"0.3966"},"gi|255580651|ref|XP_002531148.1|","Protein preY, mitochondrial precursor, putative [Ricinus communis] >gi|223529261|gb|EEF31233.1| Protein preY, mitochondrial precursor, putative [Ricinus communis]","gi|123699896|emb|AM431989.1|","Vitis vinifera contig VV78X223775.19, whole genome shotgun sequence","-","-","COG2835","Uncharacterized conserved protein","-","-","-","-","-","GO:0005739//mitochondrion"]
[918,"CSE_Unigene9712","SW_Unigene8312","+","-","-",279,{"v":0.996,"d":"99.60%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|225431595|ref|XP_002282721.1|","PREDICTED: uncharacterized protein LOC100245396 isoform 1 [Vitis vinifera] >gi|296088614|emb|CBI37605.3| unnamed protein product [Vitis vinifera]","gi|225431594|ref|XM_002282685.1|","PREDICTED: Vitis vinifera bolA-like protein 2, transcript variant 1 (LOC100245396), mRNA","sp|Q84W65|SUFE_ARATH","SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374 PE=1 SV=2","COG0271","Stress-induced morphogen (activity unknown)","K05527","osa:4325073","BolA protein","GO:0006301//postreplication repair","-","GO:0005576//extracellular region"]
[919,"CSE_Unigene9793","SW_Unigene7169","+","-","-",717,{"v":0.992,"d":"99.20%"},6,3,3,{"v":0.330536,"d":"0.331"},{"v":0.167957,"d":"0.1680"},"gi|359496744|ref|XP_002272328.2|","PREDICTED: IMPACT family member in pol 5&apos;region-like [Vitis vinifera] >gi|297742808|emb|CBI35524.3| unnamed protein product [Vitis vinifera]","gi|359495662|ref|XM_003635003.1|","PREDICTED: Vitis vinifera IMPACT family member in pol 5'region-like (LOC100853398), mRNA","-","-","COG1739","Uncharacterized conserved protein","-","-","-","-","-","-"]
[920,"CSE_Unigene9845","SW_CL5933_Contig4","+","-","-",798,{"v":0.999,"d":"99.90%"},1,"NA",1,"NA","NA","gi|225437691|ref|XP_002272765.1|","PREDICTED: tRNA guanosine-2&apos;-O-methyltransferase TRM13 homolog [Vitis vinifera]","gi|225437690|ref|XM_002272729.1|","PREDICTED: Vitis vinifera tRNA guanosine-2'-O-methyltransferase TRM13 homolog (LOC100248556), mRNA","-","-","-","-","K15446","vvi:100248556","tRNA guanosine-2'-O-methyltransferase TRM13 [EC:2.1.1.-]","GO:0032259//methylation;GO:0008033//tRNA processing","GO:0008168//methyltransferase activity","GO:0005634//nucleus"]
[921,"CSE_CL2463_Contig1","SW_CL3327_Contig2","-","+","-",825,{"v":0.988,"d":"98.80%"},10,4,6,{"v":0.538904,"d":"0.539"},{"v":0.260251,"d":"0.2603"},"gi|225435488|ref|XP_002285513.1|","PREDICTED: zinc transporter ZTP29 [Vitis vinifera] >gi|297746349|emb|CBI16405.3| unnamed protein product [Vitis vinifera]","gi|359478393|ref|XM_002285477.2|","PREDICTED: Vitis vinifera zinc transporter ZTP29-like (LOC100250064), mRNA","sp|Q940Q3|ZTP29_ARATH","Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1","COG0428","Predicted divalent heavy-metal cations transporter","K07238","vvi:100250064","zinc transporter, ZIP family","GO:0030001//metal ion transport;GO:0055085//transmembrane transport","GO:0046873//metal ion transmembrane transporter activity","GO:0005886//plasma membrane"]
[922,"CSE_CL2535_Contig1","SW_Unigene12500","-","+","-",1821,{"v":0.995,"d":"99.50%"},6,3,3,{"v":0.275769,"d":"0.276"},{"v":0.120274,"d":"0.1203"},"gi|296083495|emb|CBI23464.3|","unnamed protein product [Vitis vinifera]","gi|359496487|ref|XM_003635199.1|","PREDICTED: Vitis vinifera uncharacterized LOC100854867 (LOC100854867), mRNA","sp|P93471|COP1_PEA","E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1","COG5222","Uncharacterized conserved protein, contains RING Zn-finger","K15541","mtr:MTR_5g098230","protein MPE1","-","GO:0008270//zinc ion binding;GO:0016829//lyase activity;GO:0003676//nucleic acid binding","GO:0005634//nucleus"]
[923,"CSE_CL2638_Contig1","SW_CL7349_Contig2","-","+","-",1818,{"v":0.992,"d":"99.20%"},12,7,5,{"v":0.243754,"d":"0.244"},{"v":0.0161227,"d":"0.0161"},"gi|359494535|ref|XP_002266085.2|","PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis vinifera]","gi|359494534|ref|XM_002266049.2|","PREDICTED: Vitis vinifera peptidyl-prolyl cis-trans isomerase-like 4-like (LOC100266806), mRNA","sp|Q9FJX0|PPIL2_ARATH","Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K12735","vvi:100266806","peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]","GO:0006457//protein folding;GO:0000398//mRNA splicing, via spliceosome;GO:0000413//protein peptidyl-prolyl isomerization","GO:0003723//RNA binding;GO:0005515//protein binding;GO:0008270//zinc ion binding;GO:0003755//peptidyl-prolyl cis-trans isomerase activity;GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0005829//cytosol"]
[924,"CSE_CL2642_Contig1","SW_CL5062_Contig1","-","+","-",675,{"v":0.991,"d":"99.10%"},6,6,"NA",{"v":0,"d":"0.000"},"NA","gi|359472811|ref|XP_003631196.1|","PREDICTED: ureide permease 2-like [Vitis vinifera]","gi|359472810|ref|XM_003631148.1|","PREDICTED: Vitis vinifera ureide permease 2-like (LOC100252466), mRNA","sp|Q9ZQ89|UPS2_ARATH","Ureide permease 2 OS=Arabidopsis thaliana GN=UPS2 PE=2 SV=2","-","-","-","-","-","GO:0015720//allantoin transport;GO:0015857//uracil transport;GO:0015931//nucleobase-containing compound transport;GO:0042906//xanthine transport","GO:0042907//xanthine transmembrane transporter activity;GO:0005274//allantoin uptake transmembrane transporter activity;GO:0015505//uracil:cation symporter activity","GO:0005886//plasma membrane;GO:0009507//chloroplast"]
[925,"CSE_CL3380_Contig1","SW_Unigene5238","-","+","-",1326,{"v":0.977,"d":"97.70%"},22,7,15,{"v":0.811143,"d":"0.811"},{"v":0.633625,"d":"0.6336"},"gi|225463974|ref|XP_002268548.1|","PREDICTED: uncharacterized protein LOC100256476 [Vitis vinifera]","gi|359488012|ref|XM_002268512.2|","PREDICTED: Vitis vinifera uncharacterized LOC100256476 (LOC100256476), mRNA","sp|Q9FFW5|PERK8_ARATH","Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1","-","-","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0016556//mRNA modification;GO:0010103//stomatal complex morphogenesis;GO:0000023//maltose metabolic process;GO:0019252//starch biosynthetic process;GO:0043085//positive regulation of catalytic activity","-","GO:0009570//chloroplast stroma"]
[926,"CSE_CL6339_Contig1","SW_Unigene19804","-","+","-",1857,{"v":0.976,"d":"97.60%"},42,25,17,{"v":0.228293,"d":"0.228"},{"v":6.80094e-07,"d":"0.0000"},"gi|296087190|emb|CBI33564.3|","unnamed protein product [Vitis vinifera]","gi|225453103|ref|XM_002270423.1|","PREDICTED: Vitis vinifera uncharacterized LOC100263780 (LOC100263780), mRNA","sp|Q84K34|SIL10_ARATH","E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1","-","-","K10802","smo:SELMODRAFT_175895","high mobility group protein B1","GO:0007275//multicellular organismal development;GO:0016567//protein ubiquitination;GO:0006511//ubiquitin-dependent protein catabolic process","GO:0003677//DNA binding;GO:0004842//ubiquitin-protein ligase activity;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[927,"CSE_CL7642_Contig1","SW_CL7975_Contig1","-","+","-",897,{"v":0.982,"d":"98.20%"},16,11,5,{"v":0.162315,"d":"0.162"},{"v":0.000510013,"d":"0.0005"},"gi|225447131|ref|XP_002274696.1|","PREDICTED: uncharacterized protein LOC100244748 [Vitis vinifera]","gi|359485516|ref|XM_002274660.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244748 (LOC100244748), mRNA","-","-","-","-","-","-","-","GO:0007067//mitosis;GO:0000910//cytokinesis;GO:0007020//microtubule nucleation","GO:0003676//nucleic acid binding;GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0005634//nucleus"]
[928,"CSE_CL890_Contig2","SW_Unigene19040","-","+","-",1359,{"v":0.993,"d":"99.30%"},10,5,5,{"v":0.308587,"d":"0.309"},{"v":0.0637744,"d":"0.0638"},"gi|359481103|ref|XP_002263641.2|","PREDICTED: trafficking protein particle complex subunit 8-like [Vitis vinifera]","gi|359481102|ref|XM_002263605.2|","PREDICTED: Vitis vinifera trafficking protein particle complex subunit 8-like (LOC100248747), mRNA","-","-","-","-","K11268","gmx:100811441","N-acetyltransferase [EC:2.3.1.-]","GO:0016926//protein desumoylation;GO:0050665//hydrogen peroxide biosynthetic process;GO:0010228//vegetative to reproductive phase transition of meristem","-","GO:0005794//Golgi apparatus;GO:0009536//plastid"]
[929,"CSE_Unigene10204","SW_Unigene9715","-","+","-",585,{"v":0.991,"d":"99.10%"},5,4,1,{"v":0.0819162,"d":"0.082"},{"v":0.0144441,"d":"0.0144"},"gi|297734076|emb|CBI15323.3|","unnamed protein product [Vitis vinifera]","gi|349726455|emb|FQ382665.1|","Vitis vinifera clone SS0ABG49YC17","-","-","COG0705","Uncharacterized membrane protein (homolog of Drosophila rhomboid)","K09650","cme:CMP210C","rhomboid-like protein [EC:3.4.21.105]","GO:0006508//proteolysis","GO:0004252//serine-type endopeptidase activity","GO:0016021//integral to membrane;GO:0005739//mitochondrion"]
[930,"CSE_Unigene10209","SW_Unigene8582","-","+","-",549,{"v":0.993,"d":"99.30%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|225423611|ref|XP_002274383.1|","PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Vitis vinifera] >gi|147860031|emb|CAN83130.1| hypothetical protein VITISV_029538 [Vitis vinifera]","gi|147860027|emb|AM455752.2|","Vitis vinifera contig VV78X246665.9, whole genome shotgun sequence","-","-","-","-","K03859","vvi:100261218","phosphatidylinositol glycan, class C","GO:0046520//sphingoid biosynthetic process;GO:0006506//GPI anchor biosynthetic process;GO:0009860//pollen tube growth;GO:0009846//pollen germination;GO:0016126//sterol biosynthetic process","GO:0017176//phosphatidylinositol N-acetylglucosaminyltransferase activity","GO:0016021//integral to membrane;GO:0000506//glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex"]
[931,"CSE_Unigene10398","SW_Unigene4366","-","+","-",414,{"v":0.995,"d":"99.50%"},2,"NA",2,"NA","NA","gi|225470696|ref|XP_002263439.1|","PREDICTED: putative uncharacterized protein DDB_G0287975 [Vitis vinifera] >gi|297741055|emb|CBI31786.3| unnamed protein product [Vitis vinifera]","gi|225470695|ref|XM_002263403.1|","PREDICTED: Vitis vinifera uncharacterized LOC100241246 (LOC100241246), mRNA","-","-","-","-","K11270","vvi:100241246","chromosome transmission fidelity protein 8","-","GO:0005515//protein binding","GO:0005634//nucleus"]
[932,"CSE_Unigene11071","SW_Unigene18259","-","+","-",1467,{"v":0.995,"d":"99.50%"},8,7,1,{"v":0.042935,"d":"0.043"},{"v":0.00022203,"d":"0.0002"},"gi|225436849|ref|XP_002270788.1|","PREDICTED: pentatricopeptide repeat-containing protein At2g30780 [Vitis vinifera] >gi|296086664|emb|CBI32299.3| unnamed protein product [Vitis vinifera]","gi|359479844|ref|XM_002270752.2|","PREDICTED: Vitis vinifera pentatricopeptide repeat-containing protein At2g30780-like (LOC100256237), mRNA","sp|O49343|PP177_ARATH","Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana GN=At2g30780 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[933,"CSE_Unigene11361","SW_Unigene502","-","+","-",1095,{"v":0.982,"d":"98.20%"},20,8,12,{"v":0.521534,"d":"0.522"},{"v":0.193392,"d":"0.1934"},"gi|225427151|ref|XP_002277376.1|","PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]","gi|225427150|ref|XM_002277340.1|","PREDICTED: Vitis vinifera uncharacterized LOC100262589 (LOC100262589), mRNA","sp|Q9SKC4|ARI10_ARATH","Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana GN=ARI10 PE=2 SV=1","-","-","K11971","vvi:100262589","E3 ubiquitin-protein ligase RNF14 [EC:6.3.2.19]","GO:0009610//response to symbiotic fungus;GO:0006499//N-terminal protein myristoylation;GO:0006487//protein N-linked glycosylation","GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[934,"CSE_Unigene11464","SW_CL4356_Contig2","-","+","-",1422,{"v":0.992,"d":"99.20%"},11,6,5,{"v":0.212131,"d":"0.212"},{"v":0.0127813,"d":"0.0128"},"gi|147788269|emb|CAN69960.1|","hypothetical protein VITISV_032887 [Vitis vinifera]","gi|123673287|emb|AM453163.1|","Vitis vinifera contig VV78X098949.2, whole genome shotgun sequence","sp|Q84J71|PP161_ARATH","Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","GO:0006626//protein targeting to mitochondrion","-","GO:0005739//mitochondrion"]
