Table S6: List of DEGs in Reg and green Chinese kale Gene ID G-1 G-2 G-3 R-1 R-2 R-3 Bo2g150030 36.238792 36.421181 39.738194 83.828468 95.570053 97.564568 Bo9g030980 3.664422 3.725527 2.926418 0.871754 0.470217 0.246083 Bo3g170480 0.985784 1.554022 1.407973 4.429939 4.483246 4.549226 Bo1g037300 4.300461 3.607363 4.164406 1.485054 1.631332 1.585466 Bo8g050230 2.084101 1.831161 1.072093 0.537558 0.44192 0.73699 Brassica_oleracea_newGene_2809 2.811522 2.766115 1.696583 0 0 0 Bo2g167720 11.142574 12.042542 12.298042 0.384065 0.478573 0.657239 Brassica_oleracea_newGene_2805 1.811276 1.310184 1.494519 0 0 0 Bo9g018170 0.764833 0.959707 0.737929 2.340319 2.349971 2.251818 Bo5g027450 2.15308 1.91454 2.046464 0.757958 0.531155 0.538797 Bo2g006700 15.613357 14.664157 17.145597 0 0 0 Bo01895s010 0.638116 0.462204 0.793531 6.041725 5.268814 5.214114 Bo2g075160 3.564435 3.0516 2.850622 9.453662 11.322496 9.404052 Bo5g018170 23.259027 23.922272 23.004774 7.718517 10.207777 8.352884 Bo4g173290 8.145622 9.53867 9.340881 21.586739 19.199928 18.06723 Bo1g031850 0.160312 0.029894 0.158098 0.83818 0.560497 0.601489 Bo9g085810 123.406525 125.582268 115.026482 60.45116 56.128654 55.403706 Bo5g058460 1.040924 0.501004 0.411438 2.476461 1.923031 2.013294 Bo1g129730 3.240622 3.346386 2.509935 0.223299 0.527644 0.53154 Bo1g154790 0.380212 0.417613 0.343952 0 0 0 Bo1g019540 13.532411 15.89548 13.240367 7.354915 4.844065 7.702924 Bo9g151640 10.434524 7.749429 7.977482 5.086296 4.808908 2.374977 Bo1g124840 4.315177 4.722588 3.687538 0.571186 0.275628 0.275487 Bo7g101030 0.852522 1.022415 0.740021 0.073479 0.118584 0.044626 Bo2g093180 6.075848 5.792146 3.761431 0 0 0 Bo1g098840 0.442703 0.431436 0.403293 0 0 0 Brassica_oleracea_newGene_4777 8.658101 9.802456 9.277842 0 0 0 Bo2g055860 4.828525 8.044161 7.963981 2.956725 1.592366 2.493851 Brassica_oleracea_newGene_6950 6.638185 3.29919 4.307139 1.485557 1.313651 2.068842 Bo9g009770 0.192455 0.092342 0.496604 2.669968 3.508701 2.858268 Bo1g014970 5.789563 5.455502 5.078024 33.728436 38.462456 38.667233 Bo7g091240 2.681744 2.712709 1.98336 0.832378 0.48619 0.709745 Bo3g052990 0 0 0 11.803375 11.676021 10.501618 Bo4g085100 40.785088 36.108704 39.797188 6.078723 3.583264 3.508766 Bo7g011310 2.439885 1.300632 2.790295 9.985585 14.819998 11.804409 Brassica_oleracea_newGene_3209 1.49877 0.919401 1.242549 0.323187 0.304428 0 Bo3g001880 5.444509 4.992576 5.010602 1.43697 1.420508 1.480277 Bo7g097500 2.022292 1.331483 1.651027 0 0 0 Bo3g052650 7.033725 6.716739 7.443768 0.661259 1.712645 1.270065 Bo1g080120 2.201759 2.429939 2.770324 4.225249 5.78705 5.18501 Bo5g017840 0.32449 0.053048 0.084013 3.071504 3.617059 