[935,"CSE_Unigene11659","SW_Unigene24356","-","+","-",1458,{"v":0.988,"d":"98.80%"},18,8,10,{"v":0.424121,"d":"0.424"},{"v":0.0927275,"d":"0.0927"},"gi|225428586|ref|XP_002281132.1|","PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Vitis vinifera]","gi|123698700|emb|AM480223.1|","Vitis vinifera, whole genome shotgun sequence, contig VV78X045699.17, clone ENTAV 115","sp|Q9XIM8|PP155_ARATH","Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1","-","-","K15336","vvi:100259391","tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]","-","-","GO:0005739//mitochondrion"]
[936,"CSE_Unigene11766","SW_Unigene13305","-","+","-",1701,{"v":0.989,"d":"98.90%"},18,14,4,{"v":0.0863079,"d":"0.086"},{"v":1.69545e-06,"d":"0.0000"},"gi|297734165|emb|CBI15412.3|","unnamed protein product [Vitis vinifera]","gi|359491418|ref|XM_002275268.2|","PREDICTED: Vitis vinifera mismatch repair protein (MSH2), mRNA","sp|O24617|MSH2_ARATH","DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana GN=MSH2 PE=1 SV=1","COG0249","Mismatch repair ATPase (MutS family)","K08735","vvi:100268052","DNA mismatch repair protein MSH2","GO:0006346//methylation-dependent chromatin silencing;GO:0006301//postreplication repair;GO:0006306//DNA methylation;GO:0043570//maintenance of DNA repeat elements;GO:0000710//meiotic mismatch repair;GO:0016246//RNA interference;GO:0006311//meiotic gene conversion;GO:0006200//ATP catabolic process;GO:0031507//heterochromatin assembly;GO:0006290//pyrimidine dimer repair;GO:0006270//DNA replication initiation;GO:0031048//chromatin silencing by small RNA;GO:0048453//sepal formation;GO:0006275//regulation of DNA replication;GO:0009909//regulation of flower development;GO:0051567//histone H3-K9 methylation;GO:0008283//cell proliferation;GO:0045787//positive regulation of cell cycle;GO:0048451//petal formation;GO:0045128//negative regulation of reciprocal meiotic recombination;GO:0000724//double-strand break repair via homologous recombination","GO:0000404//loop DNA binding;GO:0032138//single base insertion or deletion binding;GO:0032137//guanine/thymine mispair binding;GO:0000403//Y-form DNA binding;GO:0000406//double-strand/single-strand DNA junction binding;GO:0005515//protein binding;GO:0005524//ATP binding;GO:0000400//four-way junction DNA binding;GO:0008094//DNA-dependent ATPase activity;GO:0003684//damaged DNA binding","GO:0032301//MutSalpha complex;GO:0032302//MutSbeta complex;GO:0005886//plasma membrane;GO:0000228//nuclear chromosome"]
[937,"CSE_Unigene11953","SW_Unigene4972","-","+","-",204,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|225427566|ref|XP_002268140.1|","PREDICTED: uncharacterized protein LOC100244227 [Vitis vinifera] >gi|296085504|emb|CBI29236.3| unnamed protein product [Vitis vinifera]","gi|349727515|emb|FQ394011.1|","Vitis vinifera clone SS0AFA23YB02","-","-","-","-","-","-","-","-","GO:0008270//zinc ion binding","GO:0005622//intracellular"]
[938,"CSE_Unigene1203","SW_Unigene5146","-","+","-",1596,{"v":0.996,"d":"99.60%"},6,3,3,{"v":0.313436,"d":"0.313"},{"v":0.152409,"d":"0.1524"},"gi|225444321|ref|XP_002264138.1|","PREDICTED: leucyl-tRNA synthetase [Vitis vinifera] >gi|302144097|emb|CBI23202.3| unnamed protein product [Vitis vinifera]","gi|225444320|ref|XM_002264102.1|","PREDICTED: Vitis vinifera leucyl-tRNA synthetase-like (LOC100255483), mRNA","sp|P93736|SYV_ARATH","Valine-tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2","COG0495","Leucyl-tRNA synthetase","K01869","vvi:100255483","leucyl-tRNA synthetase [EC:6.1.1.4]","GO:0010103//stomatal complex morphogenesis;GO:0009793//embryo development ending in seed dormancy;GO:0006450//regulation of translational fidelity;GO:0016556//mRNA modification;GO:0016226//iron-sulfur cluster assembly;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009658//chloroplast organization;GO:0006429//leucyl-tRNA aminoacylation;GO:0006364//rRNA processing;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0004823//leucine-tRNA ligase activity;GO:0002161//aminoacyl-tRNA editing activity;GO:0005524//ATP binding","GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[939,"CSE_Unigene12133","SW_Unigene14818","-","+","-",1278,{"v":0.991,"d":"99.10%"},12,8,4,{"v":0.13592,"d":"0.136"},{"v":0.000986147,"d":"0.0010"},"gi|225448739|ref|XP_002281209.1|","PREDICTED: leukotriene A-4 hydrolase homolog [Vitis vinifera]","gi|359486319|ref|XM_002281173.2|","PREDICTED: Vitis vinifera leukotriene A-4 hydrolase homolog (LOC100243305), mRNA","sp|Q9LV48|PERK1_ARATH","Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1","COG0308","Aminopeptidase N","K01254","vvi:100243305","leukotriene-A4 hydrolase [EC:3.3.2.6]","GO:0019370//leukotriene biosynthetic process;GO:0006260//DNA replication;GO:0051567//histone H3-K9 methylation;GO:0006508//proteolysis;GO:0008283//cell proliferation;GO:0006306//DNA methylation","GO:0008270//zinc ion binding;GO:0008237//metallopeptidase activity;GO:0004463//leukotriene-A4 hydrolase activity","GO:0005829//cytosol;GO:0009507//chloroplast"]
[940,"CSE_Unigene12544","SW_Unigene14506","-","+","-",1788,{"v":0.998,"d":"99.80%"},3,1,2,{"v":0.660599,"d":"0.661"},{"v":0.560346,"d":"0.5603"},"gi|359479309|ref|XP_003632255.1|","PREDICTED: uncharacterized protein LOC100242629 [Vitis vinifera]","gi|359479308|ref|XM_003632207.1|","PREDICTED: Vitis vinifera uncharacterized LOC100242629 (LOC100242629), mRNA","-","-","-","-","-","-","-","GO:0019375//galactolipid biosynthetic process;GO:0007155//cell adhesion;GO:0045010//actin nucleation;GO:0033044//regulation of chromosome organization;GO:0016926//protein desumoylation;GO:0010090//trichome morphogenesis;GO:0050665//hydrogen peroxide biosynthetic process;GO:0048765//root hair cell differentiation;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009887//organ morphogenesis;GO:0071555//cell wall organization","-","GO:0009507//chloroplast;GO:0005741//mitochondrial outer membrane;GO:0043234//protein complex"]
[941,"CSE_Unigene12585","SW_CL8530_Contig2","-","+","-",1380,{"v":0.998,"d":"99.80%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225462557|ref|XP_002267743.1|","PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like [Vitis vinifera]","gi|359484054|ref|XM_002267707.2|","PREDICTED: Vitis vinifera dihydroorotate dehydrogenase (quinone), mitochondrial-like (LOC100258316), mRNA","sp|P32746|PYRD_ARATH","Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana GN=PYRD PE=1 SV=2","COG0167","Dihydroorotate dehydrogenase","K00254","vvi:100258316","dihydroorotate dehydrogenase [EC:1.3.5.2]","GO:0009231//riboflavin biosynthetic process;GO:0006207//'de novo' pyrimidine nucleobase biosynthetic process;GO:0006222//UMP biosynthetic process;GO:0006164//purine nucleotide biosynthetic process;GO:0055114//oxidation-reduction process;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0043687//post-translational protein modification;GO:0042991//transcription factor import into nucleus","GO:0008270//zinc ion binding;GO:0008835//diaminohydroxyphosphoribosylaminopyrimidine deaminase activity;GO:0004158//dihydroorotate oxidase activity","GO:0016020//membrane;GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[942,"CSE_Unigene12739","SW_Unigene1404","-","+","-",954,{"v":0.991,"d":"99.10%"},9,7,2,{"v":0.0906827,"d":"0.091"},{"v":0.00109088,"d":"0.0011"},"gi|225442511|ref|XP_002284034.1|","PREDICTED: nucleoporin NUP53 [Vitis vinifera] >gi|297743215|emb|CBI36082.3| unnamed protein product [Vitis vinifera]","gi|225442510|ref|XM_002283998.1|","PREDICTED: Vitis vinifera nucleoporin NUP53-like (LOC100244686), mRNA","-","-","-","-","K14313","vvi:100244686","nuclear pore complex protein Nup53","GO:0055085//transmembrane transport","-","GO:0031965//nuclear membrane"]
[943,"CSE_Unigene13161","SW_Unigene10096","-","+","-",1734,{"v":0.993,"d":"99.30%"},12,8,4,{"v":0.197985,"d":"0.198"},{"v":0.00663615,"d":"0.0066"},"gi|225437742|ref|XP_002273486.1|","PREDICTED: chaperone activity of bc1 complex-like, mitochondrial [Vitis vinifera] >gi|297744068|emb|CBI37038.3| unnamed protein product [Vitis vinifera]","gi|225437741|ref|XM_002273450.1|","PREDICTED: Vitis vinifera chaperone activity of bc1 complex-like, mitochondrial (LOC100267562), mRNA","sp|Q9MA15|Y1796_ARATH","Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1","COG0661","Predicted unusual protein kinase","K08869","vvi:100267562","aarF domain-containing kinase","GO:0006399//tRNA metabolic process;GO:0006098//pentose-phosphate shunt;GO:0010218//response to far red light;GO:0016117//carotenoid biosynthetic process;GO:0006879//cellular iron ion homeostasis;GO:0010114//response to red light;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0006352//DNA-dependent transcription, initiation;GO:0006355//regulation of transcription, DNA-dependent;GO:0009902//chloroplast relocation;GO:0010039//response to iron ion;GO:0000302//response to reactive oxygen species;GO:0016226//iron-sulfur cluster assembly;GO:0071482//cellular response to light stimulus;GO:2000030//regulation of response to red or far red light;GO:0009637//response to blue light;GO:0015996//chlorophyll catabolic process;GO:0017004//cytochrome complex assembly;GO:0006364//rRNA processing;GO:0010027//thylakoid membrane organization","GO:0003899//DNA-directed RNA polymerase activity;GO:0005515//protein binding;GO:0001053//plastid sigma factor activity;GO:0003677//DNA binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances;GO:0003700//sequence-specific DNA binding transcription factor activity","GO:0005746//mitochondrial respiratory chain;GO:0009570//chloroplast stroma"]
[944,"CSE_Unigene13318","SW_Unigene10458","-","+","-",795,{"v":0.994,"d":"99.40%"},5,{"v":3.95604,"d":"4"},{"v":1.04396,"d":"1"},{"v":0.0844434,"d":"0.084"},{"v":0.0133995,"d":"0.0134"},"gi|225448741|ref|XP_002281259.1|","PREDICTED: uncharacterized protein LOC100265617 [Vitis vinifera] >gi|297736461|emb|CBI25332.3| unnamed protein product [Vitis vinifera]","gi|359486318|ref|XM_002281223.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265617 (LOC100265617), mRNA","sp|Q9FQ25|TON1A_ARATH","Protein TONNEAU 1a OS=Arabidopsis thaliana GN=TON1A PE=1 SV=1","-","-","-","-","-","-","-","GO:0030863//cortical cytoskeleton;GO:0009574//preprophase band;GO:0005886//plasma membrane"]
[945,"CSE_Unigene13631","SW_Unigene16866","-","+","-",945,{"v":0.992,"d":"99.20%"},8,5,3,{"v":0.164399,"d":"0.164"},{"v":0.0146327,"d":"0.0146"},"gi|225452408|ref|XP_002273877.1|","PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A [Vitis vinifera]","gi|359488828|ref|XM_002273841.2|","PREDICTED: Vitis vinifera tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A-like (LOC100242193), mRNA","-","-","COG2519","tRNA(1-methyladenosine) methyltransferase and related methyltransferases","K07442","vvi:100242193","tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220]","GO:0030488//tRNA methylation","GO:0016429//tRNA (adenine-N1-)-methyltransferase activity","GO:0031515//tRNA (m1A) methyltransferase complex;GO:0005634//nucleus"]
[946,"CSE_Unigene13834","SW_Unigene23365","-","+","-",3510,{"v":0.993,"d":"99.30%"},25,13,12,{"v":0.325697,"d":"0.326"},{"v":0.00518291,"d":"0.0052"},"gi|359489443|ref|XP_002274584.2|","PREDICTED: tubulin-specific chaperone D isoform 1 [Vitis vinifera]","gi|359489442|ref|XM_002274548.2|","PREDICTED: Vitis vinifera tubulin-specific chaperone D-like, transcript variant 1 (LOC100259210), mRNA","-","-","COG5234","Beta-tubulin folding cofactor D","-","-","-","GO:0010155//regulation of proton transport;GO:0007267//cell-cell signaling;GO:0006457//protein folding;GO:0009793//embryo development ending in seed dormancy;GO:0010050//vegetative phase change;GO:0051225//spindle assembly;GO:0046777//protein autophosphorylation;GO:0007020//microtubule nucleation;GO:0009637//response to blue light;GO:0035196//production of miRNAs involved in gene silencing by miRNA;GO:0010267//production of ta-siRNAs involved in RNA interference;GO:0009616//virus induced gene silencing;GO:0007021//tubulin complex assembly;GO:0000910//cytokinesis","GO:0015631//tubulin binding","GO:0005829//cytosol;GO:0009506//plasmodesma"]
[947,"CSE_Unigene14265","SW_Unigene22993","-","+","-",2232,{"v":0.996,"d":"99.60%"},10,5,5,{"v":0.394923,"d":"0.395"},{"v":0.12331400000000001,"d":"0.1233"},"gi|225452200|ref|XP_002266771.1|","PREDICTED: uncharacterized protein LOC100243984 [Vitis vinifera] >gi|296090271|emb|CBI40090.3| unnamed protein product [Vitis vinifera]","gi|359488629|ref|XM_002266735.2|","PREDICTED: Vitis vinifera uncharacterized LOC100243984 (LOC100243984), mRNA","-","-","-","-","-","-","-","-","GO:0051011//microtubule minus-end binding","GO:0005819//spindle;GO:0009524//phragmoplast;GO:0005634//nucleus"]
[948,"CSE_Unigene14344","SW_CL3761_Contig1","-","+","-",540,{"v":0.998,"d":"99.80%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|359477597|ref|XP_002284076.2|","PREDICTED: uncharacterized protein LOC100249350 [Vitis vinifera] >gi|297737152|emb|CBI26353.3| unnamed protein product [Vitis vinifera]","gi|359477596|ref|XM_002284040.2|","PREDICTED: Vitis vinifera uncharacterized LOC100249350 (LOC100249350), mRNA","-","-","-","-","-","-","-","-","-","GO:0005634//nucleus"]
[949,"CSE_Unigene14416","SW_Unigene13206","-","+","-",927,{"v":0.999,"d":"99.90%"},1,1,"NA",{"v":0,"d":"0.000"},"NA","gi|147797613|emb|CAN64867.1|","hypothetical protein VITISV_027855 [Vitis vinifera]","gi|359475587|ref|XM_002264015.2|","PREDICTED: Vitis vinifera mitochondrial import receptor subunit TOM40 homolog 1-like (LOC100268104), mRNA","sp|Q9LHE5|TO401_ARATH","Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis thaliana GN=TOM40-1 PE=1 SV=3","-","-","K11518","vvi:100268104","mitochondrial import receptor subunit TOM40","GO:0055085//transmembrane transport","-","GO:0005743//mitochondrial inner membrane;GO:0005886//plasma membrane;GO:0005742//mitochondrial outer membrane translocase complex"]
[950,"CSE_Unigene14659","SW_Unigene22578","-","+","-",2082,{"v":0.995,"d":"99.50%"},10,8,2,{"v":0.0661309,"d":"0.066"},{"v":0.00011226,"d":"0.0001"},"gi|225434863|ref|XP_002280661.1|","PREDICTED: protein TOC75-3, chloroplastic-like [Vitis vinifera]","gi|225434862|ref|XM_002280625.1|","PREDICTED: Vitis vinifera protein TOC75-3, chloroplastic-like (LOC100263897), mRNA","sp|Q9STE8|TC753_ARATH","Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1","COG4775","Outer membrane protein/protective antigen OMA87","K07277","smo:SELMODRAFT_84522","outer membrane protein","GO:0048598//embryonic morphogenesis;GO:0009658//chloroplast organization;GO:0048481//ovule development;GO:0045037//protein import into chloroplast stroma","GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity","GO:0031359//integral to chloroplast outer membrane;GO:0005774//vacuolar membrane;GO:0010006//Toc complex;GO:0005886//plasma membrane"]
[951,"CSE_Unigene14661","SW_Unigene11598","-","+","-",3261,{"v":0.997,"d":"99.70%"},9,8,1,{"v":0.0421009,"d":"0.042"},{"v":0.000111575,"d":"0.0001"},"gi|225452161|ref|XP_002263932.1|","PREDICTED: protein TPLATE-like [Vitis vinifera]","gi|225452160|ref|XM_002263896.1|","PREDICTED: Vitis vinifera protein TPLATE-like (LOC100260972), mRNA","sp|F4J8D3|TPLAT_ARATH","Protein TPLATE OS=Arabidopsis thaliana GN=TPLATE PE=1 SV=1","-","-","-","-","-","GO:0009555//pollen development;GO:0048193//Golgi vesicle transport;GO:0030244//cellulose biosynthetic process;GO:0006897//endocytosis","-","GO:0009524//phragmoplast;GO:0009504//cell plate;GO:0009506//plasmodesma;GO:0005886//plasma membrane;GO:0005634//nucleus;GO:0005829//cytosol"]
[952,"CSE_Unigene14674","SW_Unigene7677","-","+","-",2370,{"v":0.994,"d":"99.40%"},15,3,12,{"v":1.1572,"d":"1.157"},{"v":0.978102,"d":"0.9781"},"gi|296081706|emb|CBI20711.3|","unnamed protein product [Vitis vinifera]","gi|359475969|ref|XM_002279780.2|","PREDICTED: Vitis vinifera uncharacterized LOC100252571 (LOC100252571), mRNA","sp|Q2QKB3|U2A2A_WHEAT","Splicing factor U2af large subunit A OS=Triticum aestivum GN=U2AF65A PE=2 SV=1","COG5222","Uncharacterized conserved protein, contains RING Zn-finger","K15541","ppp:PHYPADRAFT_138503","protein MPE1","-","-","-"]
[953,"CSE_Unigene14702","SW_Unigene16628","-","+","-",3906,{"v":0.993,"d":"99.30%"},27,17,10,{"v":0.24248,"d":"0.242"},{"v":0.000294629,"d":"0.0003"},"gi|302144085|emb|CBI23190.3|","unnamed protein product [Vitis vinifera]","gi|470118271|ref|XM_004295207.1|","PREDICTED: Fragaria vesca subsp. vesca uncharacterized LOC101292982 (LOC101292982), mRNA","sp|P0C895|Y2010_ARATH","LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana GN=At2g30105 PE=1 SV=1","COG3621","Patatin","K13420","rcu:RCOM_0633880","LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]","GO:0006629//lipid metabolic process;GO:0016926//protein desumoylation;GO:0009620//response to fungus;GO:0009695//jasmonic acid biosynthetic process;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0050665//hydrogen peroxide biosynthetic process","GO:0047714//galactolipase activity;GO:0004620//phospholipase activity","GO:0005634//nucleus"]
[954,"CSE_Unigene14770","SW_Unigene12060","-","+","-",1125,{"v":0.997,"d":"99.70%"},3,1,2,{"v":0.704678,"d":"0.705"},{"v":0.578825,"d":"0.5788"},"gi|302142199|emb|CBI19402.3|","unnamed protein product [Vitis vinifera]","gi|359491962|ref|XM_002285283.2|","PREDICTED: Vitis vinifera F-box/kelch-repeat protein At5g43190-like (LOC100260898), mRNA","sp|Q9FHS6|FK119_ARATH","F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana GN=At5g43190 PE=2 SV=1","-","-","-","-","-","GO:0006511//ubiquitin-dependent protein catabolic process;GO:0006869//lipid transport;GO:0015824//proline transport","GO:0016874//ligase activity","-"]
[955,"CSE_Unigene15294","SW_Unigene5935","-","+","-",591,{"v":0.992,"d":"99.20%"},5,3,2,{"v":0.198319,"d":"0.198"},{"v":0.0107656,"d":"0.0108"},"gi|302143378|emb|CBI21939.3|","unnamed protein product [Vitis vinifera]","gi|359485269|ref|XM_002278811.2|","PREDICTED: Vitis vinifera glucosidase 2 subunit beta-like (LOC100264427), mRNA","-","-","-","-","K08288","ath:AT5G56360","protein kinase C substrate 80K-H","GO:0044249//cellular biosynthetic process;GO:1901576;GO:0044238//primary metabolic process;GO:0042742//defense response to bacterium;GO:0044260;GO:0034641//cellular nitrogen compound metabolic process","GO:0005516//calmodulin binding","GO:0005576//extracellular region;GO:0005783//endoplasmic reticulum"]
[956,"CSE_Unigene15356","SW_Unigene17706","-","+","-",495,{"v":0.994,"d":"99.40%"},3,1,2,{"v":0.6192,"d":"0.619"},{"v":0.543276,"d":"0.5433"},"gi|297741046|emb|CBI31358.3|","unnamed protein product [Vitis vinifera]","gi|359495245|ref|XM_002279475.2|","PREDICTED: Vitis vinifera uncharacterized LOC100255004 (LOC100255004), mRNA","sp|O80543|Y1280_ARATH","Putative methyltransferase At1g22800 OS=Arabidopsis thaliana GN=At1g22800 PE=2 SV=2","COG0500","SAM-dependent methyltransferases","-","-","-","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0032259//methylation","GO:0008168//methyltransferase activity","GO:0005739//mitochondrion"]
[957,"CSE_Unigene15564","SW_Unigene6941","-","+","-",2907,{"v":0.996,"d":"99.60%"},12,9,3,{"v":0.120026,"d":"0.120"},{"v":0.000642134,"d":"0.0006"},"gi|296081171|emb|CBI18197.3|","unnamed protein product [Vitis vinifera]","gi|359493108|ref|XM_002268989.2|","PREDICTED: Vitis vinifera exocyst complex component 2-like (LOC100241808), mRNA","sp|Q8S3U9|EXOC2_ARATH","Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1","-","-","-","-","-","GO:0010090//trichome morphogenesis;GO:0071555//cell wall organization;GO:0007155//cell adhesion;GO:0009860//pollen tube growth;GO:0048765//root hair cell differentiation;GO:0045010//actin nucleation;GO:0009846//pollen germination","-","GO:0005829//cytosol;GO:0009506//plasmodesma;GO:0005794//Golgi apparatus;GO:0005886//plasma membrane"]
[958,"CSE_Unigene15751","SW_Unigene11507","-","+","-",981,{"v":0.992,"d":"99.20%"},8,4,4,{"v":0.253179,"d":"0.253"},{"v":0.0589951,"d":"0.0590"},"gi|225448172|ref|XP_002265791.1|","PREDICTED: ubiquitin-like domain-containing CTD phosphatase [Vitis vinifera]","gi|359486173|ref|XM_002265755.2|","PREDICTED: Vitis vinifera ubiquitin-like domain-containing CTD phosphatase (LOC100262993), mRNA","sp|Q8W3M6|UBCP_ARATH","Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis thaliana GN=At4g06599 PE=2 SV=1","-","-","K01090","pop:POPTR_274109","protein phosphatase [EC:3.1.3.16]","-","GO:0004721//phosphoprotein phosphatase activity","GO:0005634//nucleus"]
[959,"CSE_Unigene15757","SW_Unigene8613","-","+","-",1857,{"v":0.99,"d":"99.00%"},18,14,4,{"v":0.0835206,"d":"0.084"},{"v":1.22705e-06,"d":"0.0000"},"gi|449443428|ref|XP_004139479.1|","PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like [Cucumis sativus] >gi|449501645|ref|XP_004161425.1| PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like [Cucumis sativus]","gi|359479379|ref|XM_002269923.2|","PREDICTED: Vitis vinifera peptidylprolyl isomerase domain and WD repeat-containing protein 1-like (LOC100263690), mRNA","sp|Q9FJX0|PPIL2_ARATH","Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1","COG0652","Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family","K12736","vvi:100263690","peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]","GO:0010182//sugar mediated signaling pathway;GO:0009793//embryo development ending in seed dormancy;GO:0006406//mRNA export from nucleus;GO:0043687//post-translational protein modification;GO:0048765//root hair cell differentiation;GO:0016579//protein deubiquitination;GO:0010332//response to gamma radiation;GO:0050826//response to freezing;GO:0048443//stamen development;GO:0006306//DNA methylation;GO:0010082//regulation of root meristem growth;GO:0000413//protein peptidyl-prolyl isomerization;GO:0006396//RNA processing;GO:0016567//protein ubiquitination;GO:0010074//maintenance of meristem identity;GO:0006312//mitotic recombination;GO:0043247//telomere maintenance in response to DNA damage;GO:0010358//leaf shaping;GO:0010388//cullin deneddylation;GO:0009845//seed germination;GO:0010090//trichome morphogenesis;GO:0010014//meristem initiation;GO:0010338//leaf formation;GO:0032204//regulation of telomere maintenance;GO:0010162//seed dormancy process;GO:0019915//lipid storage;GO:0010305//leaf vascular tissue pattern formation;GO:0006606//protein import into nucleus;GO:0000278//mitotic cell cycle;GO:0045010//actin nucleation;GO:0048453//sepal formation;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009560//embryo sac egg cell differentiation;GO:0009640//photomorphogenesis;GO:0009909//regulation of flower development;GO:0031060//regulation of histone methylation;GO:0051567//histone H3-K9 methylation;GO:0007131//reciprocal meiotic recombination;GO:0007155//cell adhesion;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0031047//gene silencing by RNA;GO:0048451//petal formation;GO:0009855//determination of bilateral symmetry;GO:0048440//carpel development;GO:0006457//protein folding;GO:0071555//cell wall organization","GO:0042393//histone binding;GO:0003682//chromatin binding;GO:0003755//peptidyl-prolyl cis-trans isomerase activity","GO:0080008//Cul4-RING ubiquitin ligase complex;GO:0005634//nucleus"]