3.370459 Bo2g136330 2.572953 3.604097 2.737361 1.005832 0.748167 1.008072 Bo3g003950 0 0 0.138982 31.820539 27.236616 22.265553 Bo7g014850 0.307841 0.366301 0.529295 0.911503 1.09521 0.751763 Brassica_oleracea_newGene_1112 2.139767 1.028334 1.288076 0 0 0 Bo4g124020 86.399529 84.149521 83.234184 26.425644 25.6113 26.18236 Bo3g037400 1.909696 1.464878 1.410661 0 0 0 Bo3g170730 2.087894 0.852549 1.066413 0.086887 0.043262 0 Bo5g049090 0.314121 1.560055 0.726425 15.950336 13.374597 15.709308 Bo3g078740 4.868785 2.200378 3.207805 0.215713 0.517645 1.358253 Bo00615s200 11.952209 15.007531 18.733768 4.36389 5.797035 5.808552 Bo02912s010 1.178771 0.964835 0.673714 1.789091 2.296615 2.215168 Bo5g122610 0 0 0.113317 37.484409 39.903046 45.400322 Brassica_oleracea_newGene_2804 7.617748 8.527726 8.062549 152.449921 145.501526 143.454697 Bo4g111160 0.16031 0.218782 0.170388 1.456005 1.189785 1.701934 Bo9g103650 1.967096 2.057496 2.024356 0.907389 0.901149 0.956844 Bo2g002660 2.117255 1.179851 1.717331 0.412765 0.151331 0.101408 Bo2g052710 0.391503 0.63356 0.620225 1.738683 1.565347 1.415849 Bo02178s010 12.142851 11.916439 8.623985 0 0 0 Bo3g018380 2.581823 2.381886 2.881513 0 0 0 Bo1g049590 6.735756 8.214178 6.128335 0 0 0 Bo1g026920 1.806607 1.028661 1.849681 0.251112 0.158686 0.310408 Bo7g048280 8.248949 3.546675 4.524225 1.510947 1.729494 3.334226 Brassica_oleracea_newGene_954 7.328915 7.935763 8.700032 2.559242 1.698554 2.054086 Brassica_oleracea_newGene_951 3.974614 2.146062 2.44618 8.044824 8.042465 8.116371 Bo3g003410 0.884445 0.752912 0.810628 0.029389 0.147169 0 Bo4g127190 1.571811 1.423881 0.699462 0 0 0 Brassica_oleracea_newGene_1471 3.153197 3.354515 2.418507 0 0 0 Bo5g065700 53.030514 44.571972 46.927151 21.411068 21.963345 18.981482 Bo4g076740 85.340523 85.667427 81.976402 27.055466 29.537107 25.397461 Bo1g037400 11.03012 7.351413 9.918396 3.063684 1.751075 1.938373 Bo7g061530 0.627465 0.771701 0.673442 0.024863 0.134183 0.219332 Bo5g108470 0 0 0 3.401392 3.170008 2.231827 Bo01038s010 5.817381 4.439048 5.924825 0 0.071724 0 Bo7g108980 19.289467 21.653759 20.424377 0.937462 1.651494 1.291188 Bo01202s020 0.802031 0.925307 0.757226 0 0 0 Bo5g133000 1.8056 1.629035 2.041461 0.74353 0.411353 0.305055 Bo4g098320 0 0.101497 0.093004 2.935325 2.624381 2.768125 Bo8g112580 8.726942 8.381147 7.836446 18.47238 16.886686 21.525209 Bo3g036020 3.687009 2.662261 4.025506 0.749573 0.170217 0.44809 Bo6g119700 24.596256 24.686068 23.47555 11.191387 11.900018 12.480292 Bo3g034880 0.326285 0.716716 1.211955 1.561928 1.90162 2.663521 Bo1g128470 5.113517 6.101844 7.468455 2.771526 2.628316 2.792589 Brassica_oleracea_newGene_549 12.317595 