[960,"CSE_Unigene15814","SW_Unigene8553","-","+","-",1635,{"v":0.99,"d":"99.00%"},16,9,7,{"v":0.243686,"d":"0.244"},{"v":0.00554801,"d":"0.0055"},"gi|225454344|ref|XP_002275920.1|","PREDICTED: uncharacterized protein LOC100261915 [Vitis vinifera]","gi|225454343|ref|XM_002275884.1|","PREDICTED: Vitis vinifera uncharacterized LOC100261915 (LOC100261915), mRNA","sp|Q8VZL4|MSL1_ARATH","Mechanosensitive ion channel protein 1, mitochondrial OS=Arabidopsis thaliana GN=MSL1 PE=2 SV=1","COG0668","Small-conductance mechanosensitive channel","K16052","ppp:PHYPADRAFT_193835","MscS family membrane protein YnaI","GO:0055085//transmembrane transport","-","GO:0005739//mitochondrion;GO:0009941//chloroplast envelope;GO:0005886//plasma membrane"]
[961,"CSE_Unigene15941","SW_Unigene13274","-","+","-",888,{"v":0.986,"d":"98.60%"},12,2,10,{"v":1.36504,"d":"1.365"},{"v":0.945566,"d":"0.9456"},"gi|297745890|emb|CBI15946.3|","unnamed protein product [Vitis vinifera]","gi|359478833|ref|XM_002279019.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263805 (LOC100263805), mRNA","sp|Q19V75|RR18_CHLAT","30S ribosomal protein S18, chloroplastic OS=Chlorokybus atmophyticus GN=rps18 PE=3 SV=2","COG0238","Ribosomal protein S18","K02963","olu:OSTLU_29387","small subunit ribosomal protein S18","-","-","GO:0030529//ribonucleoprotein complex"]
[962,"CSE_Unigene16287","SW_Unigene7083","-","+","-",879,{"v":0.99,"d":"99.00%"},9,6,3,{"v":0.206667,"d":"0.207"},{"v":0.0229875,"d":"0.0230"},"gi|225428816|ref|XP_002285208.1|","PREDICTED: ferredoxin-nitrite reductase, chloroplastic [Vitis vinifera]","gi|225428815|ref|XM_002285172.1|","PREDICTED: Vitis vinifera ferredoxin-nitrite reductase, chloroplastic-like (LOC100253671), mRNA","sp|P05314|NIR_SPIOL","Ferredoxin-nitrite reductase, chloroplastic OS=Spinacia oleracea GN=NIR PE=1 SV=1","COG0155","Sulfite reductase, beta subunit (hemoprotein)","K00366","gmx:732631","ferredoxin-nitrite reductase [EC:1.7.7.1]","GO:0010167//response to nitrate;GO:0055114//oxidation-reduction process","GO:0048307;GO:0051536//iron-sulfur cluster binding;GO:0020037//heme binding","GO:0009570//chloroplast stroma;GO:0016020//membrane;GO:0048046//apoplast;GO:0005739//mitochondrion"]
[963,"CSE_Unigene1660","SW_Unigene6131","-","+","-",1272,{"v":0.997,"d":"99.70%"},4,2,2,{"v":0.349086,"d":"0.349"},{"v":0.272823,"d":"0.2728"},"gi|225435943|ref|XP_002268943.1|","PREDICTED: F-box/kelch-repeat protein At5g26960-like [Vitis vinifera]","gi|225435942|ref|XM_002268907.1|","PREDICTED: Vitis vinifera F-box/kelch-repeat protein At5g26960-like (LOC100247908), mRNA","sp|Q6NPN5|FK113_ARATH","F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana GN=At5g26960 PE=2 SV=1","-","-","K14325","ppp:PHYPADRAFT_166555","RNA-binding protein with serine-rich domain 1","-","-","-"]
[964,"CSE_Unigene16664","SW_Unigene17645","-","+","-",1581,{"v":0.996,"d":"99.60%"},7,"NA",7,"NA","NA","gi|359479221|ref|XP_002279963.2|","PREDICTED: uncharacterized protein LOC100265339 [Vitis vinifera]","gi|359479220|ref|XM_002279927.2|","PREDICTED: Vitis vinifera uncharacterized LOC100265339 (LOC100265339), mRNA","sp|Q9LMT8|HDG12_ARATH","Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1","-","-","K09338","ath:AT1G17920","homeobox-leucine zipper protein","GO:0034641//cellular nitrogen compound metabolic process;GO:0044707;GO:0009628//response to abiotic stimulus;GO:0006725//cellular aromatic compound metabolic process;GO:0046483//heterocycle metabolic process;GO:1901360","GO:0003677//DNA binding","-"]
[965,"CSE_Unigene17047","SW_Unigene21420","-","+","-",1131,{"v":0.984,"d":"98.40%"},6,5,1,{"v":0.059748,"d":"0.060"},{"v":0.00306598,"d":"0.0031"},"gi|225428566|ref|XP_002284659.1|","PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vitis vinifera]","gi|359475262|ref|XM_002284623.2|","PREDICTED: Vitis vinifera 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like (LOC100267479), mRNA","sp|Q94B35|ISPH_ARATH","4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=ISPH PE=2 SV=1","COG0761","Penicillin tolerance protein","K03527","vvi:100267479","4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]","GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0055114//oxidation-reduction process","GO:0051745//4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity;GO:0046429//4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity","GO:0009570//chloroplast stroma"]
[966,"CSE_Unigene17067","SW_Unigene22685","-","+","-",1569,{"v":0.993,"d":"99.30%"},11,5,6,{"v":0.342139,"d":"0.342"},{"v":0.0754032,"d":"0.0754"},"gi|297741712|emb|CBI32844.3|","unnamed protein product [Vitis vinifera]","gi|359481577|ref|XM_002278401.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263596 (LOC100263596), mRNA","sp|Q9LT25|PR40C_ARATH","Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana GN=MED35C PE=1 SV=1","COG5104","Splicing factor","K12865","vvi:100263596","polyglutamine-binding protein 1","GO:0016558//protein import into peroxisome matrix;GO:0048573//photoperiodism, flowering;GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0006635//fatty acid beta-oxidation;GO:0019722//calcium-mediated signaling","-","-"]
[967,"CSE_Unigene17071","SW_Unigene22551","-","+","-",2421,{"v":0.995,"d":"99.50%"},11,7,4,{"v":0.248342,"d":"0.248"},{"v":0.0231759,"d":"0.0232"},"gi|462400182|gb|EMJ05850.1|","hypothetical protein PRUPE_ppa001543mg [Prunus persica]","gi|147769942|emb|AM456205.2|","Vitis vinifera contig VV78X120296.6, whole genome shotgun sequence","-","-","-","-","-","-","-","GO:0006623//protein targeting to vacuole","-","GO:0016021//integral to membrane;GO:0009507//chloroplast"]
[968,"CSE_Unigene17141","SW_Unigene748","-","+","-",891,{"v":0.993,"d":"99.30%"},6,{"v":2.84377,"d":"3"},{"v":3.15623,"d":"3"},{"v":0.359718,"d":"0.360"},{"v":0.162308,"d":"0.1623"},"gi|359486573|ref|XP_002270458.2|","PREDICTED: vacuolar protein sorting-associated protein 33 homolog [Vitis vinifera] >gi|296085984|emb|CBI31425.3| unnamed protein product [Vitis vinifera]","gi|359486572|ref|XM_002270422.2|","PREDICTED: Vitis vinifera vacuolar protein sorting-associated protein 33 homolog (LOC100242749), mRNA","sp|Q94KJ7|VPS33_ARATH","Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1","COG5158","Proteins involved in synaptic transmission and general secretion, Sec1 family","K12479","zma:100286026","vacuolar protein sorting-associated protein 45","GO:0006623//protein targeting to vacuole;GO:0007030//Golgi organization;GO:0006944//cellular membrane fusion;GO:0048193//Golgi vesicle transport;GO:0006904//vesicle docking involved in exocytosis;GO:0009306//protein secretion;GO:0007033//vacuole organization","GO:0008565//protein transporter activity","GO:0009705//plant-type vacuole membrane;GO:0005829//cytosol"]
[969,"CSE_Unigene17165","SW_Unigene15434","-","+","-",1974,{"v":0.99,"d":"99.00%"},19,11,8,{"v":0.259999,"d":"0.260"},{"v":0.00374851,"d":"0.0037"},"gi|225460751|ref|XP_002273722.1|","PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic isoform 1 [Vitis vinifera]","gi|225460750|ref|XM_002273686.1|","PREDICTED: Vitis vinifera DUF21 domain-containing protein At1g55930, chloroplastic-like, transcript variant 1 (LOC100260506), mRNA","sp|Q84R21|Y1559_ARATH","DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2","COG1253","Hemolysins and related proteins containing CBS domains","-","-","-","GO:0006355//regulation of transcription, DNA-dependent","GO:0003677//DNA binding;GO:0050660//flavin adenine dinucleotide binding","GO:0009941//chloroplast envelope;GO:0005634//nucleus;GO:0005886//plasma membrane"]
[970,"CSE_Unigene17641","SW_Unigene7626","-","+","-",4305,{"v":0.995,"d":"99.50%"},21,14,7,{"v":0.188736,"d":"0.189"},{"v":3.51105e-05,"d":"0.0000"},"gi|359472595|ref|XP_002281257.2|","PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera]","gi|359472594|ref|XM_002281221.2|","PREDICTED: Vitis vinifera nuclear pore complex protein Nup155-like (LOC100243944), mRNA","-","-","COG5308","Nuclear pore complex subunit","K14312","vvi:100243944","nuclear pore complex protein Nup155","GO:0001510//RNA methylation;GO:0006913//nucleocytoplasmic transport","GO:0017056//structural constituent of nuclear pore;GO:0005487//nucleocytoplasmic transporter activity;GO:0005515//protein binding","GO:0005730//nucleolus;GO:0009506//plasmodesma;GO:0005643//nuclear pore;GO:0009507//chloroplast;GO:0005886//plasma membrane"]
[971,"CSE_Unigene17738","SW_Unigene17843","-","+","-",1239,{"v":0.992,"d":"99.20%"},10,6,4,{"v":0.267861,"d":"0.268"},{"v":0.0388617,"d":"0.0389"},"gi|225427242|ref|XP_002278544.1|","PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]","gi|349704816|emb|FQ383776.1|","Vitis vinifera clone SS0ABG16YH12","sp|Q9LQK7|AB7I_ARATH","Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1","COG0719","ABC-type transport system involved in Fe-S cluster assembly, permease component","K09015","vvi:100260803","Fe-S cluster assembly protein SufD","GO:0006810//transport;GO:0035304//regulation of protein dephosphorylation;GO:0009793//embryo development ending in seed dormancy;GO:0010207//photosystem II assembly;GO:0009902//chloroplast relocation;GO:0016226//iron-sulfur cluster assembly;GO:0006569//tryptophan catabolic process;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009684//indoleacetic acid biosynthetic process;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0042793//transcription from plastid promoter;GO:0006364//rRNA processing;GO:0048481//ovule development;GO:0010027//thylakoid membrane organization","GO:0005515//protein binding;GO:0005215//transporter activity","GO:0009570//chloroplast stroma"]
[972,"CSE_Unigene17805","SW_Unigene14136","-","+","-",4143,{"v":0.997,"d":"99.70%"},14,9,5,{"v":0.177405,"d":"0.177"},{"v":0.000262139,"d":"0.0003"},"gi|225435142|ref|XP_002284629.1|","PREDICTED: uncharacterized protein LOC100250176 [Vitis vinifera]","gi|359479019|ref|XM_002284593.2|","PREDICTED: Vitis vinifera uncharacterized LOC100250176 (LOC100250176), mRNA","-","-","-","-","K11671","ppp:PHYPADRAFT_164383","nuclear factor related to kappa-B-binding protein","GO:0000278//mitotic cell cycle;GO:0043247//telomere maintenance in response to DNA damage;GO:0031048//chromatin silencing by small RNA;GO:0010332//response to gamma radiation;GO:0007131//reciprocal meiotic recombination;GO:0045492//xylan biosynthetic process;GO:0032504//multicellular organism reproduction;GO:0045132//meiotic chromosome segregation;GO:0042138//meiotic DNA double-strand break formation;GO:0008284//positive regulation of cell proliferation;GO:0006396//RNA processing;GO:0032204//regulation of telomere maintenance;GO:0010413//glucuronoxylan metabolic process;GO:0007129//synapsis;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0007062//sister chromatid cohesion","-","GO:0005634//nucleus"]
[973,"CSE_Unigene18018","SW_CL533_Contig3","-","+","-",3330,{"v":0.995,"d":"99.50%"},16,10,6,{"v":0.208889,"d":"0.209"},{"v":0.00220163,"d":"0.0022"},"gi|225431806|ref|XP_002272864.1|","PREDICTED: phospholipase D p1-like [Vitis vinifera]","gi|225431805|ref|XM_002272828.1|","PREDICTED: Vitis vinifera phospholipase D p1-like (LOC100261987), mRNA","sp|Q9LRZ5|PLDP1_ARATH","Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1","COG1502","Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes","K01115","vvi:100261987","phospholipase D [EC:3.1.4.4]","GO:0031348//negative regulation of defense response;GO:0016036//cellular response to phosphate starvation;GO:0019375//galactolipid biosynthetic process;GO:0006995//cellular response to nitrogen starvation;GO:0009867//jasmonic acid mediated signaling pathway;GO:0009862//systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0010363//regulation of plant-type hypersensitive response;GO:0042631//cellular response to water deprivation;GO:0006612//protein targeting to membrane;GO:0050832//defense response to fungus;GO:0043069//negative regulation of programmed cell death;GO:0009395//phospholipid catabolic process;GO:0060627//regulation of vesicle-mediated transport;GO:0000165//MAPK cascade;GO:0048193//Golgi vesicle transport;GO:0048527//lateral root development;GO:0009409//response to cold;GO:0009738//abscisic acid mediated signaling pathway;GO:0055114//oxidation-reduction process;GO:0030968//endoplasmic reticulum unfolded protein response;GO:0009733//response to auxin stimulus","GO:0004630//phospholipase D activity;GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0005543//phospholipid binding;GO:0070290//NAPE-specific phospholipase D activity","GO:0005773//vacuole"]
[974,"CSE_Unigene1830","SW_Unigene15179","-","+","-",1500,{"v":0.991,"d":"99.10%"},14,5,9,{"v":0.725287,"d":"0.725"},{"v":0.551722,"d":"0.5517"},"gi|147823109|emb|CAN75277.1|","hypothetical protein VITISV_015753 [Vitis vinifera]","gi|123713076|emb|AM481374.1|","Vitis vinifera contig VV78X249479.9, whole genome shotgun sequence","sp|Q9LD90|CBF5_ARATH","H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana GN=CBF5 PE=1 SV=1","COG0724","RNA-binding proteins (RRM domain)","K03243","ath:AT1G76820","translation initiation factor 5B","-","-","-"]
[975,"CSE_Unigene18325","SW_Unigene17084","-","+","-",3654,{"v":0.992,"d":"99.20%"},28,19,9,{"v":0.107337,"d":"0.107"},{"v":1.58336e-08,"d":"0.0000"},"gi|225438835|ref|XP_002283580.1|","PREDICTED: putative oxidoreductase C1F5.03c-like isoform 1 [Vitis vinifera]","gi|123716400|emb|AM454724.1|","Vitis vinifera contig VV78X229598.18, whole genome shotgun sequence","-","-","COG0665","Glycine/D-amino acid oxidases (deaminating)","-","-","-","GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity","-"]
[976,"CSE_Unigene18427","SW_Unigene7661","-","+","-",2130,{"v":0.996,"d":"99.60%"},8,5,3,{"v":0.198191,"d":"0.198"},{"v":0.0268425,"d":"0.0268"},"gi|297738766|emb|CBI28011.3|","unnamed protein product [Vitis vinifera]","gi|225445111|ref|XM_002280467.1|","PREDICTED: Vitis vinifera golgin candidate 1-like (LOC100255916), mRNA","sp|Q8S8N9|GOGC1_ARATH","Golgin candidate 1 OS=Arabidopsis thaliana GN=GC1 PE=2 SV=2","COG1196","Chromosome segregation ATPases","K10400","cme:CMO070C","kinesin family member 15","GO:0006098//pentose-phosphate shunt;GO:0016117//carotenoid biosynthetic process;GO:0010020//chloroplast fission;GO:0019288//isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0000956//nuclear-transcribed mRNA catabolic process;GO:0010027//thylakoid membrane organization","GO:0005488//binding","GO:0009941//chloroplast envelope;GO:0016020//membrane;GO:0005794//Golgi apparatus;GO:0005634//nucleus"]
[977,"CSE_Unigene18477","SW_Unigene2693","-","+","-",510,{"v":0.994,"d":"99.40%"},3,2,1,{"v":0.147857,"d":"0.148"},{"v":0.12186,"d":"0.1219"},"gi|359483669|ref|XP_002274947.2|","PREDICTED: uncharacterized protein LOC100253161 [Vitis vinifera] >gi|297740810|emb|CBI30992.3| unnamed protein product [Vitis vinifera]","gi|359483668|ref|XM_002274911.2|","PREDICTED: Vitis vinifera uncharacterized LOC100253161 (LOC100253161), mRNA","-","-","COG4886","Leucine-rich repeat (LRR) protein","K11323","vcn:VOLCADRAFT_121342","histone arginine demethylase JMJD6 [EC:1.14.11.-]","GO:0010102//lateral root morphogenesis;GO:0045595//regulation of cell differentiation;GO:0016049//cell growth;GO:0010090//trichome morphogenesis;GO:0071555//cell wall organization;GO:0010014//meristem initiation;GO:0009733//response to auxin stimulus;GO:0048589//developmental growth;GO:0007155//cell adhesion;GO:0048765//root hair cell differentiation;GO:0045010//actin nucleation","-","GO:0009506//plasmodesma;GO:0005634//nucleus;GO:0005886//plasma membrane"]
[978,"CSE_Unigene18492","SW_Unigene18494","-","+","-",1839,{"v":0.996,"d":"99.60%"},8,5,3,{"v":0.192562,"d":"0.193"},{"v":0.0245273,"d":"0.0245"},"gi|225445848|ref|XP_002278056.1|","PREDICTED: signal recognition particle receptor subunit alpha [Vitis vinifera]","gi|225445847|ref|XM_002278020.1|","PREDICTED: Vitis vinifera signal recognition particle receptor subunit alpha-like (LOC100256941), mRNA","sp|P49971|SR541_SOLLC","Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1","COG0552","Signal recognition particle GTPase","K13431","vvi:100256941","signal recognition particle receptor subunit alpha","GO:0006944//cellular membrane fusion;GO:0006623//protein targeting to vacuole;GO:0006184//GTP catabolic process;GO:0048193//Golgi vesicle transport;GO:0006614//SRP-dependent cotranslational protein targeting to membrane","GO:0005047//signal recognition particle binding;GO:0005525//GTP binding;GO:0003924//GTPase activity","GO:0005786//signal recognition particle, endoplasmic reticulum targeting;GO:0005785//signal recognition particle receptor complex"]
[979,"CSE_Unigene1857","SW_Unigene22355","-","+","-",1053,{"v":0.998,"d":"99.80%"},2,2,"NA",{"v":0,"d":"0.000"},"NA","gi|296084808|emb|CBI27690.3|","unnamed protein product [Vitis vinifera]","gi|225463229|ref|XM_002268382.1|","PREDICTED: Vitis vinifera E3 ubiquitin-protein ligase CHFR-like (LOC100266579), mRNA","-","-","-","-","-","-","-","GO:0043247//telomere maintenance in response to DNA damage;GO:0010332//response to gamma radiation;GO:0045132//meiotic chromosome segregation;GO:0042138//meiotic DNA double-strand break formation;GO:0007062//sister chromatid cohesion;GO:0007131//reciprocal meiotic recombination;GO:0032204//regulation of telomere maintenance","GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[980,"CSE_Unigene18591","SW_Unigene7528","-","+","-",1431,{"v":0.98,"d":"98.00%"},28,{"v":15.1916,"d":"15"},{"v":12.8084,"d":"13"},{"v":0.220435,"d":"0.220"},{"v":2.9548e-05,"d":"0.0000"},"gi|225455167|ref|XP_002269909.1|","PREDICTED: UNC93-like protein C922.05c [Vitis vinifera] >gi|302144007|emb|CBI23112.3| unnamed protein product [Vitis vinifera]","gi|359490775|ref|XM_002269873.2|","PREDICTED: Vitis vinifera UNC93-like protein C922.05c (LOC100264126), mRNA","sp|Q8LG53|UN932_ARATH","UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2","-","-","K01115","vcn:VOLCADRAFT_99471","phospholipase D [EC:3.1.4.4]","GO:0055085//transmembrane transport","-","GO:0016021//integral to membrane"]
[981,"CSE_Unigene186","SW_CL3785_Contig1","-","+","-",1476,{"v":0.995,"d":"99.50%"},8,7,1,{"v":0.0539722,"d":"0.054"},{"v":0.000702345,"d":"0.0007"},"gi|359495935|ref|XP_003635118.1|","PREDICTED: ribosome biogenesis protein BOP1 homolog [Vitis vinifera]","gi|359495934|ref|XM_003635070.1|","PREDICTED: Vitis vinifera ribosome biogenesis protein BOP1 homolog (LOC100251720), mRNA","sp|A8ID74|BOP1_CHLRE","Ribosome biogenesis protein BOP1 homolog OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_111274 PE=3 SV=2","COG2319","FOG: WD40 repeat","K14824","vvi:100251720","ribosome biogenesis protein ERB1","GO:0051726//regulation of cell cycle;GO:0006364//rRNA processing;GO:0051604//protein maturation","GO:0000166//nucleotide binding","GO:0005634//nucleus;GO:0005829//cytosol"]
[982,"CSE_Unigene18728","SW_Unigene22525","-","+","-",4986,{"v":0.991,"d":"99.10%"},46,25,21,{"v":0.247354,"d":"0.247"},{"v":3.76719e-06,"d":"0.0000"},"gi|359480508|ref|XP_003632479.1|","PREDICTED: putative uncharacterized protein At4g01020, chloroplastic-like [Vitis vinifera]","gi|147859063|emb|AM433955.2|","Vitis vinifera contig VV78X126682.16, whole genome shotgun sequence","sp|Q38953|DHX8_ARATH","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2","COG1643","HrpA-like helicases","K12818","ath:AT3G26560","ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]","-","GO:0008026//ATP-dependent helicase activity;GO:0003676//nucleic acid binding;GO:0005524//ATP binding;GO:0008270//zinc ion binding","GO:0005634//nucleus"]
[983,"CSE_Unigene18772","SW_CL5484_Contig2","-","+","-",948,{"v":0.997,"d":"99.70%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|225455710|ref|XP_002266732.1|","PREDICTED: D-aminoacyl-tRNA deacylase [Vitis vinifera] >gi|297734103|emb|CBI15350.3| unnamed protein product [Vitis vinifera]","gi|359490898|ref|XM_002266696.2|","PREDICTED: Vitis vinifera D-aminoacyl-tRNA deacylase-like (LOC100245778), mRNA","sp|Q9ZPQ3|GEK1_ARATH","D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GN=GEK1 PE=1 SV=2","COG1650","Uncharacterized protein conserved in archaea","-","-","-","GO:0009644//response to high light intensity;GO:0042542//response to hydrogen peroxide;GO:0009636//response to toxic substance","GO:0051499//D-aminoacyl-tRNA deacylase activity","GO:0009507//chloroplast;GO:0005829//cytosol"]
[984,"CSE_Unigene18824","SW_Unigene15020","-","+","-",309,{"v":1,"d":"100.00%"},0,"NA","NA","NA","NA","gi|147795294|emb|CAN64992.1|","hypothetical protein VITISV_001775 [Vitis vinifera]","gi|359475366|ref|XM_002282231.2|","PREDICTED: Vitis vinifera methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like (LOC100253805), mRNA","sp|Q9LDD8|MCCB_ARATH","Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Arabidopsis thaliana GN=MCCB PE=2 SV=1","COG4799","Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)","K01969","vvi:100253805","3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]","GO:0009616//virus induced gene silencing;GO:0010050//vegetative phase change;GO:0006552//leucine catabolic process","GO:0008270//zinc ion binding;GO:0050897//cobalt ion binding;GO:0004075//biotin carboxylase activity;GO:0004485//methylcrotonoyl-CoA carboxylase activity","GO:0005759//mitochondrial matrix"]
[985,"CSE_Unigene18873","SW_Unigene3861","-","+","-",1698,{"v":0.991,"d":"99.10%"},16,4,12,{"v":0.655703,"d":"0.656"},{"v":0.467612,"d":"0.4676"},"gi|225456581|ref|XP_002265588.1|","PREDICTED: uncharacterized protein LOC100263840 [Vitis vinifera] >gi|297734071|emb|CBI15318.3| unnamed protein product [Vitis vinifera]","gi|225456580|ref|XM_002265552.1|","PREDICTED: Vitis vinifera uncharacterized LOC100263840 (LOC100263840), mRNA","-","-","-","-","-","-","-","-","-","-"]
[986,"CSE_Unigene18965","SW_Unigene19147","-","+","-",1653,{"v":0.989,"d":"98.90%"},18,9,9,{"v":0.303699,"d":"0.304"},{"v":0.0124679,"d":"0.0125"},"gi|359486687|ref|XP_002265345.2|","PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera] >gi|296085948|emb|CBI31389.3| unnamed protein product [Vitis vinifera]","gi|359486686|ref|XM_002265309.2|","PREDICTED: Vitis vinifera NAC domain-containing protein 78-like (LOC100242836), mRNA","sp|Q84K00|NAC78_ARATH","NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2","-","-","-","-","-","GO:0009819//drought recovery;GO:0009873//ethylene mediated signaling pathway;GO:0009753//response to jasmonic acid stimulus;GO:2000377//regulation of reactive oxygen species metabolic process;GO:0009962//regulation of flavonoid biosynthetic process;GO:0042538//hyperosmotic salinity response;GO:0000303//response to superoxide;GO:0009644//response to high light intensity;GO:0010150//leaf senescence;GO:0009738//abscisic acid mediated signaling pathway;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0009743//response to carbohydrate stimulus;GO:0009733//response to auxin stimulus","GO:0046982//protein heterodimerization activity;GO:0003677//DNA binding;GO:0003700//sequence-specific DNA binding transcription factor activity;GO:0042803//protein homodimerization activity","GO:0005737//cytoplasm;GO:0005886//plasma membrane;GO:0005634//nucleus"]