10.059022 10.852281 0 0 0 Bo6g099320 6.966106 4.574369 4.667828 0 0 0 Brassica_oleracea_newGene_1532 1.090374 2.147852 2.184875 0 0 0 Bo17166s010 9.665702 8.330241 7.998087 32.343731 23.303762 29.07099 Bo9g120190 3.70682 3.343575 3.949974 0.572589 0.52735 0.412017 Bo3g001690 2.301514 1.800384 1.272927 4.830797 6.069286 4.757418 Bo1g138910 0.735861 0.67474 0.726033 4.318157 5.297534 7.555936 Bo3g065560 0.428638 0.612891 0.663192 1.160704 1.770118 1.697214 Bo4g122800 18.956278 19.270962 14.137797 0.307282 0.35938 0 Bo00828s060 42.773087 48.006599 40.436806 136.089111 163.541473 148.035461 Bo7g087510 2.249476 2.115315 2.155958 4.678603 5.260425 4.566164 Bo6g112420 14.139821 13.663751 11.724625 1.911477 1.934874 2.229807 Bo6g026180 2.436104 1.70201 1.787379 0.351616 0.224784 0.471523 Bo2g146410 23.248302 25.860434 21.875067 58.827324 61.205086 64.051117 Bo2g158710 49.765514 57.888203 55.589645 24.904875 27.954592 27.685101 Brassica_oleracea_newGene_3827 18.484215 19.368551 16.797895 0.628476 0.740728 0.536907 Brassica_oleracea_newGene_3823 3.193779 2.923182 3.61732 0 0 0 Brassica_oleracea_newGene_3829 12.915778 13.507782 14.93162 0 0.058683 0 Bo8g066740 6.021398 7.052477 6.43652 3.408603 2.410652 1.87575 Bo1g053760 6.1889 9.902256 10.03536 2.077854 1.983092 2.478579 Bo2g155090 0 0 0 8.821431 6.60044 13.246961 Brassica_oleracea_newGene_5303 3.359005 3.774919 4.189022 12.248489 10.545201 13.086305 Brassica_oleracea_newGene_3799 0 0 0 5.24277 2.970684 3.462123 Bo6g066320 0.081832 0 0.149582 1.924849 1.816339 1.554619 Brassica_oleracea_newGene_3793 3.875743 4.156758 3.892235 0 0 0 Bo9g084610 4.592124 5.979027 5.000428 0 0 0 Bo7g089370 8.980436 8.100285 7.87546 20.768009 17.371279 21.020441 Bo9g163720 0.376618 0.365018 0.387497 2.56172 1.424286 1.442691 Bo6g099860 1.377996 2.289923 2.350994 0 0 0 Bo3g068840 0.177011 0 0 8.431392 10.625506 10.24865 Bo6g067630 0.550925 0.396028 0.71341 0 0 0.033794 Bo3g018920 5.121481 3.73186 3.92258 50.319893 53.544182 45.396584 Brassica_oleracea_newGene_7230 123.389549 124.741959 125.867241 0 0 0 Bo8g054710 3.736684 5.544658 3.796147 14.760725 14.937998 15.47623 Bo00954s010 12.805584 8.765791 11.867161 46.487843 38.720325 42.410191 Bo3g014010 18.47053 20.091536 16.805426 7.621382 5.424284 4.305284 Bo1g034480 0 0 0.085142 20.349829 21.653669 18.424667 Bo7g011290 6.657883 5.878458 5.083967 0.954857 0.828599 1.921554 Bo1g131070 0.567372 0.432883 0.273565 5.574134 5.089109 5.24947 Brassica_oleracea_newGene_6546 2.313878 2.835664 3.327179 0 0.074923 0 Brassica_oleracea_newGene_6541 33.194626 29.643124 31.640795 12.897987 12.792322 13.380579 Bo6g117880 3.28342 2.105902 1.645051 0.190552 0.093822 0.587043 Bo8g050000 6.719283 8.256197 6.664181 0.799198 0.829225 0.776109 Bo2g168260 0 0 0 24.761599 24.754704 29.343229 Bo1g009890 51.632328 51.419907 47.943913 21.283236 21.311413 22.220432 Bo2g098740 11.836766 14.19909 16.285139 2.327323 1.700863 1.448644 Brassica_oleracea_newGene_5892 20.970733 22.416749 22.173668 0 0 0 Bo01362s010 0 0 0 44.467682 43.650528 41.46825 Brassica_oleracea_newGene_3073 16.858702 17.208249 15.530991 0.028784 0 0 Brassica_oleracea_newGene_3074 20.2024 20.59687 21.229795 0 0.10079 0 Bo2g059010 0.419913 0.851293 0.898628 2.125079 2.029521 2.274014 Bo5g041110 1.420629 0.899142 1.195098 0.40831 0.241698 0.433631 Brassica_oleracea_newGene_8326 0 0 0 20.600476 18.05056 19.819933 Bo7g116080 0 0 0 7.526326 7.277812 6.103065 Bo3g185810 13.54161 12.622929 11.723854 25.444082 26.022106 26.693281 Bo2g132210 13.95374 10.504089 10.941983 35.21315 32.622139 41.322727 Bo5g015010 0.8662 0.949623 0.914555 1.93194 1.77458 2.350434 Bo3g037230 8.829035 6.861102 10.445682 0 0 0 Bo3g040470 151.947601 164.34761 159.390533 59.141033 52.558311 51.152706 Bo3g009830 7.08275 7.833914 5.68942 2.930453 2.884229 3.008288 Bo6g039700 74.347771 84.964729 72.666359 314.212708 303.538055 320.183105 Bo4g139210 6.160249 6.261764 7.233597 0 0 0 Bo1g016630 1.102665 1.226841 0.569438 0.367303 0.245805 0.478258 Bo3g013520 0 0 0 1.024566 0.989247 0.803987 Brassica_oleracea_newGene_6439 26.082056 28.15547 29.840088 7.688035 7.563692 7.784714 Bo5g137010 20.816956 17.217165 17.140001 70.186996 57.71315 60.689617 Bo4g173800 1.577736 1.689235 2.481256 0.467512 0.323639 0.512285 Bo2g061230 3.04126 3.112528 2.760094 0.07785 0.128677 0.406717 Bo8g063720 55.969273 66.636971 56.904182 10.554525 7.81149 8.952746 Bo3g034250 3.093906 3.122974 3.467325 1.503705 1.598501 1.371566 Bo8g095980 9.400507 12.097363 10.414861 3.901817 4.408358 4.919646 Bo7g111410 3.474921 7.075991 5.293989 28.670652 24.526245 23.108269 Bo3g034920 4.300672 3.369051 4.373489 2.310609 1.709607 1.743031 Bo9g043700 3.488194 2.589851 2.515578 0 0 0 Bo2g134490 3.886229 1.948118 3.598804 7.082184 5.720122 7.768231 Bo2g024310 19.775677 19.763891 16.571329 46.325348 50.146698 44.895309 Brassica_oleracea_newGene_2639 2.857862 3.828513 1.406894 0 0 0 Bo7g116860 0.225653 0.250807 0.215292 1.721078 2.372955 2.074269 Bo5g126480 0.798029 0.983644 0 5.289909 6.313203 3.587739 Bo1g012050 1.945783 1.885831 1.630035 6.5231 7.203876 4.558025 Bo9g010090 4.914436 6.683171 4.007863 1.519449 1.032568 1.445519 Bo3g022170 20.9993 22.240467 21.069162 9.452719 10.712864 11.272234 Bo6g027680 217.472382 205.068222 211.665054 52.735687 48.098301 47.761791 Bo8g102940 9.129593 9.436499 8.853791 1.304104 1.028858 