[987,"CSE_Unigene19147","SW_Unigene22666","-","+","-",987,{"v":0.991,"d":"99.10%"},9,4,5,{"v":0.318045,"d":"0.318"},{"v":0.0904506,"d":"0.0905"},"gi|225435790|ref|XP_002285744.1|","PREDICTED: uncharacterized protein LOC100241562 [Vitis vinifera]","gi|359478471|ref|XM_002285708.2|","PREDICTED: Vitis vinifera uncharacterized LOC100241562 (LOC100241562), mRNA","sp|F4J117|LSF1_ARATH","Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana GN=LSF1 PE=1 SV=1","-","-","-","-","-","GO:0010264//myo-inositol hexakisphosphate biosynthetic process;GO:0009611//response to wounding;GO:0016117//carotenoid biosynthetic process;GO:0015979//photosynthesis","-","GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane;GO:0009570//chloroplast stroma"]
[988,"CSE_Unigene19197","SW_Unigene14460","-","+","-",2586,{"v":0.995,"d":"99.50%"},13,8,5,{"v":0.280239,"d":"0.280"},{"v":0.0225067,"d":"0.0225"},"gi|225436347|ref|XP_002270926.1|","PREDICTED: uncharacterized protein LOC100261914 [Vitis vinifera] >gi|297734852|emb|CBI17086.3| unnamed protein product [Vitis vinifera]","gi|359479391|ref|XM_002270890.2|","PREDICTED: Vitis vinifera uncharacterized LOC100261914 (LOC100261914), mRNA","-","-","-","-","K11323","vcn:VOLCADRAFT_121342","histone arginine demethylase JMJD6 [EC:1.14.11.-]","GO:0016226//iron-sulfur cluster assembly;GO:0010027//thylakoid membrane organization;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0009658//chloroplast organization;GO:0048481//ovule development;GO:0008356//asymmetric cell division;GO:0009793//embryo development ending in seed dormancy","-","GO:0009941//chloroplast envelope;GO:0009535//chloroplast thylakoid membrane;GO:0005886//plasma membrane"]
[989,"CSE_Unigene19317","SW_Unigene14100","-","+","-",2514,{"v":0.998,"d":"99.80%"},5,4,1,{"v":0.0870971,"d":"0.087"},{"v":0.0166421,"d":"0.0166"},"gi|296087356|emb|CBI33730.3|","unnamed protein product [Vitis vinifera]","gi|225438919|ref|XM_002279254.1|","PREDICTED: Vitis vinifera tetratricopeptide repeat protein 13-like (LOC100264606), mRNA","sp|Q9M8Y0|SEC_ARATH","Probable UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1","COG0457","FOG: TPR repeat","K09667","ath:AT3G04240","polypeptide N-acetylglucosaminyltransferase [EC:2.4.1.-]","GO:0000278//mitotic cell cycle;GO:0010048//vernalization response;GO:0006396//RNA processing;GO:0031348//negative regulation of defense response;GO:0043687//post-translational protein modification;GO:0006346//methylation-dependent chromatin silencing;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0009816//defense response to bacterium, incompatible interaction;GO:0016246//RNA interference","GO:0032947//protein complex scaffold","GO:0005739//mitochondrion;GO:0048471//perinuclear region of cytoplasm;GO:0005634//nucleus"]
[990,"CSE_Unigene19320","SW_Unigene6956","-","+","-",2262,{"v":0.992,"d":"99.20%"},16,10,6,{"v":0.276166,"d":"0.276"},{"v":0.00252379,"d":"0.0025"},"gi|359490801|ref|XP_002277892.2|","PREDICTED: dipeptidyl peptidase 8-like [Vitis vinifera] >gi|302143902|emb|CBI23007.3| unnamed protein product [Vitis vinifera]","gi|359490800|ref|XM_002277856.2|","PREDICTED: Vitis vinifera dipeptidyl peptidase 8-like (LOC100241749), mRNA","-","-","COG1506","Dipeptidyl aminopeptidases/acylaminoacyl-peptidases","K01278","rcu:RCOM_1243220","dipeptidyl-peptidase 4 [EC:3.4.14.5]","GO:0006508//proteolysis","GO:0008236//serine-type peptidase activity","GO:0005829//cytosol;GO:0005886//plasma membrane"]
[991,"CSE_Unigene19459","SW_Unigene18965","-","+","-",4092,{"v":0.995,"d":"99.50%"},21,18,3,{"v":0.0474637,"d":"0.047"},{"v":1.2077e-09,"d":"0.0000"},"gi|359481183|ref|XP_003632587.1|","PREDICTED: regulatory-associated protein of TOR 1-like isoform 1 [Vitis vinifera] >gi|297735579|emb|CBI18073.3| unnamed protein product [Vitis vinifera]","gi|359481182|ref|XM_003632539.1|","PREDICTED: Vitis vinifera regulatory-associated protein of TOR 1-like, transcript variant 1 (LOC100261889), mRNA","sp|Q93YQ1|RTOR1_ARATH","Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana GN=RAPTOR1 PE=1 SV=1","COG2319","FOG: WD40 repeat","K07204","vvi:100261889","regulatory associated protein of mTOR","GO:0000911//cytokinesis by cell plate formation;GO:0045595//regulation of cell differentiation;GO:0016049//cell growth;GO:0010431//seed maturation;GO:0009880//embryonic pattern specification;GO:0010072//primary shoot apical meristem specification;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0007062//sister chromatid cohesion;GO:0006487//protein N-linked glycosylation","GO:0005515//protein binding;GO:0000166//nucleotide binding","GO:0080008//Cul4-RING ubiquitin ligase complex"]
[992,"CSE_Unigene19470","SW_Unigene11201","-","+","-",639,{"v":0.994,"d":"99.40%"},4,4,"NA",{"v":0,"d":"0.000"},"NA","gi|359485367|ref|XP_002273712.2|","PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Vitis vinifera]","gi|359485366|ref|XM_002273676.2|","PREDICTED: Vitis vinifera transcription initiation factor TFIID subunit 1-A-like (LOC100254115), mRNA","sp|Q8LRK9|TAF1A_ARATH","Transcription initiation factor TFIID subunit 1-A OS=Arabidopsis thaliana GN=HAF1 PE=2 SV=1","COG5179","Transcription initiation factor TFIID, subunit TAF1","K03125","vvi:100254115","transcription initiation factor TFIID subunit 1","GO:0009294//DNA mediated transformation;GO:0009416//response to light stimulus;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation;GO:0016573//histone acetylation;GO:0006366//transcription from RNA polymerase II promoter","GO:0003712//transcription cofactor activity;GO:0003677//DNA binding;GO:0004402//histone acetyltransferase activity","GO:0005669//transcription factor TFIID complex;GO:0016020//membrane"]
[993,"CSE_Unigene19597","SW_CL3748_Contig1","-","+","-",1311,{"v":0.987,"d":"98.70%"},17,8,9,{"v":0.397696,"d":"0.398"},{"v":0.0853898,"d":"0.0854"},"gi|225470790|ref|XP_002269656.1|","PREDICTED: protein disulfide-isomerase 5-2 [Vitis vinifera]","gi|359493223|ref|XM_002269620.2|","PREDICTED: Vitis vinifera protein disulfide-isomerase 5-2-like (LOC100251498), mRNA","sp|Q94F09|PDI52_ARATH","Protein disulfide-isomerase 5-2 OS=Arabidopsis thaliana GN=PDIL5-2 PE=2 SV=1","COG0526","Thiol-disulfide isomerase and thioredoxins","K09580","ath:AT1G21750","protein disulfide-isomerase A1 [EC:5.3.4.1]","GO:0006662//glycerol ether metabolic process;GO:0009086//methionine biosynthetic process;GO:0006457//protein folding;GO:0030244//cellulose biosynthetic process;GO:0045454//cell redox homeostasis;GO:0048193//Golgi vesicle transport;GO:0000394//RNA splicing, via endonucleolytic cleavage and ligation","GO:0003756//protein disulfide isomerase activity;GO:0009055//electron carrier activity;GO:0015035//protein disulfide oxidoreductase activity","GO:0009506//plasmodesma;GO:0009505//plant-type cell wall;GO:0005774//vacuolar membrane;GO:0009507//chloroplast;GO:0005783//endoplasmic reticulum;GO:0005886//plasma membrane"]
[994,"CSE_Unigene1966","SW_Unigene16196","-","+","-",2061,{"v":0.994,"d":"99.40%"},12,5,7,{"v":0.469849,"d":"0.470"},{"v":0.16123,"d":"0.1612"},"gi|225435417|ref|XP_002285398.1|","PREDICTED: sulfite reductase [ferredoxin] [Vitis vinifera] >gi|297746302|emb|CBI16358.3| unnamed protein product [Vitis vinifera]","gi|225435416|ref|XM_002285362.1|","PREDICTED: Vitis vinifera sulfite reductase [ferredoxin]-like (LOC100245032), mRNA","sp|O82802|SIR1_TOBAC","Sulfite reductase 1 [ferredoxin], chloroplastic OS=Nicotiana tabacum GN=SIR1 PE=1 SV=1","COG0155","Sulfite reductase, beta subunit (hemoprotein)","K00392","vvi:100245032","sulfite reductase (ferredoxin) [EC:1.8.7.1]","GO:0016126//sterol biosynthetic process;GO:0006833//water transport;GO:0009651//response to salt stress;GO:0006972//hyperosmotic response;GO:0007030//Golgi organization;GO:0006096//glycolysis;GO:0019761//glucosinolate biosynthetic process;GO:0046686//response to cadmium ion;GO:0009409//response to cold;GO:0009684//indoleacetic acid biosynthetic process;GO:0019344//cysteine biosynthetic process;GO:0019419//sulfate reduction","GO:0050311//sulfite reductase (ferredoxin) activity;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0020037//heme binding;GO:0016002//sulfite reductase activity;GO:0005507//copper ion binding","GO:0009941//chloroplast envelope;GO:0048046//apoplast;GO:0010319//stromule;GO:0016020//membrane;GO:0005829//cytosol;GO:0009570//chloroplast stroma"]
[995,"CSE_Unigene19897","SW_Unigene8227","-","+","-",2661,{"v":0.997,"d":"99.70%"},9,6,3,{"v":0.18508,"d":"0.185"},{"v":0.0150837,"d":"0.0151"},"gi|359475304|ref|XP_003631645.1|","PREDICTED: coatomer subunit gamma-2-like [Vitis vinifera] >gi|297741448|emb|CBI32579.3| unnamed protein product [Vitis vinifera]","gi|359475303|ref|XM_003631597.1|","PREDICTED: Vitis vinifera coatomer subunit gamma-2-like (LOC100853178), mRNA","sp|Q6Z382|COPG2_ORYSJ","Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1","COG5240","Vesicle coat complex COPI, gamma subunit","K12392","gmx:100784577","AP-1 complex subunit beta-1","GO:0016192//vesicle-mediated transport;GO:0006886//intracellular protein transport","GO:0005198//structural molecule activity","GO:0009507//chloroplast;GO:0030126//COPI vesicle coat"]
[996,"CSE_Unigene20088","SW_Unigene13059","-","+","-",7326,{"v":0.994,"d":"99.40%"},43,27,16,{"v":0.184089,"d":"0.184"},{"v":6.08044e-08,"d":"0.0000"},"gi|359475536|ref|XP_002275591.2|","PREDICTED: serine/threonine-protein kinase TOR-like isoform 1 [Vitis vinifera]","gi|359475535|ref|XM_002275555.2|","PREDICTED: Vitis vinifera serine/threonine-protein kinase TOR-like, transcript variant 1 (LOC100249713), mRNA","sp|Q9FR53|TOR_ARATH","Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana GN=TOR PE=1 SV=1","COG5032","Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family","K07203","vvi:100249713","FKBP12-rapamycin complex-associated protein","GO:0010507//negative regulation of autophagy;GO:0030307//positive regulation of cell growth;GO:0009880//embryonic pattern specification;GO:0007131//reciprocal meiotic recombination;GO:0010431//seed maturation;GO:0007155//cell adhesion;GO:0000911//cytokinesis by cell plate formation;GO:0045010//actin nucleation;GO:0045132//meiotic chromosome segregation;GO:0033044//regulation of chromosome organization;GO:0009407//toxin catabolic process;GO:0042138//meiotic DNA double-strand break formation;GO:0016310//phosphorylation;GO:0009303//rRNA transcription;GO:0010090//trichome morphogenesis;GO:0040019//positive regulation of embryonic development;GO:0048765//root hair cell differentiation;GO:0010228//vegetative to reproductive phase transition of meristem;GO:0045595//regulation of cell differentiation;GO:0009887//organ morphogenesis;GO:0045893//positive regulation of transcription, DNA-dependent;GO:0007062//sister chromatid cohesion;GO:2000234//positive regulation of rRNA processing;GO:0010072//primary shoot apical meristem specification;GO:0071555//cell wall organization","GO:0016303//1-phosphatidylinositol-3-kinase activity;GO:0008144//drug binding;GO:0043621//protein self-association;GO:0042802//identical protein binding;GO:0000975//regulatory region DNA binding;GO:0005524//ATP binding","GO:0005737//cytoplasm;GO:0005886//plasma membrane;GO:0005634//nucleus"]
[997,"CSE_Unigene20093","SW_Unigene13796","-","+","-",2178,{"v":0.983,"d":"98.30%"},36,{"v":15.6304,"d":"16"},{"v":20.3696,"d":"20"},{"v":0.43575,"d":"0.436"},{"v":0.0186306,"d":"0.0186"},"gi|359489932|ref|XP_002266946.2|","PREDICTED: uncharacterized protein LOC100244234 [Vitis vinifera]","gi|359489931|ref|XM_002266910.2|","PREDICTED: Vitis vinifera uncharacterized LOC100244234 (LOC100244234), mRNA","-","-","-","-","-","-","-","-","GO:0005543//phospholipid binding","GO:0005773//vacuole;GO:0005783//endoplasmic reticulum"]