1.648891 Brassica_oleracea_newGene_8099 0 0 0 4.31175 3.849023 2.366971 Bo7g040460 11.428774 7.815136 12.172254 23.067856 22.053713 23.293367 Bo4g185830 44.386272 45.518959 46.476421 89.724487 99.826317 102.01178 Bo7g050070 2.856925 2.844084 3.136108 9.574066 11.728092 10.546971 Bo7g103870 1.473657 1.502196 1.591931 12.55269 9.006569 9.811197 Bo4g133380 2.720651 3.033958 3.285963 9.718549 9.911671 9.918217 Bo9g161480 8.319927 9.073108 9.336985 75.465446 65.040359 72.303047 Bo02821s010 1.616122 2.180055 1.358594 5.910792 6.440257 8.546466 Bo9g026060 10.416236 10.540969 11.623321 0.609895 0.952953 0.475193 Bo4g115290 49.396175 47.420395 45.614666 14.215997 10.43175 16.232748 Bo1g118970 4.66324 4.880143 4.220147 19.326056 19.553583 19.994307 Bo6g106400 286.15152 274.213959 215.403931 81.018951 111.532005 116.399307 Bo1g119080 0.361337 1.234192 0.93405 5.29812 5.55988 6.145348 Bo1g008770 0 0 0 66.524391 60.822205 57.63604 Bo5g117080 4.385429 3.947885 5.292258 1.6162 1.131587 1.095923 Bo5g023780 25.289375 24.573673 27.173023 9.431653 8.69286 7.274413 Bo2g168280 0 0 0 2.88579 3.812661 3.533075 Bo8g106800 0.028993 0.248523 0.234452 0.553168 0.601042 0.763199 Bo2g068090 2.755532 2.149018 2.775809 5.21097 6.314135 6.514668 Brassica_oleracea_newGene_5516 7.862242 9.779057 7.289117 0 0 0 Bo1g039360 5.555991 5.294668 5.115271 22.96932 21.429098 20.32618 Brassica_oleracea_newGene_2052 5.155899 5.837633 5.18515 0 0 0 Brassica_oleracea_newGene_2059 32.724411 43.124695 35.261417 94.587791 78.902077 86.762833 Bo7g040810 0.148675 0.063472 0 3.452698 3.537438 2.9989 Bo5g001010 210.271439 215.56076 193.259842 35.962086 39.409214 44.035618 Bo9g030950 1.766436 1.807891 3.239839 6.225035 5.516251 6.162062 Bo8g011610 2.969982 3.49078 1.961178 12.829877 16.41633 18.247276 Brassica_oleracea_newGene_4640 10.545383 11.455504 8.165957 0.518411 0.86413 0.441452 Bo2g013030 1.105185 0.734588 1.620275 3.604754 2.700921 4.11644 Brassica_oleracea_newGene_1507 2.174885 1.47087 1.678393 0 0 0 Bo1g034430 1.457303 1.108789 1.420415 3.153975 3.95763 3.961866 Bo9g040750 1.345388 1.185554 1.01482 2.953328 3.420806 3.335603 Bo3g066590 13.671025 11.886436 10.95438 2.716516 3.196594 3.643948 Bo5g134830 1.164732 0.987199 1.244309 0.09697 0.098991 0.140345 Brassica_oleracea_newGene_8480 0.389375 0.030373 0.197962 1.968311 1.399084 1.383228 Bo7g045080 5.903624 4.375828 4.084783 17.03433 13.941147 13.123301 Bo3g031310 172.922668 164.143799 161.774399 48.922581 56.92572 55.053905 Bo02862s010 3.168303 1.017441 3.112807 1.080737 0.803293 1.249227 Bo4g027290 0.519285 0.492682 0.803472 0 0 0 Bo5g038790 6.091344 5.191267 5.154144 1.471563 2.446173 1.543071 Brassica_oleracea_newGene_8155 