[998,"CSE_Unigene20137","SW_Unigene21745","-","+","-",2892,{"v":0.991,"d":"99.10%"},20,{"v":8.56816,"d":"9"},{"v":11.4318,"d":"11"},{"v":0.406966,"d":"0.407"},{"v":0.0562755,"d":"0.0563"},"gi|359479944|ref|XP_002270510.2|","PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Vitis vinifera]","gi|359479943|ref|XM_002270474.2|","PREDICTED: Vitis vinifera probable glutamyl endopeptidase, chloroplastic-like (LOC100243431), mRNA","sp|Q8VZF3|CGEP_ARATH","Probable glutamyl endopeptidase, chloroplastic OS=Arabidopsis thaliana GN=GEP PE=2 SV=2","COG1506","Dipeptidyl aminopeptidases/acylaminoacyl-peptidases","K01278","zma:100381646","dipeptidyl-peptidase 4 [EC:3.4.14.5]","GO:0006508//proteolysis","GO:0004252//serine-type endopeptidase activity","GO:0009570//chloroplast stroma"]
[999,"CSE_Unigene20184","SW_Unigene13807","-","+","-",3552,{"v":0.994,"d":"99.40%"},22,17,5,{"v":0.118996,"d":"0.119"},{"v":3.70122e-06,"d":"0.0000"},"gi|225435213|ref|XP_002282042.1|","PREDICTED: carbamoyl-phosphate synthase large chain-like [Vitis vinifera]","gi|225435212|ref|XM_002282006.1|","PREDICTED: Vitis vinifera carbamoyl-phosphate synthase large chain-like (LOC100262205), mRNA","sp|O04983|ACCC_ARATH","Biotin carboxylase, chloroplastic OS=Arabidopsis thaliana GN=CAC2 PE=1 SV=1","COG0458","Carbamoylphosphate synthase large subunit (split gene in MJ)","K01955","vvi:100262205","carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]","GO:0007010//cytoskeleton organization;GO:0016036//cellular response to phosphate starvation;GO:0006094//gluconeogenesis;GO:0051567//histone H3-K9 methylation;GO:0010498//proteasomal protein catabolic process;GO:0006342//chromatin silencing;GO:0006526//arginine biosynthetic process","GO:0046872//metal ion binding;GO:0004088//carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity;GO:0005524//ATP binding;GO:0004087//carbamoyl-phosphate synthase (ammonia) activity","GO:0016020//membrane;GO:0005951//carbamoyl-phosphate synthase complex;GO:0005829//cytosol;GO:0009570//chloroplast stroma;GO:0005739//mitochondrion"]
[1000,"CSE_Unigene20516","SW_Unigene18547","-","+","-",1572,{"v":0.991,"d":"99.10%"},14,8,6,{"v":0.240404,"d":"0.240"},{"v":0.00885153,"d":"0.0089"},"gi|225428430|ref|XP_002280414.1|","PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis vinifera]","gi|225428429|ref|XM_002280378.1|","PREDICTED: Vitis vinifera adoMet-dependent rRNA methyltransferase spb1-like (LOC100255646), mRNA","sp|Q7XTT4|NUCL2_ORYSJ","Nucleolin 2 OS=Oryza sativa subsp. japonica GN=Os04g0620700 PE=2 SV=2","COG0293","23S rRNA methylase","K14857","vvi:100255646","AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]","GO:0019243//methylglyoxal catabolic process to D-lactate;GO:0001510//RNA methylation;GO:0006364//rRNA processing","GO:0003676//nucleic acid binding;GO:0008168//methyltransferase activity","GO:0005634//nucleus"]
[1001,"CSE_Unigene20525","SW_Unigene15953","-","+","-",6771,{"v":0.997,"d":"99.70%"},21,13,8,{"v":0.172422,"d":"0.172"},{"v":9.10655e-05,"d":"0.0001"},"gi|225459364|ref|XP_002285808.1|","PREDICTED: acetyl-CoA carboxylase 1-like [Vitis vinifera]","gi|225459363|ref|XM_002285772.1|","PREDICTED: Vitis vinifera acetyl-CoA carboxylase 1-like (LOC100247288), mRNA","sp|Q38970|ACC1_ARATH","Acetyl-CoA carboxylase 1 OS=Arabidopsis thaliana GN=ACC1 PE=1 SV=1","COG4799","Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)","K11262","vvi:100247288","acetyl-CoA carboxylase / biotin carboxylase [EC:6.4.1.2 6.3.4.14]","GO:0048364//root development;GO:0009735//response to cytokinin stimulus;GO:0010072//primary shoot apical meristem specification;GO:0030497//fatty acid elongation","GO:0003989//acetyl-CoA carboxylase activity;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0004075//biotin carboxylase activity","GO:0005886//plasma membrane"]
[1002,"CSE_Unigene20679","SW_Unigene22059","-","+","-",1353,{"v":0.994,"d":"99.40%"},8,8,"NA",{"v":0,"d":"0.000"},"NA","gi|225454716|ref|XP_002271887.1|","PREDICTED: V-type proton ATPase subunit H-like [Vitis vinifera]","gi|359491868|ref|XM_002275292.2|","PREDICTED: Vitis vinifera uncharacterized LOC100263332 (LOC100263332), mRNA","sp|Q9LX65|VATH_ARATH","V-type proton ATPase subunit H OS=Arabidopsis thaliana GN=VHA-H PE=2 SV=1","COG5231","Vacuolar H+-ATPase V1 sector, subunit H","K02144","vvi:100240790","V-type H+-transporting ATPase 54 kD subunit [EC:3.6.3.14]","GO:0006623//protein targeting to vacuole;GO:0006816//calcium ion transport;GO:0009651//response to salt stress;GO:0015991//ATP hydrolysis coupled proton transport;GO:0000902//cell morphogenesis;GO:0007033//vacuole organization;GO:0007030//Golgi organization;GO:0048193//Golgi vesicle transport;GO:0006486//protein glycosylation;GO:0016049//cell growth","GO:0046961//proton-transporting ATPase activity, rotational mechanism;GO:0020037//heme binding","GO:0000325//plant-type vacuole;GO:0009507//chloroplast;GO:0005794//Golgi apparatus;GO:0000221//vacuolar proton-transporting V-type ATPase, V1 domain;GO:0005886//plasma membrane;GO:0005634//nucleus"]
[1003,"CSE_Unigene20804","SW_Unigene22199","-","+","-",2955,{"v":0.992,"d":"99.20%"},24,17,7,{"v":0.13503,"d":"0.135"},{"v":2.82325e-06,"d":"0.0000"},"gi|225429981|ref|XP_002284012.1|","PREDICTED: uncharacterized protein KIAA0090 homolog [Vitis vinifera] >gi|296081867|emb|CBI20872.3| unnamed protein product [Vitis vinifera]","gi|225429980|ref|XM_002283976.1|","PREDICTED: Vitis vinifera uncharacterized LOC100264673 (LOC100264673), mRNA","-","-","-","-","-","-","-","GO:0006888//ER to Golgi vesicle-mediated transport","GO:0003824//catalytic activity","GO:0072546//ER membrane protein complex;GO:0005794//Golgi apparatus;GO:0016023//cytoplasmic membrane-bounded vesicle;GO:0005886//plasma membrane;GO:0005774//vacuolar membrane;GO:0009507//chloroplast"]
[1004,"CSE_Unigene21424","SW_Unigene6925","-","+","-",927,{"v":0.994,"d":"99.40%"},6,3,3,{"v":0.295087,"d":"0.295"},{"v":0.136817,"d":"0.1368"},"gi|296086109|emb|CBI31550.3|","unnamed protein product [Vitis vinifera]","gi|349720563|emb|FQ381810.1|","Vitis vinifera clone SS0ABG82YP07","sp|P59277|SYP81_ARATH","Syntaxin-81 OS=Arabidopsis thaliana GN=SYP81 PE=2 SV=2","-","-","K08492","pop:POPTR_567325","syntaxin 18","GO:0000226//microtubule cytoskeleton organization;GO:0016192//vesicle-mediated transport","-","GO:0016020//membrane;GO:0005634//nucleus"]
[1005,"CSE_Unigene319","SW_Unigene14252","-","+","-",534,{"v":0.983,"d":"98.30%"},9,2,7,{"v":1.32624,"d":"1.326"},{"v":0.945232,"d":"0.9452"},"gi|225425619|ref|XP_002270485.1|","PREDICTED: alpha-glucan water dikinase, chloroplastic [Vitis vinifera] >gi|297739096|emb|CBI28585.3| unnamed protein product [Vitis vinifera]","gi|225425618|ref|XM_002270449.1|","PREDICTED: Vitis vinifera alpha-glucan water dikinase, chloroplastic-like (LOC100246568), mRNA","sp|Q8LPT9|GWD1_CITRE","Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1","COG0574","Phosphoenolpyruvate synthase/pyruvate phosphate dikinase","K08244","vvi:100246568","alpha-glucan, water dikinase [EC:2.7.9.4]","GO:0009610//response to symbiotic fungus;GO:0005983//starch catabolic process;GO:0009631//cold acclimation;GO:0016310//phosphorylation","GO:0004673//protein histidine kinase activity;GO:0005524//ATP binding;GO:0050521//alpha-glucan, water dikinase activity","GO:0005739//mitochondrion;GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma"]
[1006,"CSE_Unigene635","SW_Unigene15451","-","+","-",951,{"v":0.987,"d":"98.70%"},12,8,4,{"v":0.191667,"d":"0.192"},{"v":0.00576334,"d":"0.0058"},"gi|225423430|ref|XP_002273643.1|","PREDICTED: folic acid synthesis protein fol1-like [Vitis vinifera]","gi|147774151|emb|AM461419.2|","Vitis vinifera contig VV78X038344.10, whole genome shotgun sequence","-","-","COG0294","Dihydropteroate synthase and related enzymes","K13941","vvi:100252672","2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]","GO:0006979//response to oxidative stress;GO:0046654//tetrahydrofolate biosynthetic process;GO:0016310//phosphorylation","GO:0004156//dihydropteroate synthase activity;GO:0003848//2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity;GO:0016301//kinase activity","GO:0005829//cytosol;GO:0005739//mitochondrion"]
[1007,"CSE_Unigene7256","SW_Unigene23741","-","+","-",243,{"v":0.979,"d":"97.90%"},5,2,3,{"v":0.455882,"d":"0.456"},{"v":0.335527,"d":"0.3355"},"gi|359475466|ref|XP_002268939.2|","PREDICTED: UPF0631 protein At3g19508-like [Vitis vinifera] >gi|296083107|emb|CBI22511.3| unnamed protein product [Vitis vinifera]","gi|359475465|ref|XM_002268903.2|","PREDICTED: Vitis vinifera UPF0631 protein At3g19508-like (LOC100242420), mRNA","sp|Q1G3M2|LYRM9_ARATH","LYR motif-containing protein At3g19508 OS=Arabidopsis thaliana GN=At3g19508 PE=3 SV=1","-","-","-","-","-","-","-","GO:0005739//mitochondrion"]
[1008,"CSE_Unigene7676","SW_Unigene16631","-","+","-",567,{"v":0.995,"d":"99.50%"},3,1,2,{"v":0.75057,"d":"0.751"},{"v":0.59659,"d":"0.5966"},"gi|297735843|emb|CBI18563.3|","unnamed protein product [Vitis vinifera]","gi|359496060|ref|XM_003635094.1|","PREDICTED: Vitis vinifera uncharacterized LOC100244391 (LOC100244391), mRNA","sp|Q9FM03|DOF56_ARATH","Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2","-","-","-","-","-","GO:0006355//regulation of transcription, DNA-dependent","GO:0003677//DNA binding;GO:0008270//zinc ion binding","-"]
[1009,"CSE_Unigene786","SW_Unigene22413","-","+","-",1707,{"v":0.983,"d":"98.30%"},11,8,3,{"v":0.144012,"d":"0.144"},{"v":0.00256215,"d":"0.0026"},"gi|225444599|ref|XP_002274576.1|","PREDICTED: protein Red isoform 1 [Vitis vinifera] >gi|297738505|emb|CBI27750.3| unnamed protein product [Vitis vinifera]","gi|359484496|ref|XM_002274540.2|","PREDICTED: Vitis vinifera protein Red-like, transcript variant 1 (LOC100264670), mRNA","-","-","-","-","K13109","vvi:100264670","IK cytokine","GO:0008380//RNA splicing","-","GO:0005634//nucleus"]
[1010,"CSE_Unigene787","SW_Unigene13289","-","+","-",1686,{"v":0.997,"d":"99.70%"},5,4,1,{"v":0.0764876,"d":"0.076"},{"v":0.0116413,"d":"0.0116"},"gi|225441959|ref|XP_002264087.1|","PREDICTED: uncharacterized protein LOC100254979 isoform 1 [Vitis vinifera]","gi|225441958|ref|XM_002264051.1|","PREDICTED: Vitis vinifera uncharacterized LOC100254979, transcript variant 1 (LOC100254979), mRNA","-","-","-","-","K03691","vvi:100254979","peptide-O-fucosyltransferase [EC:2.4.1.221]","GO:0007020//microtubule nucleation","GO:0016740//transferase activity","GO:0005886//plasma membrane;GO:0005774//vacuolar membrane;GO:0005634//nucleus"]
[1011,"CSE_Unigene791","SW_Unigene17832","-","+","-",1230,{"v":0.985,"d":"98.50%"},16,6,10,{"v":0.6272,"d":"0.627"},{"v":0.393105,"d":"0.3931"},"gi|296085527|emb|CBI29259.3|","unnamed protein product [Vitis vinifera]","gi|147787438|emb|AM423694.2|","Vitis vinifera contig VV78X074158.7, whole genome shotgun sequence","sp|P37707|B2_DAUCA","B2 protein OS=Daucus carota PE=2 SV=1","-","-","K01115","sbi:SORBI_01g031100","phospholipase D [EC:3.1.4.4]","-","-","-"]
[1012,"CSE_Unigene8247","SW_CL7368_Contig2","-","+","-",519,{"v":0.994,"d":"99.40%"},3,1,2,{"v":0.668961,"d":"0.669"},{"v":0.141115,"d":"0.1411"},"gi|225460959|ref|XP_002279917.1|","PREDICTED: uncharacterized protein LOC100258888 [Vitis vinifera] >gi|297737442|emb|CBI26643.3| unnamed protein product [Vitis vinifera]","gi|349704331|emb|FQ394759.1|","Vitis vinifera clone SS0AFA1YB05","-","-","-","-","-","-","-","-","GO:0009055//electron carrier activity;GO:0008137//NADH dehydrogenase (ubiquinone) activity","GO:0016020//membrane;GO:0005739//mitochondrion;GO:0005634//nucleus"]
[1013,"CSE_Unigene829","SW_Unigene17637","-","+","-",3990,{"v":0.991,"d":"99.10%"},36,19,17,{"v":0.258385,"d":"0.258"},{"v":7.36587e-05,"d":"0.0001"},"gi|297733909|emb|CBI15156.3|","unnamed protein product [Vitis vinifera]","gi|359491298|ref|XM_002281360.2|","PREDICTED: Vitis vinifera uncharacterized LOC100262175 (LOC100262175), mRNA","sp|P0CB26|Y1089_ARATH","Uncharacterized protein At1g10890 OS=Arabidopsis thaliana GN=At1g10890 PE=1 SV=1","COG3468","Type V secretory pathway, adhesin AidA","K03254","rcu:RCOM_1434190","translation initiation factor 3 subunit A","-","-","-"]
[1014,"CSE_Unigene83","SW_CL6816_Contig1","-","+","-",726,{"v":0.986,"d":"98.60%"},10,7,3,{"v":0.186478,"d":"0.186"},{"v":0.0118841,"d":"0.0119"},"gi|225470784|ref|XP_002269211.1|","PREDICTED: alpha-(1,4)-fucosyltransferase [Vitis vinifera] >gi|147812436|emb|CAN67769.1| hypothetical protein VITISV_039237 [Vitis vinifera] >gi|296081071|emb|CBI18265.3| unnamed protein product [Vitis vinifera]","gi|359493204|ref|XM_002269175.2|","PREDICTED: Vitis vinifera alpha-(1,4)-fucosyltransferase-like (LOC100256631), mRNA","sp|Q9C8W3|FUT13_ARATH","Alpha-(1,4)-fucosyltransferase OS=Arabidopsis thaliana GN=FUT13 PE=2 SV=2","-","-","K14412","vvi:100256631","alpha-1,4-fucosyltransferase [EC:2.4.1.-]","GO:0010493//Lewis a epitope biosynthetic process;GO:0036065//fucosylation;GO:0006486//protein glycosylation","GO:0008417//fucosyltransferase activity","GO:0032580//Golgi cisterna membrane;GO:0016021//integral to membrane"]
[1015,"CSE_Unigene8481","SW_Unigene8051","-","+","-",630,{"v":0.986,"d":"98.60%"},9,6,3,{"v":0.130844,"d":"0.131"},{"v":0.00403708,"d":"0.0040"},"gi|359474514|ref|XP_002279781.2|","PREDICTED: uncharacterized protein LOC100257446 [Vitis vinifera]","gi|359474513|ref|XM_002279745.2|","PREDICTED: Vitis vinifera uncharacterized LOC100257446 (LOC100257446), mRNA","sp|O81765|PLRX4_ARATH","Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=PEX4 PE=2 SV=1","-","-","-","-","-","-","-","-"]
[1016,"CSE_Unigene9627","SW_Unigene21807","-","+","-",870,{"v":0.986,"d":"98.60%"},9,2,7,{"v":1.59213,"d":"1.592"},{"v":0.694034,"d":"0.6940"},"gi|225424144|ref|XP_002283966.1|","PREDICTED: fruit protein pKIWI502 [Vitis vinifera]","gi|359472898|ref|XM_002283930.2|","PREDICTED: Vitis vinifera fruit protein pKIWI502-like (LOC100255949), mRNA","sp|P43394|K502_ACTDE","Fruit protein pKIWI502 OS=Actinidia deliciosa GN=pKIWI502 PE=2 SV=1","COG0543","2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases","K03006","sbi:SORBI_07g003680","DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]","GO:0055114//oxidation-reduction process","GO:0016491//oxidoreductase activity;GO:0005507//copper ion binding","GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma;GO:0009579//thylakoid"]
[1017,"CSE_Unigene9677","SW_CL7572_Contig1","-","+","-",1344,{"v":0.995,"d":"99.50%"},7,4,3,{"v":0.283491,"d":"0.283"},{"v":0.0956123,"d":"0.0956"},"gi|225444019|ref|XP_002281594.1|","PREDICTED: cleavage and polyadenylation specificity factor CPSF30-like [Vitis vinifera]","gi|225444018|ref|XM_002281558.1|","PREDICTED: Vitis vinifera cleavage and polyadenylation specificity factor CPSF30-like (LOC100253258), mRNA","sp|A9LNK9|CPSF_ARATH","Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1","COG5084","Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins","K14404","cme:CMF161C","cleavage and polyadenylation specificity factor subunit 4","GO:0000278//mitotic cell cycle;GO:0006979//response to oxidative stress;GO:1900363//regulation of mRNA polyadenylation","GO:0003723//RNA binding;GO:0005516//calmodulin binding;GO:0008270//zinc ion binding;GO:0004521//endoribonuclease activity","GO:0005847//mRNA cleavage and polyadenylation specificity factor complex"]
[1018,"CSE_Unigene9983","SW_Unigene11247","-","+","-",798,{"v":0.996,"d":"99.60%"},3,3,"NA",{"v":0,"d":"0.000"},"NA","gi|359497835|ref|XP_002268403.2|","PREDICTED: probable WRKY transcription factor 11-like, partial [Vitis vinifera]","gi|359497834|ref|XM_002268367.2|","PREDICTED: Vitis vinifera probable WRKY transcription factor 11-like (LOC100267695), partial mRNA","sp|O04336|WRK21_ARATH","Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1","-","-","K13425","pop:POPTR_755334","WRKY transcription factor 22","-","-","-"]

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["Table S3 List of individuals included in this study, with corresponding sampling localities and GenBank accession numbers"]
["Individual ID","Region","Locations","Latitude (°N)","Longitude ( °E)","Altitude (m)","GenBank No."]
[{"$nulls":6},"Th-41",null,"ThR-3",null,"ThR-6",null,"ThR-7",null,"ThR-11",null,"ThR-28",null,"ThR-31",null,"ThR-34"]
["E1","South/East China","Jianyang, Fujian",27.17,117.84,725,"MF997610","MF997611","MF997670","MF997671","MF997728","MF997729","MF997808","MF997809","MF997844","MF997845","MF997904","MF997905","MF997962","MF997963","MF998022","MF998023"]
["E2","South/East China","Jianyang, Fujian",27.17,117.84,725,"MF997646","MF997647","MF997706","MF997707","MF997768","MF997769","MF997824","MF997825","MF997876","MF997877","MF997942","MF997943","MF998000","MF998001","MF998060","MF998061"]
["E3","South/East China","Jianyang, Fujian",27.17,117.84,725,"MF997608 ","MF997609","MF997668","MF997669","MF997726","MF997727","MF997788","MF997789","MF997842","MF997843","MF997902","MF997903","MF997960","MF997961","MF998020","MF998021"]
["E4","South/East China","Kaihua, Zhejiang",29.46,118.31,481,"MF997644","MF997645","MF997704","MF997705","MF997762","MF997763","MF997820","MF997821","MF997878","MF997879","MF997938","MF997939","MF997996","MF997997","MF998056","MF998057"]
["E5","South/East China","Kaihua, Zhejiang",29.46,118.31,481,"MF997642","MF997643","MF997702","MF997703","MF997760","MF997761","MF997822","MF997823","MF997880","MF997881","MF997940","MF997941","MF997998","MF997999","MF998058","MF998059"]
["E6","South/East China","Fuyang, Zhejiang",{"v":30,"d":"30.00"},119.72,320,"MF997656","MF997657","MF997714","MF997715","MF997774","MF997775","MF997832","MF997833","MF997890","MF997891","MF997948","MF997949","MF998008","MF998009","MF998068","MF998069"]
["E7","South/East China","Ningbo, Zhejiang",30.35,122.32,162,"MF997654","MF997655","MF997712","MF997713","MF997772","MF997773","MF997830","MF997831","MF997888","MF997889","MF997946","MF997947","MF998006","MF998007","MF998066","MF998067"]
["E8","South/East China","Ningbo, Zhejiang",30.35,122.32,162,"MF997658","MF997659","MF997716","MF997717","MF997776","MF997777","MF997834","MF997835","MF997892","MF997893","MF997950","MF997951","MF998010","MF998011","MF998070","MF998071"]
["E9","South/East China","Jinggangshan, Jiangxi",26.75,114.28,305,"MF997652","MF997653","MF997694","MF997695","MF997770","MF997771","MF997786 ","MF997787","MF997886","MF997887","MF997926","MF997927","MF997984","MF997985","MF998044","MF998045"]
["E10","South/East China","Jinggangshan, Jiangxi",26.75,114.28,305,"MF997616","MF997617","MF997676","MF997677","MF997734","MF997735","MF997794","MF997795","MF997850","MF997851","MF997910","MF997911","MF997968","MF997969","MF998028","MF998029"]
["E11","South/East China","Duheng, Guangdong",24.78,114.29,267,"MF997660","MF997661","MF997718","MF997719","MF997778","MF997779","—","—","MF997894","MF997895","MF997952","MF997953","MF998012","MF998013","MF998072","MF998073"]
["C1","Central China","Malipo, Yunnan",23.12,104.84,1700,"MF997664","MF997665","MF997722","MF997723","MF997782","MF997783","MF997838","MF997839","MF997898","MF997899","MF997956","MF997957","MF998016","MF998017","MF998076","MF998077"]
["C2","Central China","Malipo, Yunnan",23.12,104.84,1700,"MF997666","MF997667","MF997724","MF997725","MF997784","MF997785","MF997840","MF997841","MF997900","MF997901","MF997958","MF997959","MF998018","MF998019","MF998078","MF998079"]
["C3","Central China","Malipo, Yunnan",23.12,104.84,1700,"MF997636","MF997637","MF997698","MF997699","MF997754","MF997755","MF997814","MF997815","MF997870","MF997871","MF997932","MF997933","MF997990","MF997991","MF998050","MF998051"]
["C4","Central China","Malipo, Yunnan",23.12,104.84,1700,"MF997638","MF997639","MF997700","MF997701","MF997756","MF997757","MF997816","MF997817","MF997872","MF997873","MF997934","MF997935","MF997992","MF997993","MF998052","MF998053"]
["C5","Central China","Meitan, Guizhou",27.54,107.42,1060,"MF997618","MF997619","MF997678","MF997679","MF997736","MF997737","—","—","MF997852","MF997853","MF997912","MF997913","MF997970","MF997971","MF998030","MF998031"]
["C6","Central China","Mt. Jinfo, Chongqing",28.11,107.32,1172,"MF997662","MF997663","MF997720","MF997721","MF997780","MF997781","MF997836","MF997837","MF997896","MF997897","MF997954","MF997955","MF998014","MF998015","MF998074","MF998075"]
["C7","Central China","Mt. Jinfo, Chongqing",28.11,107.32,1172,"MF997614","MF997615","MF997674","MF997675","MF997732","MF997733","MF997792","MF997793","MF997848","MF997849","MF997908","MF997909","MF997966","MF997967","MF998026","MF998027"]
["C8","Central China","Mt. Jinfo, Chongqing",28.11,107.32,1172,"MF997648","MF997649","MF997708","MF997709","MF997764","MF997765","MF997826","MF997827","MF997882","MF997883","MF997944","MF997945","MF998002","MF998003","MF998062","MF998063"]
["C9","Central China","Pengshui, Chongqing",29.31,108.16,589,"MF997640","MF997641","MF997682","MF997683","MF997758","MF997759","MF997818","MF997819","MF997874","MF997875","MF997936","MF997937","MF997994","MF997995","MF998054","MF998055"]
["C10","Central China","Xingshan, Hubei",31.43,110.69,644,"MF997620","MF997621","MF997680","MF997681","MF997738","MF997739","MF997796","MF997797","MF997854","MF997855","MF997914","MF997915","MF997972","MF997973","MF998032","MF998033"]
["C11","Central China","Jishou, Hunan",28.34,{"v":109.6,"d":"109.60"},300,"MF997622","MF997623","MF997684","MF997685","MF997740","MF997741","MF997798","MF997799","MF997856","MF997857","MF997916","MF997917","MF997974","MF997975","MF998034","MF998035"]
["C12","Central China","Jishou, Hunan",28.34,{"v":109.6,"d":"109.60"},300,"MF997612","MF997613","MF997672","MF997673","MF997730","MF997731","MF997790","MF997791","MF997846","MF997847","MF997906","MF997907","MF997964","MF997965","MF998024","MF998025"]
["HN","Hainan Island","Jianfengling, Hainan",18.68,108.77,520,"MF997650","MF997651","MF997710","MF997711","MF997766","MF997767","MF997828","MF997829","MF997884","MF997885","—","—","MF998004","MF998005","MF998064","MF998065"]
["SW1","Southwest China","Yongzhou, Hunan",26.18,111.45,164,"MF997624","MF997625","MF997686","MF997687","MF997742","MF997743","MF997800","MF997801","MF997858","MF997859","MF997918","MF997919","MF997976","MF997977","MF998036","MF998037"]
["SW2","Southwest China","Nandan, Guangxi",24.98,107.54,280,"MF997626","MF997627","MF997688","MF997689","MF997744","MF997745","MF997802","MF997803","MF997860","MF997861","MF997920","MF997921","MF997978","MF997979","MF998038","MF998039"]
["SW3","Southwest China","Guilin, Guangxi",25.08,{"v":110.3,"d":"110.30"},170,"MF997628","MF997629","MF997690","MF997691","MF997746","MF997747","MF997804","MF997805","MF997862","MF997863","MF997922","MF997923","MF997980","MF997981","MF998040","MF998041"]
["SW4","Southwest China","Leye, Guangxi",24.79,106.56,996,"MF997630","MF997631","MF997692","MF997693","MF997748","MF997749","MF997806","MF997807","MF997864","MF997865","MF997924","MF997925","MF997982","MF997983","MF998042","MF998043"]
["SW5","Southwest China","Leye, Guangxi",24.79,106.56,996,"MF997632","MF997633","MF997696","MF997697","MF997750","MF997751","MF997810","MF997811","MF997866","MF997867","MF997928","MF997929","MF997986","MF997987","MF998046","MF998047"]
["SW6","Southwest China","Longsheng, Guangxi",25.62,109.91,870,"MF997634","MF997635","—","—","MF997752","MF997753","MF997812","MF997813","MF997868","MF997869","MF997930","MF997931","MF997988","MF997989","MF998048","MF998049"]