7.612919 8.032601 6.939555 2.708703 3.210843 3.112637 Brassica_oleracea_newGene_8151 2.224134 2.505911 2.276396 0.276514 0 0.397124 Bo8g052780 8.142985 9.769524 9.807827 4.921415 5.169006 2.615743 Bo3g071930 0 0 0 3.798908 3.232544 4.756276 Brassica_oleracea_newGene_2734 7.044128 7.929016 8.996211 0 0 0 Brassica_oleracea_newGene_2739 0 0.044636 0 5.328781 8.24759 10.047023 Bo2g152940 22.14473 25.267435 27.367964 55.282654 60.652588 73.085258 Bo7g048170 32.307987 29.916098 28.301105 98.632225 106.40538 98.061478 Bo3g009970 98.312836 101.314667 103.832253 188.0923 268.69632 221.42244 Bo3g179580 3.343959 4.608594 3.995867 1.47336 1.15772 1.633712 Bo9g078010 8.958166 8.766567 8.158751 1.659402 1.478512 1.279355 Brassica_oleracea_newGene_1286 59.030139 57.437696 54.984579 0 0 0 Bo6g003500 4.115624 2.374772 3.47236 0.87643 0.522818 0.871449 Bo6g094770 15.166559 16.875584 11.903905 7.573053 4.722936 7.275879 Bo1g017020 12.347579 9.933066 10.446698 5.204205 5.427013 5.438368 Bo4g039200 2.728041 2.446516 1.990643 0.54528 0.554751 0.857088 Bo2g130260 2.807302 2.151303 2.263459 0.543914 0.102282 0.185642 Bo8g036810 10.988891 12.30693 10.877888 63.759529 73.656219 77.049103 Bo01096s010 40.30854 39.223503 38.930138 21.381752 13.031091 20.505152 Bo4g106410 1.457718 1.308752 2.340652 8.923707 7.836263 7.582428 Brassica_oleracea_newGene_6961 5.411297 3.7838 4.627025 0 0 0 Bo3g074560 0.259001 0.425821 0.188423 1.714938 2.199859 2.019853 Bo1g011740 1.136448 1.184677 1.385287 0.315229 0.519586 0.249218 Bo4g045970 27.477554 31.594765 28.620188 7.968786 7.313896 7.744462 Bo5g025270 8.627819 8.322631 9.90543 34.934971 38.501831 37.222652 Bo3g154020 3.333712 4.022009 3.8797 0.630797 0.685357 1.136292 Bo6g080180 0.687631 0.349168 0.447849 1.158595 1.42107 1.309343 Bo7g114280 0.0973 0.131637 0.072408 2.67334 3.079119 2.344244 Bo5g136300 10.73502 8.585238 8.540792 23.097757 20.036047 21.865879 Bo8g090370 14.491755 14.979219 15.818924 49.700695 61.017536 58.554123 Bo4g143770 17.344505 16.544453 17.105757 32.100208 40.438137 37.226788 Bo6g096040 1.148332 1.522565 0.893003 0.282553 0.0885 0.288529 Brassica_oleracea_newGene_8487 9.462714 9.059921 7.912332 4.136824 3.716837 4.968848 Bo3g081280 4.291344 3.387686 3.822343 0.949899 1.922821 0.641139 Bo3g029920 19.571241 16.937748 19.026316 0.546714 0.372453 0.35875 Bo7g117950 6.27224 6.159604 8.016433 16.115177 13.15692 16.538939 Bo2g116700 4.506814 2.915541 3.03961 0 0 0 Bo4g169260 0 0 0 2.687837 3.861329 2.941467 Bo3g066510 2.503497 3.025745 3.61864 1.130414 1.316529 1.082343 Bo1g008570 37.011513 40.498238 38.745449 0 0 0 Bo7g100690 4.348809 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